Query 012095
Match_columns 471
No_of_seqs 313 out of 2765
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 08:34:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012095.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012095hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0436 Aspartate/tyrosine/aro 100.0 7.3E-70 1.6E-74 544.1 45.9 358 95-465 28-392 (393)
2 KOG0257 Kynurenine aminotransf 100.0 1.8E-62 4E-67 466.0 32.1 384 69-459 9-414 (420)
3 PRK07366 succinyldiaminopimela 100.0 2.7E-60 5.9E-65 480.0 44.1 381 68-462 3-388 (388)
4 PLN00175 aminotransferase fami 100.0 1.1E-59 2.4E-64 477.7 45.5 376 67-463 31-412 (413)
5 PRK07681 aspartate aminotransf 100.0 2.7E-59 5.9E-64 474.1 44.0 376 68-460 5-384 (399)
6 PRK13355 bifunctional HTH-doma 100.0 2.6E-59 5.6E-64 487.8 43.5 391 64-466 115-516 (517)
7 PRK08068 transaminase; Reviewe 100.0 1.5E-58 3.3E-63 467.2 44.4 378 68-461 5-386 (389)
8 PRK06107 aspartate aminotransf 100.0 2.7E-58 5.8E-63 467.1 46.3 395 68-465 6-401 (402)
9 PTZ00377 alanine aminotransfer 100.0 4.1E-59 8.9E-64 482.5 40.5 398 67-467 9-478 (481)
10 PRK09276 LL-diaminopimelate am 100.0 2.7E-58 5.9E-63 465.0 44.9 377 68-460 4-384 (385)
11 TIGR03540 DapC_direct LL-diami 100.0 5.9E-58 1.3E-62 462.3 45.2 376 69-460 3-382 (383)
12 PRK06348 aspartate aminotransf 100.0 5.2E-58 1.1E-62 462.4 44.5 375 68-461 6-382 (384)
13 PRK05942 aspartate aminotransf 100.0 8.4E-58 1.8E-62 462.4 45.5 379 67-461 7-389 (394)
14 PRK09147 succinyldiaminopimela 100.0 3.9E-58 8.5E-63 465.3 43.1 373 70-463 3-395 (396)
15 PRK08960 hypothetical protein; 100.0 6.2E-58 1.4E-62 462.4 44.0 380 66-463 3-386 (387)
16 PRK08636 aspartate aminotransf 100.0 7.9E-58 1.7E-62 463.8 44.8 384 70-466 8-402 (403)
17 PLN00145 tyrosine/nicotianamin 100.0 1.3E-57 2.8E-62 464.2 44.6 364 94-468 51-428 (430)
18 PRK06207 aspartate aminotransf 100.0 1.2E-57 2.6E-62 462.1 43.7 358 95-466 39-404 (405)
19 PRK06855 aminotransferase; Val 100.0 8.7E-58 1.9E-62 466.5 41.2 381 80-465 17-430 (433)
20 PRK09148 aminotransferase; Val 100.0 3.7E-57 8E-62 458.8 45.4 384 69-465 4-391 (405)
21 PLN02187 rooty/superroot1 100.0 3.3E-57 7.1E-62 464.3 43.5 366 93-468 64-442 (462)
22 PRK07682 hypothetical protein; 100.0 5.6E-57 1.2E-61 454.4 43.7 356 95-466 20-378 (378)
23 PLN00143 tyrosine/nicotianamin 100.0 7.4E-57 1.6E-61 456.9 42.9 366 92-468 29-408 (409)
24 PRK07337 aminotransferase; Val 100.0 1.2E-56 2.6E-61 453.4 43.6 381 68-462 3-387 (388)
25 PRK06290 aspartate aminotransf 100.0 2.6E-56 5.6E-61 451.9 44.9 376 77-466 24-407 (410)
26 PLN02656 tyrosine transaminase 100.0 1.9E-56 4.2E-61 454.1 43.5 365 92-467 28-406 (409)
27 PRK07324 transaminase; Validat 100.0 3.4E-57 7.4E-62 454.1 37.0 352 90-466 21-372 (373)
28 TIGR03538 DapC_gpp succinyldia 100.0 1.8E-56 4E-61 452.6 42.4 370 71-461 3-392 (393)
29 PRK05764 aspartate aminotransf 100.0 5.1E-56 1.1E-60 449.9 44.7 390 66-465 2-392 (393)
30 PRK08361 aspartate aminotransf 100.0 4.6E-56 9.9E-61 449.5 43.9 379 68-464 10-390 (391)
31 PRK06108 aspartate aminotransf 100.0 4.8E-56 1.1E-60 448.4 43.8 373 72-463 5-381 (382)
32 PRK12414 putative aminotransfe 100.0 4.7E-56 1E-60 448.0 43.6 351 94-460 28-383 (384)
33 PRK08912 hypothetical protein; 100.0 4.8E-56 1E-60 448.8 43.5 377 69-464 5-386 (387)
34 PTZ00433 tyrosine aminotransfe 100.0 7.3E-56 1.6E-60 450.5 42.6 363 93-466 31-410 (412)
35 PRK09082 methionine aminotrans 100.0 1.5E-55 3.2E-60 444.8 42.4 372 69-460 9-385 (386)
36 PRK07590 L,L-diaminopimelate a 100.0 1.2E-55 2.7E-60 448.6 42.0 363 78-462 15-409 (409)
37 PRK07683 aminotransferase A; V 100.0 4E-55 8.6E-60 441.7 44.5 376 68-464 5-383 (387)
38 PRK08363 alanine aminotransfer 100.0 4.4E-55 9.5E-60 443.3 44.1 381 69-465 5-395 (398)
39 PRK07309 aromatic amino acid a 100.0 5.9E-55 1.3E-59 441.0 44.2 379 67-466 6-390 (391)
40 PRK05957 aspartate aminotransf 100.0 8E-55 1.7E-59 439.8 44.9 379 67-466 3-387 (389)
41 PRK05839 hypothetical protein; 100.0 4.5E-55 9.8E-60 439.1 42.1 358 76-463 4-373 (374)
42 PRK07550 hypothetical protein; 100.0 8.7E-55 1.9E-59 439.5 44.4 378 68-461 2-384 (386)
43 TIGR01264 tyr_amTase_E tyrosin 100.0 4.7E-55 1E-59 443.5 42.6 374 80-465 16-400 (401)
44 PRK07568 aspartate aminotransf 100.0 3.5E-54 7.6E-59 437.0 45.3 380 68-466 3-394 (397)
45 PLN02231 alanine transaminase 100.0 6E-55 1.3E-59 452.0 39.8 367 95-466 129-529 (534)
46 PRK07777 aminotransferase; Val 100.0 2.7E-54 5.8E-59 436.1 43.5 374 71-463 5-385 (387)
47 PRK08175 aminotransferase; Val 100.0 5.8E-54 1.3E-58 434.5 44.1 374 76-465 10-390 (395)
48 TIGR01265 tyr_nico_aTase tyros 100.0 1.5E-53 3.3E-58 432.5 44.0 375 79-464 15-401 (403)
49 PRK09265 aminotransferase AlaT 100.0 1.3E-53 2.7E-58 433.4 43.3 385 70-466 8-403 (404)
50 TIGR03537 DapC succinyldiamino 100.0 7.3E-54 1.6E-58 427.0 40.7 342 97-460 2-349 (350)
51 KOG0259 Tyrosine aminotransfer 100.0 1.7E-53 3.7E-58 397.4 38.8 362 94-466 60-435 (447)
52 PLN02450 1-aminocyclopropane-1 100.0 2.9E-54 6.2E-59 443.2 35.9 361 96-466 39-432 (468)
53 PRK09275 aspartate aminotransf 100.0 8.5E-54 1.8E-58 437.5 36.2 357 96-465 101-518 (527)
54 PLN02368 alanine transaminase 100.0 1.3E-53 2.7E-58 429.8 31.1 329 67-397 10-396 (407)
55 PLN02376 1-aminocyclopropane-1 100.0 4.1E-53 8.9E-58 436.0 35.4 363 96-466 47-440 (496)
56 PRK15481 transcriptional regul 100.0 7.8E-53 1.7E-57 430.9 36.9 342 94-463 84-430 (431)
57 COG1167 ARO8 Transcriptional r 100.0 2.8E-52 6E-57 426.4 40.0 353 95-466 89-457 (459)
58 TIGR03542 DAPAT_plant LL-diami 100.0 5.4E-52 1.2E-56 421.0 41.5 367 71-461 6-401 (402)
59 PRK07865 N-succinyldiaminopime 100.0 8.4E-52 1.8E-56 414.5 40.8 355 67-459 2-363 (364)
60 COG1168 MalY Bifunctional PLP- 100.0 1.1E-51 2.4E-56 388.7 38.6 355 95-465 25-387 (388)
61 PTZ00376 aspartate aminotransf 100.0 9.1E-53 2E-57 426.7 33.1 367 70-463 6-402 (404)
62 PLN02607 1-aminocyclopropane-1 100.0 2E-52 4.3E-57 426.5 35.3 361 96-466 48-439 (447)
63 TIGR03539 DapC_actino succinyl 100.0 1.7E-51 3.7E-56 411.0 40.6 348 76-458 2-356 (357)
64 PRK09257 aromatic amino acid a 100.0 8.2E-52 1.8E-56 419.0 34.8 364 71-461 4-395 (396)
65 TIGR03801 asp_4_decarbox aspar 100.0 2.3E-51 5.1E-56 419.0 36.7 358 96-466 95-518 (521)
66 PRK06836 aspartate aminotransf 100.0 6E-50 1.3E-54 404.9 44.9 346 94-466 32-393 (394)
67 PRK14809 histidinol-phosphate 100.0 2E-50 4.3E-55 403.5 36.6 337 85-463 20-356 (357)
68 PLN02672 methionine S-methyltr 100.0 2.8E-50 6.2E-55 434.1 40.1 363 93-463 695-1079(1082)
69 PLN02397 aspartate transaminas 100.0 1.3E-50 2.8E-55 412.2 34.9 365 70-463 25-420 (423)
70 PRK02610 histidinol-phosphate 100.0 3.8E-50 8.3E-55 403.5 36.8 336 96-466 29-373 (374)
71 PRK01533 histidinol-phosphate 100.0 2.3E-50 4.9E-55 403.1 33.3 333 93-468 27-359 (366)
72 PRK09440 avtA valine--pyruvate 100.0 9.4E-50 2E-54 406.8 38.3 353 95-467 30-414 (416)
73 PF00155 Aminotran_1_2: Aminot 100.0 6.3E-51 1.4E-55 408.3 27.3 346 96-458 2-363 (363)
74 PRK06358 threonine-phosphate d 100.0 2E-49 4.3E-54 395.3 37.7 332 95-462 19-353 (354)
75 PLN03026 histidinol-phosphate 100.0 6.6E-49 1.4E-53 394.9 35.1 353 68-460 24-378 (380)
76 PRK03158 histidinol-phosphate 100.0 5.5E-49 1.2E-53 393.6 33.0 330 95-461 29-358 (359)
77 PRK08056 threonine-phosphate d 100.0 2.9E-48 6.2E-53 387.5 37.1 339 88-463 13-354 (356)
78 PRK07392 threonine-phosphate d 100.0 4.2E-48 9.2E-53 387.0 37.4 328 95-458 22-356 (360)
79 PRK03317 histidinol-phosphate 100.0 5.8E-48 1.3E-52 387.3 35.9 334 96-464 27-364 (368)
80 PRK06225 aspartate aminotransf 100.0 5.9E-47 1.3E-51 381.6 41.9 366 74-467 8-379 (380)
81 PRK05166 histidinol-phosphate 100.0 7.6E-48 1.6E-52 386.6 34.2 333 93-461 34-368 (371)
82 PRK08637 hypothetical protein; 100.0 2.4E-47 5.1E-52 385.2 35.8 350 97-466 5-388 (388)
83 COG0079 HisC Histidinol-phosph 100.0 2.1E-47 4.6E-52 375.6 34.4 330 96-464 23-354 (356)
84 PRK05387 histidinol-phosphate 100.0 3.6E-47 7.9E-52 379.6 35.5 328 95-463 24-352 (353)
85 PRK08153 histidinol-phosphate 100.0 5.8E-47 1.3E-51 379.7 36.7 337 92-466 28-367 (369)
86 KOG0634 Aromatic amino acid am 100.0 2.2E-47 4.8E-52 362.6 31.6 331 126-465 94-467 (472)
87 PRK02731 histidinol-phosphate 100.0 3.4E-47 7.3E-52 381.8 34.7 336 93-463 30-365 (367)
88 PRK09105 putative aminotransfe 100.0 5E-47 1.1E-51 379.7 34.7 325 95-462 43-368 (370)
89 PRK04870 histidinol-phosphate 100.0 1.5E-46 3.2E-51 375.5 34.7 327 94-461 25-355 (356)
90 PRK01688 histidinol-phosphate 100.0 1.1E-46 2.4E-51 375.1 30.3 320 96-458 29-350 (351)
91 PRK14807 histidinol-phosphate 100.0 1.6E-45 3.5E-50 367.0 36.4 324 96-461 23-349 (351)
92 PRK04781 histidinol-phosphate 100.0 1.1E-45 2.5E-50 369.5 33.5 325 96-461 32-360 (364)
93 PRK06425 histidinol-phosphate 100.0 1.7E-45 3.8E-50 363.9 33.1 313 96-462 17-331 (332)
94 PRK07908 hypothetical protein; 100.0 8.5E-45 1.8E-49 361.7 36.3 324 94-463 21-346 (349)
95 PRK14808 histidinol-phosphate 100.0 4.4E-45 9.5E-50 361.0 32.8 316 93-460 17-333 (335)
96 PRK00950 histidinol-phosphate 100.0 9.3E-45 2E-49 363.4 34.5 326 93-462 32-360 (361)
97 TIGR01141 hisC histidinol-phos 100.0 8.2E-45 1.8E-49 361.7 32.5 326 95-458 19-345 (346)
98 PRK04635 histidinol-phosphate 100.0 8.5E-45 1.8E-49 362.2 32.3 320 95-460 31-351 (354)
99 PRK03321 putative aminotransfe 100.0 3.3E-44 7.2E-49 358.0 32.9 328 96-463 23-350 (352)
100 KOG0256 1-aminocyclopropane-1- 100.0 3.2E-44 7E-49 338.2 29.4 332 126-466 115-463 (471)
101 PRK06959 putative threonine-ph 100.0 7E-44 1.5E-48 352.8 33.4 311 96-466 25-335 (339)
102 PRK05664 threonine-phosphate d 100.0 2E-43 4.3E-48 348.7 34.3 305 96-464 21-328 (330)
103 PRK03967 histidinol-phosphate 100.0 3.2E-43 6.9E-48 348.3 34.0 318 94-465 17-335 (337)
104 TIGR01140 L_thr_O3P_dcar L-thr 100.0 5.4E-43 1.2E-47 345.8 32.1 320 86-458 8-329 (330)
105 PRK08354 putative aminotransfe 100.0 2.4E-42 5.2E-47 338.4 34.1 299 96-459 9-307 (311)
106 PRK13238 tnaA tryptophanase/L- 100.0 5.6E-41 1.2E-45 342.1 35.9 367 71-463 12-432 (460)
107 cd00609 AAT_like Aspartate ami 100.0 9.3E-38 2E-42 310.7 40.3 345 98-459 1-349 (350)
108 COG3977 Alanine-alpha-ketoisov 100.0 7.2E-37 1.6E-41 277.4 31.6 367 79-466 15-413 (417)
109 KOG0258 Alanine aminotransfera 100.0 3.2E-37 7E-42 288.8 26.1 351 110-465 88-470 (475)
110 TIGR03576 pyridox_MJ0158 pyrid 100.0 1.1E-35 2.3E-40 293.8 35.4 309 105-462 30-345 (346)
111 cd00617 Tnase_like Tryptophana 100.0 4E-36 8.7E-41 302.3 31.7 352 87-464 3-408 (431)
112 PRK06939 2-amino-3-ketobutyrat 100.0 3.9E-35 8.4E-40 297.5 34.7 336 93-466 40-395 (397)
113 PLN02822 serine palmitoyltrans 100.0 2.6E-35 5.6E-40 303.1 33.4 351 93-466 107-479 (481)
114 TIGR01822 2am3keto_CoA 2-amino 100.0 1.2E-34 2.7E-39 293.5 35.5 333 93-466 36-391 (393)
115 TIGR00858 bioF 8-amino-7-oxono 100.0 3.4E-34 7.3E-39 286.7 34.7 331 92-459 13-360 (360)
116 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.5E-34 1.4E-38 287.5 35.6 337 92-465 30-382 (385)
117 COG1448 TyrB Aspartate/tyrosin 100.0 1.8E-33 3.9E-38 265.7 27.9 362 70-461 3-395 (396)
118 PRK10534 L-threonine aldolase; 100.0 9.1E-34 2E-38 280.7 27.3 318 97-463 1-332 (333)
119 KOG0633 Histidinol phosphate a 100.0 5.7E-34 1.2E-38 253.8 21.6 332 92-461 38-374 (375)
120 PRK05958 8-amino-7-oxononanoat 100.0 2.1E-32 4.6E-37 276.3 34.7 334 92-462 36-385 (385)
121 PRK13392 5-aminolevulinate syn 100.0 3.7E-32 8E-37 276.6 34.0 333 94-466 45-399 (410)
122 PRK10874 cysteine sulfinate de 100.0 1.8E-31 4E-36 270.9 36.0 333 96-465 19-399 (401)
123 TIGR03392 FeS_syn_CsdA cystein 100.0 2E-31 4.3E-36 270.4 34.7 333 96-465 16-396 (398)
124 PRK02627 acetylornithine amino 100.0 1.1E-31 2.3E-36 272.3 32.4 338 93-465 37-395 (396)
125 PLN02483 serine palmitoyltrans 100.0 1.7E-31 3.6E-36 275.5 33.9 336 94-466 99-468 (489)
126 PLN02721 threonine aldolase 100.0 2E-31 4.4E-36 266.1 32.3 328 97-464 7-352 (353)
127 cd06454 KBL_like KBL_like; thi 100.0 8.6E-31 1.9E-35 261.0 33.9 330 96-461 2-348 (349)
128 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 4.2E-31 9.1E-36 265.0 30.3 297 135-465 54-369 (370)
129 TIGR00707 argD acetylornithine 100.0 6.9E-31 1.5E-35 264.8 31.4 332 93-461 25-378 (379)
130 TIGR01821 5aminolev_synth 5-am 100.0 1.7E-30 3.7E-35 263.8 34.3 338 94-466 44-398 (402)
131 TIGR01979 sufS cysteine desulf 100.0 3.4E-30 7.4E-35 261.9 35.4 335 93-465 15-402 (403)
132 PRK09064 5-aminolevulinate syn 100.0 2.9E-30 6.3E-35 262.6 34.6 338 94-467 45-400 (407)
133 PRK01278 argD acetylornithine 100.0 2.8E-30 6.1E-35 261.1 33.1 336 93-464 29-388 (389)
134 PRK07179 hypothetical protein; 100.0 1.2E-29 2.7E-34 257.8 34.9 333 93-466 52-400 (407)
135 cd06502 TA_like Low-specificit 100.0 2.4E-30 5.2E-35 256.7 28.4 315 105-460 6-337 (338)
136 PRK09295 bifunctional cysteine 100.0 1.5E-29 3.3E-34 257.2 34.2 331 95-463 22-403 (406)
137 PLN02855 Bifunctional selenocy 100.0 2.8E-29 6E-34 256.6 35.6 337 94-466 30-420 (424)
138 cd06451 AGAT_like Alanine-glyo 100.0 1.7E-29 3.7E-34 252.5 33.2 321 108-463 9-356 (356)
139 cd00378 SHMT Serine-glycine hy 100.0 1.9E-29 4.1E-34 256.3 32.9 338 95-465 19-386 (402)
140 PRK03244 argD acetylornithine 100.0 9.4E-30 2E-34 258.1 30.4 331 93-466 41-396 (398)
141 cd00613 GDC-P Glycine cleavage 100.0 1.2E-29 2.6E-34 257.5 30.9 330 94-458 19-398 (398)
142 PRK13393 5-aminolevulinate syn 100.0 1.5E-28 3.3E-33 249.7 36.5 336 94-465 44-397 (406)
143 TIGR01976 am_tr_V_VC1184 cyste 100.0 6.6E-29 1.4E-33 252.0 32.7 329 97-458 18-397 (397)
144 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.8E-29 1.9E-33 247.7 33.0 297 134-462 46-360 (361)
145 PRK00451 glycine dehydrogenase 100.0 9.7E-29 2.1E-33 254.3 32.2 328 96-462 69-446 (447)
146 PRK02948 cysteine desulfurase; 100.0 7.9E-29 1.7E-33 250.0 28.5 336 98-469 2-379 (381)
147 cd00610 OAT_like Acetyl ornith 100.0 9.3E-29 2E-33 252.2 29.2 347 93-462 34-413 (413)
148 PRK05093 argD bifunctional N-s 100.0 6.8E-28 1.5E-32 244.6 33.0 333 93-465 38-401 (403)
149 PLN02409 serine--glyoxylate am 100.0 8.2E-28 1.8E-32 243.5 32.5 327 109-468 20-376 (401)
150 PRK02936 argD acetylornithine 100.0 8.9E-28 1.9E-32 241.9 31.2 334 92-462 26-377 (377)
151 PRK07049 methionine gamma-lyas 100.0 1.6E-27 3.4E-32 241.9 32.7 225 126-382 78-315 (427)
152 cd06453 SufS_like Cysteine des 100.0 9.7E-28 2.1E-32 241.4 30.9 313 109-458 11-373 (373)
153 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 2.3E-27 5E-32 236.8 33.2 319 108-461 9-354 (355)
154 PLN03227 serine palmitoyltrans 100.0 1.7E-27 3.7E-32 239.9 32.2 341 98-465 1-383 (392)
155 cd06450 DOPA_deC_like DOPA dec 100.0 3.4E-28 7.3E-33 242.0 26.5 309 110-460 12-344 (345)
156 TIGR03403 nifS_epsilon cystein 100.0 1.1E-27 2.3E-32 241.8 29.8 323 109-466 11-377 (382)
157 COG0156 BioF 7-keto-8-aminopel 100.0 8.3E-27 1.8E-31 229.1 33.9 333 93-461 37-387 (388)
158 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 6.3E-27 1.4E-31 236.1 33.6 341 97-469 20-386 (387)
159 TIGR00713 hemL glutamate-1-sem 100.0 1.4E-27 3E-32 244.0 28.7 348 92-465 45-423 (423)
160 PRK04073 rocD ornithine--oxo-a 100.0 3.3E-27 7.1E-32 239.0 31.2 327 93-462 38-395 (396)
161 PLN02242 methionine gamma-lyas 100.0 1.7E-27 3.7E-32 240.8 27.9 222 130-386 74-304 (418)
162 PRK13479 2-aminoethylphosphona 100.0 9.5E-27 2.1E-31 233.7 32.6 302 136-466 37-365 (368)
163 PRK08247 cystathionine gamma-s 100.0 8.3E-27 1.8E-31 233.1 31.4 288 126-464 47-364 (366)
164 PRK08088 4-aminobutyrate amino 100.0 5E-27 1.1E-31 239.4 30.0 355 92-465 38-424 (425)
165 PRK13520 L-tyrosine decarboxyl 100.0 3E-26 6.6E-31 230.3 35.1 348 83-463 7-370 (371)
166 TIGR02326 transamin_PhnW 2-ami 100.0 1.9E-26 4.1E-31 231.1 32.4 300 134-462 33-360 (363)
167 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-26 2.9E-31 233.3 31.2 328 99-460 2-375 (376)
168 TIGR01437 selA_rel uncharacter 100.0 1.3E-26 2.9E-31 231.2 30.6 308 109-461 25-362 (363)
169 TIGR03402 FeS_nifS cysteine de 100.0 3.7E-26 8E-31 230.3 31.9 319 109-466 11-374 (379)
170 COG0520 csdA Selenocysteine ly 100.0 2.8E-25 6.1E-30 222.3 35.8 331 94-463 20-404 (405)
171 PRK06234 methionine gamma-lyas 100.0 3.2E-26 7E-31 231.1 29.3 220 128-381 58-287 (400)
172 PRK00854 rocD ornithine--oxo-a 100.0 3.6E-26 7.8E-31 232.1 28.8 330 93-463 39-400 (401)
173 PRK12381 bifunctional succinyl 100.0 1.6E-25 3.5E-30 227.1 31.9 342 93-467 37-402 (406)
174 PRK04260 acetylornithine amino 100.0 1.4E-25 3.1E-30 225.6 31.1 332 93-461 27-374 (375)
175 PRK00011 glyA serine hydroxyme 100.0 4.3E-25 9.3E-30 225.3 34.9 336 95-464 25-389 (416)
176 PF12897 Aminotran_MocR: Alani 100.0 4.4E-26 9.6E-31 216.0 25.2 316 125-463 61-414 (425)
177 TIGR03812 tyr_de_CO2_Arch tyro 99.9 1.1E-24 2.3E-29 219.2 34.7 314 111-460 34-372 (373)
178 KOG1412 Aspartate aminotransfe 99.9 1.3E-25 2.8E-30 205.2 23.9 352 92-468 27-409 (410)
179 PRK07505 hypothetical protein; 99.9 1.3E-24 2.9E-29 220.5 34.2 332 93-464 44-399 (402)
180 PLN02955 8-amino-7-oxononanoat 99.9 1.7E-24 3.8E-29 217.4 34.2 330 94-465 101-462 (476)
181 TIGR02006 IscS cysteine desulf 99.9 5.2E-25 1.1E-29 223.5 30.6 327 97-465 4-378 (402)
182 PTZ00125 ornithine aminotransf 99.9 7.6E-25 1.7E-29 222.4 31.8 342 93-466 29-397 (400)
183 PRK14012 cysteine desulfurase; 99.9 5.1E-25 1.1E-29 223.8 30.3 326 97-465 4-380 (404)
184 PRK06767 methionine gamma-lyas 99.9 7.5E-25 1.6E-29 220.4 29.9 285 130-463 59-384 (386)
185 PRK06460 hypothetical protein; 99.9 1.7E-24 3.7E-29 216.8 31.3 217 130-381 43-264 (376)
186 PRK08133 O-succinylhomoserine 99.9 2.1E-24 4.4E-29 217.3 30.9 215 133-382 62-281 (390)
187 TIGR03246 arg_catab_astC succi 99.9 3.6E-24 7.8E-29 216.6 32.4 333 93-465 33-396 (397)
188 PRK08249 cystathionine gamma-s 99.9 2.5E-24 5.4E-29 216.7 30.6 218 130-382 62-284 (398)
189 TIGR02080 O_succ_thio_ly O-suc 99.9 3.6E-24 7.7E-29 214.6 31.0 222 125-382 45-272 (382)
190 PRK08045 cystathionine gamma-s 99.9 6.7E-24 1.4E-28 212.8 32.1 221 126-382 47-273 (386)
191 PLN00144 acetylornithine trans 99.9 3.7E-24 8E-29 215.0 29.9 337 93-465 13-381 (382)
192 PRK07504 O-succinylhomoserine 99.9 6.2E-24 1.3E-28 214.2 30.6 249 96-382 30-286 (398)
193 TIGR02379 ECA_wecE TDP-4-keto- 99.9 2E-23 4.3E-28 208.9 32.9 306 110-462 10-375 (376)
194 PRK07503 methionine gamma-lyas 99.9 8.4E-24 1.8E-28 213.6 30.2 218 130-382 63-287 (403)
195 PRK07810 O-succinylhomoserine 99.9 6.8E-24 1.5E-28 213.9 28.1 222 126-383 65-292 (403)
196 cd00614 CGS_like CGS_like: Cys 99.9 1.1E-23 2.4E-28 211.0 29.4 218 130-382 38-261 (369)
197 TIGR01328 met_gam_lyase methio 99.9 2.1E-23 4.6E-28 209.8 31.2 218 130-382 57-281 (391)
198 PRK04366 glycine dehydrogenase 99.9 3.3E-23 7.1E-28 213.8 32.7 359 83-468 54-452 (481)
199 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.5E-23 3.3E-28 213.4 29.7 354 92-463 30-419 (420)
200 PRK08861 cystathionine gamma-s 99.9 3.3E-23 7.1E-28 207.2 31.3 220 126-381 48-273 (388)
201 PRK08776 cystathionine gamma-s 99.9 5.6E-23 1.2E-27 207.2 32.9 214 134-382 62-281 (405)
202 TIGR03235 DNA_S_dndA cysteine 99.9 4.4E-24 9.5E-29 213.2 24.3 311 108-454 9-348 (353)
203 KOG1411 Aspartate aminotransfe 99.9 9.8E-25 2.1E-29 202.2 17.3 368 69-463 28-424 (427)
204 PRK06918 4-aminobutyrate amino 99.9 5.4E-23 1.2E-27 211.0 31.8 356 92-466 51-445 (451)
205 PRK06777 4-aminobutyrate amino 99.9 3.8E-23 8.3E-28 210.1 30.3 349 92-463 37-420 (421)
206 PRK07811 cystathionine gamma-s 99.9 6.3E-23 1.4E-27 206.3 31.4 218 130-382 59-282 (388)
207 PRK00062 glutamate-1-semialdeh 99.9 1.9E-23 4.1E-28 213.0 27.7 350 92-465 47-425 (426)
208 PRK09792 4-aminobutyrate trans 99.9 8.2E-23 1.8E-27 207.7 32.1 352 92-463 37-420 (421)
209 PRK07582 cystathionine gamma-l 99.9 5.2E-23 1.1E-27 205.5 29.7 217 126-382 46-268 (366)
210 PRK05937 8-amino-7-oxononanoat 99.9 1.5E-22 3.2E-27 203.2 33.0 328 96-467 5-353 (370)
211 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.1E-22 2.4E-27 204.2 31.8 219 130-383 52-275 (380)
212 PLN02651 cysteine desulfurase 99.9 4.1E-23 8.8E-28 207.0 28.1 314 100-452 3-364 (364)
213 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.7E-22 5.9E-27 201.5 33.6 310 111-462 11-374 (375)
214 PLN02624 ornithine-delta-amino 99.9 1.3E-22 2.8E-27 208.9 31.8 335 93-464 73-444 (474)
215 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3E-22 6.4E-27 201.3 33.3 311 111-462 14-377 (379)
216 TIGR01885 Orn_aminotrans ornit 99.9 1.1E-22 2.4E-27 206.4 30.1 332 93-462 35-400 (401)
217 PRK07269 cystathionine gamma-s 99.9 5.8E-23 1.3E-27 204.4 27.1 287 126-462 49-362 (364)
218 PRK09028 cystathionine beta-ly 99.9 3.1E-22 6.7E-27 200.0 31.7 240 106-381 34-280 (394)
219 PRK08574 cystathionine gamma-s 99.9 2.4E-22 5.2E-27 201.6 31.0 217 130-382 51-273 (385)
220 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.5E-22 1.2E-26 197.9 32.7 301 115-459 3-352 (352)
221 PRK07050 cystathionine beta-ly 99.9 1.5E-22 3.2E-27 203.8 28.2 217 130-381 63-285 (394)
222 PRK04612 argD acetylornithine 99.9 7.2E-22 1.6E-26 199.5 32.3 341 92-465 37-404 (408)
223 PRK05968 hypothetical protein; 99.9 7.9E-22 1.7E-26 198.4 29.0 281 133-464 64-386 (389)
224 COG1104 NifS Cysteine sulfinat 99.9 9.9E-22 2.1E-26 190.0 27.0 321 109-467 13-380 (386)
225 PRK08064 cystathionine beta-ly 99.9 2.2E-21 4.8E-26 195.3 30.7 212 134-381 56-273 (390)
226 PRK08360 4-aminobutyrate amino 99.9 6.3E-21 1.4E-25 194.6 34.1 355 92-466 38-428 (443)
227 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 1.6E-21 3.6E-26 198.0 29.1 161 130-318 55-219 (418)
228 TIGR01329 cysta_beta_ly_E cyst 99.9 2.8E-21 6.1E-26 193.7 30.4 290 126-464 39-375 (378)
229 TIGR01324 cysta_beta_ly_B cyst 99.9 3.9E-21 8.4E-26 192.1 30.0 220 126-381 42-269 (377)
230 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.3E-20 2.8E-25 190.0 33.7 310 110-462 9-380 (380)
231 PF00266 Aminotran_5: Aminotra 99.9 3.3E-21 7.1E-26 193.8 29.1 313 108-454 10-371 (371)
232 PRK08248 O-acetylhomoserine am 99.9 8.6E-21 1.9E-25 192.6 30.7 216 132-382 64-317 (431)
233 PRK07495 4-aminobutyrate amino 99.9 1.6E-20 3.4E-25 190.9 32.5 352 92-467 37-424 (425)
234 PLN02509 cystathionine beta-ly 99.9 1.5E-20 3.2E-25 191.2 32.2 224 125-382 124-353 (464)
235 PRK06058 4-aminobutyrate amino 99.9 1.6E-20 3.5E-25 192.2 32.6 351 92-465 53-443 (443)
236 PRK05939 hypothetical protein; 99.9 1.7E-20 3.6E-25 188.8 31.6 211 136-381 51-287 (397)
237 PRK06084 O-acetylhomoserine am 99.9 1.2E-20 2.6E-25 191.3 30.7 216 132-382 58-312 (425)
238 PRK05967 cystathionine beta-ly 99.9 1.6E-20 3.5E-25 187.3 30.6 223 126-381 56-283 (395)
239 PRK08117 4-aminobutyrate amino 99.9 2.9E-20 6.2E-25 190.2 32.8 352 92-466 40-431 (433)
240 COG4992 ArgD Ornithine/acetylo 99.9 1.6E-20 3.5E-25 181.3 28.9 342 92-468 39-402 (404)
241 PRK06702 O-acetylhomoserine am 99.9 2.3E-20 4.9E-25 188.2 30.7 217 133-383 62-315 (432)
242 PRK07671 cystathionine beta-ly 99.9 2.3E-20 5E-25 187.0 30.3 216 131-382 49-270 (377)
243 TIGR02407 ectoine_ectB diamino 99.9 3.9E-20 8.5E-25 187.6 31.6 346 92-464 32-412 (412)
244 TIGR01814 kynureninase kynuren 99.9 4.9E-20 1.1E-24 187.4 31.4 325 95-462 26-405 (406)
245 PRK15407 lipopolysaccharide bi 99.9 4.7E-19 1E-23 180.5 37.9 322 97-463 25-435 (438)
246 KOG1359 Glycine C-acetyltransf 99.9 2.5E-20 5.5E-25 169.5 25.0 333 94-466 66-414 (417)
247 PRK09264 diaminobutyrate--2-ox 99.9 1.2E-19 2.6E-24 184.9 31.6 349 92-466 36-418 (425)
248 TIGR02618 tyr_phenol_ly tyrosi 99.9 3.2E-19 7E-24 177.1 33.5 353 85-464 19-426 (450)
249 PRK13034 serine hydroxymethylt 99.9 2.1E-19 4.6E-24 182.5 32.9 336 95-464 28-392 (416)
250 cd00615 Orn_deC_like Ornithine 99.9 5.5E-21 1.2E-25 185.7 20.2 225 130-375 57-292 (294)
251 PRK06176 cystathionine gamma-s 99.9 1.9E-19 4.1E-24 180.4 30.8 213 133-381 51-269 (380)
252 PRK05964 adenosylmethionine--8 99.9 3E-19 6.4E-24 182.2 32.3 346 93-465 40-423 (423)
253 COG0001 HemL Glutamate-1-semia 99.9 1.3E-19 2.9E-24 176.7 28.0 346 93-466 51-430 (432)
254 COG0399 WecE Predicted pyridox 99.9 6.4E-19 1.4E-23 172.1 32.0 308 111-464 15-373 (374)
255 KOG1360 5-aminolevulinate synt 99.9 1.5E-19 3.2E-24 170.7 26.3 369 62-466 127-526 (570)
256 PRK13580 serine hydroxymethylt 99.9 6.5E-19 1.4E-23 177.5 31.7 342 95-465 49-446 (493)
257 TIGR03531 selenium_SpcS O-phos 99.9 4.5E-19 9.7E-24 178.5 28.9 301 134-461 103-443 (444)
258 COG0075 Serine-pyruvate aminot 99.9 2.4E-18 5.2E-23 167.8 31.9 325 109-469 16-368 (383)
259 TIGR00709 dat 2,4-diaminobutyr 99.8 2.9E-18 6.3E-23 175.4 32.7 359 92-468 36-439 (442)
260 PRK13237 tyrosine phenol-lyase 99.8 8.7E-18 1.9E-22 167.4 33.6 355 85-464 26-433 (460)
261 PRK05994 O-acetylhomoserine am 99.8 2.6E-18 5.7E-23 174.7 30.5 214 134-382 65-316 (427)
262 PRK03715 argD acetylornithine 99.8 4.2E-18 9E-23 171.7 31.6 334 93-465 34-394 (395)
263 COG2008 GLY1 Threonine aldolas 99.8 1.4E-18 2.9E-23 164.8 26.1 312 108-462 11-341 (342)
264 PRK08593 4-aminobutyrate amino 99.8 7.7E-18 1.7E-22 172.2 33.7 356 92-466 39-431 (445)
265 PTZ00094 serine hydroxymethylt 99.8 4.7E-18 1E-22 174.7 32.2 337 95-464 34-408 (452)
266 PRK06541 hypothetical protein; 99.8 7.3E-18 1.6E-22 172.8 31.5 354 93-466 50-457 (460)
267 PRK08134 O-acetylhomoserine am 99.8 6.8E-18 1.5E-22 171.4 30.3 156 133-316 65-224 (433)
268 KOG1368 Threonine aldolase [Am 99.8 4.4E-18 9.6E-23 155.3 25.3 325 97-462 23-366 (384)
269 PRK07812 O-acetylhomoserine am 99.8 1.7E-17 3.7E-22 168.3 30.9 214 134-381 71-320 (436)
270 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 1.3E-17 2.8E-22 166.0 29.3 213 135-382 58-278 (386)
271 TIGR03372 putres_am_tran putre 99.8 2.1E-17 4.6E-22 167.9 31.4 338 93-462 73-442 (442)
272 TIGR01364 serC_1 phosphoserine 99.8 2.4E-17 5.3E-22 163.3 30.1 315 109-464 3-348 (349)
273 PRK11522 putrescine--2-oxoglut 99.8 3.5E-17 7.7E-22 167.4 31.6 342 93-466 80-453 (459)
274 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.3E-17 9.3E-22 163.1 31.3 305 111-459 5-363 (363)
275 PRK08114 cystathionine beta-ly 99.8 3.6E-17 7.9E-22 163.1 29.9 214 134-381 64-283 (395)
276 PRK07046 aminotransferase; Val 99.8 6.4E-17 1.4E-21 165.4 32.0 347 93-466 73-452 (453)
277 KOG1549 Cysteine desulfurase N 99.8 1.2E-17 2.6E-22 162.3 25.1 204 92-318 39-257 (428)
278 PF04864 Alliinase_C: Allinase 99.8 6.7E-19 1.5E-23 165.4 15.4 324 98-461 1-362 (363)
279 PLN02724 Molybdenum cofactor s 99.8 3E-17 6.4E-22 179.3 30.5 339 97-463 35-487 (805)
280 PLN02482 glutamate-1-semialdeh 99.8 4.1E-17 8.9E-22 167.1 29.6 346 93-464 97-473 (474)
281 PRK03080 phosphoserine aminotr 99.8 2.9E-17 6.2E-22 165.1 28.0 317 109-467 23-376 (378)
282 cd00611 PSAT_like Phosphoserin 99.8 3.6E-17 7.8E-22 163.1 28.4 314 108-461 9-353 (355)
283 TIGR01788 Glu-decarb-GAD gluta 99.8 1E-16 2.2E-21 162.2 31.0 334 110-465 54-430 (431)
284 COG0160 GabT 4-aminobutyrate a 99.8 1E-16 2.2E-21 159.6 29.8 350 93-465 54-446 (447)
285 PRK07678 aminotransferase; Val 99.8 1.9E-16 4.1E-21 162.3 31.6 357 93-466 45-451 (451)
286 PRK05769 4-aminobutyrate amino 99.8 3.6E-16 7.9E-21 159.7 33.7 347 92-465 51-440 (441)
287 PLN03226 serine hydroxymethylt 99.8 3E-16 6.5E-21 160.9 33.1 336 96-464 35-419 (475)
288 PLN02760 4-aminobutyrate:pyruv 99.8 2.2E-16 4.8E-21 163.1 32.3 351 93-465 87-492 (504)
289 PRK12389 glutamate-1-semialdeh 99.8 2.1E-16 4.6E-21 161.1 31.7 345 92-464 50-427 (428)
290 PRK04013 argD acetylornithine/ 99.8 6.2E-17 1.3E-21 160.7 26.8 324 93-466 22-362 (364)
291 PRK07482 hypothetical protein; 99.8 3.8E-16 8.2E-21 160.3 32.7 352 92-465 47-455 (461)
292 PRK05965 hypothetical protein; 99.8 2.7E-16 5.9E-21 161.3 31.6 358 92-470 43-453 (459)
293 PRK00615 glutamate-1-semialdeh 99.8 1.4E-16 2.9E-21 161.9 28.4 351 92-466 50-430 (433)
294 PRK02769 histidine decarboxyla 99.8 7.9E-16 1.7E-20 153.7 32.9 290 133-463 62-371 (380)
295 PRK05355 3-phosphoserine/phosp 99.8 2.4E-16 5.2E-21 157.0 28.1 317 108-464 13-358 (360)
296 PRK05613 O-acetylhomoserine am 99.8 4.8E-16 1E-20 157.8 30.7 214 134-381 71-325 (437)
297 PLN02414 glycine dehydrogenase 99.8 1.7E-16 3.6E-21 172.7 28.3 308 132-466 564-909 (993)
298 PRK06434 cystathionine gamma-l 99.8 4.7E-16 1E-20 155.3 29.3 211 133-381 65-281 (384)
299 PRK06917 hypothetical protein; 99.8 1.5E-15 3.2E-20 155.4 33.3 356 92-466 28-439 (447)
300 PRK13360 omega amino acid--pyr 99.8 1.1E-15 2.5E-20 156.0 31.8 345 93-465 44-441 (442)
301 cd01494 AAT_I Aspartate aminot 99.8 1.8E-17 3.9E-22 146.9 16.3 166 135-317 3-170 (170)
302 PRK06062 hypothetical protein; 99.8 1.5E-15 3.3E-20 155.5 32.6 356 92-466 50-447 (451)
303 PRK06943 adenosylmethionine--8 99.8 2E-15 4.4E-20 154.5 33.1 347 92-466 51-448 (453)
304 COG0626 MetC Cystathionine bet 99.8 1.4E-15 3.1E-20 149.6 30.5 216 131-382 62-286 (396)
305 PRK12403 putative aminotransfe 99.8 1.9E-15 4E-20 155.2 32.8 356 92-466 51-454 (460)
306 PRK07986 adenosylmethionine--8 99.8 1.2E-15 2.6E-20 154.9 30.9 340 92-464 40-423 (428)
307 PRK05639 4-aminobutyrate amino 99.8 2.3E-15 5E-20 154.1 33.1 349 92-465 50-444 (457)
308 PRK06105 aminotransferase; Pro 99.8 1.6E-15 3.4E-20 155.8 31.8 353 92-466 45-451 (460)
309 PRK07481 hypothetical protein; 99.8 2.9E-15 6.2E-20 153.5 33.1 352 93-466 40-447 (449)
310 KOG0053 Cystathionine beta-lya 99.8 8.9E-16 1.9E-20 149.1 27.4 214 134-382 79-298 (409)
311 PRK09221 beta alanine--pyruvat 99.8 3.2E-15 6.9E-20 152.9 33.1 346 92-465 46-444 (445)
312 PRK06173 adenosylmethionine--8 99.8 1.5E-15 3.3E-20 154.4 30.4 341 92-465 41-426 (429)
313 PRK04311 selenocysteine syntha 99.8 3.9E-15 8.5E-20 151.7 33.2 316 109-463 98-463 (464)
314 PRK06082 4-aminobutyrate amino 99.8 3E-15 6.4E-20 153.6 32.6 348 93-465 70-452 (459)
315 PLN02271 serine hydroxymethylt 99.8 2.9E-15 6.3E-20 151.8 31.7 338 95-463 148-539 (586)
316 PRK05630 adenosylmethionine--8 99.7 3E-15 6.5E-20 152.0 31.7 340 92-464 37-420 (422)
317 PRK07480 putative aminotransfe 99.7 3.9E-15 8.3E-20 152.6 31.8 354 92-466 47-450 (456)
318 PRK06938 diaminobutyrate--2-ox 99.7 5.3E-15 1.1E-19 151.8 32.3 357 92-466 60-462 (464)
319 PRK07036 hypothetical protein; 99.7 5E-15 1.1E-19 152.1 31.7 351 92-465 48-453 (466)
320 PRK07483 hypothetical protein; 99.7 5E-15 1.1E-19 151.3 31.0 362 92-468 27-441 (443)
321 PRK07030 adenosylmethionine--8 99.7 8.2E-15 1.8E-19 150.5 31.8 349 93-465 45-447 (466)
322 PRK06916 adenosylmethionine--8 99.7 9.5E-15 2.1E-19 150.0 32.0 351 92-465 53-456 (460)
323 TIGR00508 bioA adenosylmethion 99.7 6.4E-15 1.4E-19 150.1 30.4 337 93-464 43-426 (427)
324 PRK08742 adenosylmethionine--8 99.7 1.4E-14 3.1E-19 148.7 31.9 356 92-465 61-468 (472)
325 KOG2862 Alanine-glyoxylate ami 99.7 1.7E-14 3.7E-19 132.9 28.8 321 115-465 30-383 (385)
326 PLN03032 serine decarboxylase; 99.7 7.6E-15 1.6E-19 145.7 28.0 306 113-460 39-372 (374)
327 PLN02880 tyrosine decarboxylas 99.7 8.7E-15 1.9E-19 150.9 29.5 343 111-467 97-487 (490)
328 PRK06148 hypothetical protein; 99.7 1.7E-14 3.7E-19 160.7 32.9 350 93-465 622-1011(1013)
329 PRK06931 diaminobutyrate--2-ox 99.7 2E-14 4.3E-19 147.5 30.6 362 92-467 55-457 (459)
330 PRK06209 glutamate-1-semialdeh 99.7 3.4E-15 7.3E-20 152.4 24.2 333 92-465 45-406 (431)
331 TIGR01366 serC_3 phosphoserine 99.7 6.8E-15 1.5E-19 146.8 24.8 313 110-465 15-361 (361)
332 TIGR00474 selA seryl-tRNA(sec) 99.7 6.3E-14 1.4E-18 142.5 31.9 312 109-458 93-453 (454)
333 PRK08297 L-lysine aminotransfe 99.7 3.6E-14 7.9E-19 145.0 30.4 343 93-465 43-442 (443)
334 KOG1357 Serine palmitoyltransf 99.7 2.2E-15 4.9E-20 145.1 19.9 298 131-462 177-500 (519)
335 PLN02590 probable tyrosine dec 99.7 4.3E-14 9.4E-19 146.0 30.7 341 111-466 145-534 (539)
336 PRK06149 hypothetical protein; 99.7 6.4E-14 1.4E-18 156.0 33.9 349 93-464 583-970 (972)
337 COG0112 GlyA Glycine/serine hy 99.7 6.5E-14 1.4E-18 133.9 28.4 338 96-465 27-391 (413)
338 COG1103 Archaea-specific pyrid 99.7 2.4E-14 5.2E-19 129.4 23.3 299 134-465 63-381 (382)
339 PRK13578 ornithine decarboxyla 99.7 3.6E-14 7.8E-19 149.2 27.7 156 154-318 189-370 (720)
340 PF00464 SHMT: Serine hydroxym 99.7 3E-14 6.5E-19 140.9 25.3 330 96-456 21-397 (399)
341 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 4.8E-15 1E-19 147.1 16.9 234 135-386 69-328 (417)
342 PRK15029 arginine decarboxylas 99.6 2.7E-13 5.8E-18 144.1 30.7 154 154-316 220-399 (755)
343 PRK12566 glycine dehydrogenase 99.6 3.3E-13 7.2E-18 144.5 31.4 313 126-465 530-877 (954)
344 TIGR03251 LAT_fam L-lysine 6-t 99.6 2.1E-13 4.6E-18 139.2 28.9 339 93-460 36-430 (431)
345 PRK05367 glycine dehydrogenase 99.6 2.5E-13 5.4E-18 148.8 30.8 308 132-466 538-877 (954)
346 KOG1358 Serine palmitoyltransf 99.6 2E-14 4.3E-19 136.3 18.9 341 93-464 92-465 (467)
347 COG2873 MET17 O-acetylhomoseri 99.6 1.8E-13 3.9E-18 129.5 24.9 219 131-384 61-317 (426)
348 TIGR02617 tnaA_trp_ase tryptop 99.6 3.4E-13 7.3E-18 133.2 27.6 348 85-464 22-441 (467)
349 TIGR00699 GABAtrns_euk 4-amino 99.6 1.2E-13 2.6E-18 140.8 25.0 337 92-462 55-464 (464)
350 TIGR00461 gcvP glycine dehydro 99.6 1.3E-12 2.7E-17 141.0 33.3 314 125-466 516-869 (939)
351 PF01212 Beta_elim_lyase: Beta 99.6 7.5E-16 1.6E-20 147.8 6.7 249 109-380 7-272 (290)
352 KOG1401 Acetylornithine aminot 99.6 5.4E-13 1.2E-17 127.8 24.9 351 93-466 54-432 (433)
353 TIGR01365 serC_2 phosphoserine 99.6 8.8E-13 1.9E-17 131.0 25.8 313 113-463 19-372 (374)
354 PRK15400 lysine decarboxylase 99.6 1.1E-12 2.4E-17 138.0 26.7 149 154-312 210-375 (714)
355 TIGR03799 NOD_PanD_pyr putativ 99.6 5.7E-12 1.2E-16 130.5 31.4 328 117-457 110-518 (522)
356 COG0161 BioA Adenosylmethionin 99.6 4E-12 8.7E-17 126.2 28.8 354 93-466 42-445 (449)
357 COG0076 GadB Glutamate decarbo 99.6 1.4E-12 3E-17 132.6 26.0 277 109-398 74-381 (460)
358 PLN02263 serine decarboxylase 99.6 2.2E-11 4.8E-16 123.0 34.2 293 133-463 130-442 (470)
359 PLN02974 adenosylmethionine-8- 99.5 7.8E-12 1.7E-16 134.9 31.0 346 96-462 366-816 (817)
360 PLN02452 phosphoserine transam 99.5 6.6E-12 1.4E-16 124.7 28.2 323 97-464 8-363 (365)
361 PRK05367 glycine dehydrogenase 99.5 1E-11 2.2E-16 136.3 29.9 325 82-459 62-437 (954)
362 KOG1404 Alanine-glyoxylate ami 99.5 6.5E-12 1.4E-16 119.6 24.3 342 92-458 47-432 (442)
363 PRK15399 lysine decarboxylase 99.5 1.2E-11 2.6E-16 130.2 28.8 153 154-316 210-380 (713)
364 PLN02414 glycine dehydrogenase 99.5 1.8E-11 3.9E-16 133.8 29.5 330 82-460 89-465 (993)
365 KOG1402 Ornithine aminotransfe 99.5 1.1E-11 2.4E-16 115.3 22.7 333 93-463 57-426 (427)
366 COG1982 LdcC Arginine/lysine/o 99.5 6.5E-11 1.4E-15 120.0 27.7 236 135-387 73-321 (557)
367 PF00202 Aminotran_3: Aminotra 99.5 1E-12 2.2E-17 130.1 14.2 239 93-349 14-292 (339)
368 COG3844 Kynureninase [Amino ac 99.4 1.7E-10 3.6E-15 107.6 25.9 328 93-465 28-403 (407)
369 COG3033 TnaA Tryptophanase [Am 99.4 1.1E-10 2.4E-15 110.0 24.9 357 86-464 28-444 (471)
370 PRK12462 phosphoserine aminotr 99.4 1.5E-10 3.3E-15 113.9 27.1 323 97-464 5-362 (364)
371 PF06838 Met_gamma_lyase: Meth 99.4 8E-11 1.7E-15 112.1 21.8 183 126-326 47-247 (403)
372 PLN02994 1-aminocyclopropane-1 99.4 1.4E-12 3E-17 112.7 7.8 90 97-191 59-153 (153)
373 TIGR00461 gcvP glycine dehydro 99.3 2.5E-09 5.4E-14 115.9 30.3 326 82-459 50-426 (939)
374 PF00282 Pyridoxal_deC: Pyrido 99.3 4.2E-10 9E-15 112.5 21.6 272 111-395 54-371 (373)
375 COG1921 SelA Selenocysteine sy 99.2 4.7E-09 1E-13 102.2 24.9 230 98-349 30-268 (395)
376 KOG1383 Glutamate decarboxylas 99.1 4.1E-08 8.8E-13 96.2 24.4 346 93-468 77-450 (491)
377 PF02347 GDC-P: Glycine cleava 99.1 3.1E-08 6.7E-13 98.8 23.8 329 83-458 52-429 (429)
378 COG0403 GcvP Glycine cleavage 99.1 2.5E-07 5.3E-12 90.1 28.2 332 87-461 66-447 (450)
379 TIGR03811 tyr_de_CO2_Ent tyros 99.1 2.7E-07 5.8E-12 96.9 30.6 279 110-394 96-500 (608)
380 KOG2467 Glycine/serine hydroxy 99.1 1.7E-07 3.7E-12 88.9 25.8 348 80-463 28-425 (477)
381 COG1003 GcvP Glycine cleavage 99.1 7.1E-08 1.5E-12 93.7 23.3 306 131-467 104-450 (496)
382 COG4100 Cystathionine beta-lya 99.0 2.1E-08 4.5E-13 92.7 14.8 183 126-324 58-256 (416)
383 PF03841 SelA: L-seryl-tRNA se 98.9 3.8E-09 8.2E-14 102.0 7.0 215 154-378 61-296 (367)
384 KOG1403 Predicted alanine-glyo 98.8 4.5E-07 9.8E-12 83.9 19.0 346 94-463 46-436 (452)
385 PRK12566 glycine dehydrogenase 98.8 4.7E-06 1E-10 90.4 29.0 329 82-459 65-439 (954)
386 PF05889 SLA_LP_auto_ag: Solub 98.6 5E-06 1.1E-10 81.3 19.8 308 138-463 58-389 (389)
387 COG1932 SerC Phosphoserine ami 98.6 1.5E-05 3.3E-10 76.5 22.6 328 97-465 6-364 (365)
388 KOG0629 Glutamate decarboxylas 98.5 3.9E-05 8.5E-10 74.7 22.7 324 123-462 128-507 (510)
389 KOG1405 4-aminobutyrate aminot 98.4 1.8E-05 3.9E-10 75.2 17.4 215 217-464 254-483 (484)
390 KOG0628 Aromatic-L-amino-acid/ 98.4 0.00025 5.5E-09 69.9 25.6 315 130-466 107-473 (511)
391 KOG3846 L-kynurenine hydrolase 97.8 0.0078 1.7E-07 56.6 20.5 336 92-467 63-464 (465)
392 KOG2040 Glycine dehydrogenase 97.6 0.018 3.8E-07 59.5 21.4 300 132-462 578-916 (1001)
393 KOG3843 Predicted serine hydro 97.3 0.0016 3.6E-08 59.7 9.7 301 148-466 69-404 (432)
394 PLN02672 methionine S-methyltr 97.3 0.0066 1.4E-07 67.9 16.2 213 113-341 406-640 (1082)
395 KOG2040 Glycine dehydrogenase 96.9 0.12 2.5E-06 53.7 19.5 313 100-459 123-478 (1001)
396 KOG2790 Phosphoserine aminotra 96.5 0.31 6.8E-06 45.7 17.0 330 95-463 6-367 (370)
397 PLN02591 tryptophan synthase 88.8 21 0.00046 33.6 15.8 166 85-267 20-194 (250)
398 PF00290 Trp_syntA: Tryptophan 86.0 32 0.00068 32.6 14.7 166 85-267 28-203 (259)
399 COG2102 Predicted ATPases of P 85.2 7.8 0.00017 35.4 9.3 99 157-266 3-116 (223)
400 CHL00200 trpA tryptophan synth 83.5 41 0.0009 31.9 15.2 167 85-268 33-208 (263)
401 PRK13111 trpA tryptophan synth 75.2 76 0.0016 30.0 16.5 167 85-267 30-205 (258)
402 COG0031 CysK Cysteine synthase 74.5 32 0.0007 33.2 10.2 106 132-240 38-148 (300)
403 TIGR01019 sucCoAalpha succinyl 72.7 46 0.001 32.0 10.9 73 182-267 45-119 (286)
404 KOG1201 Hydroxysteroid 17-beta 71.2 29 0.00063 33.3 8.9 101 153-256 36-144 (300)
405 PF05368 NmrA: NmrA-like famil 69.5 24 0.00053 32.4 8.2 94 159-265 2-97 (233)
406 TIGR00290 MJ0570_dom MJ0570-re 66.8 64 0.0014 29.8 10.1 98 158-266 4-115 (223)
407 COG1105 FruK Fructose-1-phosph 66.7 55 0.0012 31.8 9.9 55 213-270 108-167 (310)
408 TIGR00262 trpA tryptophan synt 66.2 1.2E+02 0.0026 28.6 17.2 169 85-268 28-204 (256)
409 PRK05678 succinyl-CoA syntheta 65.2 21 0.00046 34.4 6.9 72 183-267 48-121 (291)
410 PRK08265 short chain dehydroge 64.6 73 0.0016 29.7 10.6 96 155-255 6-108 (261)
411 PF02662 FlpD: Methyl-viologen 62.6 25 0.00054 29.2 6.0 56 201-260 29-89 (124)
412 cd01563 Thr-synth_1 Threonine 62.5 1.1E+02 0.0024 29.8 11.7 73 132-208 50-124 (324)
413 cd00640 Trp-synth-beta_II Tryp 61.9 99 0.0022 28.6 10.8 104 133-243 28-135 (244)
414 cd01561 CBS_like CBS_like: Thi 61.8 1.1E+02 0.0023 29.5 11.2 77 133-209 30-108 (291)
415 PRK06352 threonine synthase; V 61.6 87 0.0019 31.1 10.8 105 97-208 21-130 (351)
416 PRK08197 threonine synthase; V 59.3 1.2E+02 0.0027 30.6 11.6 106 97-208 72-181 (394)
417 TIGR03573 WbuX N-acetyl sugar 58.6 1.4E+02 0.0031 29.5 11.6 108 155-277 60-175 (343)
418 PRK08329 threonine synthase; V 58.2 1.3E+02 0.0029 29.7 11.4 73 131-208 83-158 (347)
419 TIGR00289 conserved hypothetic 57.3 97 0.0021 28.6 9.5 98 158-266 4-115 (222)
420 TIGR01139 cysK cysteine syntha 56.5 1.8E+02 0.004 27.9 11.9 76 132-208 33-111 (298)
421 cd06568 GH20_SpHex_like A subg 56.0 25 0.00053 34.7 5.7 68 194-266 25-92 (329)
422 PRK05638 threonine synthase; V 55.7 1.8E+02 0.004 29.8 12.3 73 130-207 90-165 (442)
423 PF01902 ATP_bind_4: ATP-bindi 55.5 84 0.0018 28.9 8.7 98 158-266 4-115 (218)
424 TIGR01137 cysta_beta cystathio 55.2 1.8E+02 0.0039 29.9 12.3 76 132-208 38-116 (454)
425 PLN00011 cysteine synthase 54.2 1.6E+02 0.0034 28.8 11.1 75 132-208 44-123 (323)
426 PRK06721 threonine synthase; R 53.3 2.4E+02 0.0052 28.0 12.8 71 132-207 55-129 (352)
427 PRK08246 threonine dehydratase 52.8 1.7E+02 0.0038 28.4 11.1 73 131-207 48-121 (310)
428 TIGR01470 cysG_Nterm siroheme 52.8 1.5E+02 0.0032 27.0 9.9 96 153-270 7-103 (205)
429 cd02742 GH20_hexosaminidase Be 52.7 28 0.0006 33.8 5.5 67 194-266 23-89 (303)
430 COG0159 TrpA Tryptophan syntha 52.4 2.1E+02 0.0046 27.1 17.9 167 85-267 35-210 (265)
431 KOG1465 Translation initiation 52.3 1.4E+02 0.0029 28.9 9.5 108 153-271 160-273 (353)
432 cd06448 L-Ser-dehyd Serine deh 52.1 2.4E+02 0.0051 27.5 13.1 83 156-243 52-137 (316)
433 PRK06194 hypothetical protein; 51.3 1.6E+02 0.0036 27.7 10.7 66 156-226 7-75 (287)
434 PLN00125 Succinyl-CoA ligase [ 50.9 1.6E+02 0.0034 28.6 10.2 74 180-267 50-126 (300)
435 PLN02556 cysteine synthase/L-3 50.7 1.5E+02 0.0034 29.6 10.5 107 132-242 86-197 (368)
436 PF13460 NAD_binding_10: NADH( 48.6 74 0.0016 27.7 7.2 90 158-263 1-90 (183)
437 PLN03013 cysteine synthase 47.2 2.1E+02 0.0045 29.4 10.8 108 130-241 148-260 (429)
438 cd03313 enolase Enolase: Enola 47.0 74 0.0016 32.4 7.7 96 163-267 262-361 (408)
439 cd06570 GH20_chitobiase-like_1 46.6 39 0.00085 33.0 5.4 61 194-266 25-85 (311)
440 PLN02970 serine racemase 46.5 2.9E+02 0.0063 27.0 11.6 73 132-208 54-129 (328)
441 PLN02565 cysteine synthase 45.5 2.4E+02 0.0052 27.6 10.8 79 128-207 38-120 (322)
442 PRK13028 tryptophan synthase s 45.5 3.4E+02 0.0074 27.6 12.1 74 131-208 89-168 (402)
443 KOG1252 Cystathionine beta-syn 45.3 1.9E+02 0.0041 28.5 9.5 86 153-241 100-195 (362)
444 PRK06381 threonine synthase; V 45.3 3E+02 0.0065 26.7 12.4 72 132-208 43-117 (319)
445 PRK07476 eutB threonine dehydr 45.3 2.7E+02 0.0058 27.2 11.1 73 132-208 46-121 (322)
446 COG2240 PdxK Pyridoxal/pyridox 45.0 1.8E+02 0.0038 27.9 9.2 39 228-273 73-115 (281)
447 COG0373 HemA Glutamyl-tRNA red 44.8 1.8E+02 0.004 29.5 9.9 63 139-204 163-227 (414)
448 cd01562 Thr-dehyd Threonine de 44.7 1.4E+02 0.003 28.8 9.0 52 156-208 66-119 (304)
449 PRK12936 3-ketoacyl-(acyl-carr 44.7 2.2E+02 0.0048 25.8 10.2 77 156-237 7-89 (245)
450 COG1091 RfbD dTDP-4-dehydrorha 44.6 1.5E+02 0.0032 28.5 8.8 106 216-326 37-164 (281)
451 cd06562 GH20_HexA_HexB-like Be 44.3 36 0.00077 33.8 4.8 63 194-266 25-87 (348)
452 PRK07063 short chain dehydroge 44.1 2.3E+02 0.0049 26.2 10.2 67 154-225 6-77 (260)
453 PRK07231 fabG 3-ketoacyl-(acyl 43.5 2.3E+02 0.0049 25.8 10.1 80 154-238 4-91 (251)
454 TIGR02717 AcCoA-syn-alpha acet 43.4 1E+02 0.0023 31.7 8.2 81 187-275 53-134 (447)
455 PRK11761 cysM cysteine synthas 43.3 2.7E+02 0.0059 26.8 10.7 75 132-208 39-117 (296)
456 PRK08638 threonine dehydratase 42.7 1.1E+02 0.0024 30.1 8.0 72 131-207 53-128 (333)
457 cd04724 Tryptophan_synthase_al 42.3 2.9E+02 0.0063 25.7 18.4 166 83-268 16-193 (242)
458 COG0816 Predicted endonuclease 42.1 68 0.0015 27.3 5.4 57 216-272 40-99 (141)
459 PRK06450 threonine synthase; V 41.9 3.5E+02 0.0077 26.6 11.9 99 130-241 75-175 (338)
460 PF10087 DUF2325: Uncharacteri 41.6 1.7E+02 0.0036 22.8 8.2 71 187-267 10-80 (97)
461 PLN00191 enolase 41.2 92 0.002 32.2 7.3 98 163-268 296-394 (457)
462 COG0352 ThiE Thiamine monophos 41.2 75 0.0016 29.1 6.0 99 218-326 24-122 (211)
463 PRK05867 short chain dehydroge 40.7 2.9E+02 0.0063 25.4 10.3 67 154-225 8-77 (253)
464 PRK13125 trpA tryptophan synth 40.6 3.1E+02 0.0066 25.6 17.4 158 87-268 24-191 (244)
465 PRK06815 hypothetical protein; 40.5 3.1E+02 0.0068 26.6 10.8 52 157-208 70-122 (317)
466 COG0505 CarA Carbamoylphosphat 40.2 84 0.0018 31.0 6.4 71 177-259 177-249 (368)
467 PRK04296 thymidine kinase; Pro 38.7 1.1E+02 0.0023 27.3 6.7 90 165-268 17-112 (190)
468 TIGR03679 arCOG00187 arCOG0018 38.2 2.6E+02 0.0056 25.6 9.2 97 159-266 2-116 (218)
469 KOG2741 Dimeric dihydrodiol de 38.0 1.2E+02 0.0026 29.8 7.1 75 186-272 58-132 (351)
470 PRK08278 short chain dehydroge 37.9 3.4E+02 0.0075 25.4 10.7 76 156-236 7-98 (273)
471 PRK05876 short chain dehydroge 37.7 3E+02 0.0065 25.9 10.0 67 155-226 6-75 (275)
472 PRK08813 threonine dehydratase 37.6 2.4E+02 0.0051 28.1 9.4 75 131-207 59-134 (349)
473 smart00642 Aamy Alpha-amylase 37.6 1.1E+02 0.0023 26.8 6.3 28 246-274 68-95 (166)
474 PRK07424 bifunctional sterol d 37.6 2.9E+02 0.0063 28.1 10.2 96 154-256 177-272 (406)
475 PRK04147 N-acetylneuraminate l 36.8 3.9E+02 0.0084 25.6 14.6 87 158-270 76-167 (293)
476 PRK05872 short chain dehydroge 36.8 3E+02 0.0065 26.2 9.9 67 154-225 8-76 (296)
477 TIGR00649 MG423 conserved hypo 36.7 2.5E+02 0.0054 28.6 9.8 93 156-260 287-399 (422)
478 PRK06500 short chain dehydroge 36.5 3.3E+02 0.0072 24.7 10.2 55 156-210 7-61 (249)
479 PRK07067 sorbitol dehydrogenas 36.5 3.1E+02 0.0067 25.2 9.8 76 156-236 7-88 (257)
480 cd00950 DHDPS Dihydrodipicolin 36.4 3.8E+02 0.0083 25.4 10.9 36 230-270 128-163 (284)
481 PRK07409 threonine synthase; V 36.4 4.4E+02 0.0094 26.1 12.9 105 96-207 23-132 (353)
482 PRK06463 fabG 3-ketoacyl-(acyl 36.3 3.4E+02 0.0075 24.9 10.6 31 155-185 7-37 (255)
483 COG4221 Short-chain alcohol de 36.1 1.6E+02 0.0034 27.6 7.3 96 156-256 6-111 (246)
484 PRK06483 dihydromonapterin red 36.1 3.3E+02 0.0072 24.6 10.4 50 157-206 4-53 (236)
485 COG1088 RfbB dTDP-D-glucose 4, 36.0 4.2E+02 0.0091 25.8 10.7 115 157-277 2-136 (340)
486 PRK08339 short chain dehydroge 35.9 3.2E+02 0.0068 25.5 9.8 65 156-225 9-77 (263)
487 PRK07048 serine/threonine dehy 35.5 1.9E+02 0.004 28.3 8.3 53 156-208 73-126 (321)
488 PRK12481 2-deoxy-D-gluconate 3 35.5 2.9E+02 0.0063 25.4 9.4 67 155-226 8-75 (251)
489 PRK08862 short chain dehydroge 35.3 3.1E+02 0.0066 25.0 9.4 66 155-225 5-73 (227)
490 PF09885 DUF2112: Uncharacteri 35.0 93 0.002 26.0 4.9 26 440-465 118-143 (143)
491 PRK08277 D-mannonate oxidoredu 34.8 3.7E+02 0.008 25.1 10.2 67 154-225 9-78 (278)
492 PRK07478 short chain dehydroge 34.7 3.4E+02 0.0074 24.9 9.8 65 156-225 7-74 (254)
493 PRK06139 short chain dehydroge 34.7 2.9E+02 0.0064 27.0 9.6 66 155-225 7-75 (330)
494 PRK08589 short chain dehydroge 34.6 3.8E+02 0.0083 25.0 10.2 64 156-225 7-73 (272)
495 cd00408 DHDPS-like Dihydrodipi 33.9 4.1E+02 0.009 25.1 11.8 107 135-270 49-160 (281)
496 cd06569 GH20_Sm-chitobiase-lik 33.7 78 0.0017 32.6 5.5 73 193-266 28-114 (445)
497 COG0296 GlgB 1,4-alpha-glucan 33.2 56 0.0012 35.0 4.4 42 232-277 201-242 (628)
498 TIGR01138 cysM cysteine syntha 33.0 3.8E+02 0.0082 25.7 9.9 75 132-208 35-113 (290)
499 PRK05717 oxidoreductase; Valid 32.7 3.2E+02 0.0069 25.1 9.2 65 156-225 11-75 (255)
500 PTZ00187 succinyl-CoA syntheta 32.6 1.3E+02 0.0028 29.4 6.5 70 185-267 73-145 (317)
No 1
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-70 Score=544.06 Aligned_cols=358 Identities=43% Similarity=0.726 Sum_probs=333.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-EEEeCChHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ-ILVSNGAKQSILQAVL 173 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~it~G~~~al~~~~~ 173 (471)
.++|+|++|+|++++|+.+.+++.+++.++..+|++..|+++||++|++++++++|..+++++ |++|+|++++|..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 479999999999999999999999999876447889999999999999999999998888876 9999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++++|||+|++++|+|++|..+++.+|++++.++++.+ ++|.+|++.|++++++++|+|++|+||||||.+++++++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~ 187 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKA 187 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHH
Confidence 99999999999999999999999999999999998765 48999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhcc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF 331 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~ 331 (471)
|+++|++| +++||+||+|.++.|++..+.++.++....+++|+++||||.|+|+|||+||++++ +++++.+.+++...
T Consensus 188 i~~~a~~~-~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~ 266 (393)
T COG0436 188 IVELAREH-DIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL 266 (393)
T ss_pred HHHHHHHc-CeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence 99999999 99999999999999998666777777665689999999999999999999999999 89999999999999
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecCCccCCcccCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
.+|++.+.|.++.++|+.... ..+++.+++.|++||+.+.+.|.+++|+.+.. |+|+||+|++++..
T Consensus 267 ~~~~~~~~Q~aa~~aL~~~~~-~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~----------- 334 (393)
T COG0436 267 TSCAPTPAQYAAIAALNGPQS-DEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL----------- 334 (393)
T ss_pred ccCCCHHHHHHHHHHhcCccc-hHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-----------
Confidence 999999999999999997422 46888899999999999999999998899988 89999999999864
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
.++.+|+.+|++++||.++||+.||.+ ++||+|++.+.+++++++++|.++++.+
T Consensus 335 ~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 335 LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 289999999999999999999999975 7999999998899999999999998764
No 2
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-62 Score=466.00 Aligned_cols=384 Identities=38% Similarity=0.644 Sum_probs=336.9
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEE-cCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIR-LAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~-l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+.++...+++.+.++..++.+ .+ ..+ |+.|.|++++|+.+.+++.+++.+. .++|++..|.++|+++|++.++
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e---~~--~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~s 83 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAE---HK--VPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYS 83 (420)
T ss_pred cccccccCCcHHHHHHHHHHh---cC--CCCcccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHH
Confidence 344555556656565554433 22 233 9999999999999999999998874 7899999999999999999999
Q ss_pred HHhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC------CCCCCcCCHH
Q 012095 147 EENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR------ISENFLLDPK 219 (471)
Q Consensus 147 ~~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~------~~~~~~ld~e 219 (471)
..+|....+ ++|++|.|+.++|..++++++++||+|++.+|.|..|...++++|+++++|+.. ..++|.+|.+
T Consensus 84 e~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~ 163 (420)
T KOG0257|consen 84 EFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPE 163 (420)
T ss_pred HHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChH
Confidence 988877666 579999999999999999999999999999999999999999999999999998 5677999999
Q ss_pred HHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 220 ~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
+++.+++++||+|++|+||||||.++|+++|++|+++|++| |++||.||+|..+.|++..+..+..++++++++|.++|
T Consensus 164 ~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~-~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS 242 (420)
T KOG0257|consen 164 ELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH-GLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGS 242 (420)
T ss_pred HHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecc
Confidence 99999999999999999999999999999999999999999 99999999999999999889999999999999999999
Q ss_pred CCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCC-----hHHHHHHHHHHHHHHHHHHHH
Q 012095 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAG-----GEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 300 ~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~-----~~~~~~~~~~~~~~r~~l~~~ 374 (471)
|||+||++|||+||+++++.++..+..++....+..+++.|.|..+++..++.. ..++.++.+.|+++|+.|.+.
T Consensus 243 ~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~ 322 (420)
T KOG0257|consen 243 FGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKA 322 (420)
T ss_pred ccceeeeeeeeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988764310 155677999999999999999
Q ss_pred hcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-------CcEEEEeec
Q 012095 375 FGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD-------TCIRISYAA 446 (471)
Q Consensus 375 L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~-------~~iRis~~~ 446 (471)
|.++ |++++.|+|++|+|++++... .+..++.....++-.++.+|+++.||.+.|++.||.+ +++|++++.
T Consensus 323 L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k 401 (420)
T KOG0257|consen 323 LEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK 401 (420)
T ss_pred HHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHh
Confidence 9999 999999999999999998211 1112222223356788999999999999999999964 468888888
Q ss_pred CHHHHHHHHHHHH
Q 012095 447 SLTTLQAAVERIK 459 (471)
Q Consensus 447 ~~e~i~~~~~~l~ 459 (471)
+++.++.++++|+
T Consensus 402 ~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 402 ADETLRKAIERLK 414 (420)
T ss_pred hHHHHHHHHHHHh
Confidence 9899999999988
No 3
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.7e-60 Score=479.95 Aligned_cols=381 Identities=23% Similarity=0.387 Sum_probs=330.6
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++..++.+.+..+.......+..|+++|+|+.|+|++++|+.+.+++.+.+... ..+|++..|.++||+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 82 (388)
T PRK07366 3 FAQRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYE 82 (388)
T ss_pred hhhhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHH
Confidence 455666666666666666666666788899999999999999999999999877543 4679888999999999999999
Q ss_pred HHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|++++++ +|++|+|+++++..+++++++|||+|++++|+|+.|...++..|++++.+|++.+++|.+|++++++.+
T Consensus 83 ~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (388)
T PRK07366 83 QRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEV 162 (388)
T ss_pred HhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhh
Confidence 9999989998 799999999999999999999999999999999999999999999999999987777889999998888
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC-ccccccCCCCCCceEEEecCCccc
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
.+++|+|++|+||||||.++|.+++++|+++|++| +++||+||+|.++.|++.. .+++..++...+++|+++||||.|
T Consensus 163 ~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 241 (388)
T PRK07366 163 LAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQH-DLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSY 241 (388)
T ss_pred cccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 77899999999999999999999999999999999 9999999999999987643 445666654456799999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
|++|+|+||+++++++++.+.+.+..+..+.++..+.++.++|.. .++|++++++.|+++|+.+.+.|+++ |+.+.
T Consensus 242 g~~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~---~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~ 317 (388)
T PRK07366 242 NMGGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTG---PQATVQQTVQIFRQRRDAFINALHQI-GWPVP 317 (388)
T ss_pred CCcchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 999999999999999999999888777666655555566666654 37899999999999999999999988 88878
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.|++|+|+|+++++... .++.++++.|++++||.+.||+.|+. ++|+||+++.+.+++++++++|++++
T Consensus 318 ~p~~g~f~~~~~~~~~~---------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 318 LPEATMYVWAKLPEPWQ---------GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred CCCeeEEEEEECCcccC---------CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 89999999999985321 14678888888778999999999975 47999999999999999999998763
No 4
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.1e-59 Score=477.67 Aligned_cols=376 Identities=32% Similarity=0.602 Sum_probs=334.7
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
.+++++..+..+.+..+.+.+ .+.++|+|+.|+|++++|+.+.+++.+++.++..+|++..|.++||++++++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 31 QVAKRLEKFKTTIFTQMSSLA-----IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred chhHHhhcCCCCHHHHHHHHh-----hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 357778888888776655443 234799999999999999999999999887766889999999999999999999
Q ss_pred HHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|++++++ +|++|+|+++++..++.++++|||+|++++|+|..|...++..|++++.++++.++ |.+|++.|++++
T Consensus 106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l~~~~ 184 (413)
T PLN00175 106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDELKAAF 184 (413)
T ss_pred HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHHHHhc
Confidence 9999988887 79999999999999999999999999999999999999999999999999997544 889999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
.+++|+|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. +.++.++++..+++|+++||||.|+
T Consensus 185 ~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~ 262 (413)
T PLN00175 185 TSKTRAILINTPHNPTGKMFTREELELIASLCKEN-DVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFS 262 (413)
T ss_pred CcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhcc
Confidence 88999999999999999999999999999999999 999999999999998653 4456666655689999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|||+||+++++++++.+........++++.+.|.++..+|.. .+.|+++.++.|+++++++.+.|.+. |+.+..
T Consensus 263 ~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 338 (413)
T PLN00175 263 LTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRA---PESYYEELKRDYSAKKDILVEGLKEV-GFKVYP 338 (413)
T ss_pred CcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecC
Confidence 99999999999999999999888777888999999999999986 46789999999999999999999998 899999
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-----~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
|+||||+|++++.. + ..++.+|+++|++++||.+.||+.|+. +++|||+++.+++++++++++|.+
T Consensus 339 p~g~~f~~~~~~~~-~--------~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~ 409 (413)
T PLN00175 339 SSGTYFVMVDHTPF-G--------FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKT 409 (413)
T ss_pred CCeeEEEEEecccc-C--------CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHH
Confidence 99999999998531 0 115679999999888999999999852 369999999999999999999999
Q ss_pred HHH
Q 012095 461 GLL 463 (471)
Q Consensus 461 ~l~ 463 (471)
+++
T Consensus 410 ~~~ 412 (413)
T PLN00175 410 KLK 412 (413)
T ss_pred HHh
Confidence 876
No 5
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-59 Score=474.11 Aligned_cols=376 Identities=26% Similarity=0.478 Sum_probs=334.5
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++....++.+.++...+.+....++++|+|+.|+|++++++.+.+++.+.+.. ....|+ ..|..+||++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~ 83 (399)
T PRK07681 5 LATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYN 83 (399)
T ss_pred HhHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHH
Confidence 45667777777777777666666566788999999999998899999999887754 234563 5899999999999999
Q ss_pred HHhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|+++++ ++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.+|++++++|.+|++++++++
T Consensus 84 ~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~ 163 (399)
T PRK07681 84 NTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEI 163 (399)
T ss_pred HHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhc
Confidence 999999998 8999999999999999999999999999999999999999999999999999987778899999999988
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
.+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++.+++...+++|+++||||.||
T Consensus 164 ~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 242 (399)
T PRK07681 164 ADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKH-NIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYS 242 (399)
T ss_pred cccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccC
Confidence 88899999999999999999999999999999999 99999999999999876555566666554578999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+.........+++.+.|.++..+|.+ ...++++.++.++++++.+.+.|++. |+++..
T Consensus 243 ~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 318 (399)
T PRK07681 243 LAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRN---GAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDK 318 (399)
T ss_pred CccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 99999999999999999999887766778999999999999986 35789999999999999999999988 888878
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
|.+|+|+|++++... ++.++++.|++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 319 p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 319 PAGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred CCeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 999999999998532 6788999999877999999999875 479999999988999999999988
No 6
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.6e-59 Score=487.84 Aligned_cols=391 Identities=25% Similarity=0.412 Sum_probs=332.2
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHH
Q 012095 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSA 140 (471)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ 140 (471)
+++.+++++.++.++....+...+..++..|+++|+|+.|+| ++++|+.+.+++.+++.. ..+|++..|..+||++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lRea 193 (517)
T PRK13355 115 RTFKKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKA 193 (517)
T ss_pred cCCChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHH
Confidence 446688999999998888888888888888999999999998 577799999999888764 5679999999999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHH
Q 012095 141 ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 220 (471)
Q Consensus 141 ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~ 220 (471)
|+++++++++..+++++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++++++|.+|+++
T Consensus 194 ia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~ 273 (517)
T PRK13355 194 IMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDD 273 (517)
T ss_pred HHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHH
Confidence 99999887766689999999999999999999999999999999999999999999999999999999887789999999
Q ss_pred HHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecC
Q 012095 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (471)
Q Consensus 221 l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (471)
+++++++++|+|+++|||||||.+++.+++++|+++|++| +++||+||+|.++.|++..+.++..+.. ...+++++||
T Consensus 274 l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~-~~~ii~DE~Y~~~~~~~~~~~s~~~~~~-~~~vi~~~S~ 351 (517)
T PRK13355 274 IRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREH-QLIIFSDEIYDRLVMDGLEHTSIASLAP-DLFCVTFSGL 351 (517)
T ss_pred HHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEehhhhhhcCCCCCcccHHHhCC-CCeEEEEecc
Confidence 9999999999999999999999999999999999999999 9999999999999998755566655533 2457888999
Q ss_pred CcccCccchhheeeEc--CHHH----HHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 301 SKAFAMTGWRLGYIAG--PKHF----VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 301 SK~~g~~G~R~G~v~~--~~~~----i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
||.|+++|||+||+++ ++++ ++.+... .....+++.++|.++..+|.......+++...+. +.++|+++.+.
T Consensus 352 SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~-~~~~r~~l~~~ 429 (517)
T PRK13355 352 SKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGR-VYEQRELVYNA 429 (517)
T ss_pred hhhccCcccceEEEEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999994 4544 4444333 3344678999999999999642112456666544 44568999999
Q ss_pred hcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHH
Q 012095 375 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQ 452 (471)
Q Consensus 375 L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~~~e~i~ 452 (471)
|++++|+++.+|+|+||+|++++... ..+.++.+++..++++.||.++||+.|+ .++||||+|+.++++|+
T Consensus 430 L~~~~g~~~~~p~g~fy~~~~l~~~~-------~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~ 502 (517)
T PRK13355 430 LNAIPGISAVKPKAAFYIFPKIDVKK-------FNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLE 502 (517)
T ss_pred HhcCCCcccCCCCeeeEEEeecCccc-------CCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHH
Confidence 99998999999999999999987420 0012566788888888899999999997 36899999988999999
Q ss_pred HHHHHHHHHHHhhC
Q 012095 453 AAVERIKKGLLTLR 466 (471)
Q Consensus 453 ~~~~~l~~~l~~~~ 466 (471)
+++++|++++++.+
T Consensus 503 ~a~~rl~~~~~~~~ 516 (517)
T PRK13355 503 DAMDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999997653
No 7
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.5e-58 Score=467.24 Aligned_cols=378 Identities=28% Similarity=0.463 Sum_probs=331.6
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++....++.+..+...+......++++|+|+.|+|++++++.+.+++.+++... ..+|+|..|.++||+++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~ 84 (389)
T PRK08068 5 PSELLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYK 84 (389)
T ss_pred hhhHhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 556666677777777766666666677889999999999988888899988887653 4679889999999999999999
Q ss_pred HHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.+|++.+++|.+|++++++.+
T Consensus 85 ~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 164 (389)
T PRK08068 85 REYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEV 164 (389)
T ss_pred HHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhc
Confidence 8899888988 899999999999999999999999999999999999999999999999999987678899999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
.+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++.......+++++++||||.||
T Consensus 165 ~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~-~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g 243 (389)
T PRK08068 165 AEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKH-NIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFN 243 (389)
T ss_pred cccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccC
Confidence 88899999999999999999999999999999999 99999999999988865333344443334568999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+.+....+..+.+++.|.++..++.. ...+++++++.|+++++.+.+.|+++ |+.+.+
T Consensus 244 ~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~ 319 (389)
T PRK08068 244 MAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLS---DQSCVAELVARYESRRNAFISACREI-GWEVDA 319 (389)
T ss_pred CccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 99999999999999999999888777767777788888888865 46889999999999999999999988 888888
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
|+||||+|+++++.. ++.+++++|++++||.+.||..|+. ++++||+++.+++.+++++++|.++
T Consensus 320 ~~g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 320 PKGSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred CCeeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 999999999998532 6789999998777999999999985 4799999998888999999998763
No 8
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-58 Score=467.08 Aligned_cols=395 Identities=43% Similarity=0.706 Sum_probs=343.3
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..+.++.+..+.+.+++....|+++|+|+.|.|++++++.+.+++.+++.....+|++..|.++||+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 85 (402)
T PRK06107 6 PAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLER 85 (402)
T ss_pred hhHHhhhcCccHHHHHHHHHHHHHhccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 55667666666666666666666667888999999999999889999999998876667899999999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..|...+...|++++.++++.+++|.+|++.+++++++
T Consensus 86 ~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~ 165 (402)
T PRK06107 86 RNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP 165 (402)
T ss_pred hcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc
Confidence 89998899999999999999999999999999999999999999999999999999999987667788999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC-CCCCceEEEecCCcccCc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~ 306 (471)
+++++++++|+||||.+++.+++++|+++|++|++++||+||+|.++.|++...+++..+. +..+++++++||||.|++
T Consensus 166 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (402)
T PRK06107 166 RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAM 245 (402)
T ss_pred CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcC
Confidence 8999999999999999999999999999999964799999999999988765455555543 235789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+.........+++.+.|.++..+|.. .+.|+++.++.|+++++.+.+.|++++|+.+.+|
T Consensus 246 pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p 322 (402)
T PRK06107 246 TGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG---DQSFVTESVAVYKQRRDYALALLNAIPGLSCLVP 322 (402)
T ss_pred cccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCC
Confidence 9999999999999999999988877888999999999999975 3678999999999999999999998878998899
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+||||+|++++...+..........++.+++++|++++||.+.||+.|+.++|+|++++.++|++++++++|+++++++
T Consensus 323 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred CcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 9999999998532110000000112567889888888899999999999889999999999999999999999998765
No 9
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=4.1e-59 Score=482.50 Aligned_cols=398 Identities=22% Similarity=0.353 Sum_probs=328.7
Q ss_pred cccccccccCCChHHHHHHHHHHHHh---------cCCCeEEcCCCCCC----------------CCCh-----------
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQ---------AGVSVIRLAAGEPD----------------FDTP----------- 110 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~---------~g~~~i~l~~g~~~----------------~~~p----------- 110 (471)
.+++++.+++++...++..++.++++ +|.++|+|++|+|+ +.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 9 DINPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred ccCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 36888888888888888778877766 45799999999996 7664
Q ss_pred --HHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEE
Q 012095 111 --VLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVII 184 (471)
Q Consensus 111 --~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv 184 (471)
..+++++.+++.. ....|++..|.++||++|++++++.+|+++++++|++|+|+++++..++++++ +|||+|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 4777777766654 34679999999999999999999999999999999999999999999999998 79999999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 012095 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~ 258 (471)
++|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++|+|+++|||||||.++|.+++++|+++|+
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999998878899999999999864 7899999999999999999999999999999
Q ss_pred hCCCeEEEEccCCCccccCC-CCcccccc----CCCC---CCceEEEecCCcc-cCccchhheeeEc---CHHHHHHHHH
Q 012095 259 KHPRLLVLSDEIYEHIIYAP-ATHTSFAS----LPGM---WERTLTVNGFSKA-FAMTGWRLGYIAG---PKHFVAACNK 326 (471)
Q Consensus 259 ~~~~~~ii~De~y~~~~~~~-~~~~~~~~----~~~~---~~~~i~~~S~SK~-~g~~G~R~G~v~~---~~~~i~~l~~ 326 (471)
+| +++||+||+|.++.|++ ....++.. +... ..++|+++||||. ++|+|||+||+++ ++++++++.+
T Consensus 249 ~~-~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~ 327 (481)
T PTZ00377 249 EK-GIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYK 327 (481)
T ss_pred HC-CCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHH
Confidence 99 99999999999999853 23334332 2221 1379999999997 5999999999986 8999999988
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCC----ChHH---HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCc
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYA----GGEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 399 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~----~~~~---~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~ 399 (471)
... ...+++.++|.++..+|+.... .+.+ +.+++..|+++++.+.+.|++++|+.+..|+||||+|++++..
T Consensus 328 ~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~ 406 (481)
T PTZ00377 328 LAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELP 406 (481)
T ss_pred Hhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCc
Confidence 765 3457999999999999964211 1224 4444556899999999999999899999999999999876421
Q ss_pred cCC--cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 400 YGS--EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 400 ~~~--~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+. ...+. ...++..++..+++++||.++||+.|+. ++|||+|++.+++++++++++|+++++++..
T Consensus 407 ~~~~~~~~~~-~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 407 EKAIQEAKER-GLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred hhhHHHHHhc-CCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 000 00000 0123556777888888999999999984 3699999998888999999999999987653
No 10
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-58 Score=465.00 Aligned_cols=377 Identities=32% Similarity=0.566 Sum_probs=334.6
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++....++....+...+.++...|+++|+|+.|+|++++++.+.+++.+++.. ....|++..|.++||++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 83 (385)
T PRK09276 4 LADRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYK 83 (385)
T ss_pred hhhHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 45666677777676766667777778889999999999999899999999988764 34679888999999999999999
Q ss_pred HHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|.+++++ +|++|+|+++++..++..+++|||+|++++|+|+.|...++..|++++.++++.+++|.+|++++++.+
T Consensus 84 ~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~ 163 (385)
T PRK09276 84 RRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDV 163 (385)
T ss_pred HHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhc
Confidence 8889888887 599999999999999999999999999999999999999999999999999976667889999999988
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
.+++++|+++|||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..++...+++|+++||||.||
T Consensus 164 ~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 242 (385)
T PRK09276 164 AKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKY-DIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYN 242 (385)
T ss_pred cccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcC
Confidence 88899999999999999999999999999999999 99999999999998876555666666544578899999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+.+.......+++.+.|.++..+|.. .+.|++++++.++++++.+.+.|+++ |+.+..
T Consensus 243 ~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 318 (385)
T PRK09276 243 MTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNG---PQEVVEELRKIYQERRDILVEGLRKL-GLEVEP 318 (385)
T ss_pred CcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcC---cHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence 99999999999999999999887766777888899999999975 47889999999999999999999998 888888
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
|++|||+|+++++.. ++.+++++|++++||.+.||..|+. ++++||+++.+++++.+++++|.+
T Consensus 319 ~~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 319 PKATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred CCcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 999999999998542 6788999998777999999998875 479999999888999999999864
No 11
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=5.9e-58 Score=462.27 Aligned_cols=376 Identities=30% Similarity=0.528 Sum_probs=331.2
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
++++.....+.+..+.+.+.+.+..|+++++|+.|+|++++|+.+.+++.+++.. ...+|++..|.++||+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 82 (383)
T TIGR03540 3 ADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKR 82 (383)
T ss_pred chhhccCChhHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3444445555555566666666677889999999999999899999999987754 357898889999999999999998
Q ss_pred HhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|.+++++ +|++|+|+++++..++++++++||.|++++|+|+.|...++..|++++.+|++.++++.+|++++++.+.
T Consensus 83 ~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~ 162 (383)
T TIGR03540 83 RFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA 162 (383)
T ss_pred hhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc
Confidence 889887776 6999999999999999999999999999999999999999999999999999877788899999999988
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.||+
T Consensus 163 ~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~ 241 (383)
T TIGR03540 163 KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEY-NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNM 241 (383)
T ss_pred ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHc-CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCC
Confidence 8999999999999999999999999999999999 999999999999988765556666655445788999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++++.........+++.+.|.++..+|.+ ..+|++++++.++++++.+.+.|++. |+.+..|
T Consensus 242 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~ 317 (383)
T TIGR03540 242 TGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNG---PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKP 317 (383)
T ss_pred ccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCC
Confidence 9999999999999999998887766677888999999999986 47899999999999999999999998 8999899
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
++|||+|+++++.. ++.+++++|++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 318 ~~~~~~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 99999999998542 6789999988777999999999975 479999999888999999998864
No 12
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-58 Score=462.38 Aligned_cols=375 Identities=32% Similarity=0.578 Sum_probs=327.5
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++.......+..+.+.. +..+++|+|+.|+|++++++.+.+++.+.......+|++..|.++||+++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 81 (384)
T PRK06348 6 LAKKYQQMEVNIMAEIATLA----KKFPDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSK 81 (384)
T ss_pred HHHHHhcCCccHHHHHHHHH----HhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 45556555555554444332 22356899999999998888887777666655678899999999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.+++..+++|.+|++.+++.+++
T Consensus 82 ~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~ 161 (384)
T PRK06348 82 NYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS 161 (384)
T ss_pred HhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999986667789999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++ ...++..++...+++|+++||||.+|++
T Consensus 162 ~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~ 239 (384)
T PRK06348 162 KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEY-DLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMT 239 (384)
T ss_pred CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCc
Confidence 899999999999999999999999999999999 99999999999998865 2345555554457999999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+.........+++.+.|.++..+|.. .+.+++++++.|+++++++.+.|.+++|+++.+|+
T Consensus 240 GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~ 316 (384)
T PRK06348 240 GWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH---RDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPK 316 (384)
T ss_pred cccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCC
Confidence 999999999999999999888777778999999999999975 47889999999999999999999988788888999
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
||||+|++++... .++.++++.|++++||.+.||+.|+. ++++|++++.+++++++++++|++.
T Consensus 317 gg~~~~~~~~~~~----------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 317 GSIYAFINIKKTG----------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred eeEEEEEecccCC----------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 9999999997420 16789999998878999999999985 4799999988889999999999764
No 13
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.4e-58 Score=462.43 Aligned_cols=379 Identities=27% Similarity=0.499 Sum_probs=330.8
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
.+++++..+.++....+.+.+...+..|+++|+|+.|+|++++|+.+.+++.+.+... ...|++..|.++||+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 86 (394)
T PRK05942 7 TPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWY 86 (394)
T ss_pred chhhhhccCCCcHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHH
Confidence 4556666666665555555566666678899999999999877777888777766543 478998999999999999999
Q ss_pred HHHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 146 KEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 146 ~~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++.+|++++++ +|++|+|+++++..++.++++|||+|++++|+|+.+...+...|++++.++++.+++|.+|++++++.
T Consensus 87 ~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 166 (394)
T PRK05942 87 HRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEE 166 (394)
T ss_pred HHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHh
Confidence 99889888888 58999999999999999999999999999999999999999999999999998777889999999999
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
+++++|+|+++|||||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..++...+++|+++||||.|
T Consensus 167 ~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~ 245 (394)
T PRK05942 167 VAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKY-EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTY 245 (394)
T ss_pred ccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhcc
Confidence 988999999999999999999999999999999999 9999999999999887654455555554346789999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
|++|+|+||+++++++++.+.........++++++|.++..+|+. .+.++++.++.|+++++++.+.|++. |+.+.
T Consensus 246 ~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~ 321 (394)
T PRK05942 246 NMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQL---PDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP 321 (394)
T ss_pred CChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence 999999999999999999999887766777899999999999975 47889999999999999999999887 88888
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.|++|||+|++++... ++.+++.++++++||.+.||+.|+. ++|+|++++.+.+.+.+++++|.++
T Consensus 322 ~~~~~~f~~~~~~~~~-----------~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 322 PTKATMYLWVPCPVGM-----------GSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred CCCeeeEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 8999999999998542 5678888888778999999999964 5799999998888999999999775
No 14
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.9e-58 Score=465.31 Aligned_cols=373 Identities=25% Similarity=0.416 Sum_probs=325.2
Q ss_pred ccccccCCChHHHHHHHHHHH-HhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATAL-AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 148 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 148 (471)
+++..++++.+..+.+.+..+ ...|+++|+|+.|+|++++|+.+.+++.+.+. +..+|++..|.++||++|++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~ 81 (396)
T PRK09147 3 PRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERR 81 (396)
T ss_pred chhhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 455667777777777777665 34688999999999999999999999988765 4678998999999999999999999
Q ss_pred hCCC-CCCC-cEEEeCChHHHHHHHHHHhcCC---CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHh
Q 012095 149 NGLS-YTPD-QILVSNGAKQSILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (471)
Q Consensus 149 ~g~~-~~~~-~i~it~G~~~al~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~ 223 (471)
+|++ ++++ +|++|+|+++++..+++++++| ||.|++++|+|+.|...++..|++++.+|++.+++|.+|++.+++
T Consensus 82 ~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~ 161 (396)
T PRK09147 82 YGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPA 161 (396)
T ss_pred hCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHH
Confidence 9988 8885 9999999999999999999999 899999999999999999999999999999877789999999998
Q ss_pred hhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-Ccccccc----CC-CCCCceEEE
Q 012095 224 KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFAS----LP-GMWERTLTV 297 (471)
Q Consensus 224 ~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~----~~-~~~~~~i~~ 297 (471)
.+.+++|++++||||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ...+... +. ...+++|++
T Consensus 162 ~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 240 (396)
T PRK09147 162 EVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRY-GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVF 240 (396)
T ss_pred HHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEE
Confidence 8877899999999999999999999999999999999 999999999999988653 1112111 11 124799999
Q ss_pred ecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
+||||.++++|+|+||+++++++++.+.+.......+++.+.|.++.+++.. .+++.+.++.|+++++.+.+.|.+
T Consensus 241 ~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 241 HSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWND----EAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred eccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998877666667899999998888853 678999999999999999999987
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEEEEeecCHH
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIRISYAASLT 449 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--------~~~iRis~~~~~e 449 (471)
. +.+..|++|+|+|++++ . ++.++++.|++++||.+.||..|+. .+++||+++.+++
T Consensus 317 ~--~~~~~p~~g~f~~~~~~-~------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~ 381 (396)
T PRK09147 317 V--LDVQLPDAGFYLWAKVP-G------------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLA 381 (396)
T ss_pred h--cCCCCCCeeEEEEEECC-C------------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHH
Confidence 4 56678999999999997 2 5678999988777999999998862 4699999999889
Q ss_pred HHHHHHHHHHHHHH
Q 012095 450 TLQAAVERIKKGLL 463 (471)
Q Consensus 450 ~i~~~~~~l~~~l~ 463 (471)
++++++++|.++++
T Consensus 382 ~l~~~l~rl~~~~~ 395 (396)
T PRK09147 382 ECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998874
No 15
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-58 Score=462.44 Aligned_cols=380 Identities=32% Similarity=0.547 Sum_probs=338.4
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
..++++++++.++.+.++...+.+....++++|+|+.|+|++++|+.+.+++.+.+..+..+|++..|.++||+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 82 (387)
T PRK08960 3 QGYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFY 82 (387)
T ss_pred cchhhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHH
Confidence 34567788888888888888877777788899999999999999999999999988766678999999999999999999
Q ss_pred HHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 146 ~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
++.+|+.+++++|++|+|++++|..++.++++|||+|++++|+|+.+...++..|++++.++++.+++|.+|++.+++.+
T Consensus 83 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~ 162 (387)
T PRK08960 83 AQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHW 162 (387)
T ss_pred HHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHh
Confidence 99999989999999999999999999999999999999999999999999999999999999987777899999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
+++++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ..++..+ .+++++++||||.||
T Consensus 163 ~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~Y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~g 237 (387)
T PRK08960 163 NADTVGALVASPANPTGTLLSRDELAALSQALRAR-GGHLVVDEIYHGLTYGVD-AASVLEV---DDDAFVLNSFSKYFG 237 (387)
T ss_pred CccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEeecccccC
Confidence 88899999999999999999999999999999999 999999999999888643 2333333 468999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-e
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S 384 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~ 384 (471)
++|+|+||+++++++++.+.+.......+++.+.|.++..+|... ...++.+.++.|+++++.+.+.|+++ |+.+ .
T Consensus 238 ~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 314 (387)
T PRK08960 238 MTGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPE--TLAILEARRAEFARRRDFLLPALREL-GFGIAV 314 (387)
T ss_pred CcccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcC--cHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCc
Confidence 999999999999999999998888778889999999999998742 36889999999999999999999987 7654 4
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.|+||+|+|+++++.. .++.++++.|++++||.+.||+.|+. ++|+|++++.+.+++++++++|.++
T Consensus 315 ~p~g~~f~~~~~~~~~----------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 384 (387)
T PRK08960 315 EPQGAFYLYADISAFG----------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARG 384 (387)
T ss_pred CCCeeEEEEEeccccC----------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 6899999999998521 16788999888878999999999975 3699999999889999999999987
Q ss_pred HH
Q 012095 462 LL 463 (471)
Q Consensus 462 l~ 463 (471)
++
T Consensus 385 ~~ 386 (387)
T PRK08960 385 LR 386 (387)
T ss_pred Hh
Confidence 64
No 16
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-58 Score=463.79 Aligned_cols=384 Identities=26% Similarity=0.450 Sum_probs=331.4
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEE 148 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~ 148 (471)
+++..+.++.+..+...+.+.++.+.++++|+.|+|+.++|+.+.+++.+.+.. ...+|++..|.++||+++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~ 87 (403)
T PRK08636 8 NKIKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRK 87 (403)
T ss_pred HHHHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 445566666677777777777777888999999999988787788887776654 3678999999999999999999999
Q ss_pred hCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHH----Hh
Q 012095 149 NGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL----ES 223 (471)
Q Consensus 149 ~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l----~~ 223 (471)
+|++++++ +|++|+|+++++..+++++++|||.|++++|+|+.|...++..|++++.++++.+++|++|++.+ ++
T Consensus 88 ~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 167 (403)
T PRK08636 88 YNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEK 167 (403)
T ss_pred hCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHH
Confidence 99988987 79999999999999999999999999999999999999999999999999987566788998754 55
Q ss_pred hhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecC
Q 012095 224 KLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (471)
Q Consensus 224 ~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (471)
+++ .+++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++..++...+++|+++||
T Consensus 168 ~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~ 246 (403)
T PRK08636 168 ALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE-RFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTL 246 (403)
T ss_pred HHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEec
Confidence 553 4688999999999999999999999999999999 999999999999998765556666665444678899999
Q ss_pred CcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 301 SKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 301 SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
||.||++|+|+||+++++++++.+.+.......+++++.|.++..++.. ...|++++++.|+++++.+.+.|++. |
T Consensus 247 SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~ 322 (403)
T PRK08636 247 SKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDG---DQSCVEEIRETYRKRRDVLIESFANA-G 322 (403)
T ss_pred ccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHC-C
Confidence 9999999999999999999999998887665667888899988887764 36889999999999999999999987 7
Q ss_pred CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l 458 (471)
+.+..|++|+|+|+++++... ..++.++++.+++++||.+.||..|+. ++|+||+++.+++++++++++|
T Consensus 323 ~~~~~p~~g~~~~~~l~~~~~--------~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl 394 (403)
T PRK08636 323 WELQKPRASMFVWAKIPEPAR--------HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNI 394 (403)
T ss_pred CcccCCCcceEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHH
Confidence 888889999999999985321 014678998888778999999999975 4799999998889999999999
Q ss_pred HHHHHhhC
Q 012095 459 KKGLLTLR 466 (471)
Q Consensus 459 ~~~l~~~~ 466 (471)
+++++.++
T Consensus 395 ~~~l~~~~ 402 (403)
T PRK08636 395 KKFLKELE 402 (403)
T ss_pred HHHHHhhc
Confidence 99998754
No 17
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-57 Score=464.17 Aligned_cols=364 Identities=23% Similarity=0.418 Sum_probs=317.2
Q ss_pred CCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 94 GVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 94 g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
|+++|+|+.|+|+ +++|+.+.+++.+++..+ ...|++..|.++||+++++++++.+|.++++++|++|+|++++|
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 7899999999985 777899999999988764 45798889999999999999999899889999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHH
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
.++++++++|||+|++++|+|+.|...+...|++++.+++.++++|.+|++.+++.+++++++++++|||||||.+++.+
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~ 210 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYE 210 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999987777899999999999998999999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc--CHHHHH----
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFVA---- 322 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~--~~~~i~---- 322 (471)
++++|+++|+++ +++||+||+|.++.|++....++..+.. .+++|+++||||.|++||||+||+++ ++.+++
T Consensus 211 ~l~~i~~~a~~~-~i~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~ 288 (430)
T PLN00145 211 HLAKIAETARKL-GILVIADEVYDHLTFGSKPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKV 288 (430)
T ss_pred HHHHHHHHHHHc-CCEEEEeccchhhccCCCCccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHH
Confidence 999999999999 9999999999999987654455555543 57899999999999999999999997 444443
Q ss_pred --HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCCCcceEEeEecCCc
Q 012095 323 --ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTY 399 (471)
Q Consensus 323 --~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~~g~~~~~~~~~~ 399 (471)
.+.... ....+++++.|.++..+|... .++++++.++.++++++.+.+.|++++|+.+ ..|+|+||+|++++..
T Consensus 289 ~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~ 365 (430)
T PLN00145 289 VDSIRNYL-NISTDPATFVQGAIPQIIANT--KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLS 365 (430)
T ss_pred HHHHHHHh-cccCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChh
Confidence 333333 334467899999999999852 2688999999999999999999999888876 4799999999998732
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCC
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
.. ....++.+++.+|++++||.+.||..|+.++|+||+|+.+++++++++++|.+++.+.+..
T Consensus 366 ~~------~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 366 CL------SGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLERLKSFCLRHAKL 428 (430)
T ss_pred hc------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 00 0012567899889988899999999999899999999999899999999999999887644
No 18
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-57 Score=462.15 Aligned_cols=358 Identities=23% Similarity=0.351 Sum_probs=318.3
Q ss_pred CCeEEcCCCCCC-CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHHHHH
Q 012095 95 VSVIRLAAGEPD-FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 171 (471)
Q Consensus 95 ~~~i~l~~g~~~-~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~ 171 (471)
++.|+|+.|+|+ +++|+.+.+++.+++... ..+|++..|.++||++|++++++.+|.++++ ++|++|+|+++++..+
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~ 118 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLA 118 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence 468999999987 456778888888877653 4679889999999999999999999988888 8999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC---CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR---ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~---~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
+.+++++||+|++++|+|+.|...++..|++++.++++ .+++|++|+++|++++++++++|++++||||||.+++.+
T Consensus 119 ~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e 198 (405)
T PRK06207 119 VAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAE 198 (405)
T ss_pred HHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHH
Confidence 99999999999999999999999999999999999986 234688999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
++++|+++|++| +++||+||+|.++.|++....++..+....+++|+++||||.|+++|+|+||+++++++++.+.+..
T Consensus 199 ~l~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~ 277 (405)
T PRK06207 199 EIAQIAALARRY-GATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQ 277 (405)
T ss_pred HHHHHHHHHHHc-CCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHH
Confidence 999999999999 9999999999999987654445554444468999999999999999999999999999999999988
Q ss_pred hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 329 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
..+..+.+.+.|.++..+|++ ...|+++.++.++++|+.+.+.|++++|+.+..|++|+|+|++++...
T Consensus 278 ~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~-------- 346 (405)
T PRK06207 278 AIVSLRAAGYSQAVLRTWFSE---PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLA-------- 346 (405)
T ss_pred hHhccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccC--------
Confidence 877778889999999999975 356788888889999999999998887899888999999999997520
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+..++++.|++++||.+.||..|+. ++++||+++.+.+++++++++|++++++++
T Consensus 347 --~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 347 --VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred --CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 15788999988777999999999974 579999999988999999999999998764
No 19
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=8.7e-58 Score=466.52 Aligned_cols=381 Identities=22% Similarity=0.350 Sum_probs=315.5
Q ss_pred HHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 80 TVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 80 ~~~~~~~~~~~~~~g~~~i~l~~g~~---~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
+..+...+.+++..|+++++|+.|+| ++++|+.+.+++.+++.+ ...+|++..|.++||+++++++++.+|+++++
T Consensus 17 ~~~~~~~~~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~ 96 (433)
T PRK06855 17 IRNIVAVAKKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP 96 (433)
T ss_pred HHHHHHHHHHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH
Confidence 34455555666667889999999999 678899999999887754 45689999999999999999999989999999
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH-HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEE
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLL 232 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i 232 (471)
++|++|+|++++|..++. +++|||.|++++|+|+.|... ....|++++.++++++++|.+|+++|+++++ ++++++
T Consensus 97 ~~I~it~G~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i 175 (433)
T PRK06855 97 DDIIFFNGLGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGI 175 (433)
T ss_pred hHEEEcCcHHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEE
Confidence 999999999999998875 789999999999999998755 3456999999999877789999999999986 467899
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhe
Q 012095 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 312 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G 312 (471)
++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++...+++.++.. ..++|+++||||.|++||||+|
T Consensus 176 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG 253 (433)
T PRK06855 176 LLINPDNPTGAVYPKEILREIVDIAREY-DLFIICDEIYNNIVYNGKKTVPLSEVIG-DVPGIALKGISKELPWPGSRCG 253 (433)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCCHHHHcC-cCCeEEEecCccccCCCcceEE
Confidence 9999999999999999999999999999 9999999999999987654556666543 2468999999999999999999
Q ss_pred eeEcC-----H---HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 313 YIAGP-----K---HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 313 ~v~~~-----~---~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
|++++ + ++++.+..... ...+++.+.|.++..+|.++.. ++|++++++.|+++++.+.+.|++++|+.+.
T Consensus 254 ~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~ 331 (433)
T PRK06855 254 WIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEY-KNYLKERNKRYEKRSNIAYEKLKDVPGLKVN 331 (433)
T ss_pred EEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeecc
Confidence 99973 2 23344433332 3456889999999999986432 6899999999999999999999988888889
Q ss_pred CCCcceEEeEecCCccCCcccCCC----------------CCCCHHHHHHHHHHcCCEEEECCCCCCCC-CcEEEEeec-
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFG----------------KIENSESLCRYLLDKAQVALVPGDAFGDD-TCIRISYAA- 446 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~----------------~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~-~~iRis~~~- 446 (471)
+|+||||+|+++|+.......+.. ...++.+++..|+++.||.+.||+.|+.. .++||+|+.
T Consensus 332 ~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~ 411 (433)
T PRK06855 332 RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLER 411 (433)
T ss_pred CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCC
Confidence 999999999999863210000000 00146788888888889999999999753 579999997
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 012095 447 SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~l~~~ 465 (471)
++++|++++++|+++++++
T Consensus 412 ~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 412 DEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999764
No 20
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=3.7e-57 Score=458.75 Aligned_cols=384 Identities=27% Similarity=0.439 Sum_probs=330.2
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
++++..+.++.+.++.+.+......|+++|+|+.|+|++++|+.+.+++.+.+.. ...+|++..|.++||+++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 83 (405)
T PRK09148 4 FHRIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYAR 83 (405)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHH
Confidence 3455666677677776666666667889999999999998888888888887653 347899889999999999999998
Q ss_pred HhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|++++++ +|++|+|++++|..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|..+++++.+...
T Consensus 84 ~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~ 163 (405)
T PRK09148 84 RFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI 163 (405)
T ss_pred HhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc
Confidence 889888887 8999999999999999999999999999999999999999999999999999766666555555554445
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
++++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.+|+
T Consensus 164 ~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~ 242 (405)
T PRK09148 164 PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKH-DIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSM 242 (405)
T ss_pred ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCC
Confidence 6889999999999999999999999999999999 999999999999988764444555555435678999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+.+.+.....+++.+.|.++..+|.. .+.+++++++.|+++++.+.+.|+++ |+.+..|
T Consensus 243 pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~---~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p 318 (405)
T PRK09148 243 AGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNG---PQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPP 318 (405)
T ss_pred cchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCC
Confidence 9999999999999999999988777778899999999999975 36889999999999999999999987 7887789
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
++|+|+|+++|.... ..++.++++.|+++.||.+.||..|+. ++|+||+++.+.+++.+++++|.+++.+
T Consensus 319 ~~g~f~~~~l~~~~~--------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~ 390 (405)
T PRK09148 319 AASMFAWAPIPEAFR--------HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSS 390 (405)
T ss_pred CeeEEEEEECCCccC--------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 999999999985421 014678999888777999999999975 4799999998889999999999999875
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
+
T Consensus 391 ~ 391 (405)
T PRK09148 391 A 391 (405)
T ss_pred H
Confidence 4
No 21
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.3e-57 Score=464.26 Aligned_cols=366 Identities=23% Similarity=0.406 Sum_probs=315.3
Q ss_pred cCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 93 AGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 93 ~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.++++|+|+.|+|+ +.+|+.+.+++.+++..+ ...|++..|.++||+++++++++.+|..+++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 46789999999988 556788999999888754 3679999999999999999999888988999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCH
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~ 247 (471)
|..++.++++|||+|++++|+|+.|...++..|++++.+++.++++|.+|++.+++++++++++++++|||||||.+++.
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~ 223 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSH 223 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCH
Confidence 99999999999999999999999999999999999999999766789999999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC--HH---HHH
Q 012095 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--KH---FVA 322 (471)
Q Consensus 248 ~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~--~~---~i~ 322 (471)
+++++|+++|++| +++||+||+|.++.|++....++..+.. ..++|+++||||.|+++|||+||++++ +. +++
T Consensus 224 e~l~~i~~~a~~~-~i~iI~DE~Y~~l~f~~~~~~s~~~~~~-~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~ 301 (462)
T PLN02187 224 DHLKKVAETARKL-GIMVISDEVYDRTIFGDNPFVSMGKFAS-IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTK 301 (462)
T ss_pred HHHHHHHHHHHHC-CCEEEEeccccccccCCCCceeHHHhcc-CCcEEEEecchhhcCCccceeEEEEecCchhHHHHHH
Confidence 9999999999999 9999999999999987654445555543 257999999999999999999999983 33 345
Q ss_pred HHHHHHhcccC--CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCc
Q 012095 323 ACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTY 399 (471)
Q Consensus 323 ~l~~~~~~~~~--~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~ 399 (471)
.+...+..+.. +++.+.|.++.++|... ..+|+++.++.++++++++.+.|+++++.. +..|+||+|+|++++..
T Consensus 302 ~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~--~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~ 379 (462)
T PLN02187 302 VLQSIKQNLDVTPDPATIIQAALPAILEKA--DKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELS 379 (462)
T ss_pred HHHHHHHhccccCCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChh
Confidence 66666665544 56899999999999742 368999999999999999999999985554 34789999999988631
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCC
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
.. ..+.++.+++.+++++.||.+.||..|+.++||||+++.+++++++++++|.+++++...+
T Consensus 380 ~~------~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 380 LM------DNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred hC------CCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 00 0012466888888778899999999999889999999999999999999999999876543
No 22
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=5.6e-57 Score=454.36 Aligned_cols=356 Identities=46% Similarity=0.736 Sum_probs=318.2
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVL 173 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~~ 173 (471)
+++|+|+.|+|++++++.+.+++.+++.....+|++..|.++||+++++++++.+|++++++ +|++|+|+++++..+++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46899999999998888888998888766667898899999999999999999999888886 89999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
++++|||+|++++|+|+.|...++..|++++.++++.+++|.+|++++++++.++++++++++||||||.+++.+++++|
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l 179 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEI 179 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHH
Confidence 99999999999999999999999999999999998766678899999999998899999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
+++|++| +++||+||+|.++.+++. ..++..+....+++++++||||.||++|+|+||+++++++++.+.+.......
T Consensus 180 ~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~ 257 (378)
T PRK07682 180 AVIVEKH-DLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMM 257 (378)
T ss_pred HHHHHHc-CcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhcc
Confidence 9999999 999999999999998753 33444454445789999999999999999999999999999999887766667
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+++.+.|.++..+|++ .+.+++++++.|+++++.+.+.|+++ |+.+..|+|+||+|++++.. + .++
T Consensus 258 ~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~g~~~~~~~~~~~-~---------~~~ 323 (378)
T PRK07682 258 CAPTMAQFAALEALRA---GNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCHVPGGAFYAFPSISST-G---------LSS 323 (378)
T ss_pred CCCHHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHC-CCccCCCCeeEEEEEeccCC-C---------CCH
Confidence 7899999999999986 35678999999999999999999998 88888999999999988532 0 267
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.++++.|++++||.+.||..|+. ++++|||++.+.+++++++++|++++++++
T Consensus 324 ~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~ 378 (378)
T PRK07682 324 EEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred HHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhcC
Confidence 88999988777999999999975 589999999988999999999999987653
No 23
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=7.4e-57 Score=456.89 Aligned_cols=366 Identities=22% Similarity=0.389 Sum_probs=313.2
Q ss_pred hcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 92 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
..++++|+|+.|+|+ +++|+.+.+++.+++... ..+|+|..|.++||+++++++.+.+|.++++++|++|+|+++
T Consensus 29 ~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~ 108 (409)
T PLN00143 29 DDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH 108 (409)
T ss_pred CCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH
Confidence 357899999999998 899999999999988764 467999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCC
Q 012095 167 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 167 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~ 246 (471)
++..+++++++|||.|++++|+|+.|...++..|++++.++++.+++|.+|+++|++++++++++++++|||||||.+++
T Consensus 109 al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 109 AAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999999999999999876678899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc--CHHHH---
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--PKHFV--- 321 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~--~~~~i--- 321 (471)
.+++++|+++|++| +++||+||+|.++.|++....++..+.. .+++|+++||||.|+++|+|+||+++ ++.++
T Consensus 189 ~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~ 266 (409)
T PLN00143 189 YEHLNKIAETARKL-GILVIADEVYGHIVFGSKPFVPMGLFAS-IVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQIC 266 (409)
T ss_pred HHHHHHHHHHHHHc-CCeEEEEccccccccCCCCCcchhhhcc-cCcEEEEccchhhcCCCccceEEEEeeCchhhhhhH
Confidence 99999999999999 9999999999999987643334434432 46899999999999999999999998 34443
Q ss_pred ---HHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecC
Q 012095 322 ---AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFS 397 (471)
Q Consensus 322 ---~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~ 397 (471)
+.+.+.... ...++.+.|.++.++|.+. ...++++.++.++++++.+.+.|.++++.. +..|+||||+|++++
T Consensus 267 ~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~ 343 (409)
T PLN00143 267 EIADSIKKALNP-APFPPTFIQAAIPEILEKT--TEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLN 343 (409)
T ss_pred HHHHHHHHHHhc-cCCCCchHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecc
Confidence 334443332 3345889999999999742 367899999999999999999999875544 347899999999997
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCC
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
.... ....++.+++.++++++||.+.||..|+.++|+||+++.++++++++++||++++++...+
T Consensus 344 ~~~~------~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 344 LLLL------EDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred hhhc------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 4200 0012567888888777899999999999889999999999999999999999999877655
No 24
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.2e-56 Score=453.44 Aligned_cols=381 Identities=35% Similarity=0.588 Sum_probs=331.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++....++.+..+...+.+++..++++++|+.|+|++++|+.+.+++.+.+......|++..|.++||+++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 82 (388)
T PRK07337 3 LAARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYAR 82 (388)
T ss_pred hhhHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56667777777777777777777777889999999999998888999999988876677898889999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++.+++|.+|++++++.+++
T Consensus 83 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (388)
T PRK07337 83 RFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE 162 (388)
T ss_pred HhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc
Confidence 89988899999999999999999999999999999999999999999999999999999998767789999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ..++..+ .+++++++||||.+|++
T Consensus 163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~-~~~~~~~---~~~vi~~~S~SK~~~~~ 237 (388)
T PRK07337 163 RTRGVLLASPSNPTGTSIAPDELRRIVEAVRAR-GGFTIVDEIYQGLSYDAA-PVSALSL---GDDVITINSFSKYFNMT 237 (388)
T ss_pred cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHC-CCEEEEeccccccccCCC-CcChhhc---cCCEEEEEechhhcCCc
Confidence 999999999999999999999999999999999 999999999999887653 2233332 46799999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEP 386 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p 386 (471)
|+|+||+++++++++.+.+....+..+.+.+.|.++..++..+. ..++.+.++.|+++|+++.+.|+++ |+.+ ..|
T Consensus 238 G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p 314 (388)
T PRK07337 238 GWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDT--LAIYERRRAEFKRRRDFIVPALESL-GFKVPVMP 314 (388)
T ss_pred hhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCc--hHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC
Confidence 99999999999999999988877777889999999999987532 3557888999999999999999987 7654 478
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
++|+|+|+++++...+ ...++.+++++|++++||.+.||+.|+. ++|+||+++.+++++++++++|.+++
T Consensus 315 ~~g~f~~~~~~~~~~~------~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 315 DGAFYVYADCRGVAHP------AAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CeeEEEEEecccccCC------CCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 9999999999752100 0126778998888888999999999975 47999999998899999999998865
No 25
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-56 Score=451.92 Aligned_cols=376 Identities=27% Similarity=0.430 Sum_probs=323.9
Q ss_pred CChHHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC-
Q 012095 77 PSKTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLS- 152 (471)
Q Consensus 77 ~~~~~~~~~~~~~~~~--~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~- 152 (471)
.+++..+....+.++. .|.++|+|+.|+|++.+++.+.+++.+.+... ...|+ ..|..+||+++++++++.+|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~ 102 (410)
T PRK06290 24 IYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKD 102 (410)
T ss_pred hhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCc
Confidence 3455555555555543 46689999999999999999999888776543 45685 5899999999999999989987
Q ss_pred CCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcE
Q 012095 153 YTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (471)
Q Consensus 153 ~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~ 231 (471)
++++ +|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.++++.+++|.+|++++++++.+++++
T Consensus 103 ~~~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~ 182 (410)
T PRK06290 103 IDPVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKL 182 (410)
T ss_pred CCCcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceE
Confidence 8886 899999999999999999999999999999999999999999999999999987778889999999998888999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
|++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ..++..+....+++|+++||||.+|++|+|+
T Consensus 183 i~l~nP~NPTG~v~s~e~l~~l~~la~~~-~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRi 260 (410)
T PRK06290 183 LYLNYPNNPTGAVATKEFYEEVVDFAKEN-NIIVVQDAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRL 260 (410)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhhe
Confidence 99999999999999999999999999999 999999999999988652 3455555444578899999999999999999
Q ss_pred eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE
Q 012095 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 391 (471)
Q Consensus 312 G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~ 391 (471)
||+++++++++.+.+....+..+++.++|.++..+|.+ ..|+++.++.|+++++.+.+.|+++ |+.+.+|+||||
T Consensus 261 G~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~ 335 (410)
T PRK06290 261 AFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDH----PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY 335 (410)
T ss_pred EeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhC----cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE
Confidence 99999999999999888877777888999999999985 4788999999999999999999998 899889999999
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhC
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l~~~~ 466 (471)
+|+++|+.... +.+ ..++.+++++|+++++|.++||+.|+ +|+||+++. ++++.+++++.|.+.|.++.
T Consensus 336 l~v~lp~~~~~---~~~-~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 336 LYVKAPKGTKS---GIK-FENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred EEEECCCcccc---CCC-CCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 99999853210 000 02678999999999889999998764 799999995 77889999999999887654
No 26
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.9e-56 Score=454.09 Aligned_cols=365 Identities=24% Similarity=0.425 Sum_probs=317.9
Q ss_pred hcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 92 QAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
..|+++|+|+.|+|+ +++|+.+.+++.+++... ..+|++..|.++||+++++++++.+|..+++++|++|+|+++
T Consensus 28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 468899999999998 788999999999988764 568999999999999999999998898899999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCC
Q 012095 167 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 167 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~ 246 (471)
++..++.+++++||+|++++|+|+.|...++..|++++.++++.+++|.+|++.++++++++++++++++||||||.+++
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999976677899999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC--------H
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP--------K 318 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~--------~ 318 (471)
.+++++|+++|++| +++||+||+|.++.|++....++..+.. .+++|+++||||.|+++|+|+||++++ +
T Consensus 188 ~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~ 265 (409)
T PLN02656 188 YQHLKKIAETAEKL-KILVIADEVYGHLAFGSNPFVPMGVFGS-IVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDP 265 (409)
T ss_pred HHHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCcccHHHhcc-cCcEEEEcccchhccCcceeEEEEEEeCcccccccH
Confidence 99999999999999 9999999999999987654444444433 468999999999999999999999984 5
Q ss_pred HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecC
Q 012095 319 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFS 397 (471)
Q Consensus 319 ~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~ 397 (471)
++++++.+.... ..+++.+.|.++..+|++. .+.++++.++.++++|+.+.+.|++++++. +..|+||||+|++++
T Consensus 266 ~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~ 342 (409)
T PLN02656 266 KIVERIKKYFDI-LGGPATFIQAAVPTILEQT--DESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLN 342 (409)
T ss_pred HHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecc
Confidence 788888876554 3468899999999999752 357899999999999999999999886554 357999999999986
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
...- ....++.+++..++++.||.+.||+.|+.++|+||+++.+++++++++++|++++.+.+.
T Consensus 343 ~~~~------~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~ 406 (409)
T PLN02656 343 LSLL------EDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSK 406 (409)
T ss_pred hhhc------CCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcc
Confidence 3200 000135567766777789999999999988999999999999999999999999886653
No 27
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.4e-57 Score=454.12 Aligned_cols=352 Identities=23% Similarity=0.314 Sum_probs=318.2
Q ss_pred HHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 90 LAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 90 ~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
+...+.++++|+.|+|++.+|+.+ +++.+++.+...+|++..|.++||++|++++. + +++++|++|+|+++++.
T Consensus 21 ~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~--~~~~~vi~t~G~~~al~ 94 (373)
T PRK07324 21 YDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---N--VKPENILQTNGATGANF 94 (373)
T ss_pred cccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---C--CChhhEEEcCChHHHHH
Confidence 334577899999999999988888 88888888777899999999999999999874 2 57899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHH
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
.++.+++++||+|+++.|+|..+...++..|++++.+|++.+++|.+|++++++.+++++|+|++++||||||.+++.++
T Consensus 95 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~ 174 (373)
T PRK07324 95 LVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAY 174 (373)
T ss_pred HHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999999987778899999999999889999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~ 329 (471)
+++|+++|++| +++||+||+|.++.+++. ..++... .+++|+++||||.+|++|||+||+++++++++.+.+.+.
T Consensus 175 l~~i~~~a~~~-~~~ii~De~y~~l~~~~~-~~s~~~~---~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~ 249 (373)
T PRK07324 175 LEEIVEIARSV-DAYVLSDEVYRPLDEDGS-TPSIADL---YEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRD 249 (373)
T ss_pred HHHHHHHHHHC-CCEEEEEccccccccCCC-CCChhhc---cCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhC
Confidence 99999999999 999999999999887643 3333332 468899999999999999999999999999999999988
Q ss_pred cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCC
Q 012095 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (471)
Q Consensus 330 ~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~ 409 (471)
..+.+++.++|.++..+|+. .+.++++.++.++++++.+.+.|.+.+++.+..|++|+|+|+.++..
T Consensus 250 ~~~~~~~~~~q~~a~~~l~~---~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~---------- 316 (373)
T PRK07324 250 YTMICAGVFDDMLASLALEH---RDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVD---------- 316 (373)
T ss_pred cEEecCChHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCC----------
Confidence 77788999999999999875 46789999999999999999999988788999999999999988743
Q ss_pred CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 410 IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 410 ~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.++.+|+++|++++||.+.||+.|+.++++||+++.+++.+++++++|+++++++.
T Consensus 317 -~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~~ 372 (373)
T PRK07324 317 -MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREFD 372 (373)
T ss_pred -CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 26789999998888999999999998899999999999999999999999998754
No 28
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.8e-56 Score=452.64 Aligned_cols=370 Identities=25% Similarity=0.452 Sum_probs=319.8
Q ss_pred cccccCCChHHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 012095 71 RVNAVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEEN 149 (471)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~ 149 (471)
++...+.+.+.++...+.++. ..|+++|+|+.|+|++++|+.+.+++.+.+. ....|++..|.++||+++++++.+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~ 81 (393)
T TIGR03538 3 NLSRLQPYPFEKLAALLAGVTPPASKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRF 81 (393)
T ss_pred hhhhCCccHHHHHHHHHHhhhhhcCCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhh
Confidence 344555666667766666553 3678999999999999999999999998765 46789999999999999999999988
Q ss_pred CCC--CCCC-cEEEeCChHHHHHHHHHHhcCCCCe--EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 150 GLS--YTPD-QILVSNGAKQSILQAVLAVCSPGDE--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 150 g~~--~~~~-~i~it~G~~~al~~~~~~l~~~gd~--Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
|++ ++++ +|++|+|+++++..+++++++|||. |++++|+|+.|...++..|++++.++++++++|.+|+++++++
T Consensus 82 ~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 161 (393)
T TIGR03538 82 DLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPES 161 (393)
T ss_pred CCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHH
Confidence 876 6885 8999999999999999999999986 9999999999999999999999999998777899999999998
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-Cccccc-c---CC-CCCCceEEEe
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFA-S---LP-GMWERTLTVN 298 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~-~---~~-~~~~~~i~~~ 298 (471)
+.+++|+|+++|||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ...++. . .. ...+++|+++
T Consensus 162 ~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~ 240 (393)
T TIGR03538 162 VWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQY-GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFH 240 (393)
T ss_pred HhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEe
Confidence 878899999999999999999999999999999999 999999999999887642 222221 1 11 1357899999
Q ss_pred cCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
||||.++++|+|+||+++++++++.+.+.......+++.+.|.++.+.+.. ++++++.++.|+++++.+.+.|++.
T Consensus 241 S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~ 316 (393)
T TIGR03538 241 SLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWND----EQHVRENRALYREKFAAVLEILGQV 316 (393)
T ss_pred cchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC----hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999998887766667899999998888863 6789999999999999999999875
Q ss_pred CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEEEEeecCHHH
Q 012095 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIRISYAASLTT 450 (471)
Q Consensus 379 ~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--------~~~iRis~~~~~e~ 450 (471)
+.+..|++|+|+|++++ . ++.++++.|++++||.+.||+.|+. .+++||+++.++++
T Consensus 317 --~~~~~p~gg~f~~~~~~-~------------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~ 381 (393)
T TIGR03538 317 --LDLELPDAGFYLWPKVP-G------------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEE 381 (393)
T ss_pred --CcccCCCeeEEEEEECC-C------------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHH
Confidence 45667999999999997 2 5678999988878999999998852 36999999998999
Q ss_pred HHHHHHHHHHH
Q 012095 451 LQAAVERIKKG 461 (471)
Q Consensus 451 i~~~~~~l~~~ 461 (471)
+++++++|+++
T Consensus 382 l~~~l~~l~~~ 392 (393)
T TIGR03538 382 CVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 29
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-56 Score=449.85 Aligned_cols=390 Identities=51% Similarity=0.811 Sum_probs=346.6
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
+++|+++..+.++.+.++...+..+...+.++++|+.|+|++++++.+.+++.+.+.+...+|++..|..+||+++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 81 (393)
T PRK05764 2 MKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKL 81 (393)
T ss_pred cchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHH
Confidence 34788999999998888888877777778899999999999998899999999888766678999999999999999999
Q ss_pred HHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 146 ~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
.+.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..|..+++.+|++++.++++.+++|.+|++.+++++
T Consensus 82 ~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l 161 (393)
T PRK05764 82 KRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAI 161 (393)
T ss_pred HHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhh
Confidence 99988888899999999999999999999999999999999999999999999999999999987677899999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-CCCCCceEEEecCCccc
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAF 304 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~ 304 (471)
+++++++++++|+||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..+ ....+++++++||||.+
T Consensus 162 ~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~ 240 (393)
T PRK05764 162 TPKTKALILNSPSNPTGAVYSPEELEAIADVAVEH-DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAY 240 (393)
T ss_pred CccceEEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccc
Confidence 88899999999999999999999999999999999 99999999999998865433444444 23357899999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
|++|+|+||+++++++++.+.........+++.+.|.++..+|.. ..++++++++.++++++.+.+.|++++|+.+.
T Consensus 241 ~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 317 (393)
T PRK05764 241 AMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNG---PQDEVEEMRQAFEERRDLMVDGLNEIPGLECP 317 (393)
T ss_pred cCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcC---ChHHHHHHHHHHHHHHHHHHHHHhhCCCCccc
Confidence 999999999999999999999888777778999999999999974 36889999999999999999999998899988
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.|+|++|+|++++..... .+ .++.++.+.|++++||.+.||..|+.++++|++++.+++++++++++|.+++++
T Consensus 318 ~~~g~~~~~~~~~~~~~~--~~----~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 318 KPEGAFYVFPNVSKLLGK--SI----TDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred CCCcceEEEEeccccccc--cc----CCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 999999999999753210 00 135789999888789999999999888999999999999999999999999876
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
.
T Consensus 392 ~ 392 (393)
T PRK05764 392 L 392 (393)
T ss_pred h
Confidence 4
No 30
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-56 Score=449.47 Aligned_cols=379 Identities=39% Similarity=0.634 Sum_probs=330.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
++.++.......+..+.+.. +...++|+|+.|+|++++++.+.+++.+++......|++..|.++||+++++++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 85 (391)
T PRK08361 10 IAGRINLIQRSKIRELFERA----SKMENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKK 85 (391)
T ss_pred hhHHHHhCCccHHHHHHHHH----HhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 46666666655555544332 22346899999999998889999999988877677899999999999999999998
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|..+++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|++++.++++.+++|.+|++.+++.+++
T Consensus 86 ~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 165 (391)
T PRK08361 86 FYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK 165 (391)
T ss_pred HhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc
Confidence 88988899999999999999999999999999999999999999999999999999999998777789999999999998
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
+++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.+++....++..+. .+++++++||||.||++
T Consensus 166 ~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~i~~~s~SK~~~~~ 242 (391)
T PRK08361 166 RTRMIVINYPNNPTGATLDKEVAKAIADIAEDY-NIYILSDEPYEHFLYEGAKHYPMIKYA--PDNTILANSFSKTFAMT 242 (391)
T ss_pred ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEEcccccceeCCCCCCCHhhcC--CCCEEEEecCchhcCCc
Confidence 999999999999999999999999999999999 999999999999988654444444432 36899999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+.+.......+++.+.|.++..+|.++.. .+++++.++.++++++.+.+.|++++|+.+..|+
T Consensus 243 GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~ 321 (391)
T PRK08361 243 GWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKES-WKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPK 321 (391)
T ss_pred HhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcc-cHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC
Confidence 999999999999999988877666677899999999999986432 3678999999999999999999998889999999
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
||||+|+++++.. .++.++++.|++++||.+.||..|+. +++|||+++.+++++++++++|++++++
T Consensus 322 g~~~~~~~l~~~~----------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 322 GAFYVFANIDETG----------MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred EEEEEEEECCCCC----------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 9999999997420 26788999888778999999999975 4799999999888999999999998865
No 31
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-56 Score=448.41 Aligned_cols=373 Identities=33% Similarity=0.539 Sum_probs=326.0
Q ss_pred ccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 012095 72 VNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGL 151 (471)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 151 (471)
+....++.+.++...+. ..+++|+|+.|+|++++|+.+.+++.+.+.+....|++..|.++||+++++++++.+|.
T Consensus 5 ~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~ 80 (382)
T PRK06108 5 ARALPESGIREVANAGR----GREGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGV 80 (382)
T ss_pred hhhCCchHHHHHHHHHh----ccCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 33444444444433321 23468999999999999999999999988776677999999999999999999998898
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhhccCCc
Q 012095 152 SYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEKSR 230 (471)
Q Consensus 152 ~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~~~~~ 230 (471)
.+++++|++|+|+++++..++.+++++||.|++++|+|+.|...++..|++++.+|++.+ ++|.+|++++++.++++++
T Consensus 81 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~ 160 (382)
T PRK06108 81 ATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTR 160 (382)
T ss_pred CcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccce
Confidence 889999999999999999999999999999999999999999999999999999999753 4688999999999988899
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC-CCCccccccCCCCCCceEEEecCCcccCccch
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
+|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.++ +...+++..+....+++++++||||.||++|+
T Consensus 161 ~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 239 (382)
T PRK06108 161 ALFINSPNNPTGWTASRDDLRAILAHCRRH-GLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW 239 (382)
T ss_pred EEEEECCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc
Confidence 999999999999999999999999999999 9999999999999886 33334444544435789999999999999999
Q ss_pred hheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcc
Q 012095 310 RLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA 389 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g 389 (471)
|+||+++++++++.+.+.......+++.+.|.++..+|.. ..+++++++++++++++.+.+.|++++|+.+..|++|
T Consensus 240 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g 316 (382)
T PRK06108 240 RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDE---GEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGA 316 (382)
T ss_pred ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCee
Confidence 9999999999999998876655677899999999999986 3678899999999999999999998888999899999
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+|+|+++++. .+..+++++|++++||.+.||..|+. ++++|+|++.+++++++++++|+++++
T Consensus 317 ~~~~~~l~~~-----------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 317 MYAFFRIPGV-----------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEEeCCCC-----------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 9999999753 26778999998878999999998864 579999999998999999999999875
No 32
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=4.7e-56 Score=447.99 Aligned_cols=351 Identities=28% Similarity=0.505 Sum_probs=310.0
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAV 172 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~~ 172 (471)
++++|+|+.|+|++++++.+.+++.+++.....+|+|..|.++||+++++++++.+|.++++ ++|++|+|+++++..++
T Consensus 28 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 28 QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred hCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 35799999999999989999999998877666889999999999999999999999987766 68999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++++|||+|++++|+|..|...++.+|++++.++++. ++|.+|++.+++++++++++|++++||||||.+++.+++++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~ 186 (384)
T PRK12414 108 SALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLAR 186 (384)
T ss_pred HHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHH
Confidence 99999999999999999999999999999999999864 45789999999999888999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|+++|++| +++||+||+|.++.|++....++..++...+++|+++||||.||++|+|+||+++++++++.+.+......
T Consensus 187 i~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~ 265 (384)
T PRK12414 187 LAQLTRNT-DIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMV 265 (384)
T ss_pred HHHHHHHC-CeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhhee
Confidence 99999999 99999999999999876444455555444578999999999999999999999999999999999887777
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
.+++.+.|.++..+|.. ..+..+.++.|+++|+.+.+.|++. |+.+.+|.||||+|++++.... .+
T Consensus 266 ~~~s~~~q~a~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~~~~~---------~~ 331 (384)
T PRK12414 266 FSADTPMQHAFAEALAE----PASYLGLGAFYQRKRDLLARELAGS-RFELLPSEGSFFMLARFRHFSD---------ES 331 (384)
T ss_pred cCCCcHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCcceEEEEcccccCC---------CC
Confidence 78999999999999975 2334567889999999999999998 8888899999999999874210 14
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
+.+++..+++++||.+.||+.|+. ++++||+++.+++++++++++|.+
T Consensus 332 ~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 332 DSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 667887777778999999998863 479999999999999999999974
No 33
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=4.8e-56 Score=448.82 Aligned_cols=377 Identities=27% Similarity=0.490 Sum_probs=326.8
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 148 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 148 (471)
++++..+.++.+..+.+... ..++|+|+.|.|+.++|+.+.+++.+.+.++..+|++..|.++||+++++++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 79 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLAR-----EHGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARF 79 (387)
T ss_pred hHHHhhCCCCHHHHHHHHHh-----hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 45566666665555443332 2468999999999888888888888877666688999999999999999999988
Q ss_pred hCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 149 NGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 149 ~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+|++++++ +|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++. ++|.+|++.+++.+++
T Consensus 80 ~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~ 158 (387)
T PRK08912 80 QGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSP 158 (387)
T ss_pred hCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCc
Confidence 99888998 999999999999999999999999999999999999999999999999999864 4578999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
+++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++..+++..+++++++||||.||++
T Consensus 159 ~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 237 (387)
T PRK08912 159 RTKAVLLNNPLNPAGKVFPREELALLAEFCQRH-DAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLT 237 (387)
T ss_pred cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCc
Confidence 999999999999999999999999999999999 9999999999999887644455555544457899999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+........++.++..|.++..+|.. .++|++++++.++++++.+.+.|+++ |+.+.+|+
T Consensus 238 GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 313 (387)
T PRK08912 238 GWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK---PDDYFEGMRADLARSRDRLAAGLRRI-GFPVLPSQ 313 (387)
T ss_pred CceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC
Confidence 999999999999999998877766667788889888888864 47889999999999999999999998 88888899
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
|+||+|+++++... ..++.++++.|++++||.+.||..|+. .+|+||+++.+++++++++++|.++++
T Consensus 314 g~~~l~~~l~~~~~--------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 314 GTYFLTVDLAPLGL--------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARR 385 (387)
T ss_pred cceEEEecccccCC--------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 99999999975200 026788999988878999999999853 479999999988999999999999876
Q ss_pred h
Q 012095 464 T 464 (471)
Q Consensus 464 ~ 464 (471)
+
T Consensus 386 ~ 386 (387)
T PRK08912 386 R 386 (387)
T ss_pred c
Confidence 4
No 34
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=7.3e-56 Score=450.51 Aligned_cols=363 Identities=26% Similarity=0.455 Sum_probs=315.3
Q ss_pred cCCCeEEcCCCCCC----CCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHh------CCCCCCCcEEEe
Q 012095 93 AGVSVIRLAAGEPD----FDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN------GLSYTPDQILVS 161 (471)
Q Consensus 93 ~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~------g~~~~~~~i~it 161 (471)
.|+++|+|+.|+|+ +.+|+.+.+++.+.+.. ...+|++..|.++||+++++++++.+ |..+++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 67899999999987 45788999999887764 35789888899999999999998765 466889999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 162 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
+|+++++..++.+++++||+|++++|+|..|...++..|++++.++++.+++|++|++++++++++++++|+++||||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPt 190 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPC 190 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999999876778999999999998889999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc--C--
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG--P-- 317 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~--~-- 317 (471)
|.+++.+++++|+++|++| |++||+||+|.++.|++....++..++. ..++|+++||||.||++|+|+||+++ +
T Consensus 191 G~~~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~ 268 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEEL-RLPLISDEIYAGMVFNGATFTSVADFDT-TVPRVILGGTAKNLVVPGWRLGWLLLVDPHG 268 (412)
T ss_pred CcccCHHHHHHHHHHHHHc-CCeEEEeccccccccCCCCccchhhccC-CCceEEEccchhhcCCCCeeEEEEEEeCCcc
Confidence 9999999999999999999 9999999999999987644445555543 24689999999999999999999997 2
Q ss_pred --HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEe
Q 012095 318 --KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (471)
Q Consensus 318 --~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~ 395 (471)
+++++.+.+... ...+++++.|.++..+|.+. .+.|+++.++.++++++.+.+.|++..|+.+..|+||+|+|++
T Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~ 345 (412)
T PTZ00433 269 NGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNT--PQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSR 345 (412)
T ss_pred cHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEE
Confidence 467777777554 23578999999999999752 3688999999999999999999998768888899999999999
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
++... .....++.++++.|++++||.+.||+.|+.++|+||+++..++++++++++|.++++..+
T Consensus 346 l~~~~------~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 346 LDLEK------FRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHK 410 (412)
T ss_pred echhh------cCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 87410 000115678999998777999999999988899999999988999999999999998765
No 35
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=1.5e-55 Score=444.84 Aligned_cols=372 Identities=29% Similarity=0.490 Sum_probs=324.4
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE 148 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~ 148 (471)
.+++..+..+.+..+...+ ++.++|+|+.|.|++++++.+.+++.+.+..+..+|++..|.++||+++++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~ 83 (386)
T PRK09082 9 QSKLPNVGTTIFTVMSALA-----AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARL 83 (386)
T ss_pred hhHhhccCccHHHHHHHHH-----hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 3445555555443332222 23568999999999988889999999888766788999999999999999999998
Q ss_pred hCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 149 NGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 149 ~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++++. .+|.+|++++++.+++
T Consensus 84 ~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~ 162 (386)
T PRK09082 84 YGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISP 162 (386)
T ss_pred hCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCc
Confidence 89877775 899999999999999999999999999999999999999999999999999964 3588999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
+++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+++..+++++++||||.||++
T Consensus 163 ~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~ 241 (386)
T PRK09082 163 RTRLIILNTPHNPSGTVWSAADMRALWQLIAGT-DIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVT 241 (386)
T ss_pred cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccch
Confidence 899999999999999999999999999999999 9999999999999987655566666665568999999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+.+......++++.+.|.++..++.. .+++++++++.|+++++++.+.|++. |+++.+|+
T Consensus 242 G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~ 317 (386)
T PRK09082 242 GWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRA---EPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCE 317 (386)
T ss_pred hhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCC
Confidence 999999999999999999988777778999999999998874 36889999999999999999999986 89998999
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
||||+|+++++..+ .++.+++++|++++||.+.||+.|+. .+++|++++.+++++++++++|++
T Consensus 318 g~~~~~~~~~~~~~---------~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 318 GTYFQLVDYSAISD---------LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred eeEEEEEeccccCC---------CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 99999999974201 26789999988888999999998853 379999999998999999999875
No 36
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.2e-55 Score=448.58 Aligned_cols=363 Identities=28% Similarity=0.400 Sum_probs=305.5
Q ss_pred ChHHHHHHHHHHHHhc--CCCeEEcCCCCCCCCChHHHHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 012095 78 SKTVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELRSAICHKLKEENG 150 (471)
Q Consensus 78 ~~~~~~~~~~~~~~~~--g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-----~~~~Y~~~~G~~~lr~~ia~~~~~~~g 150 (471)
+.+.++.........+ ++++++|+.|+|++++|+.+.+++.+++.+ ...+|++..|.++||+++++++.+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g 94 (409)
T PRK07590 15 YLFPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG 94 (409)
T ss_pred chHHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 3444555545544443 567999999999999999999999888764 346899999999999999999988899
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE-----------EEEecCCCCCCCcCCHH
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-----------PVILPTRISENFLLDPK 219 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-----------~~~v~~~~~~~~~ld~e 219 (471)
+++++++|++|+|+++++..+. .+++|||+|++++|+|+.|...++..|.+ ++.++++.+++|.+|.+
T Consensus 95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~ 173 (409)
T PRK07590 95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP 173 (409)
T ss_pred CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence 9999999999999999999764 56789999999999999999999999997 89999876666666643
Q ss_pred HHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 220 ~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
. +++|+|++||||||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..++...+++|+++|
T Consensus 174 ~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~S 246 (409)
T PRK07590 174 E------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN-GSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRS 246 (409)
T ss_pred c------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc-CeEEEEEccchhhccCCCCCcchhhCCCcccceEEEec
Confidence 2 5789999999999999999999999999999999 99999999999998876444455556554568999999
Q ss_pred CCcccCccchhheeeEcCHHHHHHH------------HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 300 FSKAFAMTGWRLGYIAGPKHFVAAC------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 300 ~SK~~g~~G~R~G~v~~~~~~i~~l------------~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
|||.||++|+|+||+++++++++.+ .........+++.+.|.++..++... ...|++++++.|+++
T Consensus 247 fSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~ 324 (409)
T PRK07590 247 FSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPE--GKAQIKELIDYYMEN 324 (409)
T ss_pred CccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCC--cHHHHHHHHHHHHHH
Confidence 9999999999999999999998732 12222222357899999998988742 357899999999999
Q ss_pred HHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEee
Q 012095 368 RDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYA 445 (471)
Q Consensus 368 r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~ 445 (471)
++.+.+.|++. |+.+..|.+++|+|+++++.. ++.++++.|++++||.+.||+.|+. .+++||+++
T Consensus 325 r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 392 (409)
T PRK07590 325 AKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM-----------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF 392 (409)
T ss_pred HHHHHHHHHhc-CCceecCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence 99999999998 888888899999999998642 5678999888888999999999975 369999987
Q ss_pred cCHHHHHHHHHHHHHHH
Q 012095 446 ASLTTLQAAVERIKKGL 462 (471)
Q Consensus 446 ~~~e~i~~~~~~l~~~l 462 (471)
.+++++++++++|.+++
T Consensus 393 ~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 393 GSRENVLEAMERIKKAL 409 (409)
T ss_pred CCHHHHHHHHHHHHhhC
Confidence 78999999999998753
No 37
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=4e-55 Score=441.68 Aligned_cols=376 Identities=38% Similarity=0.652 Sum_probs=328.4
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..+.++.+.+....+ ...+++|+|+.|.|++++++.+.+++.+++......|++..|.++||+++++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 80 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNMV----QNYDNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKD 80 (387)
T ss_pred hhHHHHhCCccHHHHHHHHH----HhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 35677777777665554433 23457899999999988888999999998877677899899999999999999998
Q ss_pred HhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|++++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+. ++|.+|++.+++.++
T Consensus 81 ~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~ 159 (387)
T PRK07683 81 KYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEALENAIT 159 (387)
T ss_pred HhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHHHHhcC
Confidence 889888998 999999999999999999999999999999999999999999999999999864 568889999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.+++. ..++.++.+..+++++++||||.||+
T Consensus 160 ~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~ 237 (387)
T PRK07683 160 EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDK-NIFVLSDEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSM 237 (387)
T ss_pred cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CeEEEEecccccceeCCC-cCChhhccCCcCCeEEEeeccccccC
Confidence 8899999999999999999999999999999999 999999999999988653 33555554345789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++++.+.......+++.+.|.++..+|.+ ...++++.++.++++++.+.+.|.+. |+.+.+|
T Consensus 238 pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~ 313 (387)
T PRK07683 238 TGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTA---GKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKP 313 (387)
T ss_pred ccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCC
Confidence 9999999999999999998876555566788999999999986 35678899999999999999999987 8888899
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+||||+|+.++... .++.+++..|++++||.+.||+.|+. ++++||+++.+++++++++++|.+++++
T Consensus 314 ~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 314 TGAFYLFPSIGHFT----------MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeeEEEEEecccCC----------CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 99999999987420 15678888888888999999999875 4799999999999999999999998864
No 38
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=4.4e-55 Score=443.31 Aligned_cols=381 Identities=32% Similarity=0.529 Sum_probs=322.9
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
+.++.... +.+.++.....+.+..|+++|+|+.|.| ++++|+.+.+++.+++......|++..|..+||+++++++
T Consensus 5 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~ 83 (398)
T PRK08363 5 SERAMGVE-YAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKRE 83 (398)
T ss_pred hHHHHhcc-HHHHHHHHHHHHHHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHH
Confidence 33444443 3345555555555667889999999999 6888899999999888766667988999999999999999
Q ss_pred HHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 146 ~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+..+|+.+++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++...+++|.+|++.+++.+
T Consensus 84 ~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~ 163 (398)
T PRK08363 84 KRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKI 163 (398)
T ss_pred HHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhC
Confidence 99899889999999999999999999999999999999999999999999999999998884333456889999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
+++++++++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++. ..++..++. ..++++++||||.|+
T Consensus 164 ~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~li~Deay~~~~~~~~-~~~~~~~~~-~~~vi~~~SfSK~~~ 240 (398)
T PRK08363 164 TEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEH-DLPVISDEIYDLMTYEGK-HVSPGSLTK-DVPVIVMNGLSKVYF 240 (398)
T ss_pred CcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CeEEEEhhhhhhhccCCc-ccCHHHcCc-CCcEEEEecchhccC
Confidence 88899999999999999999999999999999999 999999999999888653 334445543 468999999999999
Q ss_pred ccchhheeeEc--CHHHHHHHHHHHhc---ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 306 MTGWRLGYIAG--PKHFVAACNKIQSQ---FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 306 ~~G~R~G~v~~--~~~~i~~l~~~~~~---~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
++|+|+||+++ ++++++.+...... ...+++.+.|.++..+|.. ..+|+++.++.++++++++.+.|.+++|
T Consensus 241 ~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~l~~~~~~~~~~~~~l~~~L~~~~~ 317 (398)
T PRK08363 241 ATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTG---PMDYLEEYMKKLKERRDYIYKRLNEIPG 317 (398)
T ss_pred CccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999997 77777776544321 2357899999999999975 4789999999999999999999998888
Q ss_pred CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l 458 (471)
+.+..|+||||+|++++... ..++.+++..+++++||.+.||+.|+. ++|+|++++.+++++++++++|
T Consensus 318 ~~~~~p~g~~~~~~~l~~~~---------~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l 388 (398)
T PRK08363 318 ISTTKPQGAFYIFPRIEEGP---------WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRF 388 (398)
T ss_pred CEecCCCeEEEEEEEeccCC---------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 88889999999999987520 014567777777778999999999975 4799999988889999999999
Q ss_pred HHHHHhh
Q 012095 459 KKGLLTL 465 (471)
Q Consensus 459 ~~~l~~~ 465 (471)
++++++.
T Consensus 389 ~~~~~~~ 395 (398)
T PRK08363 389 EEFMRER 395 (398)
T ss_pred HHHHHHh
Confidence 9998764
No 39
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=5.9e-55 Score=441.02 Aligned_cols=379 Identities=34% Similarity=0.591 Sum_probs=324.6
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
.+++++.......+.++.+.. ...+++|+|+.|+|++.+|+.+.+++.+++......|++..|.++||++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 81 (391)
T PRK07309 6 RFNKQLDKIEVSLIRQFDQSI----SDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVK 81 (391)
T ss_pred HHHhhhhhcCccHHHHHHHHH----HhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHH
Confidence 345666666655554544322 2235699999999999989999999998887656679999999999999999999
Q ss_pred HHhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..+|+++++ ++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.++.+. ++|.+|++.+++++
T Consensus 82 ~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~ 160 (391)
T PRK07309 82 EKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAI 160 (391)
T ss_pred HHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHHHHHh
Confidence 989987775 7999999999999999999999999999999999999999999999999999863 46789999999988
Q ss_pred cc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 226 TE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 226 ~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
++ ++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..+. .+++++++||||
T Consensus 161 ~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~-~~~ii~D~~y~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK 237 (391)
T PRK07309 161 LEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKY-DIFVISDEVYSELTYTGEPHVSIAEYL--PDQTILINGLSK 237 (391)
T ss_pred hccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEccccceeeCCCCCCCHHHhc--cCCEEEEecChh
Confidence 63 688999999999999999999999999999999 999999999999998654444544443 378999999999
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
.||++|+|+||+++++++++.+.........+++.+.|.++..+|.+ ...+....++.|+++++++.+.|++. |+.
T Consensus 238 ~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 313 (391)
T PRK07309 238 SHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTN---GKDDALPMKKEYIKRRDYIIEKMTDL-GFK 313 (391)
T ss_pred hccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 99999999999999999999998876555567899999999999986 24455678889999999999999988 899
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
+..|+||||+|+++|.... .++.+++++|++++||.+.||..|+. +++|||+++.+.+++++++++|++
T Consensus 314 ~~~p~gg~~~~~~l~~~~~---------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~ 384 (391)
T PRK07309 314 IIKPDGAFYIFAKIPAGYN---------QDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKE 384 (391)
T ss_pred ecCCCeeEEEEEECCCCCC---------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence 9999999999999885321 15678898888778999999999976 579999999988999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
++++++
T Consensus 385 ~~~~~~ 390 (391)
T PRK07309 385 YMEEHA 390 (391)
T ss_pred HHHhhc
Confidence 998764
No 40
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8e-55 Score=439.76 Aligned_cols=379 Identities=31% Similarity=0.558 Sum_probs=325.9
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
.+++++..+.+..+..+.+.. ....++++|+.|+|++++|+.+.+++.+.+... ...|++..|.+++|+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l 78 (389)
T PRK05957 3 QFTSRMDAVQSPIIPVVGQLI----RENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKL 78 (389)
T ss_pred hhhHHHHhcCCcHHHHHHHHH----HhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 356666666655443332222 233568999999999999999999998877543 357999999999999999999
Q ss_pred HHHhCCCCC-CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 146 KEENGLSYT-PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 146 ~~~~g~~~~-~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++.+|.+++ +++|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+ ++|.+|+++++++
T Consensus 79 ~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~ 156 (389)
T PRK05957 79 QQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQA 156 (389)
T ss_pred HHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHh
Confidence 998898777 6899999999999999999999999999999999999999899999999999975 4578999999999
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
+++++|+|++++||||||.++|.+++++|+++|++| |++||+||+|.++.|++....+...+.....++|+++||||.|
T Consensus 157 i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 235 (389)
T PRK05957 157 ITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEH-GIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAY 235 (389)
T ss_pred cCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhc
Confidence 988999999999999999999999999999999999 9999999999999886543334444434457899999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC-ee
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV-KM 383 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~-~~ 383 (471)
|++|+|+||+++++++++++.........+++.+.|.++..+|.. ...++++.++.++++|+.+.+.|++++|+ .+
T Consensus 236 g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 312 (389)
T PRK05957 236 GFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQV---GKSYCQQHLPEIAQVRQILLKSLGQLQDRCTL 312 (389)
T ss_pred cCccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 999999999999999999999988777778899999999999976 35778888888999999999999988774 77
Q ss_pred eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKK 460 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~ 460 (471)
.+|+||||+|++++.. .++.+++++|++++||.+.||+.|+. ++|+||+++. +++++++++++|.+
T Consensus 313 ~~~~gg~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~ 381 (389)
T PRK05957 313 HPANGAFYCFLKVNTD-----------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQ 381 (389)
T ss_pred cCCCeeEEEEEeCCCC-----------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHH
Confidence 8899999999999753 26789999998777999999999975 4699999987 88999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
.++++.
T Consensus 382 ~~~~~~ 387 (389)
T PRK05957 382 GLKTIV 387 (389)
T ss_pred HHHhhh
Confidence 988753
No 41
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-55 Score=439.10 Aligned_cols=358 Identities=23% Similarity=0.358 Sum_probs=307.2
Q ss_pred CCChHHHHHHHHHHHHhc-CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 012095 76 KPSKTVAITDQATALAQA-GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (471)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~-g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~ 154 (471)
.++++.++.+.+..+... |.++|+|+.|+|++++|+.+.+++.+... ....|++..|..+||+++++++++++|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~ 82 (374)
T PRK05839 4 EPYPFEKLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEESLREAQRGFFKRRFKIELK 82 (374)
T ss_pred CcchHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 455666777777777777 77999999999999999889998887653 3678988999999999999999999998899
Q ss_pred CCcEEEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 155 PDQILVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
+++|++|+|+++++..++.+++ .+||.|+++.|+|+.|...++..|++++.++++.+++|.+|++..+ + +++|+|
T Consensus 83 ~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v 159 (374)
T PRK05839 83 ENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLV 159 (374)
T ss_pred cceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEE
Confidence 9999999999999998888775 4789999999999999999999999999999987777888876543 2 468999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-----CCCCCceEEEecCCcccCcc
Q 012095 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-----PGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-----~~~~~~~i~~~S~SK~~g~~ 307 (471)
+++|||||||.+++.+++++|+++|++| |++||+||+|.++.+++ ..+++... ....+++|+++||||.|+++
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~-~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 237 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKH-DFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAP 237 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHc-CCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCc
Confidence 9999999999999999999999999999 99999999999986543 23333321 12347999999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++++.+.......+.+.+.|.++..++.. ++++++.++.++++++.+.+.| |+. .|.
T Consensus 238 GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~ 307 (374)
T PRK05839 238 GLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLD----DEHAEFFRNIYAKNLKLAREIL----GIT--IPP 307 (374)
T ss_pred cceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHhc----CCC--CCC
Confidence 999999999999999998887666677899999999888864 6789999999999999988766 333 689
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+|+|+|++++ +..+++++|++++||.+.||..|+. ++|+||+++.+++++++++++|+++++
T Consensus 308 gg~fi~~~~~--------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 308 ATFYVWLPVD--------------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eeEEEEEeCC--------------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 9999999986 3568999988767999999998874 489999999889999999999999874
No 42
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-55 Score=439.51 Aligned_cols=378 Identities=25% Similarity=0.410 Sum_probs=331.0
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++..+.++.+..+.+.+.+....+++.|+|+.|+|++.+++.+.+++.+.+.. ....|++..|.++||+++++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 81 (386)
T PRK07550 2 LNPLIAALFPPPIPEVRAWLAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYS 81 (386)
T ss_pred cchhhhhcCChHHHHHHHHHHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHH
Confidence 35566667777788888877777677889999999999988888999998887654 34679889999999999999999
Q ss_pred HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 147 ~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+++++++++.+|+++++++++
T Consensus 82 ~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~ 161 (386)
T PRK07550 82 RLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT 161 (386)
T ss_pred HHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc
Confidence 99998889999999999999999999999999999999999999999999999999999999866778899999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.+++....++.......+++++++||||.+|+
T Consensus 162 ~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~-~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 240 (386)
T PRK07550 162 PRTRAIALVTPNNPTGVVYPPELLHELYDLARRH-GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYAL 240 (386)
T ss_pred ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccC
Confidence 8999999999999999999999999999999999 999999999999876533222333322235689999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+.+.......+++.++|.++..+|.. .++|+++.++.++++++.+.+.|.+++++.+ .+
T Consensus 241 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 316 (386)
T PRK07550 241 TGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPN---LADWRAGNRAEIARRRDAFRAVFARLPGWEL-LA 316 (386)
T ss_pred cccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHHHHhCCCcee-CC
Confidence 9999999999999999999888777788999999999999975 4788999999999999999999998767755 46
Q ss_pred CcceEEeEecCC-ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFST-YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 387 ~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~~ 461 (471)
.+++|+|++++. . .++.+++++|++++||.+.||..|+. ++++||+++. +++++++++++|.++
T Consensus 317 ~g~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 317 SGAYFAYVRHPFPD-----------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred CceEEEEecCCCCC-----------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 789999999875 2 26889999988878999999999974 4799999997 889999999999875
No 43
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.7e-55 Score=443.51 Aligned_cols=374 Identities=23% Similarity=0.385 Sum_probs=317.5
Q ss_pred HHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 012095 80 TVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (471)
Q Consensus 80 ~~~~~~~~~~~~~~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~ 154 (471)
+..+..........|+++|+|+.|+|+ +++++.+.+++.+++... ..+|+|..|..+||+++++++.+ .+..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~ 94 (401)
T TIGR01264 16 IRAIVDNMKVKPNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIE 94 (401)
T ss_pred HHHHHHHHHhhhhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCC
Confidence 344444444444557789999999985 777889999998887654 35799999999999999999986 455688
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i 234 (471)
+++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++++.++++++|++.+++.++++++++++
T Consensus 95 ~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 174 (401)
T TIGR01264 95 ADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIV 174 (401)
T ss_pred HHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEE
Confidence 99999999999999999999999999999999999999999999999999999876667899999999998888999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheee
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 314 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v 314 (471)
++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++..+.. ..++|+++||||.|+++|+|+||+
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~~~GlRiG~i 252 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQ-CLPIIADEIYGDMVFSGATFEPLASLSS-TVPILSCGGLAKRWLVPGWRLGWI 252 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEhhhhhhccCCcccccHHHcCC-CCcEEEEccCcccCCCccceEEEE
Confidence 99999999999999999999999999 9999999999999987654455555543 346999999999999999999999
Q ss_pred EcCH------HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc
Q 012095 315 AGPK------HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 388 (471)
Q Consensus 315 ~~~~------~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~ 388 (471)
++++ ++++.+.+... ...+++++.|.++..+|.+. .++++++.++.++++|+.+.+.|++++|+.+..|++
T Consensus 253 v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~--~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~ 329 (401)
T TIGR01264 253 IIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRT--PQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSG 329 (401)
T ss_pred EecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCe
Confidence 9874 35555555433 24567899999999999752 368999999999999999999999987888888999
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
|+|+|++++... . . ...++.++++.|++++||.+.||+.|+.++++|++++.+++++++++++|.++++++
T Consensus 330 g~f~~~~~~~~~-~--~---~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 330 AMYMMVGIEMEH-F--P---EFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred eeEEEEEecccc-c--C---CCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 999999986410 0 0 012567899998877799999999998889999999998899999999999998753
No 44
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-54 Score=436.98 Aligned_cols=380 Identities=31% Similarity=0.540 Sum_probs=327.5
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++....++.+.++...+......|.++|+|+.|.|++++|+.+.+++.+... ...+|++..|..++|+++++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~- 80 (397)
T PRK07568 3 ISKRVLNMPASPIRKLVPYADEAKKRGIKVYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYK- 80 (397)
T ss_pred hhhHhhhCCcchHHHHHHHHHHHHhhCCCEEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHH-
Confidence 4566666666777666655544444567899999999999889999998877643 46789999999999999999998
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcC-CHHHHHhhhc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL-DPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~l-d~e~l~~~l~ 226 (471)
.+|..+++++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.++++.++++.+ +++.++++++
T Consensus 81 ~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~ 160 (397)
T PRK07568 81 KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT 160 (397)
T ss_pred HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC
Confidence 578888999999999999999999999999999999999999999999999999999999875556654 6899999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++||||||.+++.+++++|+++|+++ +++||+||+|.++.|++....++..+....+++++++||||.||+
T Consensus 161 ~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~ 239 (397)
T PRK07568 161 PKTKAILISNPGNPTGVVYTKEELEMLAEIAKKH-DLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSA 239 (397)
T ss_pred ccceEEEEECCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccC
Confidence 8999999999999999999999999999999999 999999999999988765455666665446899999999999999
Q ss_pred cchhheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 307 TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 307 ~G~R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+|+|+||++++ +++++.+.+.... ..+++.+.|.++..+|.. .+.+++++++.|+++++.+.+.|++++|+.+..
T Consensus 240 ~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 315 (397)
T PRK07568 240 CGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDT---PESYFDEVREEYKKRRDILYEELNKIPGVVCEK 315 (397)
T ss_pred CCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 99999999985 7888887765443 457899999999999975 468899999999999999999999987888889
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHc-----CCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVALVPGDAFGD-----DTCIRISYAASLTTLQAAV 455 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~-----~gV~v~pg~~f~~-----~~~iRis~~~~~e~i~~~~ 455 (471)
|+||||+|++++.. ++.+++++|+++ .||.+.||..|+. ++++||+++.+++++++++
T Consensus 316 p~g~~~~~~~l~~~------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~ 383 (397)
T PRK07568 316 PKGAFYIIAKLPVD------------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAM 383 (397)
T ss_pred CCcceEEEEecCCC------------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHH
Confidence 99999999999742 577899988864 5999999998842 3699999998889999999
Q ss_pred HHHHHHHHhhC
Q 012095 456 ERIKKGLLTLR 466 (471)
Q Consensus 456 ~~l~~~l~~~~ 466 (471)
++|.++++++.
T Consensus 384 ~~l~~~l~~~~ 394 (397)
T PRK07568 384 EILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHhh
Confidence 99999998754
No 45
>PLN02231 alanine transaminase
Probab=100.00 E-value=6e-55 Score=452.02 Aligned_cols=367 Identities=20% Similarity=0.320 Sum_probs=301.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc--C--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE--G--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~--~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
+++|+|+.+.+.|+. .+++.+.+.+.+ + ..+|++..|.++||++|++++.+++|.++++++|++|+|+++++..
T Consensus 129 p~~i~~~~~~~~fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~ 206 (534)
T PLN02231 129 PSLLDKSETHGLFSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHM 206 (534)
T ss_pred CccCCCCCccccCCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHH
Confidence 468888877777754 444445555543 2 4679999999999999999999989999999999999999999999
Q ss_pred HHHHhcC-CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCccc
Q 012095 171 AVLAVCS-PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGS 243 (471)
Q Consensus 171 ~~~~l~~-~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~ 243 (471)
++++++. +||.|+++.|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++|+|+++|||||||.
T Consensus 207 ~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~ 286 (534)
T PLN02231 207 MMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQ 286 (534)
T ss_pred HHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCc
Confidence 9999984 89999999999999999999999999999998777899999999998864 6899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC-CCCccccccCCC------CCCceEEEecCCccc-CccchhheeeE
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHTSFASLPG------MWERTLTVNGFSKAF-AMTGWRLGYIA 315 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~------~~~~~i~~~S~SK~~-g~~G~R~G~v~ 315 (471)
++|.+++++|+++|++| +++||+||+|.++.|+ +....++..+.. ...++|+++||||.+ |++|||+||++
T Consensus 287 vls~e~l~~Iv~~a~~~-~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 287 VLAEENQRDIVEFCKQE-GLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence 99999999999999999 9999999999999995 334445544321 123699999999976 89999999998
Q ss_pred c---CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccC----CChH---HHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 316 G---PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY----AGGE---VVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 316 ~---~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~----~~~~---~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+ ++++++.+.+... ...|++.+.|.++..+++.+. .... +...+++.|+++++++.+.|++++|+.+.+
T Consensus 366 ~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~ 444 (534)
T PLN02231 366 VTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCNK 444 (534)
T ss_pred EecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 6 7899999988765 466788999999988886421 1123 345678899999999999999998999999
Q ss_pred CCcceEEeEec--CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 386 p~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
|+||||+|+++ |.. ...........++..++.+|++++||.++||+.|+. ..+||+++..++++++++++||.+
T Consensus 445 p~Ggfylw~~l~lp~~-~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~ 523 (534)
T PLN02231 445 AEGAMYLFPRIHLPQK-AIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAIVSRLTE 523 (534)
T ss_pred CCeeeEEeccccCcHH-HHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 99999999665 321 000000000113455778899888999999999985 246999998899999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
+++++.
T Consensus 524 ~~~~~~ 529 (534)
T PLN02231 524 FHKSFM 529 (534)
T ss_pred HHHHHH
Confidence 988764
No 46
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=2.7e-54 Score=436.11 Aligned_cols=374 Identities=33% Similarity=0.564 Sum_probs=324.4
Q ss_pred cccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 012095 71 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENG 150 (471)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 150 (471)
++..++++.+.++...+. ..++|+|+.|.|+.+.|+.+.+++.+.+.....+|++..|.++||+++++++.+.+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~-----~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g 79 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAV-----RTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYG 79 (387)
T ss_pred hhhhcCccHHHHHHHHHh-----hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 455566665655554442 246899999999988888888888888776667898899999999999999999899
Q ss_pred CCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhhccC
Q 012095 151 LSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLTEK 228 (471)
Q Consensus 151 ~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~~~ 228 (471)
.+++++ +|++|+|+++++..++.+++++||.|+++.|+|..|...++..|++++.++++++ ++|.+|++++++.++++
T Consensus 80 ~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 159 (387)
T PRK07777 80 LEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPR 159 (387)
T ss_pred CCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcc
Confidence 888786 7999999999999999999999999999999999999999999999999999765 46889999999999888
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
+++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++..+.++..+++..+++++++||||.||++|
T Consensus 160 ~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 238 (387)
T PRK07777 160 TRALIVNSPHNPTGTVLTAAELAAIAELAVEH-DLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTG 238 (387)
T ss_pred cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhc-CcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcC
Confidence 99999999999999999999999999999999 99999999999998866544455555544678999999999999999
Q ss_pred hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc
Q 012095 309 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 388 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~ 388 (471)
+|+||+++++++++.+.........+.+.+.|.++..++.. .+.|++++++.++++++.+.+.|.++ |+++.+|+|
T Consensus 239 lRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g 314 (387)
T PRK07777 239 WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDH---EDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAG 314 (387)
T ss_pred ceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCc
Confidence 99999999999999998877766667888899998888875 46889999999999999999999987 888889999
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-----DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-----~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+||+|++++.. + ..++.+|+++|++++||.+.||..|+. +++|||+++.+++++++++++|+++..
T Consensus 315 ~~~~~~~~~~~-~--------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 315 TYFLCADPRPL-G--------YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred ceEEEeccccc-C--------CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 99999997631 0 026789999998878999999998863 358999999999999999999988653
No 47
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=5.8e-54 Score=434.55 Aligned_cols=374 Identities=26% Similarity=0.417 Sum_probs=321.1
Q ss_pred CCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 012095 76 KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (471)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~ 154 (471)
.++.+..+...+...++.|+++++|+.|+|+..+|+.+.+++.+.+.. ....|++..|.++||+++++++++.+|+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~ 89 (395)
T PRK08175 10 PPYVFNITAELKMAARRRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDID 89 (395)
T ss_pred CchHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 333333333444555567889999999999988888788888776653 3578999999999999999999998898888
Q ss_pred CC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc---cCCc
Q 012095 155 PD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSR 230 (471)
Q Consensus 155 ~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---~~~~ 230 (471)
++ +|++|+|+++++..++..+++|||+|++++|+|+.+...++..|++++.++++.+++ +.++++++++ ++++
T Consensus 90 ~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~ 166 (395)
T PRK08175 90 PESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPK 166 (395)
T ss_pred CCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCce
Confidence 87 899999999999999999999999999999999999999999999999999976544 4788887775 4789
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchh
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 310 (471)
+|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..++...+++++++||||.||++|+|
T Consensus 167 ~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlR 245 (395)
T PRK08175 167 MMILGFPSNPTAQCVELEFFEKVVALAKRY-DVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWR 245 (395)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchh
Confidence 999999999999999999999999999999 9999999999999887655556655554357889999999999999999
Q ss_pred heeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcce
Q 012095 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 390 (471)
Q Consensus 311 ~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~ 390 (471)
+||+++++++++++.+.......+++++.|.++..+|.. .+.+++++++.|+++++.+.+.|+++ |+.+..|.+|+
T Consensus 246 iG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~ 321 (395)
T PRK08175 246 IGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASM 321 (395)
T ss_pred heeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEE
Confidence 999999999999999888767777888899999999975 46889999999999999999999998 88888899999
Q ss_pred EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
|+|+++++... ..++.+++++|++++||.+.||..|+. ++++||+++.+++.+++++++|.+++++.
T Consensus 322 ~i~i~l~~~~~--------~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 322 YVWAKIPEPYA--------AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred EEEEECCcccC--------CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 99999986421 014688998888778999999999875 46999999888899999999999999764
No 48
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=1.5e-53 Score=432.48 Aligned_cols=375 Identities=25% Similarity=0.436 Sum_probs=319.9
Q ss_pred hHHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 012095 79 KTVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSY 153 (471)
Q Consensus 79 ~~~~~~~~~~~~~~~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~ 153 (471)
++.++.........+|.++|+|+.|+|+ +++++.+.+++.+.+... ...|++..|..++|++++++++..+|.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 94 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKL 94 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCC
Confidence 4455555555555568899999999985 677889999999887654 35798999999999999999998788888
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
++++|++|+|+++++.+++++++++||+|++++|+|..|...++..|++++.++++.++++.+|++.+++++++++++++
T Consensus 95 ~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 174 (403)
T TIGR01265 95 TADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAIV 174 (403)
T ss_pred CHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEEE
Confidence 89999999999999999999999999999999999999999999999999999987666788999999999988899999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+++||||||.+++.+++++|+++|+++ |++||+||+|.++.+++....++..+.. ..++|+++||||.|+++|+|+||
T Consensus 175 i~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~ 252 (403)
T TIGR01265 175 VINPSNPCGSVFSRDHLQKIAEVARKL-GIPIIADEIYGHMVFGDAPFIPMASFAS-IVPVLSLGGISKRWVVPGWRLGW 252 (403)
T ss_pred EecCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCccchhhhcc-CCcEEEEeecccccCCCcceEEE
Confidence 999999999999999999999999999 9999999999999987654455555543 35799999999999999999999
Q ss_pred eEcC--HH-----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 314 IAGP--KH-----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 314 v~~~--~~-----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
++++ ++ +++.+..... ...+++.+.|.++..+|.+. ...++++.++.++++++.+.+.|+.++|+.+..|
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 253 IIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENT--PQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred EEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 9984 23 4444444432 24568999999999999752 3688999999999999999999998888888889
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.+|+|+|++++...- ....++.++++.|++++||.+.||+.|+.++|+||+++.+++++++++++|.+++.+
T Consensus 330 ~~g~f~~~~~~~~~~------~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 330 EGAMYLMVKLELELF------PEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred CceeEEEEecccccc------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 999999999975310 001257789998887789999999999988999999999889999999999998865
No 49
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.3e-53 Score=433.36 Aligned_cols=385 Identities=28% Similarity=0.431 Sum_probs=313.4
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++..+.++.+..+.+.+......|+++|+|+.|+| ++++|+.+.+++.+.+.. ...|++..|.++||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~ 86 (404)
T PRK09265 8 SKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQ 86 (404)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHh
Confidence 445556666666666777767667889999999998 466788888888876653 5789999999999999999998
Q ss_pred HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 147 ~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
...+..+++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.++++.+++|.+|+++++++++
T Consensus 87 ~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~ 166 (404)
T PRK09265 87 QKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT 166 (404)
T ss_pred ccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc
Confidence 65544688999999999999999999999999999999999999999999999999999988766678899999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+.. ..++|+++||||.||+
T Consensus 167 ~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~~~ 244 (404)
T PRK09265 167 PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQH-NLIIFADEIYDKILYDGAVHISIASLAP-DLLCVTFNGLSKAYRV 244 (404)
T ss_pred ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhhhccCCCCCcCCHHHcCC-CceEEEEecchhhccC
Confidence 8899999999999999999999999999999999 9999999999999887654555555543 3478999999999999
Q ss_pred cchhheeeEc--CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 307 TGWRLGYIAG--PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 307 ~G~R~G~v~~--~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
+|+|+||+++ +++ +++.+... .....+++.++|.++.++|..... ...+....+.+.++|+.+.+.|++++|
T Consensus 245 pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~~ 322 (404)
T PRK09265 245 AGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQS-INELILPGGRLYEQRDRAWELLNAIPG 322 (404)
T ss_pred cccceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchh-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999995 444 34444332 234567899999999999964111 111222235677889999999998888
Q ss_pred CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l 458 (471)
+.+..|++|||+|++++.... ...++.+++..+++++||.+.||+.|+. ++|+|++++.+++++++++++|
T Consensus 323 ~~~~~p~~g~~l~~~~~~~~~-------~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl 395 (404)
T PRK09265 323 VSCVKPKGALYAFPKLDPKVY-------PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRI 395 (404)
T ss_pred CcccCCCcceEEEEEeccccc-------CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 998999999999999975210 0013455555566677999999999963 5799999988999999999999
Q ss_pred HHHHHhhC
Q 012095 459 KKGLLTLR 466 (471)
Q Consensus 459 ~~~l~~~~ 466 (471)
+++++..+
T Consensus 396 ~~~l~~~~ 403 (404)
T PRK09265 396 GRFLSGYR 403 (404)
T ss_pred HHHHHHhc
Confidence 99988654
No 50
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=7.3e-54 Score=427.00 Aligned_cols=342 Identities=26% Similarity=0.484 Sum_probs=305.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHHHHHHHh
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~~~l 175 (471)
+++|+.|+|++++++.+.+++.+... ...+|++..|..+||+++++++++.+|++++++ +|++|+|+++++..++.++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~ 80 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVF 80 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHH
Confidence 68999999999989999999988764 467898889999999999999999999988897 9999999999999999999
Q ss_pred cCCC---CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 176 CSPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 176 ~~~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++| |+|++++|+|+.|...++..|++++.++++.+++|.+|+++++++++++++++++++||||||.+++.+++++
T Consensus 81 ~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 81 IDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred cCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHH
Confidence 9987 6999999999999999999999999999976678889999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|+++|++| +++||+||+|.++.+++ ...++..+. .+++|+++||||.+|++|+|+||+++++++++.+......+.
T Consensus 161 l~~~a~~~-~~~ii~De~y~~~~~~~-~~~~~~~~~--~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~ 236 (350)
T TIGR03537 161 TIAMCREH-GIILCSDECYTEIYFGE-PPHSALEVG--IENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFG 236 (350)
T ss_pred HHHHHHHc-CcEEEEeccccccccCC-CCCchhhcC--cCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhc
Confidence 99999999 99999999999887754 233343332 478999999999999999999999999999999998877777
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
.+.+.+.|.++.+++.+ ..|+++.++.++++++.+.+.|.+. |+++.+|+||||+|+++|+. .+
T Consensus 237 ~~~~~~~q~~~~~~l~~----~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~~~~g~~~~~~~~~~~-----------~~ 300 (350)
T TIGR03537 237 VASPDFVQAAAKAAWSD----DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLWVKVPSG-----------ID 300 (350)
T ss_pred cCCCHHHHHHHHHHhCC----cHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeEEEEEEECCCC-----------CC
Confidence 77787888888888763 6788899999999999999999987 88888999999999999864 26
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
+.++++.|+++ ||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 301 ~~~l~~~L~~~-gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 301 AKDYALRLLEN-GIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred HHHHHHHHHHC-CEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 78899998875 999999999975 589999998888999999999875
No 51
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-53 Score=397.43 Aligned_cols=362 Identities=24% Similarity=0.426 Sum_probs=324.8
Q ss_pred CCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 94 GVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 94 g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
++++|.|+.|+|. +.+.+++.+|+.+++..+ ..+|+|..|....|+++|+|+.+.....+++++|++|+|.++||
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259|consen 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred CceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHH
Confidence 3489999999975 556788999999998875 57899999999999999999988777778999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHH
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
+.++.+|.+||..||+|.|+|+.|...+...|.+++.+.+.++.+|.+|++.++++++++|.+|+|+||+||+|.+++.+
T Consensus 140 e~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259|consen 140 ELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH--------HH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--------HF 320 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~--------~~ 320 (471)
.|++|+++|+++ +++||.||+|.+++|++.+..++..+.. --.+|.++|+||.+=.||||+||++.++ .+
T Consensus 220 HL~kiae~A~kl-gi~vIaDEVY~~~vfg~~pfvpmg~fss-iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~ 297 (447)
T KOG0259|consen 220 HLKKIAETAKKL-GIMVIADEVYGHTVFGDKPFVPMGKFSS-IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKV 297 (447)
T ss_pred HHHHHHHHHHHh-CCeEEehhhcceeecCCCCccchhhccc-cCceEeecccccccccCCceeeeEEEecccccccchHH
Confidence 999999999999 9999999999999999887777776654 3578999999999989999999998743 34
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCc
Q 012095 321 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTY 399 (471)
Q Consensus 321 i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~ 399 (471)
++.+.+... .+.+++++.|.|.-..|... .+++.......++.+.++.++.|+++|++. ...|+|.+|+|++++-.
T Consensus 298 ~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kT--p~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s 374 (447)
T KOG0259|consen 298 VQGIKNFLD-IIPGPATIIQGALPDILEKT--PEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLS 374 (447)
T ss_pred HHHHHHHHh-ccCCccHhHHHHhHHHHHhC--hHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchh
Confidence 566666544 46689999999999999753 578999999999999999999999999998 57899999999987632
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
-+..+.++.+|+.+|.++..|.+.||..|+.++|+|++++...+.+++++.||+.+..+..
T Consensus 375 ------~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 375 ------LFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred ------hhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHhhh
Confidence 1112357889999999999999999999999999999999999999999999999987654
No 52
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.9e-54 Score=443.21 Aligned_cols=361 Identities=20% Similarity=0.334 Sum_probs=300.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCCCcEEEe
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENGL--SYTPDQILVS 161 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~--~~~~~~i~it 161 (471)
.+|+|+.++|.+.. +.+.+.+..... .....|++..|.++||++|++++++.+|. ++++++|++|
T Consensus 39 g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit 117 (468)
T PLN02450 39 GIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLT 117 (468)
T ss_pred eeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEc
Confidence 58999999998765 555555544311 12345988889999999999999988774 4689999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEE
Q 012095 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (471)
Q Consensus 162 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i 234 (471)
+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.|+++.+++|.+|++.+++++.+ ++|+|++
T Consensus 118 ~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l 197 (468)
T PLN02450 118 AGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLI 197 (468)
T ss_pred cChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEE
Confidence 999999999999999999999999999999988887 589999999998778899999999988753 7899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC--------CCCCceEEEecCCcccCc
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP--------GMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--------~~~~~~i~~~S~SK~~g~ 306 (471)
+|||||||.++|.+++++|+++|++| +++||+||+|.++.|++....++..+. ...+++++++||||.||+
T Consensus 198 ~nP~NPTG~~~s~e~l~~ll~~a~~~-~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l 276 (468)
T PLN02450 198 TNPSNPLGTTTTRTELNLLVDFITAK-NIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGL 276 (468)
T ss_pred ecCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCC
Confidence 99999999999999999999999999 999999999999888764333433221 125799999999999999
Q ss_pred cchhheeeEcCHH-HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 307 TGWRLGYIAGPKH-FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 307 ~G~R~G~v~~~~~-~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+|+|+||++++++ +++.+.+.... .+++.++|.++..+|.++.+...++++.+++|+++++.+.+.|+++ |+.+.+
T Consensus 277 ~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~~ 353 (468)
T PLN02450 277 PGFRVGAIYSNDEMVVSAATKMSSF--GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCLK 353 (468)
T ss_pred CCccEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence 9999999999754 66766665432 3478999999999998743323578899999999999999999998 898889
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~~l 462 (471)
|++|||+|++++..... . ......+++++|++++||.+.||+.|+. ++||||+|+. +++++++++++|++++
T Consensus 354 ~~~g~flwi~l~~~~~~--~---~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l 428 (468)
T PLN02450 354 SNAGLFCWVDMRHLLKS--N---TFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFV 428 (468)
T ss_pred CCceEEEEEEchHhcCc--C---CchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999753210 0 0113467888898888999999999875 5899999997 8899999999999998
Q ss_pred HhhC
Q 012095 463 LTLR 466 (471)
Q Consensus 463 ~~~~ 466 (471)
++.+
T Consensus 429 ~~~~ 432 (468)
T PLN02450 429 ESDS 432 (468)
T ss_pred Hhcc
Confidence 7654
No 53
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-54 Score=437.50 Aligned_cols=357 Identities=23% Similarity=0.329 Sum_probs=287.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCC-C--CCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSY-T--PDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~-~--~~~i~it~G~~~al~~~ 171 (471)
++|+|+.|+|++++|+.+.++.. ++. +. +|+++.|.++||++|++++.+ .++... . .++|++|+|+++++..+
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~-~~~-~~-~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~ 177 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVD-GII-GD-NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYI 177 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHH-HHh-cC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 47999999999999998888554 443 33 599999999999999996644 333222 2 34999999999999998
Q ss_pred HHH-----hcCCCCeEEEcCCCCCChHHHHHHcC--CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccC
Q 012095 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 172 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~ 244 (471)
+.+ +++|||+|++++|+|+.|...+++.| ++++.++.+++++|.+|++++++++++++|+|+|+|||||||.+
T Consensus 178 ~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v 257 (527)
T PRK09275 178 FDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVA 257 (527)
T ss_pred HHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCC
Confidence 886 68999999999999999999988885 45566665566789999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhC-CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH----
Q 012095 245 YPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---- 319 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~---- 319 (471)
++++++++|+++|+++ ++++||+||+|.++.+. ..++... ..+++|+++||||.|||+|||+||++++++
T Consensus 258 ~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~ 332 (527)
T PRK09275 258 MSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV--LPYNTILVYSFSKYFGATGWRLGVIALHEDNVFD 332 (527)
T ss_pred CCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh--CCCCEEEEeehhhhccCcHhHHhhhhcCchhHHH
Confidence 9999999999999542 28999999999998642 2333333 247899999999999999999999999876
Q ss_pred -HHHHH--------------------------------HHHHhcccCCCChHHHHHH-----HHHHhccCCChHHHHHHH
Q 012095 320 -FVAAC--------------------------------NKIQSQFTSGASSISQKAG-----VAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 320 -~i~~l--------------------------------~~~~~~~~~~~~~~~q~aa-----~~~L~~~~~~~~~~~~~~ 361 (471)
+++.+ +++..+.+.|++++.|.++ .++|+. .+.++++++
T Consensus 333 ~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~---~~~~~~~~~ 409 (527)
T PRK09275 333 KLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE---EDAYKKAMK 409 (527)
T ss_pred HHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC---chHHHHHHH
Confidence 43333 4666777889999999872 344554 467899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc----CCcccC-CCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 362 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY----GSEAEG-FGKIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~----~~~~~~-~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
+.|++|++.+.+.|. + ++...+|+|+||+|++++... +..... .....++.+|+.+|++++||.+.||+.|+.
T Consensus 410 ~~~~~Rr~~l~~~Lg-~-~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~ 487 (527)
T PRK09275 410 DIIRRRYKALYEGLG-L-PEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGG 487 (527)
T ss_pred HHHHHHHHHHHHHcC-C-CCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCC
Confidence 999999999999983 2 344457999999999997421 000000 000125789999999999999999999985
Q ss_pred -CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 437 -DTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 -~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
++++|+|++. +++++.++.++|++++.++
T Consensus 488 ~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 488 PEWSVRVSLANLNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred CCCeEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 5789999996 8899999999999998765
No 54
>PLN02368 alanine transaminase
Probab=100.00 E-value=1.3e-53 Score=429.78 Aligned_cols=329 Identities=23% Similarity=0.338 Sum_probs=281.1
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCC--------C----------------------CChHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD--------F----------------------DTPVLIAEA 116 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~--------~----------------------~~p~~v~~a 116 (471)
.+++++..++.+....+...+.++++.|.++|+|++|+|+ + .+|+.+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred hcCHHHHhhhhhcCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 3677788888887778888888888889999999999997 3 255666666
Q ss_pred HHHHHH--cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChH
Q 012095 117 GINAIR--EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYP 193 (471)
Q Consensus 117 ~~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~ 193 (471)
...... .+..+|++..|.++||++|++++++.+|+++++++|++|+|+++++..++.+++ +|||+|++++|+|+.|.
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~ 169 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS 169 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence 544221 236789999999999999999999988988999999999999999999999987 79999999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
..++..|++++.++++.+++|.+|++.+++.+++ ++|+++++|||||||.+++++++++|+++|++| +++||+
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~-~~~II~ 248 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQE-RLVLLG 248 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHc-CCEEEE
Confidence 9999999999999998777899999999999864 689999999999999999999999999999999 999999
Q ss_pred ccCCCccccCCC-CccccccC----CC---CCCceEEEecCCccc-CccchhheeeE---cCHHHHHHHHHHHhcccCCC
Q 012095 268 DEIYEHIIYAPA-THTSFASL----PG---MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 268 De~y~~~~~~~~-~~~~~~~~----~~---~~~~~i~~~S~SK~~-g~~G~R~G~v~---~~~~~i~~l~~~~~~~~~~~ 335 (471)
||+|.++.|++. .+.++..+ .. ..+++|+++||||.| ||+|||+||++ +++++++.+.+... ...++
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~-~~~~~ 327 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS-IALSP 327 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc-ccCCC
Confidence 999999999764 33444332 11 135899999999999 89999999998 58999999988753 45679
Q ss_pred ChHHHHHHHHHHhccCC----ChHHH---HHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecC
Q 012095 336 SSISQKAGVAALGLGYA----GGEVV---SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~----~~~~~---~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~ 397 (471)
+.++|.++.++|..... ...+. +++++.|++||+++.+.|++++|+.+..|+|+||+|++++
T Consensus 328 ~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~ 396 (407)
T PLN02368 328 NVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIK 396 (407)
T ss_pred CcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCC
Confidence 99999999999975310 01234 4578999999999999999999999999999999998775
No 55
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.1e-53 Score=436.03 Aligned_cols=363 Identities=21% Similarity=0.367 Sum_probs=298.3
Q ss_pred CeEEcCCCCCCC--CC-hHHHHHHHHHHHHc--------CCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcEEEeC
Q 012095 96 SVIRLAAGEPDF--DT-PVLIAEAGINAIRE--------GFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSN 162 (471)
Q Consensus 96 ~~i~l~~g~~~~--~~-p~~v~~a~~~~~~~--------~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~it~ 162 (471)
.+|+|+.+++.+ +. ++.+++.....+.. ....|++..|.++||++|++++++.+| +++++++|++|+
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~ 126 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSG 126 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEcc
Confidence 589999999877 44 55565544432111 234688889999999999999999888 668999999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCcCCHHHHHhhh------ccCCcEEEEc
Q 012095 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKL------TEKSRLLILC 235 (471)
Q Consensus 163 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l------~~~~~~i~i~ 235 (471)
|+++++..++.++++|||.|++++|+|+.|...++ ..|++++.|+++.+++|++|++.+++++ ..++|+|+++
T Consensus 127 Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~ 206 (496)
T PLN02376 127 GATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILT 206 (496)
T ss_pred chHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEc
Confidence 99999999999999999999999999999998777 5899999999987678899999998653 2468999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-------CCceEEEecCCcccCccc
Q 012095 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 236 ~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S~SK~~g~~G 308 (471)
|||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++.++... .+++++++||||.||++|
T Consensus 207 nP~NPTG~~~s~e~l~~L~~~a~~~-~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpG 285 (496)
T PLN02376 207 NPSNPLGTMLDKDTLTNLVRFVTRK-NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPG 285 (496)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCc
Confidence 9999999999999999999999999 99999999999999877555565544211 146788999999999999
Q ss_pred hhheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 309 WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 309 ~R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
+|+||++++ +.+++.+...... ...+.+.|.++..+|.++.+.+.++.+.++.|+++++.+.+.|++. |+.+.+|+
T Consensus 286 lRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~ 362 (496)
T PLN02376 286 FRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSN 362 (496)
T ss_pred ceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCC
Confidence 999999985 5666665554432 2478999999999998643224567778999999999999999987 88888899
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
||+|+|+++++.... .. ...+..++++.|+++.||.+.||+.|+. ++||||+|+. +++++++++++|++++.+
T Consensus 363 aG~flwi~l~~~~~~-~~---~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 363 AGLFAWMDLRHLLRD-RN---SFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred ceEEEEEEchhhhcc-CC---chhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 999999999754210 00 0113468899999888999999999974 5899999996 889999999999999975
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
.+
T Consensus 439 ~~ 440 (496)
T PLN02376 439 NK 440 (496)
T ss_pred hh
Confidence 43
No 56
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=7.8e-53 Score=430.94 Aligned_cols=342 Identities=21% Similarity=0.269 Sum_probs=295.8
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+..+++|+.|.|+.++++.+.+++.+... ....|++..|..+||+++++++.+..+ .+++|++|+|++++|..+++
T Consensus 84 ~~~~i~L~~g~p~~~~~p~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~~~~~ 159 (431)
T PRK15481 84 GTPLHDLAGGNPDPQRLPDLSRYFARLSR-TPRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIERLLC 159 (431)
T ss_pred cchhhhhhcCCCChhHhHHHHHHHHHhhh-hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHHHHHH
Confidence 34579999999988887778787777553 346799999999999999999875433 45799999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc-CCCCCcccCCCHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~-~p~NPtG~~~~~~~l~~ 252 (471)
++++|||+|++++|+|+.|...++..|++++.+|++.+ ++|++.+++++++++|+++++ |||||||.+++.+++++
T Consensus 160 ~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~ 236 (431)
T PRK15481 160 AHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAA 236 (431)
T ss_pred HhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHH
Confidence 99999999999999999999999999999999998643 389999999998889999886 99999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|+++|++|++++||+||+|.++.+++. .+... ...+++|+++||||.|| +|+|+||+++++++++.+.+......
T Consensus 237 l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~--~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~ 311 (431)
T PRK15481 237 LRNLLARYPQVLVIIDDHFALLSSSPY--HSVIP--QTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGT 311 (431)
T ss_pred HHHHHHhcCCceEEecCchhhhccCCC--CCCCc--CCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccc
Confidence 999999876899999999999976542 22222 23479999999999999 99999999999999999987766656
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
.+++.++|.++..+|+++.. .+|++++++.|+++++.+.+.|++. |+.+..|++|||+|++++. +
T Consensus 312 ~~~s~~~q~a~~~~l~~~~~-~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~-------------~ 376 (431)
T PRK15481 312 QWVSHLLQDLVYACLTDPEY-QARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT-------------D 376 (431)
T ss_pred cCCCHHHHHHHHHHHhCccH-HHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC-------------C
Confidence 67899999999999987432 5789999999999999999999987 8888789999999999974 4
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA-SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~-~~e~i~~~~~~l~~~l~ 463 (471)
..++++.|.+ +||.+.||..|+.. +++||+++. +++++++++++|++++.
T Consensus 377 ~~~~~~~l~~-~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 SQATALTLAK-SGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHH-CCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 5788888875 59999999999643 689999998 88999999999998874
No 57
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-52 Score=426.36 Aligned_cols=353 Identities=26% Similarity=0.443 Sum_probs=315.1
Q ss_pred CCeEEcCCCCCCCCC-h-HHHHHHHHHHHHc---C-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 95 VSVIRLAAGEPDFDT-P-VLIAEAGINAIRE---G-FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~-p-~~v~~a~~~~~~~---~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
...++|+.|.|+... | ..+.+++.+.+.. . ...|++..|.++||++|++++....|+.+++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 679999999976644 3 4566666666532 2 46888889999999999999998899999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEE-cCCCCCcccCCC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLIL-CSPSNPTGSVYP 246 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i-~~p~NPtG~~~~ 246 (471)
.++++.+++|||+|++++|+|.....+++..|++++.||++.++ +|+|.|++.+.. ++|++|+ ++-|||||.+||
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G---~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms 245 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG---IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMS 245 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCC---CCHHHHHHHHhhcCCcEEEECCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999998433 999999999865 7898885 677999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~ 326 (471)
.+++++|+++|++| |++||+||+|++|.|++...+++..++. .++||+++||||+++ ||+|+||+++|+++++++..
T Consensus 246 ~~rR~~Ll~lA~~~-~~~IIEDD~y~el~~~~~p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~ 322 (459)
T COG1167 246 LERRKALLALAEKY-DVLIIEDDYYGELRYDGPPPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLR 322 (459)
T ss_pred HHHHHHHHHHHHHc-CCeEEeeCcchhhhcCCCCCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHH
Confidence 99999999999999 9999999999999999776666777765 699999999999996 99999999999999999999
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC-C-CCeeeCCCcceEEeEecCCccCCcc
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-E-GVKMSEPQGAFYLFIDFSTYYGSEA 404 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~-g~~~~~p~~g~~~~~~~~~~~~~~~ 404 (471)
.+.....+++.+.|.++...+.++.+ ..|+++++..|+++++.+.+.|.+. + ++.|..|.||||+|+++|+.+
T Consensus 323 ~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~---- 397 (459)
T COG1167 323 LKQAADLGPSSLSQAALAAFLLSGHY-DRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGI---- 397 (459)
T ss_pred HHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCC----
Confidence 99999999999999999999996544 8999999999999999999999996 3 588999999999999999863
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEEC-CCCCCCC----CcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012095 405 EGFGKIENSESLCRYLLDKAQVALVP-GDAFGDD----TCIRISYAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~gV~v~p-g~~f~~~----~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
++.++.+.++++ ||.+.| |..|... +++|++|+. +++++++++.+|.+++++..
T Consensus 398 -------~~~~l~~~a~~~-gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 398 -------DARELLAAALEK-GVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred -------CHHHHHHHHHHC-CCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 788999988876 888888 8888753 489999999 88999999999999998754
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=5.4e-52 Score=420.97 Aligned_cols=367 Identities=28% Similarity=0.403 Sum_probs=299.1
Q ss_pred cccccCCC-hHHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Q 012095 71 RVNAVKPS-KTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-----FTRYTPNAGTLELRSAIC 142 (471)
Q Consensus 71 ~~~~~~~~-~~~~~~~~~~~~~~--~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ia 142 (471)
.+..++++ .+..+......... .+.++|+|+.|+|++++++.+.+++.+.+.+. ...|+|..|.++||++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia 85 (402)
T TIGR03542 6 HFLKLKSSYLFSEINRRVNEFRKKHPSADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIA 85 (402)
T ss_pred CccccCcchHHHHHHHHHHHHHhccCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHH
Confidence 34455554 34445555554443 36789999999999999999999998887642 356989999999999999
Q ss_pred HHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCC-----------EEEEecCCCC
Q 012095 143 HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA-----------TPVILPTRIS 211 (471)
Q Consensus 143 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~-----------~~~~v~~~~~ 211 (471)
+++.+. + +++++|++|+|+++++..+ ..++.+||+|++++|+|..|...++..|+ +++.++++.+
T Consensus 86 ~~~~~~-~--~~~d~I~it~Ga~~al~~l-~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~ 161 (402)
T TIGR03542 86 ENDYRG-R--IDPEEIFISDGAKCDVFRL-QSLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKE 161 (402)
T ss_pred HHHHhc-C--CCHHHEEECCCcHHHHHHH-HHhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchh
Confidence 986321 2 6889999999999999976 45668999999999999999999999999 9999998766
Q ss_pred CCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 212 ~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
++|.+|++. .+++++|+++|||||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..++...
T Consensus 162 ~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~ 235 (402)
T TIGR03542 162 NNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH-GSLILFDAAYSAFISDPSLPHSIFEIPGAK 235 (402)
T ss_pred hCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CeEEEEEchhhhhccCCCCCcchhhCCCCc
Confidence 666666432 24789999999999999999999999999999999 999999999999987654334455555445
Q ss_pred CceEEEecCCcccCccchhheeeEcCHHHH--------HHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--------AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i--------~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
+++|+++||||.||++|+|+||++++++++ +.+.........+++.++|.++..++... ...++.+.++.
T Consensus 236 ~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~--~~~~~~~~~~~ 313 (402)
T TIGR03542 236 ECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGE--GLQPILEAISY 313 (402)
T ss_pred ccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCc--chhHHHHHHHH
Confidence 789999999999999999999999999887 22222222233358889999988888753 13567778899
Q ss_pred HHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEE
Q 012095 364 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIR 441 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iR 441 (471)
|+++++.+.+.|++. |+++..|.+++|+|++++... ++.+++++|++++||.+.||+.|+. ++|+|
T Consensus 314 ~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~~-----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iR 381 (402)
T TIGR03542 314 YMENARILRKALEAA-GFKVYGGEHAPYLWVKTPEGI-----------SSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVR 381 (402)
T ss_pred HHHHHHHHHHHHHhc-CceecCCCceeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEE
Confidence 999999999999987 788888889999999998642 6778999999878999999999875 47999
Q ss_pred EEeecCHHHHHHHHHHHHHH
Q 012095 442 ISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 442 is~~~~~e~i~~~~~~l~~~ 461 (471)
|+++.+++++++++++|+++
T Consensus 382 is~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 382 FSAFGKRENIVEACERIKEA 401 (402)
T ss_pred EEecCCHHHHHHHHHHHHhh
Confidence 99888889999999999875
No 59
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=8.4e-52 Score=414.51 Aligned_cols=355 Identities=27% Similarity=0.373 Sum_probs=296.6
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
.+++++...... .+...+......+.++|+|+.|+|..+.++.+.+++.+... ..+|++..|.++||+++++++.
T Consensus 2 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~ 76 (364)
T PRK07865 2 PVSARLPDFPWD---TLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAAD--APGYPTTAGTPELREAIVGWLA 76 (364)
T ss_pred CccccCCCccHH---HHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHHHHH
Confidence 455666555544 33333333334667899999999987778888888876543 3589888999999999999999
Q ss_pred HHhCCC-CCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 147 EENGLS-YTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 147 ~~~g~~-~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
+.+|++ +++++|++|+|+++++..++..+ +++||.|++++|+|+.|...++..|++++.++. +++++.
T Consensus 77 ~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---------~~~l~~- 146 (364)
T PRK07865 77 RRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS---------LTELGP- 146 (364)
T ss_pred HHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC---------hhhCCc-
Confidence 999987 89999999999999999888888 799999999999999999999999999988752 233322
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC---CCCCCceEEEecCC
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL---PGMWERTLTVNGFS 301 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~---~~~~~~~i~~~S~S 301 (471)
+++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++.. .+.... ....+++|+++|||
T Consensus 147 --~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~S 222 (364)
T PRK07865 147 --QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER-GAVVASDECYLELGWDAEP-VSILDPRVCGGDHTGLLAVHSLS 222 (364)
T ss_pred --ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhhhccCCCC-CccccccccCCccceEEEEeech
Confidence 5789999999999999999999999999999999 9999999999998876532 222111 12347899999999
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
|.||++|+|+||+++++++++.+.+.+.....+++.+.|.++..+|.+ .+++++.++.|+++++.+.+.|++. |+
T Consensus 223 K~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 297 (364)
T PRK07865 223 KQSNLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGD----DAHVREQRERYARRRAVLRPALEAA-GF 297 (364)
T ss_pred hccCCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 999999999999999999999999887777778899999999998874 6788899999999999999999987 88
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIK 459 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~ 459 (471)
.+..|++|||+|++++. +..++.+.|.+ .||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 298 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~-~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 298 RVDHSEAGLYLWATRGE-------------DCWDTVAWLAE-RGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred cccCCCccEEEEEeCCC-------------CHHHHHHHHHH-CCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 88889999999998742 45677777655 5999999998873 57999999988899999999985
No 60
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-51 Score=388.75 Aligned_cols=355 Identities=29% Similarity=0.503 Sum_probs=323.9
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.+++-|+..+.+|+.|+.+++|+++.++.+..+|+ .+..++-+++++|++++++..+.++.|++++|...++..+++.
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~ 102 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRA 102 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHH
Confidence 57999999999999999999999999999999994 6788999999999999999999999999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
|.+|||.|++..|.|+++....+..|.+++..|+.. ++.|.+|.++|++++.+ ++|++++||||||||.++++++|++
T Consensus 103 ~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~ 182 (388)
T COG1168 103 LTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRK 182 (388)
T ss_pred hCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHH
Confidence 999999999999999999999999999999999984 45688999999998865 5689999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCccchhheeeEcC-HHHHHH-HHHHHh
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAA-CNKIQS 329 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~-l~~~~~ 329 (471)
|.++|++| |+.||+||+|.++++.|+.+.++..+.. -.++.|++.|-||+|+++|+.+++++.+ +++.++ ++++..
T Consensus 183 i~elc~kh-~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~ 261 (388)
T COG1168 183 IAELCLRH-GVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKR 261 (388)
T ss_pred HHHHHHHc-CCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHH
Confidence 99999999 9999999999999999988888877653 2589999999999999999999998764 555444 445565
Q ss_pred cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 330 ~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
....++|.++..|..++.+. .+.|++++++.++.+++++.+.|.+ +|++++..|+|.+.+|+++....
T Consensus 262 ~~~~~~n~lg~~A~~aAY~~---G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~-------- 330 (388)
T COG1168 262 NGLHGPSALGIIATEAAYNQ---GEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELG-------- 330 (388)
T ss_pred hcCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccC--------
Confidence 66778999999999999998 5899999999999999999999998 69999999999999999998752
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCCC--CcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~--~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
.++.++.+.|+++.+|.+.+|..||.. +++|++++++.+.++++++||.++++..
T Consensus 331 --l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 331 --LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred --CChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 266799999999999999999999964 7999999999999999999999998764
No 61
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-53 Score=426.70 Aligned_cols=367 Identities=17% Similarity=0.163 Sum_probs=291.0
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC-CCCChHHHHHHHHHHH----H-cCCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDTPVLIAEAGINAI----R-EGFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~----~-~~~~~Y~~~~G~~~lr~~ia~ 143 (471)
.++....+++++.+.+.+.. ..++++|+|+.|.| ++++|....+++.+++ . ....+|+|..|.++||+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 83 (404)
T PTZ00376 6 SQVPLGPPDPILGLAAAFKA--DPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK 83 (404)
T ss_pred hcCCcCCCChHHHHHHHHhh--cCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence 34555666666665554432 23457899999996 4666544455555543 2 234789999999999999999
Q ss_pred HHHHHhCCCCCCCcEE--EeCChHHHHHHHHH---HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 144 KLKEENGLSYTPDQIL--VSNGAKQSILQAVL---AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~--it~G~~~al~~~~~---~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++.+..+..+++++|+ .|.|+++++..++. ++++|||+|++++|+|+.|...++.+|++++.+|+..+++|++|+
T Consensus 84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~ 163 (404)
T PTZ00376 84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF 163 (404)
T ss_pred HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence 9976666667889998 59999999987764 668999999999999999999999999999999996555688999
Q ss_pred HHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCc
Q 012095 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 293 (471)
+.+++++. ++++++++|+||||||.++|.+++++|+++|++| +++||+||+|.++.|++. ...++..+....++
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 242 (404)
T PTZ00376 164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK-NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVE 242 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCc
Confidence 99999884 3456677899999999999999999999999999 999999999999988541 12233333333468
Q ss_pred eEEEecCCcccCccchhheee---EcCHHHHHHH----HHHHhcccCCCChHHHHHHHHHHhccCCCh---HHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYI---AGPKHFVAAC----NKIQSQFTSGASSISQKAGVAALGLGYAGG---EVVSKMVKA 363 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v---~~~~~~i~~l----~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~---~~~~~~~~~ 363 (471)
+|+++||||.|+++|||+||+ ++++++++.+ .+.......+++.++|.++..+|+++...+ +++++++++
T Consensus 243 vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 243 FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 5788765544 333334445678899999999997632112 336677789
Q ss_pred HHHHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 364 FRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
|+++|+.+.+.|+++. ++.+..|+||||+|++++ .+++++|++++||.+.||.
T Consensus 323 ~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~~~v~v~p~~-------- 378 (404)
T PTZ00376 323 IQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEKYHIYLLDNG-------- 378 (404)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC----------------HHHHHHHHHhCCEeecCCC--------
Confidence 9999999999999862 355668999999998763 4789999999899999982
Q ss_pred EEEee-cCHHHHHHHHHHHHHHHH
Q 012095 441 RISYA-ASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 441 Ris~~-~~~e~i~~~~~~l~~~l~ 463 (471)
|+|++ .+.+++++++++|++++.
T Consensus 379 Ris~~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 RISVAGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred eEEEeccCHHhHHHHHHHHHHHHh
Confidence 99998 488999999999999875
No 62
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2e-52 Score=426.46 Aligned_cols=361 Identities=22% Similarity=0.373 Sum_probs=301.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH------------cCCCCCCCCCCCHHHHHHHHHHHHHHhCC--CCCCCcEEEe
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIR------------EGFTRYTPNAGTLELRSAICHKLKEENGL--SYTPDQILVS 161 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~------------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~--~~~~~~i~it 161 (471)
.+|+|+..++.+- .+.+.+.+.+... .....|++..|.++||+++++++++.+|. ++++++|++|
T Consensus 48 g~i~l~~aeN~l~-~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit 126 (447)
T PLN02607 48 GVIQMGLAENQVS-FDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLT 126 (447)
T ss_pred ceEEEechhhhhh-HHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEc
Confidence 4899999998763 4455555544322 12245888899999999999999988773 5899999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEE
Q 012095 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (471)
Q Consensus 162 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i 234 (471)
+|+++++..++.++++|||.|+++.|+|+.|...+. ..|+++++|+++.+++|.+|++.+++++++ ++|+|++
T Consensus 127 ~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll 206 (447)
T PLN02607 127 AGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLI 206 (447)
T ss_pred CChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEE
Confidence 999999999999999999999999999999998777 479999999998777899999999998864 7889999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC------CCCCceEEEecCCcccCccc
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP------GMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~------~~~~~~i~~~S~SK~~g~~G 308 (471)
+|||||||.++|++++++|+++|++| +++||+||+|..+.|++....++.++. ...+++++++||||.||++|
T Consensus 207 ~nP~NPtG~~~s~e~l~~l~~~~~~~-~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~G 285 (447)
T PLN02607 207 TNPSNPLGATVQRSVLEDILDFVVRK-NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPG 285 (447)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCc
Confidence 99999999999999999999999999 999999999999888765445554321 11478999999999999999
Q ss_pred hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 309 WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 309 ~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
+|+||+++ ++++++.+...... .++++++|.++..+|.+..+.+.++.+.+++++++++.+.+.|++. |+.+.+++
T Consensus 286 lRvG~ivs~n~~l~~~~~~~~~~--~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ 362 (447)
T PLN02607 286 FRVGTIYSYNDKVVTTARRMSSF--TLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGN 362 (447)
T ss_pred ceEEEEEEcCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCC
Confidence 99999998 67788877765432 2468889999999998754334678889999999999999999987 88888999
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
+|+|+|+++++..... ......++.++|++++||.+.||..|+. ++|+||+|+. ++++++++++||.+++++
T Consensus 363 ag~fvw~~L~~~~~~~-----~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 363 AGLFCWMNLSPLLETP-----TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred eeEEEEEEchHhhcCC-----CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 9999999997542100 0013457888898878999999999975 6899999997 899999999999999986
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
.+
T Consensus 438 ~~ 439 (447)
T PLN02607 438 RK 439 (447)
T ss_pred HH
Confidence 54
No 63
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.7e-51 Score=410.97 Aligned_cols=348 Identities=27% Similarity=0.357 Sum_probs=298.3
Q ss_pred CCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-CC
Q 012095 76 KPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS-YT 154 (471)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~-~~ 154 (471)
++.+++.+.+.+.+.++.++++|+|+.|+|.+++++.+.+++.++.. ...|++..|.++||+++++++++.+|++ ++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~ 79 (357)
T TIGR03539 2 PDFPWDSLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLD 79 (357)
T ss_pred CcchHHHHHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC
Confidence 45567777777777777888999999999988888888888877643 4679888999999999999999988987 99
Q ss_pred CCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 155 PDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
+++|++|+|+++++..++..+ +++||.|++++|+|+.|...++..|++++.++ +++.+. .+++++|+
T Consensus 80 ~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~ 147 (357)
T TIGR03539 80 PTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIW 147 (357)
T ss_pred cCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEE
Confidence 999999999999999988888 79999999999999999999999999988774 223332 24789999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc---CCCCCCceEEEecCCcccCccchh
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS---LPGMWERTLTVNGFSKAFAMTGWR 310 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~~~~i~~~S~SK~~g~~G~R 310 (471)
+++|+||||.++|.+++++|+++|++| |++||+||+|.++.|++.. ..... .+...+++|+++||||.|+++|+|
T Consensus 148 ~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R 225 (357)
T TIGR03539 148 LNSPGNPTGRVLSVDELRAIVAWARER-GAVVASDECYLELGWEGRP-VSILDPRVCGGDHTGLLAVHSLSKRSNLAGYR 225 (357)
T ss_pred EeCCCCCcCccCCHHHHHHHHHHHHHc-CeEEEEecchhhhccCCCC-ccceecccCCCccccEEEEeccccccCCCcee
Confidence 999999999999999999999999999 9999999999998876532 12111 122346899999999999999999
Q ss_pred heeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcce
Q 012095 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAF 390 (471)
Q Consensus 311 ~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~ 390 (471)
+||+++++++++.+.+.+.....+++.+.|.++.++|.+ ..+++..++.|+++++++.+.|.+. |+.+.+|++||
T Consensus 226 ~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~p~~~~ 300 (357)
T TIGR03539 226 AGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD----DGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGL 300 (357)
T ss_pred EEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHHHHHHHc-CCCCcCCCccE
Confidence 999999999999998887766778999999999998864 6778889999999999999999987 88888899999
Q ss_pred EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHH
Q 012095 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l 458 (471)
|+|++++. +..++.+.|. ++||.+.||..|+. ++++||+++.+++++++++++|
T Consensus 301 ~~~~~~~~-------------~~~~~~~~l~-~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 301 YLWATRGE-------------DAWDTVDRLA-ELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred EEEEECCC-------------CHHHHHHHHH-hCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 99998753 4567888765 45999999998874 4799999999889999999886
No 64
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=8.2e-52 Score=418.97 Aligned_cols=364 Identities=16% Similarity=0.179 Sum_probs=289.6
Q ss_pred cccccCCChHHHHHHHHHHHHhcCCCeEEcCCCC---CCCCCh--HHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHH
Q 012095 71 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDFDTP--VLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHK 144 (471)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~---~~~~~p--~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~ 144 (471)
++...+++.+..+...+... ..+++|+|+.|. |++.+| +.+.+++.+++.+ ...+|++..|.++||++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 4 HLEAAPADPILGLMEAFRAD--PRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cCCCCCCChHHHHHHHHhhC--CCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 45566666666554444322 124689999996 444445 6788888887654 345799999999999999999
Q ss_pred HHHHhCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHH
Q 012095 145 LKEENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 220 (471)
Q Consensus 145 ~~~~~g~~~~~~~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~ 220 (471)
+.+..+..+++++| ++|+|+++++..+++++ ++|||+|++++|+|+.|..+++..|++++.+|+..+++|++|++.
T Consensus 82 ~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 161 (396)
T PRK09257 82 LFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDA 161 (396)
T ss_pred hcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHH
Confidence 98766655688887 99999999999998766 589999999999999999999999999999998434458899999
Q ss_pred HHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC-CCccccccCCCCCCceEE
Q 012095 221 LESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTLT 296 (471)
Q Consensus 221 l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~ 296 (471)
++++++. +++++++++||||||.++|.+++++|+++|++| +++||+||+|.++.++. ....++..+....+++|+
T Consensus 162 l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~ 240 (396)
T PRK09257 162 MLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKER-GLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccchHHHHHHHHHHHhcCCcEEE
Confidence 9998752 345555699999999999999999999999999 99999999999988752 223444444444578999
Q ss_pred EecCCcccCccchhheeeEc---CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCC---ChHHHHHHHHHHHH
Q 012095 297 VNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFRE 366 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~---~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---~~~~~~~~~~~~~~ 366 (471)
++||||.|+++|||+||+++ +++ +++.+.........+++.+.|.++..+|.++.. ..++++++++.|++
T Consensus 241 i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 320 (396)
T PRK09257 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKA 320 (396)
T ss_pred EEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999973 444 344444444444556789999999999976321 14678889999999
Q ss_pred HHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEE
Q 012095 367 RRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 443 (471)
Q Consensus 367 ~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis 443 (471)
+|+.+.+.|+++. ++.+..|+||||+|++++ .+++.+|++++||.+.|. + ||+
T Consensus 321 rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~----------------~~~~~~l~~~~~V~~~p~------~--ri~ 376 (396)
T PRK09257 321 MRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLT----------------PEQVDRLREEFGVYAVGS------G--RIN 376 (396)
T ss_pred HHHHHHHHHHhcCCCCCcccccccceEEEecCCC----------------HHHHHHHHHcCCEEEcCC------C--eEE
Confidence 9999999999862 377888999999999874 246677888889999883 2 999
Q ss_pred eec-CHHHHHHHHHHHHHH
Q 012095 444 YAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 444 ~~~-~~e~i~~~~~~l~~~ 461 (471)
|++ ++++|++++++|+++
T Consensus 377 ~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 377 VAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred EeeCCHHHHHHHHHHHHhh
Confidence 986 999999999999875
No 65
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.3e-51 Score=419.02 Aligned_cols=358 Identities=23% Similarity=0.336 Sum_probs=281.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH-HHHHHHhCCCCCC-C--cEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC-HKLKEENGLSYTP-D--QILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia-~~~~~~~g~~~~~-~--~i~it~G~~~al~~~ 171 (471)
++|+|+.|+|++++++.+ .++.+++. +. +|+++.|..+++++++ +++.+.++....+ + +|++|+|+++++..+
T Consensus 95 ~~i~l~~g~p~~~~~~~~-~~~~~~~~-~~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFL-YEMCDGII-GD-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred HHHhhcCCCCCCCCCHHH-HHHHHHhh-cC-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 479999999999976555 55555543 22 6877788888888887 5666655433333 3 899999999999998
Q ss_pred HHH-----hcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCC-----CcCCHHHHHhhhccCCcEEEEcCCCC
Q 012095 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISEN-----FLLDPKVLESKLTEKSRLLILCSPSN 239 (471)
Q Consensus 172 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~-----~~ld~e~l~~~l~~~~~~i~i~~p~N 239 (471)
+.+ +++|||+|++++|+|+.|...++.. |++++.++.+.+++ |.+|++++++++++++|+|+|+||||
T Consensus 172 ~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~N 251 (521)
T TIGR03801 172 FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSN 251 (521)
T ss_pred HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCC
Confidence 887 7899999999999999999998876 67888888765443 99999999999888999999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhC-CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 240 PTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 240 PtG~~~~~~~l~~i~~l~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
|||.+++.+++++|+++|++| ++++||+||+|.+|.+. ..++... ..+++|+++||||.||++|||+||+++++
T Consensus 252 PTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~--~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 252 PPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE--LPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh--CCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 999999999999999999974 48999999999998752 2344333 24689999999999999999999999976
Q ss_pred H-----HHHH--------H------------------------HHHHhcccCCCChHHHH-----HHHHHHhccCCChHH
Q 012095 319 H-----FVAA--------C------------------------NKIQSQFTSGASSISQK-----AGVAALGLGYAGGEV 356 (471)
Q Consensus 319 ~-----~i~~--------l------------------------~~~~~~~~~~~~~~~q~-----aa~~~L~~~~~~~~~ 356 (471)
+ +++. + +++....+.|++++.|. ++.++++. .+.+
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~---~~~y 403 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK---ENAY 403 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc---chhH
Confidence 4 2221 1 34555667778888887 34445553 4678
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCC-cccCCC----CCCCHHHHHHHHHHcCCEEEECC
Q 012095 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFG----KIENSESLCRYLLDKAQVALVPG 431 (471)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~-~~~~~~----~~~~~~~l~~~Ll~~~gV~v~pg 431 (471)
.+++++.+++|++.+.+.| .+ .+...+|+|+||+|++++..... ....+. ...++.+|+.+|++++||.+.||
T Consensus 404 ~~~~~~~~~~R~~~l~~~L-g~-~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG 481 (521)
T TIGR03801 404 KAETKDICRRREKLLFRGL-GL-PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPG 481 (521)
T ss_pred HHHHHHHHHHHHHHHHHhc-CC-CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCc
Confidence 9999999999999999998 22 23345789999999999852100 000000 00157899999999999999999
Q ss_pred CCCCCC-CcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012095 432 DAFGDD-TCIRISYAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 432 ~~f~~~-~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
..|+.+ +++|+|++. +++++.++.++|+++++++.
T Consensus 482 ~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~ 518 (521)
T TIGR03801 482 GGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYY 518 (521)
T ss_pred hhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 999864 689999996 88999999999999998754
No 66
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6e-50 Score=404.93 Aligned_cols=346 Identities=30% Similarity=0.490 Sum_probs=297.8
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
+.++++|+.|.|++++|+.+.+++.+.+... ..+|++..|.+++|+.+++++.+.++..+++++|++|+|+++++..
T Consensus 32 ~~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~ 111 (394)
T PRK06836 32 ADNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV 111 (394)
T ss_pred CCCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH
Confidence 3568999999999888889999998877642 5779899999999999999999988888899999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHH
Q 012095 171 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (471)
Q Consensus 171 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l 250 (471)
++..++++||.|++++|+|..|...++..|++++.++++++ +|++|+++++++++++++++++++||||||.++|.+++
T Consensus 112 ~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~ 190 (394)
T PRK06836 112 ALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETL 190 (394)
T ss_pred HHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHH
Confidence 99999999999999999999999999999999999998754 47899999999998899999999999999999999999
Q ss_pred HHHHHHHHh------CCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH-
Q 012095 251 DEIARIVAK------HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA- 323 (471)
Q Consensus 251 ~~i~~l~~~------~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~- 323 (471)
++|+++|++ | +++||+||+|.++.+++...+++.. ..+++++++||||.||++|+|+||+++++++.+.
T Consensus 191 ~~l~~la~~~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~---~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~ 266 (394)
T PRK06836 191 KALAALLEEKSKEYGR-PIYLISDEPYREIVYDGAEVPYIFK---YYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDAD 266 (394)
T ss_pred HHHHHHHHHhhhccCC-CeEEEEeccccccccCCCCCCChHH---ccCcEEEEecchhhccCcceeeEEEecCHHHhhhH
Confidence 999999999 8 9999999999999886543333322 2478999999999999999999999999876432
Q ss_pred -----HHHHHhcc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecC
Q 012095 324 -----CNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 324 -----l~~~~~~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~ 397 (471)
+....... ..+++.+.|.++...+.+ . ..+..|+++++.+.+.|+++ |+.+..|++|||+|+++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~----~----~~~~~~~~~r~~l~~~L~~~-g~~~~~~~gg~~~~~~~~ 337 (394)
T PRK06836 267 DLVAALVFANRILGFVNAPALMQRVVAKCLDA----T----VDVSIYKRNRDLLYDGLTEL-GFECVKPQGAFYLFPKSP 337 (394)
T ss_pred HHHHHHHHHhhccccccCCHHHHHHHHHHhCC----h----HHHHHHHHHHHHHHHHHHhC-CCEeecCCceEEEEEeCC
Confidence 11112211 235788899999888864 1 12567888999999999988 899899999999999987
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.. +..++++.|. ++||.+.||..|+.++++||+++.+++++++++++|+++++++.
T Consensus 338 ~~------------~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 338 EE------------DDVAFCEKAK-KHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred CC------------CHHHHHHHHH-hCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 52 6778887765 45999999999988899999999999999999999999998764
No 67
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-50 Score=403.51 Aligned_cols=337 Identities=24% Similarity=0.388 Sum_probs=285.9
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
+.+......+.++|+|+.|++++++|+.+.+++.+.+.. ..+| |..|..+||+++++++ + +++++|++|+|+
T Consensus 20 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y-~~~~~~~lr~~ia~~~----~--~~~~~I~it~G~ 91 (357)
T PRK14809 20 EVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAER-VHSY-PKASHADLTAALADRW----D--VSPEQVWLANGG 91 (357)
T ss_pred HHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhh-hhcC-CCCCHHHHHHHHHHHh----C--CCcceEEECCCH
Confidence 344444445678999999999999998999998887653 5678 5678999999999987 3 688999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~ 244 (471)
++++..+++++++|||.|++++|+|..|...++..|++++.++++.+++|.++++.+++.. +++|+|+++|||||||.+
T Consensus 92 ~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~ 170 (357)
T PRK14809 92 DGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSE 170 (357)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcC
Confidence 9999999999999999999999999999988999999999999976667888999888765 468999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l 324 (471)
+|.+++++|+++|++ +++||+||+|.++.+.+. ....+ ...+++++++||||.||++|+|+||+++++++++.+
T Consensus 171 ~s~~~~~~l~~~~~~--~~~iI~De~y~~~~~~~~---~~~~~-~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 244 (357)
T PRK14809 171 IPLDEVEALAERTDE--ETLVVVDEAYGEFAERPS---AVALV-EERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAY 244 (357)
T ss_pred CCHHHHHHHHHhCcc--CcEEEEechhhhccCCch---hHHHH-hhCCCEEEEecchhHhcCcchhheeeecCHHHHHHH
Confidence 999999999999864 578999999999876431 11112 235789999999999999999999999999999999
Q ss_pred HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcc
Q 012095 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 404 (471)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~ 404 (471)
.+... ..+++.++|.++..+|.+ .+|+++.++.++++++.+.+.|... ++ |.+|+|+|++++
T Consensus 245 ~~~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~~----~~~g~f~~~~~~------- 306 (357)
T PRK14809 245 ARVNT--PFAASELACRAGLAALDD----DEHVERTVETARWAREYIREELDAP-TW----ESAGNFVLAEVG------- 306 (357)
T ss_pred HHhCC--CCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHhcCc-cC----CCCCCEEEEECC-------
Confidence 88654 456889999999999874 7889999999999999999998753 22 567888999874
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 405 EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++++.|.+ +||.+.||+.|+.+++|||+++. .+++++++++|+++++
T Consensus 307 -------~~~~~~~~l~~-~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -------DASAVAEAAQE-RGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -------CHHHHHHHHHH-CCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 46788888754 59999999999888999999875 6899999999998875
No 68
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=2.8e-50 Score=434.11 Aligned_cols=363 Identities=19% Similarity=0.248 Sum_probs=296.9
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~ 171 (471)
+|+++|+|+.|+|++++|+.+++++.+++... .| ..|.+++++++++++++.+|+++++ ++|++|+|+++++..+
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~--~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~ll 770 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQ--NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKL 770 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhc--CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHH
Confidence 46789999999999999999999999877542 22 3467889999999999999988765 5999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCC-CCcccCCCHHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPS-NPTGSVYPKNL 249 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~-NPtG~~~~~~~ 249 (471)
++++++|||.|+++.|+|+.|...++..|++++.+|++.+++|.+|++.+++++++ +.++|+++||| ||||.+++.++
T Consensus 771 l~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~ee 850 (1082)
T PLN02672 771 VLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSE 850 (1082)
T ss_pred HHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHH
Confidence 99999999999999999999999999999999999998777899999999999876 45689999997 99999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCc--cccc----cCCCC--CCceEEEecCCcccCccchhheeeEcCH-HH
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFA----SLPGM--WERTLTVNGFSKAFAMTGWRLGYIAGPK-HF 320 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~--~~~~----~~~~~--~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~ 320 (471)
+++|+++|++| +++||+||+|.++.|++... .++. .+... ..++++++||||.++++|||+||+++++ ++
T Consensus 851 Le~Llela~k~-di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eL 929 (1082)
T PLN02672 851 IEEILSVCAKY-GARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVL 929 (1082)
T ss_pred HHHHHHHHHHc-CCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHH
Confidence 99999999999 99999999999999875321 1111 11111 2479999999999999999999999965 58
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHh----ccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEec
Q 012095 321 VAACNKIQSQFTSGASSISQKAGVAALG----LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (471)
Q Consensus 321 i~~l~~~~~~~~~~~~~~~q~aa~~~L~----~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~ 396 (471)
++.+.+..... ++....|.++.+++. ......+++.+.++.++++|+++.+.|++. |+.+.+|+||||+|+++
T Consensus 930 i~~l~~~~~~s--~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~~PeGGFfLwl~l 1006 (1082)
T PLN02672 930 IDAFHSAPGLS--RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVLEPQGGISMVAKP 1006 (1082)
T ss_pred HHHHHHhhhhc--CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEecCCcEEEEEEEc
Confidence 99888764322 234445555554442 111113567888889999999999999998 89999999999999987
Q ss_pred CCccCCc--ccCC----CCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 397 STYYGSE--AEGF----GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 397 ~~~~~~~--~~~~----~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+...+.. .... ....++.+++++|++++||.+.||..|+.++|+||+++.+++++++++++|+++++
T Consensus 1007 ~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1007 SAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred cccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 5332100 0000 00126789999999988999999999998999999999998999999999998764
No 69
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.3e-50 Score=412.20 Aligned_cols=365 Identities=16% Similarity=0.185 Sum_probs=279.3
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCC-CCCCChHH----HHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE-PDFDTPVL----IAEAGINAIREG-FTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~-~~~~~p~~----v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~ 143 (471)
.++...+...+..+.+.++. ..+...|+|+.|. |+...++. +.++....+..+ ..+|++..|.++||+++++
T Consensus 25 ~~~~~~~~~~i~~~~~~~~~--~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~ 102 (423)
T PLN02397 25 EHVEPAPPDPILGVTEAFLA--DPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAK 102 (423)
T ss_pred HcCCcCCCChHHHHHHHHhh--CCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHH
Confidence 44556666666665554432 2455689999996 66655443 444443333333 3479999999999999999
Q ss_pred HHHHHhCCCCCCCcE-----EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 144 KLKEENGLSYTPDQI-----LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i-----~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++.+.++..+.+++| +.++|+.+ +...+..++.|||+|++++|+|+.|...++..|++++.+|+..+++|++|+
T Consensus 103 ~~~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 103 LAYGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HHcCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 996554433333443 33444443 444445556799999999999999999999999999999985444588999
Q ss_pred HHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCc
Q 012095 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 293 (471)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.+|.|++. ...++..+....++
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~-~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~ 260 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK-NHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHE 260 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEecccCCccCCchhhhhHHHHHHHhcCCc
Confidence 98888774 4677888899999999999999999999999999 999999999999998641 22333333333467
Q ss_pred eEEEecCCcccCccchhheeeE---cCHHHHH----HHHHHHhcccCCCChHHHHHHHHHHhccCCChHH---HHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIA---GPKHFVA----ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKA 363 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~---~~~~~i~----~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~---~~~~~~~ 363 (471)
+|+++||||.|+|+|||+||++ .++++++ .+.+.......+++.+.|.++..+|..+.+.+.| ++++++.
T Consensus 261 vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~ 340 (423)
T PLN02397 261 ILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADR 340 (423)
T ss_pred EEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999984 3666544 4445555556678899999999989753211234 7788999
Q ss_pred HHHHHHHHHHHhcCCCC----CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012095 364 FRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 439 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g----~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~ 439 (471)
|+++|+.+.+.|+++ | +.+..|+||||+|++++ .+++++|++++||++.++.
T Consensus 341 ~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v~~~~------- 396 (423)
T PLN02397 341 IISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYMTRDG------- 396 (423)
T ss_pred HHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEECCCC-------
Confidence 999999999999988 5 78788999999999763 3599999999999997532
Q ss_pred EEEEeec-CHHHHHHHHHHHHHHHH
Q 012095 440 IRISYAA-SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 440 iRis~~~-~~e~i~~~~~~l~~~l~ 463 (471)
|++++. +.+++++++++|++++.
T Consensus 397 -Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 397 -RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred -eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 999985 99999999999999985
No 70
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-50 Score=403.55 Aligned_cols=336 Identities=24% Similarity=0.362 Sum_probs=282.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHHHh--CCCCCCCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEEN--GLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~--g~~~~~~~i~it~G~~~al~~~ 171 (471)
.+++|+.|+|++++|+.+.+++.+++..+ ..+| |..|..+||++|++++++.+ |+.+++++|++|+|+++++..+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~ 107 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSL 107 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHH
Confidence 48999999999999999999999887664 3568 56899999999999998776 5678999999999999999988
Q ss_pred HHHhcCCCC-eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCcccCCC
Q 012095 172 VLAVCSPGD-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 172 ~~~l~~~gd-~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~~~~ 246 (471)
+.+++.+|| .|++++|+|..|...++..|++++.++++. ++|++|+++++++++ +++|+|++++||||||.+++
T Consensus 108 ~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s 186 (374)
T PRK02610 108 LIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLT 186 (374)
T ss_pred HHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCC
Confidence 888888886 899999999999999999999999999863 458899999999886 47999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~ 326 (471)
.+++++|+++| + +++||+||+|.+|.+.. .+..+.. .+++|+++||||.||++|+|+||+++++++++.+.+
T Consensus 187 ~~~l~~l~~~~--~-~~~iI~De~Y~~~~~~~----~~~~~~~-~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~ 258 (374)
T PRK02610 187 AAELEWLRSLP--E-DILVVIDEAYFEFSQTT----LVGELAQ-HPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEK 258 (374)
T ss_pred HHHHHHHHhcc--C-CcEEEEeccccccCccc----hHHHHhc-CCCEEEEEecchhccCcccceeeeecCHHHHHHHHH
Confidence 99999999876 5 89999999999875421 1222222 467899999999999999999999999999999988
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccC
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~ 406 (471)
.+.. ++.+.+.|.++..+|.+ .+.+.+.++..+++ |+.+.+.|++++|+.+ .|++|+|+|++++...
T Consensus 259 ~~~~--~~~~~~~q~a~~~~l~~---~~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~-~p~~g~f~~~~l~~~~------ 325 (374)
T PRK02610 259 VRLP--YNLPSFSQLAAQLALEH---RQELLAAIPEILQE-RDRLYQALQELPQLRV-WPSAANFLYLRLSQDA------ 325 (374)
T ss_pred hcCC--CCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHH-HHHHHHHHHhCCCcEe-CCCcceEEEEeCCCCC------
Confidence 7643 45789999999998875 35666666666554 7778899988878875 4788999999997532
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
++.++++.|.+ +||.+.++ ++++||+++.+ +++++++++|+++++.+.
T Consensus 326 -----~~~~~~~~l~~-~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~~ 373 (374)
T PRK02610 326 -----ALAALHQALKA-QGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQLE 373 (374)
T ss_pred -----CHHHHHHHHHH-CCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhcC
Confidence 67888888755 59999864 46899999875 568999999999987654
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.3e-50 Score=403.06 Aligned_cols=333 Identities=21% Similarity=0.338 Sum_probs=284.2
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.+.++|+|+.|+|++++|+.+++++.+.+.+ ...| |..|..+||+++++++ | +++++|++|+|+++++..++
T Consensus 27 ~~~~~i~l~~nen~~~~~~~v~~a~~~~~~~-~~~Y-p~~g~~~Lr~aia~~~----~--~~~~~I~vt~Gs~e~i~~~~ 98 (366)
T PRK01533 27 GDHSFVKLASNENPFGCSPRVLDELQKSWLD-HALY-PDGGATTLRQTIANKL----H--VKMEQVLCGSGLDEVIQIIS 98 (366)
T ss_pred CCCceEEeCCCCCCCCCCHHHHHHHHHHHHh-cCcC-CCCCHHHHHHHHHHHh----C--CCcceEEECCCHHHHHHHHH
Confidence 3457999999999999999999999887654 3446 7889999999999997 3 58899999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++++++||.|++++|+|+.|...++..|++++.++++ ++.+|+++++++++++++++++|+||||||.+++.+++++
T Consensus 99 ~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~ 175 (366)
T PRK01533 99 RAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQ 175 (366)
T ss_pred HHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999984 3459999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|+++|+++ ++ +|+||+|.++.+.+. ..+........+++|+++||||.||++|+|+||+++++++++.+.+... .
T Consensus 176 l~~~~~~~-~~-~iiDe~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~--~ 250 (366)
T PRK01533 176 FIEGISEN-TL-IVIDEAYYEYVTAKD-FPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL--P 250 (366)
T ss_pred HHHhCCCC-CE-EEEEccHHHhhcccc-CcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC--C
Confidence 99999887 65 666999998876532 1222222223579999999999999999999999999999999988764 4
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
++++.++|.++.++|.+ .+|.++.++.++++++++.+.++.+ |+++.+|+++ |+|++++ +
T Consensus 251 ~~~~~~~q~aa~~~l~~----~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~~~~n-f~~~~~~--------------~ 310 (366)
T PRK01533 251 FNVSSLAQKAATIAFGD----DEFIEEIVRVNTEGLRQYESFCKEN-EIPFYQSQTN-FIFLPVE--------------N 310 (366)
T ss_pred CCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCccCCCcCc-EEEEeCC--------------C
Confidence 57999999999999974 7888888999999999999999887 8888877655 6898885 3
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCCC
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
..++.+.|++ +||.|++ | ++++||+++.. ++.+++++.|+++++..+.+
T Consensus 311 ~~~~~~~l~~-~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~~~ 359 (366)
T PRK01533 311 GGEIYEACAH-AGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKKRK 359 (366)
T ss_pred HHHHHHHHHH-CCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhcccc
Confidence 5678888876 4999998 4 57999998876 67889999999888765543
No 72
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.4e-50 Score=406.78 Aligned_cols=353 Identities=18% Similarity=0.316 Sum_probs=284.1
Q ss_pred CCeEEcCCCCCCCCC-h-HHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDT-P-VLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~-p-~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
+++|+|+.|+|+..+ | +.+.+++.+.+... ..+|++..|.++||++|++++++.+|+++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 568999999987544 3 45667777666432 2579999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC-----CCCeEEE-cCCCCCChHHHHHHcCC----EEEEecCCCCC-CCcCCHHHHHhhhccCCcEEEEcC
Q 012095 168 ILQAVLAVCS-----PGDEVII-PAPFWVSYPEMARIADA----TPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 168 l~~~~~~l~~-----~gd~Vlv-~~p~y~~~~~~~~~~G~----~~~~v~~~~~~-~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
+..++.++++ +||.|++ ++|+|+.|...+...|. .+..+++..++ +|.+|++.++ +.+++++++++|
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~ 187 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSR 187 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEec
Confidence 9999999985 6899999 79999999986654432 22233433221 4779999997 456789999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-CCCCCceEEEecCCcccCccchhheeeE
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
||||||.+++.+++++|+++|++| +++||+||+|..+... ..+... +...+++|+++||||. +++|+|+||++
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~----~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i 261 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQH-NIPLLIDNAYGPPFPG----IIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVI 261 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHc-CCcEEEeCCccccCCC----cchhhcCccccCCeEEEeccccc-CCCcceEEEEe
Confidence 999999999999999999999999 9999999999754211 111111 1124789999999996 89999999999
Q ss_pred cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH-HHHHHHHHHHHHHHHhcCC-C--CCeeeCCCcceE
Q 012095 316 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGEL-E--GVKMSEPQGAFY 391 (471)
Q Consensus 316 ~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~~-~--g~~~~~p~~g~~ 391 (471)
+++++++.+.........+++.+.|.++..+|.++.+ ..++.+ ++..|+++++.+.+.|.+. + ++.+..|+||+|
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~f 340 (416)
T PRK09440 262 ADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL-LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIF 340 (416)
T ss_pred CCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceE
Confidence 9999999999888877778999999999999987432 344444 6888999999998888763 3 356678999999
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---------CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---------~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+|++++... .++.++.+.|. ++||.+.||+.|+. .+++||+++.+++++++++++|.+++
T Consensus 341 iw~~~~~~~----------~~~~~~~~~l~-~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~~~ 409 (416)
T PRK09440 341 LWLWFKDLP----------ITTEELYQRLK-ARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred EEEECCCCC----------CCHHHHHHHHH-HCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHHHH
Confidence 999998520 15678888765 46999999998853 25899999888899999999999999
Q ss_pred HhhCC
Q 012095 463 LTLRP 467 (471)
Q Consensus 463 ~~~~~ 467 (471)
++...
T Consensus 410 ~~~~~ 414 (416)
T PRK09440 410 EKAYA 414 (416)
T ss_pred HHHhh
Confidence 87654
No 73
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=6.3e-51 Score=408.33 Aligned_cols=346 Identities=32% Similarity=0.541 Sum_probs=302.0
Q ss_pred CeEEcCCCCCCCC----ChHHHHHHHHH--HHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHH
Q 012095 96 SVIRLAAGEPDFD----TPVLIAEAGIN--AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSI 168 (471)
Q Consensus 96 ~~i~l~~g~~~~~----~p~~v~~a~~~--~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al 168 (471)
++|+|+.|+++.. +++.+.+++.+ ........|++..|.++||+++++++.+..|++++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5899999998887 45666666665 3334578999999999999999999998899989999 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCc
Q 012095 169 LQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT 241 (471)
Q Consensus 169 ~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPt 241 (471)
..++..+ .++||.|++++|+|+.|...++..|++++.++++.+++|.+|+++|++.+++ +++++++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 8899999999999999999999999999999988778899999999999977 57899999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc-cccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
|.+++.+++++|+++|++| +++||+||+|.++.++.....+ ...+.. ..++++++||||.||++|+|+||+++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~ 239 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREY-NIIIIVDEAYSDLIFGDPDFGPIRSLLDE-DDNVIVVGSLSKSFGLPGLRVGYIVAPPEL 239 (363)
T ss_dssp TBB--HHHHHHHHHHHHHT-TSEEEEEETTTTGBSSSSHTHHHHGHHTT-TSTEEEEEESTTTTTSGGGTEEEEEEEHHH
T ss_pred ccccccccccchhhhhccc-ccceeeeeceeccccCCCccCcccccccc-cccceeeeeccccccccccccccccchhhh
Confidence 9999999999999999999 9999999999999887543222 222332 456999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc
Q 012095 321 VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 321 i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~ 400 (471)
++.+.+....+.. +.+.|.++..++.+.....++++++++.++++++++.+.|++. |+.+.++.+|+|+|+.++..
T Consensus 240 ~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~- 315 (363)
T PF00155_consen 240 IERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPEAGFFLWVRLDPN- 315 (363)
T ss_dssp HHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHSBSSEEEEEESHH-
T ss_pred hhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeeccCccEEEEEcccc-
Confidence 9999998876654 8888988888888632112389999999999999999999988 99999999999999998743
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee-cCHHHHHHHHHHH
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-ASLTTLQAAVERI 458 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~-~~~e~i~~~~~~l 458 (471)
++.+++++|++++||.+.||..|+.++++|++++ .+++++++++++|
T Consensus 316 -----------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 316 -----------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp -----------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred -----------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 5689999999888999999999999999999994 4999999999986
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2e-49 Score=395.32 Aligned_cols=332 Identities=21% Similarity=0.387 Sum_probs=282.4
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++++|+.|+|+.++|+.+.+++.+.+.. ..+| |..+..+||+++++++ + +++++|++|+|+++++..++++
T Consensus 19 ~~~~~l~~~~~~~~~p~~~~~a~~~~~~~-~~~Y-~~~~~~~lr~~ia~~~----~--~~~~~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 19 NMILDFSANINPLGVPESLKQAITENLDK-LVEY-PDPDYLELRKRIASFE----Q--LDLENVILGNGATELIFNIVKV 90 (354)
T ss_pred cceEEecCCCCCCCCCHHHHHHHHHHHHh-hhcC-CCccHHHHHHHHHHHh----C--CChhhEEECCCHHHHHHHHHHH
Confidence 35799999999988899999999987653 5678 5567899999999997 3 6899999999999999999888
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+ .+ +.|++++|+|+.|...++..|++++.++++.+++|.+| +++.+.+.++++++++++||||||.+++.+++++|+
T Consensus 91 ~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~ 167 (354)
T PRK06358 91 T-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKIL 167 (354)
T ss_pred h-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHH
Confidence 6 44 68999999999999999999999999999877778899 666666777899999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhcccC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS 333 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~~ 333 (471)
++|++| +++||+||+|.++.+++.....+..++ ..+++|+++||||.||++|+|+||++++ +++++.+.+... .+
T Consensus 168 ~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~--~~ 243 (354)
T PRK06358 168 DKCEKR-NIYLIIDEAFMDFLEENETISMINYLE-NFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMRE--PW 243 (354)
T ss_pred HHHHhc-CCEEEEeCcccccCCCccchhHHHhcc-CCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCC--CC
Confidence 999999 999999999999988764322222333 3579999999999999999999999985 788898888765 35
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+.+.++|.++..+|++ ..++++.++.++++++.+.+.|++++|+.+.+|+|+ |+|++++ +.
T Consensus 244 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~-f~~~~~~--------------~~ 304 (354)
T PRK06358 244 SINTFADLAGQTLLDD----KEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVN-FIFFKLE--------------KP 304 (354)
T ss_pred cchHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcce-EEEEEcC--------------ch
Confidence 6899999999999964 678899999999999999999999888888888766 6899886 34
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.++++.|+++ ||.+.||+.|+. ++|+||+++.+ ++.+++++.|++++
T Consensus 305 ~~~~~~l~~~-gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 IDLRKELLKK-GILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 6899988875 999999999953 47999998875 56677777777654
No 75
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-49 Score=394.88 Aligned_cols=353 Identities=23% Similarity=0.292 Sum_probs=283.3
Q ss_pred ccccccccCCC-hHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPS-KTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+...+..+.++ +...+...++++...+.++|+|+.|+|++++|+.+.+++.+.. ....| |..+..+||++++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~~lr~~ia~~~~ 100 (380)
T PLN03026 24 IRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESRRLRAALAEDSG 100 (380)
T ss_pred hhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHHHHHHHHHHHhC
Confidence 33444454443 2222333344443345689999999999999888888876531 23457 56688999999999973
Q ss_pred HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh-
Q 012095 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL- 225 (471)
Q Consensus 147 ~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l- 225 (471)
+++++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++++ ++|.+|++++++++
T Consensus 101 ------~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~ 172 (380)
T PLN03026 101 ------LESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVE 172 (380)
T ss_pred ------cChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHh
Confidence 578999999999999999999999999999999999999999999999999999985 45789999999998
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++++|++++||||||.+++.+++++|++. .++||+||+|.+|.+.+. ........+++|+++||||.||
T Consensus 173 ~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~-----~~~vi~DeaY~~~~~~~~----~~~~~~~~~~viv~~SfSK~~g 243 (380)
T PLN03026 173 THKPKLLFLTSPNNPDGSIISDDDLLKILEL-----PILVVLDEAYIEFSTQES----RMKWVKKYDNLIVLRTFSKRAG 243 (380)
T ss_pred ccCCcEEEEeCCCCCCCCCCCHHHHHHHHhc-----CCEEEEECcchhhcCCcc----hHHHHHhCCCEEEEecchHhhc
Confidence 7789999999999999999997777777653 279999999999876432 1111123589999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+.+.+.. ++.+.++|.++.++|.+ .+++++.++.++++|+++.+.|++++++.+ .
T Consensus 244 laGlRiGy~~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~ 316 (380)
T PLN03026 244 LAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALSN----PKYLEDVKNALVEERERLFGLLKEVPFLEP-Y 316 (380)
T ss_pred CccccceeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-C
Confidence 9999999999999999999887754 45889999999999974 678999999999999999999998854554 5
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
|.+++|+|++++.. .++.+++++|++ +||.+.+|..++.++++|||++.+ ++++.+++.|++
T Consensus 317 p~~~~f~~~~~~~~-----------~~~~~~~~~l~~-~gI~v~~~~~~~~~~~lRis~~~~-~~~~~l~~al~~ 378 (380)
T PLN03026 317 PSDANFILCRVTSG-----------RDAKKLKEDLAK-MGVMVRHYNSKELKGYIRVSVGKP-EHTDALMEALKQ 378 (380)
T ss_pred CCCCeEEEEECCCC-----------CCHHHHHHHHHH-CCeEEEECCCCCCCCEEEEecCCH-HHHHHHHHHHHH
Confidence 77888999998742 167889998885 599999987766678999999963 456666666554
No 76
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-49 Score=393.58 Aligned_cols=330 Identities=23% Similarity=0.335 Sum_probs=284.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|+|+.|+|++++++.+.+++.+.+.. ..|.|..|..+||+++++++ + +++++|++|+|+++++..++++
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~~p~~g~~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDE--LALYPDGYAPELRTKVAKHL----G--VDEEQLLFGAGLDEVIQMISRA 100 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHH--hhcCCCCcHHHHHHHHHHHh----C--CCHHHEEECCCHHHHHHHHHHH
Confidence 37899999999998888899999887754 45668889999999999997 3 5789999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
++++||.|++++|+|+.|...+...|++++.+|++ ++.+|++.+++.++++++++++++||||||.+++.+++.+++
T Consensus 101 ~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~ 177 (359)
T PRK03158 101 LLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFL 177 (359)
T ss_pred HhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999986 356899999999888999999999999999999999988888
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
+.|+ + +++||+||+|.++.+++.....+..+ ...+++++++||||.||++|+|+||+++++++++.+.+.... ++
T Consensus 178 ~~~~-~-~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~--~~ 252 (359)
T PRK03158 178 ESVP-S-HVLVVLDEAYYEYVTAEDYPDTLPLL-EKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP--FN 252 (359)
T ss_pred HhCC-C-CcEEEEECchHhhcCCcccccHHHHH-HhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC--CC
Confidence 8774 6 89999999999988764322222222 235789999999999999999999999999999999887653 56
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
++.++|.++.++|.+ .+|+++.++.++++++.+.+.|.+. |+.+.+ .+|+|+|++++. ++.
T Consensus 253 ~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~-~~g~~i~~~~~~-------------~~~ 313 (359)
T PRK03158 253 TTRIAQYAAIAALED----QAFLKECVEKNAEGLEQYYAFCKEY-GLFYYP-SQTNFIFVDTGR-------------DAN 313 (359)
T ss_pred CCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeeCC-CcCcEEEEECCC-------------CHH
Confidence 899999999999974 6788888999999999999999888 887764 456789998852 577
Q ss_pred HHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
++++.|+++ ||.+.||..|+.++++||+++ +.+++++++++|+++
T Consensus 314 ~~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 314 ELFEALLKK-GYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHC-CeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 899998865 999999999988899999988 457888888888775
No 77
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.9e-48 Score=387.55 Aligned_cols=339 Identities=20% Similarity=0.269 Sum_probs=279.6
Q ss_pred HHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 88 TALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 88 ~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.++..++.++|+|+.|+|++++|+.+.+++.+.+.. ...| |..+..+||+++++++ + +++++|++|+|++++
T Consensus 13 ~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~-~~~y-~~~~~~~lr~~ia~~~----~--~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 13 TVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDC-AERY-PDVEYRHLHQALARHH----Q--VPASWILAGNGETES 84 (356)
T ss_pred HHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHh-cccC-cCccHHHHHHHHHHHh----C--cChhhEEECCCHHHH
Confidence 334344667999999999999999999999887654 4568 4567899999999996 3 578999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCH
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~ 247 (471)
+..+++++ .+|| |++++|+|..|...++..|++++.+|++.+++|.+| +++++.+.+++|+|+++|||||||.+++.
T Consensus 85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~ 161 (356)
T PRK08056 85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPER 161 (356)
T ss_pred HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCH
Confidence 99988876 6776 677899999999999999999999999876777777 45556677889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHH
Q 012095 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNK 326 (471)
Q Consensus 248 ~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~ 326 (471)
+++++|+++|++| +++||+||+|.++.+++....+. +. ..+++++++||||.||++|+|+||+++ ++++++.+.+
T Consensus 162 ~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~--~~-~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~ 237 (356)
T PRK08056 162 QLLQAIAERCKSL-NIALILDEAFIDFIPDETGFIPQ--LA-DNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRR 237 (356)
T ss_pred HHHHHHHHHHHhc-CCEEEEecchhccCCcchHHHHH--hc-cCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHH
Confidence 9999999999999 99999999999987754322222 22 246899999999999999999999998 4678888876
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccC
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~ 406 (471)
... ..+++.++|.++..+|.. ..|.++.++.++++|+.+.+.|++++|+.+.++ +++|+|++++.
T Consensus 238 ~~~--~~~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~-------- 302 (356)
T PRK08056 238 QQM--PWSINAFAALAGEVILQD----RAYQQATWQWLAEEGARFYQALCALPLLTVWPG-RANYLFLRCER-------- 302 (356)
T ss_pred hCC--CCchhHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCC-CCcEEEEEcCC--------
Confidence 543 345788899988888863 688889999999999999999998888877655 57889999873
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++++.|++ +||.+.+|..|.. ++||||+++. .++.+.+++.|+++++
T Consensus 303 -----~~~~~~~~l~~-~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 -----PDIDLQRALLT-QRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT 354 (356)
T ss_pred -----ChHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence 45689998886 4999999998843 3699999986 4666777777776653
No 78
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.2e-48 Score=387.02 Aligned_cols=328 Identities=20% Similarity=0.300 Sum_probs=270.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|+|+.|++++++|+.+.+++.+++.. ..+|++ .+..+||++|++++ + +++++|++|+|++++|..++++
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~~Lr~aia~~~----~--v~~~~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA-LRHYPD-PDYRELRLALAQHH----Q--LPPEWILPGNGAAELLTWAGRE 93 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCC-cCHHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHHH
Confidence 36899999999999999999998887764 677965 45689999999997 3 6889999999999999999888
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC---cCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF---LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~---~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+. +||.|++++|+|..|...++..|++++.++++.++++ ..+++.+++.. +++++++++|||||||.+++++
T Consensus 94 l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~--- 168 (360)
T PRK07392 94 LA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSRE--- 168 (360)
T ss_pred hC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHH---
Confidence 65 7899999999999999999999999999999866554 35677776653 4688999999999999999955
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+|.++++++ ++ +|+||+|.++.+++. ..++.......+++|+++||||.||++|+|+||+++++++++.+.+...
T Consensus 169 ~l~~l~~~~-~~-~IiDE~y~~~~~~~~-~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~-- 243 (360)
T PRK07392 169 AILPLLEQF-AL-VVVDEAFMDFLPPDA-EQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD-- 243 (360)
T ss_pred HHHHHHHHC-CE-EEEECchhhhccCcc-ccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC--
Confidence 456667788 76 555999999987653 2333322233578999999999999999999999999999999877653
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
..+++.++|.++.++|++ ..+.+..++.++++|+.+.+.|++++|+.+. |.+++|+|++++.
T Consensus 244 ~~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~------------- 305 (360)
T PRK07392 244 PWPVNGLAAAAAIAALAD----RDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG------------- 305 (360)
T ss_pred CCCCCHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-------------
Confidence 356899999999999974 5778888888999999999999988888875 5778999998863
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCH--HHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASL--TTLQAAVERI 458 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~--e~i~~~~~~l 458 (471)
++.++++.+++++||.+.||..|+. ++||||+++.++ +.+.++++++
T Consensus 306 ~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 5678998888778999999999974 479999999843 4666666654
No 79
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-48 Score=387.27 Aligned_cols=334 Identities=26% Similarity=0.377 Sum_probs=281.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
..|+|+.|+|++++|+.+.+++.+++.. ....| |..|.++||+++++++++.+|+++++++|++|+|+++++..++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~ 105 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLL 105 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHH
Confidence 4699999999999999999999988753 34678 6679999999999999999998899999999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+++++|||.|+++.|+|+.|...++..|.+++.++.+ ++|++|++++++++. +++++|++++||||||.+++.++++
T Consensus 106 ~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~ 183 (368)
T PRK03317 106 QAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVE 183 (368)
T ss_pred HHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999888764 467899999999986 4789999999999999999977777
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+|+++| +++||+||+|.++.+++. .+...+....+++++++||||.||++|+|+||+++++++++.+.....
T Consensus 184 ~l~~~~----~~~lI~DE~y~~~~~~~~--~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~-- 255 (368)
T PRK03317 184 AILDAA----PGIVVVDEAYAEFRRSGT--PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL-- 255 (368)
T ss_pred HHHHHC----CceEEEeCCchhhcccCC--cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC--
Confidence 666555 589999999999876542 222232222468999999999999999999999999999999987653
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
.++.++++|.++.++|+. .+++.+.++.++++++.+.+.|++. |+.+..|+++|++|.+++
T Consensus 256 ~~~~s~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-------------- 316 (368)
T PRK03317 256 PYHLSAVTQAAARAALRH----ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANFVLFGRFA-------------- 316 (368)
T ss_pred CCCCCHHHHHHHHHHhhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcEEEEeccC--------------
Confidence 456889999999999975 3444556677899999999999987 888888999998886653
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+..++.+.|+++ ||.+.++ +.++++||+++. .++++++++.|++++..
T Consensus 317 ~~~~~~~~l~~~-Gv~v~~~---~~~~~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 DRHAVWQGLLDR-GVLIRDV---GIPGWLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred CHHHHHHHHHHC-CEEEEeC---CCCCeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 467888887765 9999874 446899999974 57889999999888753
No 80
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-47 Score=381.61 Aligned_cols=366 Identities=27% Similarity=0.417 Sum_probs=303.1
Q ss_pred ccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 012095 74 AVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLS 152 (471)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 152 (471)
.+++..+..+....... .++.++|+|+.|++.+++++.+.+++.+++..+ ...|++..|..+||+++++++ |
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l----~-- 80 (380)
T PRK06225 8 KVPPSGFKTSNEFFDYV-FKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL----G-- 80 (380)
T ss_pred ccCcchhhhHHHHHHHH-hhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc----C--
Confidence 34444444444433333 234579999999999999999999999988753 467888889999999999986 3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCcCCHHHHHhhhccCCcE
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKLTEKSRL 231 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~ld~e~l~~~l~~~~~~ 231 (471)
+++++|++|+|+++++..++++++.+||+|++++|+|..+...++..|++++.++++. +++|.+|++.+++.+++++++
T Consensus 81 ~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~ 160 (380)
T PRK06225 81 LDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRL 160 (380)
T ss_pred CCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceE
Confidence 4778999999999999999999999999999999999999999999999999999753 346889999999999989999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
+++++|+||||.+++.+++++|+++|++| +++||+||+|.++..+. .....+. .++++++.||||.+|++|+|+
T Consensus 161 v~l~~p~NptG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~---~~~~~~~--~~~~i~~~s~SK~~g~~G~Ri 234 (380)
T PRK06225 161 IYLIDPLNPLGSSYTEEEIKEFAEIARDN-DAFLLHDCTYRDFAREH---TLAAEYA--PEHTVTSYSFSKIFGMAGLRI 234 (380)
T ss_pred EEEeCCCCCCCcCCCHHHHHHHHHHHHHC-CcEEEEehhHHHHhccC---CchhhcC--CCCEEEEeechhhcCCcccee
Confidence 99999999999999999999999999999 99999999998765321 2222222 478999999999999999999
Q ss_pred eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCCCcce
Q 012095 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAF 390 (471)
Q Consensus 312 G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~~g~ 390 (471)
||+++++++++.+..... ...+.+.++|.++..+|.. ...|+++.++.++++++.+.+.|++++|+.+ ..|.+|+
T Consensus 235 G~i~~~~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~ 310 (380)
T PRK06225 235 GAVVATPDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKV---KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGN 310 (380)
T ss_pred EEEecCHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCe
Confidence 999999999999887643 3456889999999888875 3678888888899999999999998767543 2456677
Q ss_pred EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
|+|++++.. + .+..++.+.|.++ ||.+.||..|+. ++++|++++.+++++++++++|++++.+++.
T Consensus 311 ~~~~~~~~~-~---------~~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 311 MMVIDISEA-G---------IDPEDLVEYLLER-KIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred EEEEEcccc-c---------CCHHHHHHHHHHC-CEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 789998642 0 2678899988854 999999987643 4699999999999999999999999988764
No 81
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-48 Score=386.63 Aligned_cols=333 Identities=23% Similarity=0.317 Sum_probs=277.8
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.+.++|+|+.|+|++.+|+.+.+++.+... ...+|++..| .+||+++++++ | +++++|++|+|+++++..++
T Consensus 34 ~~~~~i~l~~~~~~~~~~~~~~~al~~~~~-~~~~Y~~~~g-~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~ 105 (371)
T PRK05166 34 GVPRIAKLGSNENPLGPSPAVRRAFADIAE-LLRLYPDPQG-RALREAIAART----G--VPADRIILGNGSEDLIAVIC 105 (371)
T ss_pred CCcceEEcCCCCCCCCCCHHHHHHHHHHHH-HhhcCCCCcH-HHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 345799999999999888899998887543 3568988788 49999999986 4 47889999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
.+++++||.|++++|+|+.+...++..|++++.++++. ++++|++++++++++++++++++|||||||.+++.+++++
T Consensus 106 ~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~ 183 (371)
T PRK05166 106 RAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLAR 183 (371)
T ss_pred HHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999864 4679999999999888999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCcccccc-CCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 330 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~ 330 (471)
|+++|+ + +++||+||+|.++.+++. .++... +....+++|+++||||.||++|+|+||+++ ++++++.+.+...
T Consensus 184 l~~~~~-~-~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~- 259 (371)
T PRK05166 184 VLDATP-P-ETLIVVDEAYAEYAAGDD-YPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT- 259 (371)
T ss_pred HHHhCC-C-CcEEEEECcHHHhcCCcC-cccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc-
Confidence 999886 4 688999999999886432 233332 222346899999999999999999999775 7889888877654
Q ss_pred ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCC
Q 012095 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 331 ~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
..+++.++|.++.++|.. .+|+++.++.++++|+.+.+.|++. |+.+. |.+|+|+|++++.
T Consensus 260 -~~~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~------------ 320 (371)
T PRK05166 260 -PFNVNGAAQAAALAALDD----EEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR------------ 320 (371)
T ss_pred -CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC------------
Confidence 345899999999988874 6789999999999999999999988 88764 5667889998753
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
++.++++.|+++ ||.+.||..++.+++|||+++.. ++.+++++.|+++
T Consensus 321 -~~~~l~~~l~~~-gi~v~p~~~~~~~~~iRi~~~~~-~~~~~l~~~l~~i 368 (371)
T PRK05166 321 -PASAVAEALLRQ-GVIVKPWKQPGFETFIRVSIGSP-EENDHFVAALDKV 368 (371)
T ss_pred -CHHHHHHHHHHC-CeEEecCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHH
Confidence 567899998876 99999998877789999999973 3344444444433
No 82
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-47 Score=385.19 Aligned_cols=350 Identities=19% Similarity=0.247 Sum_probs=272.5
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCcEEEeCChHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIR----EGFTRYTPNAGTLELRSAICHKLKEENGLSYT---PDQILVSNGAKQSIL 169 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~----~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~---~~~i~it~G~~~al~ 169 (471)
.++.+.|.-.-+..+.+.+++.+++. ....+|++..|.++||+++++++.+..+. +. .++|++|+|+++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~-~~~~~~~~I~it~G~~~al~ 83 (388)
T PRK08637 5 KYNATIGMATEKGGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPS-LSGKKMSLPIVTNALTHGLS 83 (388)
T ss_pred ceecceeeEecCCCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcc-ccccccceeeEccchHHHHH
Confidence 45556665211112233344443333 34678999999999999999999765532 23 268999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCcccC
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~~ 244 (471)
.++.++++|||.|++++|+|+.|...+. ..|++++.+|+..+ ++++|+++++++++ +..++++++|||||||.+
T Consensus 84 ~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 84 LVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred HHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence 9999999999999999999999998764 68999999998422 34689999999876 344456689999999999
Q ss_pred CCHHHHHHHHHHHHh-----CCCeEEEEccCCCccccCCCCcccc-ccCCCCCCce--EEEecCCcccCccchhheeeEc
Q 012095 245 YPKNLLDEIARIVAK-----HPRLLVLSDEIYEHIIYAPATHTSF-ASLPGMWERT--LTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~-----~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~~--i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
++.+++++|+++|++ | +++||+||+|.++.|++....++ ..+....+++ ++++||||.++++|+|+||+++
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~-~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGT-KVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCC-cEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 999999999999875 8 99999999999999876544443 2233334675 4566999999999999999985
Q ss_pred C------HHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC---CCCee
Q 012095 317 P------KHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKM 383 (471)
Q Consensus 317 ~------~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~ 383 (471)
+ +++++.+.+. ......++|.++|.++..+|.++.+ ..++.+.+..++++++.+.+.|++. +++.+
T Consensus 242 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~ 320 (388)
T PRK08637 242 GTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEF-DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQA 320 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccc
Confidence 4 6788877642 1223346899999999999975322 4556777788999999999888764 26888
Q ss_pred eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l 462 (471)
.+|++|||+|++++.. ++.+|+++|++++||.+.++ .++++||+++. +.+++++++++|.+++
T Consensus 321 ~~~~~g~~~~~~l~~~------------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~ 384 (388)
T PRK08637 321 YPFNSGYFMCLKLKGV------------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAI 384 (388)
T ss_pred ccccceEEEEecCChH------------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHH
Confidence 8899999999999742 57889999987779988753 36799999998 8899999999999999
Q ss_pred HhhC
Q 012095 463 LTLR 466 (471)
Q Consensus 463 ~~~~ 466 (471)
+.++
T Consensus 385 ~~~~ 388 (388)
T PRK08637 385 KDLR 388 (388)
T ss_pred HhcC
Confidence 8653
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-47 Score=375.61 Aligned_cols=330 Identities=28% Similarity=0.434 Sum_probs=286.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++++|+.|++++++|+.+.+++.+++. ....| |+....+|+++++++++ . +++++|++++|+++.|..+++++
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~-~~~rY-Pd~~~~~l~~a~a~~~~----~-~~~~~V~~gnGsde~i~~l~~~~ 95 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALD-KLNRY-PDPDYRELRAALAEYYG----V-VDPENVLVGNGSDELIELLVRAF 95 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHH-hhccC-CCCcHHHHHHHHHHHhC----C-CCcceEEEcCChHHHHHHHHHHh
Confidence 589999999999999999999988876 46778 66688999999999974 2 57899999999999999999999
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
+.|||.|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+.+++++|++||||||||..++.++++++++
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~ 172 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLE 172 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999864 889999999999889999999999999999999999999998
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
.+.+ +.+||+||+|.+|.- .+...+....+|+++++||||.||++|+|+||+++++++++.+.+++.+|+ .
T Consensus 173 ~~~~--~~~vVvDEAY~eF~~-----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~--v 243 (356)
T COG0079 173 ALPE--GGLVVIDEAYIEFSP-----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN--V 243 (356)
T ss_pred hCCC--CcEEEEeCchhhcCC-----chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC--C
Confidence 8865 478888999999753 222222224678999999999999999999999999999999999998776 8
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
|.+++.++.++|.+ ++++++.++...+.|+++.+.|+++ |+. +.+++ +.|++++++.. ...
T Consensus 244 ~~~a~~aa~aal~~----~~~~~~~~~~~~~~r~rl~~~l~~~-~~~~v~pS~-aNFvlv~~~~~------------~~~ 305 (356)
T COG0079 244 SSPALAAAIAALRD----ADYLEESVERIREERERLYAALKAL-GLFGVFPSQ-ANFVLVRVPDA------------EAA 305 (356)
T ss_pred CHHHHHHHHHHccc----HHHHHHHHHHHHHHHHHHHHHHHhC-CCCeecCCC-CcEEEEECCCc------------cHH
Confidence 89999999999985 7999999999999999999999998 455 55444 66689998741 255
Q ss_pred HHHHHHHHcCCEEEECCCC-CCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 415 SLCRYLLDKAQVALVPGDA-FGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~-f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.+.+.|+++ ||.++.... ...++|+||+++..+|+ +++++.|.+++..
T Consensus 306 ~l~~~L~~~-giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 306 ALAEALLKK-GILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred HHHHHHHHC-CEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 788888876 999999865 33567999999997666 9999999888754
No 84
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-47 Score=379.64 Aligned_cols=328 Identities=21% Similarity=0.339 Sum_probs=275.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
+++|+|+.|+|++++|+.+.+++.+++.+....| |..|..+||++++++++ +++++|++|+|++++|..++++
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y-~~~~~~~lr~aia~~~~------~~~~~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLY-PDPNADALRQAIAAYYG------LDPEQVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcC-CCCcHHHHHHHHHHHhC------CCHHHEEEcCCHHHHHHHHHHH
Confidence 4689999999999988999999998776656788 55577999999999973 5889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+++|||+|++++|+|+.|...++..|++++.++++ ++|.+|++++++ .+++++++|||||||.+++.+++++|+
T Consensus 97 l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~ 170 (353)
T PRK05387 97 FFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERIL 170 (353)
T ss_pred hcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999985 357799999874 467889999999999999999998888
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc-cC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-TS 333 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~-~~ 333 (471)
+.+ + +++||+||+|.++ ++....++ ....+++++++||||.||++|+|+||+++++++++.+.+..... ..
T Consensus 171 ~~~--~-~~~livDe~y~~~--~~~~~~~~---~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~ 242 (353)
T PRK05387 171 AAN--P-DSVVVIDEAYVDF--GGESAIPL---IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSY 242 (353)
T ss_pred HhC--C-CcEEEEeCccccc--CCcchHHH---HhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCC
Confidence 754 4 7999999999875 33221222 12357899999999999999999999999999999998876543 45
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+++.++|.++.++|.+ .+++++.+++++++++.+.+.|+++ |+.+. |.+++|+|++++.. ++
T Consensus 243 ~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~ 304 (353)
T PRK05387 243 PLDRLAQAGAIAAIED----EAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSH------------DA 304 (353)
T ss_pred CcCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCC------------CH
Confidence 6889999999998874 6778889999999999999999988 88765 56778899988742 67
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.++++.|.++ ||.+.+....+.++++|++++ +.+++++++++|++++.
T Consensus 305 ~~~~~~l~~~-gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 305 AELAAKLRER-GIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHC-CEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 8899998765 999976443334679999998 55899999999998764
No 85
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.8e-47 Score=379.68 Aligned_cols=337 Identities=24% Similarity=0.311 Sum_probs=283.5
Q ss_pred hcCCCe-EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 92 QAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 92 ~~g~~~-i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
+.|.++ |+|+.|+|++++|+.+.+++.+.... ..+|++. +..+||++|++++ + +++++|++|+|+++++..
T Consensus 28 ~~g~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~~-~~~~Lr~~ia~~~----~--~~~~~I~it~G~~~~l~~ 99 (369)
T PRK08153 28 QRGRPFRARIGANESGFGPSPSVIAAMREAAAE-IWKYGDP-ENHDLRHALAAHH----G--VAPENIMVGEGIDGLLGL 99 (369)
T ss_pred hcCCcceeEecCCCCCCCCCHHHHHHHHHHHHH-hhcCCCC-ccHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHH
Confidence 356654 69999999999999999999887643 4678654 6899999999986 3 578999999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh-ccCCcEEEEcCCCCCcccCCCHHH
Q 012095 171 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 171 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l-~~~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
++.++++|||.|++++|+|+.|...++..|++++.+|++.+ .+|++.+++.+ ++++++|++++||||||.+++.++
T Consensus 100 ~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~ 176 (369)
T PRK08153 100 IVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHPAAD 176 (369)
T ss_pred HHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999998543 37999998766 467899999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~ 329 (471)
+++|+++|+ + +++||+||+|.++.+++. .. .+....+++++++||||.+|++|+|+||+++++++++.+.+...
T Consensus 177 l~~l~~~~~-~-~~~lI~DE~y~~~~~~~~-~~---~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~ 250 (369)
T PRK08153 177 IVAFIEALP-E-TTLLVLDEAYCETAPAGA-AP---PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRN 250 (369)
T ss_pred HHHHHHhCC-C-CcEEEEeCchhhhcCccc-ch---hhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhc
Confidence 999999886 5 789999999999877542 12 22223578999999999999999999999999999999988775
Q ss_pred cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCC
Q 012095 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (471)
Q Consensus 330 ~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~ 409 (471)
. ++.+.++|.++.++|.+ .+|+++.++.++++|+.+.+.|++. |+.+. |.+++|+|++++...
T Consensus 251 ~--~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~~--------- 313 (369)
T PRK08153 251 H--FGMNRIAQAAALAALKD----QAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRDG--------- 313 (369)
T ss_pred C--CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCCc---------
Confidence 4 46899999999999974 6889999999999999999999887 77654 678889999885310
Q ss_pred CCCHHHHHHHHHHcCCEEEE-CCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 410 IENSESLCRYLLDKAQVALV-PGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 410 ~~~~~~l~~~Ll~~~gV~v~-pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
....++.++|+++ ||.+. ||.. ..++++|++++ ++++++.+++.|++++...+
T Consensus 314 -~~a~~l~~~l~~~-Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 314 -AFARAVLDGLIAR-DIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred -ccHHHHHHHHHHC-CeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhh
Confidence 1567888888865 99995 6653 23579999999 56899999999999987654
No 86
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-47 Score=362.59 Aligned_cols=331 Identities=23% Similarity=0.295 Sum_probs=280.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEE
Q 012095 126 TRYTPNAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 204 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~-~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~ 204 (471)
.+|++..|.++|...+.++.. ..+...+..++|++|+|.+.++..+++.++++||.|+++.++|++....++..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 589999999999999999876 4555567778999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCcCCHHHHHhhhcc---------CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc
Q 012095 205 ILPTRISENFLLDPKVLESKLTE---------KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 274 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~---------~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~ 274 (471)
+|+++.+ ++++|.|++.+.. +++++| |++.+||||.+++.+++++|+++|++| |++||+||+|..+
T Consensus 174 pv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy-DfLIVeDdpYy~L 249 (472)
T KOG0634|consen 174 PVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY-DFLIVEDDPYYFL 249 (472)
T ss_pred eccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-CEEEEecCcccee
Confidence 9998654 3899999998742 467777 688899999999999999999999999 9999999999999
Q ss_pred ccCC---C-----C-----------ccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 275 IYAP---A-----T-----------HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 275 ~~~~---~-----~-----------~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
.|+. . + .+++.+++- .+|||.+.||||.++ ||+|+||+.+++-+++++.+.....+.++
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDt-dGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~p 327 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDT-DGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGP 327 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccc-cccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCc
Confidence 8862 1 1 123444443 689999999999997 99999999999999999999988889999
Q ss_pred ChHHHHHHHHHHhccCC--ChHHHHHHHHHHHHHHHHHHHHhcC-CCC--CeeeCCCcceEEeEecCCccCCcccCCCCC
Q 012095 336 SSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGE-LEG--VKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~-~~g--~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
+.+.|.++.+.|..... ..+|+.+++..|..||+.+..+|.+ +|+ +++.+|.+|||+|++++.. .. .....+
T Consensus 328 Sg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~-~~--~~~~~i 404 (472)
T KOG0634|consen 328 SGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYI-NF--DTKKSI 404 (472)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccc-cc--ccccch
Confidence 99999999998875311 1389999999999999999999998 564 6788999999999999821 11 111111
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCC------C-cEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGDD------T-CIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~~------~-~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
...+++...++.+.||.+++|++|..+ . ++|++++. +.|+++++++|+..++++.
T Consensus 405 ~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 405 NQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred HHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 235666666777789999999999743 2 89999998 8899999999999999874
No 87
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.4e-47 Score=381.84 Aligned_cols=336 Identities=26% Similarity=0.421 Sum_probs=286.2
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.+.++|+|+.|++++++++.+.+++.+.+.. ...|++. +..+||+++++++ | +++++|++|+|+++++..++
T Consensus 30 ~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~-~~~~lr~~ia~~~----~--~~~~~i~~t~G~~~~l~~~~ 101 (367)
T PRK02731 30 GIADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDG-SGFELKAALAEKF----G--VDPERIILGNGSDEILELLA 101 (367)
T ss_pred CCCceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-cHHHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 5668999999999998888899999887754 5778554 4579999999987 3 47789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
.+++++||+|++++|+|..|...++..|++++.++. +++.+|++.+++.+++++++|++++||||||.+++.+++++
T Consensus 102 ~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 178 (367)
T PRK02731 102 RAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVER 178 (367)
T ss_pred HHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHH
Confidence 999999999999999999999889999999999987 34679999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|++.++ + +++||+||+|.++.+++....++..+ ...+++++++||||.||++|+|+||+++++++++.+.+....+
T Consensus 179 l~~~~~-~-~~~li~De~y~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~- 254 (367)
T PRK02731 179 FLAGVP-P-DVLVVLDEAYAEYVRRKDYEDGLELV-AKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPF- 254 (367)
T ss_pred HHHhCC-C-CcEEEEECcHHHhccCcCcccHHHHH-hhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCC-
Confidence 988874 6 89999999999888754333333222 2357899999999999999999999999999999998876543
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
+.+.++|.++..+|+. ..++++.++.++++++.+.+.|++. |+.+. |.+|+|+|++++.. .+
T Consensus 255 -~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~-----------~~ 316 (367)
T PRK02731 255 -NVNSLALAAAVAALDD----DAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDG-----------KD 316 (367)
T ss_pred -CCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCC-----------CC
Confidence 4688999999999974 6788999999999999999999988 88776 45577899998643 26
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+.++++.|.++ ||.+.+|..|+.++++|++++ +.++++++++.|+++++
T Consensus 317 ~~~~~~~L~~~-gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 317 AAEAYQALLKR-GVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHC-CEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 78999988765 999999998887789999998 45788999999988764
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5e-47 Score=379.69 Aligned_cols=325 Identities=20% Similarity=0.275 Sum_probs=274.4
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
+++|+|+.|+|++++|+.+.+++.+.+.. ...|++ .+..+||++|++++ | +++++|++|+|+++++..++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~~Lr~aia~~~----~--v~~e~I~it~Gs~~ai~~~~~~ 114 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAAL-SGRYDL-ELEDDLRTLFAAQE----G--LPADHVMAYAGSSEPLNYAVLA 114 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCC-chHHHHHHHHHHHh----C--cChhhEEEcCChHHHHHHHHHH
Confidence 46899999999999999999999887653 356854 45899999999875 4 5889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
++++||+|++++|+|..|...++..|++++.++++. +|.+|++.+++. .++++++++||||||||.+++.+++++|+
T Consensus 115 l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~ 191 (370)
T PRK09105 115 FTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLL 191 (370)
T ss_pred HcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHH
Confidence 999999999999999999999999999999999864 577999999887 56789999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
+.+ ++ +++||+||+|.++... ++..++....+++++++||||.||++|||+||+++++++++.+... . ...
T Consensus 192 ~~~-~~-~~~lIvDEaY~~f~~~----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~--~~~ 262 (370)
T PRK09105 192 ANK-PA-GSVLLVDEAYIHFSDA----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-G--HNP 262 (370)
T ss_pred HhC-CC-CcEEEEECchHHhccC----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-C--CCC
Confidence 875 46 7999999999876421 2333443346789999999999999999999999999999998876 2 334
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
++.+.|.++.++|.+ .+|+++.++.++++++.+.+.|+++ |+.+.+|+++|| +++++. +..
T Consensus 263 ~~~~~~~aa~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~~f~-~~~~~~-------------~~~ 323 (370)
T PRK09105 263 LPVPAAAAGLASLRD----PKLVPQRRAENAAVREDTIAWLKKK-GYKCTPSQANCF-MVDVKR-------------PAK 323 (370)
T ss_pred cCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCCcEE-EEeCCC-------------CHH
Confidence 788899999999974 6889999999999999999999987 888888888887 467652 678
Q ss_pred HHHHHHHHcCCEEEECCCCCC-CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAFG-DDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f~-~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
++++.|+++ ||.+ |..|+ .++|+|++++. +++++++++.|++++
T Consensus 324 ~l~~~L~~~-gI~v--~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 324 AVADAMAKQ-GVFI--GRSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHC-CcEE--ecCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 899999876 9988 44453 36899999995 567788888877665
No 89
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-46 Score=375.52 Aligned_cols=327 Identities=22% Similarity=0.374 Sum_probs=273.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
+.++|+|+.|+|++++|+.+++++.+++.. ...+|++ .|..+||++++++++ .+ ..++|++|+|+++++..++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~----~~-~~~~I~~t~G~~~~i~~~~ 98 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG----VP-AGADVLLGNGSDELIQLLA 98 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC----cC-CCCcEEEcCCHHHHHHHHH
Confidence 357999999999999999999999998864 3567855 788999999999973 22 2358999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
.+++++||+|++++|+|..|...++..|++++.++++ ++|.+|++.+++++. .++++|++++||||||.+++.++++
T Consensus 99 ~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~ 176 (356)
T PRK04870 99 LACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVE 176 (356)
T ss_pred HHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999986 357899999999985 4899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+|+++| + .++|+||+|.++.+.. .... +. ..+++++++|||| ++++|+|+||+++++++++.+.+.+..
T Consensus 177 ~i~~~~--~--~~ii~De~y~~~~~~~-~~~~---~~-~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~- 245 (356)
T PRK04870 177 RIIEAA--P--GLVVVDEAYQPFAGDS-WLPR---LA-RFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPP- 245 (356)
T ss_pred HHHHHC--C--CEEEEECCchhhcCcc-hHHH---Hh-hCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCC-
Confidence 999888 3 5788899999875432 1111 22 2468999999999 899999999999999999998886643
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
++.+.++|.++..++++ .+++++.++.++++++.+.+.|++++|+.+. |.+++|+|++++
T Consensus 246 -~~~~~~~q~~a~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~-------------- 305 (356)
T PRK04870 246 -YNVNVLTQATALFALEH----VDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVP-------------- 305 (356)
T ss_pred -CcCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------
Confidence 45788999998888874 4668888899999999999999998888765 566778999886
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
+..++.+.|. ++||.+.||..|+. ++++||+++. .++.+++++.|.++
T Consensus 306 ~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 DAAAVFDGLK-TRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred CHHHHHHHHH-HCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 3467777665 55999999998863 5799999995 46777888877764
No 90
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=375.10 Aligned_cols=320 Identities=23% Similarity=0.377 Sum_probs=264.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
..|+|+.|++++++|+.+. ......| |.....+|++.+++++ | +++++|++|+|+++++..+++++
T Consensus 29 ~~~~l~~Nenp~~~~~~~~-------~~~~~~Y-p~~~~~~l~~~~a~~~----g--~~~~~I~~~~Gs~e~i~~~~~~~ 94 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT-------QQTLNRY-PECQPKAVIENYAAYA----G--VKPEQVLVSRGADEGIELLIRAF 94 (351)
T ss_pred CceEecCCCCCCCCChhhc-------ccccccC-CCCChHHHHHHHHHHh----C--CCHHHEEEcCCHHHHHHHHHHHh
Confidence 4699999999999876531 1234667 6655678888888775 5 58899999999999999999999
Q ss_pred cCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 176 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 176 ~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+++| |.|++++|+|..|...++..|++++.+|++. +|.+|++++++++ +++++|++||||||||.+++.+++++|+
T Consensus 95 ~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~ 171 (351)
T PRK01688 95 CEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLL 171 (351)
T ss_pred cCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9997 9999999999999999999999999999863 5889999999988 5899999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
+.|++ +.+||+||+|.+|... .+...+....+++++++||||.||++|+|+||+++++++++.+.+....+ +
T Consensus 172 ~~~~~--~~~vivDEay~~f~~~----~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--~ 243 (351)
T PRK01688 172 ELTRG--KAIVVADEAYIEFCPQ----ASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--P 243 (351)
T ss_pred HhCCC--CcEEEEECchhhcCCC----CChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--C
Confidence 99875 4679999999987632 12222223357999999999999999999999999999999998876554 4
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
.+.++|.++.++|.+. ..+++++.++.++++|+++.+.|++++|+....|.+++|+|++++ ++.
T Consensus 244 v~~~~~~~a~~~L~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~--------------~~~ 307 (351)
T PRK01688 244 LSTPVADIAAQALSPQ--GIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT--------------ASS 307 (351)
T ss_pred CCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------CHH
Confidence 7788888888888742 246788888999999999999999887775455667888999875 467
Q ss_pred HHHHHHHHcCCEEEECCCCC-CCCCcEEEEeecCHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAF-GDDTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f-~~~~~iRis~~~~~e~i~~~~~~l 458 (471)
++.++|+++ ||.++++..| +.++|+|||++. .++++++++.|
T Consensus 308 ~l~~~L~~~-gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al 350 (351)
T PRK01688 308 AVFKSLWDQ-GIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL 350 (351)
T ss_pred HHHHHHHHC-CeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence 899988865 9999987655 567899999995 57888888766
No 91
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-45 Score=366.99 Aligned_cols=324 Identities=23% Similarity=0.407 Sum_probs=266.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
..++|+.|+|++++|+.+.+++.+.+.. ...+|+ ..+..+||+++++++ + +++++|++|+|+++++..++.+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~lr~~ia~~~----~--~~~~~i~it~G~~~~l~~~~~~ 95 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEKLREELARYC----S--VVPTNIFVGNGSDEIIHLIMLA 95 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHHHHHHHHHHh----C--CCcccEEEecCHHHHHHHHHHH
Confidence 4699999999999999999999887764 346785 456789999999996 3 5789999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++|||+|++++|+|..|...++..|++++.++++ .+|.+|++.+++++++ ++|+|++++||||||.+++.+++++|
T Consensus 96 l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l 173 (351)
T PRK14807 96 FINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKI 173 (351)
T ss_pred hcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999986 3477999999999975 89999999999999999996665555
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
++++ +.++|+||+|.++. + ....+. + ...+++|+++||||.||++|+|+||+++++++++.+...+.. .
T Consensus 174 ---~~~~-~~~~ivDe~y~~~~-~-~~~~~~--~-~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--~ 242 (351)
T PRK14807 174 ---IEKS-RGIVVVDEAYFEFY-G-NTIVDV--I-NEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--Y 242 (351)
T ss_pred ---HHhC-CCEEEEeCcchhhc-c-cchHHH--h-hhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC--C
Confidence 5566 67788999998863 2 222222 1 235789999999999999999999999999999999876654 4
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+.+.++|.++..+|.. .++++..+.++++|+.+.+.|.+++|+.+. |.+|+|+|++++ +.
T Consensus 243 ~~~~~~q~~~~~~l~~-----~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~--------------~~ 302 (351)
T PRK14807 243 NINSLSQVIALKVLRT-----GVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK--------------DA 302 (351)
T ss_pred CcCHHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC--------------CH
Confidence 5789999999999873 456777778889999999999888888876 455678999886 46
Q ss_pred HHHHHHHHHcCCEEEECCCC-CCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDA-FGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~-f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.++++.|+++ ||.+.++.. ++.++++||+++.. ++.+++++.|+++
T Consensus 303 ~~~~~~l~~~-gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~ 349 (351)
T PRK14807 303 DYVYQGLLER-GILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKEL 349 (351)
T ss_pred HHHHHHHHHC-CEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHh
Confidence 6788887765 999988654 34568999999864 5566777776654
No 92
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-45 Score=369.48 Aligned_cols=325 Identities=24% Similarity=0.396 Sum_probs=264.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
..++++.+++.+++++... ....+|+ ..+..+||+++++++ | +++++|++|+|+++++..++.++
T Consensus 32 ~~~~~~~ne~~~~~~~~~~--------~~~~~Y~-~~~~~~lr~~ia~~~----~--~~~~~I~~t~G~~~~l~~~~~~~ 96 (364)
T PRK04781 32 GDVWLNANESAWANPADPD--------ASTRRYP-DPQPPGLRSALAALY----G--CAPEQLLIGRGSDEAIDLLVRAL 96 (364)
T ss_pred CCEEeeCCCCCCCCChhhc--------chhccCC-CCCHHHHHHHHHHHh----C--cChHHEEEeCCHHHHHHHHHHHh
Confidence 3689999999988765311 1245684 456799999999987 3 57899999999999999999999
Q ss_pred cCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC-CCCCcCCHHHHHhhh-ccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 176 CSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI-SENFLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 176 ~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~-~~~~~ld~e~l~~~l-~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+.+| |.|++++|+|..|...++..|++++.+|++. +++|.+|++++++.+ ++++++|++++||||||.+++.+++++
T Consensus 97 ~~~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~ 176 (364)
T PRK04781 97 CVPGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIER 176 (364)
T ss_pred cCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHH
Confidence 9999 7999999999999998999999999999853 356788999986654 678999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
|++.|+ + +++||+||+|.+|.+.. +........+++|+++||||.||++|+|+||+++++++++.+.+.+..+
T Consensus 177 l~~~~~-~-~~~iI~Deay~~f~~~~----~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~- 249 (364)
T PRK04781 177 ALQALQ-G-KALVVVDEAYGEFSDVP----SAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY- 249 (364)
T ss_pred HHHhCC-C-CcEEEEeCcchhhcCCc----chHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-
Confidence 999885 4 68999999999987532 2222223357899999999999999999999999999999999887644
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
+.++++|.++..+|.++ ..++..+.++.++++|+.+.+.|++++|+....|.+|+|+|++++ +
T Consensus 250 -~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~--------------~ 312 (364)
T PRK04781 250 -PVPTPCAALAEQALSAP--ALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD--------------D 312 (364)
T ss_pred -CCCHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC--------------C
Confidence 57899999999999763 135666677788999999999999887875445778899999986 3
Q ss_pred HHHHHHHHHHcCCEEEECCCCCC-CCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 413 SESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~-~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
..++.+.|.+ +||.+.||..|+ .++|+||+++.. ++.+++++.|+++
T Consensus 313 ~~~~~~~l~~-~gI~v~~~~~~~~~~~~~Ris~~~~-~~~~~l~~al~~~ 360 (364)
T PRK04781 313 AEAAFQALLA-AGVVVRDQRAAPRLSDALRITLGTP-EQNDRVLAALQRT 360 (364)
T ss_pred HHHHHHHHHH-CCeEEeeCCCCCCCCCeEEEeCCCH-HHHHHHHHHHHHH
Confidence 5678887765 599999998764 468999999974 5666666666654
No 93
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.7e-45 Score=363.88 Aligned_cols=313 Identities=18% Similarity=0.276 Sum_probs=252.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
.+|+|+.|++++... .....| |..-..+||++++++++ +++++|++|+|+++++..++. +
T Consensus 17 ~~i~l~~Nenp~~~~------------~~~~~Y-p~~~~~~lr~~ia~~~~------~~~~~I~it~Gs~~~l~~~~~-~ 76 (332)
T PRK06425 17 RIIDFSANINDFMDI------------GDISIY-PEISYTDIEDQIKIYTQ------GLKIKVLIGPGLTHFIYRLLS-Y 76 (332)
T ss_pred CEEEeccccCCCcCh------------hhcccC-cCcCHHHHHHHHHHHhC------CCcceEEECCCHHHHHHHHHH-H
Confidence 689999999988521 123568 66678999999999963 578999999999999999887 5
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
++||+ |++++|+|+.|...++..|++++.+|++. +++|.+.+++ .++++|++||||||||.+++.+++++|++
T Consensus 77 ~~~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~ 149 (332)
T PRK06425 77 INVGN-IIIVEPNFNEYKGYAFTHGIRISALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISE 149 (332)
T ss_pred hCCCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHH
Confidence 67864 66779999999999999999999999864 3457666553 37899999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
+|++| +++||+||+|.++.+++. .+...+....+++|+++||||.||++|+|+||+++++++++.+.+....+. .
T Consensus 150 ~a~~~-~~~iI~DE~Y~~~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~--~ 224 (332)
T PRK06425 150 ICRKK-GALLFIDEAFIDFVPNRA--EEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWS--V 224 (332)
T ss_pred HHHHc-CCEEEEecchhccccccc--hhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCc--c
Confidence 99999 999999999999987542 233344334579999999999999999999999999999999888654433 3
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
+.+++ .++..+. .+.++++.++.|+++|+.+.+.|+++ |+.+..+.+|+|+|++++ ++.+
T Consensus 225 ~~~~~----~~l~~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--------------~~~~ 284 (332)
T PRK06425 225 CDPAI----DFIRSID-LDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--------------DAHD 284 (332)
T ss_pred CHHHH----HHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--------------CHHH
Confidence 33332 2233211 25667888999999999999999988 888765556778999885 4678
Q ss_pred HHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 416 LCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+++.|+++ ||.+.||..|+. ++|+||+++.. ++.+++++.|++++
T Consensus 285 ~~~~l~~~-gi~v~~~~~f~~~~~~~iRis~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 285 FYSYLLKN-GILVRLLDDYECLGEQYIRIAIRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHC-CeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 99998875 999999999864 47999999975 57788888887764
No 94
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-45 Score=361.74 Aligned_cols=324 Identities=18% Similarity=0.293 Sum_probs=264.4
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.++++|+.|+|++++|+.+.+++.+.+.+ ..+|++..|..+||+++++++ | +++++|++|+|+++++..+++
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~aia~~~----~--~~~~~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERRARAAVAARH----G--RTPDEVLLLAGAAEGFALLAR 93 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHHHHHHHHHHh----C--cChhhEEECCCHHHHHHHHHh
Confidence 567999999999999999999999988754 567987889999999999996 3 578999999999999998887
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++| .++++.|+|..+...++..|.+++.++++. +|.+|++.+ .+++++++++|||||||.++|.++ |
T Consensus 94 --l~~~-~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~~---l 161 (349)
T PRK07908 94 --LRPR-RAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAEQ---L 161 (349)
T ss_pred --cCCC-eEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHHH---H
Confidence 5675 567789999999999999999999999864 377898855 457899999999999999999665 5
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
.++|+ + +.++|+||+|.++..+ . ..++... ..+++++++||||.||++|+|+||+++++++++.+.+.... .
T Consensus 162 ~~l~~-~-~~~iIvDe~y~~~~~~-~-~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~--~ 233 (349)
T PRK07908 162 LALRR-P-GRILVVDEAFADAVPG-E-PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAH--W 233 (349)
T ss_pred HHHHh-c-CCEEEEECcchhhccC-C-ccccccc--cCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCC--C
Confidence 55565 4 5678889999987543 2 3344332 24689999999999999999999999999999998876554 3
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
..+++.|.++..++... ...++++.+++++++|+++.+.|+++ |+++..|.+|+|+|++++ +.
T Consensus 234 ~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~--------------~~ 296 (349)
T PRK07908 234 PVGTLQLEAIAACCAPR--AVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVP--------------DA 296 (349)
T ss_pred CccHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECC--------------cH
Confidence 46677777776666521 24788899999999999999999998 899888899999999986 23
Q ss_pred HHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.++.+.| +++||.+.||..|+. +++||||++. +++++++++.|++++.
T Consensus 297 ~~~~~~l-~~~gI~v~~g~~f~~~~~~~vRis~~~-~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 ELLRKRL-RERGIAVRRGDTFPGLDPDYLRLAVRP-RAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHH-HhCCEEEEECCCCCCCCCCeEEEEeCC-CccHHHHHHHHHHHHh
Confidence 4566655 556999999998853 6899999964 4677888888777653
No 95
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-45 Score=360.99 Aligned_cols=316 Identities=22% Similarity=0.344 Sum_probs=257.1
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
.|+++|+|+.|+|++++|+.+++++.+++..+..+ | +..|.++||+++++++++. + +++++|++|+|++++|..+
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~-~--~~~~~i~it~Ga~~~i~~~ 92 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTD-F--LSKNNVSVGNGADEIIYVM 92 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCC-C--CCcceEEEcCCHHHHHHHH
Confidence 45689999999999999999999998877544334 6 5569999999999999754 2 5889999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
++++ |.|++++|+|+.|...++.+|++++.+|++. ++.++... + .++++++++|||||||.++++++++
T Consensus 93 ~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~ 161 (335)
T PRK14808 93 MLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFEREEIE 161 (335)
T ss_pred HHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 9887 7899999999999999999999999999864 34444332 2 3578999999999999999988887
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+|+ ++ +++||+||+|.+|. +....+.. ...+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus 162 ~l~----~~-~~~ii~DE~Y~~f~--~~~~~~~~---~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~- 230 (335)
T PRK14808 162 RIL----KT-GAFVALDEAYYEFH--GESYVDLL---KKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLP- 230 (335)
T ss_pred HHH----hc-CCEEEEECchhhhc--CCchHHHH---HhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCC-
Confidence 775 47 89999999999874 22111211 234689999999999999999999999999999999887643
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
++.+.++|.++..++++ .++..+.++.++++|+.+.+.|+++ |+++.+|+|+ |+|+.++..
T Consensus 231 -~~~~~~~q~a~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~g~-f~~~~l~~~------------ 291 (335)
T PRK14808 231 -FNVSYVSQMFAKVALDH----REIFEERTKFIVEERERMKSALREM-GYRITDSRGN-FVFIFMEKE------------ 291 (335)
T ss_pred -CCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCe-EEEEeCCCc------------
Confidence 55789999999888874 5677788888889999999999988 8888877665 579998742
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
+..++.++|.++ ||.|.. | .+++||+++.. ++.+++++.|++
T Consensus 292 ~~~~~~~~l~~~-Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 292 EKERLLEHLRAK-NIAVRS---F--REGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred cHHHHHHHHHHC-CeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence 567788877765 999985 3 47899998875 667777777764
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.3e-45 Score=363.37 Aligned_cols=326 Identities=27% Similarity=0.455 Sum_probs=271.1
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE-eCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i-t~G~~~al~~~ 171 (471)
.+.++|+|+.|++++++++.+.+++.+.+.. ...|++. ...+||+++++++ | +++++|++ |+|+++++..+
T Consensus 32 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~y~~~-~~~~lr~~ia~~~----~--~~~~~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 32 DPESIIKLGSNENPLGPSPKAVEAIEKELSK-IHRYPEP-DAPELREALSKYT----G--VPVENIIVGGDGMDEVIDTL 103 (361)
T ss_pred CccceEEccCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-CHHHHHHHHHHHh----C--CCHHHEEEeCCCHHHHHHHH
Confidence 3457999999999999988899988877654 5668544 4589999999986 3 57889999 79999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+++++++||.|++++|+|+.|...++..|++++.++.+ ++|.+|++.+++.++++++++++++|+||||.+++.+
T Consensus 104 ~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~--- 178 (361)
T PRK00950 104 MRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKRE--EDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEE--- 178 (361)
T ss_pred HHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHH---
Confidence 99999999999999999999999999999999999854 4577999999999988899999999999999999955
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
++.++|+++ +++||+||+|.++. +.....+ ....+++++++||||.+|++|+|+||+++++++++.+.+....+
T Consensus 179 ~l~~l~~~~-~~~li~De~y~~~~--~~~~~~~---~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~ 252 (361)
T PRK00950 179 DIRKILEST-DALVFVDEAYVEFA--EYDYTPL---ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF 252 (361)
T ss_pred HHHHHHHHC-CcEEEEECchhhhC--ccchHHH---HHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC
Confidence 555667788 99999999999875 2111122 12347899999999999999999999999999999998876544
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
+.+.+.|.++..+|.. .+++++.++.++++++.+.+.|. +.+ .|.+++|+|++++..
T Consensus 253 --~~~~~~~~~a~~~l~~----~~~~~~~~~~~~~~r~~l~~~l~----~~~-~~~~~~~i~~~~~~~------------ 309 (361)
T PRK00950 253 --SLTRLSQAAAIAALSD----KEYIEKSIEHGIKSREYLYNELP----FKV-YPSEANFVLVDVTPM------------ 309 (361)
T ss_pred --CCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHhhcC----eeE-CCCcceEEEEECCCC------------
Confidence 4778999999988874 67888889999999999988875 444 356778899998432
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
++.+++++|.++ ||.+.||..|+. ++++|++++ +.++++++++.|++++
T Consensus 310 ~~~~~~~~l~~~-gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 TAKEFCEELLKR-GVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred CHHHHHHHHHHC-CEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 688999998875 999999998854 469999998 5578999999998875
No 97
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=8.2e-45 Score=361.65 Aligned_cols=326 Identities=26% Similarity=0.443 Sum_probs=277.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|+|++|++++++|+.+++++.++.. ...+|++..+ .++|++++++++ +++++|++|+|+++++..++++
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~l~~~~~~ 90 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEAD-KLHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEIIELLIRA 90 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHH-HhhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHHHHHHHHH
Confidence 4799999999999999999999998764 3567866555 899999999974 4678999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
++++||+|++++|+|+.|...++..|++++.++++.+ +.+|++++++++++++++|++++|+||||.+++.+++++++
T Consensus 91 l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~ 168 (346)
T TIGR01141 91 FLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVL 168 (346)
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999998889999999999998643 66899999999888899999999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
+.++ + ++++|+||+|..+.+.+. ..... ...+++++++||||.+|++|+|+||+++++++++++...... ++
T Consensus 169 ~~~~-~-~~~ii~D~~y~~~~~~~~-~~~~~---~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~--~~ 240 (346)
T TIGR01141 169 ERTP-E-DALVVVDEAYGEFSGEPS-TLPLL---AEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP--FN 240 (346)
T ss_pred HhCC-C-CcEEEEECchhhhcCCcc-HHHHH---hhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC--CC
Confidence 9987 7 899999999997654321 11111 123578999999999999999999999999999998876543 45
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
.++++|.++..++.. ..++++.++.++++++.+.+.|.+++|+++. |.+++|+|++++. ++.
T Consensus 241 ~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-------------~~~ 302 (346)
T TIGR01141 241 LSRLAQAAAIAALRD----DDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-------------DAD 302 (346)
T ss_pred CCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-------------CHH
Confidence 789999999888875 4578889999999999999999988888865 5567889998863 467
Q ss_pred HHHHHHHHcCCEEEECCCCCCC-CCcEEEEeecCHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f~~-~~~iRis~~~~~e~i~~~~~~l 458 (471)
+++++|.++ ||.+.||..|+. ++++|+|++ ++++++++++.|
T Consensus 303 ~~~~~L~~~-gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 303 ALFEALLEK-GIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred HHHHHHHHC-CeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 889888765 999999998854 689999988 678888888776
No 98
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-45 Score=362.24 Aligned_cols=320 Identities=23% Similarity=0.368 Sum_probs=261.0
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.+.|+|+.|++++++|+.+ .. .....| |..+..+||+++++++ | +++++|++|+|++++|..++++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~------~~-~~~~~Y-p~~~~~~Lr~aia~~~----~--~~~~~I~it~Gs~~~i~~~~~~ 96 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL------DL-ARLNRY-PECQPPELINAYSAYA----G--VAPEQILTSRGADEAIELLIRA 96 (354)
T ss_pred CCcEEeeCCCCCCCCChhh------hh-HHhccC-CCCCHHHHHHHHHHHh----C--cCHHHEEEeCCHHHHHHHHHHH
Confidence 4579999999999988643 11 134678 4556899999999985 4 5889999999999999999999
Q ss_pred hcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 175 VCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 175 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++|| |+|++++|+|+.|...++..|++++.+|++. +|.+|++.+++ + +++|+|++||||||||.+++.+++++|
T Consensus 97 ~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l 172 (354)
T PRK04635 97 FCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQL 172 (354)
T ss_pred hcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999 9999999999999999999999999999863 47789999874 4 689999999999999999998888888
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
++.|+ +++||+||+|.++... .+...+....+++++++||||.||++|+|+||+++++++++.+.+.... +
T Consensus 173 ~~~~~---~~~vivDeay~~~~~~----~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~--~ 243 (354)
T PRK04635 173 IEMTP---DAIVVVDEAYIEFCPE----YSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAP--Y 243 (354)
T ss_pred HHhCC---CcEEEEeCchHhhccC----cchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCC--C
Confidence 88763 5899999999987532 1222332335789999999999999999999999999999998876543 4
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+.+.+.|.++.++|.+. ..+++++.++.++++|+.+.+.|++++++.+.+++| .|+|++++ +.
T Consensus 244 ~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g-~f~~~~~~--------------~~ 306 (354)
T PRK04635 244 PVPLPVSEIATQALSEA--GLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNG-NYVLAKFD--------------DV 306 (354)
T ss_pred CCCHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-cEEEEECC--------------CH
Confidence 57888898998888752 245677888899999999999999986688777764 57888875 35
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
.++.+.|. ++||.+.++..++.++++|||++ +.++++.+++.|++
T Consensus 307 ~~~~~~l~-~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~ 351 (354)
T PRK04635 307 DAVFKALW-DAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHH-HCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 67777665 55999988765556789999987 45788888888765
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=3.3e-44 Score=358.04 Aligned_cols=328 Identities=26% Similarity=0.424 Sum_probs=270.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+.|++++++|+.+.+++.+.+. ....| |..|..++|++++++++ +++++|++|+|+++++..++..+
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~y-~~~g~~~lr~~ia~~~~------~~~~~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAA-GVNRY-PDMGAVELRAALAEHLG------VPPEHVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHH-hcCcC-CCCcHHHHHHHHHHHhC------cCHHHEEECCCHHHHHHHHHHHh
Confidence 589999999999888899999988765 35667 67899999999999973 57789999999999999999999
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
++|||+|+++.|+|..|...++..|++++.++++++ +.+|++.++++++++++++++++||||||.+++.+++.++++
T Consensus 95 ~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~ 172 (352)
T PRK03321 95 AGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLD 172 (352)
T ss_pred cCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHH
Confidence 999999999999999999899999999999998643 568999999999889999999999999999999888888877
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
.+ ++ +++||+||+|.++.+++....++..+. ..+++++++||||.||++|+|+||+++++++++.+.+.. ...+.
T Consensus 173 ~~-~~-~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~~~~~ 247 (352)
T PRK03321 173 AV-PA-DVLVVLDEAYVEYVRDDDVPDGLELVR-DHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--VPFSV 247 (352)
T ss_pred hC-CC-CeEEEEechHHHhccCcCCCcHHHHHh-hCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--CCCCC
Confidence 65 46 899999999999988653322222232 247899999999999999999999999999999998764 34568
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
+.++|.++.++|.. ...+. +..+.+.++++.+.+.|.+. |+.+.+ .+|+|+|++++. ++.+
T Consensus 248 s~~~q~~a~~~l~~---~~~~~-~~~~~~~~~r~~~~~~L~~~-~~~~~~-~~g~~i~i~l~~-------------~~~~ 308 (352)
T PRK03321 248 NSLAQAAAIASLAA---EDELL-ERVDAVVAERDRVRAALRAA-GWTVPP-SQANFVWLPLGE-------------RTAD 308 (352)
T ss_pred CHHHHHHHHHHhcC---HHHHH-HHHHHHHHHHHHHHHHHHHC-CCccCC-CCCCEEEEeCCC-------------CHHH
Confidence 99999999888874 23444 44455556677888999887 776644 457889998852 5678
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 416 LCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+++.|.+ +||.+.+ |+ ++++||+++ +.+++++++++|++++.
T Consensus 309 ~~~~l~~-~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 309 FAAAAAE-AGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHH-CCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 9998755 5999987 43 457999986 44788899998888754
No 100
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-44 Score=338.24 Aligned_cols=332 Identities=23% Similarity=0.394 Sum_probs=287.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH-cCCE
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADAT 202 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~ 202 (471)
..|.+..|.+++|+++|+++.+..| +.++|+++++++|++.+...++-+|++|||.-|+|.|+|+++..-++. .|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 4687889999999999999987766 457899999999999999999999999999999999999999866654 5899
Q ss_pred EEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcccc
Q 012095 203 PVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY 276 (471)
Q Consensus 203 ~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~ 276 (471)
+++|.+..+++|+++++++|+++.+ +.|.++|.||+||-|.+++++++..+++++.++ ++.||+||+|..-+|
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k-niHvI~DEIya~sVF 273 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK-NIHVISDEIYAGSVF 273 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc-ceEEEeehhhccccc
Confidence 9999999999999999999998853 678999999999999999999999999999999 999999999999999
Q ss_pred CCCCccccccCCC----CCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccC
Q 012095 277 APATHTSFASLPG----MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY 351 (471)
Q Consensus 277 ~~~~~~~~~~~~~----~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~ 351 (471)
+.....++.++.. ..+++-++.|+||-||+||+|+|.++. +++++.+..+..+.. ..++..|..+...|.+.+
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~--~vSs~tQ~~la~LLSD~~ 351 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG--LVSSQTQYLLASLLSDEE 351 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc--CCcHHHHHHHHHHhchHH
Confidence 8776666655321 457899999999999999999999996 667888877766533 478999999999999755
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012095 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 431 (471)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg 431 (471)
..+.++++...+++.+.+++.+.|+++ |+.+.+.++|+|+|+++.+...... + +...++.++++++-++.+.||
T Consensus 352 f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~t--f---e~El~Lw~~i~~~vklnlSpG 425 (471)
T KOG0256|consen 352 FTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSLT--F---EGELELWERILDNVKLNLSPG 425 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceeecCCeeEEEEEhHHhcCcCC--h---HHHHHHHHHHHHhhccccCCC
Confidence 446778899999999999999999999 9999999999999999987653211 1 245688899998889999999
Q ss_pred CCCC--CCCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012095 432 DAFG--DDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 432 ~~f~--~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.|. .+||+|++|+. .++.++-+++||++++....
T Consensus 426 ~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 426 SSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred CcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 9986 46999999999 65666669999999987544
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=7e-44 Score=352.81 Aligned_cols=311 Identities=18% Similarity=0.213 Sum_probs=251.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+.|++++++|+....+ .. ...| |... .+||+++++++ |++ ++++|++|+|++++|..+.. +
T Consensus 25 ~~i~ls~Nenp~~~~~~~~~~--~~----~~~Y-p~~~-~~L~~~ia~~~----~~~-~~~~I~i~~Gs~e~i~~l~~-~ 90 (339)
T PRK06959 25 AWLDLSTGINPHGYPVPPVPA--DA----WRRL-PEDD-DGLAACAARYY----GAP-DAAHVLPVAGSQAAIRALPA-L 90 (339)
T ss_pred hhceeccCCCCCCCCCCCCCH--HH----HHhC-CCch-HHHHHHHHHHh----CCC-CcccEEECcCHHHHHHHHHH-h
Confidence 479999999998876222111 12 2357 5544 89999999886 542 45899999999999996654 5
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
+++|| |++++|+|+.|...++..|++++.++.+. +.+ .+.++++++||||||||.+++.+++++|++
T Consensus 91 ~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~ 157 (339)
T PRK06959 91 LPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPAARLLRWHA 157 (339)
T ss_pred cCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCHHHHHHHHH
Confidence 78887 88999999999999999999999988642 222 234578999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
.|+++ +.+||+||+|.++.+. .++..+.. .+++|+++||||.||++|+|+||+++++++++.+.+....+ +.
T Consensus 158 ~~~~~-~~~vI~DEay~~~~~~----~s~~~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~--~v 229 (339)
T PRK06959 158 QLAAR-GGTLIVDEAFADTLPA----ASLAAHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAW--TV 229 (339)
T ss_pred HHHHc-CCEEEEECCCccCCCc----ccchhccC-CCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCC--CC
Confidence 99988 8899999999997642 33434332 47799999999999999999999999999999999887654 47
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
+.++|.++.++|.+ .++.++.++.++++|+++.+.|+++ |+.+. .+++|+|++++ +..+
T Consensus 230 s~~~q~a~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--------------~~~~ 288 (339)
T PRK06959 230 SGPARHAVRAAFAD----AAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--------------RAAA 288 (339)
T ss_pred cHHHHHHHHHHhCc----HHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--------------CHHH
Confidence 88999999999974 6788899999999999999999998 77665 35788999875 4567
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 416 LCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.+.|.++ ||.+.. |+..+|+||+++.+.++++++++.|+++++.+.
T Consensus 289 l~~~l~~~-GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 289 LHAALARR-GIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred HHHHHHhC-CeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 88888766 999974 455679999997777888899988888776543
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=2e-43 Score=348.75 Aligned_cols=305 Identities=18% Similarity=0.231 Sum_probs=245.5
Q ss_pred CeEEcCCCCCCCCCh-HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTP-VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p-~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
++|+|+.|++++++| +.+.+ ..+ ..| |. +..+||++|++++ .+++|++|+|++++|..++
T Consensus 21 ~~i~l~~ne~p~~~~~~~~~~---~~~----~~y-p~-~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al~~~~-- 81 (330)
T PRK05664 21 DWLDLSTGIAPWPWPVPAIPA---DAW----ARL-PE-TDDGLEAAARAYY--------GAPQLLPVAGSQAAIQALP-- 81 (330)
T ss_pred HheeecCCcCCCCCCCcccCH---HHH----HhC-CC-ChHHHHHHHHHHh--------CCCCEEECcCHHHHHHHHH--
Confidence 579999998777654 33322 122 247 43 3489999999996 3479999999999999775
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
.+.+||+|++++|+|+.|...++..|++++.+|++ ++++++ +++++++++|||||||.+++.+++++|+
T Consensus 82 ~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~ 150 (330)
T PRK05664 82 RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWH 150 (330)
T ss_pred HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHH
Confidence 35899999999999999999999999999998753 344444 3678899999999999999999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
++|+++ +++||+||+|.++. + ..++..+.. .+++++++||||.||++|+|+||+++++++++.+.+....+ +
T Consensus 151 ~~~~~~-~~~iI~DE~y~~~~--~--~~s~~~~~~-~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~--~ 222 (330)
T PRK05664 151 ARLAAR-GGWLVVDEAFMDNT--P--QHSLAACAH-RPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW--T 222 (330)
T ss_pred HHHHhc-CCEEEEECCcccCC--C--ccccccccc-CCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCC--C
Confidence 999999 99999999998753 1 234455543 57899999999999999999999999999999998876543 4
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcc--eEEeEecCCccCCcccCCCCCCC
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA--FYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g--~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
.+.+.|.++..+|.+ ..+.++.++.++++|+++.+.|+++ |+. |.++ +|+|++++ +
T Consensus 223 ~~~~~~~~~~~~L~~----~~~~~~~~~~~~~~r~~l~~~L~~~-~~~---~~~~~~~f~~~~~~--------------~ 280 (330)
T PRK05664 223 VSGPTRWLAQAALAD----TPWQRRQRERLLAASQRLAALLRRH-GLT---PAGGCALFQWVRTE--------------D 280 (330)
T ss_pred CCHHHHHHHHHHHhC----hHHHHHHHHHHHHHHHHHHHHHHHC-CCc---ccCCcceEEEEecC--------------C
Confidence 678999999999985 4667888999999999999999987 664 4444 77888764 5
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+.++.+.|.++ ||.+.+ |+.++++||+++.+.++++++++.|+++.++
T Consensus 281 ~~~~~~~l~~~-gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 AAALHEFLARR-GILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHC-CeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 67888887655 999974 5566899999997667777777777666543
No 103
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-43 Score=348.29 Aligned_cols=318 Identities=22% Similarity=0.371 Sum_probs=257.0
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
+.+.|+|+.|++++++|+.+.+++.+++.. ...+| |..|.++||++++++++ +++++|++|+|+++++..++
T Consensus 17 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~g~~~lr~~ia~~~~------~~~~~I~~t~G~~~~l~~~~ 89 (337)
T PRK03967 17 GNYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRY-PHITSDPLREAIAEFYG------LDAENIAVGNGSDELISYLV 89 (337)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHhhcCccccC-CCCCHHHHHHHHHHHhC------cCcceEEEcCCHHHHHHHHH
Confidence 346899999999998889999999988754 45778 56799999999999973 58899999999999999888
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
..+ +||+|++++|+|+.|...++..|++++.++++. +|.+|++.+++.+ ++++++++++||||||.+++.+++.+
T Consensus 90 ~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~ 164 (337)
T PRK03967 90 KLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILK 164 (337)
T ss_pred HHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 766 799999999999999998999999999999863 4779999998865 57889999999999999999766655
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT 332 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~ 332 (471)
+ + ++ +++||+||+|.++... .. ..+....+++|+++||||.||++|+|+||+++++++++.+.+....+
T Consensus 165 i---~-~~-~~~ii~De~y~~~~~~--~~---~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~- 233 (337)
T PRK03967 165 V---L-ET-GKPVVLDEAYAEFSGK--SL---IGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF- 233 (337)
T ss_pred H---H-hc-CCEEEEECchhhhccc--ch---HHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC-
Confidence 4 4 47 8999999999987521 11 11112246899999999999999999999999999999998876543
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 412 (471)
+.+.++|.++..+|.+ .++..+.++.+.++|+.+.+.|.+. ..|.+++|+|++++
T Consensus 234 -~~~~~~q~~~~~~l~~----~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~~--------------- 288 (337)
T PRK03967 234 -SLNILTMKIVRLALDH----YDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKLD--------------- 288 (337)
T ss_pred -CCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhHH---------------
Confidence 5789999999999974 4567666677778888888888764 24678999998652
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+.+.|+++ ||.+.++.. ..++++||+++.. ++.+++++.|+++.+.+
T Consensus 289 ---~~~~l~~~-gi~v~~~~~-~~~~~~Ri~~~~~-~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 289 ---AYDYLLEN-GIVVRKLSG-RLEGHIRVTVGKR-EENDEFIKALKEIKEGY 335 (337)
T ss_pred ---HHHHHHHC-CEEEEeCCC-CCCCeEEEecCCH-HHHHHHHHHHHHHHHhc
Confidence 56777765 999998753 3467999999873 45566666666665543
No 104
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=5.4e-43 Score=345.78 Aligned_cols=320 Identities=22% Similarity=0.328 Sum_probs=262.0
Q ss_pred HHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 86 QATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 86 ~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
.++++..++++.++|+.|.|++++| ..+.. .+...+|++..+ ++||+.+++++ | +++++|++|+|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~y~~~~~-~~lr~~la~~~----~--~~~~~i~~t~G~~ 74 (330)
T TIGR01140 8 AAARYGIPPEDWLDFSTGINPLGPP--VPPIP----ASAWARYPDPEY-DELRAAAAAYY----G--LPAASVLPVNGAQ 74 (330)
T ss_pred HHHHcCCChhheeEccccCCCCCCC--hhhcc----hHHHhhCCCccH-HHHHHHHHHHh----C--CChhhEEECCCHH
Confidence 3444445567899999999888776 22211 123467865555 99999999986 3 4689999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 166 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
+++..+..+ +.+| .|++++|+|..|...++..|.+++.++ |++.+++.+ ++++++++++||||||.++
T Consensus 75 ~~i~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~ 142 (330)
T TIGR01140 75 EAIYLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAAL-EELDVLVLCNPNNPTGRLI 142 (330)
T ss_pred HHHHHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhc-ccCCEEEEeCCCCCCCCCC
Confidence 999987665 5778 699999999999999999999998886 788898888 4678899999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+.+++++|+++|++| |++||+||+|.++.+.. ++..+....+++|+++||||.+|++|+|+||+++++++++.+.
T Consensus 143 ~~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~ 217 (330)
T TIGR01140 143 PPETLLALAARLRAR-GGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLR 217 (330)
T ss_pred CHHHHHHHHHHhHhc-CCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHH
Confidence 999999999999999 99999999999876531 2222222357899999999999999999999999999999988
Q ss_pred HHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCccc
Q 012095 326 KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAE 405 (471)
Q Consensus 326 ~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~ 405 (471)
..... .+.+.++|.++..+++. ..|.++.++.++++++.+.+.|++++++++. |.+++|+|++++
T Consensus 218 ~~~~~--~~~s~~~q~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~-------- 282 (330)
T TIGR01140 218 EALGP--WTVNGPARAAGRAALAD----TAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP-------- 282 (330)
T ss_pred hcCCC--CCchHHHHHHHHHHHhc----hHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC--------
Confidence 87643 45788999999999984 5778888999999999999999998546654 567899999875
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHH
Q 012095 406 GFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 406 ~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~~~e~i~~~~~~l 458 (471)
+..+++++|+++ ||.+.||..|+ ..+++|++++...++ ++++.+|
T Consensus 283 ------~~~~l~~~l~~~-gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 ------DAAALHEALARR-GILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ------CHHHHHHHHHHC-CEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 456899998875 99999999995 347999999986555 7766655
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.4e-42 Score=338.37 Aligned_cols=299 Identities=20% Similarity=0.336 Sum_probs=234.3
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+.|+++++ |+.+.+++.+++.. ...| |. ...||+++++++ | ++|++|+|+++++..++..+
T Consensus 9 ~~i~l~~~~np~~-p~~~~~a~~~~~~~-~~~y-p~--~~~l~~~ia~~~----~-----~~I~vt~G~~~al~~~~~~~ 74 (311)
T PRK08354 9 GLIDFSASVNPYP-PEWLDEMFERAKEI-SGRY-TY--YEWLEEEFSKLF----G-----EPIVITAGITEALYLIGILA 74 (311)
T ss_pred ceeEecCCCCCCC-CHHHHHHHHHHHHH-hhcC-CC--hHHHHHHHHHHH----C-----CCEEECCCHHHHHHHHHHhh
Confidence 5899999998886 57888888877543 4567 32 467899888875 3 47999999999999877544
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
.+||+|++++|+|+.|...++..|++++.++ +|++.+++.++ ++++++++|||||||.+++.+++++|++
T Consensus 75 -~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~ 144 (311)
T PRK08354 75 -LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLD 144 (311)
T ss_pred -CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHH
Confidence 5999999999999999999999999997653 58889988876 5788999999999999999999999999
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCC
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~ 335 (471)
+|++| +++||+||+|.+|.+++. . .. .+++++++||||.||++|+|+||+++ +++.+.+....+. .
T Consensus 145 ~a~~~-~~~li~De~y~~f~~~~~-~-----~~--~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~--~ 210 (311)
T PRK08354 145 AVEDR-NALLILDEAFIDFVKKPE-S-----PE--GENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWS--I 210 (311)
T ss_pred Hhhhc-CcEEEEeCcchhcccccc-c-----cC--CCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCcc--C
Confidence 99999 999999999999987642 1 11 57899999999999999999999998 5666666554433 5
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
+.+.+.++.+++.. ..+++.+.++.+.++++.+.+.+ ..+|+++||+ ++++ ++.+
T Consensus 211 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~l-------~~~~~~~~~~-~~~~--------------~~~~ 265 (311)
T PRK08354 211 GSTGYAFLEFLIED---DFEHLRKTMPLIWREKERFEKAL-------YVKSDANFFI-KDVG--------------DAEK 265 (311)
T ss_pred CHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHhc-------CCCCCCcEEE-EECC--------------CHHH
Confidence 56667777666653 23566666666677766655544 1257777765 5553 4678
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHH
Q 012095 416 LCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIK 459 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~ 459 (471)
+++.|.++ ||.+.||..|+.++|+||+++..+ +.+++++.|+
T Consensus 266 ~~~~l~~~-gv~v~~g~~f~~~~~iRi~~~~~~-~~~~l~~al~ 307 (311)
T PRK08354 266 FVEFLKRN-GILVRDCTSFGLPGYIRFSVRDRE-ENEKLIRALR 307 (311)
T ss_pred HHHHHHHC-CeEEEecccCCCCCeEEEEeCCHH-HHHHHHHHHH
Confidence 88887655 999999999988899999999743 3334444433
No 106
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=5.6e-41 Score=342.13 Aligned_cols=367 Identities=17% Similarity=0.201 Sum_probs=291.8
Q ss_pred cccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC--CCCChH---HHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH
Q 012095 71 RVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP--DFDTPV---LIAEAGINAIREGFTRYTPNAGTLELRSAICHKL 145 (471)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~--~~~~p~---~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~ 145 (471)
+++.++++.+..+.++++.++++|.++|+|+.|+| ++.+|. .+.+++.+++..+..+|++..|.++||+++++++
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~ 91 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF 91 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh
Confidence 55667777777888888889999999999999998 788765 6889999988888889999999999999999997
Q ss_pred HHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC------CCCc--CC
Q 012095 146 KEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS------ENFL--LD 217 (471)
Q Consensus 146 ~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~------~~~~--ld 217 (471)
+ .+++++|+|+++++..++.++++||| |++++|.|.+|...+...|++++.+++++. ++|. +|
T Consensus 92 ~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id 162 (460)
T PRK13238 92 G--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFD 162 (460)
T ss_pred C--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcC
Confidence 3 35799999999999999999999999 999999999999999999999999998642 3454 99
Q ss_pred HHHHHhhhcc----CCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCC--ccccCC-----CCccccc
Q 012095 218 PKVLESKLTE----KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYE--HIIYAP-----ATHTSFA 285 (471)
Q Consensus 218 ~e~l~~~l~~----~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~--~~~~~~-----~~~~~~~ 285 (471)
+++|++.+++ ++++|++++|+|||| .+++.+++++|.++|++| |++||+|+++. ...|.. ....++.
T Consensus 163 ~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~-gi~li~Daa~~~e~a~f~~~~e~g~~~~si~ 241 (460)
T PRK13238 163 LEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY-GIPVVIDAARFAENAYFIKQREPGYKDKSIK 241 (460)
T ss_pred HHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECcchhhhhhhhhhccccccCCCHH
Confidence 9999999974 689999999999998 999999999999999999 99999999763 343422 1122222
Q ss_pred cCCCCCCceEEEecCCcccCccchhhe------eeEcC-HHHHHHHHHHH----hcccCCC-ChHHHHHHHHHHhccCCC
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRLG------YIAGP-KHFVAACNKIQ----SQFTSGA-SSISQKAGVAALGLGYAG 353 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~G------~v~~~-~~~i~~l~~~~----~~~~~~~-~~~~q~aa~~~L~~~~~~ 353 (471)
. -+..++|++|.+.++|||+| |++++ ++++++++... ...+++. +...|.|+...|.+.. .
T Consensus 242 ~------i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~-~ 314 (460)
T PRK13238 242 E------IAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM-D 314 (460)
T ss_pred H------HhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh-C
Confidence 1 13456788999988899874 55666 57888887663 2324444 4444777777675311 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCC-cccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFGKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
++++..+ .+++++|.+.|.+. |+.+..|.||||+++++...... ...++ .+.+|+.+|+++.||.+.|++
T Consensus 315 ~~~~~~~----~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~----~~~~~a~~L~~e~GV~~~~~~ 385 (460)
T PRK13238 315 EDYLAYR----IGQVEYLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQF----PAQALACELYLEAGIRGVEIG 385 (460)
T ss_pred hHHHHHH----HHHHHHHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCC----chHHHHHHHHHHcCeeeeccc
Confidence 3334333 33679999999887 99999999999999998653210 01111 457899999999999999999
Q ss_pred CCCC-------------CCcEEEEeec---CHHHHHHHHHHHHHHHH
Q 012095 433 AFGD-------------DTCIRISYAA---SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 433 ~f~~-------------~~~iRis~~~---~~e~i~~~~~~l~~~l~ 463 (471)
.|.. .+++|+++.. +.++++.+.++|.++.+
T Consensus 386 ~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 386 SLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 8752 2589999998 99999999999998764
No 107
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=9.3e-38 Score=310.69 Aligned_cols=345 Identities=37% Similarity=0.641 Sum_probs=287.6
Q ss_pred EEcCCCCCCCCChHHHHHHHHH-HHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 012095 98 IRLAAGEPDFDTPVLIAEAGIN-AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~ 176 (471)
|+|+.|++++.+++.++.+..+ ........|.+..|..++++.+++++...+|.+...+++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 5789999998887777666654 222345678889999999999999999888766667899999999999999999999
Q ss_pred CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
++||+|+++.|+|.++...++..|.+++.++.+.+..+..+.+.++....+++++|++++|+||||.+++.+++++|+++
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999765543333367777777889999999999999999999999999999
Q ss_pred HHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH-HHHHHHHHHHhcccCCC
Q 012095 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQFTSGA 335 (471)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l~~~~~~~~~~~ 335 (471)
|+++ |+++|+|++|..+.+.+....... .....+.+++++|++|.++++|.|+||+++++ ++++.+.........++
T Consensus 161 ~~~~-~~~~ivD~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 238 (350)
T cd00609 161 AKKH-GILIISDEAYAELVYDGEPPPALA-LLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGP 238 (350)
T ss_pred HHhC-CeEEEEecchhhceeCCccccccc-CcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCC
Confidence 9999 999999999998877554322111 22335678999999999998999999999999 89999988877767789
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHH
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
+...+.++..+|.. ..++.++.++.++++++++.+.|++.+...+..+.+++++|++++.. ...+
T Consensus 239 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~------------~~~~ 303 (350)
T cd00609 239 STLSQAAAAAALDD---GEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG------------DDEE 303 (350)
T ss_pred ChHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCC------------ChHH
Confidence 99999999999886 23788899999999999999999987444435678899999998753 2345
Q ss_pred HHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHHH
Q 012095 416 LCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERIK 459 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~~~e~i~~~~~~l~ 459 (471)
++.++++++||.+.++..|. ...++|++++...+++++++++|+
T Consensus 304 ~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 304 FLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 55556667799999998886 678999999998889999999875
No 108
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-37 Score=277.39 Aligned_cols=367 Identities=19% Similarity=0.317 Sum_probs=279.2
Q ss_pred hHHHHHHHH-HHHHhcCCCeEEcCCCCCCCCC--hHHHHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHHHHHhC
Q 012095 79 KTVAITDQA-TALAQAGVSVIRLAAGEPDFDT--PVLIAEAGINAIREG-----FTRYTPNAGTLELRSAICHKLKEENG 150 (471)
Q Consensus 79 ~~~~~~~~~-~~~~~~g~~~i~l~~g~~~~~~--p~~v~~a~~~~~~~~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g 150 (471)
.+..+++.. ..++..| .|.|+.|+|..-| ..-+.+-..+.+.++ ..+|+.++|...|.+++++.+++++|
T Consensus 15 Gi~~lMdDl~d~Lrt~g--~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 15 GITQLMDDLNDGLRTPG--AIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred hHHHHHHHHHhhccCCC--ceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 344444433 3333333 9999999987544 123444444444433 46899999999999999999999999
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhcC---CC--CeEEEc-CCCCCChHHHHHHcCCEEEE---ecCCCCCC--CcCCHH
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAVCS---PG--DEVIIP-APFWVSYPEMARIADATPVI---LPTRISEN--FLLDPK 219 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l~~---~g--d~Vlv~-~p~y~~~~~~~~~~G~~~~~---v~~~~~~~--~~ld~e 219 (471)
+++++.||.+|+|++.+.+.++..+.. .| ..|++| .|.|.+|.++...-..-|.. +...+.+. |.+|.+
T Consensus 93 wnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~ 172 (417)
T COG3977 93 WNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFE 172 (417)
T ss_pred CCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccceeeccCHH
Confidence 999999999999999999988888753 24 345554 79999987653322211111 11112232 456766
Q ss_pred HHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC-CCCCceEEEe
Q 012095 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVN 298 (471)
Q Consensus 220 ~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 298 (471)
++. +.+++.+|+++-|.||||.+++.+|+.+|..++++| ++.+|+|.+|+. +-+..-+.++. -..+|+|.|.
T Consensus 173 ~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~-giPliIDnAYg~----PFP~iifsd~~~~w~~NiilC~ 245 (417)
T COG3977 173 HLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH-GIPLIIDNAYGV----PFPGIIFSDATPLWNENIILCM 245 (417)
T ss_pred Hcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc-CCcEEEecccCC----CCCceecccccccCCCCEEEEe
Confidence 664 357899999999999999999999999999999999 999999999974 11112222221 1247899999
Q ss_pred cCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-
Q 012095 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE- 377 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~- 377 (471)
|+||. |+||.|+|.+++++++++.+.......+..+..++++++..+++.+...+-.-+-++..|+++.+...+.|+.
T Consensus 246 SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~ 324 (417)
T COG3977 246 SLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRY 324 (417)
T ss_pred ehhhc-CCCCcceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 99997 8999999999999999999999988888899999999999999875432222334567788888888887776
Q ss_pred CC--CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---------CCcEEEEeec
Q 012095 378 LE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---------DTCIRISYAA 446 (471)
Q Consensus 378 ~~--g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---------~~~iRis~~~ 446 (471)
+| .+.+.+|+|+.|+|+.+.+.. .+.+++.++|.++ ||.++||..|.. ..|+|+++..
T Consensus 325 lp~~~~~iHkpEGAIFlWLWf~dLP----------Itt~~LYq~LKa~-Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~ 393 (417)
T COG3977 325 LPEYRCLIHKPEGAIFLWLWFKDLP----------ITTEELYQRLKAR-GVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP 393 (417)
T ss_pred cCccceeeecCCcceeehhhhccCC----------CCHHHHHHHHHhC-eEEEecccccCCCCCCCCCCccceEEEecCC
Confidence 43 367789999999999987652 3788999987665 999999999864 2589999999
Q ss_pred CHHHHHHHHHHHHHHHHhhC
Q 012095 447 SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++.|++++.+|.+.+++.-
T Consensus 394 ~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 394 EPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988753
No 109
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-37 Score=288.83 Aligned_cols=351 Identities=23% Similarity=0.352 Sum_probs=277.0
Q ss_pred hHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC-CCCeEEEc
Q 012095 110 PVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-PGDEVIIP 185 (471)
Q Consensus 110 p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~ 185 (471)
|..+++...+.+.. ....|+.++|++-+|+.+|+++.++.|.+.+|++|++|.|++.++..++..++. +.|.|++|
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliP 167 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIP 167 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEee
Confidence 44455555555543 346799999999999999999999999889999999999999999999988864 67999999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
-|.|+-|...+.+.|+..+.+.++++++|.+|.++|++.+.+ +++++++.||.||||.+++++-+++|+.+|.++
T Consensus 168 iPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~ 247 (475)
T KOG0258|consen 168 IPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE 247 (475)
T ss_pred cCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999988754 688999999999999999999999999999999
Q ss_pred CCeEEEEccCCCccccCCC-Ccccccc----CCCC---CCceEEEecCCccc-CccchhheeeE---cCHHHHHHHHHHH
Q 012095 261 PRLLVLSDEIYEHIIYAPA-THTSFAS----LPGM---WERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQ 328 (471)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~-~~~~~~~----~~~~---~~~~i~~~S~SK~~-g~~G~R~G~v~---~~~~~i~~l~~~~ 328 (471)
+++|+.||+|.+-+|.+. ...++.. +... .-.++.++|.||.+ |=.|.|-||+- .++++.+.+.+..
T Consensus 248 -~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~ 326 (475)
T KOG0258|consen 248 -GLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLA 326 (475)
T ss_pred -CeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHH
Confidence 999999999999888653 3444332 2211 12356788889998 56889999965 3667777777665
Q ss_pred hcccCCCChHHHHHHHHHHhccCC-------ChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 329 SQFTSGASSISQKAGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
. ...|++..+|...-....-+.. .....+.+...++++...+.+.++.++|+.+.+++|+||+|.++.-+..
T Consensus 327 s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~k 405 (475)
T KOG0258|consen 327 S-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPK 405 (475)
T ss_pred h-hhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHH
Confidence 4 4557788888776665553211 1123456778889999999999999999999999999999977642211
Q ss_pred -CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-C--cEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 402 -SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD-T--CIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 402 -~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~-~--~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+++...+...+.-.|.+||+..||+++||++||.. | ++|.++-... + +.++++.++=.++
T Consensus 406 aie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 406 AIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEF 470 (475)
T ss_pred HHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHH
Confidence 122222233466777899999999999999999964 3 7999998854 3 6666666654443
No 110
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=1.1e-35 Score=293.80 Aligned_cols=309 Identities=20% Similarity=0.239 Sum_probs=242.8
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEE
Q 012095 105 PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVII 184 (471)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv 184 (471)
..+...+.++++..+++.. |+ |..++.+.+.+.+++.+|. +++++++++|+.+++..++.++++|||.|++
T Consensus 30 lgl~~~~~~~~~~~~~~~~----~~---g~~~~~~~Le~~lA~~~g~--~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli 100 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLET----YV---GPAIFEEKVQELGREHLGG--PEEKILVFNRTSSAILATILALEPPGRKVVH 100 (346)
T ss_pred ccCCCChhHHHHHHHHHHH----hc---CCHHHHHHHHHHHHHHcCC--CcceEEEECCHHHHHHHHHHHhCCCCCEEEE
Confidence 3445577888888887755 42 6678888888888888884 6789999999999999999999999999997
Q ss_pred c---CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012095 185 P---APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (471)
Q Consensus 185 ~---~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~ 261 (471)
+ .|+|++|...++..|++++.+ .++++++. .+++++|++ +++||+|.+++.+++++|+++|++|
T Consensus 101 ~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~- 167 (346)
T TIGR03576 101 YLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSK- 167 (346)
T ss_pred CCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHc-
Confidence 4 579999999999999986432 14555433 246787777 4579999999999999999999999
Q ss_pred CeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHH
Q 012095 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQK 341 (471)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~ 341 (471)
+++||+||+|..++.+.....+.... +..+++.|||| +++|+|+||+++++++++.+.+...++.++++++.|.
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~~~~~----~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~ 241 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPPALDL----GADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLA 241 (346)
T ss_pred CCEEEEECCccccccccCCCCCHHHc----CCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHH
Confidence 99999999999865431111122222 22377889999 5689999999999999999999988888778999999
Q ss_pred HHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHH
Q 012095 342 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (471)
Q Consensus 342 aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll 421 (471)
++.++|+. .. .+..++.++++++++.+.+++ +.+.++.++ |+|++++.. ++.+++..++
T Consensus 242 aa~~aL~~---~~--~~~~~~~l~~r~~~~~~~l~~---~~~~~~~~~-f~~~~~~~~------------~~~~~~~~ll 300 (346)
T TIGR03576 242 AVVRALEE---FE--LSRIRDAFKRKEEVYLRLFDK---LNVERTPTG-FVIKGVEEE------------KLIEIGLDLL 300 (346)
T ss_pred HHHHHHhh---cc--HHHHHHHHHHHHHHHHHHHHh---CCCCcCCCe-EEEEeCCCC------------CHHHHHHHHH
Confidence 99999974 12 356678899999988888874 344444455 699998642 4557788888
Q ss_pred HcCCEEEECCCCCC-CCCcEEEEeecCHH---HHHHHHHHHHHHH
Q 012095 422 DKAQVALVPGDAFG-DDTCIRISYAASLT---TLQAAVERIKKGL 462 (471)
Q Consensus 422 ~~~gV~v~pg~~f~-~~~~iRis~~~~~e---~i~~~~~~l~~~l 462 (471)
+++||.++||+.|. .++|+|||++.+++ +++.+++.|++.+
T Consensus 301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 88899999999884 47899999999765 7888888887654
No 111
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=4e-36 Score=302.34 Aligned_cols=352 Identities=18% Similarity=0.187 Sum_probs=270.9
Q ss_pred HHHHHhcCCCeEEcCCCCC--CCCCh---HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEe
Q 012095 87 ATALAQAGVSVIRLAAGEP--DFDTP---VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS 161 (471)
Q Consensus 87 ~~~~~~~g~~~i~l~~g~~--~~~~p---~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it 161 (471)
++.+++.|.+++.|..+++ ++.++ ..+.+++.+++..+...|+++.|.++|+++++++++ .+++++|
T Consensus 3 ~~~l~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t 74 (431)
T cd00617 3 ERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFG--------FKHIIPT 74 (431)
T ss_pred HHHHHHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHC--------CCeEEEc
Confidence 4567789999999999999 77776 478888888887778889999999999999999973 3689999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC--------CcCCHHHHHhhhccC----C
Q 012095 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN--------FLLDPKVLESKLTEK----S 229 (471)
Q Consensus 162 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~--------~~ld~e~l~~~l~~~----~ 229 (471)
+|+++++..++.++++|||+| +++|.|..|...+...|++++.++++++.+ +++|+++|+++++++ +
T Consensus 75 ~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~ 153 (431)
T cd00617 75 HQGRGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENI 153 (431)
T ss_pred CCHHHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCc
Confidence 999999999999999999988 699999999999999999999999975432 459999999999865 7
Q ss_pred cEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEEccCCC--cccc-----CCCCccccccCCCCCCceEEEecCC
Q 012095 230 RLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYE--HIIY-----APATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 230 ~~i~i~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~--~~~~-----~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
++|++++|+||+ |.+++.+++++|.++|++| |++||+|++.. ...| ++....++. +.++.+.|+|
T Consensus 154 ~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~-gi~li~DaAr~~~na~~i~~r~~g~~~~si~------ei~~e~~s~s 226 (431)
T cd00617 154 PYIVLTITNNTAGGQPVSMANLREVRELAHKY-GIPVVLDAARFAENAYFIKEREEGYRDKSIA------EIAREMFSYA 226 (431)
T ss_pred cEEEEECCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhHhhhhhhhcccccccCCCHH------HHHHHhhccC
Confidence 889999999998 9999999999999999999 99999999943 2222 122222222 2345688999
Q ss_pred cccCccchh------heeeEcCH-HHHHHHHHHHh----cccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHH
Q 012095 302 KAFAMTGWR------LGYIAGPK-HFVAACNKIQS----QFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 369 (471)
Q Consensus 302 K~~g~~G~R------~G~v~~~~-~~i~~l~~~~~----~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~ 369 (471)
|.+.|+||| .||+++++ +++++++.... ..++ +.+.....++..+|.+.. + .+.+.++++ +++
T Consensus 227 d~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~---~-~~~l~~~~~-~r~ 301 (431)
T cd00617 227 DGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAV---E-EDYLRHRVE-QVR 301 (431)
T ss_pred CEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcc---c-HHHHHHHHH-HHH
Confidence 999999998 56999986 58888775321 1111 223333333333565411 1 223333333 558
Q ss_pred HHHHHhcCCCCCeeeCCCcceEEeEecCCccC-CcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCC-CC-----------
Q 012095 370 FLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVALVP-GDA-FG----------- 435 (471)
Q Consensus 370 ~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p-g~~-f~----------- 435 (471)
++.+.|.+. |+.+..|.|++|+|++++...+ ....++ ++.+|+.+|+++.||.++- |+. ++
T Consensus 302 ~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~----~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~ 376 (431)
T cd00617 302 YLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHIPQEQF----PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYP 376 (431)
T ss_pred HHHHHHHHC-CCCccCCCcceEEEEEhHHhcCCCCcccC----cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCC
Confidence 899999998 9999999999999999875321 001111 6889999999999999654 441 11
Q ss_pred CCCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012095 436 DDTCIRISYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 436 ~~~~iRis~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
.-..+|+++.. +.++++...+.|..++++
T Consensus 377 ~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 377 ELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred ccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 02579999986 889999999999988865
No 112
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=3.9e-35 Score=297.55 Aligned_cols=336 Identities=18% Similarity=0.172 Sum_probs=256.1
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+++|+|+.|+ +++++++.+.+++.+++.+....|+ ...|..++++++++++++.+|. +++|++|+| ++++
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~~a~ 115 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-FDAN 115 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-HHHH
Confidence 688999999998 7888899999999998865323332 3468999999999999998883 478888888 6678
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcc
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTG 242 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG 242 (471)
..+++++++|||+|++++|+|+++...++..|++++.++. .|++.+++.+++ ++++|++.+.+||||
T Consensus 116 ~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G 188 (397)
T PRK06939 116 GGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDG 188 (397)
T ss_pred HHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCC
Confidence 8889999999999999999999999999999999888764 378888887753 567777777789999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC--ccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
...+ +++|.++|++| +++||+||+|....+.... ......+. .+.+++++||||.++ |+|+||+++++++
T Consensus 189 ~~~~---~~~l~~la~~~-~~~li~De~~~~g~~~~~~~~~~~~~~~~--~~~~i~~~S~sK~~~--g~r~G~v~~~~~~ 260 (397)
T PRK06939 189 DIAP---LPEICDLADKY-DALVMVDDSHAVGFVGENGRGTVEHFGVM--DRVDIITGTLGKALG--GASGGYTAGRKEV 260 (397)
T ss_pred CcCC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCCHHHHcCCC--CCCcEEEEECHHHhC--ccCceEEEeCHHH
Confidence 8776 89999999999 9999999999643222111 11122221 245799999999984 5699999999999
Q ss_pred HHHHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCC
Q 012095 321 VAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (471)
Q Consensus 321 i~~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~ 398 (471)
++.+......+ ..+.++..+.++.++++. .....+++++++++++++.+.|+++ |+++..+.++++.+ .++.
T Consensus 261 ~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~-~~~~ 334 (397)
T PRK06939 261 IDWLRQRSRPYLFSNSLAPAIVAASIKVLEL----LEESDELRDRLWENARYFREGMTAA-GFTLGPGEHPIIPV-MLGD 334 (397)
T ss_pred HHHHHHhCccccccCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCEEEE-EECC
Confidence 99887654322 222334445555666653 1223577889999999999999887 77776677776543 4443
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
. .++.+|++.|+++ ||.+.++. |.. .+++|++++. +++++++++++|++++++..
T Consensus 335 ~-----------~~~~~~~~~L~~~-gI~v~~~~-~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~~ 395 (397)
T PRK06939 335 A-----------KLAQEFADRLLEE-GVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKELG 395 (397)
T ss_pred H-----------HHHHHHHHHHHHC-CceEeeeC-CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 2 1467899999887 99998654 421 3589999864 88999999999999987754
No 113
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2.6e-35 Score=303.09 Aligned_cols=351 Identities=20% Similarity=0.278 Sum_probs=265.4
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHc-CC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~-~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+++|+|++|+ +.+..++.+++++.+++.+ +. ..|++..+..+|+++|++++ | .++.|++++|+
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~----~---~~~~i~~s~G~ 179 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFL----G---TPDSILYSYGL 179 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHh----C---CCCEEEECCHH
Confidence 578899999886 6888899999999999987 32 13555555777777777776 3 56789999988
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh--ccCC-cEEEEcCCCCCc
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKS-RLLILCSPSNPT 241 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l--~~~~-~~i~i~~p~NPt 241 (471)
+ ++..++.+++++||.|+++..+|.++...++..|.+++.++.+..+++..+++++++.. ++++ ++|+++.++|+|
T Consensus 180 ~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~ 258 (481)
T PLN02822 180 S-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNS 258 (481)
T ss_pred H-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCC
Confidence 8 46778999999999999998888888888899999999998763333333334333322 1334 688888999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc--ccccCCCCCCceEEEecCCcccCccchhheeeEcCHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT--SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~ 319 (471)
|.+.+ +++|+++|++| ++++|+||+|..+.++..+.. ....+.. .+..|+++||||.+|++| ||++++++
T Consensus 259 G~i~~---L~~i~~l~~k~-~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~-~~~dii~~s~sKalg~~G---G~i~g~~~ 330 (481)
T PLN02822 259 GQIAP---LDEIVRLKEKY-RFRVLLDESNSFGVLGKSGRGLSEHFGVPI-EKIDIITAAMGHALATEG---GFCTGSAR 330 (481)
T ss_pred CCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCChHHHcCCCC-CCCeEEEecchhhhhhCC---eEEEcCHH
Confidence 99999 89999999999 999999999998777632221 2222221 356799999999999999 99999999
Q ss_pred HHHHHHHHHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecC
Q 012095 320 FVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~ 397 (471)
+++.++.....+.++. ++..+.++.++|+. .+. ..++++.++++++++.+.|++++|+.+..+.+++++++.++
T Consensus 331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~---l~~-~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~ 406 (481)
T PLN02822 331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDV---LED-NPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLE 406 (481)
T ss_pred HHHHHHhcCCceeeccccCHHHHHHHHHHHHH---HHh-CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeC
Confidence 9998876555555554 47778888888864 122 35788899999999999999987888887888999999986
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC--CCCC---CCcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD--AFGD---DTCIRISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~--~f~~---~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+..+. ..+ ......+++++|++++||++.|+. .|+. +.++|++++ .++++|++++++|++++.+..
T Consensus 407 ~~~~~-~~~--~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 407 KSTGS-AKE--DLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred CCccc-ccc--hHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 42110 000 000136799999966799999873 3432 357999877 499999999999999988754
No 114
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=1.2e-34 Score=293.51 Aligned_cols=333 Identities=19% Similarity=0.212 Sum_probs=251.9
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCCCCC---CC----HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYTPNA---GT----LELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~~~~---G~----~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+++|+|+.|+ +++++++++++++.+++.+...+|++.. |. .+|++.+++++ | .+++++++|+
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~----g----~~~~ii~~~~ 107 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFL----G----TEDTILYASC 107 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----C----CCcEEEECch
Confidence 678899999999 5888899999999999876334677666 86 56666666665 3 2577888899
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 238 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~ 238 (471)
++++..++.+++++||+|++++|.|+++...++..+.+.+.++. +|++++++++++ ++++|++.+++
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~ 180 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEARAAGARHRLIATDGVF 180 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhhcCCCceEEEEeCCc
Confidence 99999999999999999999999999999999998888765531 689999988864 67788888899
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCccchhheeeEcC
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
||||.+.+ +++|+++|++| +++||+||+|....++.... ......+ ..+.+++++||||.+ +|+|+||++++
T Consensus 181 ~~tG~~~~---l~~i~~la~~~-~~~li~De~~~~g~~~~~~~-~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~ 253 (393)
T TIGR01822 181 SMDGVIAP---LDEICDLADKY-DALVMVDECHATGFLGPTGR-GSHELCGVMGRVDIITGTLGKAL--GGASGGFTTAR 253 (393)
T ss_pred cCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccCcCCCCC-chHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeC
Confidence 99999998 89999999999 99999999996433322111 1111111 124669999999986 57899999999
Q ss_pred HHHHHHHHHHHhccc--CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEe
Q 012095 318 KHFVAACNKIQSQFT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (471)
Q Consensus 318 ~~~i~~l~~~~~~~~--~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~ 395 (471)
+++++.+......+. .+.++..+.++.++|+. .+..++++++++++++++.+.|++. |+.+..+.+.+ +.+.
T Consensus 254 ~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~i~ 327 (393)
T TIGR01822 254 KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEM----LEASNELRDRLWANTRYFRERMEAA-GFDIKPADHPI-IPVM 327 (393)
T ss_pred HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEE
Confidence 999998876433222 22344555566666653 2335677889999999999999886 87776555554 4444
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--C--CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--D--DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~--~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++. .+..++++.|+++ ||.+. +..|. . ..++|++++. ++++|++++++|++++++++
T Consensus 328 ~~~~-----------~~~~~l~~~L~~~-gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~~ 391 (393)
T TIGR01822 328 LYDA-----------VLAQRFARRLLEE-GIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRELG 391 (393)
T ss_pred eCCH-----------HHHHHHHHHHHHC-CeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4432 1467899998877 99987 55443 1 2469988876 89999999999999987654
No 115
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=3.4e-34 Score=286.69 Aligned_cols=331 Identities=15% Similarity=0.158 Sum_probs=247.6
Q ss_pred hcCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFT---RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~~~~---~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+++|+|+.|+| +++.|+.+.+++.+++.+... .|....|..++...+.+.+.+++| .+++|++++|+.+.
T Consensus 13 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~G~~~~ 89 (360)
T TIGR00858 13 RDGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG---TEAALLFSSGYLAN 89 (360)
T ss_pred ECCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCCEEEECchHHHH
Confidence 46889999999964 344578899999988865222 222234554545555555554455 45788888886665
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCccc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGS 243 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~ 243 (471)
+ .++.+++++||+|++++|+|..+...++..|++++.++. +|++.+++.+++ ++++|++++++||||.
T Consensus 90 ~-~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~ 161 (360)
T TIGR00858 90 V-GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGD 161 (360)
T ss_pred H-HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCC
Confidence 5 467888899999999999999999999999999988763 588999988864 4678888999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc--cccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i 321 (471)
..+ +++|.++|+++ +++||+||+|..+.++.... .....+.. .+++|+++||||.||++| ||++++++++
T Consensus 162 ~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~sK~~~~~g---G~~~~~~~~~ 233 (360)
T TIGR00858 162 IAP---LPQLVALAERY-GAWLMVDDAHGTGVLGEDGRGTLEHFGLKP-EPVDIQVGTLSKALGSYG---AYVAGSQALI 233 (360)
T ss_pred CcC---HHHHHHHHHHc-CcEEEEECcccccCcCCCCCchHHhcCCCc-cCCcEEEEechhhhhccC---cEEEcCHHHH
Confidence 988 88999999999 99999999998766543211 12222222 467899999999999777 9999999999
Q ss_pred HHHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCc
Q 012095 322 AACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 399 (471)
Q Consensus 322 ~~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~ 399 (471)
+.+......+ ..+.++..+.++.++++. ..+..+++++++++++++.+.|+++ |+.+.++ +++++|+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~~ 307 (360)
T TIGR00858 234 DYLINRARTLIFSTALPPAVAAAALAALEL----IQEEPWRREKLLALIARLRAGLEAL-GFTLMPS-CTPIVPVIIGDN 307 (360)
T ss_pred HHHHHhCccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHHHHHHHHc-CCccCCC-CCCEEEEEeCCH
Confidence 9887554332 233455555566677763 2234567889999999999999987 7776644 555688888642
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHH
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.+..++.++|+++ ||.+.++..++. .+++|++++. +++++++++++|+
T Consensus 308 -----------~~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 308 -----------ASALALAEELQQQ-GIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred -----------HHHHHHHHHHHHC-CeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 1467899988765 999998776542 3589999996 8899999998763
No 116
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=6.5e-34 Score=287.46 Aligned_cols=337 Identities=20% Similarity=0.220 Sum_probs=258.5
Q ss_pred hcCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+++|+|+.|+ +++++++.+.+++.+++.+. ...|....|..++++.+++++++.+| .++++++++|++ +
T Consensus 30 ~~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g---~~~~i~~~sG~~-a 105 (385)
T TIGR01825 30 VNGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK---TEAALVFQSGFN-T 105 (385)
T ss_pred ECCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcHHH-H
Confidence 3578899999997 78888899999999888642 24577788999999999999999888 346788888854 5
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCccc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGS 243 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~ 243 (471)
+..++.+++++||.|++++|+|.++...+...|++++.++ .+|++++++.+.+ ++++|++++++||||.
T Consensus 106 ~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~ 178 (385)
T TIGR01825 106 NQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGD 178 (385)
T ss_pred HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCC
Confidence 6678888999999999999999999888888898887664 2688888887653 6788888888999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
+.+ +++|.++|++| ++++|+||+|..+.++.........+....++++++.||||.+|++| ||+++++++++.
T Consensus 179 ~~~---~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~ 251 (385)
T TIGR01825 179 VAP---LPEIVELAERY-GAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEY 251 (385)
T ss_pred ccC---HHHHHHHHHHh-CCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHH
Confidence 999 88999999999 99999999998766542211111112212467899999999998766 999999999999
Q ss_pred HHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 324 CNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 324 l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
+......+ ....+++.+.++.++++.. .++ .+..++++++++++.+.|+++ |+++..|.+++ +++.++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~~-- 323 (385)
T TIGR01825 252 LKNRARPFLFSTAQPPAVVAALAAAVDEL---QRS-PELMERLWDNTRFFKAGLGKL-GYDTGGSETPI-TPVVIGDE-- 323 (385)
T ss_pred HHHhCccccccCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEECCH--
Confidence 87654322 2234667777878877641 121 245677788899999999887 88887777765 44444421
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+..++++.|+++ ||.+. +..|+. .+++|++++ .+++++++++++|+++++++
T Consensus 324 ---------~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 324 ---------KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred ---------HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 1456899999887 99874 444432 268999876 39999999999999998754
No 117
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=265.67 Aligned_cols=362 Identities=17% Similarity=0.205 Sum_probs=280.4
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCC--CCCCC---hHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE--PDFDT---PVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~--~~~~~---p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (471)
+.+...++.++..+.+..+. +..++.|+|++|. ...+. -+.|.+|-...+.+ ....|.|..|.+++++.+++
T Consensus 3 ~~i~~~p~DpIlgL~e~f~~--D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ 80 (396)
T COG1448 3 EKIEAAPADPILGLKEAFKA--DPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK 80 (396)
T ss_pred cccccCCCCchhHHHHHHhc--CCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH
Confidence 45566677777777665443 3345799999997 33222 35566666555544 35689999999999999999
Q ss_pred HHHHHhCCC---CCCCcE--EEeCChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcC
Q 012095 144 KLKEENGLS---YTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (471)
Q Consensus 144 ~~~~~~g~~---~~~~~i--~it~G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~l 216 (471)
++ +|.+ ++.++| +-|.|+|.||......+. .|..+|++++|+|+++..++..+|.++..+|+....+..+
T Consensus 81 ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~ 157 (396)
T COG1448 81 LL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL 157 (396)
T ss_pred Hh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccc
Confidence 98 6754 444544 678999999998877663 4667899999999999999999999999999987777779
Q ss_pred CHHHHHhhhcc--CCcEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-CccccccCCCCCC
Q 012095 217 DPKVLESKLTE--KSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMWE 292 (471)
Q Consensus 217 d~e~l~~~l~~--~~~~i~i-~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~ 292 (471)
|.+.+.+.|+. ...+|++ .+.|||||..++.++|++|+++.++. +++.+.|-+|.+|.-+-. ....+..+.....
T Consensus 158 df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 158 DFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred cHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 99999998864 2234444 56699999999999999999999999 999999999998754321 1222222322234
Q ss_pred ceEEEecCCcccCccchhheeeEc---CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHH---HHHHHH
Q 012095 293 RTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVK 362 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~R~G~v~~---~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~---~~~~~~ 362 (471)
.++++.||||.||+.|-|+|.+.. +++ +..++..+.+...++|+..+..++...|+++.+..+| +..+++
T Consensus 237 ~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~ 316 (396)
T COG1448 237 ELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQ 316 (396)
T ss_pred cEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 489999999999999999998653 333 4455667777788889999999999999876554455 677899
Q ss_pred HHHHHHHHHHHHhcCC-CC--CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012095 363 AFRERRDFLVKSFGEL-EG--VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 439 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~-~g--~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~ 439 (471)
++.++|..+.+.|++. ++ +.++..+.|||.+..+ +.+-+.+|.+++||+++...
T Consensus 317 Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl----------------s~~QV~rLree~~IY~v~sG------- 373 (396)
T COG1448 317 RILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL----------------SPEQVDRLREEFGIYLVASG------- 373 (396)
T ss_pred HHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC----------------CHHHHHHHHHhccEEEecCC-------
Confidence 9999999999999983 23 7788889999988644 34556679999999998865
Q ss_pred EEEEeec-CHHHHHHHHHHHHHH
Q 012095 440 IRISYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 440 iRis~~~-~~e~i~~~~~~l~~~ 461 (471)
||+++. ++.+++...+.|.++
T Consensus 374 -Ri~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 374 -RINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred -eeeeccCChhhHHHHHHHHHhh
Confidence 999998 999999999988765
No 118
>PRK10534 L-threonine aldolase; Provisional
Probab=100.00 E-value=9.1e-34 Score=280.70 Aligned_cols=318 Identities=18% Similarity=0.229 Sum_probs=233.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~ 176 (471)
+|+|+++.++. +++.+++++.++. .+...|+|..+..+|+++|++++ | .+.+++++|+++++..++.+++
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~-~~~~~Y~~~~~~~~L~~~la~~~----g----~~~~~v~~~g~~a~~~~l~~~~ 70 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAP-VGDDVYGDDPTVNALQDYAAELS----G----KEAALFLPTGTQANLVALLSHC 70 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhcc-CCCcccCCCHHHHHHHHHHHHHh----C----CCeEEEeCchHHHHHHHHHHhc
Confidence 48999999888 7788989887654 34567988889999999999985 3 2345677778878887888889
Q ss_pred CCCCeEEEcCCCCCC-hHHH-HHHcC-CEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCH
Q 012095 177 SPGDEVIIPAPFWVS-YPEM-ARIAD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~-~~~~-~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~ 247 (471)
++||+|+++.|+|.. |... +...| ++++.++++ .+|.+|+++|++++++ ++++|++|||+ ||.+++.
T Consensus 71 ~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~ 146 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPR 146 (333)
T ss_pred CCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCH
Confidence 999999999888853 3321 33444 677888764 4578999999999876 58899999776 5999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhe-eeEcCHHHHHHHHH
Q 012095 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVAACNK 326 (471)
Q Consensus 248 ~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~~i~~l~~ 326 (471)
+++++|+++|++| +++|++||+|........ ......+....++++ .||||.||++ +| |+++++++++.+.+
T Consensus 147 ~~l~~i~~~~~~~-~~~lvvDEA~~~~~~~~~-~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~ 219 (333)
T PRK10534 147 EYLKQAWEFTRER-NLALHVDGARIFNAVVAY-GCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARR 219 (333)
T ss_pred HHHHHHHHHHHHc-CCeEEeeHHHHHHHHHHc-CCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHH
Confidence 9999999999999 999999999863211000 111112211113333 4899999864 67 68899999999998
Q ss_pred HHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcc
Q 012095 327 IQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEA 404 (471)
Q Consensus 327 ~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~ 404 (471)
+...+..+. +.+.|.++.++|++ .. +.++...++|+++.+.|+++ |+++.+| +++|+|++++..
T Consensus 220 ~~~~~~~~~~~~~~~~a~~~~~l~~------~~-~~~~~~~~~r~~l~~~L~~~-g~~~~~~-~~nfv~~~~~~~----- 285 (333)
T PRK10534 220 WRKMTGGGMRQAGILAAAGLYALKH------NV-ARLQEDHDNAAWLAEQLREA-GADVMRQ-DTNMLFVRVGEE----- 285 (333)
T ss_pred HHHHhCCchhhHHHHHHHHHHHHHh------hH-HHHHHHHHHHHHHHHHHHhC-CCccCCC-CceEEEEECCch-----
Confidence 876554333 34556666666642 12 22233445678999999998 8888777 477899998632
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHH
Q 012095 405 EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l~ 463 (471)
+..++.+.|.+ .||.+.||. ++|++.+ .+.+++++++++|++++.
T Consensus 286 -------~~~~~~~~l~~-~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 286 -------QAAALGEYMRE-RNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred -------hHHHHHHHHHH-cCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 45677766555 599999874 5788876 389999999999998764
No 119
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-34 Score=253.78 Aligned_cols=332 Identities=23% Similarity=0.303 Sum_probs=257.6
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
+.|++++.|..+++...|+|+-.+ --..| +..-..+++.+++.- .++++++|+++.|+.+.|..+
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q~e--------fk~~~-~d~rnk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~i 102 (375)
T KOG0633|consen 38 ALGRDIVKLDANENPRYPDPEQME--------FKYVY-PDPRNKRLSDALAQD------KPLTSDNICVGVGSDELIDLI 102 (375)
T ss_pred hcCCCceEeccccCCCCcCHHHcc--------ccccc-CCcccchhhhhcccC------CCCCccceEEecCcHHHHHHH
Confidence 358889999999866555443321 12345 444455666665543 357899999999999999999
Q ss_pred HHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEEcCCCCCcccCCCHH
Q 012095 172 VLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 172 ~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
+++.|.|| +.|+...|+|+.|.--+...+++++.+|+.+ +|.+|+|++.+.+. ..+|++++++|+||||..+..+
T Consensus 103 iR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~ 180 (375)
T KOG0633|consen 103 IRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKED 180 (375)
T ss_pred HhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccccHH
Confidence 99999999 8899999999999988899999999999976 68899999999885 3689999999999999999988
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
++++|.+-- .+.+|++||+|-+|.-.+ +-..+...+.|++++.+|||.||++|+|+||...+.++++.+.+.+
T Consensus 181 di~KiLe~p---~nglVVvDEAYidFsg~~----S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K 253 (375)
T KOG0633|consen 181 DILKILEMP---DNGLVVVDEAYIDFSGVE----SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK 253 (375)
T ss_pred HHHHHHhCC---CCcEEEEeeeeEeecccc----ccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc
Confidence 888887643 267888999999976422 2233344578999999999999999999999999999999999988
Q ss_pred hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCC
Q 012095 329 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGF 407 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~ 407 (471)
.+++ .+..+..+|.++|... ....++..++.+-+.|.++...|.+++++. +..+..+.|+.+++.+.-.
T Consensus 254 aPYN--iS~~~s~~AL~Als~~--n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n------ 323 (375)
T KOG0633|consen 254 APYN--ISVAGSVAALAALSDS--NGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN------ 323 (375)
T ss_pred CCcc--ccchhHHHHHHhcCcc--cchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc------
Confidence 8766 6788888899999853 246688888889999999999999988775 3344445568888864310
Q ss_pred CCCCCHHHHHHHHHHcCCEEEEC-CCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 408 GKIENSESLCRYLLDKAQVALVP-GDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 408 ~~~~~~~~l~~~Ll~~~gV~v~p-g~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
..+..+..+++.+.||.|+- |+..+..|++|++.+.++|+ .-.++-|+++
T Consensus 324 ---~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 324 ---GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred ---HHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 13456666677778998864 55566789999999986543 4445544443
No 120
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.1e-32 Score=276.33 Aligned_cols=334 Identities=19% Similarity=0.185 Sum_probs=248.2
Q ss_pred hcCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+++|+|+.|++ .+.+++.+++++.+++... ...|....|...+++.+++.+.+.+| .++.|++++| +++
T Consensus 36 ~~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~~g-~~~ 111 (385)
T PRK05958 36 VDGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFSSG-YAA 111 (385)
T ss_pred eCCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEECcH-HHH
Confidence 36889999999975 4556788999999988651 22233445666777777777777776 3455665555 455
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC---CcEEEEcCCCCCcccC
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSV 244 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~---~~~i~i~~p~NPtG~~ 244 (471)
+..+++.++++||.|++++|+|+.+...++..|++++.++. .|++.+++.+++. +.++++.+++||||..
T Consensus 112 ~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~ 184 (385)
T PRK05958 112 NLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDGDL 184 (385)
T ss_pred HHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCCCc
Confidence 66677888999999999999999999999999999988874 3889999988652 4455566789999998
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~ 322 (471)
.+ +++|+++|++| |++||+||+|..+.++.. .......+. ..++++++.||||.+|++| ||+++++++++
T Consensus 185 ~~---l~~i~~ia~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~ 256 (385)
T PRK05958 185 AP---LAELVALARRH-GAWLLVDEAHGTGVLGPQGRGLAAEAGLA-GEPDVILVGTLGKALGSSG---AAVLGSETLID 256 (385)
T ss_pred CC---HHHHHHHHHHh-CCEEEEECcccccccCCCCCchHHhhCCC-CCCceEEEEechhhcccCC---cEEEcCHHHHH
Confidence 88 89999999999 999999999986655421 111111232 2467899999999999777 99999999988
Q ss_pred HHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc
Q 012095 323 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~ 400 (471)
.+......+ ..+.+++.+.++.++|+.. ... ..+.+++.++++++.+.|+++ |+++.++.++| +|+.+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~aa~~aal~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~~~~~~~- 329 (385)
T PRK05958 257 YLINRARPFIFTTALPPAQAAAARAALRIL---RRE-PERRERLAALIARLRAGLRAL-GFQLMDSQSAI-QPLIVGDN- 329 (385)
T ss_pred HHHHhCccceecCCCCHHHHHHHHHHHHHH---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCH-
Confidence 876543222 2335555555666777641 222 567788999999999999987 77777676665 67777642
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
.++.++.++|.++ ||.+.++..+.. ++++|++++. +++++++++++|++++
T Consensus 330 ----------~~~~~~~~~l~~~-gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 330 ----------ERALALAAALQEQ-GFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred ----------HHHHHHHHHHHHC-CceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 1567899998765 999998655432 3689999984 8999999999998753
No 121
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=3.7e-32 Score=276.62 Aligned_cols=333 Identities=17% Similarity=0.183 Sum_probs=241.6
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCC-------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFT-------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~-------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
|++.++++.++ .++++++.+++++.+++..... .|+......+|++.++++ +| .++.|++++|+
T Consensus 45 ~~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~----~g---~~~~i~~~sG~- 116 (410)
T PRK13392 45 PRRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADL----HG---KESALLFTSGY- 116 (410)
T ss_pred CceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHH----hC---CCCEEEECcHH-
Confidence 45688888876 7888899999999998865211 121111234455555555 55 35678888875
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh----ccCCcEEEEcCCCC
Q 012095 166 QSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL----TEKSRLLILCSPSN 239 (471)
Q Consensus 166 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l----~~~~~~i~i~~p~N 239 (471)
+++..++..++ .+||.|+++...|.++...++..|+++..++.+ |.+.+++.+ .+++++|++++|+|
T Consensus 117 ~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~~~n 189 (410)
T PRK13392 117 VSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAFESVYS 189 (410)
T ss_pred HHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEEeCCCC
Confidence 55665666664 389989888888888888888899998776532 444454444 35788999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc-eEEEecCCcccCccchhheeeEcCH
Q 012095 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 240 PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
|||.+++ +++|.++|++| ++++|+||+|....+++.+. .+....+..++ .++++||||.||++| ||+++++
T Consensus 190 ~tG~~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~g~-g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~ 261 (410)
T PRK13392 190 MDGDIAP---IEAICDLADRY-NALTYVDEVHAVGLYGARGG-GIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASA 261 (410)
T ss_pred CCccccc---HHHHHHHHHHc-CCEEEEECCccccCcCCCCC-chhhhccCCCCCcEEEEEChHhhhccc---chhhcCH
Confidence 9999999 88999999999 99999999999655543221 11121111122 388999999999998 9999999
Q ss_pred HHHHHHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEec
Q 012095 319 HFVAACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (471)
Q Consensus 319 ~~i~~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~ 396 (471)
++++.+++....+ +.+.+++.+.++.++|+. .+.....++.++++++++.+.|+++ |+++.++.++|+ .+.+
T Consensus 262 ~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-~i~~ 335 (410)
T PRK13392 262 DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRH----LKTSQTERDAHQDRVAALKAKLNAN-GIPVMPSPSHIV-PVMV 335 (410)
T ss_pred HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCEE-EEEe
Confidence 9999888776543 444566788888888875 2333455677899999999999987 888877777764 3444
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.. .+..+++++|++++||.+.++..... ..++|+++.. ++++++++++.|.++++++.
T Consensus 336 ~~~-----------~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~~ 399 (410)
T PRK13392 336 GDP-----------TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRLE 399 (410)
T ss_pred CCH-----------HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 321 13568899888767999998764432 3689999974 89999999999999987653
No 122
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=1.8e-31 Score=270.91 Aligned_cols=333 Identities=19% Similarity=0.215 Sum_probs=247.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCC--CCC-------CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRY--TPN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y--~~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
+.+.|..+.-.. +|..+.+++.+.+.+...+. +.. ....++|+.++++ +|.. ++++|++|+|+++
T Consensus 19 ~~~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g~~-~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAATAL-KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQL----LNAP-DAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcccC-CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHH----cCCC-CCCEEEEECCHHH
Confidence 478888877653 56788899988776422111 010 1133455555555 4532 6789999999999
Q ss_pred HHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 167 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 167 al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
++..+++++ +++||+|++++|.|++ +...++..|++++.++.+. ++.+|++++++.++++++++++++|+
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~i~~~~ 170 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRILALGQMS 170 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEEEEeCCc
Confidence 999999987 3799999999999876 4456688899999999863 46789999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
||||.+++ +++|+++|+++ ++++|+|++|....+ ...+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 171 n~tG~~~~---~~~i~~l~~~~-g~~~ivD~a~~~g~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 236 (401)
T PRK10874 171 NVTGGCPD---LARAITLAHQA-GMVVMVDGAQGAVHF----PADVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKS 236 (401)
T ss_pred ccccCcCC---HHHHHHHHHHc-CCEEEEECCcccccc----cCCchh----cCCCEEEEecccccCCCc--cEEEEEch
Confidence 99999999 88999999999 999999999964222 112211 234588899999988666 69999999
Q ss_pred HHHHHHHHHH---------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 319 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 319 ~~i~~l~~~~---------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
++++.+..+. +....+++...+.++.++++.. .+.......++.++.++++.+.|++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l--~~~g~~~~~~~~~~l~~~l~~~l~~ 314 (401)
T PRK10874 237 ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWL--ADIDINQAESWSRSLATLAEDALAK 314 (401)
T ss_pred HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9888764221 1111245556666777766531 0222455677778889999999999
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEeec--C
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--S 447 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iRis~~~--~ 447 (471)
++|+.+..+..+.++++.+++. +..++.+.|.+ +||.+.+|..+ +..+++|+|++. +
T Consensus 315 ~~g~~~~~~~~~~i~~~~~~~~------------~~~~~~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt 381 (401)
T PRK10874 315 LPGFRSFRCQDSSLLAFDFAGV------------HHSDLVTLLAE-YGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT 381 (401)
T ss_pred CCCEEEeCCCCCcEEEEEECCc------------CHHHHHHHHHH-CCcEEeccccchHHHHHHhCCCCEEEEEecccCC
Confidence 8898877555555566677642 56788887755 59999998865 346899999997 8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012095 448 LTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~~ 465 (471)
+++++++++.|+++++.+
T Consensus 382 ~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 382 QSDVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999988764
No 123
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2e-31 Score=270.39 Aligned_cols=333 Identities=20% Similarity=0.211 Sum_probs=246.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCCC-------CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAG-------TLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~--~~~Y~~~~G-------~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
+.+.|..+.-.. +|+.+.+++.+.+... ..++++..+ ..++|+.+++++ |.. ++++|++|+|+++
T Consensus 16 ~~iyld~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----g~~-~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAATAL-KPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAP-DAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCChHH
Confidence 478888887663 5778899988877532 122222211 334666666665 432 4689999999999
Q ss_pred HHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 167 SILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 167 al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
++..++.++ +++||+|++++|.|++ +...++..|++++.++++. ++.+|+++++++++++++++++++|+
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv~i~~~~ 167 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRILALGQMS 167 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEEEEECcc
Confidence 999999887 4789999999999876 3456788999999999864 35689999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
||||.+++ +++|+++|+++ ++++++|++|....+ ...+.. .+..+++.|++|.+|.+| +||+++++
T Consensus 168 n~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~gp~G--~G~l~~~~ 233 (398)
T TIGR03392 168 NVTGGCPD---LARAITLAHQY-GAVVVVDGAQGVVHG----PPDVQA----LDIDFYAFSGHKLYGPTG--IGVLYGKT 233 (398)
T ss_pred ccccccCC---HHHHHHHHHHc-CCEEEEEhhhhcCCC----CCChhh----cCCCEEEEecccccCCCc--eEEEEEcH
Confidence 99999999 88899999999 999999999975322 112211 234477888889998666 89999999
Q ss_pred HHHHHHHHHH---------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 319 HFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 319 ~~i~~l~~~~---------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
++++.+.... +....+++.....++.++++.- .+...+++.++.++.++++.+.|.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l--~~~g~~~i~~~~~~l~~~l~~~l~~ 311 (398)
T TIGR03392 234 ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWL--TDIDIAAAEAWSVSLADLAEERLAQ 311 (398)
T ss_pred HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 9887764221 0011234555666666666531 1223456777788889999999999
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEeec--C
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--S 447 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iRis~~~--~ 447 (471)
++|+.+..+..++++++.+++. +..++.+.|.+ +||.+.+|..+ +.+++||+|++. +
T Consensus 312 l~g~~~~~~~~~~i~~~~~~~~------------~~~~l~~~L~~-~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t 378 (398)
T TIGR03392 312 LPGFRSFRCPGSSLLAFDFAGV------------HHSDLAALLAE-SGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT 378 (398)
T ss_pred CCCeEEeCCCCCcEEEEEeCCc------------CHHHHHHHHHh-CCEEEecCccchHHHHHHhCCCCEEEEEeeccCC
Confidence 8898876544455566666642 56788888765 59999999855 335799999986 8
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012095 448 LTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~~ 465 (471)
++|++++++.|+++++++
T Consensus 379 ~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 379 QQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 899999999999988764
No 124
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=272.29 Aligned_cols=338 Identities=17% Similarity=0.201 Sum_probs=247.3
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|..+||+..|.+ .+++ ++.+.+++.+++.... +....+..++++.+++++.+..| .+++++++|+++++.
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA~~ 110 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLI--HTSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEANE 110 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcc--ccccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHHHH
Confidence 6788999999864 4555 5889999999886532 11223346889999999987754 379999999999999
Q ss_pred HHHHHhcCCC-------CeEEEcCCCCCChHHHHHHcCCEEE----EecCCCCCCC----cCCHHHHHhhhccCCcEEEE
Q 012095 170 QAVLAVCSPG-------DEVIIPAPFWVSYPEMARIADATPV----ILPTRISENF----LLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 170 ~~~~~l~~~g-------d~Vlv~~p~y~~~~~~~~~~G~~~~----~v~~~~~~~~----~ld~e~l~~~l~~~~~~i~i 234 (471)
.+++.+...+ +.|++.+++|.++.......+.... ..++. .++ ..|++++++++.+++++|++
T Consensus 111 ~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~vii 188 (396)
T PRK02627 111 AAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAVML 188 (396)
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEEEE
Confidence 9999765433 6799999999988766555443221 11211 121 12899999999888999999
Q ss_pred cCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 235 CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 235 ~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+.++||+| .+++++.+++|.++|++| +++||+||+|.++.+.+. ...+.... .... +.||||.++ +|+|+||
T Consensus 189 ~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DE~~~g~g~~g~-~~~~~~~~-~~pd---i~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 189 EPIQGEGGVNPADKEYLQALRELCDEN-GILLILDEVQTGMGRTGK-LFAYQHYG-IEPD---IMTLAKGLG-GGVPIGA 261 (396)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhcCCCccCc-eeeehhcC-CCCC---EEEEcchhh-CCcccEE
Confidence 88899999 789999999999999999 999999999998765542 11211111 1122 347999999 9999999
Q ss_pred eEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEe
Q 012095 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 393 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~ 393 (471)
+++++++++.+.......+++.+++.|.++.++|+.... .++.+..++..+..++.+.+.+.+.+.+.... ..|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~ 339 (396)
T PRK02627 262 VLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEE-EGLLENAAEVGEYLRAKLRELLEKYPGIKEVR-GLGLMIG 339 (396)
T ss_pred EEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHHhCCCeeeec-cCcEEEE
Confidence 999999998886554556778999999999999975221 23444444444444454544444443333333 3467788
Q ss_pred EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
+.++. +..++++.|+++ ||.+.|+. .+++|++++ .+++++++++++|+++++++
T Consensus 340 i~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 340 IELDR-------------PAAEIVKKALEK-GLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred EEecC-------------cHHHHHHHHHHC-CeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 88732 578899999887 99999964 368999875 48999999999999998765
No 125
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=1.7e-31 Score=275.45 Aligned_cols=336 Identities=18% Similarity=0.194 Sum_probs=239.1
Q ss_pred CCCeEEcCCCC-CCCCC-----hHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 94 GVSVIRLAAGE-PDFDT-----PVLIAEAGINAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~-----p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
+++.++|++++ ..+.. ++.+.+++.+.... ....|+...+..+|++.++++++ .++.|++++|.
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~~G~ 171 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFGMGY 171 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEECCHH
Confidence 45789999887 55542 24455554443211 12337667777888888888864 46788888876
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-------cCC-----cEE
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-------EKS-----RLL 232 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-------~~~-----~~i 232 (471)
...+ .++.+++++||.|++++|+|+++...++..|++++.++.+ |.+++++.++ +++ +++
T Consensus 172 ~an~-~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~l 243 (489)
T PLN02483 172 ATNS-TIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKII 243 (489)
T ss_pred HHHH-HHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEE
Confidence 6554 5778899999999999999999999999999999999863 4455555442 222 556
Q ss_pred EEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC--CCccccccCCCCCCceEEEecCCcccCccch
Q 012095 233 ILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 233 ~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
+++++ .|++|...+ +++|+++|++| +++||+||+|....++. .....+..+.. .+.+|+++||||+||++|
T Consensus 244 ivve~v~s~~G~~~~---l~~I~~la~~~-~~~livDEa~s~g~~G~~G~g~~~~~~v~~-~~~dI~~~SfSKs~g~~G- 317 (489)
T PLN02483 244 VIVEGIYSMEGELCK---LPEIVAVCKKY-KAYVYLDEAHSIGAVGKTGRGVCELLGVDP-ADVDIMMGTFTKSFGSCG- 317 (489)
T ss_pred EEECCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECcCccCccCCCCCchHHhcCCCc-ccCcEEEEecchhcccCc-
Confidence 65554 699999998 99999999999 99999999998544332 12222333322 467899999999999888
Q ss_pred hheeeEcCHHHHHHHHHHHhcc--cCCCChHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 310 RLGYIAGPKHFVAACNKIQSQF--TSGASSISQKAGVAALGL--GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~~~~~~--~~~~~~~~q~aa~~~L~~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
||+++++++++.+....... ..+.++....++.++|+. .....++..+.+++++++++++.+.|.++ |+.+..
T Consensus 318 --G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~ 394 (489)
T PLN02483 318 --GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLG 394 (489)
T ss_pred --eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 99999999999998764322 222233333334555531 00012445566889999999999999998 888776
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC-CC---CCcEEEEeec--CHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-GD---DTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f-~~---~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
+.+++.+|+.+... .+..++++.|+++ ||.++| ..| .. .+++|++++. ++|+|++++++|+
T Consensus 395 ~~~sp~~~l~l~~~-----------~~~~~~~~~Ll~~-GI~v~~-~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~ 461 (489)
T PLN02483 395 DNDSPVMPIMLYNP-----------AKIPAFSRECLKQ-NVAVVV-VGFPATPLLLARARICISASHSREDLIKALEVIS 461 (489)
T ss_pred CCCCCEEEEEECCH-----------HHHHHHHHHHHHC-CcEEee-eCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 66666677665432 1456799998876 999997 444 22 3689999875 8999999999999
Q ss_pred HHHHhhC
Q 012095 460 KGLLTLR 466 (471)
Q Consensus 460 ~~l~~~~ 466 (471)
++++.+.
T Consensus 462 ~~~~~~~ 468 (489)
T PLN02483 462 EVGDLVG 468 (489)
T ss_pred HHHHHhC
Confidence 9987643
No 126
>PLN02721 threonine aldolase
Probab=100.00 E-value=2e-31 Score=266.06 Aligned_cols=328 Identities=19% Similarity=0.291 Sum_probs=230.1
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINA-IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
+++|+.|.++. +++.+.+++.+. .......| .....+|+++++++++ .+.+++++++++++..++.++
T Consensus 7 ~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~--~~~~~~l~~~la~~~~--------~~~~~~~~~Gs~a~~~~l~~~ 75 (353)
T PLN02721 7 VVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGY--DPTALRLEEEMAKIFG--------KEAALFVPSGTMGNLISVLVH 75 (353)
T ss_pred hhhhhcccccC-CCHHHHHHHHhccCCCcccCC--CHHHHHHHHHHHHHhC--------CceeEEecCccHHHHHHHHHH
Confidence 68999999986 567788887754 22223334 3347899999999974 123455555555566777777
Q ss_pred cC-CCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-------cCCcEEEEcC-CCCCccc
Q 012095 176 CS-PGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLT-------EKSRLLILCS-PSNPTGS 243 (471)
Q Consensus 176 ~~-~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-------~~~~~i~i~~-p~NPtG~ 243 (471)
++ +||+|++++|+|..... .+...|++++.+|.+ .++.+|++.++++++ +++++|++++ ++||||.
T Consensus 76 ~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~ 153 (353)
T PLN02721 76 CDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGR 153 (353)
T ss_pred ccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCc
Confidence 77 99999999999865544 577889999999875 346689999999997 5789999976 5789999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee-eEcCHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVA 322 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~-v~~~~~~i~ 322 (471)
+++.+++++|.++|++| |++||+||+|........ ......+....+ .++.||||.++. ++|| +++++++++
T Consensus 154 ~~~~~~l~~l~~l~~~~-g~~livD~a~~~~~~~~~-~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~ 226 (353)
T PLN02721 154 CLSVEYTDKVGELAKRH-GLKLHIDGARIFNASVAL-GVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIR 226 (353)
T ss_pred cccHHHHHHHHHHHHHc-CCEEEEEchhhhcchhhh-CCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHH
Confidence 99999999999999999 999999999853211000 011111111122 445579999873 3576 678999999
Q ss_pred HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee--eCCCcceEEeEecCCcc
Q 012095 323 ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--SEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 323 ~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~--~~p~~g~~~~~~~~~~~ 400 (471)
.+.........+++...+.++..... .+++++.+.+ ..++++.+.+.|++++|+.+ .+|.++ |+|++++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~-~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~ 300 (353)
T PLN02721 227 KAKRLRKTLGGGMRQVGVLAAAALVA----LQENVPKLED-DHKKAKLLAEGLNQIKGLRVNVAAVETN-IVYFDITDGS 300 (353)
T ss_pred hHHHHHHhcCCCeehhHHHHHHHHHH----HHHHHHHHHH-HHHHHHHHHHHHHhCCCcEEecCCccce-EEEEEccCCc
Confidence 88777655443344443333322222 1344444333 35677899999998878744 445554 5898887420
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
+ .+..+++++|.+ +||.+.|+. ++++|++++. +++++++++++|++++..
T Consensus 301 ~---------~~~~~~~~~L~~-~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 301 R---------ITAEKLCKSLEE-HGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred c---------ccHHHHHHHHHh-CCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 0 157789999875 599999974 4689999973 889999999999988753
No 127
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=8.6e-31 Score=261.05 Aligned_cols=330 Identities=19% Similarity=0.205 Sum_probs=241.2
Q ss_pred CeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~---Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
++++|+.++ ...+.|+++.+++.+++.+...+ |....|..++.+.+.+.+.+.+|. ++. ++++++++++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~-iv~~sg~~a~~~~ 77 (349)
T cd06454 2 KVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK---EAA-LVFSSGYAANDGV 77 (349)
T ss_pred CceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC---CCE-EEeccHHHHHHHH
Confidence 467888777 55555789999999998753222 222335556666666666666663 234 5555556788878
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----CCcEEEEcCCCCCcccCCC
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~~~~i~i~~p~NPtG~~~~ 246 (471)
+++++++||.|++++|+|.++...++..|++++.++. +|++.+++.+++ +++++++++|+||||...+
T Consensus 78 ~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 78 LSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred HHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 8888999999999999999999889999999988762 477888888753 4677778999999999988
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+++|+++|++| ++++|+|++|....+..... ...... ...+.+++++|+||.++++| ||+++++++++.+.
T Consensus 151 ---~~~i~~~~~~~-~~~livD~a~~~g~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~ 222 (349)
T cd06454 151 ---LPELVDLAKKY-GAILFVDEAHSVGVYGPHGRGVEEFGG-LTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLR 222 (349)
T ss_pred ---HHHHHHHHHHc-CCEEEEEccccccccCCCCCChhhhcc-ccccCcEEEeechhhhcccC---CEEECCHHHHHHHH
Confidence 88999999999 99999999997543322111 111111 22467899999999998655 99999999988877
Q ss_pred HHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCc
Q 012095 326 KIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (471)
Q Consensus 326 ~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~ 403 (471)
.....+ ....++..+.++.++|+.. .+ .+..+++++++++.+.+.|.++ |+.+..+.++++.++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~-~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~---- 293 (349)
T cd06454 223 SYARGFIFSTSLPPAVAAAALAALEVL---QG-GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP---- 293 (349)
T ss_pred HhchhhhccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh----
Confidence 654332 2345666777777777641 22 4667888999999999999887 77776665666555544421
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 404 AEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 404 ~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~---~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
.+..++.+.|.++ ||.+.++.... ..+++|++++. +++++++++++|+++
T Consensus 294 -------~~~~~~~~~L~~~-gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 294 -------AKAVAFSDALLER-GIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -------HHHHHHHHHHHhC-CceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1567899998877 99998864321 13689999985 899999999999764
No 128
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=100.00 E-value=4.2e-31 Score=265.03 Aligned_cols=297 Identities=13% Similarity=0.151 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 214 (471)
.++++.++++ +|. +.+++++|+++++..++.+++++||.|+++.+.|.+....++..|++++.++.+.+.+|
T Consensus 54 ~~~~e~lA~~----~g~----~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~ 125 (370)
T TIGR02539 54 HDFLEDLAEF----LGM----DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEY 125 (370)
T ss_pred HHHHHHHHHH----hCC----CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccC
Confidence 4455555555 443 46777999999999999999999999999988866666788999999999998765678
Q ss_pred cCCHHHHHhhhcc-------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC
Q 012095 215 LLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (471)
Q Consensus 215 ~ld~e~l~~~l~~-------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (471)
.+|+++|++++++ ++++|++++|+||||...+ +++|+++|+++ ++++|+||+|...... .....
T Consensus 126 ~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~-~~~livDea~~~g~~~----~~~~~- 196 (370)
T TIGR02539 126 KVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREK-GVPLLLNCAYTVGRMP----VSAKE- 196 (370)
T ss_pred CcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHc-CCeEEEECccccCCcC----CCHHH-
Confidence 8999999999853 6789999999999999999 88899999999 9999999999863211 11111
Q ss_pred CCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC--------CCChHHHHHHHHHHhccCCChHHHHH
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS--------GASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~--------~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.+..++++||||+++ +|.|+||+++++++++.+.....++.. ......+.++.+++.. ..++++.
T Consensus 197 ---~~~di~v~s~sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~l~~ 269 (370)
T TIGR02539 197 ---IGADFIVGSGHKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH---VVERVKR 269 (370)
T ss_pred ---cCCCEEEeeCccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH---HHHHHHH
Confidence 234577899999998 577899999999999998876654332 1222245555556653 2455555
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCeee--CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEE-EECCCCCCC
Q 012095 360 MVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-LVPGDAFGD 436 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~-v~pg~~f~~ 436 (471)
..+.++.. +++.+.|.++ |+++. .|..+.|+++++|.. .....+ ...+...+.+.|.++ ||. +.+ +.
T Consensus 270 ~~~~~~~~-~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~-~~~~~~--~~~~~~~~~~~L~e~-GI~~ir~----~~ 339 (370)
T TIGR02539 270 WDEEVKKT-RWFVAELEDI-GFIQLGQKPKEHDLVKFETPGF-HEIAQK--HKRRGYFLYEELKKR-GIHGIRS----GQ 339 (370)
T ss_pred HHHHHHHH-HHHHHHHHhC-CcEEEccCCCcCceEEEECCch-hHHhhh--hccccHHHHHHHHhC-CCccccC----Cc
Confidence 55555554 5899999998 88753 355677788887631 000000 001345688888766 996 554 33
Q ss_pred CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 437 DTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 ~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
++++|+++.. +.++++++++.|+++++++
T Consensus 340 ~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 340 TKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 5799999633 8999999999999988763
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=6.9e-31 Score=264.80 Aligned_cols=332 Identities=15% Similarity=0.174 Sum_probs=239.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++|||..|. ..++. ++.+.+++.+++.+.... ...+..+.++.+++.+.+.+|. +++++++|+++++.
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~g~----~~~~~~~sg~~a~~ 98 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV--SNLYYTEPQEELAEKLVEHSGA----DRVFFCNSGAEANE 98 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccc--ccccCCHHHHHHHHHHHhhCCC----CEEEEeCCcHHHHH
Confidence 577899999974 34444 589999999888753211 1112245666777777766663 49999999999999
Q ss_pred HHHHHhc---C----CCCeEEEcCCCCCChHHHHHHcCCEEEE----ecCCCCCCCcC--CHHHHHhhhccCCcEEEEcC
Q 012095 170 QAVLAVC---S----PGDEVIIPAPFWVSYPEMARIADATPVI----LPTRISENFLL--DPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 170 ~~~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~~G~~~~~----v~~~~~~~~~l--d~e~l~~~l~~~~~~i~i~~ 236 (471)
.+++++. . +||+|++++|+|+.+...+...++.... .++..+..+.. |++.+++.+++++++|+++.
T Consensus 99 ~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p 178 (379)
T TIGR00707 99 AALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEP 178 (379)
T ss_pred HHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEc
Confidence 8888652 2 3799999999999988777766654322 23322222211 89999999988899999976
Q ss_pred CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE
Q 012095 237 PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
++||+|. .++.+++++|.++|++| ++++|+||+|.++.+.+.. .++... +...++ .+|||.++ +|+|+||++
T Consensus 179 ~~~~~g~~~~~~~~l~~i~~l~~~~-~~~~i~De~~~~~~~~g~~-~~~~~~-~~~~d~---~t~sK~~~-~G~riG~~~ 251 (379)
T TIGR00707 179 IQGEGGVNPASAEFLKALREICKDK-DALLIFDEVQTGIGRTGKF-FAYEHY-GIEPDI---ITLAKGLG-GGVPIGATL 251 (379)
T ss_pred cccCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchh-hhHHhc-CCCCCE---EEEccccc-CCcccEEEE
Confidence 6778886 47999999999999999 9999999999987554421 111111 112222 36899999 999999999
Q ss_pred cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC---CCCeeeCCCcceEE
Q 012095 316 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGAFYL 392 (471)
Q Consensus 316 ~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~~~p~~g~~~ 392 (471)
+++++++.+........++.++++|.++.++|+.. + ..+..++++++++.+.+.|.++ .++... +..|.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~---~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~g~~~ 325 (379)
T TIGR00707 252 AKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVI---E--KERLLENVKEKGDYFKERLEELGKNYPNKEV-RGKGLML 325 (379)
T ss_pred EcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---H--hhhHHHHHHHHHHHHHHHHHHHHhhCCCCcc-ccCceEE
Confidence 99999998876544556678999999999998741 1 1245566777777777776653 122222 2356678
Q ss_pred eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
|+.++. +..++++.|.++ ||.+.|+. .+++|++++. +++++++++++|+++
T Consensus 326 ~~~~~~-------------~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 326 GIELEA-------------PCKDIVKKALEK-GLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred EEEecC-------------cHHHHHHHHHHC-CcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 888763 457888887765 99999853 4789999754 899999999999875
No 130
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=1.7e-30 Score=263.78 Aligned_cols=338 Identities=17% Similarity=0.159 Sum_probs=242.9
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
|+++++|+.++ ..+..+|.+++++.+++.+...+.+ ...|..+....+++.+.+.+| .++.++ ++++++++.
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~~~l~-~~sG~~an~ 119 (402)
T TIGR01821 44 AKDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KESALV-FTSGYVAND 119 (402)
T ss_pred CeeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CCeEEE-ECchHHHHH
Confidence 46789999887 8888899999999999876222111 112434445555555555555 234444 454577777
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCccc
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGS 243 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~ 243 (471)
.++..+.. +|+.|+.....|......++..|++++.++. .|++++++.++ +++++|++++|+||||.
T Consensus 120 ~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~ 192 (402)
T TIGR01821 120 ATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGD 192 (402)
T ss_pred HHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCC
Confidence 78887765 6777777766777777777888888766653 26677777664 25788999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
+.+ +++|.++|++| ++++|+||+|....+++.............+..++++||||.+|++| ||+++++++++.
T Consensus 193 ~~~---l~~i~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~ 265 (402)
T TIGR01821 193 IAP---IEEICDLADKY-GALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDA 265 (402)
T ss_pred ccC---HHHHHHHHHHc-CCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHH
Confidence 999 89999999999 99999999998555543222111111111234688999999999888 999999999999
Q ss_pred HHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
+...... ++.+.++..+.++.++|+.. ++. ...++.++++++++.+.|+++ |+++.++.+++ +++.++..
T Consensus 266 l~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-~~i~~~~~-- 337 (402)
T TIGR01821 266 IRSYAPGFIFTTSLPPAIAAGATASIRHL---KES-QDLRRAHQENVKRLKNLLEAL-GIPVIPNPSHI-VPVIIGDA-- 337 (402)
T ss_pred HHHhCcCceecCcCCHHHHHHHHHHHHHh---hcC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEEeCCH--
Confidence 8765443 24457777888888888752 222 455666778899999999887 88877777665 45555421
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
....++.+.|++++||.+.+...+.. .+++|+++.. ++++++++++.|+++++++.
T Consensus 338 ---------~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 398 (402)
T TIGR01821 338 ---------ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRLG 398 (402)
T ss_pred ---------HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 13567888888777999988654432 2689999975 89999999999999988764
No 131
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=3.4e-30 Score=261.87 Aligned_cols=335 Identities=19% Similarity=0.242 Sum_probs=246.6
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCC--CCC-------CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR--YTP-------NAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~--Y~~-------~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
.|++++.|..|... ++|+.+.+++.+.+.+...+ .+. ..+..++|+.+++++ |.+ .+++|++|+|
T Consensus 15 ~~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~----~~~-~~~~v~~~~g 88 (403)
T TIGR01979 15 NGKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI----NAA-SDEEIVFTRG 88 (403)
T ss_pred CCCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCC
Confidence 36678999999977 35677888888776542111 000 013446777777765 432 2579999999
Q ss_pred hHHHHHHHHHHh----cCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc
Q 012095 164 AKQSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 164 ~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
+++++..++.++ +++||+|+++++.|++. ...++..|++++.++++ .++.+|++.+++++++++++|+++
T Consensus 89 ~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~lv~~~ 166 (403)
T TIGR01979 89 TTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKLVAIT 166 (403)
T ss_pred HHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeEEEEE
Confidence 999999888875 57899999999988764 34566789999999987 345689999999999999999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE
Q 012095 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 236 ~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
+|+||||..++ +++|.++|++| |+++|+|++|... .....+.. .+..+++.|++|.+|.+| +||++
T Consensus 167 ~~~~~tG~~~~---~~~i~~~~~~~-~~~~ivD~a~~~g----~~~~~~~~----~~~d~~~~s~~K~~gp~G--~g~l~ 232 (403)
T TIGR01979 167 HVSNVLGTVNP---VEEIAKLAHQV-GAKVLVDGAQAVP----HMPVDVQA----LDCDFYVFSGHKMYGPTG--IGVLY 232 (403)
T ss_pred cccccccccCC---HHHHHHHHHHc-CCEEEEEchhhcC----ccccCccc----cCCCEEEEecccccCCCC--ceEEE
Confidence 99999999999 88999999999 9999999999752 11112211 345689999999988666 99999
Q ss_pred cCHHHHHHHHHHH---------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 316 GPKHFVAACNKIQ---------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 316 ~~~~~i~~l~~~~---------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+++++++.+.... +....+++.....++.++++.. .+...+...++..+.++++.+.
T Consensus 233 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~--~~~g~~~~~~~~~~l~~~l~~~ 310 (403)
T TIGR01979 233 GKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYL--EAIGLENIEAHEHELTAYALER 310 (403)
T ss_pred EchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHH
Confidence 9988877653110 0011234555566666666531 0122567788888999999999
Q ss_pred hcCCCCCeeeCCC-----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC--------CCCCCCcEE
Q 012095 375 FGELEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD--------AFGDDTCIR 441 (471)
Q Consensus 375 L~~~~g~~~~~p~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~--------~f~~~~~iR 441 (471)
|++++|+++..|. +++ +.+.+++. +..++.+.|. +.||.+.+|. .++.++++|
T Consensus 311 l~~~~g~~~~~~~~~~~~~~~-v~~~~~~~------------~~~~~~~~L~-~~gI~v~~g~~~~~~~~~~~~~~~~iR 376 (403)
T TIGR01979 311 LGEIPGLRIYGPRDAEDRGGI-ISFNVEGV------------HPHDVGTILD-EEGIAVRSGHHCAQPLMRRFGVPATCR 376 (403)
T ss_pred HhcCCCEEEeCCCCccccCce-EEEEeCCc------------CHHHHHHHHh-hCCEEEcchhhhhHHHHHHhCCCCEEE
Confidence 9988889887654 455 44566542 5667777655 5699999876 344568999
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+|++. +++|++++++.|+++++.+
T Consensus 377 iS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 377 ASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 99996 8899999999999987765
No 132
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=2.9e-30 Score=262.58 Aligned_cols=338 Identities=19% Similarity=0.202 Sum_probs=242.2
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
|+++++|++++ ..+++++.+++++.+++.+...+++ ...|..+..+.+++.+.+.+| .++.+++++|+ ++..
T Consensus 45 ~~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g---~~~~~~~~sG~-~an~ 120 (407)
T PRK09064 45 EREVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG---KEAALVFTSGY-VSND 120 (407)
T ss_pred CceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC---CCcEEEECcHH-HHHH
Confidence 46799999887 7888889999999998865222111 112334445555555555555 34566666665 4555
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCccc
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGS 243 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~ 243 (471)
.++..++. +++.|+.....|.+....++..|+++..++. .|++.+++.++ +++++|++++|+||+|.
T Consensus 121 ~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~ 193 (407)
T PRK09064 121 ATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFESVYSMDGD 193 (407)
T ss_pred HHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcc
Confidence 56666554 7777777777777776777888888766653 27777777764 46789999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCccchhheeeEcCHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~ 322 (471)
+.+ +++|.++|++| +++||+||+|....+++.+. .+....+ ..+..++++||||.||++| ||+++++++++
T Consensus 194 ~~~---l~~i~~l~~~~-~~~livDEa~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~ 265 (407)
T PRK09064 194 IAP---IAEICDLADKY-NALTYLDEVHAVGMYGPRGG-GIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVD 265 (407)
T ss_pred ccC---HHHHHHHHHHc-CCEEEEECCCcccccCCCCC-ChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHH
Confidence 999 99999999999 99999999998544543221 1212111 1234788999999999888 99999999999
Q ss_pred HHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc
Q 012095 323 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~ 400 (471)
.+......+ +.+.++..+.++.++|+.. +. ....+++++++++++.+.|.++ |+++.++.+++ +++.++..
T Consensus 266 ~l~~~~~~~~~t~~~~~~~~~aa~~al~~~---~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i-v~i~~~~~- 338 (407)
T PRK09064 266 AVRSYAPGFIFTTSLPPAIAAAALASIRHL---KE-SNEERERHQERAAKLKAALDAA-GIPVMPNESHI-VPVMVGDP- 338 (407)
T ss_pred HHHHhCccccccCcCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCCCE-EEEEeCCH-
Confidence 887654433 3456777777777777641 11 2344677889999999999987 88777666554 56666431
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
....++.++|++++||.+.+...+..+ +++|++++. ++++++++++.|+++++++..
T Consensus 339 ----------~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~~~ 400 (407)
T PRK09064 339 ----------EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARLGL 400 (407)
T ss_pred ----------HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 146788998887779999987654432 689999885 889999999999999887643
No 133
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.8e-30 Score=261.08 Aligned_cols=336 Identities=15% Similarity=0.185 Sum_probs=240.9
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|. ..++. ++.+.+++.+++.+... ++. ....+....+++.+.+.. ..+++++++|+++++.
T Consensus 29 dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGseA~~ 102 (389)
T PRK01278 29 DGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH-VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGAEAVE 102 (389)
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCc-ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcHHHHH
Confidence 578899998875 33343 78999999998875221 111 123345556666665443 2369999999999999
Q ss_pred HHHHHh----cCCCC----eEEEcCCCCCChHHHHHHcCCEEEEecCC-C-CCCCc----CCHHHHHhhhccCCcEEEEc
Q 012095 170 QAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADATPVILPTR-I-SENFL----LDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 170 ~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~-~~~~~----ld~e~l~~~l~~~~~~i~i~ 235 (471)
.+++++ .++|| +|++.+++|+++...+...+......... + ..++. .|++.+++++++++++|+++
T Consensus 103 ~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avive 182 (389)
T PRK01278 103 CAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIE 182 (389)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEe
Confidence 998876 45676 89999999999887766655543332110 0 11222 58999999998889999998
Q ss_pred CCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc-ccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 236 SPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 236 ~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
.++||+| .+++.+++++|.++|++| |+++|+||+|.++.+.+.... ....+.. + +.||||.++ +|+|+||
T Consensus 183 p~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~~~~~~~~p--d----i~t~sK~l~-~G~~ig~ 254 (389)
T PRK01278 183 PIQGEGGIRPAPDEFLKGLRQLCDEN-GLLLIFDEVQCGMGRTGKLFAHEWAGVTP--D----IMAVAKGIG-GGFPLGA 254 (389)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCcceeecccCCCC--C----EEEEehhcc-CCcceEE
Confidence 7889999 789999999999999999 999999999998755443111 1112211 1 458999998 9999999
Q ss_pred eEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC--ChHHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCCCcce
Q 012095 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSEPQGAF 390 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~g-~~~~~p~~g~ 390 (471)
+++++++++.+.......+++.+++.|.++.++|+.-.. ..+++.++.+.++++.+.+.+ +.++ +....+ .|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~---~~~~~~~~v~g-~G~ 330 (389)
T PRK01278 255 CLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD---RFPDVIEEVRG-KGL 330 (389)
T ss_pred EEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh---hCCCceeeEec-ccE
Confidence 999999998887666667788999999999888864110 123344445555555544432 2332 233334 466
Q ss_pred EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHh
Q 012095 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~ 464 (471)
++++.++. +..+++++|+++ ||.+.|+. .+++||+++ .+++++++++++|.+++++
T Consensus 331 ~~~i~~~~-------------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 331 LLGLKCVV-------------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred EEEEEEec-------------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 67777742 567899999987 99999974 578999965 4899999999999999865
No 134
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=1.2e-29 Score=257.84 Aligned_cols=333 Identities=19% Similarity=0.198 Sum_probs=237.5
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---C---CCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---F---TRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~---~---~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|..+++++.++ .++...|.+++++.+++.+- . ..|. ......+|++.++++ .|. +.+++++|+
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~----~g~----~~~~~~~sG 123 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAF----TGF----ESCLLCQSG 123 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHH----hCC----CcEEEECCH
Confidence 566789998887 77878889999999988641 1 1111 111234455555554 452 467889999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCccc
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 243 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~ 243 (471)
++++..++++++.+||.|+++.+.|.+....++..|++++.++. .|++++++++++ ++++|++++|+||||.
T Consensus 124 ~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~tG~ 196 (407)
T PRK07179 124 WAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYSTTGT 196 (407)
T ss_pred HHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCc
Confidence 99999999999999999999999999888888889998876653 499999999876 5788889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
+++ +++|.++|++| ++++|+||+|....++..+...+..++......+++.|+||.+| .|+||+++++++++.
T Consensus 197 i~p---l~~I~~l~~~~-~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~ 269 (407)
T PRK07179 197 IAP---LADIVDIAEEF-GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEY 269 (407)
T ss_pred ccc---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHH
Confidence 999 88999999999 99999999998654433222222222211123588999999996 379999999999888
Q ss_pred HHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
+...... +..+.++....++.++++. .......+++++++++++.+.|.++ |+++. +.+ .++++.++..
T Consensus 270 ~~~~~~~~~~~~t~~~~~~aa~~aal~~----~~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~-~~~-~i~~l~~~~~-- 340 (407)
T PRK07179 270 VPFVSYPAIFSSTLLPHEIAGLEATLEV----IESADDRRARLHANARFLREGLSEL-GYNIR-SES-QIIALETGSE-- 340 (407)
T ss_pred HHHhCcCeeeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCC-CEEEEEeCCH--
Confidence 7655432 2222233333334455553 2223457788999999999999988 88765 344 4467766532
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~---~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+...+.+.|.++ ||.+..-...+ ..+++||+++. ++++++++++.|++++++..
T Consensus 341 ---------~~~~~~~~~L~~~-GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 341 ---------RNTEVLRDALEER-NVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred ---------HHHHHHHHHHHHC-CceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 0345666776655 98743211111 24689999996 99999999999999987643
No 135
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.98 E-value=2.4e-30 Score=256.71 Aligned_cols=315 Identities=18% Similarity=0.147 Sum_probs=227.1
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEE
Q 012095 105 PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVII 184 (471)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv 184 (471)
+++++|+.+++++.++... ...|++..+..++++.+++++ | ++++++++|+++++..++.+++++||+|++
T Consensus 6 ~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~----g----~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~ 76 (338)
T cd06502 6 TVTGPTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHTQPGGSVIC 76 (338)
T ss_pred cCCCCCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHh----C----CCeEEEecCchHHHHHHHHHhcCCCCeEEE
Confidence 4556788899999876532 346767666667777776665 4 457778888889999999999999999999
Q ss_pred cCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-------CCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 185 PAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 185 ~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-------~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
++|+|..+.. .++..|++++.++.+ . +.+|++++++++++ ++++|++++|+|| |.+++.+++++|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~ 152 (338)
T cd06502 77 HETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAIS 152 (338)
T ss_pred ecCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHH
Confidence 9999876542 456689999999874 2 56999999999874 6889999999997 6677999999999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee-eEcCHHHHHHHHHHHhcc--
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFVAACNKIQSQF-- 331 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~-v~~~~~~i~~l~~~~~~~-- 331 (471)
++|++| ++++|+||+|..+.....+. .+..... +..+++.|+||.++++| |+ +++++++++.+......+
T Consensus 153 ~~~~~~-~~~livDea~~~~~~~~~~~-~~~~~~~--~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
T cd06502 153 ALAKEN-GLPLHLDGARLANAAAALGV-ALKTYKS--GVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGG 225 (338)
T ss_pred HHHHHc-CCeEeechHHHHHHHHhcCC-CHHHHHh--cCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCC
Confidence 999999 99999999986432211111 2222211 22356889999999887 55 567999999988765433
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
....+.+.+.++..+|+. ..+ .+..+++.++++++.+.|+++ |+.+.++.++| +.++++... .
T Consensus 226 ~~~~~~~~~~a~~~~L~~----~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~-~~v~~~~~~----------~ 288 (338)
T cd06502 226 GMRQSGFLAAAGLAALEN----DLW-LRRLRHDHEMARRLAEALEEL-GGLESEVQTNI-VLLDPVEAN----------A 288 (338)
T ss_pred ChhhHHHHHHHHHHHhcC----chH-HHHHHHHHHHHHHHHHHHHhc-CCCcccccCCe-EEEecCCcc----------H
Confidence 334566777778777764 233 345567778889999999988 66666667676 455554210 0
Q ss_pred CHHHHHHHHHH--cCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLD--KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 412 ~~~~l~~~Ll~--~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
....+.+.+.+ +.||.+.+.. .+++|++++. +++++++++++|++
T Consensus 289 ~~~~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 289 VFVELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 12233343331 3589887753 2789999985 88999999998864
No 136
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.98 E-value=1.5e-29 Score=257.16 Aligned_cols=331 Identities=15% Similarity=0.173 Sum_probs=242.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCC-C-CC-------CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRY-T-PN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y-~-~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
.++|.|..+.-.. +|+.+.+++.+.+.....+. . .. .-..++|+.+++++ |. .++++|++|+|++
T Consensus 22 ~~~iYld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~-~~~~~v~~t~g~t 95 (406)
T PRK09295 22 LPLAYLDSAASAQ-KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI----NA-RSAEELVFVRGTT 95 (406)
T ss_pred CceEEEeCccccc-CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc----Cc-CCCCeEEEeCCHH
Confidence 3578888877553 56778898888775422111 0 11 11335556666654 42 1568999999999
Q ss_pred HHHHHHHHH----hcCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCC
Q 012095 166 QSILQAVLA----VCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (471)
Q Consensus 166 ~al~~~~~~----l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p 237 (471)
+++..++.+ ++++||+|+++++.|++ +...++..|++++.++++. ++.+|+++++++++++++++++++|
T Consensus 96 ~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~l~~~ 173 (406)
T PRK09295 96 EGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLAITHV 173 (406)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEEEecc
Confidence 999988876 46899999999988865 3455677899999999864 4568999999999989999999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
+||||.+++ +++|.++|+++ ++++++|++|.... ....+.. .+..+++.|++|.+|.+| +||++++
T Consensus 174 ~n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~g~----~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~ 239 (406)
T PRK09295 174 SNVLGTENP---LAEMIALAHQH-GAKVLVDGAQAVMH----HPVDVQA----LDCDFYVFSGHKLYGPTG--IGILYVK 239 (406)
T ss_pred hhcccccCC---HHHHHHHHHHc-CCEEEEEcccccCc----cccCchh----cCCCEEEeehhhccCCCC--cEEEEEc
Confidence 999999999 88899999999 99999999997532 1122211 344588999999888666 8999999
Q ss_pred HHHHHHHHHHH----------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 318 KHFVAACNKIQ----------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 318 ~~~i~~l~~~~----------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
+++++.+.... +....+++.....++.++++.. .+..++...++.++.++++.+.|
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 240 EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYV--SALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHH
Confidence 98877653110 1112246666777777777641 11235677788888999999999
Q ss_pred cCCCCCeeeCCC--cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEee
Q 012095 376 GELEGVKMSEPQ--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYA 445 (471)
Q Consensus 376 ~~~~g~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iRis~~ 445 (471)
.+++|+++..|. .++ +.+.++.. +..++.+.| +++||.+..|..+ +.++++|+|++
T Consensus 318 ~~~~~~~~~~~~~~~~i-v~~~~~~~------------~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~ 383 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGV-IAFNLGKH------------HAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA 383 (406)
T ss_pred hcCCCEEEeCCCCCceE-EEEEECCc------------CHHHHHHHH-HhCCeEEeccccchHHHHHHHCCCCEEEEEcc
Confidence 998888887653 455 44456542 567777765 5669999998744 33568999999
Q ss_pred c--CHHHHHHHHHHHHHHHH
Q 012095 446 A--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 446 ~--~~e~i~~~~~~l~~~l~ 463 (471)
. +++|++.+++.|+++..
T Consensus 384 ~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 384 MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 6 88999999999988643
No 137
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=2.8e-29 Score=256.61 Aligned_cols=337 Identities=19% Similarity=0.226 Sum_probs=245.5
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCC------CCC---CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTR------YTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~------Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
|.+.+.|..+... ++|+.+.+++.+.+.+...+ |.. .....++|+.+++++ |.+ ++++|++|+|+
T Consensus 30 ~~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~ 103 (424)
T PLN02855 30 GSKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI----NAS-TSREIVFTRNA 103 (424)
T ss_pred CCCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc----CCC-CCCEEEEeCCH
Confidence 4568999998876 46788889988876542111 100 011346666777665 431 35799999999
Q ss_pred HHHHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 165 KQSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 165 ~~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
++++..+++.+ +++||+|+++++.|++ +...++..|++++.++++.++ .+|++.+++.+++++++|++++
T Consensus 104 t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~--~~~~~~l~~~i~~~t~lv~i~~ 181 (424)
T PLN02855 104 TEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDE--VLDVEQLKELLSEKTKLVATHH 181 (424)
T ss_pred HHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCC--CcCHHHHHHHhccCceEEEEeC
Confidence 99999988763 6899999999998875 345567789999999986543 4899999999998999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
|+||||..++ +++|+++|+++ +++|++|++|.. +.... .+.. .+..+++.|++|.+|.+| +||+++
T Consensus 182 ~~n~tG~~~~---~~~I~~l~~~~-g~~vivD~a~~~----g~~~~---~~~~-~~~d~~~~s~~K~~gp~G--~G~l~~ 247 (424)
T PLN02855 182 VSNVLGSILP---VEDIVHWAHAV-GAKVLVDACQSV----PHMPV---DVQT-LGADFLVASSHKMCGPTG--IGFLWG 247 (424)
T ss_pred ccccccccCC---HHHHHHHHHHc-CCEEEEEhhhhc----CCcCC---Cchh-cCCCEEEeecccccCCCc--cEEEEE
Confidence 9999999999 78899999999 999999999963 22111 2221 234588999999887555 899999
Q ss_pred CHHHHHHHHHHH--------------------hcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 317 PKHFVAACNKIQ--------------------SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 317 ~~~~i~~l~~~~--------------------~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
++++++.+.... ..+.. +++.....++.++++.. .+..++++.++.++.++++.+.|
T Consensus 248 ~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l~~~L 325 (424)
T PLN02855 248 KSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYL--SEIGMDRIHEYEVELGTYLYEKL 325 (424)
T ss_pred chhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHH
Confidence 998887653220 00112 23444444455555431 12356778888889999999999
Q ss_pred cCCCCCeeeCCCc------ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEE
Q 012095 376 GELEGVKMSEPQG------AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIR 441 (471)
Q Consensus 376 ~~~~g~~~~~p~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iR 441 (471)
.+++|+++..+.. +.++.+.++.. +..++.+.|.+++||.+..|..+ +.++++|
T Consensus 326 ~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~------------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iR 393 (424)
T PLN02855 326 SSVPGVRIYGPKPSEGVGRAALCAFNVEGI------------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASAR 393 (424)
T ss_pred hcCCCEEEeCCCcccccCcccEEEEEECCc------------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEE
Confidence 9888988875421 23455667642 56788888776669999988743 3357899
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+|++. +++|++++++.|+++++.++
T Consensus 394 iS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 394 ASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred EEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99986 88999999999999987654
No 138
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=1.7e-29 Score=252.48 Aligned_cols=321 Identities=17% Similarity=0.192 Sum_probs=236.6
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC
Q 012095 108 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 187 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p 187 (471)
+.|+.+.+++.+.+.. ..| + +..++.+.+.+.+++.+|.+ .++.+++++|+++++..++.+++.+||+|+++++
T Consensus 9 ~~~~~v~~a~~~~~~~--~~~-~--~~~~~~~~~~~~la~~~g~~-~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~ 82 (356)
T cd06451 9 NVPPRVLKAMNRPMLG--HRS-P--EFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVN 82 (356)
T ss_pred CCCHHHHHHhCCCccC--CCC-H--HHHHHHHHHHHHHHHHhcCC-CCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecC
Confidence 3467788877654311 222 2 34555666667777667742 3346788888899999999999999999999988
Q ss_pred CCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeE
Q 012095 188 FWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (471)
Q Consensus 188 ~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ 264 (471)
+|.+ +...++..|++++.++.++ ++.+|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++ +++
T Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~-~~~ 156 (356)
T cd06451 83 GVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH-DAL 156 (356)
T ss_pred CchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc-CCE
Confidence 7765 4577888999999999864 356899999999987 8999999999999999999 88899999999 999
Q ss_pred EEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH---HHh------------
Q 012095 265 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---IQS------------ 329 (471)
Q Consensus 265 ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~---~~~------------ 329 (471)
|++|++|.. +.....+.. .+..+++.|.+|+++.+ .++||++.++++++.+.. ...
T Consensus 157 li~D~~~~~----g~~~~~~~~----~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (356)
T cd06451 157 LIVDAVSSL----GGEPFRMDE----WGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYW 227 (356)
T ss_pred EEEeeehhc----cCccccccc----cCccEEEecCchhccCC-CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhh
Confidence 999998863 211112211 23346778899999843 468999999998887753 000
Q ss_pred ----cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC---cceEEeEecCCccCC
Q 012095 330 ----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGS 402 (471)
Q Consensus 330 ----~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~---~g~~~~~~~~~~~~~ 402 (471)
....+++...+.++.++++.. ....++...++++++++++.+.|.++ |+++..+. +++++|+.++..
T Consensus 228 ~~~~~~~~t~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--- 301 (356)
T cd06451 228 GEGYSYPHTPPVNLLYALREALDLI--LEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEG--- 301 (356)
T ss_pred cccCCCCCCChHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCC---
Confidence 122234454556666666531 13446777888899999999999987 87765332 345567777643
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
.+..++++.|.+++||.+.+|..+..+++||+|++. ++++++++++.|+++++
T Consensus 302 --------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 302 --------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred --------CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 267889998887669999998866556799999985 88999999999998763
No 139
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=1.9e-29 Score=256.34 Aligned_cols=338 Identities=17% Similarity=0.136 Sum_probs=244.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-------CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-------GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
++.++|..|++.+ ++.+++++...+.. +...|+...+..++++.+.+++++.+|.+ ..+|++++ ++++
T Consensus 19 ~~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~s-gt~a 93 (402)
T cd00378 19 RETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPHS-GSQA 93 (402)
T ss_pred HhCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecCC-cHHH
Confidence 3478888887664 67888888765421 12345566677888888888888888853 34566555 5689
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHH-----HHHcCCEEEEecCCCC-CCCcCCHHHHHhhhc-cCCcEEEEcCCCCC
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEM-----ARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNP 240 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~-----~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~-~~~~~i~i~~p~NP 240 (471)
+..++.++++|||+|++++|+|.++... ++..|.+++.++++.+ +++.+|++++++++. ++++++++++|+||
T Consensus 94 ~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~ 173 (402)
T cd00378 94 NLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP 173 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC
Confidence 9999999999999999999999876543 6678888878877654 267899999999985 58999999999886
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCC-CccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH-
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK- 318 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~- 318 (471)
+ ..+ +++|+++|++| +++||+|++| .++.+.+.....+ .. ..++++|+||++ +|+|.||+++++
T Consensus 174 ~--~~~---~~~I~~l~~~~-~~~li~D~a~~~g~~~~g~~~~~~---~~---~dv~~~s~sK~l--~G~~gg~i~~~~~ 239 (402)
T cd00378 174 R--PID---FKRFREIADEV-GAYLLVDMAHVAGLVAGGVFPNPL---PG---ADVVTTTTHKTL--RGPRGGLILTRKG 239 (402)
T ss_pred C--CcC---HHHHHHHHHhc-CCEEEEEccchhhhhhcccCCCcc---cC---CcEEEeccccCC--CCCCceEEEeccH
Confidence 4 445 88999999999 9999999996 4444443212111 11 127899999987 789999999987
Q ss_pred HHHHHHHHHHhcccCCCChH-HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEec
Q 012095 319 HFVAACNKIQSQFTSGASSI-SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 396 (471)
Q Consensus 319 ~~i~~l~~~~~~~~~~~~~~-~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~ 396 (471)
++++.+.+.......+.+.+ .+.++..++... ...+..+.+++++++++++.+.|.++ |+.+. .|.+++++|+++
T Consensus 240 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~ 316 (402)
T cd00378 240 ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEA--LEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDL 316 (402)
T ss_pred HHHHHHHHHhCccccCCchHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeC
Confidence 89998877655444333333 333333344321 12256777888999999999999988 88775 467899999999
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----CCC--CCCcEEEEeec------CHHHHHHHHHHHHHHHHh
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD----AFG--DDTCIRISYAA------SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~----~f~--~~~~iRis~~~------~~e~i~~~~~~l~~~l~~ 464 (471)
++.. .+...+.+ +++++||.+.++. .++ .+.++|+++.. ++++++++++.|++++++
T Consensus 317 ~~~~----------~~~~~~~~-~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 317 RPKG----------ITGKAAED-ALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred CccC----------CCHHHHHH-HHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 7421 13455555 4566799997643 221 24689999865 489999999999998865
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
-
T Consensus 386 ~ 386 (402)
T cd00378 386 A 386 (402)
T ss_pred c
Confidence 3
No 140
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=9.4e-30 Score=258.07 Aligned_cols=331 Identities=15% Similarity=0.093 Sum_probs=240.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
.|+++||+..|. +.++. ++.+.+++.+++.+.. ..|... ....+++++.+.+|.+ .++++++++|+++
T Consensus 41 dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~-----~~~~la~~l~~~~~~~-~~~~v~~~~sgse 114 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE-----PQIALAERLVELLGAP-EGGRVFFCNSGAE 114 (398)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCH-----HHHHHHHHHHHhCCCC-CCCEEEEeCchHH
Confidence 678899999885 45555 6899999999887521 235322 2245666666555632 3579999999999
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHc-CCE------------EEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 167 SILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIA-DAT------------PVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 167 al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~-G~~------------~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
++..+++.+..+| +.|+..+++|+++...+... |.. +..+|. .|++.+++.+.+++++|
T Consensus 115 a~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~av 187 (398)
T PRK03244 115 ANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTAAV 187 (398)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeEEE
Confidence 9999999776677 56777788998876544322 221 222221 28899999887788999
Q ss_pred EEcCCCCCcccCCCHHH-HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 233 ILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~-l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
+++.++||||.+++.++ +++|.++|++| |+++|+||+|.++...+.. ..+ ...+.... +.+|||.++ +|+|+
T Consensus 188 iiep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~-~~~-~~~~~~pD---i~t~sK~l~-~G~~i 260 (398)
T PRK03244 188 FLEPIQGEAGVVPPPAGYLAAAREITDRH-GALLVLDEVQTGIGRTGAW-FAH-QHDGVTPD---VVTLAKGLG-GGLPI 260 (398)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCcccchH-Hhh-hhhCCCCC---EEEEchhhh-CCccc
Confidence 99999999999887655 99999999999 9999999999876544321 111 11111112 347899998 99999
Q ss_pred eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee--eCCCcc
Q 012095 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM--SEPQGA 389 (471)
Q Consensus 312 G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~--~~p~~g 389 (471)
||+++++++++.+.......+++.+++++.++.++|+.- . -.+..++++++++++.+.|+++ +..+ .....|
T Consensus 261 g~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~---~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g 334 (398)
T PRK03244 261 GACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTI---A--SEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRG 334 (398)
T ss_pred EEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHHhc-CCCceeeEeecc
Confidence 999999999888865445567788999999999998731 1 1234566677778888888875 3321 112357
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.++|+.++.. ....+.++|+++ ||.+.+.. .+++|++++. +++++++++++|++++++++
T Consensus 335 ~~~~i~~~~~------------~~~~~~~~l~~~-Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 335 LLLGIVLTAP------------VAKAVEAAAREA-GFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEEEEEecc------------HHHHHHHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 7789988632 466788888876 99998842 4789999775 88999999999999998754
No 141
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=1.2e-29 Score=257.47 Aligned_cols=330 Identities=21% Similarity=0.277 Sum_probs=239.3
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeC-ChHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQS 167 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~-G~~~a 167 (471)
+..+++|+.|+|++++|+.+.++..++ ...+.|++ ..|.+++++++++++++.+|. +.+++++++ |++++
T Consensus 19 ~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~g~~~~ 94 (398)
T cd00613 19 DQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDEATAAA 94 (398)
T ss_pred ccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCchHHHH
Confidence 345699999999999998888777766 33456766 789999999999999999985 444676666 45555
Q ss_pred HHHHHHHhcCC--CCeEEEcCCCCCChHHHHHHcC----CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 168 ILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIAD----ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 168 l~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G----~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
...+..+++.+ ||+|++++|.|+++...+...| ++++.++++. ++.+|++++++++++++++|++++|+ ||
T Consensus 95 ~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~~~-~~ 171 (398)
T cd00613 95 EAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQYPN-TL 171 (398)
T ss_pred HHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEECCC-CC
Confidence 55555566676 9999999999999998888887 9999998853 35689999999999899999999885 89
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc----chhheeeEcC
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGP 317 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~R~G~v~~~ 317 (471)
|.+. +.+++|.++|++| ++++|+|+++....... . .+..+..+++.|++|.+ +| |+|+||++++
T Consensus 172 G~~~--~~l~~i~~la~~~-g~~livD~~~~~~~~~~----~----~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~ 239 (398)
T cd00613 172 GVFE--DLIKEIADIAHSA-GALVYVDGDNLNLTGLK----P----PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK 239 (398)
T ss_pred ceec--chHHHHHHHHHhc-CCEEEEEeccccccCCC----C----hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh
Confidence 9985 3469999999999 99999999875422100 0 11234569999999998 56 8999999999
Q ss_pred HHHHHHHHHH-----------------------------HhcccCCCC-hHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 318 KHFVAACNKI-----------------------------QSQFTSGAS-SISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 318 ~~~i~~l~~~-----------------------------~~~~~~~~~-~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
+++++.+... .....++.+ ...+.+...+... ....+++++++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~---~~~g~~~~~~~~~~~ 316 (398)
T cd00613 240 KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL---GPEGLKEIAERAHLN 316 (398)
T ss_pred hhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHH
Confidence 8888764110 000111122 2333333333332 356788889999999
Q ss_pred HHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee
Q 012095 368 RDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 445 (471)
Q Consensus 368 r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~ 445 (471)
++++.+.|+++++.. .+.+.++ ++++++...+ .+..++++.|+++ ||.+.... ....+.+|+++.
T Consensus 317 ~~~l~~~L~~~~~~~--~~~~~~~~~v~~~~~~~~~---------~~~~~~~~~L~~~-gi~~~~~~-~~~~~~lRis~~ 383 (398)
T cd00613 317 ANYLAKRLKEVGGVL--PFNGPFFHEFVLRLPPLYG---------IRAEDLAKALIDG-GFHAPTMY-LPVDGTLMIEPT 383 (398)
T ss_pred HHHHHHHHHhcCCcc--cCCCCeeEEEEEEcCCcch---------HHHHHHHHhhhhc-Cccccccc-cCCCCeEEEEcC
Confidence 999999999884443 2344444 4666653100 1567899998876 88764422 123478999998
Q ss_pred c--CHHHHHHHHHHH
Q 012095 446 A--SLTTLQAAVERI 458 (471)
Q Consensus 446 ~--~~e~i~~~~~~l 458 (471)
. ++++|+++++.|
T Consensus 384 ~~~t~edid~~~~~L 398 (398)
T cd00613 384 ETETKEELDALLEAL 398 (398)
T ss_pred CCCCHHHHHHHHHhC
Confidence 6 899999998764
No 142
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.5e-28 Score=249.71 Aligned_cols=336 Identities=19% Similarity=0.198 Sum_probs=243.9
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTR---YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~---Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
++++++|+.++ ..+..++++++++.+++.+...+ +....|..+..+.+++.+.+..| .+..+++++|+ ++..
T Consensus 44 ~~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~~~~~~~~SG~-~An~ 119 (406)
T PRK13393 44 PREVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---KEAALLFTSGY-VSNW 119 (406)
T ss_pred CccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEeCCcH-HHHH
Confidence 45789998887 77777899999999998763222 11223445556666666666666 23445555554 5777
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCccc
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGS 243 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~ 243 (471)
.++..+.. +||.|++....|.+....++..|++++.++. .|++.+++.++ +++++|++++++||+|.
T Consensus 120 ~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 120 AALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred HHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 78887665 7888888888888888888888988877764 26677776664 35678889999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCccchhheeeEcCHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~ 322 (471)
+.+ +++|.++|++| ++++|+||+|....+++.+.. +....+ ..+..|+++||||.+|++| ||+++++++++
T Consensus 193 ~~~---l~~i~~l~~~~-~~~livDea~~~g~~g~~G~g-~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~ 264 (406)
T PRK13393 193 IAP---IAEICDVAEKH-GAMTYLDEVHAVGLYGPRGGG-IAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCD 264 (406)
T ss_pred hhC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCc-hhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHH
Confidence 999 99999999999 999999999985555433221 112111 1234688899999999888 99999999999
Q ss_pred HHHHHHhcc--cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc
Q 012095 323 ACNKIQSQF--TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~ 400 (471)
.+......+ +.+.++..+.++.++|+. .+++ ...+.+++++++++.+.|+++ |+.+.++.+.++ .+.+++.
T Consensus 265 ~l~~~~~~~~~t~~~~p~~~aa~~aaL~~---~~~~-~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~i~-~v~~~~~- 337 (406)
T PRK13393 265 FIRSFASGFIFTTSLPPAVAAGALASVRH---LKAS-SAERERHQDRVARLRARLDKA-GIPHLPNPSHIV-PVMVGDP- 337 (406)
T ss_pred HHHHhCcCceecCccCHHHHHHHHHHHHH---HhhC-HHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCeE-EEEeCCH-
Confidence 988765543 445677778888888875 1222 233466788899999999887 777776777664 4444321
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
.+..++.++|++++||.+.++..... .+++|+++.. +++++++++++|+++++++
T Consensus 338 ----------~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 338 ----------VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred ----------HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 14578888888767999998765442 2689999985 9999999999999998764
No 143
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=6.6e-29 Score=251.96 Aligned_cols=329 Identities=16% Similarity=0.167 Sum_probs=232.8
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.+.|..+-+.. +|+.+.+++.+.+.... ..|....+..++.+.+.+.+.+.+|. ++++|++++|+++++..++
T Consensus 18 ~~yl~~~~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~--~~~~v~~~~~~t~~l~~~~ 94 (397)
T TIGR01976 18 RVFFDNPAGTQ-IPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA--DPPEVVFGANATSLTFLLS 94 (397)
T ss_pred eEEecCCccCC-CCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC--CCCeEEEeCCHHHHHHHHH
Confidence 68888777664 57778888888775421 23533344444455555555555564 4557999999999998777
Q ss_pred HHh---cCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 173 LAV---CSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 173 ~~l---~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
.++ ++|||+|++++|.|.+.. ..++..|++++.++++.+ ++.+|++++++++++++++|++++|+||||..+
T Consensus 95 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~ 173 (397)
T TIGR01976 95 RAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAASNTLGSIV 173 (397)
T ss_pred HHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccC
Confidence 765 689999999999987643 456778999999998743 366899999999998999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+ +++|.++|++| ++++++|+++.. +.... .+.. .+..+++.|++|.+| +|+||+++++++++.+.
T Consensus 174 ~---~~~i~~~~~~~-~~~~ivD~a~~~----~~~~~---~~~~-~~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~ 238 (397)
T TIGR01976 174 D---LAAITELVHAA-GALVVVDAVHYA----PHGLI---DVQA-TGADFLTCSAYKFFG---PHMGILWGRPELLMNLP 238 (397)
T ss_pred C---HHHHHHHHHHc-CCEEEEehhhhc----cccCC---CHHH-cCCCEEEEechhhcC---CceEEEEEcHHHHhhCC
Confidence 8 99999999999 999999999753 22111 2211 244577789999975 46899999999888765
Q ss_pred HHHhccc----------CCCChHHHHHHHHHHh---ccCCC---------hHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 326 KIQSQFT----------SGASSISQKAGVAALG---LGYAG---------GEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 326 ~~~~~~~----------~~~~~~~q~aa~~~L~---~~~~~---------~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
.....+. .+++.....++.++++ ..... ..++++..++..+.++++.+.|.+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~ 318 (397)
T TIGR01976 239 PYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTL 318 (397)
T ss_pred CccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 4322111 1223233333333333 21000 013566777788889999999998867887
Q ss_pred eCC-----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----------CCCcEEEEeec-
Q 012095 384 SEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----------DDTCIRISYAA- 446 (471)
Q Consensus 384 ~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----------~~~~iRis~~~- 446 (471)
..+ .+++ +.+.++.. +..++.++|.++ ||.+..|..+. ..+++|+|++.
T Consensus 319 ~~~~~~~~~~~~-~~~~~~~~------------~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~ 384 (397)
T TIGR01976 319 YGVARLAARVPT-VSFTVHGL------------PPQRVVRRLADQ-GIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHY 384 (397)
T ss_pred eCCCCccCCCce-EEEEeCCc------------CHHHHHHHHHHC-CeEEEeCccchHHHHHHhCCCCCCCeEEEEeecc
Confidence 654 4454 55566532 567889888665 99999886553 23689999986
Q ss_pred -CHHHHHHHHHHH
Q 012095 447 -SLTTLQAAVERI 458 (471)
Q Consensus 447 -~~e~i~~~~~~l 458 (471)
++++++++++.|
T Consensus 385 ~t~~di~~l~~~l 397 (397)
T TIGR01976 385 NTAEEVDRLLEAL 397 (397)
T ss_pred CCHHHHHHHHHhC
Confidence 889999988764
No 144
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=8.8e-29 Score=247.72 Aligned_cols=297 Identities=15% Similarity=0.189 Sum_probs=213.2
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~ 213 (471)
..++++.+++++ |. +++++|+|+++++..++.+++++||.|+++.++|.+....++..|++++.++++.+++
T Consensus 46 ~~~l~~~la~~~----g~----~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 117 (361)
T cd06452 46 IKDFHHDLAEFL----GM----DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPE 117 (361)
T ss_pred HHHHHHHHHHHc----CC----ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCC
Confidence 356677777764 42 7899999999999999999999999999999988887778899999999999976555
Q ss_pred CcCCHHHHHhhhc-------cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 214 FLLDPKVLESKLT-------EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 214 ~~ld~e~l~~~l~-------~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
|.+|+++++++++ ++++++++++|+||||...+ +++|+++|+++ +++||+|++|..... ......
T Consensus 118 ~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~~i~~~~~~~-~~~vivD~a~~~g~~----~~~~~~ 189 (361)
T cd06452 118 YHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AKKIAKVCHEY-GVPLLLNGAYTVGRM----PVSGKE 189 (361)
T ss_pred cccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HHHHHHHHHHc-CCeEEEECCcccCCc----CCCHHH
Confidence 7899999999886 36889999999999999887 88999999999 999999999974211 111111
Q ss_pred CCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhccc--------CCCChHHHHHHHHHHhccCCChHHHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFT--------SGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~--------~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
.+..+++.|+||.++ ++.|+||+++++++++++.+...+++ .+.+...+.++.+++.. ..++++
T Consensus 190 ----~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~ 261 (361)
T cd06452 190 ----LGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPH---VKERVK 261 (361)
T ss_pred ----cCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHH---HHHHHH
Confidence 245689999999998 55699999999999998876553321 11222234444444442 123343
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeeC--CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~~~~--p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
...+. .++++++.+.|++++|+++.. +....++.++.+.... .... ......++.++|+++ ||.+.. .+.
T Consensus 262 ~~~~~-~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~-~~~~--~~~~~~~~~~~L~~~-gI~~~~---~~~ 333 (361)
T cd06452 262 RWDEE-VEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDE-IAKK--HKRRGYFLYSELKKR-GIHGIK---PGL 333 (361)
T ss_pred HHHHH-HHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcch-hhhh--ccccchhHHHHHHHc-CceEEc---CCC
Confidence 33333 345578899999998988762 2233345666652100 0000 001234688988776 998532 344
Q ss_pred CCcEEEEeec-CHHHHHHHHHHHHHHH
Q 012095 437 DTCIRISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 437 ~~~iRis~~~-~~e~i~~~~~~l~~~l 462 (471)
..++|++... ++++++.+++.|+++.
T Consensus 334 ~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 334 TRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 5689999954 8899999999998654
No 145
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=9.7e-29 Score=254.32 Aligned_cols=328 Identities=19% Similarity=0.255 Sum_probs=239.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC--CCHHHHHHHH---HHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA--GTLELRSAIC---HKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~--G~~~lr~~ia---~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
..+.|+.|.+++.+|..+.++.... +....|.|.. -...+++.+. +.+.+.+|. +.+++++|+|+++++..
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~--~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~--~~~~v~~~~g~t~~~~~ 144 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGM--DVANASMYDGATALAEA 144 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhch--hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCC--CcceEEecCcHHHHHHH
Confidence 5678999999998888776665443 2234465511 1233566665 455778885 45689999999999998
Q ss_pred HHHHhc-CCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 171 AVLAVC-SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 171 ~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
++.++. .+||+|+++++.|+++...++. .|++++.+++++ + .+|++++++++++++++|++++| ||||.+.
T Consensus 145 ~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~ 220 (447)
T PRK00451 145 ALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIE 220 (447)
T ss_pred HHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeC
Confidence 888874 7999999999999999877654 699999999864 3 68999999999989999999999 8999998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEE--ccCCCccccCCCCccccccCCCCCCceEEEe---cCCcccCccchhheeeEcCHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLS--DEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~--De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
+ +++|.++|+++ ++++++ |.+... . ...+...+..+++. +|||.++++|+|+||+++++++
T Consensus 221 ~---l~~I~~~a~~~-~~~~iv~~d~~~~g-----~-----~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~ 286 (447)
T PRK00451 221 D---LEEIAEIAHAG-GALFIVGVDPVSLG-----L-----LKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKL 286 (447)
T ss_pred C---HHHHHHHHHHC-CCEEEEEcChHHhc-----c-----CCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHH
Confidence 8 99999999999 998887 433211 0 00112234456665 7888888899999999999988
Q ss_pred HHHH----------------------------HHHHhcccCCCChHHH-HHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 321 VAAC----------------------------NKIQSQFTSGASSISQ-KAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 321 i~~l----------------------------~~~~~~~~~~~~~~~q-~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
++.+ ++.+...+.+.+...+ .++..++... .+..++++.+++.++++++
T Consensus 287 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~--~~~g~~~~~~~~~~~~~~l 364 (447)
T PRK00451 287 VRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLL--GPEGLRELAEQNHQKAHYL 364 (447)
T ss_pred HhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHH
Confidence 8873 1122222333333333 3333344321 3567899999999999999
Q ss_pred HHHhcCCCCCeeeCCCcceEEe--EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-
Q 012095 372 VKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA- 446 (471)
Q Consensus 372 ~~~L~~~~g~~~~~p~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~- 446 (471)
.+.|++++|+++. .+++|.+ ++++. +..+++++|++++.+...++..|+. .+++|+++..
T Consensus 365 ~~~L~~~~g~~~~--~~~~~~~~~v~~~~-------------~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~ 429 (447)
T PRK00451 365 AERLAEIGGVELF--DGPFFNEFVVRLPK-------------PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEK 429 (447)
T ss_pred HHHHhhcCCEEec--CCCeEEEEEEecCC-------------CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCC
Confidence 9999998888875 4556654 44431 5678999998874443456666652 4799999973
Q ss_pred -CHHHHHHHHHHHHHHH
Q 012095 447 -SLTTLQAAVERIKKGL 462 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l 462 (471)
++++++++++.|++++
T Consensus 430 ~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 430 RTKEDIDALVAALGEVL 446 (447)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 8899999999998764
No 146
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=7.9e-29 Score=249.96 Aligned_cols=336 Identities=14% Similarity=0.090 Sum_probs=237.7
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--CC--CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G--~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.|..+.... +|+.+.+++.+.+.....+++.. .| ..++.+.+.+.+++.+| .++++|++|+|+++++..++.
T Consensus 2 ~yld~a~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 2 IYLDYAATTP-MSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG--GEEQGIYFTSGGTESNYLAIQ 78 (381)
T ss_pred EeccCCCCCC-CCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCcHHHHHHHHHH
Confidence 4555555443 47778899888776422222110 11 12344444455555556 367899999999999998888
Q ss_pred Hhc----CCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCC
Q 012095 174 AVC----SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 174 ~l~----~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~ 246 (471)
+++ ++||.|++....|+++.. .++..|++++.++++. ++.+|++++++.+++++++|++++|+||||.+++
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~ 156 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHANSEIGTIQP 156 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehh
Confidence 875 578999999977776554 4567799999999863 3568999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH-HHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACN 325 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~-i~~l~ 325 (471)
+++|.++|+++ ++++++|+++... ..... +. ..+..+++.|++|.+|.+| +|++++++++ +..+.
T Consensus 157 ---~~~I~~l~~~~-~~~vivD~~~~~g----~~~~~---~~-~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~ 222 (381)
T PRK02948 157 ---IAEIGALLKKY-NVLFHSDCVQTFG----KLPID---VF-EMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVF 222 (381)
T ss_pred ---HHHHHHHHHHc-CCEEEEEChhhcc----ccccC---cc-cCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcc
Confidence 88899999999 9999999776532 11111 11 1356688999999999888 8999887664 11111
Q ss_pred H----HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-cceE----EeEec
Q 012095 326 K----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFY----LFIDF 396 (471)
Q Consensus 326 ~----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~g~~----~~~~~ 396 (471)
. .......+++.+++.++.++|+. ..+++++.+++.++.++++.+.|+++ |+++.... .++. +.+.+
T Consensus 223 ~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~ 298 (381)
T PRK02948 223 PGTTHEKGFRPGTVNVPGIAAFLTAAEN---ILKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTI 298 (381)
T ss_pred cCCCCCCCcCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEe
Confidence 0 01112346788888989888875 34678888999999999999999988 66554322 2221 11222
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------------CC-----CCcEEEEeec--CHHHHHHHH
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------------GD-----DTCIRISYAA--SLTTLQAAV 455 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------------~~-----~~~iRis~~~--~~e~i~~~~ 455 (471)
+. .+..++...|. ++||.+..|..+ +. .+++|+|++. +++|+++++
T Consensus 299 ~~------------~~~~~~~~~l~-~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~ 365 (381)
T PRK02948 299 KG------------IEGQYTMLECN-RRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTI 365 (381)
T ss_pred CC------------CCHHHHHHhcc-cCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHH
Confidence 22 15667777764 559999988742 11 3689999986 889999999
Q ss_pred HHHHHHHHhhCCCC
Q 012095 456 ERIKKGLLTLRPGV 469 (471)
Q Consensus 456 ~~l~~~l~~~~~~~ 469 (471)
+.|+++++++-.++
T Consensus 366 ~~l~~~~~~~~~~~ 379 (381)
T PRK02948 366 HALETIGNQFYRGV 379 (381)
T ss_pred HHHHHHHHHHhccc
Confidence 99999987764443
No 147
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.97 E-value=9.3e-29 Score=252.19 Aligned_cols=347 Identities=15% Similarity=0.161 Sum_probs=240.4
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|.++||+..|. ..++ .++.+.+++.+++.. ...|....+..++...+++.+.+.+|. ..+++++++|+++++.
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgsea~~ 110 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAK-LTHFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEAVE 110 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHh-CcCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHHHHH
Confidence 678899999874 4455 578899999998865 345544445678888888888887774 5789999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHcC-------------CEEEEecCCCC----CCCcCCHHHHHhhhcc---
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRIS----ENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~----~~~~ld~e~l~~~l~~--- 227 (471)
.+++.+. .++|.|++.+++|+++.......+ .+++.+|.+.. .++..|++.|++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 9998774 578999999999998765443322 23556665421 1245589999998875
Q ss_pred CCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 228 KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
++++++++..+|++|..+ +++++++|.++|++| ++++|+||+|..+...+.. .. ....+ ....+.||||.++
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~g~g~~g~~-~~-~~~~~---~~~d~~t~sK~l~- 263 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH-GILLIADEVQTGFGRTGKM-FA-FEHFG---VEPDIVTLGKGLG- 263 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcch-hh-HhhcC---CCCCeEEEccccc-
Confidence 344555544467789876 777899999999999 9999999999976333321 11 11111 1112558999998
Q ss_pred cchhheeeEcCHHHHHHH--HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC---CC
Q 012095 307 TGWRLGYIAGPKHFVAAC--NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GV 381 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l--~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---g~ 381 (471)
.|+|+||+++++++++.+ .......+++.+++++.++.++|+.- ++ .++.++++++++++.+.|+++. ++
T Consensus 264 ~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~ 338 (413)
T cd00610 264 GGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVL---EE--EGLLENAAELGEYLRERLRELAEKHPL 338 (413)
T ss_pred CccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 589999999999999986 33334456678899999888888641 11 3455666666677766666541 22
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.......|.++++.++...... .........+++.|+++ ||.+.|+. .+++|++++. +++++++++++|+
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~-gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~~~l~ 410 (413)
T cd00610 339 VGDVRGRGLMIGIELVKDRATK---PPDKELAAKIIKAALER-GLLLRPSG----GNVIRLLPPLIITEEEIDEGLDALD 410 (413)
T ss_pred EEEeecCceEEEEEEecCCCcC---CcchHHHHHHHHHHHHC-CeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 1112234566777775421000 00001456788888776 99999975 5789998775 8899999999998
Q ss_pred HHH
Q 012095 460 KGL 462 (471)
Q Consensus 460 ~~l 462 (471)
+++
T Consensus 411 ~~l 413 (413)
T cd00610 411 EAL 413 (413)
T ss_pred HhC
Confidence 763
No 148
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.97 E-value=6.8e-28 Score=244.56 Aligned_cols=333 Identities=13% Similarity=0.166 Sum_probs=236.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+.. .++.. ...+....+++.+.+..+ .+.++++++++++..
T Consensus 38 dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~~-~~~~~~~~l~~~l~~~~~----~~~~~~~~sGseA~e 111 (403)
T PRK05093 38 QGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLW-HISNV-FTNEPALRLAKKLIDATF----AERVFFANSGAEANE 111 (403)
T ss_pred CCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcC-cccCc-cCCHHHHHHHHHHHhhCC----CCEEEEeCchHHHHH
Confidence 578899998873 33443 7889999999886522 22221 223334566666655433 368999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHH-HHcC------------CEEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 170 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMA-RIAD------------ATPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 170 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~-~~~G------------~~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.+++... .++ +.|+..+-+|++....+ ...| .+++.++. .|++.+++.+.++
T Consensus 112 ~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 184 (403)
T PRK05093 112 AAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH 184 (403)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC
Confidence 8888641 123 56777788777754322 2211 11222221 1889999999878
Q ss_pred CcEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 229 SRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~--~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++|+++ |.||+|.++ +.+.+++|+++|++| ++++|+||+|.++.+.+.. .+.....-..+ +.||||.++
T Consensus 185 ~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pd----i~s~sK~l~- 256 (403)
T PRK05093 185 TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH-NALLIFDEVQTGMGRTGDL-FAYMHYGVTPD----ILTSAKALG- 256 (403)
T ss_pred eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccc-hhhhhcCCCCC----EEEeccccc-
Confidence 8888777 888887665 899999999999999 9999999999987666532 12111111112 678999998
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC---CCee
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GVKM 383 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---g~~~ 383 (471)
+|||+||+++++++++.+.......+++.+++.|.++.++|+.. ...+..+.++++++++.+.|+++. ++..
T Consensus 257 ~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~-----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 331 (403)
T PRK05093 257 GGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDII-----NTPEVLEGVKARRQRFVDGLQKINQKYGVFS 331 (403)
T ss_pred CCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-----hhccHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 99999999999999998876545566788999999999988641 123556788899999999998751 2222
Q ss_pred eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
..+.+|+++|+.++... ..+..+|++.|+++ ||.+.|+. .+++|++++. ++++|++++++|+++
T Consensus 332 ~~~~~G~~~~~~l~~~~---------~~~~~~~~~~l~~~-Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 332 EIRGMGLLIGAELKPQY---------KGRARDFLNAAAEE-GVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEKA 397 (403)
T ss_pred eEeeCceEEEEEecCcc---------hhHHHHHHHHHHHC-CeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 34466888999886421 01467899998876 89998843 4789996554 899999999999999
Q ss_pred HHhh
Q 012095 462 LLTL 465 (471)
Q Consensus 462 l~~~ 465 (471)
+.++
T Consensus 398 l~~~ 401 (403)
T PRK05093 398 VAKV 401 (403)
T ss_pred HHHh
Confidence 8754
No 149
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=8.2e-28 Score=243.51 Aligned_cols=327 Identities=15% Similarity=0.099 Sum_probs=248.5
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 188 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~ 188 (471)
.|+.+++++... ..+| ...+..++++.+.+.+++.+|.+ ..+.+++++|+++++..++..++++||+|++.++.
T Consensus 20 ~~~~V~~a~~~~----~~~~-~~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~ 93 (401)
T PLN02409 20 IPERVLRAMNRP----NEDH-RSPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIG 93 (401)
T ss_pred CCHHHHHHhcCC----CCCC-CCHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCC
Confidence 466777766542 3333 34567899999999999999864 23578889999999999999999999999999998
Q ss_pred CCCh--HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 189 WVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 189 y~~~--~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
|.+. ...++..|++++.++.+.+ ..+|++++++++++ ++++|++++++||||.+++.+++.++++ |+++ +
T Consensus 94 ~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~-g 169 (401)
T PLN02409 94 QFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH-P 169 (401)
T ss_pred chhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc-C
Confidence 8766 3677888999999998643 34799999999975 7899999999999999999444444444 9999 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh-------------
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------- 329 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~------------- 329 (471)
+++|+|++++. +.... .+. .++..+++.|.+|+++.| .++||+++++++++++.....
T Consensus 170 ~~~vvD~v~s~----g~~~i---d~~-~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T PLN02409 170 ALLLVDGVSSI----GALDF---RMD-EWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADYLKF 240 (401)
T ss_pred cEEEEEccccc----CCccc---ccc-ccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHHHHH
Confidence 99999999874 21111 121 134457888889999643 479999999998887653210
Q ss_pred -----cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC----cceEEeEecCCcc
Q 012095 330 -----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFSTYY 400 (471)
Q Consensus 330 -----~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----~g~~~~~~~~~~~ 400 (471)
...++++...+.++.++++.- .+..++.+.++++++++++.+.|+++ |+++..+. .+..+++.+|+.+
T Consensus 241 ~~~g~~~~~Tp~~~~~~al~~al~~~--~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~ 317 (401)
T PLN02409 241 YKLGTYWPYTPSIQLLYGLRAALDLI--FEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEGI 317 (401)
T ss_pred HhcCCCCCCCccHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCCC
Confidence 113356777777888887741 13457888999999999999999887 88776542 2233567777542
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
+..++.+.|++++||.+.+|.+-.....|||+... +.+++..++..|++++.+++..
T Consensus 318 -----------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g~~ 376 (401)
T PLN02409 318 -----------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVGYP 376 (401)
T ss_pred -----------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcCCC
Confidence 67789888988899999998764446899999987 8899999999999999887643
No 150
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=8.9e-28 Score=241.89 Aligned_cols=334 Identities=16% Similarity=0.190 Sum_probs=234.9
Q ss_pred hcCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|.. .++ .++.+.+++.+++.+... + ...+..++++.+++++.+..+ .+.+++++++++++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~a~ 99 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWH-V-SNLFTNSLQEEVASLLAENSA----GDLVFFCNSGAEAN 99 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccc-c-ccccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHHHH
Confidence 36788999999973 233 378899999999876322 2 233557899999999976544 25899999999999
Q ss_pred HHHHHHh-cCCC-CeEEEcCCCCCChH-HHHHHcCCEEE---EecCCCCCCCc--CCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 169 LQAVLAV-CSPG-DEVIIPAPFWVSYP-EMARIADATPV---ILPTRISENFL--LDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 169 ~~~~~~l-~~~g-d~Vlv~~p~y~~~~-~~~~~~G~~~~---~v~~~~~~~~~--ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
..+++.. ..+| +.|++.+++|++.. ......+.... ..|..++..+. .|++.+++.+.+++++|++..++++
T Consensus 100 ~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~ 179 (377)
T PRK02936 100 EAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGE 179 (377)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCC
Confidence 9988854 2355 67999999888543 22333332111 11111110010 1789999999888899999888999
Q ss_pred cccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH
Q 012095 241 TGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (471)
Q Consensus 241 tG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~ 319 (471)
+|.. .+++.+++|.++|++| ++++|+||+|.++.+.+.. ..+.......+ +.+|||.++ +|+|+||++++++
T Consensus 180 ~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~-~~~~~~~~~~d----i~t~sK~l~-~G~~ig~v~~~~~ 252 (377)
T PRK02936 180 GGVIPADPAFLQEVQTLCKKF-GALLIIDEVQTGIGRTGTL-FAYEQFGLDPD----IVTVAKGLG-NGIPVGAMIGKKE 252 (377)
T ss_pred CCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hHHHhhCCCCc----EEEEccccc-CCCccEEEEEcHH
Confidence 9976 6889999999999999 9999999999887655431 12112211112 347999999 9999999999999
Q ss_pred HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeCCCcceEEeEe
Q 012095 320 FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQGAFYLFID 395 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g~~~~~p~~g~~~~~~ 395 (471)
+++.+.......+++.+++.|.++.++|+... .++.+++++++.+++.+.|++ ++.+....+ .|+++|+.
T Consensus 253 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~ 326 (377)
T PRK02936 253 LGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK-----QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG-KGLMIGIE 326 (377)
T ss_pred HHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH-----hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-cceEEEEE
Confidence 99988655455567789999999999997521 123344555566666655554 333332333 46789999
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHHHHHHHHHHHHH
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTLQAAVERIKKGL 462 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~i~~~~~~l~~~l 462 (471)
+++ +...+.+.|.+ .||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 327 ~~~-------------~~~~~~~~l~~-~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 327 CTE-------------EVAPVIEQLRE-EGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ecc-------------hHHHHHHHHHH-CCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 863 35677777665 499998853 47899996 449999999999998763
No 151
>PRK07049 methionine gamma-lyase; Validated
Probab=99.97 E-value=1.6e-27 Score=241.91 Aligned_cols=225 Identities=14% Similarity=0.205 Sum_probs=179.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 201 (471)
.+| +++....|++.|+++. ..+++++++|+++++..++.+++++||.|++++|+|..|...+ ...|+
T Consensus 78 ~R~-~~Pt~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRF-NHPNSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCC-CCcCHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 456 5556688999999985 2457888899999999999999999999999999999997654 56799
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhc-----cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh---CCCeEEEEccCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLT-----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK---HPRLLVLSDEIYEH 273 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~-----~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~---~~~~~ii~De~y~~ 273 (471)
+++.++. . .|++.+++++. +++|+|++++|+||||.+++.+++.+|++.|.+ + +++||+||+|..
T Consensus 149 ~~v~~~~---~---~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~-~~~vvvDety~~ 221 (427)
T PRK07049 149 GAVGFAD---G---LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGH-RPIIACDNTLLG 221 (427)
T ss_pred EEEEEeC---C---CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC-CCEEEEECCccc
Confidence 8777762 1 46777776663 478999999999999999998888888887643 6 899999999875
Q ss_pred cccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC
Q 012095 274 IIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA 352 (471)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~ 352 (471)
..+. .++ ..+..|+++||||.+| ++|+|+||+++++++++.+...+..++.+.+++.|.++...|+.
T Consensus 222 ~~~~----~pl-----~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t--- 289 (427)
T PRK07049 222 PVFQ----KPL-----EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET--- 289 (427)
T ss_pred cccC----Ccc-----ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh---
Confidence 3221 111 1245699999999998 79999999999999999999988888888999988877666542
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 353 GGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
+...+++..++++.+.+.|++.|++.
T Consensus 290 ----l~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 290 ----LVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 44555666889999999999987764
No 152
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=9.7e-28 Score=241.37 Aligned_cols=313 Identities=17% Similarity=0.206 Sum_probs=226.4
Q ss_pred ChHHHHHHHHHHHHcCCC--CCCCC-------CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC--
Q 012095 109 TPVLIAEAGINAIREGFT--RYTPN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-- 177 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~--~Y~~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~-- 177 (471)
+|+.+.+++.+.+..... ..++. ....++|+.+++++ |.+ +++++++|+|+++++..++.++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 11 KPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----NAP-SPDEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh----CCC-CCCeEEEeCCHHHHHHHHHHHhhhcC
Confidence 367788888877643211 01111 12235556666554 532 367999999999999999999987
Q ss_pred -CCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 178 -PGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 178 -~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+||+|++++++|++. ...++..|++++.++.+ .++.+|++++++.+++++++|++++|+||||.+.+ +++
T Consensus 86 ~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~~~ 160 (373)
T cd06453 86 KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---VKE 160 (373)
T ss_pred CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---HHH
Confidence 899999999999874 33456789999999986 34569999999999889999999999999999999 789
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhc--
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ-- 330 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~-- 330 (471)
|.++|++| +++|++|++|..... ...+.. .+..+++.|++|.++. .++||+++++++++.+......
T Consensus 161 i~~~~~~~-~~~li~D~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~~~--~g~g~~~~~~~~~~~~~~~~~g~~ 229 (373)
T cd06453 161 IGEIAHEA-GVPVLVDGAQSAGHM----PVDVQD----LGCDFLAFSGHKMLGP--TGIGVLYGKEELLEEMPPYGGGGE 229 (373)
T ss_pred HHHHHHHc-CCEEEEEhhhhcCce----eeeccc----cCCCEEEeccccccCC--CCcEEEEEchHHhhcCCCeecCCC
Confidence 99999999 999999999874221 111111 2334777888999974 5689999999988876643211
Q ss_pred -------------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC---Cc
Q 012095 331 -------------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QG 388 (471)
Q Consensus 331 -------------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---~~ 388 (471)
...+++.....++.++++.. .+..++.++++.++.++++.+.|.+++|+++..+ .+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l--~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 307 (373)
T cd06453 230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYL--EKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRA 307 (373)
T ss_pred ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccC
Confidence 01234444555555555431 1234577888888999999999999888887632 33
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEeec--CHHHHHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISYAA--SLTTLQAAVERI 458 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iRis~~~--~~e~i~~~~~~l 458 (471)
+ ++++.++.. +..++.+.|.+ +||.+.+|..+ +.++++|+|++. +.++++++++.|
T Consensus 308 ~-~~~~~~~~~------------~~~~i~~~l~~-~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 308 G-VVSFNLEGI------------HPHDVATILDQ-YGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred C-eEEEEECCc------------CHHHHHHHHHH-CCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 4 456666532 67788888766 59999887643 336799999996 889999998764
No 153
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=2.3e-27 Score=236.84 Aligned_cols=319 Identities=13% Similarity=0.175 Sum_probs=228.1
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-
Q 012095 108 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA- 186 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~- 186 (471)
.+++.+.+++.... ..+. ....++.+.+.+.+++..|.+-+...|+++.|+++++..++..++.+||.|++..
T Consensus 9 ~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~ 82 (355)
T TIGR03301 9 STSATVRDAMLVDW----CHWD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN 82 (355)
T ss_pred CCCHHHHHHhhhhc----cCCC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence 34566777666522 2221 1223555666666666667542223688899999999999999998888866555
Q ss_pred CCCCC-hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 187 PFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 187 p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
+.|.. +...++..|.+++.++.+. ++.+|++++++++++ +.+.+++++++||||...+ +++|+++|++| ++
T Consensus 83 ~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~-~~ 156 (355)
T TIGR03301 83 GAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSH-GA 156 (355)
T ss_pred CchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHc-CC
Confidence 45544 4567888999999998753 456899999999864 4556778899999999998 89999999999 99
Q ss_pred EEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHHHHHHH--------------
Q 012095 264 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ-------------- 328 (471)
Q Consensus 264 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~~-------------- 328 (471)
++|+|+++... .....+.. .+..+++.|++|.+ |++| +||+++++++++.+....
T Consensus 157 ~livD~~~s~g----~~~~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (355)
T TIGR03301 157 VLIVDAMSSFG----AIPIDIEE----LDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWAYM 226 (355)
T ss_pred EEEEEeccccC----Ccccchhh----cCccEEEecCCcccccCCc--eeEEEECHHHHHHhhCCCCCceeeHHHHHHHh
Confidence 99999877642 11112221 34568899999987 5555 799999999988765210
Q ss_pred ---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC---CcceEEeEecCCccCC
Q 012095 329 ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGS 402 (471)
Q Consensus 329 ---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---~~g~~~~~~~~~~~~~ 402 (471)
....++++...+.++.++++.-. .+.++++..++++++++++.+.|+++ |+++..+ .+++++|+++|....
T Consensus 227 ~~~~~~~~t~~~~~~~a~~~al~~~~-~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~- 303 (355)
T TIGR03301 227 EKTGKWRFTPPTHTVYAFAQALEELE-AEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDPD- 303 (355)
T ss_pred hhcCCCCCCCcHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCCc-
Confidence 11234577777777777776410 01226778888999999999999887 8775433 345667888874210
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
.+..++.++|.++ ||.+.+|..+.. +++||++.. +.++++++++.|+++
T Consensus 304 --------~~~~~~~~~l~~~-gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 304 --------FDFDDFYQELKER-GFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred --------chHHHHHHHHHHC-CEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 1456788887765 999999876654 799999854 889999999999875
No 154
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=1.7e-27 Score=239.90 Aligned_cols=341 Identities=15% Similarity=0.180 Sum_probs=232.6
Q ss_pred EEcCCCC-CCCCChHHHHHHHHHHHHc-------CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 98 IRLAAGE-PDFDTPVLIAEAGINAIRE-------GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 98 i~l~~g~-~~~~~p~~v~~a~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
++|+.++ ..+...+++++++.+++.+ ....|+...+..+|++.+++++ | ..+.+++++|.++.+
T Consensus 1 ~~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~----g---~e~al~~~sG~~a~~- 72 (392)
T PLN03227 1 LNFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL----G---TESAILYSDGASTTS- 72 (392)
T ss_pred CCCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh----C---CCcEEEecCcHHHHH-
Confidence 3566665 6677788999999998876 2234665566778888888876 3 346788888877777
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-----------cCCcEEEEcCCC
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-----------EKSRLLILCSPS 238 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-----------~~~~~i~i~~p~ 238 (471)
.++.+++++||.|+++++.|.++...+...+++++.++.... -+++.+.+.+. +++++|++.+++
T Consensus 73 ~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~ 148 (392)
T PLN03227 73 STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLY 148 (392)
T ss_pred HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEcCCc
Confidence 577778999999999999999999888888998888876411 13444443442 257788899999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
||+|.+.+ +++|.++|++| ++++|+||+|....++.. .......+.+..+..|++.|+||.+| ++.||+++
T Consensus 149 ~~~G~i~~---l~~i~~l~~~~-g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~ 221 (392)
T PLN03227 149 KNTGTLAP---LKELVALKEEF-HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVG 221 (392)
T ss_pred CCCCcccC---HHHHHHHHHHc-CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEec
Confidence 99999999 88999999999 999999999983323221 11111122222455799999999876 44599999
Q ss_pred CHHHHHHHHHHHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe----------ee
Q 012095 317 PKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK----------MS 384 (471)
Q Consensus 317 ~~~~i~~l~~~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~----------~~ 384 (471)
++++++.+.......+++. +++.+.++.+++... .+ .++++++++++.+++.+.|++. +.. +.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~---~~-~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~ 296 (392)
T PLN03227 222 SEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE---LA-GPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVIT 296 (392)
T ss_pred CHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH---hc-CHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccC
Confidence 9999988765444344444 466777777666531 11 3456777888888888888752 221 11
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC-------CCCCCCcEEEEeec--CHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD-------AFGDDTCIRISYAA--SLTTLQAAV 455 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~-------~f~~~~~iRis~~~--~~e~i~~~~ 455 (471)
....+..+.+.+.+.... ..........++++.|+++ ||.+.+.. .+-++..+|+++.. ++|+|++++
T Consensus 297 ~~~~~~i~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~-Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~ 373 (392)
T PLN03227 297 SDPISPIIYLRLSDQEAT--RRTDETLILDQIAHHSLSE-GVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLL 373 (392)
T ss_pred CCCCCCEEEEEeCCHHHh--hhhhhhhHHHHHHHHHHHC-CCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHH
Confidence 112233455666431000 0000000124788888876 89886521 23345789999987 999999999
Q ss_pred HHHHHHHHhh
Q 012095 456 ERIKKGLLTL 465 (471)
Q Consensus 456 ~~l~~~l~~~ 465 (471)
+.|+++++++
T Consensus 374 ~~l~~~~~~~ 383 (392)
T PLN03227 374 TVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 155
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=3.4e-28 Score=242.05 Aligned_cols=309 Identities=17% Similarity=0.176 Sum_probs=232.1
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC------------
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS------------ 177 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~------------ 177 (471)
+..+.+.+...+......|+...+..++++++++++.+.+|.+..++++++|+|+++++..++++++.
T Consensus 12 ~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~ 91 (345)
T cd06450 12 PALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGR 91 (345)
T ss_pred HHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccc
Confidence 44566666666655556698889999999999999999999754456899999999999999988753
Q ss_pred CC--CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHH
Q 012095 178 PG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 178 ~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
++ +.|++++++|.++...++..|++++.++++++ +.+|+++|++++++ +++++++++|+||||.+.+
T Consensus 92 ~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~--- 166 (345)
T cd06450 92 GIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP--- 166 (345)
T ss_pred ccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC---
Confidence 33 47889999999999899989999999998753 46999999999987 7888889999999999987
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS 329 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~ 329 (471)
+++|+++|+++ ++++++|++|..+.+........ .....+-..+..|++|.++ ++.++||++.+
T Consensus 167 ~~~i~~~~~~~-~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~------------ 230 (345)
T cd06450 167 LEEIADLAEKY-DLWLHVDAAYGGFLLPFPEPRHL--DFGIERVDSISVDPHKYGL-VPLGCSAVLVR------------ 230 (345)
T ss_pred HHHHHHHHHHh-CCeEEEechhhHHHhhChhhHHH--hcCccccCEEEEchhHhhC-CCcchHHHHHH------------
Confidence 89999999999 99999999998766432111111 0111122356679999875 77889998655
Q ss_pred cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecCCccCCcccCCC
Q 012095 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 330 ~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
.+.+.++...+. ...+++.+++..++++++.+.|.+++|+.+.. ++++++.| +++....
T Consensus 231 -------~~~~~~~l~~l~-----~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f-~~~~~~~------- 290 (345)
T cd06450 231 -------ALKLWATLRRFG-----RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCF-RLKPSVK------- 290 (345)
T ss_pred -------HHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEE-EECCcch-------
Confidence 444445555553 45677888888899999999999988887654 56666544 4543100
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHH
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKK 460 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~ 460 (471)
...+..++.++|.++ |+.+.++..+..++++|+++.. +.++++++++.|++
T Consensus 291 ~~~~~~~i~~~L~~~-g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNER-GGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hhHHHHHHHHHHHhc-CCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 001456888888766 5556665555556799999984 78999999998875
No 156
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=1.1e-27 Score=241.77 Aligned_cols=323 Identities=18% Similarity=0.147 Sum_probs=235.7
Q ss_pred ChHHHHHHHHHHHHcCC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-----C
Q 012095 109 TPVLIAEAGINAIREGF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-----S 177 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-----~ 177 (471)
+++.+++++.+.+.+.. +.| +..+...++++++++... .|. .++++|++|+|+++++..+++++. +
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~-~~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~~ 87 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQF-GTATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHH-HHHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhccc
Confidence 46688999988776421 123 234567888888887753 332 257899999999999999888762 4
Q ss_pred C-CCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 178 P-GDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 178 ~-gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+ +|+|+++...|+++... ++..|++++.+|++. ++.+|++.++++++++++++++++|+||||.+++ +++|
T Consensus 88 ~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~I 162 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKEI 162 (382)
T ss_pred CCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHHH
Confidence 5 47899998777766543 566899999999864 3568999999999989999999999999999999 7889
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH--HHH---HHHH
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV--AAC---NKIQ 328 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i--~~l---~~~~ 328 (471)
.++|+++ |+++++|+++.. +.....+.. .+..+++.|++|.+|.+| +|+++.++... ..+ ....
T Consensus 163 ~~la~~~-g~~~ivD~a~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~ 231 (382)
T TIGR03403 163 GEICKER-GVLFHTDAVQAI----GKIPVDVQK----AGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMG 231 (382)
T ss_pred HHHHHHc-CCEEEEechhhc----CCCccCccc----cCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCC
Confidence 9999999 999999999874 211111111 233488899999988777 58776554321 101 0011
Q ss_pred hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc---ceEEeEecCCccCCccc
Q 012095 329 SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTYYGSEAE 405 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~---g~~~~~~~~~~~~~~~~ 405 (471)
.....+++.+.+.++..+++. ..++++...+++++.++++.+.|.+++|+.+..+.. +.++.+.++..
T Consensus 232 ~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 302 (382)
T TIGR03403 232 GRRSGTLNVPYIVAMGEAMRL---ANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV------ 302 (382)
T ss_pred CcccCCcChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC------
Confidence 112345778888788888865 355677888999999999999999988998876541 22445566532
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------------C-----CCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 406 GFGKIENSESLCRYLLDKAQVALVPGDAFG--------------D-----DTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 406 ~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--------------~-----~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
+..++...|. +.||.+..|+.+. . .+.||+|++. +++|++++++.|++++++
T Consensus 303 ------~~~~~~~~L~-~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 303 ------EGEAMLWDLN-KAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred ------CHHHHHHhhc-cCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5677887765 5599999876542 1 2579999997 899999999999998877
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
++
T Consensus 376 ~~ 377 (382)
T TIGR03403 376 LR 377 (382)
T ss_pred HH
Confidence 64
No 157
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=8.3e-27 Score=229.05 Aligned_cols=333 Identities=20% Similarity=0.217 Sum_probs=257.1
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHc-CC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GF--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~-~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+++++|++|+ ..+..++.+++++.+++.+ +. .+-....|+..+.+.+.+.+++++| .+..+++++|-...+
T Consensus 37 ~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g---~e~al~f~SGy~AN~ 113 (388)
T COG0156 37 DGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG---AEAALLFSSGFVANL 113 (388)
T ss_pred CCceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEcccchhHH
Confidence 367899999999 7888888899999999876 22 1111236777777777777777777 556777888877655
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcc
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTG 242 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG 242 (471)
. ++.+|++++|.|+.+.-.|.+..+.+++.+++++.+.. .|+++|++.+.+ +.++|++...-.+.|
T Consensus 114 ~-~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdG 185 (388)
T COG0156 114 G-LLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEGVFSMDG 185 (388)
T ss_pred H-HHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEeccccCCC
Confidence 5 78899999999999999999999999999999999985 388999999865 246677788889999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEcCHHHH
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i 321 (471)
.+.| +++|++++++| ++++++||+|+..++++.+......+... .+..|.++||||+||..| ||+.++..++
T Consensus 186 diAp---L~~l~~L~~ky-~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~ 258 (388)
T COG0156 186 DIAP---LPELVELAEKY-GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALI 258 (388)
T ss_pred CcCC---HHHHHHHHHHh-CcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHH
Confidence 9999 99999999999 99999999999999886555444333222 356899999999999999 9999999999
Q ss_pred HHHHHHHhcccC--CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCc
Q 012095 322 AACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTY 399 (471)
Q Consensus 322 ~~l~~~~~~~~~--~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~ 399 (471)
+.+....+++.+ +.++....++.++|+. .......+++++++..++...+... |+.+.+....+ +.+.+.+.
T Consensus 259 d~L~~~ar~~ifStalpP~~aaa~~~al~~----l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~~s~s~I-~pv~~gd~ 332 (388)
T COG0156 259 DYLRNRARPFIFSTALPPAVAAAALAALRI----LEEGPERRERLQELAAFFRSLLKAL-GLVLLPSESPI-IPVILGDE 332 (388)
T ss_pred HHHHHhCCceeccCCCCHHHHHHHHHHHHH----HHhCHHHHHHHHHHHHHHHHHHHhc-CCccCCCCCCe-eeeEeCCH
Confidence 999887555433 3455555566667764 2334566777777777777555554 66654444444 55555432
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
..+.++...|+++ ||++.+......+ ..+|+++.. ++++|+.+++.|.++
T Consensus 333 -----------~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 333 -----------ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -----------HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 1477889999988 9999998877654 589999987 999999999988764
No 158
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=6.3e-27 Score=236.14 Aligned_cols=341 Identities=14% Similarity=0.113 Sum_probs=235.0
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC-C---C----CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF-T---R----YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~---~----Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+|.--.-.-++++.+.+++.+...... . . +.......++++.+++++ | .+++++++|+++++
T Consensus 20 ~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~----g----~~~~~~~~g~t~a~ 91 (387)
T PRK09331 20 FINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL----G----MDEARVTHGAREGK 91 (387)
T ss_pred ccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh----C----CCcEEEeCCHHHHH
Confidence 45544333333457888899888763211 0 1 111223567777777775 4 24688999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-------CCcEEEEcCCCCCc
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-------KSRLLILCSPSNPT 241 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-------~~~~i~i~~p~NPt 241 (471)
..++.+++++||.|+++.++|.+....++..|++++.++.+.+.++.+|++++++++++ ++++|++++|+|||
T Consensus 92 ~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~t 171 (387)
T PRK09331 92 FAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNY 171 (387)
T ss_pred HHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCC
Confidence 99999999999999999999888888889999999999984334577999999998863 68899999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i 321 (471)
|...+ +++|+++|++| |+++++|++|..... ...... .+..+++.|++|+++ .+.++||++++++++
T Consensus 172 G~~~~---l~~I~~la~~~-g~~livD~a~~~g~~----~~~~~~----~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i 238 (387)
T PRK09331 172 GNLAD---AKKVAKVAHEY-GIPFLLNGAYTVGRM----PVDGKK----LGADFIVGSGHKSMA-ASAPSGVLATTEEYA 238 (387)
T ss_pred ccccc---HHHHHHHHHHc-CCEEEEECCcccCCc----CCCHHH----cCCCEEEeeCccccc-CCCCEEEEEECHHHH
Confidence 99998 99999999999 999999999985221 111111 244588999999997 566999999999998
Q ss_pred HHHHHHHhcc--------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC--CCcceE
Q 012095 322 AACNKIQSQF--------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE--PQGAFY 391 (471)
Q Consensus 322 ~~l~~~~~~~--------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~--p~~g~~ 391 (471)
+.+.+....+ ..+.++....++.++++. ..+.+. ..++..++++++.+.|.+++|+++.. +....+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~---~~~~~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i 314 (387)
T PRK09331 239 DKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH---VVERVK-RWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDL 314 (387)
T ss_pred hhcccccCCCcccceeeeceecCchHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCe
Confidence 8876543211 112222233334444432 123332 34455667778999999998988773 222333
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhCCCC
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRPGV 469 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~~~~ 469 (471)
+.++.|.... ... .......++.+.|.++ ||...+. +....+|+.... ++++++++++.|+++++++..++
T Consensus 315 ~~~~~~~~~~-~~~--~~~~~~~~~~~~L~~~-gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~~~~~ 386 (387)
T PRK09331 315 MKFETPSFDE-IAK--KHKRRGFFLYEELKKR-GIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIAEKYGLEV 386 (387)
T ss_pred EEEeCCchhH-Hhh--hccccchhHHHHHHHc-CceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHHHhcCCCC
Confidence 4555552100 000 0011346788888765 9985432 224567777744 99999999999999998876554
No 159
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=1.4e-27 Score=243.99 Aligned_cols=348 Identities=18% Similarity=0.217 Sum_probs=240.4
Q ss_pred hcCCCeEEcCCCCCCC--C-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEPDF--D-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~--~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|.... + .++.+.+++.+++.+....+.+..+..+|+++|++++. ..+++++++|+++++
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGseA~ 117 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGTEAT 117 (423)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHHHHH
Confidence 3688999999998553 3 37899999999998754323366678889999988752 236899999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHH---cCCEEEEecCCCC-------CCCc---CCHHHHHhhhc---cCCc
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRIS-------ENFL---LDPKVLESKLT---EKSR 230 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~-------~~~~---ld~e~l~~~l~---~~~~ 230 (471)
..+++... ...++|+..+++|+++...+.. .|......+..+. +.+. .|+++++++++ ++++
T Consensus 118 e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~a 197 (423)
T TIGR00713 118 MSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIA 197 (423)
T ss_pred HHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEE
Confidence 99888642 2458999999999997654332 1111111111100 0000 17899999886 4677
Q ss_pred EEEE-cCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 231 LLIL-CSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 231 ~i~i-~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
+|++ +.|+| +|.+.+ ++.+++|.++|++| ++++|+||+|.++.++.........+. .+ +.+|||.++ +|
T Consensus 198 avi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~r~g~~~~~~~~~~~--pD----i~t~sK~l~-~G 268 (423)
T TIGR00713 198 GVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY-GSLLIFDEVMTGFRVALGGAQEYFGVE--PD----LTTLGKIIG-GG 268 (423)
T ss_pred EEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh-CCEEEEEccccccccCcchhHHHhCCC--cc----hhhhhhhhc-CC
Confidence 8877 57888 788877 68999999999999 999999999998855322111122222 12 347999999 99
Q ss_pred hhheeeEcCHHHHHHHHH---HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-e
Q 012095 309 WRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S 384 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~---~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~ 384 (471)
+|+||+++++++++.+.. .....+++.+++++.++.++|+.... ..+++.+++..+..++.+.+.+.+. ++.. .
T Consensus 269 ~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v 346 (423)
T TIGR00713 269 LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDE-EGVYTELDELAKRLAEGLSEVLEDT-GIPHTV 346 (423)
T ss_pred CceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Confidence 999999999999998863 22345678999999999999875221 3467778888888888888888776 5443 2
Q ss_pred CCCcceE-EeEecCCccCCcccCCCCCCC---HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 385 EPQGAFY-LFIDFSTYYGSEAEGFGKIEN---SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 385 ~p~~g~~-~~~~~~~~~~~~~~~~~~~~~---~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
...|+|+ +++..+..... .. ....+ ...+++.|+++ ||.+.++ .| +.+|+++..+++++++++++|.+
T Consensus 347 ~~~g~~~~v~~~~~~~~~~-~~--~~~~~~~~~~~~~~~l~~~-Gv~v~~~-~~---~~~~l~~~~t~~~i~~~~~~l~~ 418 (423)
T TIGR00713 347 NRVGSMFSLFFTEEEVTNY-AD--AKKSDTELFAKFFHEMLDK-GVFLPPS-QF---EACFLSAAHTEEDIENTIEAAEE 418 (423)
T ss_pred EeeccEEEEEEecCCCCCh-hh--hhcccHHHHHHHHHHHHHC-CeEEecC-Cc---cceeeECCCCHHHHHHHHHHHHH
Confidence 3445543 33443211000 00 00001 23677788875 9998764 23 35899988899999999999999
Q ss_pred HHHhh
Q 012095 461 GLLTL 465 (471)
Q Consensus 461 ~l~~~ 465 (471)
+++++
T Consensus 419 ~l~~~ 423 (423)
T TIGR00713 419 VFAEL 423 (423)
T ss_pred HHhhC
Confidence 98653
No 160
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=3.3e-27 Score=239.04 Aligned_cols=327 Identities=16% Similarity=0.180 Sum_probs=231.4
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|... ++. +|.+.+++.+++.+..... . ....+....+++.+.+..+ .+.+++++++++++.
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~-~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGseA~e 111 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS-R-AFHSDQLGPWYEKVAKLTG----KDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc-c-ccCCHHHHHHHHHHHhcCC----CCeEEEcCChHHHHH
Confidence 68889999888633 443 7899999999887632211 1 1123444556666654433 368999999999999
Q ss_pred HHHHHhcC---------CC-CeEEEcCCCCCChH-HHHHHcCCE------------EEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVCS---------PG-DEVIIPAPFWVSYP-EMARIADAT------------PVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~~---------~g-d~Vlv~~p~y~~~~-~~~~~~G~~------------~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++.... +| +.|+..+.+|++.. ......+.. +..++. .|++.+++.++
T Consensus 112 ~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~ 184 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAAIT 184 (396)
T ss_pred HHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHhcc
Confidence 88887631 44 67888877777654 333333321 112221 27899999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 227 EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~-~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
+++++|+++.++||||.+++.+ .+++|.++|++| ++++|+||+|.++...+... . .... +...-+.+|||.+|
T Consensus 185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~-~-~~~~---~~~pdi~~~sK~lg 258 (396)
T PRK04073 185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE-NVLFIADEIQTGLGRTGKLF-A-CDWD---NVTPDMYILGKALG 258 (396)
T ss_pred cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcCcHHH-H-hhhc---CCCCCEEEeccccc
Confidence 8888888898999999988764 699999999999 99999999999865443211 1 1111 11122446899999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC--CCCee
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL--EGVKM 383 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~--~g~~~ 383 (471)
++|+|+||+++++++++.+.......+++.+++++.++.++|+.. ++ ..+.++.+++++++.+.|+++ +++..
T Consensus 259 ~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~---~~--~~l~~~~~~~~~~l~~~L~~l~~~~i~~ 333 (396)
T PRK04073 259 GGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVL---EE--EKLPERSLELGEYFKEQLKEIDNPMIKE 333 (396)
T ss_pred CCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 888999999999999998865445567778999999999999741 11 234456677788888888875 23444
Q ss_pred eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~i~~~~~~l~~~ 461 (471)
..+.| .|++++++. +..+++++|+++ ||.+.+.. +++||+++ ..+++++++++++|+++
T Consensus 334 ~~~~g-~~~~~~~~~-------------~~~~~~~~l~~~-Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 334 VRGRG-LFIGVELNE-------------PARPYCEALKEE-GLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAV 394 (396)
T ss_pred eecce-EEEEEEecc-------------hHHHHHHHHHHC-CeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 44554 557788752 467889988875 99997732 46899995 45999999999999987
Q ss_pred H
Q 012095 462 L 462 (471)
Q Consensus 462 l 462 (471)
+
T Consensus 395 l 395 (396)
T PRK04073 395 L 395 (396)
T ss_pred h
Confidence 5
No 161
>PLN02242 methionine gamma-lyase
Probab=99.96 E-value=1.7e-27 Score=240.77 Aligned_cols=222 Identities=22% Similarity=0.291 Sum_probs=178.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH-----HHcCCEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIADATPV 204 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~G~~~~ 204 (471)
+++-..+|++.+++++ | .+.+++++|+++++..++.+++++||+|+++.|.|..+...+ +..|++++
T Consensus 74 ~~Pt~~~LE~~lA~l~----g----~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 74 FNPTVLNLGRQMAALE----G----TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred CChhHHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 4555677888888775 3 357789999999999999999999999999999998887654 45788887
Q ss_pred EecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc
Q 012095 205 ILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (471)
.++. .|++++++++++ ++|+|++++|+||||.+++ +++|+++|++| +++||+|++|..+.+..
T Consensus 146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-gi~livDea~~~~~~~~----- 209 (418)
T PLN02242 146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEK-GVTVVVDNTFAPMVLSP----- 209 (418)
T ss_pred EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHh-CCEEEEECCCCccCCCH-----
Confidence 7764 289999999987 5999999999999999998 89999999999 99999999998765421
Q ss_pred cccCCCCCCceEEEecCCcccCccchh-heeeEcCHHHHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHH
Q 012095 284 FASLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (471)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~g~~G~R-~G~v~~~~~~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~ 360 (471)
.. .+..|++.||||.++.+|++ .||+++++++++.+...+.. ...+++...|.++..++.. ..+...
T Consensus 210 -~~----~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l-----~tl~~r 279 (418)
T PLN02242 210 -AR----LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERL-----PHLSLR 279 (418)
T ss_pred -HH----cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC-----CcHHHH
Confidence 11 13559999999999889988 59999999999998876542 3445666677777666543 345667
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 361 VKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 361 ~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
++++.++++.+.+.|++. ++++..|
T Consensus 280 ~~~~~~~a~~la~~L~~~-~~~V~yP 304 (418)
T PLN02242 280 MKEHCRRAMEYAKRMKEL-GLKVIYP 304 (418)
T ss_pred HHHHHHHHHHHHHHHHhC-CCEEECC
Confidence 789999999999999998 5665543
No 162
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=9.5e-27 Score=233.72 Aligned_cols=302 Identities=16% Similarity=0.160 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCC
Q 012095 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRISEN 213 (471)
Q Consensus 136 ~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~ 213 (471)
+..+.+.+.+++..|.+-+.+.|+++.|+++++..++..+..+||.|++..++|.+. ...++..|++++.++.+. +
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~--~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE--D 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC--C
Confidence 445555555555566432235688999999999999999999999999988877665 377888999999999863 3
Q ss_pred CcCCHHHHHhhhcc--CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 214 FLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 214 ~~ld~e~l~~~l~~--~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
+.+|++++++++++ +++++++++|+||||...+ +++|.++|+++ ++++|+|+++.. +.....+.. +
T Consensus 115 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~-~~~livDa~~~~----g~~~~~~~~----~ 182 (368)
T PRK13479 115 EPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRH-GKRLIVDAMSSF----GAIPIDIAE----L 182 (368)
T ss_pred CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHc-CCEEEEEccccc----CCccccccc----c
Confidence 56899999999864 4567889999999999999 88999999999 999999966532 221222222 2
Q ss_pred CceEEEecCCccc-CccchhheeeEcCHHHHHHHHHHHh-----------------cccCCCChHHHHHHHHHHhccCCC
Q 012095 292 ERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQS-----------------QFTSGASSISQKAGVAALGLGYAG 353 (471)
Q Consensus 292 ~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~~~-----------------~~~~~~~~~~q~aa~~~L~~~~~~ 353 (471)
+..+++.|++|.+ |.+| +||+++++++++.+..... ...++++...+.++.++++.-. .
T Consensus 183 ~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~-~ 259 (368)
T PRK13479 183 GIDALISSANKCIEGVPG--FGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELE-E 259 (368)
T ss_pred CceEEEecCccccccCCC--ceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHH-H
Confidence 3347778999976 6677 6999999998887654321 1123566666666666665310 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC---cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012095 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 430 (471)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p 430 (471)
..++++..++++++++++.+.|.++ |+++..+. .+..+.+.++...+ .+..++.++|.++ ||.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~L~~~-gi~v~~ 328 (368)
T PRK13479 260 EGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPA---------YDFKEFYERLKEQ-GFVIYP 328 (368)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCC---------cCHHHHHHHHHHC-CEEEec
Confidence 2346777889999999999999988 87764331 22223333332100 1567889988776 999999
Q ss_pred CCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 431 GDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 431 g~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
|..+ ..+++|++... ++++++++++.|+++++++.
T Consensus 329 g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 329 GKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8654 34689998644 89999999999999998764
No 163
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.96 E-value=8.3e-27 Score=233.08 Aligned_cols=288 Identities=17% Similarity=0.207 Sum_probs=206.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~ 201 (471)
.+| +++...+|++.++++. |. +..++++|+++++..++ .++++||+|++++|.|++.. ..++..|+
T Consensus 47 ~r~-~~pt~~~le~~la~l~----g~----~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~ 116 (366)
T PRK08247 47 SRT-GNPTRGVLEQAIADLE----GG----DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNV 116 (366)
T ss_pred cCC-CCchHHHHHHHHHHHh----CC----CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCc
Confidence 344 4455677888888875 32 23577888889998765 57899999999999999754 34556899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
+++.++. .|++.+++++++++++|++++|+||+|.. .++++|+++|++| +++||+|++|......
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~-g~~lIvD~t~~~~~~~---- 181 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKH-GLLLIVDNTFYTPVLQ---- 181 (366)
T ss_pred eEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHc-CCEEEEECCCcccccc----
Confidence 9998875 38999999998899999999999998754 4599999999999 9999999999532111
Q ss_pred cccccCCCCCCceEEEecCCcccCc-cchhheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
. +...+..++++|+||.++- ++.+.||++++ +++++.+...+...+.+++++.|.++...|+. +..
T Consensus 182 ~-----p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-------l~~ 249 (366)
T PRK08247 182 R-----PLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-------LAL 249 (366)
T ss_pred C-----chhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-------HHH
Confidence 1 1113456999999999962 34689999986 67888888777766677788887766665542 445
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCe-eeCC-CcceEEeEecCCccCCcccCCCCCCCHHHHHH---------HHHHcCCEEE
Q 012095 360 MVKAFRERRDFLVKSFGELEGVK-MSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCR---------YLLDKAQVAL 428 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~-~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~Ll~~~gV~v 428 (471)
..++++++++.+.+.|++.|++. +..| .||+|.| .+... .....|.+ .|.....+.+
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----------~~~~~~~~~l~~~~~~~slg~~~sl~~ 317 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----------EWVNPFLKSLKLITFAESLGGVESFIT 317 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----------HHHHHHHHcCCcceEccCCCCCceEEE
Confidence 55677999999999999998876 4444 8999887 55321 01112222 2222345677
Q ss_pred ECCCCCCC-------------CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 429 VPGDAFGD-------------DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 429 ~pg~~f~~-------------~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.|++.+.. ++.+|+|++.. +.+..++.|.+++..
T Consensus 318 ~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~ 364 (366)
T PRK08247 318 YPATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ 364 (366)
T ss_pred CCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 78765421 35799999883 445556666666654
No 164
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.96 E-value=5e-27 Score=239.42 Aligned_cols=355 Identities=12% Similarity=0.085 Sum_probs=239.3
Q ss_pred hcCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|...... ++.+.+++.+++.+....+.+..+.+ ....+++++....+.+.. +++++++++++++
T Consensus 38 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~ 115 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYE-PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAV 115 (425)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCH-HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHH
Confidence 368889999988755433 78999999999876433332323333 345788888776654332 4666666666766
Q ss_pred HHHHHHh---cCCCCeEEEcCCCCCChHHHHHHcCCEEEE----------------ecCCCCCCCcC--CHHHHHhhhc-
Q 012095 169 LQAVLAV---CSPGDEVIIPAPFWVSYPEMARIADATPVI----------------LPTRISENFLL--DPKVLESKLT- 226 (471)
Q Consensus 169 ~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~----------------v~~~~~~~~~l--d~e~l~~~l~- 226 (471)
..+++.. .++ ..|+...++|++....+...+..... +|.+. ++... +++.+++.+.
T Consensus 116 e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~~ 193 (425)
T PRK08088 116 ENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFKN 193 (425)
T ss_pred HHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHHh
Confidence 6665543 233 45666699999887666554432111 22111 11111 1456777774
Q ss_pred ----cCCcEEEEc-CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCC
Q 012095 227 ----EKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 227 ----~~~~~i~i~-~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
++..++++. ..+|+++...+++.+++|.++|++| ++++|+||+|.++.+.+. ...+.. .+.+..+.|||
T Consensus 194 ~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~-~~~lI~Dev~~g~g~~g~-~~~~~~----~~~~pdi~s~s 267 (425)
T PRK08088 194 DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH-GIMLIADEVQTGAGRTGT-LFAMEQ----MGVAADLTTFA 267 (425)
T ss_pred ccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcc-hhHHhh----cCCCCCEEEEe
Confidence 234455553 3378888899999999999999999 999999999998654432 111111 12334589999
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
|.++ +|+|+||+++++++++.+.......+++.+++.|.++.++|+.... +++++++++..+++++.+.+.+.+.|.+
T Consensus 268 K~l~-~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 345 (425)
T PRK08088 268 KSIA-GGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ-ENLLQKANALGEKLKDGLLAIAEKHPEI 345 (425)
T ss_pred cccc-CCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9998 9999999999999999987766667888999999999999986432 4567777766666666666655556443
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
....+. |+++|+.+.+....... ......++.+.++++ ||.+.|+..| .+.||++++. ++++|++++++|+
T Consensus 346 ~~v~g~-G~~~~l~l~~~~~~~~p---~~~~~~~l~~~~~~~-Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i~~l~ 418 (425)
T PRK08088 346 GDVRGL-GAMIAIELFEDGDHSKP---NAKLTAQIVARARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQGLEIIA 418 (425)
T ss_pred EEEecc-ceEEEEEEecCCCCCCC---CHHHHHHHHHHHHhC-CCEEecCCCC--CCEEEEECCCCcCHHHHHHHHHHHH
Confidence 333233 77799998432110000 001356788888776 9988886554 4789999994 7999999999999
Q ss_pred HHHHhh
Q 012095 460 KGLLTL 465 (471)
Q Consensus 460 ~~l~~~ 465 (471)
+++++.
T Consensus 419 ~~l~~~ 424 (425)
T PRK08088 419 QCFDEA 424 (425)
T ss_pred HHHHhh
Confidence 998764
No 165
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=3e-26 Score=230.30 Aligned_cols=348 Identities=15% Similarity=0.138 Sum_probs=242.8
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeC
Q 012095 83 ITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN 162 (471)
Q Consensus 83 ~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 162 (471)
+.+..+.+.+++.+.-.+ .|...-++.+.+.+++.+.+...........+..++.+.+.+.+++.+|. +..++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~~~~~~ 83 (371)
T PRK13520 7 ILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL--PDAYGYITS 83 (371)
T ss_pred HHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC--CCCCeEEec
Confidence 334444444455443332 33322334567788888877653221111245666667788888877784 456789999
Q ss_pred ChHHHHHHHHHHhcC----CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 163 GAKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 163 G~~~al~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
|+++++..+++++.. +||+|++.++.|.++...++..|++++.+|.+. ++.+|+++|+++++++++.|++++++
T Consensus 84 ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~vi~~~~~ 161 (371)
T PRK13520 84 GGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDDNTIGIVGIAGT 161 (371)
T ss_pred CcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhhCCEEEEEEcCC
Confidence 999999988877654 579999999999999999999999999999853 45689999999998888888888889
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc-C
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-P 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~ 317 (471)
|+||.+.+ +++|.++|+++ ++++++|++|..+...-........+.. .+-..+..|..|. +++|.++|+++. +
T Consensus 162 ~~tG~~~~---l~~I~~l~~~~-g~~livD~a~~~~~~~~~~~~~~~~~~~-~~vd~~~~s~~K~-~~a~~~~G~~~~~~ 235 (371)
T PRK13520 162 TELGQVDP---IPELSKIALEN-GIFLHVDAAFGGFVIPFLDDPPNFDFSL-PGVDSITIDPHKM-GLAPIPAGGILFRD 235 (371)
T ss_pred cCCcccCC---HHHHHHHHHHc-CCCEEEEecchhHHHHhhcCCCCccccC-CCCceEEECCccc-cCccCCceEEEEcC
Confidence 99999999 99999999999 9999999999865421101111111111 1223444567785 457889998775 6
Q ss_pred HHHHHHHHHHHhcc--------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCc
Q 012095 318 KHFVAACNKIQSQF--------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQG 388 (471)
Q Consensus 318 ~~~i~~l~~~~~~~--------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~ 388 (471)
+++++.+....... ..+.+.....++.++|+.- ..+.+++.+++..++++++.+.|.++ |++ +..|..
T Consensus 236 ~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 312 (371)
T PRK13520 236 ESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYL--GREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVL 312 (371)
T ss_pred HHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhh--cHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCc
Confidence 66777664211111 1112344555666666531 24556788889999999999999988 887 556666
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
++ +.++++ +..++.++|.++ ||.+.++. .++++|+|+.. ++++++++++.|+++++
T Consensus 313 ~~-v~~~~~--------------~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 313 NI-VAFDDP--------------NPDEVREKLRER-GWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred eE-EEEecC--------------CHHHHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 64 555654 467888888776 99887753 34689999874 89999999999998765
No 166
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.9e-26 Score=231.10 Aligned_cols=300 Identities=13% Similarity=0.128 Sum_probs=219.0
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh--HHHHHHcCCEEEEecCCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRIS 211 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~ 211 (471)
..++.+.+.+.+++..|.+-..++|++|+|+++++..++..++.+||.|++..+.+.+. ...++..|++++.++++.
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~- 111 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGE- 111 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCC-
Confidence 34455555555666666432234799999999999999999988988877765554443 466788999999999864
Q ss_pred CCCcCCHHHHHhhhcc--CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 212 ENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 212 ~~~~ld~e~l~~~l~~--~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
++.+|++.+++++++ +++++++++++||||..++ +++|.++|++| ++++|+|+++.. +.....+..
T Consensus 112 -~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~-g~~livD~~~~~----g~~~~~~~~--- 179 (363)
T TIGR02326 112 -VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRH-GKVTIVDAMSSF----GGIPIDIAE--- 179 (363)
T ss_pred -CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHc-CCEEEEEccccc----cCcccchhh---
Confidence 445899999999874 4577788999999999999 88999999999 999999988763 222222222
Q ss_pred CCCceEEEecCCccc-CccchhheeeEcCHHHHHHHHHH------------------HhcccCCCChHHHHHHHHHHhcc
Q 012095 290 MWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKI------------------QSQFTSGASSISQKAGVAALGLG 350 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~------------------~~~~~~~~~~~~q~aa~~~L~~~ 350 (471)
.+..+++.|++|.+ |.+| +||++++++.++.+... .....++++.+.+.++.++++.-
T Consensus 180 -~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l 256 (363)
T TIGR02326 180 -LHIDYLISSANKCIQGVPG--FGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLEL 256 (363)
T ss_pred -cCccEEEecCccccccCCc--ceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH
Confidence 23448889999987 4455 79999999888765310 01123456778888877777541
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC---CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEE
Q 012095 351 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 427 (471)
Q Consensus 351 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~ 427 (471)
. .+..+++..++++++++++.+.|+++ |+.+..+ .++...|+.++.... .+..++.+.|.++ ||.
T Consensus 257 ~-~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~L~~~-gi~ 324 (363)
T TIGR02326 257 E-KEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD---------YRFADFYQRLKEQ-GFV 324 (363)
T ss_pred H-HhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC---------CCHHHHHHHHHHC-CEE
Confidence 0 01236778899999999999999887 7766533 355567777764200 1556788887665 999
Q ss_pred EECCCCCCCCCcEEEEee-c-CHHHHHHHHHHHHHHH
Q 012095 428 LVPGDAFGDDTCIRISYA-A-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 428 v~pg~~f~~~~~iRis~~-~-~~e~i~~~~~~l~~~l 462 (471)
+.||..+. .++||+++. . +.++++++++.|++++
T Consensus 325 v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 325 IYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 99998663 479999964 3 8899999999999876
No 167
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=1.3e-26 Score=233.32 Aligned_cols=328 Identities=14% Similarity=0.148 Sum_probs=233.3
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCC--CC---CCC----CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 99 RLAAGEPDFDTPVLIAEAGINAIREGF--TR---YTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 99 ~l~~g~~~~~~p~~v~~a~~~~~~~~~--~~---Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|..+...+++|+.+.+++.+.+.+.. .+ |.. ..+..++|+.+++++ |.+ ..++|++|+|+++++.
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----~~~-~~~~v~~~~g~t~al~ 76 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF----NAP-SSAHVVFTNNATTALN 76 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh----CcC-CCCeEEEeCCHHHHHH
Confidence 466667777788899999988776532 22 221 134456666666665 432 3458999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
.++.+++++||+|+++.+.|.++.. .++..|.+++.++.+. ++.+|+++++++++++++++++++|+||||.++
T Consensus 77 ~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 77 IALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTIL 154 (376)
T ss_pred HHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccC
Confidence 9999999999999999999987653 4556699999998863 456899999999988999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH-HHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAAC 324 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~-i~~l 324 (471)
+ +++|.++|+++ ++++|+|++++.... ... +. ..+..+++.|++|.++.|. .+|.++..++. ++.+
T Consensus 155 ~---~~~i~~l~~~~-~~~livD~a~~~g~~----~~~---~~-~~~~D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~ 221 (376)
T TIGR01977 155 P---IEEIGELAQEN-GIFFILDAAQTAGVI----PID---MT-ELAIDMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPL 221 (376)
T ss_pred C---HHHHHHHHHHc-CCEEEEEhhhccCcc----CCC---ch-hcCCCEEEecccccccCCC-CceEEEEcCCcCcCce
Confidence 9 78899999999 999999999975321 111 11 1244588899999885332 35666554432 1111
Q ss_pred HH----H------------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-
Q 012095 325 NK----I------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ- 387 (471)
Q Consensus 325 ~~----~------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~- 387 (471)
.. . .+....+++.....++.++|+.- .+...+.++++.++..+.+.+.|.+++|+++..|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~--~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 299 (376)
T TIGR01977 222 KSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFI--EKIGIANIAKKECMLTEKLLNGLREINKVKIYGPAD 299 (376)
T ss_pred ecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Confidence 10 0 00111234555555555566531 12235667788888999999999988888876541
Q ss_pred ---cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----------CCCcEEEEeec--CHHHHH
Q 012095 388 ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----------DDTCIRISYAA--SLTTLQ 452 (471)
Q Consensus 388 ---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----------~~~~iRis~~~--~~e~i~ 452 (471)
.+..+++.+++. +..++.+.|.+++||.+..|..+. ..+.||+++.. ++++++
T Consensus 300 ~~~~~~~v~~~~~~~------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~ 367 (376)
T TIGR01977 300 PANRVGVVSFTVEGI------------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIE 367 (376)
T ss_pred ccccCCeEEEEECCC------------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHH
Confidence 133466677642 677888888776699999987553 24789999987 899999
Q ss_pred HHHHHHHH
Q 012095 453 AAVERIKK 460 (471)
Q Consensus 453 ~~~~~l~~ 460 (471)
.++++|++
T Consensus 368 ~~~~~l~~ 375 (376)
T TIGR01977 368 KLLEALSE 375 (376)
T ss_pred HHHHHHhh
Confidence 99999875
No 168
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.96 E-value=1.3e-26 Score=231.21 Aligned_cols=308 Identities=19% Similarity=0.198 Sum_probs=221.7
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--------
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD-------- 180 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd-------- 180 (471)
+|+++++++.++..+ |. +..++++++++++++.+|. +++++|+|+++++..++++++++||
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~----~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~ 93 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGV----EDAVIVSSASAGIAQSVAAVITRGNRYLVENLH 93 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCC----CeEEEEcCHHHHHHHHHHHHhcCCCcchhhccc
Confidence 588999999988643 42 4578999999999888873 4789999999999999999999998
Q ss_pred -------eEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE-EcCCCCCcccCCCHH
Q 012095 181 -------EVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI-LCSPSNPTGSVYPKN 248 (471)
Q Consensus 181 -------~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~-i~~p~NPtG~~~~~~ 248 (471)
+|+++.|.|..| ...+...|++++.++.+ +.+|+++++++++++|++++ +++|+||+|.+.+
T Consensus 94 ~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~-- 167 (363)
T TIGR01437 94 DSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLS-- 167 (363)
T ss_pred ccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCC--
Confidence 999999888766 56788899999999762 35899999999999999776 6889999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
+++|+++|++| |+++|+|++|..- ...+..+ +..+++.|++|.+ +|++.||+++++++++.+....
T Consensus 168 -~~~i~~~a~~~-gi~vivD~a~~~~------~~~~~~~----g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~~~ 233 (363)
T TIGR01437 168 -VEDAAQVAQEH-NLPLIVDAAAEED------LQKYYRL----GADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKLQS 233 (363)
T ss_pred -HHHHHHHHHHc-CCeEEEECCCCCc------hHHHHHc----CCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHhcc
Confidence 78899999999 9999999999721 0111122 2347889999976 6889999999988888764322
Q ss_pred hccc--CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC--cce--E-EeEecCCccC
Q 012095 329 SQFT--SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAF--Y-LFIDFSTYYG 401 (471)
Q Consensus 329 ~~~~--~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~--~g~--~-~~~~~~~~~~ 401 (471)
.... .........+..++++. ..++..+..+.+.++++.+.+.|.+++|+.+..+. .+. + .-+.+...
T Consensus 234 ~~~~~~~~~~~~~~~gl~aAl~~---~~~~~~~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~-- 308 (363)
T TIGR01437 234 KGIGRAMKVGKENILGLTAALEQ---YLSTGKESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDES-- 308 (363)
T ss_pred CCCcceeccCHHHHHHHHHHHHH---HHccCcccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEecc--
Confidence 1110 01111222333334432 11222234445556777899999999998876322 111 1 11222210
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCC--EEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHH
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQ--VALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~g--V~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~ 461 (471)
..+ .+..++.+.|.++ + |.+++ .|...+.+|+++.. +++|++.++++|.++
T Consensus 309 --~~g----~~~~~l~~~L~~~-~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 309 --ELG----MTAADVVQALRQG-EPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIREI 362 (363)
T ss_pred --CCC----CCHHHHHHHHhcC-CCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHHh
Confidence 001 2678999987653 5 66655 46677899999988 889999999999875
No 169
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=3.7e-26 Score=230.33 Aligned_cols=319 Identities=16% Similarity=0.150 Sum_probs=227.4
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCC-----CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc---CCCC
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAG-----TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC---SPGD 180 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G-----~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~---~~gd 180 (471)
+|+.+.+++.+.+.+ ...|+.... ..+..+.+.+.+.+.+|. ++++|++|+|+++++..++..++ .+||
T Consensus 11 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~--~~~~i~~t~~~t~a~~~al~~~~~~~~~~~ 87 (379)
T TIGR03402 11 VDPEVLEAMLPYFTE-YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGA--EPDEIIFTSGGTESDNTAIKSALAAQPEKR 87 (379)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEeCcHHHHHHHHHHHHHHhcCCCC
Confidence 467889998887754 223322111 122333444555555664 57899999999999998888764 4568
Q ss_pred eEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 012095 181 EVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV 257 (471)
Q Consensus 181 ~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~ 257 (471)
.|++....|+++... ++..|++++.+|.+. ++.+|++++++.++++++++++++++||||.+++ +++|.++|
T Consensus 88 ~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~~I~~l~ 162 (379)
T TIGR03402 88 HIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IEEIGEIA 162 (379)
T ss_pred eEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HHHHHHHH
Confidence 999999888776543 344699999999863 3568999999999989999999999999999999 77899999
Q ss_pred HhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH-H------Hhc
Q 012095 258 AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-I------QSQ 330 (471)
Q Consensus 258 ~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~-~------~~~ 330 (471)
++| |+++++|+++.. +.....+.. .+-.+++.|.+|.+|.+| +|+++.+++.. +.. . ...
T Consensus 163 ~~~-g~~vivD~~~~~----g~~~~~~~~----~~~D~~~~s~~K~~gp~G--~g~l~v~~~~~--~~p~~~g~~~~~~~ 229 (379)
T TIGR03402 163 KER-GALFHTDAVQAV----GKIPIDLKE----MNIDMLSLSGHKLHGPKG--VGALYIRKGTR--FRPLLRGGHQERGR 229 (379)
T ss_pred HHc-CCEEEEECcccc----cccccCccc----CCCCEEEEcHHHcCCCCc--eEEEEECCCCC--CCCcccCCccCCCc
Confidence 999 999999999974 222222222 233477778889777556 88887765431 110 0 001
Q ss_pred ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCC----cc-eEEeEecCCccCCcc
Q 012095 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQ----GA-FYLFIDFSTYYGSEA 404 (471)
Q Consensus 331 ~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~----~g-~~~~~~~~~~~~~~~ 404 (471)
...+++.....++.++++. ..+++++..+++++.++++.+.|.+ ++++.+..+. .+ +.+|+ +..
T Consensus 230 ~~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----- 299 (379)
T TIGR03402 230 RAGTENVPGIVGLGKAAEL---ATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISF--EYI----- 299 (379)
T ss_pred CCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEe--cCC-----
Confidence 1234566666666777765 3567888888999999999999985 8888776542 12 22333 321
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 405 EGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
+..++...| +++||.+..|..|.. .+.+|+|++. +++||+++++.|+++++
T Consensus 300 -------~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~ 371 (379)
T TIGR03402 300 -------EGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA 371 (379)
T ss_pred -------CHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 567888866 456999999876532 2689999997 88999999999999987
Q ss_pred hhC
Q 012095 464 TLR 466 (471)
Q Consensus 464 ~~~ 466 (471)
+++
T Consensus 372 ~~~ 374 (379)
T TIGR03402 372 RLR 374 (379)
T ss_pred HHH
Confidence 754
No 170
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=2.8e-25 Score=222.34 Aligned_cols=331 Identities=22% Similarity=0.257 Sum_probs=248.7
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC--CC---CCCCCC----CCHHHHHHHHHHHHHHhCCCCC-CCcEEEeCC
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG--FT---RYTPNA----GTLELRSAICHKLKEENGLSYT-PDQILVSNG 163 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~--~~---~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~-~~~i~it~G 163 (471)
+++++.|....... .|..+.+++.+..... .. .|.... -+.+.|+.+++++ | .+ .++|++|.|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~----~--a~~~~eIvft~~ 92 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL----N--ADSSDEIVFTRG 92 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh----C--CCCCCeEEEeCC
Confidence 56788888887665 6888999998876431 11 222222 2344555555555 4 34 489999999
Q ss_pred hHHHHHHHHHHh---cCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 AKQSILQAVLAV---CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
+|++|+.+..++ ..+||+|++.+-.|++. ...++..|++++.+|+++ ++.++.+.++..++++||++.+++
T Consensus 93 tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~--~g~~~~~~~~~~i~~~Tklvais~ 170 (405)
T COG0520 93 TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD--DGLLDLDALEKLITPKTKLVALSH 170 (405)
T ss_pred hhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC--CCCcCHHHHHHhcCCCceEEEEEC
Confidence 999999999998 68999999999888754 355666799999999973 456899999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc-ccCccchhheeeE
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK-AFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~g~~G~R~G~v~ 315 (471)
.+|.||.+.| +++|+++|+++ ++++++|.+++. ++....+.. .+..+++.|..| .+|-.| +|.++
T Consensus 171 vSn~tG~~~p---v~~I~~la~~~-ga~v~VDaaq~~----~h~~idv~~----l~~Df~afsgHKwl~gP~G--iGvLy 236 (405)
T COG0520 171 VSNVTGTVNP---VKEIAELAHEH-GALVLVDAAQAA----GHLPIDVQE----LGCDFLAFSGHKWLLGPTG--IGVLY 236 (405)
T ss_pred ccccccccch---HHHHHHHHHHc-CCEEEEECcccc----CccCCCchh----cCCCEEEEcccccccCCCc--eEEEE
Confidence 9999999999 99999999999 999999999875 333333332 355699999999 666336 99999
Q ss_pred cCHHHHHHHHHH----------------------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Q 012095 316 GPKHFVAACNKI----------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (471)
Q Consensus 316 ~~~~~i~~l~~~----------------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (471)
+++++++.+.-. .+.....++.....++.++++.- .+..++.+.++.++..+++.+
T Consensus 237 ~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~--~~ig~~~i~~~e~~L~~~~~~ 314 (405)
T COG0520 237 VRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYL--LEIGMEAIEAHERELTEYLLE 314 (405)
T ss_pred EchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHH--HHHhHHHHHHHHHHHHHHHHH
Confidence 999999887210 11112234444444445556531 123367788888899999999
Q ss_pred HhcCCCCCeeeCCC----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEE
Q 012095 374 SFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIR 441 (471)
Q Consensus 374 ~L~~~~g~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--------~~~iR 441 (471)
.|+++|+++++.|. ++. +.+.++.. .+.+++..|-++ ||.++.|..+.. +..+|
T Consensus 315 ~L~~~~~v~i~g~~~~~r~~~-vsF~v~~~------------~~~dv~~~L~~~-gI~vr~g~~ca~p~~~~~~~~~~iR 380 (405)
T COG0520 315 GLSELPGVEIYGPPDADRGGI-VSFNVKGI------------HPHDVATLLDEK-GIAVRAGHHCAQPLHRLLGVDATIR 380 (405)
T ss_pred HHhcCCCeEEecCCcccCceE-EEEEeCCC------------CHHHHHHHHHhC-CeEEEeccccccHHHHhcCCCCceE
Confidence 99999999998764 444 55566643 688999987766 799999976642 35699
Q ss_pred EEeec--CHHHHHHHHHHHHHHHH
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~ 463 (471)
+|++. ++||++++++.|+++.+
T Consensus 381 ~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 381 ASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEeecCCHHHHHHHHHHHHHHhh
Confidence 99997 99999999999998764
No 171
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.95 E-value=3.2e-26 Score=231.08 Aligned_cols=220 Identities=14% Similarity=0.191 Sum_probs=171.1
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCC
Q 012095 128 YT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 201 (471)
Q Consensus 128 Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 201 (471)
|+ +.++..+|+++++++++ .+++++++|+++++..++.+++++||+|+++.|.|..+... ++..|+
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 129 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGV 129 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCe
Confidence 55 77889999999999963 24678889999999999999999999999999999876543 477899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCeEEEEccCCCccccCCCC
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPAT 280 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~~ii~De~y~~~~~~~~~ 280 (471)
+++.++.. |++++++++++++++|++++|+||||.+.+ +++|.++|+++ +++++|+|++|....+..
T Consensus 130 ~v~~vd~~-------d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~~-- 197 (400)
T PRK06234 130 EVTFVDTS-------NLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQR-- 197 (400)
T ss_pred EEEEECCC-------CHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcCC--
Confidence 99998752 899999999989999999999999999999 88889999985 379999999998754321
Q ss_pred ccccccCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHHHHHHH--HhcccCCCChHHHHHHHHHHhccCCChHHH
Q 012095 281 HTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (471)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~~l~~~--~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~ 357 (471)
++ . .+..+++.|+||.++++|+|+ ||+++++++++.++.. ...++.+.+++....+...|+. +
T Consensus 198 --~l-~----~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t-------l 263 (400)
T PRK06234 198 --PL-Q----LGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT-------L 263 (400)
T ss_pred --ch-h----hCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-------H
Confidence 11 1 244599999999998889886 9999999998887653 3334555666665544444432 3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 358 SKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
....++..++...+.+.|++.|.+
T Consensus 264 ~~r~~~~~~na~~~a~~L~~~~~V 287 (400)
T PRK06234 264 QIRMEKHCKNAMKVAKFLESHPAV 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCe
Confidence 344455556777777788776544
No 172
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=3.6e-26 Score=232.07 Aligned_cols=330 Identities=15% Similarity=0.154 Sum_probs=228.6
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|...... ++.+.+++.+++.+..... +. -..+....+++.+.+..| .+.+++++++++++.
T Consensus 39 ~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~-~~-~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 112 (401)
T PRK00854 39 DGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS-RA-FRNDQLAPLYEELAALTG----SHKVLPMNSGAEAVE 112 (401)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc-cc-cCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 57789999888654443 7889999999887632211 11 112344445555544444 358999999999999
Q ss_pred HHHHHhcC---------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVCS---------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~~---------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++++.. +| +.|++..-+|++....+...+. .+..++. .|++.+++.+.
T Consensus 113 ~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~ 185 (401)
T PRK00854 113 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEAAIT 185 (401)
T ss_pred HHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 99988742 24 6788887777765433332222 1222221 38999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCH-HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc-ccccCCCCCCceEEEecCCccc
Q 012095 227 EKSRLLILCSPSNPTGSVYPK-NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~-~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
+++++|++++|+||+|.++++ +++++|.++|++| ++++|+||+|.++.+.|.... ...... .+ +++ +||.+
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~-gi~lI~DEv~~g~g~~g~~~~~~~~g~~--~D--~~~--~~K~l 258 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN-NVTLILDEIQTGLGRTGKLLAEEHEGIE--AD--VTL--IGKAL 258 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCchHhHHhhcCCC--CC--EEE--ecccc
Confidence 899999999999999999974 5699999999999 999999999987644432110 011111 12 222 47999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC--Ce
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VK 382 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g--~~ 382 (471)
+-..||+||+++++++++.+.......+++.+++.+.++.++|+. .++ ....+.++++.+++.+.|+++.. +.
T Consensus 259 ~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~---l~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 333 (401)
T PRK00854 259 SGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV---LTE--EGMIENAAEMGAYFLEGLRSIRSNIVR 333 (401)
T ss_pred cCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH---HHH--cCHHHHHHHHHHHHHHHHHhhccCceE
Confidence 733379999999999999876544555667899999999999874 111 33567888888999999887621 12
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~ 460 (471)
...+.|.++.+...++. .+..++++.|+++ ||.+.+.. .+++|+++. .++++|++++++|++
T Consensus 334 ~~~g~g~~~~i~~~~~~-----------~~~~~~~~~L~~~-GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~~ 397 (401)
T PRK00854 334 EVRGRGLMLAVELEPEA-----------GGARQYCEALKER-GLLAKDTH----DHTIRLAPPLVITREQVDWALEQIAK 397 (401)
T ss_pred EEeccceEEEEEEecCc-----------hhHHHHHHHHHHC-CeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 23455666554332321 1467899998876 99987632 369999975 499999999999998
Q ss_pred HHH
Q 012095 461 GLL 463 (471)
Q Consensus 461 ~l~ 463 (471)
++.
T Consensus 398 ~l~ 400 (401)
T PRK00854 398 VLA 400 (401)
T ss_pred Hhh
Confidence 864
No 173
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.95 E-value=1.6e-25 Score=227.13 Aligned_cols=342 Identities=14% Similarity=0.152 Sum_probs=236.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+|+.+++.+.. .++. ....+....+++.+.+..+ .+.+++++++++++.
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~-~~~~~~~~~la~~l~~~~~----~~~v~~~~sGseA~e 110 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFW-HTGN-GYTNEPVLRLAKKLIDATF----ADRVFFCNSGAEANE 110 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcc-cccC-ccCCHHHHHHHHHHHhhCC----CCeEEEcCCcHHHHH
Confidence 678899998864 33443 7889999999886522 1211 1223444556666654433 369999999999999
Q ss_pred HHHHHhc--------CCCCeEEEcCCCCCChHHHHHHcCCEEEE----ecCCCC--CCCcCCHHHHHhhhccCCcEEEEc
Q 012095 170 QAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADATPVI----LPTRIS--ENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 170 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~----v~~~~~--~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
.+++... ...+.|+..+.+|++....+...+..... .++.+. ...-.|++.+++.+.+++++|++
T Consensus 111 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii- 189 (406)
T PRK12381 111 AALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV- 189 (406)
T ss_pred HHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-
Confidence 9988752 13467999999999877544433332110 011110 00113889999999877777777
Q ss_pred CCCCCcccCC--CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 236 SPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 236 ~p~NPtG~~~--~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+|.|++|-++ +.+.+++|.++|++| ++++|+||+|.++.+.|.. ..........| +.||||.++ +|+|+||
T Consensus 190 EPv~~~gg~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~gr~G~~-~~~~~~~v~pD----i~t~sK~l~-gG~~ig~ 262 (406)
T PRK12381 190 EPIQGEGGVIPADKAFLQGLRELCDRH-NALLIFDEVQTGVGRTGEL-YAYMHYGVTPD----VLTTAKALG-GGFPIGA 262 (406)
T ss_pred eCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEcchhhCCCCCcch-hhhHhhCCCCC----EEEehhhhh-CCCceEE
Confidence 6999998654 789999999999999 9999999999887555532 11111111112 468999998 9999999
Q ss_pred eEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC-CCe--eeCCCcce
Q 012095 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GVK--MSEPQGAF 390 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-g~~--~~~p~~g~ 390 (471)
+++++++++.+.......+++.+++.+.++.++|+.- ...+++++++++.+++.+.|+++. ... ......|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l-----~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl 337 (406)
T PRK12381 263 MLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELI-----NTPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGL 337 (406)
T ss_pred EEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHH-----hhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeE
Confidence 9999999998876555566788999999999988741 123567888888888888887751 121 11224467
Q ss_pred EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 391 YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
++++.++.... .....+.+.|+++ ||.+.++. ++++|++++. ++++|++++++|.++++++..
T Consensus 338 ~~~~~l~~~~~---------~~~~~~~~~l~~~-Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 338 LIGCVLNAEYA---------GKAKQISQEAAKA-GVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred EEEEEecCchh---------hHHHHHHHHHHHC-CcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 77887764210 1346777777665 99997642 4689998874 899999999999999987643
No 174
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=1.4e-25 Score=225.61 Aligned_cols=332 Identities=13% Similarity=0.130 Sum_probs=238.6
Q ss_pred cCCCeEEcCCCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++..+.+.+++.+++... ..+ +..-..++++.+++.+.. .++ .+++++++++++.
T Consensus 27 dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~-~~~-~~~~~~~~~~~la~~l~~------~~~~~~~~~~SGseA~~ 98 (375)
T PRK04260 27 DGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLI-WHS-PNLYLNSLQEEVAQKLIG------DKDYLAFFCNSGAEANE 98 (375)
T ss_pred CCCEEEECCCCcccccCCCCHHHHHHHHHHHHhc-Ccc-cCccCCHHHHHHHHHHhc------CcCCEEEEcCccHHHHH
Confidence 577899998874 45566778999999988652 223 333456788889887642 123 4688999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChH-HHHHHcCCEEEE------ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYP-EMARIADATPVI------LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~~------v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
.+++... ..++.|++.+.+|++.. ..+...|.+... ++......+ .|++.+++.+.+++.+|++..++|+
T Consensus 99 ~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dl~~l~~~l~~~~a~vi~e~v~~~ 177 (375)
T PRK04260 99 AAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIF-NDLNSVKALVNKNTAAVMLELVQGE 177 (375)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCC-CCHHHHHHhcCCCeEEEEECCeECC
Confidence 8887652 34578888888887643 333333322110 000000011 3899999988777888888999999
Q ss_pred cccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc-cccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 241 TGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 241 tG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
+|... +.+.+++|.++|+++ ++++|+||+|.++...+..... ...+. .+ +.||||.++ +|+|+||+++++
T Consensus 178 ~G~~~~~~~~l~~~~~l~~~~-~~~~i~De~~~g~g~~g~~~~~~~~~~~--pd----i~t~sK~l~-~G~~ig~~~~~~ 249 (375)
T PRK04260 178 SGVLPADKDFVKALADYCQET-GILLIVDEVQTGMGRTGKLYAFEHYGIE--PD----IFTLAKGLA-NGVPVGAMLAKS 249 (375)
T ss_pred CCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccchhhhHhhCCC--CC----EEEeccccc-CCcceEEEEEcH
Confidence 99864 567899999999999 9999999999876443321110 12222 12 448999998 899999999999
Q ss_pred HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCC
Q 012095 319 HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (471)
Q Consensus 319 ~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~ 398 (471)
++++.+.......+++.+++.+.++.++|+.... +++++++++..+..++.+.+.+.+.+.+... +..|+++|++++.
T Consensus 250 ~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~ 327 (375)
T PRK04260 250 SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLT-AGFLEQALENGNYLQEQLQKALQDKETVTTV-RGLGYMIGIETTA 327 (375)
T ss_pred HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-eccceEEEEEecC
Confidence 9988876544555677899999999999976322 4667888888888888888888776433333 2378889998842
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
+..++.+.|.++ ||.+.|+. .+.+|+++.. +++++++++++|+++
T Consensus 328 -------------~~~~~~~~l~~~-Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 328 -------------DLSQLVEAARDK-GLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred -------------cHHHHHHHHHhC-CCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 567889888875 99998753 3789999954 899999999999875
No 175
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=4.3e-25 Score=225.28 Aligned_cols=336 Identities=16% Similarity=0.123 Sum_probs=225.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP---NAG---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
++.|+|..|++. +|+.+++++...+.... .+++. ..| ...+.+...+.+++.+|. +..+|++++| +++
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~--~~~~i~~~sg-t~a 99 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--EYANVQPHSG-SQA 99 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceeeecCCc-hHH
Confidence 568999999977 57888888876643211 11110 012 222323234466777774 4456766665 668
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHH-----HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE-----MARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~-----~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPt 241 (471)
+..++.++++|||+|+++.|+|.++.. .+...|++++.++++. +++.+|++++++++++ ++++|++++++|
T Consensus 100 l~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~~~~-- 176 (416)
T PRK00011 100 NAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGASAY-- 176 (416)
T ss_pred HHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECCCcC--
Confidence 888999999999999999999986532 1234467888888764 3467999999999975 799998876655
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH 319 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~ 319 (471)
|...+ +++|.++|++| ++++|+|++|.. +.+.+. .+.. +. ...+++.||||.+ +|+|.||++++ ++
T Consensus 177 ~~~~~---~~~I~~la~~~-~~~livD~a~~~g~~~~g~-~~~~--~~---~~di~~~S~~K~l--~g~~gg~i~~~~~~ 244 (416)
T PRK00011 177 SRPID---FKRFREIADEV-GAYLMVDMAHIAGLVAAGV-HPSP--VP---HADVVTTTTHKTL--RGPRGGLILTNDEE 244 (416)
T ss_pred CCccC---HHHHHHHHHHc-CCEEEEECcchhcccccCc-cCCC--CC---CCcEEEecCCcCC--CCCCceEEEeCCHH
Confidence 45566 89999999999 999999999863 222221 1111 11 2347899999976 68899999996 68
Q ss_pred HHHHHHHHHhcccCCCChH-HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecC
Q 012095 320 FVAACNKIQSQFTSGASSI-SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~~~~~-~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~ 397 (471)
+++.+.+.......+.+.. .+.++..++... ..+++++.+++++++++++.+.|+++ |+++.. ...++++|+.++
T Consensus 245 ~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~ 321 (416)
T PRK00011 245 LAKKINSAVFPGIQGGPLMHVIAAKAVAFKEA--LEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLR 321 (416)
T ss_pred HHHHHHHHhCccccCCccHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCc
Confidence 9998887665444333322 333322233210 13457888899999999999999987 887653 123477898885
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC-CC-----CCCCcEEEEe------ecCHHHHHHHHHHHHHHHHh
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD-AF-----GDDTCIRISY------AASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~-~f-----~~~~~iRis~------~~~~e~i~~~~~~l~~~l~~ 464 (471)
+. + .+..++.+.|. +.||.+..+. .+ ..+..+|++. +.++++++++++.|++++..
T Consensus 322 ~~-~---------~~~~~~~~~L~-~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 322 SK-G---------LTGKEAEAALE-EANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred cc-C---------CCHHHHHHHHH-HcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 32 0 14567777665 4599997432 11 1245799964 22689999999999988764
No 176
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=4.4e-26 Score=216.00 Aligned_cols=316 Identities=19% Similarity=0.268 Sum_probs=206.9
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH-HH-HHHh----cC---C-----CCeEEEcCCCC
Q 012095 125 FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL-QA-VLAV----CS---P-----GDEVIIPAPFW 189 (471)
Q Consensus 125 ~~~Y-~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~-~~-~~~l----~~---~-----gd~Vlv~~p~y 189 (471)
..+| +...|++++|+-+++.+. +.++||++..+++-.|. -+ .+++ .+ | .-..|+|.|.|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~llg------v~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELLG------VPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHHT------S-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHhC------CCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 4689 889999999999999984 68899998776664443 22 2222 11 1 12589999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 190 ~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
.-+..+++..|.+.+.||+.+++ +|.|.+++.+. +..|.|| ++.-+||||.++|.+..++++.+--..+|+.|+
T Consensus 135 DRHFai~E~~Giemi~VpM~~dG---PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTEDG---PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETTE---E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred hHHHHHHHhhCcEEEecCCCCCC---CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 99999999999999999998654 89999999985 4567787 566699999999999999999984433599999
Q ss_pred EccCCCcccc-CCCCcc---cccc---CCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHH
Q 012095 267 SDEIYEHIIY-APATHT---SFAS---LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSIS 339 (471)
Q Consensus 267 ~De~y~~~~~-~~~~~~---~~~~---~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~ 339 (471)
-|++|..-.+ +..... .+.. -.+..++++.+.|.||.- .+|..++++.++++-++.+.+.....+.++.-+.
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT-f~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvN 290 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT-FPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVN 290 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHH
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc-cCCcceeeeecCHHHHHHHHHHhcCceeCccHHH
Confidence 9999985444 222111 2222 135578999999999997 6999999999999999999988888888999999
Q ss_pred HHHHHHHHhccC-CChHHHHHHHHHHHHHHHHHHHHhcC-CC---C-CeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 340 QKAGVAALGLGY-AGGEVVSKMVKAFRERRDFLVKSFGE-LE---G-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 340 q~aa~~~L~~~~-~~~~~~~~~~~~~~~~r~~l~~~L~~-~~---g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
|..-...+.+.. ....|+++..+.++-+.+.+.+.|++ +. | .+|..|.||+|++++..+. .+
T Consensus 291 QLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------------~A 358 (425)
T PF12897_consen 291 QLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------------TA 358 (425)
T ss_dssp HHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-------------H
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC------------hH
Confidence 999888888632 12355666666666666666666654 32 3 5899999999999999874 57
Q ss_pred HHHHHHHHHcCCEEEEC-CCCCC--C---CCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVP-GDAFG--D---DTCIRISYAA-SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~p-g~~f~--~---~~~iRis~~~-~~e~i~~~~~~l~~~l~ 463 (471)
..+++ |.++.||.++| |..|- . +..|||+.+. +.|+++.+++.+.-+++
T Consensus 359 krvV~-lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 359 KRVVE-LAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp HHHHH-HHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 77777 45667999999 66552 1 3689999998 88999999999987765
No 177
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=1.1e-24 Score=219.25 Aligned_cols=314 Identities=16% Similarity=0.183 Sum_probs=221.2
Q ss_pred HHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc------CCCCeE
Q 012095 111 VLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC------SPGDEV 182 (471)
Q Consensus 111 ~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~------~~gd~V 182 (471)
+.+.+++...+... ...+ ..|..++.+.+.+.+++.+|. +++++++++|+++++..++.++. .+||+|
T Consensus 34 ~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~g~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~v 109 (373)
T TIGR03812 34 PIAVKAYDMFIETNLGDPGL--FPGTKKIEEEVVGSLGNLLHL--PDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNI 109 (373)
T ss_pred HHHHHHHHHHhhcCCCCccc--CccHHHHHHHHHHHHHHHhCC--CCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEE
Confidence 44456665554332 1121 135566667777777777784 56788999999999988776654 467999
Q ss_pred EEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 183 IIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 183 lv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
++++++|.++...++..|++++.++.+ .++.+|++++++++++++..+++.+|+||||...+ +++|.++|+++ +
T Consensus 110 l~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~~-~ 183 (373)
T TIGR03812 110 IVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALEN-G 183 (373)
T ss_pred EECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHHc-C
Confidence 999999999999999999999999986 35678999999999877765555558999999998 88999999999 9
Q ss_pred eEEEEccCCCccccC--C--CCccccccCCCCCCceEEEecCCcccCccchhheeeE-cCHHHHHHHHHHHhccc-----
Q 012095 263 LLVLSDEIYEHIIYA--P--ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFT----- 332 (471)
Q Consensus 263 ~~ii~De~y~~~~~~--~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~~i~~l~~~~~~~~----- 332 (471)
+++++|++|..+... . ..... ..+.. .+-..+..|.+| +++++.|.|+++ .++++++.+.. ..++.
T Consensus 184 ~~livD~a~~~~~~~~~~~~~~~~~-~d~~~-~~~d~~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~~-~~~~~~~~~~ 259 (373)
T TIGR03812 184 IYLHVDAAFGGFVIPFLKKGYNPPP-FDFSL-PGVQSITIDPHK-MGLSPIPAGGILFRSKSYLKYLSV-DAPYLTVKKQ 259 (373)
T ss_pred CeEEEEcCchhHHHHHHhcCCCCCC-ccccC-CCCCEEEECccc-cCCCcCCceEEEEeCHHHHhhhcc-cCcccCCCCC
Confidence 999999999865321 0 00000 01100 111234456779 556778888665 67888877642 11221
Q ss_pred ----CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCC
Q 012095 333 ----SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGF 407 (471)
Q Consensus 333 ----~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~ 407 (471)
.+.+.....++.++|+.- .+..+++..++..++++++.+.|+++ |+. +..|..++ +.+.++
T Consensus 260 ~~~~gt~~~~~~~~~~~~l~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~-v~~~~~---------- 325 (373)
T TIGR03812 260 ATITGTRSGASAAATYAVIKYL--GREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNI-VAFEVD---------- 325 (373)
T ss_pred cceEeechhHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceE-EEEEeC----------
Confidence 123344555566666531 25667888899999999999999998 554 44555554 556664
Q ss_pred CCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 408 GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 408 ~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
+..++.++|.++ ||.+.++. .++++|+++.. ++++++++++.|++
T Consensus 326 ----~~~~v~~~L~~~-gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 ----DPEEVRKKLRDR-GWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred ----CHHHHHHHHHHC-CceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 345788888776 99987753 35789999985 88999999999875
No 178
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.95 E-value=1.3e-25 Score=205.20 Aligned_cols=352 Identities=15% Similarity=0.177 Sum_probs=261.3
Q ss_pred hcCCCeEEcCCCCC--CCCCh---HHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcE--EEeC
Q 012095 92 QAGVSVIRLAAGEP--DFDTP---VLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSN 162 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~p---~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~it~ 162 (471)
+..+..++|+.|.- +-..| |.+.++-.+.-.+ -.+.|.|..|.+.++++.++.+-......+..+++ +-+-
T Consensus 27 d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQsl 106 (410)
T KOG1412|consen 27 DLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDRVFGVQSL 106 (410)
T ss_pred cCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhccccceeec
Confidence 34556789999872 22222 3444433332222 13679999999999999999874332233455554 4566
Q ss_pred ChHHHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcC-CEEEEecCCCCCCCcCCHHHHHhhhccCC-cEEE-Ec-C
Q 012095 163 GAKQSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLTEKS-RLLI-LC-S 236 (471)
Q Consensus 163 G~~~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~~~-~~i~-i~-~ 236 (471)
+++.++......+. -+...|.+..|+|.++..+++.+| .++..+++-..++-.+|++.+...|...| +.|+ +. +
T Consensus 107 sGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaC 186 (410)
T KOG1412|consen 107 SGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHAC 186 (410)
T ss_pred cccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeecc
Confidence 77888876555442 235679999999999999999999 55677776555566799999999887543 3444 33 4
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc--cccccCCCCCCceEEEecCCcccCccchhheee
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH--TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI 314 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v 314 (471)
.|||||...++|+|.+|+++.++. +++.+.|-+|.+|..++... ..+..+......++++.||+|.||+.|-|+|-+
T Consensus 187 AhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnl 265 (410)
T KOG1412|consen 187 AHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNL 265 (410)
T ss_pred ccCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccce
Confidence 499999999999999999999998 99999999999987654322 222333333456899999999999999999975
Q ss_pred Ec---CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHH---HHHHHHHHHHHHHHHHHHhcCC--CC-C
Q 012095 315 AG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKMVKAFRERRDFLVKSFGEL--EG-V 381 (471)
Q Consensus 315 ~~---~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~---~~~~~~~~~~~r~~l~~~L~~~--~g-~ 381 (471)
.. ++. +..+|..+.+...++|+..+..++...|..+.+.++| +..+-.+.++.|..|++.|..+ || |
T Consensus 266 tvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtW 345 (410)
T KOG1412|consen 266 TVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTW 345 (410)
T ss_pred EEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcH
Confidence 42 333 4455666666677789999999999999986665667 4556678899999999999886 66 7
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKK 460 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~ 460 (471)
..+..+.|||-+..+ ....+++|.+++.|++.+-. ||+++. +..+++...++|.+
T Consensus 346 DHI~~QiGMFSyTGL----------------tp~qV~~li~~h~vyLl~~G--------RInisGLN~~NveyVAkAIde 401 (410)
T KOG1412|consen 346 DHITQQIGMFSYTGL----------------TPAQVDHLIENHKVYLLSDG--------RINISGLNMKNVEYVAKAIDE 401 (410)
T ss_pred HHHHhhccceeecCC----------------CHHHHHHHHHhceEEEecCC--------cEeeeccccccHHHHHHHHHH
Confidence 777789999887654 23567889999999998855 999998 77899999999999
Q ss_pred HHHhhCCC
Q 012095 461 GLLTLRPG 468 (471)
Q Consensus 461 ~l~~~~~~ 468 (471)
+++.+.+.
T Consensus 402 ~Vr~~~~~ 409 (410)
T KOG1412|consen 402 TVRAIKSN 409 (410)
T ss_pred HHHhhccC
Confidence 99887654
No 179
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=1.3e-24 Score=220.54 Aligned_cols=332 Identities=15% Similarity=0.163 Sum_probs=215.8
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHc-CCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~-~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+.++|++.+. ..+..++++.+++.+++.+ +...++.. ....+..+.+++.+.+..|. +.++.++| +++.
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~----~~~~~~sG-~~a~ 118 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA----SVLTFTSC-SAAH 118 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC----CEEEECCh-HHHH
Confidence 578899997754 3334588999999998875 21122111 12345566666666655552 45555555 4566
Q ss_pred HHHHHHhc----CCCC-eEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 169 LQAVLAVC----SPGD-EVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 169 ~~~~~~l~----~~gd-~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
..++..+. .+|+ .|++.+..|++.. ......+.+++.+|. .|++.++++++++++++++++|+||
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~vl~~p~~~ 191 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAYVADGVYS 191 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEEEEecccc
Confidence 65565432 2233 3656665554322 112224567777775 3889999998877899999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc-ccccCCC-CCCceEEEecCCcccCccchhheeeE-cC
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIA-GP 317 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~-~~ 317 (471)
||.+++ +++|.++|++| ++++|+||+|....++..... ....+.. ..+++++++||||.+|++| ||++ .+
T Consensus 192 ~G~~~~---~~~i~~l~~~~-~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~ 264 (402)
T PRK07505 192 MGGIAP---VKELLRLQEKY-GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGD 264 (402)
T ss_pred cCCcCC---HHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCC
Confidence 999999 88889999999 999999999976545432211 1112222 3578999999999999777 8987 47
Q ss_pred HHHHHHHHHHHhcccC--CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--Ee
Q 012095 318 KHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LF 393 (471)
Q Consensus 318 ~~~i~~l~~~~~~~~~--~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~ 393 (471)
+++++.+......+++ ++++++..++.++++.. .++++.+..+.++++.+.+...+.. ...+.++ .+
T Consensus 265 ~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~--~~~~~~~~~~~l~~~~~~~~~~~~~-------~~~g~~~~i~~ 335 (402)
T PRK07505 265 AEQIELILRYAGPLAFSQSLNVAALGAILASAEIH--LSEELDQLQQKLQNNIALFDSLIPT-------EQSGSFLPIRL 335 (402)
T ss_pred HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHh-------cCCCCCCCEEE
Confidence 8899988876555544 34557777777777621 1334445555555555544332211 1123222 23
Q ss_pred EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
+.++.. .+..++.+.|+++ ||.+.++..+.. +++|||++.. +++++++++++|++++++
T Consensus 336 ~~~~~~-----------~~~~~~~~~l~~~-Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 336 IYIGDE-----------DTAIKAAKQLLDR-GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EEeCCH-----------HHHHHHHHHHHHC-CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 333211 1356789988876 999998754432 2589999995 999999999999998864
No 180
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=1.7e-24 Score=217.40 Aligned_cols=330 Identities=17% Similarity=0.146 Sum_probs=231.2
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREGFTRYT---PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~~~~Y~---~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
++++++|++++ ..+...+.++++..+++.+.-.+.+ ...|...+.+.+.+.+++.+| .++.+++++|....+
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g---~e~all~sSGy~AN~- 176 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK---KEDCLVCPTGFAANM- 176 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC---CCcEEEECChHHHHH-
Confidence 45789999998 7788889999999998876211111 235665566666666665555 445555666655544
Q ss_pred HHHHHh--------------cCCCCeEEEcCCCCCChHHHHHHc----CCEEEEecCCCCCCCcCCHHHHHhhhcc---C
Q 012095 170 QAVLAV--------------CSPGDEVIIPAPFWVSYPEMARIA----DATPVILPTRISENFLLDPKVLESKLTE---K 228 (471)
Q Consensus 170 ~~~~~l--------------~~~gd~Vlv~~p~y~~~~~~~~~~----G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~ 228 (471)
.++.+| ..++|.|+.+.-.|.+....+++. +++++.++.+ |++.|+++++. +
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-------D~~~Le~~L~~~~~~ 249 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-------DMYHLNSLLSSCKMK 249 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-------CHHHHHHHHHhCCCC
Confidence 456555 245678888888999999999887 5777777742 89999988843 3
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
.++|++....++.|.+.+ +++|.++|++| ++++|+||+|+.++++..+......+....+..|+++||||++|..|
T Consensus 250 ~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~-ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G 325 (476)
T PLN02955 250 RKVVVTDSLFSMDGDFAP---MEELSQLRKKY-GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG 325 (476)
T ss_pred ceEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC
Confidence 445555666899999999 99999999999 99999999999888865433333333223577899999999998777
Q ss_pred hhheeeEcCHHHHHHHHHHHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 309 WRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
||+++++++++.+......+.++. ++....++.+++... ..-...++.++++.+++.+.+ |+.+
T Consensus 326 ---Gfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~----~~~~~~r~~L~~n~~~fr~~~----G~~~--- 391 (476)
T PLN02955 326 ---GFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVA----RKEKWRRKAIWERVKEFKALS----GVDI--- 391 (476)
T ss_pred ---ceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHHhc----CCCC---
Confidence 999999999999887655543333 333444445555431 111235667777777777642 5543
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
. ...+.+.+... ....++.++|+++ ||++.+..+...+ ..+||++.. ++++|+++++.|.++
T Consensus 392 ~-sPI~pI~ig~~-----------~~a~~~~~~L~~~-Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~ 458 (476)
T PLN02955 392 S-SPIISLVVGNQ-----------EKALKASRYLLKS-GFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSC 458 (476)
T ss_pred C-CCEEEEEeCCH-----------HHHHHHHHHHHHC-CCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHH
Confidence 1 33344555432 1466788998876 9999987766544 469999987 999999999999988
Q ss_pred HHhh
Q 012095 462 LLTL 465 (471)
Q Consensus 462 l~~~ 465 (471)
....
T Consensus 459 ~~~~ 462 (476)
T PLN02955 459 LDFD 462 (476)
T ss_pred Hhhh
Confidence 6543
No 181
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=5.2e-25 Score=223.51 Aligned_cols=327 Identities=17% Similarity=0.178 Sum_probs=226.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCC---CC------CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRY---TP------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y---~~------~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.+.|..+... +.|+.+.+++.+.+.....+- .. .....++|+.++++ +| .++++|++|+|++++
T Consensus 4 ~~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~g--~~~~~v~~~~g~t~a 76 (402)
T TIGR02006 4 PIYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAEL----IG--ADSREIVFTSGATES 76 (402)
T ss_pred cEEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHH----hC--CCCCeEEEeCCHHHH
Confidence 3666666654 457788888887764321110 00 01223344555554 55 467899999999999
Q ss_pred HHHHHHHhc----CCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 168 ILQAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 168 l~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
+..++.++. .+||.|+++.+.|+++...+ +..|++++.++++. ++.+|++.++++++++++++++++++||
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~~~n~ 154 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMHVNNE 154 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECCCcC
Confidence 998877653 68999999999998866543 44699999999863 4568999999999888999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
||.+.+ +++|.++|+++ ++++++|+++... .....+.. .+-.+++.|+.|.+|.+| +|+++.+++.
T Consensus 155 tG~~~~---~~~I~~l~~~~-g~~livD~a~a~g----~~~~~~~~----~~~D~~~~s~~K~~gp~G--~G~l~~~~~~ 220 (402)
T TIGR02006 155 IGVIQD---IAAIGEICRER-KVFFHVDAAQSVG----KIPINVNE----LKVDLMSISGHKIYGPKG--IGALYVRRKP 220 (402)
T ss_pred ceeccc---HHHHHHHHHHc-CCEEEEEcchhcC----CcccCccc----cCCCEEEEehhhhcCCCc--eEEEEEccCC
Confidence 999999 88999999999 9999999998752 21111111 234578888889887446 8998877654
Q ss_pred HHHHHHHH-------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc----c
Q 012095 321 VAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----A 389 (471)
Q Consensus 321 i~~l~~~~-------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~----g 389 (471)
...+.... .....+++.....++.++|+. ..++++...+++++.++++.+.|++++++.+..+.. +
T Consensus 221 ~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~ 297 (402)
T TIGR02006 221 RVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRI---AKEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG 297 (402)
T ss_pred CCCCCceecCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 33222110 111223555555555567764 245677888899999999999999888876653211 1
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CH
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SL 448 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~ 448 (471)
. +.+.++.. +..++...| .++.+..|..+.. .+++|+|++. ++
T Consensus 298 ~-~~v~f~~~------------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~ 361 (402)
T TIGR02006 298 N-LNVSFNYV------------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTE 361 (402)
T ss_pred e-EEEEEeCc------------CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCH
Confidence 1 12233321 345565544 3788877765432 2689999997 89
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012095 449 TTLQAAVERIKKGLLTL 465 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~~ 465 (471)
+|++++++.|+++++.+
T Consensus 362 edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 362 EEIDYAVKLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999988765
No 182
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.95 E-value=7.6e-25 Score=222.37 Aligned_cols=342 Identities=16% Similarity=0.110 Sum_probs=225.6
Q ss_pred cCCCeEEcCCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~---~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|..... .+|.+.+++.+++....... +. -..+..+.+++.+.+..+ .+.++++++++++..
T Consensus 29 dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A~e 102 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS-RA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAEAGE 102 (400)
T ss_pred CCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc-cc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHHHHH
Confidence 5778999988875443 37889999999876532221 11 113455566666655444 258899999999999
Q ss_pred HHHHHhcC----------CCCeEEEcCCCCCChHHH-HHHcCCEEEE---ecCCCC--CCCcCCHHHHHhhhc-cCCcEE
Q 012095 170 QAVLAVCS----------PGDEVIIPAPFWVSYPEM-ARIADATPVI---LPTRIS--ENFLLDPKVLESKLT-EKSRLL 232 (471)
Q Consensus 170 ~~~~~l~~----------~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~---v~~~~~--~~~~ld~e~l~~~l~-~~~~~i 232 (471)
.+++.+.. .++.|++.+-+|.+.... ....+..... .+.... .-...|++++++.++ +++++|
T Consensus 103 ~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v 182 (400)
T PTZ00125 103 TALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAF 182 (400)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEE
Confidence 99887631 346788888877765533 3332221110 011000 000138999999986 678899
Q ss_pred EEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 233 ILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 233 ~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
++..++||||.+++ .+.+++|.++|++| |+++|+||+|..+.+.|... . ....+.... +.+|||.++.+++|+
T Consensus 183 ~~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~Dev~~g~g~~G~~~-~-~~~~~~~pd---~~~~sK~l~~g~~~i 256 (400)
T PTZ00125 183 IVEPIQGEAGVIVPDDGYLKQVYELCKKY-NVLLIVDEIQTGLGRTGKLL-A-HDHEGVKPD---IVLLGKALSGGLYPI 256 (400)
T ss_pred EEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhh-H-HHhcCCCCC---EEEEcccccCCCcCc
Confidence 89888999999886 56699999999999 99999999998765444211 1 111111111 335789998444699
Q ss_pred eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CCCCeeeCCC
Q 012095 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGVKMSEPQ 387 (471)
Q Consensus 312 G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g~~~~~p~ 387 (471)
||+++++++++.+.......+++.+++.+.++.++|+.- .+ ....+..+++.+++.+.|.+ .+.+....+
T Consensus 257 g~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i---~~--~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~- 330 (400)
T PTZ00125 257 SAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVL---KE--EKLAENAQRLGEVFRDGLKELLKKSPWVKEIRG- 330 (400)
T ss_pred EEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEec-
Confidence 999999999998865444556678899999988877641 11 11233334444555555544 222333445
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
.|.++|+.++.... .+..++++.|+++ ||.+.|+. .++|||++. .+++++++++++|.++++++
T Consensus 331 ~g~~~~v~~~~~~~---------~~~~~~~~~l~~~-Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 331 KGLLNAIVFDHSDG---------VNAWDLCLKLKEN-GLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred ccEEEEEEEccCcc---------hHHHHHHHHHHHC-CeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 45556777753100 1467888988865 99999863 578999965 59999999999999999876
Q ss_pred C
Q 012095 466 R 466 (471)
Q Consensus 466 ~ 466 (471)
.
T Consensus 397 ~ 397 (400)
T PTZ00125 397 D 397 (400)
T ss_pred h
Confidence 4
No 183
>PRK14012 cysteine desulfurase; Provisional
Probab=99.94 E-value=5.1e-25 Score=223.78 Aligned_cols=326 Identities=17% Similarity=0.187 Sum_probs=221.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH--cCCCCCC---CC------CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIR--EGFTRYT---PN------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~--~~~~~Y~---~~------~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
.|.|..+... ++|+.+.+++.+.+. ....+.. .. ....++|+.++++ .| .++++|++++|++
T Consensus 4 ~iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~----~g--~~~~~v~~~~g~t 76 (404)
T PRK14012 4 PIYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADL----IG--ADPREIVFTSGAT 76 (404)
T ss_pred eEEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHH----cC--cCcCeEEEeCCHH
Confidence 3666666654 457778888888765 2111110 00 1123444555544 45 3568899999999
Q ss_pred HHHHHHHHHhc----CCCCeEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 166 QSILQAVLAVC----SPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 166 ~al~~~~~~l~----~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
+++..++.++. .+||+|+++++.|+++...++ ..|++++.++.+. ++.+|+++++++++++++++++++++
T Consensus 77 ~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~ 154 (404)
T PRK14012 77 ESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIMHVN 154 (404)
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEECcC
Confidence 99998887764 789999999999988765443 4599999998863 45689999999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
||||.+++ +++|.++|+++ +++||+|+++.. +.....+.. .+..+++.|++|.+| |+ ++|++++++
T Consensus 155 n~tG~~~~---~~~I~~la~~~-g~~vivD~a~~~----g~~~~~~~~----~~~D~~~~s~~K~~g-p~-g~G~l~~~~ 220 (404)
T PRK14012 155 NEIGVIQD---IAAIGEICRER-GIIFHVDAAQSV----GKVPIDLSK----LKVDLMSFSAHKIYG-PK-GIGALYVRR 220 (404)
T ss_pred CCccchhh---HHHHHHHHHHc-CCEEEEEcchhc----CCcccCccc----CCCCEEEEehhhccC-CC-ceEEEEEec
Confidence 99999999 88999999999 999999999874 221112221 233477789999887 54 689988876
Q ss_pred HHHHHHHHH-H-----hcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-----
Q 012095 319 HFVAACNKI-Q-----SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----- 386 (471)
Q Consensus 319 ~~i~~l~~~-~-----~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----- 386 (471)
+....+... . ..+.. +++.....+..+++.. .+.+.....++.++.++++.+.|++++++.+..+
T Consensus 221 ~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~---~~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~ 297 (404)
T PRK14012 221 KPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARI---AKEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRV 297 (404)
T ss_pred CCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 543222211 0 00111 2333333334455543 2344566778888899999999988877765422
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec-
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA- 446 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~- 446 (471)
...+++++.+. +..++...| + ++.+..|..|.. .+.||++++.
T Consensus 298 ~~~~~~~~~~~--------------~~~~~~~~l--~-~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~ 360 (404)
T PRK14012 298 PGNLNVSFNYV--------------EGESLIMAL--K-DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF 360 (404)
T ss_pred CCEEEEEEeCc--------------CHHHHHHhC--C-CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCC
Confidence 12234454442 234566654 2 667766654421 2679999997
Q ss_pred -CHHHHHHHHHHHHHHHHhh
Q 012095 447 -SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l~~~ 465 (471)
++++++++++.|+++++.+
T Consensus 361 ~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 361 TTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988765
No 184
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.94 E-value=7.5e-25 Score=220.40 Aligned_cols=285 Identities=15% Similarity=0.167 Sum_probs=198.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~ 205 (471)
+++...+|++.+++++ | ..+. +++++++.++..++.+++++||+|+++.|.|......+. ..|.++..
T Consensus 59 ~~pt~~~Le~~lA~l~----G---~~~a-l~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~ 130 (386)
T PRK06767 59 GNPTVKLFEERMAVLE----G---GEEA-LAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSF 130 (386)
T ss_pred CCcchHHHHHHHHHHh----C---CCcE-EEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEE
Confidence 5556788888888886 3 2344 445555678988998999999999999999887665443 34665555
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++ ++++|+|++|....+. .++
T Consensus 131 ~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~----~pl- 194 (386)
T PRK06767 131 CDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRN-GLLVIVDNTFCSPYLQ----RPL- 194 (386)
T ss_pred eCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-
Confidence 543 3889999999889999999999999999999 88999999999 9999999999643221 111
Q ss_pred cCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHHHHHH-HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNK-IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~~l~~-~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
. .+..+++.|+||.++.+|+|+ ||+++++++++++.+ .......+.+++.+.++...|+ .+....++
T Consensus 195 ~----~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-------tl~~r~~~ 263 (386)
T PRK06767 195 E----LGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-------TLAVRMDR 263 (386)
T ss_pred h----cCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHHH
Confidence 1 233488999999998789886 999999998877643 3333444456665554433332 24456677
Q ss_pred HHHHHHHHHHHhcCCCCCee-eCC-----------CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012095 364 FRERRDFLVKSFGELEGVKM-SEP-----------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 431 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~~-~~p-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg 431 (471)
.++++..+.+.|+++|+++. ..| .||+ +.+.+... ..+..+|.+.|. ..++.+.-|
T Consensus 264 ~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~-vsf~l~~~----------~~~~~~f~~~l~-~~~~~~s~G 331 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGV-ISFSIKGG----------KEETQAFINDLH-FITIAVSLG 331 (386)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCce-EEEEEcCC----------HHHHHHHHHhCC-ccEEecCCC
Confidence 88999999999999998763 322 3455 44456421 014567777763 345655555
Q ss_pred CCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 432 DAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 432 ~~f~-----------------------~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.... .++.||+|++.. +.+..++.|.+++.
T Consensus 332 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~ 384 (386)
T PRK06767 332 DTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK 384 (386)
T ss_pred CcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 3221 125799999983 34455555555554
No 185
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=1.7e-24 Score=216.75 Aligned_cols=217 Identities=13% Similarity=0.198 Sum_probs=165.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC----ChHHHHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV----SYPEMARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~----~~~~~~~~~G~~~~~ 205 (471)
.++...+|++.++++++ ....+++ +++++++..++.++++|||+|+++.|.|. .|...++..|++++.
T Consensus 43 ~~p~~~~L~~~lA~l~g-------~~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~ 114 (376)
T PRK06460 43 ANPTVLELTKKIVELEN-------AEMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDA 114 (376)
T ss_pred CCccHHHHHHHHHHHhC-------CCcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEE
Confidence 44667889999998863 2235555 44568999999999999999999987654 445677889999988
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ +.+.+++.+++++|+|++++|+||||.+++ +++|+++|+++ +++||+||+|.... ...
T Consensus 115 ~~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~-g~~vivDea~~~~~-------~~~ 176 (376)
T PRK06460 115 SNPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKEN-GSILIVDATFSTPI-------NQK 176 (376)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCcCccc-------cCC
Confidence 8753 234455656778999999999999999999 67789999999 99999999997521 111
Q ss_pred cCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
.+ ..+..+++.|+||.++ ..|.|+||+++++++++.+.+.+..++.+.++.. +..++. ..++++..+++.
T Consensus 177 ~l--~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~---a~~~l~----~~~~l~~r~~~~ 247 (376)
T PRK06460 177 PL--ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHA---AYLTLR----GIKTLKIRMDVI 247 (376)
T ss_pred hh--hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcCCCCCHHH---HHHHHh----chhhHHHHHHHH
Confidence 11 1245699999999985 2236799999999999999988777776655533 344444 257788889999
Q ss_pred HHHHHHHHHHhcCCCCC
Q 012095 365 RERRDFLVKSFGELEGV 381 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~ 381 (471)
.++++.+.+.|++.|.+
T Consensus 248 ~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 248 NRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 99999999999987665
No 186
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.94 E-value=2.1e-24 Score=217.26 Aligned_cols=215 Identities=16% Similarity=0.192 Sum_probs=167.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~ 208 (471)
-..+|++.+++++ | .+++++++|+++++..++.+++++||+|+++.+.|.+... .+...|++++.+++
T Consensus 62 ~~~~le~~la~l~----g----~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 62 TVTMFQERLAALE----G----AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 3456777777764 3 3578999999999999999999999999999999977553 45678999999976
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
+ |++++++++++++|+|++++|+||||.+.+ +++|+++|+++ +++||+|++|....+. .++ .
T Consensus 134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~-gi~livD~t~~~~~~~----~pl-~-- 195 (390)
T PRK08133 134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAA-GALLVVDNCFCTPALQ----QPL-K-- 195 (390)
T ss_pred C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-h--
Confidence 3 789999999999999999999999999998 89999999999 9999999998653221 111 1
Q ss_pred CCCCceEEEecCCcccCccchhh-eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
.+..+++.|+||.++.+|+++ ||+++++++++.+.........+++++.+.. ++.. .+.+....+++.++
T Consensus 196 --~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~---~l~g----l~tl~~R~~~~~~~ 266 (390)
T PRK08133 196 --LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWV---FLKG----LETLSLRMEAHSAN 266 (390)
T ss_pred --hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHH---HHcc----cchHHHHHHHHHHH
Confidence 233488999999998889998 6777888888887766655555555555333 3332 23566667777788
Q ss_pred HHHHHHHhcCCCCCe
Q 012095 368 RDFLVKSFGELEGVK 382 (471)
Q Consensus 368 r~~l~~~L~~~~g~~ 382 (471)
+..+.+.|++.|++.
T Consensus 267 a~~la~~L~~~p~v~ 281 (390)
T PRK08133 267 ALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHhCCCee
Confidence 889999999887764
No 187
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.94 E-value=3.6e-24 Score=216.62 Aligned_cols=333 Identities=13% Similarity=0.163 Sum_probs=227.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..|. ..++. +|.+.+++.+++.+.. ..+. ....+....+++.+.+..+ .+.++++++++++..
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~-~~~~-~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 106 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLW-HIGN-GYTNEPVLRLAKKLVDATF----ADKVFFCNSGAEANE 106 (397)
T ss_pred CCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcc-cccC-ccCCHHHHHHHHHHHhhCC----CCEEEEeCCcHHHHH
Confidence 678899998873 34444 7899999999887522 1111 1123455666666665443 369999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 170 QAVLAVC-------SPG-DEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 170 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.+++... .+| +.|+..+-+|++... .....+.. +..++. .|++.+++.+.++
T Consensus 107 ~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 107 AALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC
Confidence 9988752 123 567777777776543 33333321 122221 2899999999878
Q ss_pred CcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 229 SRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
+++|+++.+++++|... +.+.+++|.++|++| |+++|.||+|.++...|... ...... -..-+-+|||.+| +
T Consensus 180 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~Gr~G~~~-a~~~~g----v~pDi~t~~K~lg-g 252 (397)
T TIGR03246 180 TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH-NALLIFDEVQTGVGRTGELY-AYMHYG----VTPDILTSAKALG-G 252 (397)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCccccch-hhhhcC----CCCCEEEeehhhh-C
Confidence 88888876666677554 899999999999999 99999999998764433211 111111 1122447999998 8
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC---C-Cee
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---G-VKM 383 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---g-~~~ 383 (471)
|+|+||+++++++++.+.......+++.+++++.++.++|+.. + .+++.+.++++.+++.+.|+++. + +..
T Consensus 253 G~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~---~--~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~ 327 (397)
T TIGR03246 253 GFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLV---N--TPELLAGVKQRHDLFVDGLEKINARYNVFSE 327 (397)
T ss_pred CcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHH---h--hccHHHHHHHHHHHHHHHHHHHHhcCCCeEe
Confidence 9999999999999988865444456678899999999988741 1 24567788888888888887751 1 222
Q ss_pred eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~i~~~~~~l~~~ 461 (471)
..+.|.+ +.+.+..... .....+++.|+++ ||.+.+.. ++++|++. ..++++|++++++|.++
T Consensus 328 vrg~G~~-~~i~~~~~~~---------~~~~~~~~~l~~~-Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 328 IRGKGLL-IGAVLTEAYQ---------GKAKQFVNAAAEE-GVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERA 392 (397)
T ss_pred eecCceE-EEEEEcCchh---------hHHHHHHHHHHHC-CeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 3344444 4444432100 1467888888876 88887632 36899954 45999999999999999
Q ss_pred HHhh
Q 012095 462 LLTL 465 (471)
Q Consensus 462 l~~~ 465 (471)
++++
T Consensus 393 l~~~ 396 (397)
T TIGR03246 393 IEQV 396 (397)
T ss_pred HHHh
Confidence 8753
No 188
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.5e-24 Score=216.72 Aligned_cols=218 Identities=16% Similarity=0.188 Sum_probs=168.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~ 205 (471)
+.+-..+|++.+++++ | .++.++++++++++..++.+++++||+|+++.|+|.++.. .+...|++++.
T Consensus 62 ~~p~~~~le~~lA~l~----g----~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~ 133 (398)
T PRK08249 62 TNPTVQAFEEKVRILE----G----AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTL 133 (398)
T ss_pred CChHHHHHHHHHHHHh----C----CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEE
Confidence 4455677888888875 3 2456777777899999999999999999999999987643 35567888877
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++. .|++.+++++++++++|++++|+||||.+++ +++|+++|+++ +++||+|++|....... ++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~-gi~livD~t~a~~~~~~----~l- 197 (398)
T PRK08249 134 CET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKV-GALVVVDNTFATPINQN----PL- 197 (398)
T ss_pred cCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCcCccccCC----ch-
Confidence 753 4899999999999999999999999999999 88899999999 99999999998643221 11
Q ss_pred cCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
. .+..+++.|+||.++-.|.++ ||+++++++++++...+.....+.+++.+..+...|+ .+....++.
T Consensus 198 ~----~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-------tL~~R~~~~ 266 (398)
T PRK08249 198 A----LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMK-------TLKLRVRQQ 266 (398)
T ss_pred h----hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-------hHHHHHHHH
Confidence 1 123388899999997566665 7788899999999888776676777777665554443 245555666
Q ss_pred HHHHHHHHHHhcCCCCCe
Q 012095 365 RERRDFLVKSFGELEGVK 382 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~ 382 (471)
.+++..+.+.|++.|.++
T Consensus 267 ~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 267 QESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHcCCCee
Confidence 788888888888876543
No 189
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=3.6e-24 Score=214.62 Aligned_cols=222 Identities=15% Similarity=0.191 Sum_probs=169.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcC
Q 012095 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIAD 200 (471)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G 200 (471)
..+| +++-..+|++.++++. | .+++++++|+++++..++.+++++||+|+++.|+|..+...+ ...|
T Consensus 45 Y~R~-~~p~~~~le~~lA~l~----g----~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRS-GNPTRDLLQQALAELE----G----GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCC-CCchHHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 3455 5556678888888875 2 468999999999999999999999999999999998655433 2234
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~ 280 (471)
.++..++. .|++.+++++++++|+|++++|+||||.+++ +++|+++|+++ +++||+|++|......
T Consensus 116 ~~v~~~d~-------~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~--- 181 (382)
T TIGR02080 116 FRVLFVDQ-------GDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAV-GAVVVVDNTFLSPALQ--- 181 (382)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCcccccC---
Confidence 55555431 3899999999989999999999999999999 78899999999 9999999999764321
Q ss_pred ccccccCCCCCCceEEEecCCcccC-ccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHH
Q 012095 281 HTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
.++ .+ +..++++|+||.++ .+|++.||+++ ++++++++...+...+.+.+++....+...| +.+.
T Consensus 182 -~pl-~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-------~tl~ 248 (382)
T TIGR02080 182 -NPL-AL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGL-------RTLV 248 (382)
T ss_pred -Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHccc-------chHH
Confidence 111 11 22489999999985 57789999876 6788898888877777778888765553333 2344
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
...++..++...+.+.|++.|.++
T Consensus 249 ~R~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 249 ARMRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 446666778888888888766543
No 190
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=6.7e-24 Score=212.78 Aligned_cols=221 Identities=15% Similarity=0.175 Sum_probs=173.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~ 201 (471)
.+| +++...+|++.++++. | .+++++++|+++++..++.++++|||+|++++|+|.++...+. ..|.
T Consensus 47 ~R~-~~pt~~~L~~~lA~l~----g----~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi 117 (386)
T PRK08045 47 SRR-GNPTRDVVQRALAELE----G----GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY 117 (386)
T ss_pred eCC-CCccHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe
Confidence 455 5556678888888875 3 2469999999999999999999999999999999986443322 2344
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
++..++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++ +++||+|++|..... .
T Consensus 118 ~v~~vd~-------~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~-g~~vivDeay~~~~~----~ 182 (386)
T PRK08045 118 RVLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREA-GAVSVVDNTFLSPAL----Q 182 (386)
T ss_pred EEEEeCC-------CCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCcccc----C
Confidence 6655531 5899999999889999999999999999999 88899999999 999999999976422 1
Q ss_pred cccccCCCCCCceEEEecCCcccC-ccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.++ .. +..+++.|++|.++ .++.+.||+++ ++++++.+...+...+.+.+++.+..+...|+. +..
T Consensus 183 ~pl-~~----gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t-------l~~ 250 (386)
T PRK08045 183 NPL-AL----GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVP 250 (386)
T ss_pred Cch-hh----CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc-------HHH
Confidence 111 11 22389999999994 56677899876 678888888777778888999998887777764 666
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCe
Q 012095 360 MVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
.+++..+++..+.+.|++.|.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (386)
T PRK08045 251 RMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEe
Confidence 77778888888888998877653
No 191
>PLN00144 acetylornithine transaminase
Probab=99.94 E-value=3.7e-24 Score=214.98 Aligned_cols=337 Identities=14% Similarity=0.091 Sum_probs=226.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+..+ ++. ....+....+++.+.+..+ .+.++++++++++..
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~-~~~~~~~~~la~~l~~~~~----~~~v~f~~sGseA~e 86 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAH-VSN-VYHTIPQVELAKRLVASSF----ADRVFFCNSGTEANE 86 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCC-ccc-cccCHHHHHHHHHHHhcCC----CCeEEEeCCcHHHHH
Confidence 678899998886 33444 78999999999876321 211 1224455666776654322 368999999999999
Q ss_pred HHHHHhc---C------C------CCeEEEcCCCCCChHHHHHHcCCEEE----EecCCCCC---CCcCCHHHHHhhhcc
Q 012095 170 QAVLAVC---S------P------GDEVIIPAPFWVSYPEMARIADATPV----ILPTRISE---NFLLDPKVLESKLTE 227 (471)
Q Consensus 170 ~~~~~l~---~------~------gd~Vlv~~p~y~~~~~~~~~~G~~~~----~v~~~~~~---~~~ld~e~l~~~l~~ 227 (471)
.+++... . + ...|+....+|++....+........ +.|..+.. .| .|++.+++.+..
T Consensus 87 ~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~ 165 (382)
T PLN00144 87 AAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-GNLEAARKLIQK 165 (382)
T ss_pred HHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-CCHHHHHHhcCC
Confidence 8888642 1 0 24688888889887654443322110 01111000 01 278999988853
Q ss_pred -CCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc-cccCCCCCCceEEEecCCccc
Q 012095 228 -KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~ 304 (471)
++++|++...+||+|. ..+++.+++|.++|++| ++++|+||+|.++...+..... ...+.+ | +.||||.+
T Consensus 166 ~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~-g~llI~DEv~tg~gr~g~~~~~~~~~~~P--D----i~t~sK~l 238 (382)
T PLN00144 166 GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEA-GALLVFDEVQCGLGRTGYLWAHEAYGVEP--D----IMTLAKPL 238 (382)
T ss_pred CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchHhhhhhcCCCC--C----EEEecccc
Confidence 5666666444889553 33556699999999999 9999999999987655532111 233332 2 88899999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC--ChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA--GGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
+ +|+|+||+++++++++.+.......+++.+++++.++.+.|+.-.. ..+++.++.+.+ ++.+.+.+.+.|.+.
T Consensus 239 ~-~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l---~~~l~~~~~~~~~~~ 314 (382)
T PLN00144 239 A-GGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYL---RELLRRKLGGNPHVK 314 (382)
T ss_pred c-CCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHH---HHHHHHHHhhCCCce
Confidence 8 9999999999999998886544556778899999999966653110 123344444444 344445555554332
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
-+. ..|+++|+.+.. +...+++.++++ ||.+.|+. ..+.||++++. +++++++++++|.+
T Consensus 315 ~vr-g~G~~~~l~l~~-------------~~~~~~~~~~~~-Gv~i~~~~---~~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 315 EVR-GVGLLVGIQLDV-------------PAGPLVDACRDS-GLLVLTAG---KGDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred eee-cCceEEEEEecC-------------ccHHHHHHHHHC-CeEEeecC---CCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 222 378889999832 456788888765 99999873 24789999986 88999999999999
Q ss_pred HHHhh
Q 012095 461 GLLTL 465 (471)
Q Consensus 461 ~l~~~ 465 (471)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98764
No 192
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=6.2e-24 Score=214.19 Aligned_cols=249 Identities=16% Similarity=0.204 Sum_probs=175.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.|.++.+.... .+..+.+.... ...+ ..+| +.+-..+|++.+++++ |. +..+++++++.++..++.
T Consensus 30 ~pi~~~~~~~~~-~~~~~~~~~~~-~~~~~~y~r~-~~p~~~~Le~~lA~l~----G~----~~~~~~~sG~~Ai~~~l~ 98 (398)
T PRK07504 30 EALFLTQGFVYD-TAEAAEARFKG-EDPGFIYSRY-SNPTVDMFEKRMCALE----GA----EDARATASGMAAVTAAIL 98 (398)
T ss_pred CCeECCCCccCC-CHHHHHHHhcc-CcCCceeecC-CCchHHHHHHHHHHHh----CC----CeeeEecCHHHHHHHHHH
Confidence 347777776432 34333322111 0111 2334 4455678888888875 32 233456677888888888
Q ss_pred HhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
+++++||+|++++|.|..+...+ ...|++++.++. +|++++++++++++|+|++++|+||||.+++
T Consensus 99 ~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-------~d~e~l~~ai~~~tklV~lesp~NptG~v~d--- 168 (398)
T PRK07504 99 CQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-------LDLDNWEKAVRPNTKVFFLESPTNPTLEVID--- 168 (398)
T ss_pred HHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCcEecC---
Confidence 88999999999999999765443 457888888851 6999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhe-eeEcCHHHHH-HHHHH
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA-ACNKI 327 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~~i~-~l~~~ 327 (471)
+++|.++|+++ ++++|+|++|....+. .+ .. .+..+++.|+||.++.+|+|+| +++++++++. .+...
T Consensus 169 l~~I~~la~~~-gi~lvvD~a~a~~~~~----~~-~~----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~ 238 (398)
T PRK07504 169 IAAVAKIANQA-GAKLVVDNVFATPLFQ----KP-LE----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDY 238 (398)
T ss_pred HHHHHHHHHHc-CCEEEEECCccccccC----Cc-hh----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHH
Confidence 88999999999 9999999999864331 11 11 2445899999999988999996 6777777665 35444
Q ss_pred HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 328 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
......+++++.+.++...|+ .+....++..++...+.+.|++.|++.
T Consensus 239 ~~~~g~~~s~~~A~~~l~~L~-------tl~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 239 FRHTGPSLSPFNAWTLLKGLE-------TLPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHhCCCCCHHHHHHHHhccc-------hHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 444555566665555444443 355556666678888888888876653
No 193
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.93 E-value=2e-23 Score=208.94 Aligned_cols=306 Identities=21% Similarity=0.305 Sum_probs=206.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~ 188 (471)
.+...+++.+++..+.. + |...+++++++++++.+| .+++++|+|+++++..++.++ ++|||+|+++.++
T Consensus 10 ~~~e~~a~~~~~~~~~~-~----~~g~~~~~~e~~la~~~g----~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t 80 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL-S----GDGPFSRRCETWLENRTG----TKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (376)
T ss_pred CHHHHHHHHHHHHcCCc-c----CCcHHHHHHHHHHHHHhC----CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 35557788888766432 2 223577777777777655 368999999999999988887 7999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 189 y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
|..+...+...|++++.+++++ +++.+|++++++++++++|+|+ |+||+|...+ +++|.++|++| +++||+|
T Consensus 81 ~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~-~i~vIeD 152 (376)
T TIGR02379 81 FVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKH-QLFVIED 152 (376)
T ss_pred cHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHC-CCEEEEE
Confidence 9999999999999999999985 4588999999999998999886 6788999998 88999999999 9999999
Q ss_pred cCCCccc-cCCCCccccccCCCCCCceEEEecCC----cccCccchhheeeEcC-HHHHHHHHHHHhcc-----------
Q 012095 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGFS----KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF----------- 331 (471)
Q Consensus 269 e~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S----K~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~----------- 331 (471)
++|+.+. +++....+ + ..+++|| |.+. +|.+.|+++++ +++.++++.++...
T Consensus 153 aa~~~g~~~~~~~~g~---~-------~~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 221 (376)
T TIGR02379 153 AAQGVMSTYKGRALGS---I-------GHLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEV 221 (376)
T ss_pred CccccCCccCCcccCC---C-------CCEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCC
Confidence 9998764 44432111 1 1233444 8885 78789998775 78888887665421
Q ss_pred ----------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC--C-CeeeC-CCc---c-eEEe
Q 012095 332 ----------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--G-VKMSE-PQG---A-FYLF 393 (471)
Q Consensus 332 ----------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--g-~~~~~-p~~---g-~~~~ 393 (471)
++-++.+....+...|+ .+++..+..++..++..+.|.+++ + +.... +.+ . ++.+
T Consensus 222 ~~~~~~~~g~n~~~~~~~Aa~g~~qL~-------~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (376)
T TIGR02379 222 DKYTWRDIGSSYLPSELQAAYLWAQLE-------QADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFY 294 (376)
T ss_pred CcceeeeecccCCccHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEE
Confidence 11122233222222232 344444444444444555555542 2 22210 111 2 2235
Q ss_pred EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C------CCC------------CCcEEEEeec--CHH
Q 012095 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD----A------FGD------------DTCIRISYAA--SLT 449 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~----~------f~~------------~~~iRis~~~--~~e 449 (471)
+.++.. .+..++.+.|.++ ||.+.++. . +.. ...+.|-+.. +++
T Consensus 295 i~~~~~-----------~~r~~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~ 362 (376)
T TIGR02379 295 IKLKDE-----------DDRNELIKYLKEQ-EIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKE 362 (376)
T ss_pred EEECCc-----------CCHHHHHHHHHHC-CCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHH
Confidence 666532 1567888887765 89876432 1 100 1235555544 889
Q ss_pred HHHHHHHHHHHHH
Q 012095 450 TLQAAVERIKKGL 462 (471)
Q Consensus 450 ~i~~~~~~l~~~l 462 (471)
+++..++.|++++
T Consensus 363 ~~~~i~~~i~~~~ 375 (376)
T TIGR02379 363 DQARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 194
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.93 E-value=8.4e-24 Score=213.60 Aligned_cols=218 Identities=16% Similarity=0.182 Sum_probs=165.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~ 205 (471)
+.+...+|++.+++++ | .+..++++++++++..++.++++|||+|+++.|.|.... ..++..|++++.
T Consensus 63 ~~p~~~~le~~lA~l~----g----~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 63 SNPTLALLEQRMASLE----G----GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred CCchHHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 4455678888888875 3 234566667788999999999999999999999997643 345678999998
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++.+++++++++|+|++++|+||||.+.+ +++|+++|+++ |++||+|++|...... .++
T Consensus 135 vd~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~-gi~lIvD~a~a~~~~~----~~l- 198 (403)
T PRK07503 135 VDLT-------DPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGA-GAKVVVDNTYCTPYLQ----RPL- 198 (403)
T ss_pred eCCC-------CHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch-
Confidence 8762 789999999889999999999999999999 88999999999 9999999999864221 111
Q ss_pred cCCCCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH--HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~--~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. .+..+++.|+||.++.+| .|.||++++++++++++.. +...+.+++++.+..+...|+ .+....+
T Consensus 199 ~----~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-------tl~~r~~ 267 (403)
T PRK07503 199 E----LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-------TLALRMD 267 (403)
T ss_pred h----hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-------hHHHHHH
Confidence 1 233489999999998655 7789999999998888743 444556677776655444333 3444455
Q ss_pred HHHHHHHHHHHHhcCCCCCe
Q 012095 363 AFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~ 382 (471)
+..++...+.+.|++.|+++
T Consensus 268 ~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 268 RHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 55677777888888776654
No 195
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.93 E-value=6.8e-24 Score=213.94 Aligned_cols=222 Identities=15% Similarity=0.204 Sum_probs=170.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----hHHHHHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~ 201 (471)
.+| +++...+|++.++++. | .++.+++++++.++..++.+++++||+|+++...|.+ +...++..|+
T Consensus 65 ~r~-~~p~~~~le~~lA~l~----g----~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 65 SRY-GNPTVSMFEERLRLIE----G----AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred eCC-CCchHHHHHHHHHHHh----C----CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 344 4455677888888775 3 3477788888888988998999999999998866643 3456677899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
+++.++. .|++++++++++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|....+..
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~-g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAA-GAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCCccccCC---
Confidence 9999874 2899999999999999999999999999998 99999999999 99999999998643321
Q ss_pred cccccCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHH-HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~-~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
++ . .+..+++.|++|.++..|+++ ||++++++.+. .++........+++++.++++...|+. +..
T Consensus 202 -~~-~----~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t-------l~~ 268 (403)
T PRK07810 202 -GL-P----LGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET-------LAL 268 (403)
T ss_pred -hh-h----cCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-------HHH
Confidence 11 1 234589999999998789897 88888887665 455555556667888887776665553 555
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCee
Q 012095 360 MVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
..++..++...+.+.|++.|++..
T Consensus 269 R~~~~~~~a~~~a~~L~~~p~v~~ 292 (403)
T PRK07810 269 RVRHSNASALRIAEFLEGHPAVRW 292 (403)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccE
Confidence 666667777777888888777643
No 196
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=1.1e-23 Score=211.00 Aligned_cols=218 Identities=16% Similarity=0.199 Sum_probs=170.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~ 205 (471)
+.+...+|++.++++. | .++.++++++++++..++.+++++||.|+++.+.|.+... .++..|++++.
T Consensus 38 ~~p~~~~le~~la~l~----g----~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 38 GNPTVDALEKKLAALE----G----GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred CChhHHHHHHHHHHHH----C----CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 4455667777777765 3 2467778888999999999999999999999999988664 34577899888
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++++++++++++++|++.+|+||+|.+.+ +++|+++|++| |+++|+|++|....+. .+ .
T Consensus 110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~-g~~livD~t~~~~~~~----~~-~ 173 (369)
T cd00614 110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEH-GALLVVDNTFATPYLQ----RP-L 173 (369)
T ss_pred eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcchhcC----Ch-h
Confidence 8753 689999999889999999999999999999 88999999999 9999999999764321 11 1
Q ss_pred cCCCCCCceEEEecCCcccCccc-hhheeeEcCH-HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~-~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
. .+..+++.|+||.++.+| .+.||+++++ ++++++......+..+++++.+.++...|+ .+....++
T Consensus 174 ~----~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-------tl~~r~~~ 242 (369)
T cd00614 174 E----LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLK-------TLPLRMER 242 (369)
T ss_pred h----hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-------CHHHHHHH
Confidence 1 244589999999997555 7889999987 899998887766666777776655544443 24445667
Q ss_pred HHHHHHHHHHHhcCCCCCe
Q 012095 364 FRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~ 382 (471)
..+++..+.+.|++.|++.
T Consensus 243 ~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 243 HSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHcCCCcc
Confidence 7888888999999887653
No 197
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=2.1e-23 Score=209.84 Aligned_cols=218 Identities=13% Similarity=0.174 Sum_probs=164.5
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~ 205 (471)
+++...+|++.+++++ | .+..++++++++++..++.+++.+||+|+++.|.|.... ..+...|++++.
T Consensus 57 ~~p~~~~le~~lA~l~----g----~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~ 128 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLE----G----TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDF 128 (391)
T ss_pred CCchHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEE
Confidence 4445677888888886 3 234677888888999999999999999999999887544 345568999988
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++++ |++++++++++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|...... .++
T Consensus 129 vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~-gi~livD~a~a~~~~~----~~~- 192 (391)
T TIGR01328 129 INMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQ-GVKVIVDNTFATPMLT----NPV- 192 (391)
T ss_pred ECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCchhccC----Cch-
Confidence 8763 789999999989999999999999999999 88999999999 9999999999853321 111
Q ss_pred cCCCCCCceEEEecCCcccCccchh-heeeEcCHHHHHHHHHHHh--cccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R-~G~v~~~~~~i~~l~~~~~--~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. .+..+++.|+||.+|.+|.+ .|++++++++++.++.... ..+...+++...++...|+ .+...++
T Consensus 193 ~----~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-------tl~~r~~ 261 (391)
T TIGR01328 193 A----LGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-------TLNIRMK 261 (391)
T ss_pred h----cCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-------cHHHHHH
Confidence 1 23348899999999988877 4788889999988875432 2233455555444443332 2445566
Q ss_pred HHHHHHHHHHHHhcCCCCCe
Q 012095 363 AFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~ 382 (471)
+..++...+.+.|++.|+++
T Consensus 262 ~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 262 RHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 67778888888888877654
No 198
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.93 E-value=3.3e-23 Score=213.85 Aligned_cols=359 Identities=18% Similarity=0.146 Sum_probs=240.9
Q ss_pred HHHHHHHHHhcCC--CeEEcCCCCCCCCChHHHHHHHHHHH-HcCCCCC---CCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 012095 83 ITDQATALAQAGV--SVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRY---TPNAGTLELRSAICHKLKEENGLSYTPD 156 (471)
Q Consensus 83 ~~~~~~~~~~~g~--~~i~l~~g~~~~~~p~~v~~a~~~~~-~~~~~~Y---~~~~G~~~lr~~ia~~~~~~~g~~~~~~ 156 (471)
+.....++.++.. ..-.++.|.+++..|+.+.+++.+.. ..+.+.| +..+|..+++..+.+++.+.+|++ ..
T Consensus 54 ~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~ 131 (481)
T PRK04366 54 VVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AV 131 (481)
T ss_pred HHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ce
Confidence 3334444444332 22448889999988999988888752 2345677 346799999999999999999963 44
Q ss_pred cEEEeCChHHHHHHH--HH-HhcCCCC----eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCC
Q 012095 157 QILVSNGAKQSILQA--VL-AVCSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS 229 (471)
Q Consensus 157 ~i~it~G~~~al~~~--~~-~l~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~ 229 (471)
.+..++|+++.+..+ ++ .++++|| +|++++|.|++|...++..|++++.++++ .++.+|+++|++++++++
T Consensus 132 ~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t 209 (481)
T PRK04366 132 TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDT 209 (481)
T ss_pred EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCC
Confidence 555666766665533 22 3457776 99999999999999999999999999985 346799999999999899
Q ss_pred cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc--
Q 012095 230 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT-- 307 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~-- 307 (471)
++|++++|+ |||.. ..++++|+++|+++ ++++++|.++..... +. .. ++..+-.++++|..|.++.|
T Consensus 210 ~~V~v~~Pn-~tG~~--~~dl~eI~~~a~~~-gal~iVD~a~~~~~~-g~--~~----~~~~GaD~~~~~~hK~l~~P~g 278 (481)
T PRK04366 210 AALMLTNPN-TLGLF--ERNILEIAEIVHEA-GGLLYYDGANLNAIL-GK--AR----PGDMGFDVVHLNLHKTFSTPHG 278 (481)
T ss_pred eEEEEeCCC-Ccccc--chHHHHHHHHHHHc-CCEEEEEecChhhhc-cc--CC----ccccCCCEEEEechhhcCCCCC
Confidence 999999998 99964 34599999999999 999999999853211 11 01 12235568999999998744
Q ss_pred --chhheeeEcCHHHHHHHHHH-------------------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 308 --GWRLGYIAGPKHFVAACNKI-------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 308 --G~R~G~v~~~~~~i~~l~~~-------------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
|--+|++.+.+++.+.+... ++.-.++.+.....++..++..- ..+.+++..++..+
T Consensus 279 ~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~--G~~Gl~~~a~~~~~ 356 (481)
T PRK04366 279 GGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSL--GAEGLREVSEDAVL 356 (481)
T ss_pred CCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 44578888888777665200 00001111222223333333321 24556676677777
Q ss_pred HHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--CCCCcEEEEe
Q 012095 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISY 444 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--~~~~~iRis~ 444 (471)
+.+++.+.|.++.++.+..+.-.- +.++.+.. ...+ .+..++.++|.++ ||.+.. ..+ ...+.+|+++
T Consensus 357 ~a~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~~---~~~g----~~~~~v~~~L~~~-Gi~~~~-~~~p~~~~~~l~is~ 426 (481)
T PRK04366 357 NANYLKARLKDIYDLPYDRPCMHE-FVLSGKKL---KETG----VRTLDIAKRLLDY-GFHPPT-IYFPLIVPEALMIEP 426 (481)
T ss_pred HHHHHHHHhHhhCcccCCCCeeEE-EEEECccc---cccC----CCHHHHHHHHHHC-CccCCc-cccccccCCeEEEcc
Confidence 888899998876333321111111 22232210 0001 1678899998876 887542 222 1256899999
Q ss_pred ec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 445 AA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 445 ~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
+. ++++|+++++.|+++.++....
T Consensus 427 ~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 427 TETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 75 8999999999999998876544
No 199
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.93 E-value=1.5e-23 Score=213.41 Aligned_cols=354 Identities=14% Similarity=0.066 Sum_probs=220.7
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+|+.+++.+..+ +.......+.+..+++.+.+..+. -..+.+++++++++++
T Consensus 30 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGseA~ 107 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTH-TCFMVTPYEGYVALAEKLNRIAPG-SGPKKSVFFNSGAEAV 107 (420)
T ss_pred CCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccC-ccccccCChHHHHHHHHHHHhCCC-CCCCEEEEeCCcHHHH
Confidence 3688899998886 33343 68899999999876321 111112234445566666544321 1235899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCC---------CCCcCCHHHHHh
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRIS---------ENFLLDPKVLES 223 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~---------~~~~ld~e~l~~ 223 (471)
..+++.... .| ..|+....+|++....+... |- .+..+|.... ..+.-+++.+++
T Consensus 108 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (420)
T TIGR00700 108 ENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARA 187 (420)
T ss_pred HHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHH
Confidence 988886421 23 56888888888876443332 11 1122222100 001112456666
Q ss_pred hhc-----cCCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 224 KLT-----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 224 ~l~-----~~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
.+. ++..+|++...+.-+|..+ +++.+++|.++|++| ++++|+||+|.++.+.+. ...+... +....+
T Consensus 188 ~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tg~gr~g~-~~a~~~~----~~~pDi 261 (420)
T TIGR00700 188 IFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH-GIVFIADEVQTGFARTGA-MFACEHE----GPEPDL 261 (420)
T ss_pred HHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEecccCCcccch-hHHHhhc----CCCCCE
Confidence 652 2345555544465678755 555699999999999 999999999998866553 1222222 112225
Q ss_pred ecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
.+|||.++ +|+|+||+++++++++.+.......+++.++++|.++.++|+.-. .....+.+.+.-+..++.+.+...+
T Consensus 262 ~~lsK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~L~~l~~~ 339 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE-SEGLIERARQIGRLVTDRLTTLKAV 339 (420)
T ss_pred EEeecccc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHhh
Confidence 56999998 999999999999999888655555678899999999988876311 1222333333333333333333334
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHH
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 455 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~ 455 (471)
++.+....+. |.++|+.+.+. .. ..........+.+.+++ .||.+.|++.|+ ++|||+++. ++++|++++
T Consensus 340 ~~~~~~vrg~-G~~~~i~~~~~-~~---~~~~~~~~~~l~~~~~~-~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l~~~~ 411 (420)
T TIGR00700 340 DPRIGDVRGL-GAMIAVELVDP-GT---TEPDAGLAERIATAAHA-AGLLLLTCGMFG--NIIRFLPPLTIGDELLSEGL 411 (420)
T ss_pred CCCEEEeecc-ceEEEEEEecC-CC---CCccHHHHHHHHHHHHH-CCeEEeccCCCC--CEEEEECCCCcCHHHHHHHH
Confidence 4445555566 44567666321 00 00000013455555555 599999988774 799999864 899999999
Q ss_pred HHHHHHHH
Q 012095 456 ERIKKGLL 463 (471)
Q Consensus 456 ~~l~~~l~ 463 (471)
++|.+++.
T Consensus 412 ~~l~~~l~ 419 (420)
T TIGR00700 412 DILCAILA 419 (420)
T ss_pred HHHHHHhh
Confidence 99999874
No 200
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=3.3e-23 Score=207.22 Aligned_cols=220 Identities=15% Similarity=0.170 Sum_probs=169.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 201 (471)
.+| +++....|++.++++. ..+++++++|+++++..++.+++++||.|+++.|+|.+.... ....|.
T Consensus 48 ~R~-~npt~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 48 TRS-GNPNRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred cCC-CCchHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 344 5556778888888886 357999999999999999999999999999999999864432 233567
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
+++.++. .|++++++++++++++|++++|+||||.+++ +++|.++|+++ ++++|+|++|....+.
T Consensus 119 ~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~-gi~vIvDea~~~~~~~---- 183 (388)
T PRK08861 119 KVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAV-GALVAVDNTFLTPVLQ---- 183 (388)
T ss_pred EEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCccccccC----
Confidence 8777752 4899999999889999999999999999999 78899999999 9999999999864321
Q ss_pred cccccCCCCCCceEEEecCCcccCc-cchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.+ ..+ +-.+++.|++|.++- .+.+.|++++ ++++.+.++..+...+.+++++....+..-|+. +.-
T Consensus 184 ~p-l~~----GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-------l~l 251 (388)
T PRK08861 184 KP-LEL----GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-------LGA 251 (388)
T ss_pred CC-ccc----CCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-------HHH
Confidence 11 122 334899999999852 3467899987 457778788777777777788875544444432 455
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC
Q 012095 360 MVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
..++..++...+.+.|++.|.+
T Consensus 252 R~~~~~~~a~~~a~~L~~~p~v 273 (388)
T PRK08861 252 RMRVHEESAQQILAYLQTQSLV 273 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCe
Confidence 5666677777888888887655
No 201
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=5.6e-23 Score=207.23 Aligned_cols=214 Identities=14% Similarity=0.181 Sum_probs=163.1
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~ 209 (471)
..+|++.++++ .| .+++++ ++++++++..++.++++|||.|+++.|+|... ...++..|.+++.++.
T Consensus 62 ~~~Le~~lA~l----~g---~~~~v~-~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~- 132 (405)
T PRK08776 62 RDLLGEALAEL----EG---GAGGVI-TATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL- 132 (405)
T ss_pred HHHHHHHHHHH----hC---CCceEE-EcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-
Confidence 45566666665 44 234554 55557999999999999999999999999873 3445566888888764
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
.|++++++++++++|+|++++|+||||.+.+ +++|+++|+++ +++||+|++|... ....++ .+
T Consensus 133 ------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~-gi~vIvD~a~a~~----~~~~pl-~~-- 195 (405)
T PRK08776 133 ------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKV-GALTVVDNTFLSP----ALQKPL-EF-- 195 (405)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHc-CCEEEEECCCccc----ccCCcc-cc--
Confidence 3889999999889999999999999999987 89999999999 9999999999752 111122 12
Q ss_pred CCCceEEEecCCcccCcc-chhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMT-GWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~-G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
+..+++.|.+|.++-+ +...|++++ ++++.+++.........+++++.+.++... .+|++...++..++
T Consensus 196 --gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g-------l~tl~~r~~~~~~n 266 (405)
T PRK08776 196 --GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG-------LRTLDARLRVHQEN 266 (405)
T ss_pred --cCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh-------hCcHHHHHHHHHHH
Confidence 2338999999999644 467899876 577888887766666666777776655533 35677888888889
Q ss_pred HHHHHHHhcCCCCCe
Q 012095 368 RDFLVKSFGELEGVK 382 (471)
Q Consensus 368 r~~l~~~L~~~~g~~ 382 (471)
+..+.+.|++.|.+.
T Consensus 267 a~~la~~L~~~p~v~ 281 (405)
T PRK08776 267 ADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHcCCCee
Confidence 999999998876653
No 202
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=4.4e-24 Score=213.15 Aligned_cols=311 Identities=18% Similarity=0.155 Sum_probs=214.9
Q ss_pred CChHHHHHHHHHHHHcCCCCCC---CCCC--CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC----C
Q 012095 108 DTPVLIAEAGINAIREGFTRYT---PNAG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----P 178 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~---~~~G--~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~----~ 178 (471)
++|+.+.+++.+.+.......+ ...+ ..++.+.+.+.+.+.+| .++++|++|+|+++++..++.+++. +
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g--~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~ 86 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG--ADTEEVIFTSGATESNNLAILGLARAGEQK 86 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC--CCCCeEEEeCCHHHHHHHHHHHHHHhcccC
Confidence 3578899999887754221111 1011 11223344444444456 4678999999999999988888763 5
Q ss_pred C-CeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 179 G-DEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 179 g-d~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
| +.|++....|+++... ++..|++++.++++. ++.+|++++++++++++++|++++++||||.+++ +++|.
T Consensus 87 g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~~~I~ 161 (353)
T TIGR03235 87 GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---IREIA 161 (353)
T ss_pred CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---HHHHH
Confidence 6 7888888777766543 455799999999863 4568999999999888999999999999999999 89999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH--HHH-----
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC--NKI----- 327 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l--~~~----- 327 (471)
++|+++ ++++++|+++..... ... +. .++..+++.|++|.+|.+| +|+++++++..... ...
T Consensus 162 ~l~~~~-~~~~ivD~a~~~g~~----~~~---~~-~~~~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~~~ 230 (353)
T TIGR03235 162 EVLEAH-EAFFHVDAAQVVGKI----TVD---LS-ADRIDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFGGG 230 (353)
T ss_pred HHHHHc-CCEEEEEchhhcCCc----ccc---cc-ccCCCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeCCC
Confidence 999999 999999999874221 111 11 1344578889999987556 89998887653221 110
Q ss_pred --HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-cc--eEEeEecCCccCC
Q 012095 328 --QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GA--FYLFIDFSTYYGS 402 (471)
Q Consensus 328 --~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~g--~~~~~~~~~~~~~ 402 (471)
......+++.....++.++++. ....++...++++++++++.+.|.+ +|+++..+. .. ..+.+.++..
T Consensus 231 ~~~~~~~gt~~~~~~~al~~al~~---~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~--- 303 (353)
T TIGR03235 231 QERGLRPGTLPVHLIVGMGEAAEI---ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGV--- 303 (353)
T ss_pred CcCccccCCCChHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCc---
Confidence 0111233555566666667764 2345778889999999999999988 598876432 21 1233444432
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC----CcEEEEeecCHHHHHHH
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD----TCIRISYAASLTTLQAA 454 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~----~~iRis~~~~~e~i~~~ 454 (471)
+..++.+.| ++ +|.+.+|..|+.. .++|.+++.+++++..+
T Consensus 304 ---------~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 304 ---------NSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred ---------CHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 567777776 55 8999999988654 37888888876665544
No 203
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.93 E-value=9.8e-25 Score=202.18 Aligned_cols=368 Identities=16% Similarity=0.159 Sum_probs=274.9
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCC--CCCCC---hHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE--PDFDT---PVLIAEAGINAIRE-GFTRYTPNAGTLELRSAIC 142 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~--~~~~~---p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia 142 (471)
-++|..-+|.++..+.+.... +..+..|+|+.|. -+... -+.|++|..+.... ..-.|.|..|++++.+..+
T Consensus 28 ~s~V~maPpDpILGVTeAfk~--D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sa 105 (427)
T KOG1411|consen 28 WSHVEMAPPDPILGVTEAFKK--DPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSA 105 (427)
T ss_pred hhcCCCCCCCCcccHHHHHhc--CCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHH
Confidence 346777778888777654432 4566789999998 23333 36677777665542 3467999999999999999
Q ss_pred HHHHHHhCCCCCCCcEE--EeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 143 HKLKEENGLSYTPDQIL--VSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 143 ~~~~~~~g~~~~~~~i~--it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++.-......+...+|+ -|-++|.++......+ .-++..|.+|+|+|.+...++..+|+.+..+........++|.
T Consensus 106 kLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~ 185 (427)
T KOG1411|consen 106 KLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDF 185 (427)
T ss_pred HHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccch
Confidence 98732222224445554 3456777776544433 3478999999999999999999999999888877666677999
Q ss_pred HHHHhhhccCC-cEEEE--cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCc
Q 012095 219 KVLESKLTEKS-RLLIL--CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~~~~-~~i~i--~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 293 (471)
+.+.+.+.+.+ ..+++ .+.|||||+..+.++|++|.++.++. +.+.+.|-+|..|..+.. ....+.-+..+..+
T Consensus 186 ~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~ 264 (427)
T KOG1411|consen 186 KGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE 264 (427)
T ss_pred HHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence 99888776533 23333 55699999999999999999999998 999999999999876532 22333334445678
Q ss_pred eEEEecCCcccCccchhheee--Ec-CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHH---HHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYI--AG-PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV---SKMVKA 363 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v--~~-~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~---~~~~~~ 363 (471)
++++.||.|.+|+.|-|+|.+ ++ +++ +-.+++.+.+++.++||..+..++...|.+..+..+|. .-+.++
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadR 344 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADR 344 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHh
Confidence 899999999999999999985 33 333 45566778888999999999999999998865556774 556788
Q ss_pred HHHHHHHHHHHhcCC--CC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 364 FRERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~--~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
+...|+.|.+.|++. ++ |+++..+-|||.|..+. .+.++.|.+++.|++.--.
T Consensus 345 i~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~----------------peQv~~l~ke~~iYmT~dG-------- 400 (427)
T KOG1411|consen 345 IISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLN----------------PEQVDWLTKEYHIYLTKDG-------- 400 (427)
T ss_pred hhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCC----------------HHHHHHHHhhheeeeccCc--------
Confidence 889999999999874 23 56667788999887653 3567778889899987532
Q ss_pred EEEeec-CHHHHHHHHHHHHHHHH
Q 012095 441 RISYAA-SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 441 Ris~~~-~~e~i~~~~~~l~~~l~ 463 (471)
|||++. +..++..+.++|.++.+
T Consensus 401 RiS~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 401 RISMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred eEeeccccccCCcccchhhHhHhc
Confidence 899998 66777777777776654
No 204
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.93 E-value=5.4e-23 Score=211.01 Aligned_cols=356 Identities=15% Similarity=0.118 Sum_probs=223.5
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. +|.+.+++.+++.+... .+......+....+++.+.+..+.. ..+.++++++++++.
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGseA~ 128 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIH-TGFNVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAEAV 128 (451)
T ss_pred CCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccC-ccccccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHHHH
Confidence 36888999988863 3444 78899999999876322 1121223456667777776554311 115899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCC--CCCcCC--------HHHHH
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRIS--ENFLLD--------PKVLE 222 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~--~~~~ld--------~e~l~ 222 (471)
..+++.... .| ..|+....+|++....+... |. .+..+|.... ...++. ++.++
T Consensus 129 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (451)
T PRK06918 129 ENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFK 208 (451)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHH
Confidence 988886531 23 56888888888876544332 21 1222222110 000111 12333
Q ss_pred hhh----ccCCcEEEEcCCCCC-ccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEE
Q 012095 223 SKL----TEKSRLLILCSPSNP-TGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (471)
Q Consensus 223 ~~l----~~~~~~i~i~~p~NP-tG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (471)
+.+ ..+..+.+|..|-+. .|. ..+++.+++|.++|++| |+++|+||+|.++.+.+. ..++..++...+
T Consensus 209 ~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~-gillI~DEV~tg~gr~g~-~~a~~~~~v~pD---- 282 (451)
T PRK06918 209 NFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH-GILFVADEIQTGFARTGK-YFAIEHFDVVPD---- 282 (451)
T ss_pred HHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCcCccCc-eehhHhcCCCCC----
Confidence 333 223344555566443 465 45566699999999999 999999999999876553 223333321122
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccC--CChHHHHHHHHHHHHHHHHHHHH
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGY--AGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~--~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+.||||.++ +|+|+||+++++++++.+.......+++.++++|.++.++|+.-. ...+++.++.+.+.++.+.+.+
T Consensus 283 i~t~sK~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~- 360 (451)
T PRK06918 283 LITVSKSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKN- 360 (451)
T ss_pred EEeeehhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh-
Confidence 558999998 999999999999999888655556778899999999888876310 0123344444444433333322
Q ss_pred hcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHH
Q 012095 375 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 452 (471)
Q Consensus 375 L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~ 452 (471)
+.+.+....+.|+|+.|....+. ..... .......+.+.+++ .||.+.|+..|+ +++|++++. ++++|+
T Consensus 361 --~~~~~~~vrg~G~~~~~~~~~~~-~~~~~---~~~~~~~l~~~~~~-~Gvlv~~~~~~~--~~lrl~p~l~~t~~~id 431 (451)
T PRK06918 361 --KYNCIGDVRGLGAMCAFELVQDR-KTKEP---DKTLTANICKEANK-RGLLLLSAGTYG--NVIRVLMPLVITDEQLE 431 (451)
T ss_pred --hCCCceeeccceeEEEEEEccCC-CcCCC---cHHHHHHHHHHHHH-CCeEEeecCCCC--CEEEEECCCccCHHHHH
Confidence 23333445577888877654211 00000 00123456666665 499999987664 789999864 899999
Q ss_pred HHHHHHHHHHHhhC
Q 012095 453 AAVERIKKGLLTLR 466 (471)
Q Consensus 453 ~~~~~l~~~l~~~~ 466 (471)
+++++|.++++++.
T Consensus 432 ~~l~~l~~~l~~~~ 445 (451)
T PRK06918 432 EGLTIIEESLQACY 445 (451)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998754
No 205
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=3.8e-23 Score=210.14 Aligned_cols=349 Identities=13% Similarity=0.097 Sum_probs=230.0
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|. ..++. ++.+.+++.+++.+... +.......+....+++.+.+..+. -..+.++++++++++.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~ 114 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTH-TAYQIVPYASYVTLAERINALAPI-DGPAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccc-ccccccCChHHHHHHHHHHHhCCC-CCCceEEEeCCcHHHH
Confidence 3688899998886 33443 68899999999876322 111112234455666666544321 1236899999999999
Q ss_pred HHHHHHhc-CCC-CeEEEcCCCCCChHHHHHHc-CCE-------------EEEecCCCCC-C--CcCCHHHHHhhhc---
Q 012095 169 LQAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA-DAT-------------PVILPTRISE-N--FLLDPKVLESKLT--- 226 (471)
Q Consensus 169 ~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~-~--~~ld~e~l~~~l~--- 226 (471)
..+++... -.| ..|+..+.+|++....+... |.. +..++..... + ..-+++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~ 194 (421)
T PRK06777 115 ENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI 194 (421)
T ss_pred HHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc
Confidence 98888642 133 56888888888876544322 210 1111211100 0 0113566777664
Q ss_pred --cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 227 --EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 227 --~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
++..+|++...++..|. +++++.+++|.++|++| ++++|.||+|.++.+.+. ......+....| +-+|||.
T Consensus 195 ~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~g~-~~~~~~~~~~pD----iv~~sK~ 268 (421)
T PRK06777 195 APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH-GILLIADEVQTGFARTGK-LFAMEYYDVKPD----LITMAKS 268 (421)
T ss_pred CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCccCCc-hhhhhhcCCCCC----EEeeehh
Confidence 23456666555777885 68999999999999999 999999999998765553 222222221112 3379999
Q ss_pred cCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----C
Q 012095 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----E 379 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~ 379 (471)
++ +|+|+||+++++++++.+.......+++.+++++.++.++|+.. ++ +++.++++++.+++.+.|+++ +
T Consensus 269 l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~ 342 (421)
T PRK06777 269 LG-GGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVI---AE--EKLCQRALILGAHLVEVLEKAKASCP 342 (421)
T ss_pred hc-CCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99 99999999999999988875555567889999999999999741 11 356667777777777777653 4
Q ss_pred CCeeeCCCcceEEe-EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHH
Q 012095 380 GVKMSEPQGAFYLF-IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVE 456 (471)
Q Consensus 380 g~~~~~p~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~ 456 (471)
.+....+.|.||.+ +..+.. + .....-...+.+.+++ .||.+.|+..|+ +++||++. .++++++++++
T Consensus 343 ~i~~vrg~G~~~~i~~~~~~~-~-----~~~~~~~~~l~~~~~~-~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~~~~~ 413 (421)
T PRK06777 343 AIVDIRARGSMVAVEFNDPQT-G-----KPSPEFTRQYQRQALE-EGLLLLSCGVHG--NVIRFLYPLTIPDAQFSKALN 413 (421)
T ss_pred CeEEecCceEEEEEEEecCcc-C-----CccHHHHHHHHHHHHh-CCeEEeecCCCC--CEEEEeCCCCCCHHHHHHHHH
Confidence 45556788888754 332211 0 0000012344444555 599999987764 69999986 49999999999
Q ss_pred HHHHHHH
Q 012095 457 RIKKGLL 463 (471)
Q Consensus 457 ~l~~~l~ 463 (471)
+|.+++.
T Consensus 414 ~l~~~l~ 420 (421)
T PRK06777 414 ILTRLLA 420 (421)
T ss_pred HHHHHHh
Confidence 9998874
No 206
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=6.3e-23 Score=206.33 Aligned_cols=218 Identities=12% Similarity=0.109 Sum_probs=162.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~ 205 (471)
+.+...+|++.++++.+ . +..++++++++++..++.+++++||+|++++|+|......+. ..|++++.
T Consensus 59 ~~p~~~~Le~~lA~~~g-------~-~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 59 GNPTRTALEEQLAALEG-------G-AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CCccHHHHHHHHHHHhC-------C-CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 56778899999999863 1 223444566899999999999999999999999986544332 25788777
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++. .|++++++++++++|+|++++|+||||.+.+ +++|+++|+++ +++||+|++|...... .++
T Consensus 131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~-gi~lIvD~a~a~~~~~----~p~- 194 (388)
T PRK07811 131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDA-GAKVVVDNTFASPYLQ----QPL- 194 (388)
T ss_pred eCC-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHc-CCEEEEECCCCccccC----Cch-
Confidence 764 3899999999999999999999999999888 99999999999 9999999999864321 111
Q ss_pred cCCCCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
. .+..+++.|++|.++.+| .+.||+++ ++++.+.+...+.....+.+++....+...|+ .+....++
T Consensus 195 ~----~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-------tl~~R~~~ 263 (388)
T PRK07811 195 A----LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-------TLAVRMDR 263 (388)
T ss_pred h----hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-------cHHHHHHH
Confidence 1 123499999999997544 46799887 46777777766655555556655443333333 24455566
Q ss_pred HHHHHHHHHHHhcCCCCCe
Q 012095 364 FRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~ 382 (471)
..++...+.+.|++.|++.
T Consensus 264 ~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 264 HSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHhCCCee
Confidence 6778888888888877653
No 207
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=213.00 Aligned_cols=350 Identities=15% Similarity=0.198 Sum_probs=227.8
Q ss_pred hcCCCeEEcCCCCCCC--C-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEPDF--D-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~--~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|.+.. + .++.+.+++.+++.+....|.+..+..+|.+.+++.+ . ..+.+++++++++++
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGseA~ 119 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTEAT 119 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHHHH
Confidence 3688899999987543 3 4789999999999875544445444555555555543 2 346899999999999
Q ss_pred HHHHHHhcC--CCCeEEEcCCCCCChHHHHHHc-CCE------------EEEecCC-CCCCCcCCHHHHHhhhcc---CC
Q 012095 169 LQAVLAVCS--PGDEVIIPAPFWVSYPEMARIA-DAT------------PVILPTR-ISENFLLDPKVLESKLTE---KS 229 (471)
Q Consensus 169 ~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~-G~~------------~~~v~~~-~~~~~~ld~e~l~~~l~~---~~ 229 (471)
..+++.... .++.|+..+++|+++...+... |.. .+.++.. ..-.+ .|++.+++.+.. ++
T Consensus 120 e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~~~~~ 198 (426)
T PRK00062 120 MSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY-NDLEAVEELFEEYGDEI 198 (426)
T ss_pred HHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCC-CCHHHHHHHHHhCCCcE
Confidence 999987543 2578999999999986443322 110 0000000 00001 278899888753 45
Q ss_pred cEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 230 RLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
.+|++......+|.+.+ .+++++|.++|++| ++++|+||+|.++.+++.......... .| +.+|||.++ .|
T Consensus 199 aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~G~r~g~~~~~~~~~~~--pD----i~~~gK~l~-~G 270 (426)
T PRK00062 199 AAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH-GALLIFDEVMTGFRVALGGAQGYYGVT--PD----LTTLGKIIG-GG 270 (426)
T ss_pred EEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeechhccccCCccHHHHhCCC--cc----hHhhhhHhh-CC
Confidence 56666544444887775 88899999999999 999999999998744322111112221 12 568999998 89
Q ss_pred hhheeeEcCHHHHHHHHH---HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-e
Q 012095 309 WRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S 384 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~---~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~ 384 (471)
|++|++++++++++.+.. .....+++.+++.+.++.++|+.... ++.+++..+.....++.+.+.+.+. ++.. .
T Consensus 271 ~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v 348 (426)
T PRK00062 271 LPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKE-PGFYEELEALTKRLAEGLKEAAKKA-GIPLTV 348 (426)
T ss_pred CcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHc-CCceEE
Confidence 999999999999998852 22334567899999999999875221 2455666666666666666555555 4433 3
Q ss_pred CCCcceEEeEecCCccCCc-ccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSE-AEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~-~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.+.|.|+.+ .+....... ...... ......+.+.|+++ ||.+.|.. .+.+++++..+++++++++++|.+++
T Consensus 349 rg~G~~~~i-~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~-Gv~v~~~~----~~~~~~~~~~t~~ei~~~~~~l~~~l 422 (426)
T PRK00062 349 NRVGSMFGL-FFTDEPVTNYADAKKSDTERFARFFHAMLDE-GVYLAPSQ----FEAGFVSAAHTDEDIEKTLEAARKAF 422 (426)
T ss_pred EEecceEEE-EEecCCCcchhhhccccHHHHHHHHHHHHHC-CeEeecCC----cCceeeeccCCHHHHHHHHHHHHHHH
Confidence 456666533 332110000 000000 00135678888765 99998843 23578887779999999999999998
Q ss_pred Hhh
Q 012095 463 LTL 465 (471)
Q Consensus 463 ~~~ 465 (471)
+++
T Consensus 423 ~~~ 425 (426)
T PRK00062 423 AAL 425 (426)
T ss_pred Hhh
Confidence 754
No 208
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.92 E-value=8.2e-23 Score=207.70 Aligned_cols=352 Identities=14% Similarity=0.123 Sum_probs=227.3
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+... +.......+....+++.+.+..+. ...+.+++++++++++
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~~~~~~~~~~la~~l~~~~p~-~~~~~~~f~~sGseA~ 114 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTH-TAYQIVPYESYVTLAEKINALAPV-SGQAKTAFFTTGAEAV 114 (421)
T ss_pred CCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccC-cccCccCCHHHHHHHHHHHHhCCC-CCCceEEEeCChHHHH
Confidence 36888999988863 3443 78899999999876321 111112345556666666554321 1225899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCCCcC----CHHHHHhhhc--
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISENFLL----DPKVLESKLT-- 226 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~l----d~e~l~~~l~-- 226 (471)
..+++.... .| ..|+....+|++....+... |. .++.+|...+. ..+ +++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK09792 115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSD 193 (421)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhc
Confidence 988886532 33 57888888888765433222 21 12223332111 012 3477777775
Q ss_pred ---cCCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 227 ---EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 ---~~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
++..+|++...++|+|..+ +++.+++|.++|++| ++++|+||+|.++.+.+.. ..+..+....| +.+|||
T Consensus 194 ~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD----i~t~gK 267 (421)
T PRK09792 194 IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH-GIVMIADEVQSGFARTGKL-FAMDHYADKPD----LMTMAK 267 (421)
T ss_pred cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCch-hHHHhcCCCCc----EEEeeh
Confidence 2456666655589999765 999999999999999 9999999999998665532 22222321122 678999
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
.++ +|+|+||+++++++++.+.......+++.+++++.++.+.++.-. ..++++++++.-+..++.+.+..++.|.
T Consensus 268 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~l~~l~~~~p~-- 343 (421)
T PRK09792 268 SLA-GGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIID-KESLCERANQLGQRLKNTLIDAKESVPA-- 343 (421)
T ss_pred hhc-CCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHhCCC--
Confidence 998 999999999999999887654455677899999998877776421 1244444443322233333322233543
Q ss_pred eeCCCc-ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 383 MSEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 383 ~~~p~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
+..+.| |+++|+.+++... ..........+++.++++ ||.+.+... ..+.||+.++. +++++++++++|.
T Consensus 344 v~~vrG~Gl~~~ie~~~~~~----~~~~~~~~~~l~~~~~~~-Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~~~~l~ 416 (421)
T PRK09792 344 IAAVRGLGSMIAAEFNDPQT----GEPSAAIAQKIQQRALAQ-GLLLLTCGA--YGNVIRFLYPLTIPDAQFDAAMKILQ 416 (421)
T ss_pred cceecccceEEEEEecCCcc----CCcchHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEeCCCcCCHHHHHHHHHHHH
Confidence 234566 8889999864210 000001346677888876 998864221 14789999775 8999999999999
Q ss_pred HHHH
Q 012095 460 KGLL 463 (471)
Q Consensus 460 ~~l~ 463 (471)
++++
T Consensus 417 ~~l~ 420 (421)
T PRK09792 417 DALS 420 (421)
T ss_pred HHHh
Confidence 9875
No 209
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.92 E-value=5.2e-23 Score=205.48 Aligned_cols=217 Identities=20% Similarity=0.187 Sum_probs=163.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~ 201 (471)
.+| +++...+|+++++++. . ++.++++++++++..++.+++++||+|++++|.|..+...+ +..|+
T Consensus 46 ~ry-~~p~~~~Le~~lA~l~--------~-~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 46 GRA-SNPTWRALEAALGELE--------G-AEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred ECC-CCccHHHHHHHHHHHc--------C-CCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 445 7778899999999985 2 34555566667999999999999999999999998887654 34799
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
+++.++.+.+ .+ .+.+++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|... + +.
T Consensus 116 ~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~-g~~lvVD~t~~~~-~-~~-- 177 (366)
T PRK07582 116 TVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAA-GALLVVDNTTATP-L-GQ-- 177 (366)
T ss_pred EEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHc-CCEEEEECCCCCc-c-cc--
Confidence 9999986421 11 23357899999999999999888 99999999999 9999999999631 1 11
Q ss_pred cccccCCCCCCceEEEecCCccc-CccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.++ .+ +..++++|+||.+ |.+|+|+||+++ ++++++++...+.....+++++....+...|.. +..
T Consensus 178 ~p~-~~----g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-------l~~ 245 (366)
T PRK07582 178 RPL-EL----GADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-------LGL 245 (366)
T ss_pred Cch-hc----CCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-------HHH
Confidence 111 12 2238899999998 456799999997 578888888877777777788876655555543 344
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCe
Q 012095 360 MVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
..++..++...+.+.|++.|.+.
T Consensus 246 R~~~~~~na~~la~~L~~~p~v~ 268 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAVR 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Confidence 44666678888888888877654
No 210
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=1.5e-22 Score=203.18 Aligned_cols=328 Identities=15% Similarity=0.127 Sum_probs=213.2
Q ss_pred CeEEcCCCC-CCCCChHHHHHHHHHHHHcC--------CCCCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 96 SVIRLAAGE-PDFDTPVLIAEAGINAIREG--------FTRYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 96 ~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~--------~~~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
++|+|++++ .++..++.+.+++.+++.+. .+..+ -..|..++.+.+.+.+++.+|. ++.+++++|+
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~---~~~l~~~sG~ 81 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA---PEAFIVPSGY 81 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CeEEEECChH
Confidence 589999998 78877777777777776542 11111 1234455555555555555563 3457777777
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 238 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~ 238 (471)
... ..++..+.++||.|++..-.|.+....++......+.++. .|+++|++.+++ ++++|++++++
T Consensus 82 ~a~-~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~v~~v~ 153 (370)
T PRK05937 82 MAN-LGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGRIFIFVCSVY 153 (370)
T ss_pred HHH-HHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCcEEEEEecCC
Confidence 554 4455566678899888888888887777766544444432 489999998862 34566689999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
|+||.+.| +++|.++|+++ ++++++||+|....++.........+. ..+..+++.||||.+|..| +.+++.+
T Consensus 154 s~~G~i~p---l~eI~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~-~~~~~~~~~tlsK~~g~~G---~~vl~~~ 225 (370)
T PRK05937 154 SFKGTLAP---LEQIIALSKKY-HAHLIVDEAHAMGIFGDDGKGFCHSLG-YENFYAVLVTYSKALGSMG---AALLSSS 225 (370)
T ss_pred CCCCCccC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhC-CCCCcEEEEechhhhhcCc---eEEEcCH
Confidence 99999999 88999999999 999999999986544322111111111 1122367899999999767 4456667
Q ss_pred HHHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEec
Q 012095 319 HFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDF 396 (471)
Q Consensus 319 ~~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~ 396 (471)
++.+.+.....+ +..+.+++...++.++++.- .+.-+..++++++.++++.+.|... +. +....+.+
T Consensus 226 ~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l---~~~~~~~~~~l~~l~~~l~~~l~~~-~~-------~~~~~i~~ 294 (370)
T PRK05937 226 EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFL---SQEGELARKQLFRLKEYFAQKFSSA-AP-------GCVQPIFL 294 (370)
T ss_pred HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHH---HhCcHHHHHHHHHHHHHHHHhcCCC-CC-------CCEEEEEe
Confidence 766655532222 23345666666565666531 1112345667788888888877643 11 01112334
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+.. ....+.+.|.++ ||.+.... +...+++|+|++. +++|++++++.|.+++++++.
T Consensus 295 ~~~------------~~~~~~~~L~~~-gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~~ 353 (370)
T PRK05937 295 PGI------------SEQELYSKLVET-GIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQK 353 (370)
T ss_pred CCh------------hHHHHHHHHHHC-CeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 421 456777776655 99887432 2234689999986 999999999999999987653
No 211
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=1.1e-22 Score=204.23 Aligned_cols=219 Identities=16% Similarity=0.211 Sum_probs=169.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~ 205 (471)
+.+-..+|++.+++++ | .+++++++++++++..++.+++++||+|+++.+.|.+.. ..++..|++++.
T Consensus 52 ~~p~~~~le~~la~l~----g----~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~ 123 (380)
T TIGR01325 52 ANPTVAAFEERIAALE----G----AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSF 123 (380)
T ss_pred CCchHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEE
Confidence 3445677888888775 3 257888999999999999999999999999999887643 356778999998
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++++++++++++++|++++|+||+|.+.+ +++|.++|+++ ++++|+|++|....+.. ++
T Consensus 124 v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~-gi~livD~a~~~~~~~~----pl- 187 (380)
T TIGR01325 124 VDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAI-GALLVVDNVFATPVLQQ----PL- 187 (380)
T ss_pred ECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-
Confidence 8752 789999999889999999999999999998 89999999999 99999999997543211 11
Q ss_pred cCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
. .+..+++.|++|.++.+|.++ ||+++++++++.+.........+.+++...+ ++.. .+.+....++.
T Consensus 188 ~----~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~---~l~~----l~tl~~r~~~~ 256 (380)
T TIGR01325 188 K----LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWV---LLKG----LETLSLRMQKQ 256 (380)
T ss_pred h----hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHH---HHhc----cCcHHHHHHHH
Confidence 1 234588999999998778776 7888999999988877655555555555333 3332 23355567777
Q ss_pred HHHHHHHHHHhcCCCCCee
Q 012095 365 RERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~ 383 (471)
.+++..+.+.|++.|+++.
T Consensus 257 ~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 257 FDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred HHHHHHHHHHHHcCCCccE
Confidence 7888888999988876543
No 212
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=4.1e-23 Score=206.96 Aligned_cols=314 Identities=17% Similarity=0.165 Sum_probs=217.5
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-------CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-------AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 100 l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-------~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
|..+.+. +.|+.+.+++.+.+.... .. |. ....++.+.+.+.+++.+|. ++++|++|+|+++++..++
T Consensus 3 ld~a~~~-~~~~~v~~a~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~r~~la~~~g~--~~~~v~~t~~~t~a~~~~l 77 (364)
T PLN02651 3 LDMQATT-PIDPRVLDAMLPFLIEHF-GN-PHSRTHLYGWESEDAVEKARAQVAALIGA--DPKEIIFTSGATESNNLAI 77 (364)
T ss_pred ccCcCCC-CCCHHHHHHHHHHHHhCC-CC-CChhhhHHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEeCCHHHHHHHHH
Confidence 3444443 357788898888764311 11 11 11133344445555555663 5789999999999988776
Q ss_pred HHh----cCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 173 LAV----CSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 173 ~~l----~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
..+ .++||+|++.+..|+++... +...|++++.++++. ++.+|+++++++++++++++++++++||||..+
T Consensus 78 ~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~ 155 (364)
T PLN02651 78 KGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQ 155 (364)
T ss_pred HHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEECCCCCceecc
Confidence 654 47899999999888765433 345799999998863 456899999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+ +++|.++|+++ ++++++|.++... .....+.. .+..+++.|..|.+|.+ .+|+++.+++..+.+.
T Consensus 156 ~---l~~I~~~~~~~-g~~~~vD~a~~~g----~~~~~~~~----~~~D~~~~s~hK~~gp~--G~g~l~v~~~~~~~l~ 221 (364)
T PLN02651 156 P---VEEIGELCREK-KVLFHTDAAQAVG----KIPVDVDD----LGVDLMSISGHKIYGPK--GVGALYVRRRPRVRLE 221 (364)
T ss_pred c---HHHHHHHHHHc-CCEEEEEcchhhC----CcccCccc----CCCCEEEechhhhCCCC--ceEEEEEcCCCCCCCC
Confidence 9 88999999999 9999999999752 21122221 34458899999975533 4899988876554432
Q ss_pred HHH-------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCc-----ceEE
Q 012095 326 KIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQG-----AFYL 392 (471)
Q Consensus 326 ~~~-------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~-----g~~~ 392 (471)
... .....+++.....++.++|+. ..+..+...++.++.++++.+.|.+ ++|+++..|.. ...+
T Consensus 222 p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~---~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~ 298 (364)
T PLN02651 222 PLMSGGGQERGRRSGTENTPLVVGLGAACEL---AMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTL 298 (364)
T ss_pred ccccCCCccCCccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEE
Confidence 111 112334666666777777765 2334577788889999999999986 67888876521 2234
Q ss_pred eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHH
Q 012095 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTL 451 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~i 451 (471)
.+.+++. +..++...|. + |.+..|+.+.. .+.+|+|++. |++||
T Consensus 299 ~~~~~~~------------~~~~~~~~L~-~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 299 NLSFAYV------------EGESLLMGLK-E--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred EEEeCCC------------CHHHHHHHhC-C--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHc
Confidence 4456532 6778888773 3 99988875421 2689999997 77776
Q ss_pred H
Q 012095 452 Q 452 (471)
Q Consensus 452 ~ 452 (471)
+
T Consensus 364 d 364 (364)
T PLN02651 364 D 364 (364)
T ss_pred C
Confidence 4
No 213
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.92 E-value=2.7e-22 Score=201.46 Aligned_cols=310 Identities=18% Similarity=0.266 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y 189 (471)
+.-.+++.+++..+. .| |..++++++++++++.+|. +++++++|+++++.+++.++ +++||+|+++.|+|
T Consensus 11 ~~~~~~~~~~l~~~~-~~----g~~~~~~~~e~~la~~~g~----~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~ 81 (375)
T PRK11706 11 GTELDYIQQAMSSGK-LC----GDGGFTRRCQQWLEQRFGS----AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTF 81 (375)
T ss_pred HHHHHHHHHHHHcCC-cc----CCCHHHHHHHHHHHHHhCC----CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCc
Confidence 344667777766543 23 3346778888888777663 68999999999998877765 68999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 190 ~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
..+...+...|++++.+++++ ++|.+|++++++++++++++|+++ |++|...+ +++|.++|++| +++||+|+
T Consensus 82 ~~~~~~~~~~G~~~v~~d~d~-~~~~~d~~~le~~i~~~tk~i~~~---~~~G~~~~---~~~i~~la~~~-~i~vIeD~ 153 (375)
T PRK11706 82 VSTANAFVLRGAKIVFVDIRP-DTMNIDETLIEAAITPKTRAIVPV---HYAGVACE---MDTIMALAKKH-NLFVVEDA 153 (375)
T ss_pred HHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcCCCCeEEEEe---CCCCCccC---HHHHHHHHHHc-CCEEEEEC
Confidence 999999999999999999975 457899999999999899998865 46998887 88999999999 99999999
Q ss_pred CCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcCHHHHHHHHHHHhcc---------------
Q 012095 270 IYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPKHFVAACNKIQSQF--------------- 331 (471)
Q Consensus 270 ~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~--------------- 331 (471)
+|+.+. +++.. ...+. .+.+.||. |.++ +|.+.++++.++++.++++..+...
T Consensus 154 a~a~g~~~~~~~---~g~~~-----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 224 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIG-----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYT 224 (375)
T ss_pred ccccccccCCee---eecCc-----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcce
Confidence 998765 33321 11111 13344544 9997 6888888888999998887665321
Q ss_pred --cCCCChHHHHHHHHH-HhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC--C-Ceee-CCCc----ceEEeEecCCcc
Q 012095 332 --TSGASSISQKAGVAA-LGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--G-VKMS-EPQG----AFYLFIDFSTYY 400 (471)
Q Consensus 332 --~~~~~~~~q~aa~~~-L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--g-~~~~-~p~~----g~~~~~~~~~~~ 400 (471)
..+.+...+....+. +.. .+.+++..++.+++.+.+.+.|.+++ | +.+. .+.+ .+++|+.+++.
T Consensus 225 ~~~~g~~~~~~~~~aa~~~~q----l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 299 (375)
T PRK11706 225 WVDIGSSYLPSELQAAYLWAQ----LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL- 299 (375)
T ss_pred eeecccccCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc-
Confidence 112222222221221 111 23355666666667777777787765 2 3322 1221 23456666542
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C------CC---C---------CCcEEEEeec--CHHHHHHHHH
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGD----A------FG---D---------DTCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~----~------f~---~---------~~~iRis~~~--~~e~i~~~~~ 456 (471)
.+..++.+.|.++ ||.+.... . ++ . ...+-+-+.. ++++++..++
T Consensus 300 ----------~~r~~l~~~L~~~-gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~ 368 (375)
T PRK11706 300 ----------EDRSALINFLKEA-GIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVID 368 (375)
T ss_pred ----------CCHHHHHHHHHHC-CCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHH
Confidence 1567888888765 89865321 0 00 0 1234444443 7889999999
Q ss_pred HHHHHH
Q 012095 457 RIKKGL 462 (471)
Q Consensus 457 ~l~~~l 462 (471)
.|++++
T Consensus 369 ~i~~~~ 374 (375)
T PRK11706 369 TILEFF 374 (375)
T ss_pred HHHHHh
Confidence 888764
No 214
>PLN02624 ornithine-delta-aminotransferase
Probab=99.92 E-value=1.3e-22 Score=208.93 Aligned_cols=335 Identities=15% Similarity=0.129 Sum_probs=217.9
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|...... +|.+.+++.+++.+.... ...-..+....+++.+.+..| .+.++++++++++..
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~--~~~~~~~~~~~la~~L~~~~~----~~~~~f~~SGseA~e 146 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLS--SRAFYNDKFPEFAEYLTSMFG----YDMVLPMNTGAEGVE 146 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCc--ccccCCHHHHHHHHHHHhhcC----CCeEEEeCChHHHHH
Confidence 57889999888754433 789999999998763211 111223444445555554444 358999999999999
Q ss_pred HHHHHhcC--------C-CC-eEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVCS--------P-GD-EVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~~--------~-gd-~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++.... + ++ .|+....+|++....+...... +..++. .|++.+++.++
T Consensus 147 ~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 219 (474)
T PLN02624 147 TAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-------GDLDALEKIFE 219 (474)
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 88875432 1 33 5777778887764433322211 112221 17889998885
Q ss_pred ---cCCcEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 227 ---EKSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 ---~~~~~i~i~~p~NPtG~~~~~~-~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
+++++|++..++|++|.+++++ .+++|.++|++| |+++|+||+|.++...|... .. ...+.. ..+.+|||
T Consensus 220 ~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~-gillI~DEv~tG~GrtG~~~-a~-~~~~i~---pDiv~lsK 293 (474)
T PLN02624 220 EDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH-NVLMIADEIQTGLARTGKML-AC-DWEEVR---PDVVILGK 293 (474)
T ss_pred hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcCcCcchh-hH-HhcCCC---CCEEEecc
Confidence 3567888888999999988766 599999999999 99999999998764444211 11 111111 12444789
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----C
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----L 378 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~ 378 (471)
.+|.+++++|++++++++++.+.......+++.+++.+.++.++|+.. ++ ..+.+...++.+.+.+.|.+ +
T Consensus 294 ~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l---~~--~~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 294 ALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVV---QD--EKLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred cccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHH---Hh--chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999666999999999998887765544556678999999999998741 11 11222233333333333332 2
Q ss_pred CC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHH
Q 012095 379 EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAV 455 (471)
Q Consensus 379 ~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~ 455 (471)
+. +....+.|.|+. +.+..... ......++++.|+++ ||++.|+. ++++||++. .++++|++++
T Consensus 369 ~~~i~~vrg~G~~~~-i~l~~~~~-------~~~~a~~~~~~L~e~-GV~v~p~~----~~~lR~~p~l~~t~e~id~~l 435 (474)
T PLN02624 369 PKLIKEVRGRGLLNA-VVLNSPKL-------GPVSAYDVCLKLKER-GLLAKPTH----DTIIRLAPPLSISEDELQECS 435 (474)
T ss_pred CCceEEEEeeEEEEE-EEecCCCc-------ChHHHHHHHHHHHhC-CeEEecCC----CCEEEEECCccCCHHHHHHHH
Confidence 22 333445666543 34432100 001356788887664 99999863 578999864 4999999999
Q ss_pred HHHHHHHHh
Q 012095 456 ERIKKGLLT 464 (471)
Q Consensus 456 ~~l~~~l~~ 464 (471)
++|++++++
T Consensus 436 ~~L~~~l~~ 444 (474)
T PLN02624 436 KALSDVLEH 444 (474)
T ss_pred HHHHHHHHH
Confidence 999999875
No 215
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.92 E-value=3e-22 Score=201.31 Aligned_cols=311 Identities=17% Similarity=0.211 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y 189 (471)
+.-.+++.+++..+...++ +...+|++.++++++ .++++.++|+++++.+++.++ +++||+|++++|+|
T Consensus 14 ~~e~~~~~~~l~~~~~~~g--~~~~~le~~la~~~g--------~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~ 83 (379)
T PRK11658 14 DEELAAVKEVLRSGWITTG--PKNQALEQAFCQLTG--------NQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTW 83 (379)
T ss_pred HHHHHHHHHHHHcCCccCC--HhHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcH
Confidence 4557778888877655443 357899999999873 246888999999999999998 89999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 190 ~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
..+...+...|++++.++++. +++.+|++.+++++++++|+|+ |+||+|...+ +++|.++|++| |++||+|+
T Consensus 84 ~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~-gi~vi~D~ 155 (379)
T PRK11658 84 VSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERY-GIPVIEDA 155 (379)
T ss_pred HHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHc-CCeEEEEC
Confidence 999999999999999999875 4577999999999998999887 6678999988 88999999999 99999999
Q ss_pred CCCcc-ccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhccc---------------
Q 012095 270 IYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT--------------- 332 (471)
Q Consensus 270 ~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~--------------- 332 (471)
+|... .+.+.. +. ..+ +.+.||++...+++.+.|+++.+ +++.++++..+....
T Consensus 156 a~a~g~~~~~~~------~g-~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 226 (379)
T PRK11658 156 AHAVGTYYKGRH------IG-ARG--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQ 226 (379)
T ss_pred CCccCCeECCee------cC-CCC--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCc
Confidence 99853 233211 11 112 24677776666677889998874 788887776442110
Q ss_pred -------CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC----cceEE-eEecCCcc
Q 012095 333 -------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYL-FIDFSTYY 400 (471)
Q Consensus 333 -------~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----~g~~~-~~~~~~~~ 400 (471)
++.......|+..... .+.+++..++.++..+.+.+.|.++++..+..|. .++++ .+.++...
T Consensus 227 ~~~~~~G~n~~~~~l~AAl~~~q-----l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (379)
T PRK11658 227 AEVLTPGYKYNLADINAAIALVQ-----LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER 301 (379)
T ss_pred ceeeccccccCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc
Confidence 0000111122222222 2446667777777778888888887543332222 12222 34443210
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCC----C---CC-------C-------CCcEEEEeec--CHHHHHHHHHH
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGD----A---FG-------D-------DTCIRISYAA--SLTTLQAAVER 457 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~----~---f~-------~-------~~~iRis~~~--~~e~i~~~~~~ 457 (471)
.+ .+..++.++|.++ ||.+.+.. . |. . ...+-+-+.. ++++++..++.
T Consensus 302 ----~~----~~r~~~~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 302 ----CG----ISRDALMEALKER-GIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITA 372 (379)
T ss_pred ----cc----CCHHHHHHHHHHC-CCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHH
Confidence 00 1567888888665 88654321 0 00 0 1234444443 88999999999
Q ss_pred HHHHH
Q 012095 458 IKKGL 462 (471)
Q Consensus 458 l~~~l 462 (471)
|++++
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 98875
No 216
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.92 E-value=1.1e-22 Score=206.45 Aligned_cols=332 Identities=15% Similarity=0.152 Sum_probs=224.4
Q ss_pred cCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..|...... ++.+.+++.+++.+..... + ....+....+++.+.+.+| .+.+++++++++++.
T Consensus 35 ~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~-~-~~~~~~~~~l~~~l~~~~~----~~~~~~~~SGs~A~e 108 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSS-R-AFYNDVFGEFAEYVTKLFG----YDKVLPMNTGAEAVE 108 (401)
T ss_pred CCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccc-c-ccCCHHHHHHHHHHHhhcC----CCEEEEeCccHHHHH
Confidence 67889999988655443 7899999998886522111 1 1123455556666655554 258999999999999
Q ss_pred HHHHHhc---------CCC-CeEEEcCCCCCCh-HHHHHHcCC------------EEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVC---------SPG-DEVIIPAPFWVSY-PEMARIADA------------TPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~---------~~g-d~Vlv~~p~y~~~-~~~~~~~G~------------~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++.+. .+| +.|+..+.+|.+. ...+...|- .++.++. .|++++++++.
T Consensus 109 ~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~ 181 (401)
T TIGR01885 109 TAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALE 181 (401)
T ss_pred HHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHHHHH
Confidence 9888752 133 5677788888753 444443321 1222322 27889998885
Q ss_pred ---cCCcEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 227 ---EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 ---~~~~~i~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
++..+|++..+++++|...+ .+.+++|.++|++| ++++|+||+|..+.+.|.. ... ...+.... ++ +|||
T Consensus 182 ~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~g~~G~~-~~~-~~~~~~~d-i~--~~gK 255 (401)
T TIGR01885 182 DHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH-NVLLIADEIQTGLGRTGKL-LCV-DHENVKPD-IV--LLGK 255 (401)
T ss_pred hcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHH-hhcCCCCC-EE--Eeec
Confidence 34557777778999999886 44799999999999 9999999999876444421 111 12111122 22 4789
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC-CC
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE-GV 381 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-g~ 381 (471)
.++.+|+|+||+++++++++.+.......+++.+++.+.++.++|+.. ++ ..+.++.++..+++.+.|+++. ++
T Consensus 256 ~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i---~~--~~l~~~~~~~~~~~~~~L~~l~~~~ 330 (401)
T TIGR01885 256 ALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVL---EE--EKLAENAEKLGEIFRDQLKKLPKPI 330 (401)
T ss_pred cccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHhccCCc
Confidence 998666999999999999988765333446677899999999998752 21 1344566667788888888862 22
Q ss_pred -eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHH
Q 012095 382 -KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERI 458 (471)
Q Consensus 382 -~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l 458 (471)
....+.|.|+. +.++.... + .+..+++++|.++ ||.+.|+. ++.+||+.. .++++|++++++|
T Consensus 331 ~~~~~g~g~~~~-i~~~~~~~----~----~~~~~l~~~l~~~-Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~l 396 (401)
T TIGR01885 331 ITEVRGRGLLNA-IVIDESKT----G----RTAWDLCLKLKEK-GLLAKPTH----GNIIRLAPPLVITEEQLDEGLEII 396 (401)
T ss_pred eeEEeecCeeEE-EEeccCcc----h----hHHHHHHHHHHhC-CEEEEecC----CCEEEEeCCccCCHHHHHHHHHHH
Confidence 22345666654 33432100 0 1457888888765 99998853 578999986 4999999999999
Q ss_pred HHHH
Q 012095 459 KKGL 462 (471)
Q Consensus 459 ~~~l 462 (471)
++++
T Consensus 397 ~~~l 400 (401)
T TIGR01885 397 KKVI 400 (401)
T ss_pred HHHh
Confidence 9876
No 217
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=5.8e-23 Score=204.39 Aligned_cols=287 Identities=13% Similarity=0.151 Sum_probs=197.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE-EE
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-PV 204 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~~ 204 (471)
.+| +++...+|+++++++. ..+++++++|+++++.+++ .++++||+|+++.+.|......+.....+ -+
T Consensus 49 ~R~-~~p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~ 118 (364)
T PRK07269 49 TRT-KNPTRAKLEETLAAIE--------SADYALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRF 118 (364)
T ss_pred eCC-CCccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHHHHHHHhcCcE
Confidence 344 5567789999999986 4579999999999999888 46799999999999997766544332111 01
Q ss_pred EecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccc
Q 012095 205 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (471)
.+ .|..|++++++++++++|+|++++|+||||.+.+ +++|+++|+++ ++++|+|++|..-.+. .++
T Consensus 119 ~~------~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~-gi~vvvD~t~~~~~~~----~pl 184 (364)
T PRK07269 119 HF------TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAK-GAKVIVDNTFYSPIYQ----RPI 184 (364)
T ss_pred EE------EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cch
Confidence 11 1336899999999999999999999999999998 99999999999 9999999997542211 111
Q ss_pred ccCCCCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 285 ASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. .+-.+++.|++|.++-.| .=.||+++ ++++.++++..+...+.+.+++..+.+...|+ .+...++
T Consensus 185 -~----~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~-------tL~~r~~ 252 (364)
T PRK07269 185 -E----LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLK-------TLSLRME 252 (364)
T ss_pred -h----hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-------cHHHHHH
Confidence 1 233499999999996222 12488887 57788888766655556677776655554444 2666777
Q ss_pred HHHHHHHHHHHHhcCCCCC-ee-eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHH---------HHHHcCCEEEECC
Q 012095 363 AFRERRDFLVKSFGELEGV-KM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCR---------YLLDKAQVALVPG 431 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~-~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~Ll~~~gV~v~pg 431 (471)
+..++...+.+.|++.|++ .+ +++.||++.+. +... .....|.+ .|.....+.+.|+
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~-~~~~-----------~~~~~f~~~l~~~~~~~slG~~~sl~~~p~ 320 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK-VADE-----------TRIPHILNSLKVFTFAESLGGVESLITYPT 320 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE-ECCH-----------HHHHHHHHhCCcceEccCCCCcCeEeeCCc
Confidence 7788888889999888875 33 36778885554 3211 01222322 2222334566665
Q ss_pred CCCC-------------CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 432 DAFG-------------DDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 432 ~~f~-------------~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+.+. .++.||+|++.. +.+..++.|.+++
T Consensus 321 ~~~~~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al 362 (364)
T PRK07269 321 TQTHADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQAL 362 (364)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 4331 136899999983 3445555555555
No 218
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=3.1e-22 Score=200.00 Aligned_cols=240 Identities=14% Similarity=0.137 Sum_probs=179.7
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEE
Q 012095 106 DFDTPVLIAEAGINAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (471)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vl 183 (471)
.++.++++.++..... .+...|+. .++..+|++.|+++. ..+++++++|+++++..++.+++++||+|+
T Consensus 34 ~~~~~~~~~~~~~~~~-~~~~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 34 VFDTVAEMRHAAKNRA-NGEMFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred ccCCHHHHHHHhccCc-cCCceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 3455555555443221 12245665 345578999999884 235789999999999999999999999999
Q ss_pred EcCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 012095 184 IPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (471)
Q Consensus 184 v~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~ 259 (471)
+++|.|.++... ....|+++..++.. +.+.+++++++++|+|++++|+||||.+.+ +++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-------~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDPM-------IGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHH
Confidence 999999887753 34578888776532 567899999999999999999999998876 9999999999
Q ss_pred CCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHHHHHHHhcccCCCChH
Q 012095 260 HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSI 338 (471)
Q Consensus 260 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~ 338 (471)
+ ++++|+|++|..... ..+...+-.+++.|.+|.+ |-.+...|+++.++++.+.+.........+++++
T Consensus 175 ~-g~~lvvD~t~a~p~~---------~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~ 244 (394)
T PRK09028 175 H-DIVVMLDNTWASPIN---------SRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPD 244 (394)
T ss_pred c-CCEEEEECCcccccc---------CCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHH
Confidence 9 999999999974210 1111235569999999999 5445677988888888888876666667777877
Q ss_pred HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 339 SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 339 ~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
....+..-|+ .+.-+.++..++...+.+.|++.|.+
T Consensus 245 ~a~l~~rgl~-------TL~lR~~~~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 245 DVYLAMRGLR-------TLGVRLAQHEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHcccC-------cHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 6554444333 36666777788888899999987765
No 219
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.92 E-value=2.4e-22 Score=201.63 Aligned_cols=217 Identities=13% Similarity=0.138 Sum_probs=164.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcCCEEEEe
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVIL 206 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v 206 (471)
.++...+|++.+++++ | .+++++++|+++++..++.+++++||+|+++.|+|.++...+ ...|++++.+
T Consensus 51 ~np~~~~lE~~lA~l~----g----~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~ 122 (385)
T PRK08574 51 ENPTLRPLEEALAKLE----G----GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLA 122 (385)
T ss_pred CCccHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEE
Confidence 4456788999999886 2 357888899999999999999999999999999999987766 4457777665
Q ss_pred cCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 207 PTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
. +|++++++++++ ++++|++++|+||||.+++ +++|+++|+++ +++||+|++|..... ..++
T Consensus 123 ~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~-gi~livD~t~a~~~~----~~~l- 185 (385)
T PRK08574 123 Y--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKEL-GAILVVDNTFATPLL----YRPL- 185 (385)
T ss_pred C--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHc-CCEEEEECCCCcccc----CChh-
Confidence 3 478999999987 8999999999999999999 88999999999 999999999964211 0111
Q ss_pred cCCCCCCceEEEecCCcccCccchh-heeeE-cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWR-LGYIA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R-~G~v~-~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
. .+..+++.|++|.++-+|-. .|+++ .++++++++...+...+.+.+++....+...|+ .+....++
T Consensus 186 ~----~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~-------tL~~R~~~ 254 (385)
T PRK08574 186 R----HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLK-------TLEVRFER 254 (385)
T ss_pred h----hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccC-------cHHHHHHH
Confidence 1 24469999999999755555 37555 578888888877766666667665444443333 24455555
Q ss_pred HHHHHHHHHHHhcCCCCCe
Q 012095 364 FRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~ 382 (471)
..++...+.+.|++.|.+.
T Consensus 255 ~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 255 QCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHcCCCcC
Confidence 6667777888888776553
No 220
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=5.5e-22 Score=197.91 Aligned_cols=301 Identities=17% Similarity=0.229 Sum_probs=209.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChH
Q 012095 115 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYP 193 (471)
Q Consensus 115 ~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~ 193 (471)
+++.+.+..+.. +......++++.+++++ | .+++++++|+++++..++.++ +.+||+|+++.++|.++.
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~----~----~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~ 72 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYL----G----VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA 72 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH
Confidence 455666655443 33446788888888886 3 357888889999999999988 589999999999999999
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH 273 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~ 273 (471)
..+...|++++.++++. +++.+|++.+++.+++++++|+++ ||+|...+ +++|.++|+++ ++++|+|++|..
T Consensus 73 ~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~l~~~~-~i~li~D~a~~~ 144 (352)
T cd00616 73 NAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPV---HLYGNPAD---MDAIMAIAKRH-GLPVIEDAAQAL 144 (352)
T ss_pred HHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEE---CCCCCcCC---HHHHHHHHHHc-CCeEEEECCCCC
Confidence 99999999999999864 357799999999998889988875 47999888 88889999999 999999999975
Q ss_pred cccCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcC-HHHHHHHHHHHhcc---------------cCCC
Q 012095 274 IIYAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF---------------TSGA 335 (471)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~---------------~~~~ 335 (471)
...... . .+.. ...+.+.||+ |.++ +.+.|+++++ +++++.+....... +..+
T Consensus 145 g~~~~~--~---~~~~--~~d~~~~S~~~~K~~~--~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (352)
T cd00616 145 GATYKG--R---KVGT--FGDAGAFSFHPTKNLT--TGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRL 215 (352)
T ss_pred CCeECC--E---Eccc--CcceeEEcCCCCCCCc--ccCceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCc
Confidence 322110 0 1111 1236677776 8874 4456888875 57887776543321 1122
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc-----ceEEeEecCCccCCcccCCCCC
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG-----AFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~-----g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
+.+...++... ...+++..++.+++.+++.+.|.+++|+++..+.. ...+.+.+++.. .
T Consensus 216 ~~~~aa~~~~~-------l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 279 (352)
T cd00616 216 SEIQAAIGLAQ-------LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA---------G 279 (352)
T ss_pred CHHHHHHHHHH-------HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC---------C
Confidence 33332222222 23456677777888999999999988888764322 233445554310 0
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCC----------------C-------CCcEEEEeec--CHHHHHHHHHHHH
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFG----------------D-------DTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~----------------~-------~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.+..++.+.|.++ ||.+....... . .+.+|+++.. ++++++.+++.|+
T Consensus 280 ~~~~~v~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 280 ESRDELIEALKEA-GIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCHHHHHHHHHHC-CCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 2678899988665 88664322110 0 1579999986 9999999988763
No 221
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=1.5e-22 Score=203.78 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=162.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~ 205 (471)
+++...+|++.++++. | .+++++++|+++++..++.++++|||+|++++|+|..+.. .+...|++++.
T Consensus 63 ~~pt~~~Le~~lA~l~----g----~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~ 134 (394)
T PRK07050 63 ATPTSLALAQRLAEIE----G----GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRF 134 (394)
T ss_pred CCHHHHHHHHHHHHHh----C----CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence 4445566777776664 3 4689999999999999999999999999999999998774 45678999988
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.. +.+.+++++++++|+|++++|+||+|...+ +++|+++|+++ +++||+|++|....+ +.
T Consensus 135 vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~~d---i~~I~~ia~~~-gi~livD~a~a~~~~-------~~ 196 (394)
T PRK07050 135 YDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEVPD---VPAITAAARAR-GVVTAIDNTYSAGLA-------FK 196 (394)
T ss_pred ECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccHhh---HHHHHHHHHHc-CCEEEEECCcccccc-------cC
Confidence 8642 457889999999999999999999986555 99999999999 999999999975321 11
Q ss_pred cCCCCCCceEEEecCCcccC-ccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
.+. .+..+++.|++|.++ -.+.+.|++++ +++++++++..+...+.+.+++....+...|+ .+....++
T Consensus 197 ~l~--~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~-------tl~~Rl~~ 267 (394)
T PRK07050 197 PFE--HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLP-------SLQVRLAA 267 (394)
T ss_pred HHH--cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-------cHHHHHHH
Confidence 111 234599999999995 23345798775 78888988887776666677766443333222 23334555
Q ss_pred HHHHHHHHHHHhcCCCCC
Q 012095 364 FRERRDFLVKSFGELEGV 381 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~ 381 (471)
..++...+.+.|++.|++
T Consensus 268 ~~~~a~~la~~L~~~p~v 285 (394)
T PRK07050 268 HDRSALEVAEWLKARPEI 285 (394)
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 556666777777776654
No 222
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=7.2e-22 Score=199.54 Aligned_cols=341 Identities=14% Similarity=0.127 Sum_probs=229.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+.. .+++. -..+....+++.+.+..+ ..+.++++++++++.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGseA~ 111 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLW-HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTEAN 111 (408)
T ss_pred CCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcc-ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHHHH
Confidence 3688899998886 33444 7889999999887532 22221 223445566777654432 126899999999999
Q ss_pred HHHHHHhcC--------CC-CeEEEcCCCCCChHHHHHHc-CCEEEE---ecCCCC---CCCcCCHHHHHhhhccCCcEE
Q 012095 169 LQAVLAVCS--------PG-DEVIIPAPFWVSYPEMARIA-DATPVI---LPTRIS---ENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 169 ~~~~~~l~~--------~g-d~Vlv~~p~y~~~~~~~~~~-G~~~~~---v~~~~~---~~~~ld~e~l~~~l~~~~~~i 232 (471)
..+++.... ++ ..|+....+|++....+... |..... -|.... -.| .|++.+++++.++..+.
T Consensus 112 e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~aa 190 (408)
T PRK04612 112 EAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDVAA 190 (408)
T ss_pred HHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCEEE
Confidence 988876431 22 46888899898876544322 211100 111100 012 27899998887666777
Q ss_pred EEcCCCCCcccCCC--HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchh
Q 012095 233 ILCSPSNPTGSVYP--KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (471)
Q Consensus 233 ~i~~p~NPtG~~~~--~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 310 (471)
+|..|.+++|.+++ ++.+++|.++|++| ++++|+||+|.++...|. .+... ..+.+..+.||||.++ +|+|
T Consensus 191 vi~eP~~~~gg~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~---~~a~~--~~~~~pdi~t~~K~l~-~G~p 263 (408)
T PRK04612 191 VMLEPIQGEGGVMPAAPGFLARVRALCDQH-DALLVLDEIQCGMGRTGT---LFAHW--QEQVTPDIVTLAKALG-GGFP 263 (408)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCc---hhhhh--hcCCCCCEEEEcchhc-CCCc
Confidence 78888888886655 67899999999999 999999999998655442 11111 1345567889999998 9999
Q ss_pred heeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeCC
Q 012095 311 LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEP 386 (471)
Q Consensus 311 ~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~~~~p 386 (471)
+||+++++++++.+.......+++.+++++.++.+.|+.- ++ +++.++.+++-+++.+.|+++ +-+.....
T Consensus 264 iga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg 338 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKL---AS--PQIAANVARQSAALRAGLEALNAEFGVFAQVRG 338 (408)
T ss_pred eEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec
Confidence 9999999999888766555567788999999999998752 11 244555555555555555543 21223344
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
.|- ++.+.+..... .....+.+.|+++ ||++.|.. .+.+|+.... +++++++++++|++++.+
T Consensus 339 ~Gl-~~~i~~~~~~~---------~~a~~i~~~l~~~-Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 339 RGL-MLGAVLAPAHA---------GQAGAILDLAAEH-GLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred cce-EEEEEecCchh---------hHHHHHHHHHHHC-CeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 444 34555532100 1356777777765 99997732 3789998765 899999999999999986
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
+
T Consensus 404 ~ 404 (408)
T PRK04612 404 Y 404 (408)
T ss_pred H
Confidence 4
No 223
>PRK05968 hypothetical protein; Provisional
Probab=99.91 E-value=7.9e-22 Score=198.45 Aligned_cols=281 Identities=14% Similarity=0.140 Sum_probs=191.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~ 208 (471)
-..+|++.+++++ | . +..+++++++.++..++.++++|||+|+++.+.|.... ..+...|++++.++.
T Consensus 64 ~~~~le~~lA~l~----g---~-~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLE----G---A-EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHh----C---C-CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 3567777777775 3 2 23444556668999889889999999999999998643 456678999998864
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
.|++++++++ +++|+|++++|+||++.. .++++|+++|++| +++||+|++|....+.. ++ .
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~-gi~vivD~a~a~~~~~~----p~-~-- 196 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRH-GVVTMIDNSWASPVFQR----PI-T-- 196 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHc-CCEEEEECCCcchhccC----ch-h--
Confidence 2889999988 578999998777766555 5599999999999 99999999997644221 11 1
Q ss_pred CCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHh-cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~-~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
.+..+++.|++|.++.+| .+.|+++++++++++++.... ....+.+++.+..+...|+. +....++..+
T Consensus 197 --~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-------l~~r~~~~~~ 267 (389)
T PRK05968 197 --LGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-------LPLRMKAHEA 267 (389)
T ss_pred --cCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-------HHHHHHHHHH
Confidence 123488899999997544 578999999999988876543 23445666665555444432 4555666667
Q ss_pred HHHHHHHHhcCCCCCeeeC-CC------------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 367 RRDFLVKSFGELEGVKMSE-PQ------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~~~~-p~------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
+...+.+.|++.|+++++. |. +|+ +.+++.+. .+..+|++.|- ..++.+.-|..
T Consensus 268 ~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~-~sf~~~~~-----------~~~~~f~~~L~-~~~~~~s~G~~ 334 (389)
T PRK05968 268 SALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGL-FSFIFREG-----------IDVRAFADALK-LFRLGVSWGGH 334 (389)
T ss_pred HHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceE-EEEEECCH-----------HHHHHHHHhCC-ccEEecCCCCC
Confidence 7888889999888875442 31 234 44555421 14567887764 33554444433
Q ss_pred CC----------------------C-CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 434 FG----------------------D-DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 434 f~----------------------~-~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+. . ++.||+|++.. +.+..++.|+++++.
T Consensus 335 ~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~ 386 (389)
T PRK05968 335 ESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAA 386 (389)
T ss_pred CceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHH
Confidence 32 1 46899999982 233444445555543
No 224
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.90 E-value=9.9e-22 Score=189.97 Aligned_cols=321 Identities=22% Similarity=0.209 Sum_probs=233.5
Q ss_pred ChHHHHHHHHHHHHcCC------CCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh--cC-
Q 012095 109 TPVLIAEAGINAIREGF------TRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV--CS- 177 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~------~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l--~~- 177 (471)
+.+.+++++...+.... +.|+- .....+-|+.|++.+ | .++++|++|+|+||+.++++... ..
T Consensus 13 ~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll----g--a~~~eIiFTSG~TEsnNlaI~g~~~a~~ 86 (386)
T COG1104 13 VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL----G--ADPEEIIFTSGATESNNLAIKGAALAYR 86 (386)
T ss_pred CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEecCCcHHHHHHHHhhHHhhh
Confidence 35788888888776531 12210 122345566666665 4 57799999999999999999873 22
Q ss_pred ---CCCeEEEcCCCCCChHHHHHHc---CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 178 ---PGDEVIIPAPFWVSYPEMARIA---DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 178 ---~gd~Vlv~~p~y~~~~~~~~~~---G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
.|..|++..-.|+...+.++.+ |.++.++|++. +..+|+++|+++|+++|.+|.|...||-||+++| ++
T Consensus 87 ~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp---I~ 161 (386)
T COG1104 87 NAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP---IA 161 (386)
T ss_pred cccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---HH
Confidence 4789999999999888877766 99999999985 4469999999999999999999999999999999 99
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH-HHHH----H
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV-AACN----K 326 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i-~~l~----~ 326 (471)
+|.++|+++ ++++.+|.+... |.-+..+..+ .-.+...|-.|.+|..| +|.++.++.+. +-+. .
T Consensus 162 ei~~i~k~~-~i~fHvDAvQa~----Gkipi~~~~~----~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~GGgQ 230 (386)
T COG1104 162 EIGEICKER-GILFHVDAVQAV----GKIPIDLEEL----GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHGGGQ 230 (386)
T ss_pred HHHHHHHHc-CCeEEEehhhhc----Cceecccccc----CcceEEeehhhccCCCc--eEEEEECCCCccCceeccCcC
Confidence 999999999 899999999875 3322222222 22355566679999777 88888654322 1111 0
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC-CCCeeeCCC---cceEEeEecCCccCC
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL-EGVKMSEPQ---GAFYLFIDFSTYYGS 402 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~g~~~~~p~---~g~~~~~~~~~~~~~ 402 (471)
-+..-..+.+.++..+..++++. ..+.++....++.+.|+++.+.|.+. |++.+.... -...+.+.+|..
T Consensus 231 E~g~RsGTenv~~Ivg~~~A~~~---a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv--- 304 (386)
T COG1104 231 ERGLRSGTENVPGIVGFGKAAEI---AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV--- 304 (386)
T ss_pred CCCCCCCCccHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC---
Confidence 01111223456666666677765 35667788888999999999999975 777665332 233455666643
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
..+.+... ++..||++..|+.+.. .+.|||||+. ++++++.+++.|.++
T Consensus 305 ---------~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 305 ---------EGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred ---------cHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHH
Confidence 55666654 5667999999998853 1479999998 889999999999999
Q ss_pred HHhhCC
Q 012095 462 LLTLRP 467 (471)
Q Consensus 462 l~~~~~ 467 (471)
+++++.
T Consensus 375 i~~lr~ 380 (386)
T COG1104 375 IKRLRE 380 (386)
T ss_pred HHHHhh
Confidence 988764
No 225
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=2.2e-21 Score=195.27 Aligned_cols=212 Identities=14% Similarity=0.145 Sum_probs=155.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~ 209 (471)
..+|++.++++. | ..+.+++++| +.++..++. ++++||+|++++|.|.+.. ..++..|++++.++..
T Consensus 56 ~~~le~~lA~l~----g---~~~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 56 REALEDIIAELE----G---GTKGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred HHHHHHHHHHHh----C---CCCeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 456777777775 4 2245666555 567887775 7789999999999998543 3456689999999862
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|...... .++ .
T Consensus 127 -------d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~-g~~vvvD~a~~~~~~~----~~~-~--- 187 (390)
T PRK08064 127 -------NLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAI-GCLTFVDNTFLTPLLQ----KPL-D--- 187 (390)
T ss_pred -------CHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHc-CCEEEEECCCCccccc----Cch-h---
Confidence 789999999999999999999999999998 88999999999 9999999999753211 111 1
Q ss_pred CCCceEEEecCCcccC-ccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFA-MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g-~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
.+..+++.|++|.++ -+|...|++++ ++++++.+...+..++...++..... ++.. ...+....++..++
T Consensus 188 -~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l---~~~g----l~tl~~R~~~~~~~ 259 (390)
T PRK08064 188 -LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWL---VLRG----LKTLHVRLEHSSET 259 (390)
T ss_pred -hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHH---HHcc----cCcHHHHHHHHHHH
Confidence 244589999999985 33455677665 57899999888776665555555443 2222 23355666666777
Q ss_pred HHHHHHHhcCCCCC
Q 012095 368 RDFLVKSFGELEGV 381 (471)
Q Consensus 368 r~~l~~~L~~~~g~ 381 (471)
+..+.+.|++.|.+
T Consensus 260 a~~la~~L~~~~~v 273 (390)
T PRK08064 260 ANKIALYLQEHPKV 273 (390)
T ss_pred HHHHHHHHhcCCCc
Confidence 88888888876543
No 226
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=6.3e-21 Score=194.59 Aligned_cols=355 Identities=11% Similarity=0.079 Sum_probs=220.3
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.+|+.+||+..|. ..++. ++.+.+++.+++.+.. .+.......+.+..+++.+.+..+. .-+.++++++++++.
T Consensus 38 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGsEAv 114 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI-HYTPIYGFPVEPLLLAEKLIEIAPG--DNPKVSFGLSGSDAN 114 (443)
T ss_pred CCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc-CccccccCcHHHHHHHHHHHHhCCC--CCCEEEEcCCHHHHH
Confidence 3688899998885 44554 7889999999987632 2222223345666777777655432 226899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHH-HHHcCC------------EEEEecCCCCC--CCc--------CCHHHHHh
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEM-ARIADA------------TPVILPTRISE--NFL--------LDPKVLES 223 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~-~~~~G~------------~~~~v~~~~~~--~~~--------ld~e~l~~ 223 (471)
..+++.... .| ..|+....+|++.... ....|. .+..+|..... .+. -+++.+++
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (443)
T PRK08360 115 DGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKE 194 (443)
T ss_pred HHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHH
Confidence 988886531 23 5688778788775432 222221 12223322100 010 12445556
Q ss_pred hhc-----cCCcEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 224 KLT-----EKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 224 ~l~-----~~~~~i~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
.+. +++++|++...+||+|.+++ .+.+++|.++|++| |+++|+||+|.++.+.+.. .......- ... +
T Consensus 195 ~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~gr~G~~-~a~~~~~~-~pD---i 268 (443)
T PRK08360 195 KFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH-GILLVVDEVQSGLGRTGKW-FAIEHFGV-EPD---I 268 (443)
T ss_pred HHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCccc-hhhhhcCC-CCC---E
Confidence 553 35667777644799998887 56899999999999 9999999999987655431 11111211 122 2
Q ss_pred ecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
-+|||.++ +|+|+||+++++++++.+.......+++.+++.+.++.++|+.-.. .+.++++.+.-...++.+.+...+
T Consensus 269 itlsK~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~~ 346 (443)
T PRK08360 269 ITLGKPLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEE-KNLLKRAEKLGNYTKKRLEEMKKK 346 (443)
T ss_pred EEeccccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 36799999 9999999999999999887554556777899999999998875211 122333333223333333332223
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHH
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAV 455 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~ 455 (471)
.+-+..+...|-+ +-+.+.+.... ... .......+...|+++ ||.+.+.. .+.+|++.. .+++++++++
T Consensus 347 ~~~v~~vrg~Gl~-~gie~~~~~~~--~~~-~~~~~~~~~~~l~~~-Gi~~~~~~----~~~lr~~P~l~~t~~~id~~~ 417 (443)
T PRK08360 347 HELIGDVRGIGLM-IGVDLVKDRET--KER-AYEEAAKVVWRAWEL-GLIVTFFS----GNVLRIQPPLTIEKEVLDEGL 417 (443)
T ss_pred CCCeeeeeccceE-EEEEEecCCcc--cCc-cHHHHHHHHHHHHHC-CeEEeecC----CCEEEEeCCCCCCHHHHHHHH
Confidence 3323333444443 44444211000 000 001235677877765 99886532 367999655 4999999999
Q ss_pred HHHHHHHHhhC
Q 012095 456 ERIKKGLLTLR 466 (471)
Q Consensus 456 ~~l~~~l~~~~ 466 (471)
++|.++++++.
T Consensus 418 ~~l~~~l~~~~ 428 (443)
T PRK08360 418 DILEEAIEDVE 428 (443)
T ss_pred HHHHHHHHHHH
Confidence 99999998753
No 227
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.90 E-value=1.6e-21 Score=198.01 Aligned_cols=161 Identities=16% Similarity=0.204 Sum_probs=131.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~ 205 (471)
+.+-..+|++.+++++ | .+..++++++++++..++.+++++||+|+++++.|.+.. ..++..|++++.
T Consensus 55 ~~p~~~~le~~lA~l~----g----~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 126 (418)
T TIGR01326 55 MNPTTDVLEQRIAALE----G----GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRF 126 (418)
T ss_pred CChhHHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEE
Confidence 3444567777777775 3 246788999999999999999999999999999986543 446778999999
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++++++++++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|..... ..
T Consensus 127 v~~~-------d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~-~i~livD~t~~~~~~-------~~ 188 (418)
T TIGR01326 127 VDPD-------DPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAH-GVPLIVDNTFATPYL-------CR 188 (418)
T ss_pred ECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCchhhc-------CC
Confidence 8742 899999999989999999999999999998 88999999999 999999999974211 11
Q ss_pred cCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
.+ ..+..+++.||||.++.+|+|+||++++.
T Consensus 189 ~l--~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 189 PI--DHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ch--hcCCeEEEECccccccCCccceEEEEEec
Confidence 11 13567999999999998999999998854
No 228
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=2.8e-21 Score=193.73 Aligned_cols=290 Identities=16% Similarity=0.192 Sum_probs=193.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~ 201 (471)
..|+.. |.+. ++.+++.+++.+|. ++++++++++.++..++. ++++||+|+++++.|.++.. .+...|+
T Consensus 39 ~~Y~r~-~~p~-~~~le~~la~l~g~----~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 111 (378)
T TIGR01329 39 YDYTRS-GNPT-RTALESLLAKLDKA----DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGV 111 (378)
T ss_pred CccCCC-CChH-HHHHHHHHHHHhCC----CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCc
Confidence 456543 3332 45555555555552 566777777789987775 78999999999999988764 3456899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
+++.++.. |++.+++++++++|+|++++|+||||.+.+ +++|+++|+++ ++++|+|++|.... ..
T Consensus 112 ~v~~vd~~-------d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~-g~~vivD~a~~~~~----~~ 176 (378)
T TIGR01329 112 VVVHVDTT-------DLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQ-NALVVVDNTMMSPL----LC 176 (378)
T ss_pred EEEEeCCC-------CHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccc----cC
Confidence 99999852 889999999999999999999999999998 99999999999 99999999985321 11
Q ss_pred cccccCCCCCCceEEEecCCcccCc-cchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.++ .. +-.+++.|++|.++- .+.+.|++++ ++++.+++...+.....+.+++....+...| +.+..
T Consensus 177 ~~l-~~----g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-------~tl~~ 244 (378)
T TIGR01329 177 NPL-EL----GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI-------KTLAI 244 (378)
T ss_pred Chh-hc----CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC-------CCHHH
Confidence 111 11 334999999998852 3467899987 5566677776665455556665543322222 23445
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCee-eC-----------------CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHH
Q 012095 360 MVKAFRERRDFLVKSFGELEGVKM-SE-----------------PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~~-~~-----------------p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll 421 (471)
..++-.++...+.+.|++.|.+.. .. ..+++ +.+.+... ....+|++.|
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~-~sf~~~~~-----------~~~~~~~~~L- 311 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSV-LSFETGSV-----------ALSKRLVEAT- 311 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceE-EEEEECCH-----------HHHHHHHHhC-
Confidence 555556666666667766554321 11 12344 44455321 1256788876
Q ss_pred HcCCEEEECCCCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 422 DKAQVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 422 ~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+..++.+.-|.... .++.||+|++.. +.+..++.|++++++
T Consensus 312 ~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 312 KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 55577776665432 135899999983 345556666666654
No 229
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=3.9e-21 Score=192.07 Aligned_cols=220 Identities=13% Similarity=0.152 Sum_probs=164.3
Q ss_pred CCCCCCCCC---HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHH
Q 012095 126 TRYTPNAGT---LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARI 198 (471)
Q Consensus 126 ~~Y~~~~G~---~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~ 198 (471)
..|+. .|. ..|++.++++. ..+++++++|+++++..++.+++++||+|++++|.|...... .+.
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~ 112 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKR 112 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHh
Confidence 44652 444 57888888775 246899999999999999999999999999999999876643 356
Q ss_pred cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC
Q 012095 199 ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 278 (471)
Q Consensus 199 ~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~ 278 (471)
.|+++..++.. +.+.+++++++++|+|++++|+||+|...+ +++|+++|+++ ++++|+|++|......
T Consensus 113 ~gi~v~~~d~~-------~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~-g~~livD~t~a~g~~~- 180 (377)
T TIGR01324 113 MGVDITYYDPL-------IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNP-GIVIMIDNTWAAGLLF- 180 (377)
T ss_pred cCcEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHc-CCEEEEECCCcccccc-
Confidence 78888777532 238899999999999999999999998877 99999999999 9999999999853221
Q ss_pred CCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHH
Q 012095 279 ATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (471)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~ 357 (471)
.+ + ..+..+++.|++|.++ -++...|+++++++.++.+......++.+.++.....+...++ .+
T Consensus 181 ---~p---l--~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-------tl 245 (377)
T TIGR01324 181 ---KP---L--EHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR-------TL 245 (377)
T ss_pred ---Cc---c--ccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh-------hH
Confidence 11 1 2355699999999995 3346679999999888877765555555566655444333333 34
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 358 SKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
....++..++...+.+.|++.|.+
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 455666677777777788776554
No 230
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.90 E-value=1.3e-20 Score=189.96 Aligned_cols=310 Identities=18% Similarity=0.182 Sum_probs=210.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~ 188 (471)
.+...+++.+++..+.. ....+..+|+++++++++ .++.++++|+++++..++.++ ++|||+|+++.|+
T Consensus 9 ~~~~~~~v~~~~~~~~~--~~g~~~~~le~~la~~~g--------~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~ 78 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDFL--TQGPTVPAFEEALAEYVG--------AKYAVAFNSATSALHIACLALGVGPGDRVWTTPIT 78 (380)
T ss_pred CHHHHHHHHHHHhcCCc--cCChhHHHHHHHHHHHHC--------CCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcc
Confidence 34457777787766543 334567899999999873 235666778899999999998 7899999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeE
Q 012095 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (471)
Q Consensus 189 y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ 264 (471)
|..+...+...|++++.++++++ ++.+|++++++.++ +++++|++ .|++|...+ +++|.++|++| +++
T Consensus 79 ~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~---~~~i~~l~~~~-~~~ 150 (380)
T TIGR03588 79 FVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVD---MQAIAALAKKH-GLK 150 (380)
T ss_pred hHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEE---eCCCCccCC---HHHHHHHHHHc-CCE
Confidence 99999999999999999998753 46799999999998 68898885 456898888 89999999999 999
Q ss_pred EEEccCCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEc-CHHHHHHHHHHHhcc---------
Q 012095 265 VLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-PKHFVAACNKIQSQF--------- 331 (471)
Q Consensus 265 ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~--------- 331 (471)
||+|+++.... +++.. +... ....+.+.||+ |.++. | ..|+++. ++++.++++..+...
T Consensus 151 lI~D~a~a~g~~~~~~~---~g~~---~~~d~~~~S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 222 (380)
T TIGR03588 151 IIEDASHALGAEYGGKP---VGNC---RYADATVFSFHPVKIITT-A-EGGAVTTNDEELAERMRLLRSHGITKDPLLFE 222 (380)
T ss_pred EEEECCCcccCccCCEe---CCCc---cccceEEEecCCCCcccc-c-CceEEEECCHHHHHHHHHHHHCCCCCCccccc
Confidence 99999998642 33321 1110 01236677775 88863 3 4577775 567777776543211
Q ss_pred ----------------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-C---cceE
Q 012095 332 ----------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-Q---GAFY 391 (471)
Q Consensus 332 ----------------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~---~g~~ 391 (471)
+..++.+....+...|+ .+++..++-+++.+++.+.|.+++++....+ . .+++
T Consensus 223 ~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~-------~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 295 (380)
T TIGR03588 223 KQDEGPWYYEQQELGFNYRMTDIQAALGLSQLK-------KLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWH 295 (380)
T ss_pred ccccCcceeeeeccccccCccHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEE
Confidence 11112222222222222 2566667777788888999998877664432 1 1222
Q ss_pred E-eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC-----------CC---C-------CcEEEEeec--C
Q 012095 392 L-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-----------GD---D-------TCIRISYAA--S 447 (471)
Q Consensus 392 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f-----------~~---~-------~~iRis~~~--~ 447 (471)
+ .+.++...+ .+..++.+.|.++ ||.+...... .. + ..+++.+.. +
T Consensus 296 ~~~i~~~~~~~---------~~r~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 296 LYPILLDQEFG---------CTRKEVFEALRAA-GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred EEEEEECCcCC---------CCHHHHHHHHHHC-CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 2 333432100 2567888887655 8887643211 00 1 357777775 8
Q ss_pred HHHHHHHHHHHHHHH
Q 012095 448 LTTLQAAVERIKKGL 462 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l 462 (471)
+++++..++.|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999988764
No 231
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.90 E-value=3.3e-21 Score=193.75 Aligned_cols=313 Identities=19% Similarity=0.245 Sum_probs=225.8
Q ss_pred CChHHHHHHHHHHHHcCCC-----CCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHHHHHHHHh---cCC
Q 012095 108 DTPVLIAEAGINAIREGFT-----RYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAVLAV---CSP 178 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~-----~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~~~~l---~~~ 178 (471)
+.|+.+.+++.+.+.+... .+.......++.+.+.+.+++..|. ++ ++|++++|+++++..++..+ +++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~--~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGA--PPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTS--STTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCC--ccccccccccccchhhhhhhhcccccccc
Confidence 3578899999888764211 1111111244445555555555664 45 79999999999999999999 789
Q ss_pred CCeEEEcCCCCCChH----HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 179 GDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 179 gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
||+|++..-.|++.. ...+..|++++.++.+.++ .+|++++++.+++++++++++..+|-||..++ +++|.
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~--~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i~~I~ 162 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGG--SLDLEDLEEALNPDTRLVSISHVENSTGVRNP---IEEIA 162 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTS--SCSHHHHHHHHHTTESEEEEESBETTTTBBSS---HHHHH
T ss_pred ccccccccccccccccccccccccchhhhccccccccc--hhhhhhhhhhhccccceEEeecccccccEEee---eceeh
Confidence 999999998887766 3445779999999886543 58999999999999999999999999999999 99999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh-----
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS----- 329 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~----- 329 (471)
++|+++ ++++++|-+++... ....+.. .+..+++.|..|.+|-+| +|+++.+++.++++.....
T Consensus 163 ~~~~~~-~~~~~vD~~~~~g~----~~id~~~----~~~D~~~~s~~Kl~gp~G--~g~l~v~~~~~~~~~p~~~~~~~~ 231 (371)
T PF00266_consen 163 KLAHEY-GALLVVDAAQSAGC----VPIDLDE----LGADFLVFSSHKLGGPPG--LGFLYVRPEAIERLRPAKPGGGYL 231 (371)
T ss_dssp HHHHHT-TSEEEEE-TTTTTT----SS--TTT----TTESEEEEESTSTTSSST--EEEEEEEHHHHHHHHTSSSSSSTT
T ss_pred hhhhcc-CCceeEechhcccc----ccccccc----cccceeeecccccCCCCc--hhhheehhhhhhcccccccccccc
Confidence 999999 99999999987522 1122221 344589999999445444 7999999999888732111
Q ss_pred ----------------cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-----Cc
Q 012095 330 ----------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-----QG 388 (471)
Q Consensus 330 ----------------~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-----~~ 388 (471)
....+++.+...++..+++.- .+..++++.++..+..+++.+.|.+++++.+..| .+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 309 (371)
T PF00266_consen 232 DFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLL--EEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRP 309 (371)
T ss_dssp THHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGT
T ss_pred ccccchhcccccccccccccceeeehhhhHHHHHhhh--hccccccchhhhhhHHHHHHhhhhcCCceeEeeeccccccc
Confidence 011245666666666666641 1345777888899999999999999988777543 23
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------CCCcEEEEeec--CHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------DDTCIRISYAA--SLTTLQAA 454 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--------~~~~iRis~~~--~~e~i~~~ 454 (471)
+. +.+.++.. +..++.++|.++ ||.+..|..+. ..+.||+|++. +++|++++
T Consensus 310 ~i-~~~~~~~~------------~~~~~~~~L~~~-~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 310 SI-VSFNLPGS------------DADDVVKYLEER-GIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp TE-EEEEETTS------------SHHHHHHHHHHH-TEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ce-EEEeecCC------------CHHHHHHHHhhc-CEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 44 55566543 678889988877 99999987654 34899999987 88998874
No 232
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=8.6e-21 Score=192.60 Aligned_cols=216 Identities=19% Similarity=0.242 Sum_probs=158.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~ 207 (471)
+-...|.+.++++. | .+..++++|+++++..++..++++||+|+++++.|.... ..++..|++++.++
T Consensus 64 p~~~~Le~~lA~le----g----~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd 135 (431)
T PRK08248 64 PTTDVFEKRIAALE----G----GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD 135 (431)
T ss_pred chHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence 33456666666664 3 357788999999999999999999999999999987643 34567899999997
Q ss_pred CCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC
Q 012095 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (471)
. .|++++++++++++++|++++|+||||.+++ +++|+++|+++ ++++|+|++|.. +....+ +
T Consensus 136 ~-------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~-gi~vIvD~t~a~----~~~~~p---l 197 (431)
T PRK08248 136 P-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEH-GIPLIVDNTFAS----PYLLRP---I 197 (431)
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEeCCCCc----cccCCh---h
Confidence 5 2899999999989999999999999999999 78999999999 999999999862 111111 1
Q ss_pred CCCCCceEEEecCCcccCccchhheeeEcC-HHH---------------------------------HHHHHHHHhcccC
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF---------------------------------VAACNKIQSQFTS 333 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~---------------------------------i~~l~~~~~~~~~ 333 (471)
.++..+++.|++|.+|.+|.++|++++. .+. .+...........
T Consensus 198 --~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 275 (431)
T PRK08248 198 --EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGA 275 (431)
T ss_pred --HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCC
Confidence 2456699999999999899999987763 211 0111122233344
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
+.+++....+..-| +-+....++..++...+.+.|++.|+++
T Consensus 276 ~l~p~~a~l~~rgl-------~tl~~R~~~~~~nA~~la~~L~~~p~v~ 317 (431)
T PRK08248 276 ALSPFNSFLLLQGL-------ETLHLRMERHSENALAVAKFLEEHEAVE 317 (431)
T ss_pred CCCHHHHHHHhcCc-------CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 45555433322222 3355566677778888899999887754
No 233
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=190.86 Aligned_cols=352 Identities=13% Similarity=0.115 Sum_probs=221.1
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. +|.+.+++.+++.+..+ +.......+....+++.+.+..+.. ..+.++++++++++.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~SGseA~ 114 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTH-TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTTGAEAV 114 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccC-cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 36888999988863 3444 78899999999876321 1111222345555666666544311 126899999999999
Q ss_pred HHHHHHhcC-C-CCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCCCcCC----HHHHHhhhc--
Q 012095 169 LQAVLAVCS-P-GDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISENFLLD----PKVLESKLT-- 226 (471)
Q Consensus 169 ~~~~~~l~~-~-gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~ld----~e~l~~~l~-- 226 (471)
..+++.... . ...|+....+|++....+... |. .++.+|.+.+. .+.+ ++.+++.+.
T Consensus 115 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~ 193 (425)
T PRK07495 115 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD 193 (425)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc
Confidence 988886431 2 357888888888765433221 11 12333332211 1122 445566653
Q ss_pred ---cCCcEEEEc-CCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCC
Q 012095 227 ---EKSRLLILC-SPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 227 ---~~~~~i~i~-~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
++..+|++. ..+| +| .++|++.+++|.++|++| ++++|+||+|.++...|.. +... ..+.+..+.+||
T Consensus 194 ~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~----~a~~-~~gv~pDi~tls 266 (425)
T PRK07495 194 VDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQH-GILLIADEVQTGFARTGKL----FAME-HHEVAADLTTMA 266 (425)
T ss_pred cCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHc-CCEEEEechhhcCCcCCCc----eeec-ccCCCCCEEeeh
Confidence 235566553 3356 78 568999999999999999 9999999999986544421 1111 123445688999
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE---- 377 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---- 377 (471)
|.++ +|+|+||+++++++++.+.......+++.++++++++.++|+.-.. . .+.+..+++.+++.+.|++
T Consensus 267 K~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~----~l~~~~~~~g~~l~~~L~~l~~~ 340 (425)
T PRK07495 267 KGLA-GGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE-E----DLCERANQLGNRLKQRLASLRET 340 (425)
T ss_pred hhhc-CCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh-c----hHHHHHHHHHHHHHHHHHHHHhh
Confidence 9998 8999999999999998876544556778899999988887764110 1 1222333333333333322
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHH
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 455 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~ 455 (471)
.|.+.-+... |+++|+.+.+... ... .......+.+.++++ ||++.+.... .+.+||.... +++++++++
T Consensus 341 ~~~i~~vrG~-Gl~~~iel~~~~~--~~~--~~~~~~~~~~~~~~~-Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~~~ 412 (425)
T PRK07495 341 VPEIADIRGP-GFMNAVEFNDADS--GLP--SAEFANRVRLKALEK-GLILLTCGVH--GNVIRFLAPITIQDDVFAEAL 412 (425)
T ss_pred CCCeeeeecC-ceEEEEEEecCCC--CCc--cHHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEeCCCccCHHHHHHHH
Confidence 3333222222 7788988843200 000 000134567777765 9998764222 3679998765 999999999
Q ss_pred HHHHHHHHhhCC
Q 012095 456 ERIKKGLLTLRP 467 (471)
Q Consensus 456 ~~l~~~l~~~~~ 467 (471)
++|++++++++.
T Consensus 413 ~~l~~~l~~~~~ 424 (425)
T PRK07495 413 DILEASILEASA 424 (425)
T ss_pred HHHHHHHHHHhc
Confidence 999999988763
No 234
>PLN02509 cystathionine beta-lyase
Probab=99.89 E-value=1.5e-20 Score=191.16 Aligned_cols=224 Identities=14% Similarity=0.169 Sum_probs=163.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcC
Q 012095 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIAD 200 (471)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G 200 (471)
...|+.. |.+ .++++++++++..| .++.++++|+++++..++ .++++||+|++++|.|..+.. .+...|
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G 196 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG 196 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCC
Confidence 4568654 665 68888888887665 456777788888887655 578999999999999998863 345779
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~ 280 (471)
++++.++. .|++++++++++++|+|++++|+||||.+.+ +++|+++|++| +++||+|++|......
T Consensus 197 ~~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~-g~~lIVD~A~a~~~~~--- 262 (464)
T PLN02509 197 VVVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQ-GALVLVDNSIMSPVLS--- 262 (464)
T ss_pred eEEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHc-CCEEEEECCccccccC---
Confidence 99988863 3789999999999999999999999999766 99999999999 9999999998643221
Q ss_pred ccccccCCCCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHH
Q 012095 281 HTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
.++ . .+..+++.|++|.++-+| .=.|++++ ++.+.+.+...+.....+.+++...++...| +.+.
T Consensus 263 -~pl-~----~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-------~tL~ 329 (464)
T PLN02509 263 -RPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGI-------KTMA 329 (464)
T ss_pred -Chh-h----cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhh-------hhHH
Confidence 111 1 234599999999986323 23577776 4455565555444334345555533333333 4466
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
...++..+++..+.+.|++.|.++
T Consensus 330 ~R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 330 LRIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 777888888899999999887763
No 235
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=192.15 Aligned_cols=351 Identities=15% Similarity=0.128 Sum_probs=222.5
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+. ..+....+..+.+..+++.+.+..+.. ..+.++++++++++.
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~-~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~ 130 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARF-THTCFMVTPYEGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAV 130 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHH
Confidence 3688899998886 34444 789999999998763 333333344577778888887655421 125888899999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCC--------------EEEEecCCCCCC----CcC--------CHHH
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADA--------------TPVILPTRISEN----FLL--------DPKV 220 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~~~~----~~l--------d~e~ 220 (471)
..+++... ...+.|+..+++|+++...+..... .+..+|.....+ +.. ..+.
T Consensus 131 e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (443)
T PRK06058 131 ENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITV 210 (443)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHH
Confidence 98888432 1237899999999988755433211 112222111000 001 1233
Q ss_pred HHhhhc-cCCcEEEEcCCCCCc-cc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 221 LESKLT-EKSRLLILCSPSNPT-GS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 221 l~~~l~-~~~~~i~i~~p~NPt-G~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
+++.+. +++.+| |..|-+.. |. ..+++.+++|.++|++| |+++|.||++.++...|... ......-..| +
T Consensus 211 l~~~~~~~~iAav-i~EPi~g~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfgRtG~~f-a~~~~gv~PD----i 283 (443)
T PRK06058 211 IEKQVGADNLAAV-IIEPIQGEGGFIVPAEGFLPALLEWCREN-GVVFIADEVQTGFARTGAWF-ACEHEGIVPD----L 283 (443)
T ss_pred HHHhhCCCceEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcChhhh-HHHhcCCCCC----E
Confidence 344443 344444 45665444 44 45688999999999999 99999999999875444211 1111111112 3
Q ss_pred ecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
-+++|.+| +|+++|++++++++++.+.......+++.+++++.++.+.|+.- ++ +++.++.+++.+++.+.|++
T Consensus 284 v~~gK~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~---~~--~~l~~~~~~~g~~l~~~L~~ 357 (443)
T PRK06058 284 ITTAKGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETI---EE--DDLVARARQIEALMTDRLRA 357 (443)
T ss_pred EEEccccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHH---HH--cCHHHHHHHHHHHHHHHHHH
Confidence 34689998 99999999999999988765555567889999999999998741 11 23455555666666666655
Q ss_pred C----CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHH
Q 012095 378 L----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTL 451 (471)
Q Consensus 378 ~----~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i 451 (471)
+ +.+.-+...|.|+.+.-.++... .. .......+.+.++++ ||++.++..|+ +++|+... .+++++
T Consensus 358 l~~~~~~i~~vrg~G~~~~i~~~~~~~~--~~---~~~~~~~l~~~~~~~-Gv~~~~~~~~~--~~lr~~Ppl~~t~~~i 429 (443)
T PRK06058 358 LAAEDDRIGDVRGRGAMIAIELVKPGTT--EP---DAELTKALAAAAHAA-GVIVLTCGTYG--NVIRLLPPLVIGDELL 429 (443)
T ss_pred HHhhCCcEEeeeccceEEEEEEecCCCC--CC---cHHHHHHHHHHHHHC-CeEEeccCCCC--CEEEEECCCccCHHHH
Confidence 3 22222456676654432221100 00 000134566666665 99999876553 68999644 599999
Q ss_pred HHHHHHHHHHHHhh
Q 012095 452 QAAVERIKKGLLTL 465 (471)
Q Consensus 452 ~~~~~~l~~~l~~~ 465 (471)
++++++|+++++++
T Consensus 430 ~~~~~~l~~~l~~~ 443 (443)
T PRK06058 430 REGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 236
>PRK05939 hypothetical protein; Provisional
Probab=99.89 E-value=1.7e-20 Score=188.84 Aligned_cols=211 Identities=17% Similarity=0.143 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCC
Q 012095 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISE 212 (471)
Q Consensus 136 ~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~ 212 (471)
+|++.++++. | .+..++++++++++..++.++++|||+|+++++.|+.+.. .++..|++++.++.
T Consensus 51 ~lE~~la~le----g----~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---- 118 (397)
T PRK05939 51 ALEAKITKME----G----GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---- 118 (397)
T ss_pred HHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence 6777777764 3 2334555556899999999999999999999999987543 45678999999875
Q ss_pred CCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 213 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 213 ~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
.|++++++++++++++|++++|+||||.+.+ +++|+++|+++ ++++|+|++|.... .+ . +...+
T Consensus 119 ---~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~t~a~~~-------~~-~-~~~~g 182 (397)
T PRK05939 119 ---TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRER-GLLYVVDNTMTSPW-------LF-R-PKDVG 182 (397)
T ss_pred ---CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHc-CCEEEEECCccccc-------cc-C-ccccC
Confidence 2899999999999999999999999999976 99999999999 99999999986311 11 1 11135
Q ss_pred ceEEEecCCcccCccchhheeeEcCHHH----------------------HHHHHH-HHhcccCCCChHHHHHHHHHHhc
Q 012095 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHF----------------------VAACNK-IQSQFTSGASSISQKAGVAALGL 349 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~R~G~v~~~~~~----------------------i~~l~~-~~~~~~~~~~~~~q~aa~~~L~~ 349 (471)
..+++.|+||.++..|.++|+++.+... +..+.. .........++.....+..-+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl-- 260 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGA-- 260 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc--
Confidence 6799999999998889999998764211 111111 122334445555433322222
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 350 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
+-+....++..++...+.+.|++.|.+
T Consensus 261 -----~tl~~R~~~~~~na~~la~~L~~~p~V 287 (397)
T PRK05939 261 -----ETLALRVDRSCSNALALAQFLEAHPKV 287 (397)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 234455555566777888888877654
No 237
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=1.2e-20 Score=191.33 Aligned_cols=216 Identities=14% Similarity=0.162 Sum_probs=154.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEec
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~ 207 (471)
+...+|++.++++. | .+..++++++++++..++.+++++||+|+++.+.|......+.. .|+++..++
T Consensus 58 pt~~~Le~~lA~l~----g----~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALE----G----GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHh----C----CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 44567777777774 3 24566778888999999999999999999999999865554432 466666665
Q ss_pred CCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC
Q 012095 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (471)
. .|++++++++++++++|++++|+||||.+++ +++|.++|+++ +++||+|++|..... ..++ .
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~-~i~vVvD~a~a~~~~----~~p~-~- 192 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRH-GVPLIVDNTVATPVL----CRPF-E- 192 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CChh-h-
Confidence 3 3899999999989999999999999999999 89999999999 999999999974221 1111 1
Q ss_pred CCCCCceEEEecCCcccCccchhheeeEcC-HHH--HH----------------------------HH----HHHHhccc
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF--VA----------------------------AC----NKIQSQFT 332 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~--i~----------------------------~l----~~~~~~~~ 332 (471)
.+..+++.|++|.++.+|.++|.+++. ..+ .+ .+ ......++
T Consensus 193 ---~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 269 (425)
T PRK06084 193 ---HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMG 269 (425)
T ss_pred ---cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcC
Confidence 234599999999998889999887653 211 00 00 11122345
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
...+++....+..-| +-+....++..++...+.+.|++.|++.
T Consensus 270 ~~l~~~~a~l~lrgl-------~tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 270 AALSPFNAFLILQGL-------ETLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred CCCCHHHHHHHHcCc-------CcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 556666544333333 3356666677778888888888887653
No 238
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=1.6e-20 Score=187.29 Aligned_cols=223 Identities=12% Similarity=0.137 Sum_probs=162.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~ 201 (471)
..|+ .+....++.+++.+....+ .++.+ +++++++|+..++.++++|||+|++++|.|.++.. .++..|+
T Consensus 56 y~Ys--R~gnPt~~~Le~~la~le~---~~~~v-~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi 129 (395)
T PRK05967 56 YTYG--TRGTPTTDALCKAIDALEG---SAGTI-LVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGV 129 (395)
T ss_pred CccC--CCCChHHHHHHHHHHHHhC---CCCEE-EECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCe
Confidence 3453 3445566666666655444 33454 55557899999999999999999999999999874 4577899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~ 281 (471)
++..++.. +.+.+++++++++|+|++++|+||+|.+.+ +++|+++|+++ ++++|+|++|....+-
T Consensus 130 ~v~~vd~~-------~~e~l~~al~~~TklV~lesPsNP~l~v~d---l~~I~~la~~~-g~~vvVD~t~a~p~~~---- 194 (395)
T PRK05967 130 EVEYYDPE-------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQD---IPAIAEAAHRH-GAIVMMDNTWATPLYF---- 194 (395)
T ss_pred EEEEeCCC-------CHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHHh-CCEEEEECCccCceec----
Confidence 99888532 457899999999999999999999876655 99999999999 9999999999752211
Q ss_pred cccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~ 360 (471)
... ..+-.|++.|.+|.++ -.+...|++++++++.+++.........+.+++....+..- -+-+.-.
T Consensus 195 -~pl----~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rg-------l~Tl~lR 262 (395)
T PRK05967 195 -RPL----DFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRG-------LRTMGIR 262 (395)
T ss_pred -Chh----HcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcC-------cccHHHH
Confidence 111 1345599999999974 34466798888888877777666656666777664333322 2335555
Q ss_pred HHHHHHHHHHHHHHhcCCCCC
Q 012095 361 VKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 361 ~~~~~~~r~~l~~~L~~~~g~ 381 (471)
.++..++...+.+.|++.|.+
T Consensus 263 ~~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 263 LEHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHHHHhCCCC
Confidence 666677777788888887665
No 239
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=2.9e-20 Score=190.24 Aligned_cols=352 Identities=14% Similarity=0.103 Sum_probs=218.3
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+++||+..|. ..++. ++.+.+++.+++.+..... ...-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~~~--~~~~v~f~~SGseA~ 116 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP-SGVIYYESILKLAEELAEITPG--GLDCFFFSNSGAEAI 116 (433)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCcHHHHH
Confidence 3688899999885 34444 7889999999887522111 1111235566666666655421 346899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCC--CCc--------CCHHHHH
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISE--NFL--------LDPKVLE 222 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~~--~~~--------ld~e~l~ 222 (471)
..+++.... .| ..|+..+.+|++....+. ..+. .+..+|..... .+. -+++.++
T Consensus 117 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 196 (433)
T PRK08117 117 EGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLE 196 (433)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHH
Confidence 988886321 23 568887888877554332 1111 11223322100 000 1456666
Q ss_pred hhhc-----cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEE
Q 012095 223 SKLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (471)
Q Consensus 223 ~~l~-----~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (471)
+.+. ++..+|++.......|.. .+++++++|.++|++| |+++|+||+|.++...|.... .... +....
T Consensus 197 ~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~gr~G~~~~-~~~~----gv~pD 270 (433)
T PRK08117 197 SLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH-GILLIFDEVQTGFGRTGEWFA-AQTF----GVVPD 270 (433)
T ss_pred HHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhccCccccchh-Hhhc----CCCCC
Confidence 6653 234455554445556764 5889999999999999 999999999998654443211 1111 21223
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
+.||||.+| +|+++|++++++++++.+.......+++.+++++.++.++|+.. + .+.+.+.++++.+++.+.|.
T Consensus 271 i~t~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l---~--~~~l~~~~~~~g~~l~~~L~ 344 (433)
T PRK08117 271 IMTIAKGIA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVI---K--EEKLLDNANEMGAYALERLE 344 (433)
T ss_pred Eeehhhhcc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHH
Confidence 579999999 99999999999999988765444556778999999999998742 1 11233334444444444444
Q ss_pred CCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCHHHH
Q 012095 377 ELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASLTTL 451 (471)
Q Consensus 377 ~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~i 451 (471)
++. ++....+..|.++++.+.+..+ .........+.+.++++ ||.+.+... ..+++|+++ ..++++|
T Consensus 345 ~l~~~~~~~~~vrg~Gl~~gi~~~~~~~-----~~~~~~~~~~~~~l~~~-Gv~~~~~g~--~~~~lRl~p~~~~t~~~i 416 (433)
T PRK08117 345 VLKEKHPVIGDVRGIGLMIGIEIVDPDG-----EPDGDAVEKILDKCLEK-GLLFYLCGN--AGNVLRMIPPLTVTKEEI 416 (433)
T ss_pred HHHhcCCceeeeecCCcEEEEEEecCCC-----CcchHHHHHHHHHHHHC-CCEEeecCC--CCCEEEEeCCccCCHHHH
Confidence 320 2222223445556666642100 00001245667777765 998876321 246899995 4599999
Q ss_pred HHHHHHHHHHHHhhC
Q 012095 452 QAAVERIKKGLLTLR 466 (471)
Q Consensus 452 ~~~~~~l~~~l~~~~ 466 (471)
++++++|.++++++.
T Consensus 417 ~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 417 DEGLDILDEALTEYE 431 (433)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 240
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-20 Score=181.25 Aligned_cols=342 Identities=18% Similarity=0.227 Sum_probs=235.4
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.+|+.+|||..|. +.++. +|.+++++.++.++-++ .+..-..+.+.++++.+.+..+ ..+.++++|+++||+
T Consensus 39 ~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h--~sn~~~~~~~~~la~~L~~~s~---~~d~vff~NSGaEA~ 113 (404)
T COG4992 39 QQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH--VSNLFYNEPQAELAEKLVELSP---FADRVFFCNSGAEAN 113 (404)
T ss_pred CCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh--cccccCChHHHHHHHHHHhhCc---cccEEEEcCCcHHHH
Confidence 4789999998887 56665 79999999998765221 1111224566667777765433 368999999999999
Q ss_pred HHHHHHhc---C-CC-CeEEEcCCCCCChHHHHHHcCCEEEEe----cCCCC---CCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 169 LQAVLAVC---S-PG-DEVIIPAPFWVSYPEMARIADATPVIL----PTRIS---ENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 169 ~~~~~~l~---~-~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v----~~~~~---~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
+.+++... . |+ .+|+....+|++-...+-..+.+..+. |+.+. -.|+ |++++++++++++.+|++..
T Consensus 114 EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~taAvivEP 192 (404)
T COG4992 114 EAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDTAAVIVEP 192 (404)
T ss_pred HHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCeEEEEEec
Confidence 99888752 2 22 478888888876443333333322111 22111 0122 99999999999999998877
Q ss_pred CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE
Q 012095 237 PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
-+--.|+ ..+++.++++.++|++| |+++|.||++.++-..|.- ..+.... -.--+-++.|.+| .|+.+|.++
T Consensus 193 IQGEgGV~~~~~~fl~~lr~lCd~~-g~LLI~DEVQtG~GRTGk~-fA~e~~g----V~PDI~tlaK~Lg-GG~PigA~l 265 (404)
T COG4992 193 IQGEGGVIPAPPEFLKALRELCDEH-GALLILDEVQTGLGRTGKL-FAYEHYG----VEPDILTLAKALG-GGFPIGAML 265 (404)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHh-CeEEEEeccccCCCccchH-HHHHHhC----CCCCEEEeecccc-CCccceeeE
Confidence 7877885 55777899999999999 9999999999987544421 1111111 1112555789999 999999999
Q ss_pred cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeCCCcceE
Q 012095 316 GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMSEPQGAFY 391 (471)
Q Consensus 316 ~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~~~~p~~g~~ 391 (471)
+.+.+.+.+..-....+++.|+++.+++.++|+.-. -+.+.+..+++-+++.+.|.++ +-++-+. .-|+.
T Consensus 266 a~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~-----~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vR-G~GLm 339 (404)
T COG4992 266 ATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLL-----EEGLLENVREKGEYLLQRLRELKRRYPLVKEVR-GRGLM 339 (404)
T ss_pred EchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHc-----chhHHHHHHHHHHHHHHHHHHHhhcCCceeeee-cceeE
Confidence 996667766655566788999999999999987521 2334444555555566666553 2122122 33666
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
+-+.+.... ...++++.|.++ ||++.+.. ++.+|+.... +++++++++++|++++......
T Consensus 340 iGiel~~~~-----------~a~~~~~~~~~~-gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~~ 402 (404)
T COG4992 340 IGIELKEPY-----------RARDIVRALREE-GVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAASAR 402 (404)
T ss_pred EEEEecCcc-----------cHHHHHHHHHHC-CeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhhc
Confidence 667765421 367889988876 89988854 5689999886 9999999999999999876543
No 241
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=2.3e-20 Score=188.17 Aligned_cols=217 Identities=14% Similarity=0.192 Sum_probs=163.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~ 208 (471)
-..+|.+.++++. | .+..+.++++++|+.+++.+++++||+|+++.++|.+.... +...|+++.++..
T Consensus 62 tv~~lE~~la~le----g----~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELE----G----GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 3566777777764 3 34678899999999999999999999999999999876665 6778999998864
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
.+|++.++++++++||+|++.+|+||++.+.+ +++|+++|++| ++++|+|++|.. +.+.. +
T Consensus 134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~-gi~livD~T~~t--------P~~~~-p 194 (432)
T PRK06702 134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKEL-EVPFIVDNTLAT--------PYLCQ-A 194 (432)
T ss_pred ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHc-CCEEEEECCCCc--------hhhCC-h
Confidence 26999999999999999999999999999999 99999999999 999999999852 11111 1
Q ss_pred CCCCceEEEecCCc-----ccCccchhh-----eeeEcC-HHHH---------------------H-HHHHHHhcccCCC
Q 012095 289 GMWERTLTVNGFSK-----AFAMTGWRL-----GYIAGP-KHFV---------------------A-ACNKIQSQFTSGA 335 (471)
Q Consensus 289 ~~~~~~i~~~S~SK-----~~g~~G~R~-----G~v~~~-~~~i---------------------~-~l~~~~~~~~~~~ 335 (471)
-..+-.|++.|+|| ..+++|.++ +|..++ .+++ . ........++.++
T Consensus 195 l~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (432)
T PRK06702 195 FEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCM 274 (432)
T ss_pred hhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCC
Confidence 11344599999999 777888887 665543 1111 1 1112333456678
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
+++....+...|+. +..+.++..++...+.+.|++.|++.+
T Consensus 275 sp~~a~l~~rgL~T-------l~lR~~r~~~Na~~la~~L~~~p~V~~ 315 (432)
T PRK06702 275 SPFNAYISNIGLET-------LHLRMERHSENALAVAKWLADHERIEW 315 (432)
T ss_pred CHHHHHHHHhccCc-------HHHHHHHHHHHHHHHHHHHHhCCCcce
Confidence 88887766666653 445555556888888888888776543
No 242
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=2.3e-20 Score=186.96 Aligned_cols=216 Identities=12% Similarity=0.147 Sum_probs=155.7
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v 206 (471)
++...+|++.++++. | ....+++++| +.++..++ .+++|||+|++++|.|.+... .+...|++++.+
T Consensus 49 ~p~~~~Le~~lA~l~----g---~~~~~~~~sG-~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v 119 (377)
T PRK07671 49 NPTRAALEELIAVLE----G---GHAGFAFGSG-MAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV 119 (377)
T ss_pred ChHHHHHHHHHHHHh----C---CCceEEeCCH-HHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE
Confidence 334567777777765 4 2345665555 56777654 578999999999999984432 334579999888
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
+. .|++++++++++++++|++++|+||||.+.+ +++|.++|+++ ++++|+|++|....+.. ++ .
T Consensus 120 ~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~-g~~lvvD~a~~~~~~~~----p~-~ 183 (377)
T PRK07671 120 DT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEK-GLLTIVDNTFMTPYWQS----PI-S 183 (377)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCCccccCC----hh-h
Confidence 64 3899999999999999999999999999988 88999999999 99999999997532211 11 1
Q ss_pred CCCCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
.+..+++.|+||.++-++ .-.|++++ ++++++++...+.......+++....+... .+.+...+++.
T Consensus 184 ----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~-------l~tl~~R~~~~ 252 (377)
T PRK07671 184 ----LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRG-------LKTLGIRMEEH 252 (377)
T ss_pred ----hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcC-------cChHHHHHHHH
Confidence 234599999999996332 23466665 667888888877766555666554433322 23355567777
Q ss_pred HHHHHHHHHHhcCCCCCe
Q 012095 365 RERRDFLVKSFGELEGVK 382 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~ 382 (471)
.++...+.+.|++.|++.
T Consensus 253 ~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 253 ETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHcCCCee
Confidence 788888999998877653
No 243
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.88 E-value=3.9e-20 Score=187.58 Aligned_cols=346 Identities=12% Similarity=0.082 Sum_probs=217.5
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCcEEE-eCChHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSY-TPDQILV-SNGAKQ 166 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~-~~~~i~i-t~G~~~ 166 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+....+ ......+.+..+++.+.+....+- ..+.+++ ++++++
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhcccee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 36888999988863 3444 7899999999887522111 111234566667777654321110 1124655 589999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCCCC-cCCHHHHHhhhc----
Q 012095 167 SILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISENF-LLDPKVLESKLT---- 226 (471)
Q Consensus 167 al~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~-~ld~e~l~~~l~---- 226 (471)
+...+++.... +| ..|+....+|++....+... |. .++.+|....... .-+++.+++.+.
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 99988886532 33 67888888898876543322 21 2233332110000 014677887775
Q ss_pred --cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCc
Q 012095 227 --EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 --~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK 302 (471)
+++.+|++...++++|. +.+++.+++|.++|++| ++++|+||++..+-..|... .....+.+ | +.+|||
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GRtG~~~a~~~~~v~P--D----i~~~~K 263 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH-DILLIVDDIQAGCGRTGTFFSFEPAGIEP--D----IVCLSK 263 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchhHHhcccCCCC--C----EEEech
Confidence 23456666555888897 68999999999999999 99999999998653222211 11122222 2 446899
Q ss_pred ccCcc-chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-cCC--ChHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 303 AFAMT-GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYA--GGEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 303 ~~g~~-G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-~~~--~~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
.++ + |+|+||+++++++ +.+.......+++.++++..++.+.|+. -.. ..+.+.++.+.++++.+.+.+. +
T Consensus 264 ~lg-~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~---~ 338 (412)
T TIGR02407 264 SIS-GYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAE---Y 338 (412)
T ss_pred hcc-CCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhh---C
Confidence 998 7 9999999998886 5443333445667788877776776662 111 1223334444444444433333 3
Q ss_pred CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHH
Q 012095 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 379 ~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~ 456 (471)
+++.+.....|+++|+.+++. .....+...++++ ||.+.+...+ .+.+|++... ++++++++++
T Consensus 339 ~~~~~~vrg~Gl~~~l~l~~~-----------~~~~~~~~~~~~~-Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~ 404 (412)
T TIGR02407 339 PELIKQVRGRGLMQGIECGDG-----------DLAGKIAKAAFEN-GLIIETSGPN--DEVIKLLPPLTIDEETLQQGLD 404 (412)
T ss_pred CCceEeeecceeEEEEEecCh-----------HHHHHHHHHHHHC-CCEEeccCCC--CCEEEEECCCCCCHHHHHHHHH
Confidence 333344456688899999753 1356788888765 9999875322 3679998875 9999999999
Q ss_pred HHHHHHHh
Q 012095 457 RIKKGLLT 464 (471)
Q Consensus 457 ~l~~~l~~ 464 (471)
+|.+++++
T Consensus 405 ~l~~~l~~ 412 (412)
T TIGR02407 405 ILEQAVEE 412 (412)
T ss_pred HHHHHHhC
Confidence 99998864
No 244
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=4.9e-20 Score=187.35 Aligned_cols=325 Identities=15% Similarity=0.107 Sum_probs=214.6
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcC---C--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREG---F--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~---~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
+.++.|..|.-. +.|+.+.+++.+.+... . ..|....+...+.+.+.+ + +..| .++++|++|+|+++++.
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g--~~~~~v~~~~~~t~~l~ 100 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVG--AKEDEVVVMNTLTINLH 100 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccC--CCCCcEEEeCCchHHHH
Confidence 457999977755 34788888887665431 1 111101122233333333 2 4456 47889999999999999
Q ss_pred HHHHHhcCCC---CeEEEcCCCCCChHH----HHHHcCCEE----EEecCCCCCCCcCCHHHHHhhh---ccCCcEEEEc
Q 012095 170 QAVLAVCSPG---DEVIIPAPFWVSYPE----MARIADATP----VILPTRISENFLLDPKVLESKL---TEKSRLLILC 235 (471)
Q Consensus 170 ~~~~~l~~~g---d~Vlv~~p~y~~~~~----~~~~~G~~~----~~v~~~~~~~~~ld~e~l~~~l---~~~~~~i~i~ 235 (471)
.++..++++| +.|++.+..|++... .++..|+++ +.++.+ .++.+|++.+++.+ ++++++|+++
T Consensus 101 ~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~--~~g~~~~~~l~~~~~~~~~~t~lv~~~ 178 (406)
T TIGR01814 101 LLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPR--EEETLRLEDILDTIEKNGDDIAVILLS 178 (406)
T ss_pred HHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccC--CCCccCHHHHHHHHHhcCCCeEEEEEe
Confidence 9999887665 368888899988433 345678887 455543 34557999998877 3688999999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheee
Q 012095 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYI 314 (471)
Q Consensus 236 ~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v 314 (471)
+++|.||..++ +++|.++|+++ |+++++|++++. |.....+. ..+..+++.|..|.++ -+| |.+
T Consensus 179 ~v~~~tG~~~~---~~~i~~~~~~~-g~~~~vD~aq~~----G~~~id~~----~~gvD~~~~s~hK~l~g~pG---~~l 243 (406)
T TIGR01814 179 GVQYYTGQLFD---MAAITRAAHAK-GALVGFDLAHAV----GNVPLDLH----DWGVDFACWCTYKYLNAGPG---AGA 243 (406)
T ss_pred ccccccceecC---HHHHHHHHHHc-CCEEEEEccccc----CCcccccc----cCCCCEEEEcCccccCCCCC---eEE
Confidence 99999999999 99999999999 999999999986 22222221 1345689999999873 244 444
Q ss_pred EcCHHHHHHHHHH-Hh----------------------cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 315 AGPKHFVAACNKI-QS----------------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 315 ~~~~~~i~~l~~~-~~----------------------~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
+..++....+... .. ....+++.....++.++|+.- .+..++...++.++..+++
T Consensus 244 ~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~--~~~g~~~i~~~~~~l~~~l 321 (406)
T TIGR01814 244 FVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIF--DQAGMEALRKKSLLLTDYL 321 (406)
T ss_pred EEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHH
Confidence 4333322222110 00 001235555666666666641 0223567778888888888
Q ss_pred HHHhcCC----CCCeeeCCC-----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012095 372 VKSFGEL----EGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 442 (471)
Q Consensus 372 ~~~L~~~----~g~~~~~p~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi 442 (471)
.+.|.++ +|+++..|. +++ +.+.++ . +..++.+.|.++ ||.+.. ..++.||+
T Consensus 322 ~~~l~~~~~~~~~~~i~~~~~~~~r~~~-v~~~~~-~------------~~~~~~~~L~~~-gi~v~~----~~~~~iRi 382 (406)
T TIGR01814 322 EELIKARCGGPPVLTIITPRDHAQRGCQ-LSLTHP-V------------PGKAVFQALIKR-GVIGDK----REPSVIRV 382 (406)
T ss_pred HHHHHhhcCCCCceEEeCCCChhhcCCe-EEEEec-C------------CHHHHHHHHHHC-CEEEec----cCCCeEEE
Confidence 8888764 357766542 234 455565 2 567888888765 998753 23468999
Q ss_pred Eee--c-CHHHHHHHHHHHHHHH
Q 012095 443 SYA--A-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 443 s~~--~-~~e~i~~~~~~l~~~l 462 (471)
|++ . ++++++++++.|++++
T Consensus 383 S~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 383 APVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred echhccCCHHHHHHHHHHHHHHh
Confidence 984 3 8899999999998764
No 245
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=4.7e-19 Score=180.46 Aligned_cols=322 Identities=16% Similarity=0.183 Sum_probs=207.8
Q ss_pred eEEcCCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 97 VIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 97 ~i~l~~g~~~~~~-----p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
...|+.|.|+++. +..-.+++.+.+..+...+++ ...+|+++++++++ .+++++++|+++++..+
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~--~~~~fe~~lA~~~g--------~~~~v~~~sGt~al~~a 94 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGR--FNDAFEKKLAEFLG--------VRYALLVNSGSSANLLA 94 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCCh--hHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHH
Confidence 3447899887654 233344455555544444433 35788999998863 34799999999999988
Q ss_pred HHHh---------cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcc
Q 012095 172 VLAV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (471)
Q Consensus 172 ~~~l---------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG 242 (471)
+.++ ++|||+|+++.|+|..+...+...|++++.++++. ..|.+|++.+++++++++++|+++++ +|
T Consensus 95 L~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~G 170 (438)
T PRK15407 95 FSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---LG 170 (438)
T ss_pred HHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---CC
Confidence 8876 47899999999999999999999999999999875 45789999999999999999998764 56
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcCH-
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGPK- 318 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~~- 318 (471)
...+ +++|.++|++| +++||+|++|.... +.+.. ...+. .+.+.||. |.+. +|- -|+++.++
T Consensus 171 ~p~d---l~~I~~la~~~-gi~vIeDaa~a~G~~~~g~~---~G~~g-----d~~~fSf~~~k~~~-~ge-GG~l~t~d~ 236 (438)
T PRK15407 171 NPFD---LAAVKAFCDKH-NLWLIEDNCDALGSTYDGRM---TGTFG-----DIATLSFYPAHHIT-MGE-GGAVFTNDP 236 (438)
T ss_pred Chhh---HHHHHHHHHHC-CCEEEEECccchhhhcCCee---eeccC-----ceEEEeCCCCCCcc-ccC-ceEEEECCH
Confidence 5555 89999999999 99999999998643 33321 11221 25566774 6664 343 59988764
Q ss_pred HHHHHHHHHHhcc---------------------------------------cCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 319 HFVAACNKIQSQF---------------------------------------TSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 319 ~~i~~l~~~~~~~---------------------------------------~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
++.+.++.++... ++.++.+..+++..-| +.+++
T Consensus 237 ~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL-------~~l~~ 309 (438)
T PRK15407 237 LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQL-------EKLPG 309 (438)
T ss_pred HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHH-------HHHHH
Confidence 4555554433211 1112222222222222 33556
Q ss_pred HHHHHHHHHHHHHHHhcCCCC-Ceee-CCCc---ceEE-eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 360 MVKAFRERRDFLVKSFGELEG-VKMS-EPQG---AFYL-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g-~~~~-~p~~---g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
..++-+++.+++.+.|.++++ +.+. .+.+ ++|. .+.+++..+ .+-.++.+.|.++ ||.+.+...
T Consensus 310 ~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~Rd~l~~~L~~~-GI~~~~~~~ 379 (438)
T PRK15407 310 FIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDAG---------FTRVELVKYLEEN-KIGTRLLFA 379 (438)
T ss_pred HHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcCC---------CCHHHHHHHHHHC-CCCccccCC
Confidence 666666777777888887765 3222 1222 2332 344432110 1467888888765 886653221
Q ss_pred --------CC------C---C-------CcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 434 --------FG------D---D-------TCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 434 --------f~------~---~-------~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
|. . + ..+-+-+.. ++++++..++.|+++++
T Consensus 380 ~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 380 GNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 00 0 0 123333332 78999999999998874
No 246
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.5e-20 Score=169.46 Aligned_cols=333 Identities=17% Similarity=0.184 Sum_probs=230.8
Q ss_pred CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.+++++|+.|+ ..+..+|+++++..+++++- ...-.-..|+....+.+...+.+.++ ..|.|+. +..-.+..
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~---rED~ily-pscfdANa 141 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG---REDTILY-PSCFDANA 141 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC---CCceEEe-ccccccch
Confidence 35789999888 67777899999999998761 12121236888888888888888777 4445544 44455566
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCcccCC
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~~~ 245 (471)
.++.+++.|.|.|+-++-.+.+..+.++++. + + ..+|+-.++..+.+ +-|+|+......+.|.+.
T Consensus 142 g~feail~pedAvfSDeLNhASIIdGirLck-r---y-------~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdia 210 (417)
T KOG1359|consen 142 GAFEAILTPEDAVFSDELNHASIIDGIRLCK-R---Y-------RHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIA 210 (417)
T ss_pred HHHHHhcChhhhhhccccccchhhhhhHHHh-h---h-------ccchhHHHHHHHHHhhhheEEEEEecceeccCCCcc
Confidence 6788889999999999999999998888876 1 1 11566667665543 455666677789999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAAC 324 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l 324 (471)
| +++|.+++++| +.++++||+|.-+.++..+......+..+.+..|..++++|++| ..| ||..+|+++++.+
T Consensus 211 P---l~ei~~La~kY-gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gyttgp~~li~ll 283 (417)
T KOG1359|consen 211 P---LEEISQLAKKY-GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTTGPKPLISLL 283 (417)
T ss_pred c---HHHHHHHHHhc-CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCccCChhHHHHH
Confidence 9 99999999999 99999999999887765544444444445677799999999986 555 9999999999999
Q ss_pred HHHHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCC
Q 012095 325 NKIQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS 402 (471)
Q Consensus 325 ~~~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~ 402 (471)
+...+++.++. ++...-.+.++++. .-.-.......+.+.+++.+.++.. |+.+......+ +.+.+.+.
T Consensus 284 rqr~RpylFSnslppavV~~a~ka~dl----lm~s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI-~pv~lGda--- 354 (417)
T KOG1359|consen 284 RQRSRPYLFSNSLPPAVVGMAAKAYDL----LMVSSKEIQSRQANTQRFREFMEAA-GFTISGASHPI-CPVMLGDA--- 354 (417)
T ss_pred HhcCCceeecCCCChhhhhhhHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCc-cceecccH---
Confidence 87766654432 22222223333332 1111233334444555555555444 88776433222 33334322
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
..+..++++|++. ||+|..-++.-.+ ..+|+.+++ ++|+|++.++++.++.+-+.
T Consensus 355 --------~lA~~~ad~lLk~-Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 355 --------RLASKMADELLKR-GIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred --------HHHHHHHHHHHhc-CceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 2467889999987 9999876655433 368887775 99999999999998876543
No 247
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.87 E-value=1.2e-19 Score=184.88 Aligned_cols=349 Identities=12% Similarity=0.096 Sum_probs=213.8
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEE-eCChHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILV-SNGAKQ 166 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~i-t~G~~~ 166 (471)
..|+.+||+..|.. .++. +|.+.+++.+++.+....+ ......+.+..+++.+.+....+-.. +.+++ ++++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITH-GLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred CCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccc-ccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 36888999988863 3444 7899999999887521111 11112355666666665432111111 25655 589999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-C------------CEEEEecCCCCCCC-cCCHHHHHhhhcc---
Q 012095 167 SILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-D------------ATPVILPTRISENF-LLDPKVLESKLTE--- 227 (471)
Q Consensus 167 al~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G------------~~~~~v~~~~~~~~-~ld~e~l~~~l~~--- 227 (471)
+...+++.... +| ..|+....+|++....+... | ..+..+|....... .-|++.+++.+.+
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 99988886531 33 67888888888876433222 1 02334443210000 0267788887742
Q ss_pred ---CCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 228 ---KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
+..+|++...+...|. +.+++.+++|.++|++| |+++|+||++.++...|.. ..+....-..| +.+|||.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~-~~~~~~~v~PD----i~t~~K~ 268 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH-DILLIVDDIQAGCGRTGTF-FSFERAGITPD----IVTLSKS 268 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEechhhCCccccHH-HHHhhcCCCCC----EEEeccc
Confidence 2345555444555675 67899999999999999 9999999999875333321 11111111112 4477999
Q ss_pred cCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CC
Q 012095 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE 379 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~ 379 (471)
++..|+++|++++++++ ..+.......+++.++++..++.++|..-.. + .++.+..+++.+++.+.|++ .+
T Consensus 269 l~~~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~-~---~~l~~~~~~~g~~l~~~l~~l~~~~~ 343 (425)
T PRK09264 269 ISGYGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS-D---DAFEKEVKAKGELVRERLEEIAAKYP 343 (425)
T ss_pred cCCCccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh-h---hHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 98449999999999886 3443322334566788888777777742110 1 12333444444444444433 33
Q ss_pred CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHH
Q 012095 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVER 457 (471)
Q Consensus 380 g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~ 457 (471)
.+.......|+++++.+++. .....+++.++++ ||.+.++..+ ...||++.. .+++++++++++
T Consensus 344 ~~~~~vrg~Gl~~~i~l~~~-----------~~~~~l~~~~~~~-Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~~~ 409 (425)
T PRK09264 344 GLGAEVRGRGMMQGIDFGDG-----------ELAGKIAAEAFEN-GLIIETSGPE--DEVVKLLPPLTIDEEELEEGLDI 409 (425)
T ss_pred CceecceecccEEEEEecCh-----------HHHHHHHHHHHHC-CCEEeccCCC--CCEEEEeCCCCCCHHHHHHHHHH
Confidence 23222234577788888642 1356788888776 9999885433 367888866 489999999999
Q ss_pred HHHHHHhhC
Q 012095 458 IKKGLLTLR 466 (471)
Q Consensus 458 l~~~l~~~~ 466 (471)
|.++++++.
T Consensus 410 l~~~l~~~~ 418 (425)
T PRK09264 410 LEEAVAEVL 418 (425)
T ss_pred HHHHHHHHH
Confidence 999987754
No 248
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.87 E-value=3.2e-19 Score=177.13 Aligned_cols=353 Identities=15% Similarity=0.174 Sum_probs=237.7
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-----hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-----PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 159 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-----p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~ 159 (471)
++.+.+++.|.+...|...+-.... -.++.++....+..+...|..++...+|.+++++++ ..+.++
T Consensus 19 ~r~~~l~~ag~n~f~l~~~~v~iDLltDsgT~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~--------G~~~av 90 (450)
T TIGR02618 19 EREKKMQEAGYNTFLLNSEDVYIDLLTDSGTNAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELY--------GFKYVV 90 (450)
T ss_pred HHHHHHHHcCCCcccCccCceEEEcccCCCcHHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHH--------CCCeEE
Confidence 4455666788877777777732221 145555534444445567988888999999999997 345899
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHHHHcCCEEEEecCCC--------CCCCcCCHHHHHhhhcc---
Q 012095 160 VSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRI--------SENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 160 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~--------~~~~~ld~e~l~~~l~~--- 227 (471)
.+++++.++.++....++|||+| +.++| .++...+...|+.++.++.++ ...+.+|++.+++++++
T Consensus 91 ~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~ 168 (450)
T TIGR02618 91 PTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA 168 (450)
T ss_pred EcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence 99999999998877778999987 66777 444445788999777775431 23467999999999975
Q ss_pred -CCcEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc--cc-----CCCCccccc----cCCCCCCce
Q 012095 228 -KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI--IY-----APATHTSFA----SLPGMWERT 294 (471)
Q Consensus 228 -~~~~i~i~~p~N-PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~--~~-----~~~~~~~~~----~~~~~~~~~ 294 (471)
++++|.+.+++| .+|.++|.+++++|.++|++| |+.||+|.+.... .+ .+....++. .+.. .-.
T Consensus 169 ~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~-Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~--~aD 245 (450)
T TIGR02618 169 DKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH-GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMS--YAD 245 (450)
T ss_pred cccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc-CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhc--cCc
Confidence 344677888887 558999999999999999999 9999999987641 11 111122331 1111 112
Q ss_pred EEEecCCcccCcc-chhheeeE-cCHHHHHHHHHHHhcccC-----CCChHHHHHHHHHHhccCCChHHHHHH-HHHHHH
Q 012095 295 LTVNGFSKAFAMT-GWRLGYIA-GPKHFVAACNKIQSQFTS-----GASSISQKAGVAALGLGYAGGEVVSKM-VKAFRE 366 (471)
Q Consensus 295 i~~~S~SK~~g~~-G~R~G~v~-~~~~~i~~l~~~~~~~~~-----~~~~~~q~aa~~~L~~~~~~~~~~~~~-~~~~~~ 366 (471)
.++.|..|..+.+ | |+++ .++++++++++....+.. +...-...++...|.+ +++.. .++-..
T Consensus 246 ~~~~S~~Kd~~~~~G---G~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e------~~~~~y~~~r~~ 316 (450)
T TIGR02618 246 GCTMSGKKDCLVNIG---GFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIRE------AVDYEYIEHRVK 316 (450)
T ss_pred EEEEeeccCCCCCCc---eEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHH------hhhHHHHHHHHH
Confidence 4788888988766 5 7777 688899998877443311 1122222233333432 22222 222233
Q ss_pred HHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCCHHHHHHHHHHcCCEEEE-CCCCC-CC-------
Q 012095 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAF-GD------- 436 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~-pg~~f-~~------- 436 (471)
+.++|.+.|.+. |+.+..|.+|.-++++..... +.....+ ....++-.|..+.||--. -|+.. +.
T Consensus 317 ~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~~~----p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~ 391 (450)
T TIGR02618 317 QVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQDQF----PAQSLAASIYVETGVRSMERGIVSAGRNNVTGEH 391 (450)
T ss_pred HHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChhhC----hHHHHHHHHHHHhCccEEeecceecccCCCCCcc
Confidence 567788888888 998888888888888865431 1111222 678888888888898543 34321 11
Q ss_pred ----CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012095 437 ----DTCIRISYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 437 ----~~~iRis~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
-..+|+++.. |.+.++...++|..+.++
T Consensus 392 ~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 392 HRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred cCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1479999987 889999999999888764
No 249
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=2.1e-19 Score=182.48 Aligned_cols=336 Identities=16% Similarity=0.086 Sum_probs=207.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHH-HcCCCCCCC---CCCCHHHHHHHHH----HHHHHhCCCCCCCcEEEeCChHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAI-REGFTRYTP---NAGTLELRSAICH----KLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~-~~~~~~Y~~---~~G~~~lr~~ia~----~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
++.|+|-..++.. +|.+++++..++ .....+|+. ..|. +..+.+.+ .+++.+|. ..-++.+++++.
T Consensus 28 ~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~-~~~~~lE~~~~~~la~l~g~---~~alv~~~SG~~ 101 (416)
T PRK13034 28 QDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EFVDEVEALAIERAKQLFGC---DYANVQPHSGSQ 101 (416)
T ss_pred hcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCC-hHHHHHHHHHHHHHHHHhCC---CceEEecCCcHH
Confidence 4578888777764 778888888775 321111111 1232 33444444 66666663 233345678888
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCC-hHHHHHH--cCCEE--EEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCC
Q 012095 167 SILQAVLAVCSPGDEVIIPAPFWVS-YPEMARI--ADATP--VILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNP 240 (471)
Q Consensus 167 al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~--~G~~~--~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NP 240 (471)
++..++.++++|||+|+++..+|.+ +...++. .+... +.++++.. ++.+|++++++.+. .++|+|++.++.
T Consensus 102 A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi~~~~~-- 178 (416)
T PRK13034 102 ANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLIIAGFSA-- 178 (416)
T ss_pred HHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEEECCCc--
Confidence 9999999999999999999998876 2322222 12222 34544432 45689999999884 368888776654
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
+|...+ +.+|.++|++| ++++|+|+++....+.... ....+ .+..+++.|++|.++ |-..|+++++++.
T Consensus 179 ~g~~~d---l~~l~~la~~~-g~~livD~Aha~G~~~~g~--~~~~~---~~~Di~~~s~~K~l~--g~~GG~v~~~~~~ 247 (416)
T PRK13034 179 YPRELD---FARFREIADEV-GALLMVDMAHIAGLVAAGE--HPNPF---PHAHVVTTTTHKTLR--GPRGGMILTNDEE 247 (416)
T ss_pred cccccC---HHHHHHHHHHc-CCEEEEeCcccccCcccCC--CCCCC---CCceEEEEeCcccCC--CCCCeEEEECcHH
Confidence 467777 88889999999 9999999999875543211 11111 234589999999993 2223888776554
Q ss_pred -HHHHHHHHhcc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-CcceEEeEecC
Q 012095 321 -VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFS 397 (471)
Q Consensus 321 -i~~l~~~~~~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~~g~~~~~~~~ 397 (471)
.+.++...... ..++.+....++..++... ......+.++++.++.+++.+.|.+. |+.+..+ .....+++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~ 324 (416)
T PRK13034 248 IAKKINSAVFPGLQGGPLMHVIAAKAVAFGEA--LQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLR 324 (416)
T ss_pred HHHHHHhhcCCcccCCccHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcC
Confidence 44444432211 1223333333333233221 01223456788889999999999888 8887642 22333566665
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC------CCCCCCCcEEEEeec------CHHHHHHHHHHHHHHHHh
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG------DAFGDDTCIRISYAA------SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg------~~f~~~~~iRis~~~------~~e~i~~~~~~l~~~l~~ 464 (471)
.. + .+...+.+.| ++.||.+.+- .....+..+|++... ++++++++++.|.+++.+
T Consensus 325 ~~-~---------~~~~~~~~~L-~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 325 PK-G---------LSGKDAEQAL-ERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CC-C---------CCHHHHHHHH-HhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 32 0 1344555655 4559998752 112234679998654 579999999999988874
No 250
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=5.5e-21 Score=185.67 Aligned_cols=225 Identities=19% Similarity=0.235 Sum_probs=154.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 209 (471)
|..-+.++++.+++++ | ..+.+++++|+++++..++.++++|||.|+++.++|.+....+...|++++.++.+
T Consensus 57 ~~g~i~~~~~~~A~~~----g---a~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 57 PTGPIKEAQELAARAF----G---AKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred CChHHHHHHHHHHHHh----C---CCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 4434567777777775 3 23455569999999999999999999999999999999999999999999999876
Q ss_pred CCCC----CcCCHHHHHhhhc--cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCcc
Q 012095 210 ISEN----FLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHT 282 (471)
Q Consensus 210 ~~~~----~~ld~e~l~~~l~--~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~ 282 (471)
.+.+ ..+|+++++++++ ++++++++++| ||||.+++ +++|+++|+++ +++||+||+|.. +.|.+....
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~-g~~livDeA~~~~~~~~~~~~~ 204 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHR-GLPVLVDEAHGAHFRFHPILPS 204 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhc-CCeEEEECcchhhhccCcccCc
Confidence 5443 3689999999986 36889999998 78999999 89999999999 999999999974 334332111
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeE-cCHHH--HHHHHHHHh-cccCCCChHHHHHHHHHHhccCCChHHHH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHF--VAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~~--i~~l~~~~~-~~~~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
... ..+..+++.|++|++ +|++.|+++ .+.+. .+++..... ..+.+++.+...++..++.. ....-.
T Consensus 205 ~~~----~~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~---~~~~g~ 275 (294)
T cd00615 205 SAA----MAGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAM---MALEGK 275 (294)
T ss_pred chh----hcCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH---HHHHhH
Confidence 111 236779999999985 788876544 44331 233333222 22334444444444444432 011122
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012095 359 KMVKAFRERRDFLVKSF 375 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L 375 (471)
+..++..++.+.+++.|
T Consensus 276 ~~~~~~~~~~~~~r~~l 292 (294)
T cd00615 276 ELVEELIELALYARQEI 292 (294)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444555555544
No 251
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.87 E-value=1.9e-19 Score=180.39 Aligned_cols=213 Identities=14% Similarity=0.162 Sum_probs=148.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~ 208 (471)
-...|++.++++. | ....+++++| +.++..++ .+++|||+|++++|.|.+.. ..+...|++++.++.
T Consensus 51 ~~~~Le~~la~l~----g---~~~al~~~SG-~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 51 TRFALEELIADLE----G---GVKGFAFASG-LAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred hHHHHHHHHHHHh----C---CCCEEEECCH-HHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 3566777777764 3 2234555555 56887655 57799999999999997654 345667888888864
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
.|++++++++++++++|++++|+||||.+.+ +++|+++|++| +++||+|++|....+. .++ .
T Consensus 122 -------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~-gi~vivD~t~a~~~~~----~p~-~-- 183 (380)
T PRK06176 122 -------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDH-GLLTIVDNTFATPYYQ----NPL-L-- 183 (380)
T ss_pred -------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHc-CCEEEEECCccccccC----Ccc-c--
Confidence 3899999999999999999999999999999 88999999999 9999999999864321 111 1
Q ss_pred CCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
.+..+++.|++|.++-+| .-.|++++ ++++.+++...+.....+.++...+.+...+. .+....++..+
T Consensus 184 --~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~-------tl~~R~~~~~~ 254 (380)
T PRK06176 184 --LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIK-------TLGLRMEAHQK 254 (380)
T ss_pred --cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccC-------cHHHHHHHHHH
Confidence 234499999999996444 34577777 45677777766665454455554333322221 23334444445
Q ss_pred HHHHHHHHhcCCCCC
Q 012095 367 RRDFLVKSFGELEGV 381 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~ 381 (471)
+...+.+.|++.|.+
T Consensus 255 ~a~~la~~L~~~p~v 269 (380)
T PRK06176 255 NALCVAEFLEKHPKV 269 (380)
T ss_pred HHHHHHHHHHhCCCe
Confidence 566666777766554
No 252
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=3e-19 Score=182.23 Aligned_cols=346 Identities=16% Similarity=0.086 Sum_probs=216.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|. ..++. +|.+.+++.+++.+..... ...-..+.+..+++.+.+..+. ..+.++++++++++..
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e 116 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVI-FAGFTHEPAERLAQRLVALTPG--GLDHVFFSDSGSVAVE 116 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 688899998885 34444 6899999999887632111 1011235566777777655431 2368999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
.+++.... +| ..|+..+.+|++....+..... .+..++....+....+++.+++.+.+
T Consensus 117 ~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~ 196 (423)
T PRK05964 117 VALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH 196 (423)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC
Confidence 98886521 34 5788888888876543322111 12223322111001127888888742
Q ss_pred --CCcEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 228 --KSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 228 --~~~~i~i~~-p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
+..+|++.. .++.+|... +.+.+++|.++|++| |+++|+||++.++...|.. ... .. .+...-+.++||.
T Consensus 197 ~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tg~gr~G~~-~a~-~~---~~v~pDi~~~~K~ 270 (423)
T PRK05964 197 AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH-GVLLIFDEIATGFGRTGTL-FAC-EQ---AGVSPDIMCLSKG 270 (423)
T ss_pred CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcch-hHH-Hh---cCCCCCeeeeehh
Confidence 344555543 366778655 899999999999999 9999999999876443321 111 11 1111224578999
Q ss_pred cCccc-hhheeeEcCHHHHHHHHHH------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 304 FAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 304 ~g~~G-~R~G~v~~~~~~i~~l~~~------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
++ .| +++|++++++++++.+... ....+++.++++..++.++|+.-. .++++++..+.-+..++.+.+ +.
T Consensus 271 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~-~~~~~~~~~~~g~~l~~~l~~-l~ 347 (423)
T PRK05964 271 LT-GGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFE-DEPVLERVAALSAGLAEGLEP-FR 347 (423)
T ss_pred hh-cCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHh-hc
Confidence 97 55 8999999999999887531 122345678899888888887311 123444444443334433332 22
Q ss_pred CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHH
Q 012095 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAA 454 (471)
Q Consensus 377 ~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~ 454 (471)
+.+.+.-....| ..+.+.+.+... ......+.+.|+++ ||.+.+.. +.+|++.. .++++|+++
T Consensus 348 ~~~~i~~vrg~G-l~~~i~l~~~~~--------~~~~~~l~~~l~~~-Gv~v~~~~-----~~lR~~p~l~~t~edId~~ 412 (423)
T PRK05964 348 DLPGVADVRVLG-AIGAVELDRPVL--------ERDGPALRAFALER-GVLLRPLG-----NTIYLMPPYIITAEELDRI 412 (423)
T ss_pred cCCCeEEeeccc-EEEEEEeccCcc--------hhHHHHHHHHHHHC-CeEEEecC-----CEEEEeCCcccCHHHHHHH
Confidence 334332223334 445555643200 00255788888765 99998742 47999977 499999999
Q ss_pred HHHHHHHHHhh
Q 012095 455 VERIKKGLLTL 465 (471)
Q Consensus 455 ~~~l~~~l~~~ 465 (471)
+++|+++++++
T Consensus 413 v~~l~~al~~~ 423 (423)
T PRK05964 413 TDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHhhC
Confidence 99999999764
No 253
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.87 E-value=1.3e-19 Score=176.68 Aligned_cols=346 Identities=16% Similarity=0.188 Sum_probs=229.9
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|..+||+..+.-+ ++. +|.|.+|+.+++.++. .|+.+ .++.-.+++.+.+..+ ..+.|-++|++|+|..
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTEAtm 123 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTEATM 123 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC-CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhHHHH
Confidence 67889999888844 333 6889999999998875 46543 3556666677766554 5589999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cC--C-----------------EEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARI-AD--A-----------------TPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G--~-----------------~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+++..- -..|.|+..+-+|++..+.+.. +| . ..+.+|+ + |++.+++++.+
T Consensus 124 sAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y------N-D~~al~~~~~~ 196 (432)
T COG0001 124 SAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY------N-DLEALEEAFEE 196 (432)
T ss_pred HHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC------C-CHHHHHHHHHH
Confidence 8888652 2348899999999988765432 22 1 1222222 2 99999999875
Q ss_pred C---CcEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 228 K---SRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 228 ~---~~~i~i-~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
. ..+|++ +-..|..=+...++.+++|.++|++| +.++|.||+...|...-.+...+..+.++ +.+|+|.
T Consensus 197 ~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~-G~lLI~DEViTGFR~~~gGaq~~~gi~PD------lttlGKi 269 (432)
T COG0001 197 YGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH-GALLIFDEVITGFRVALGGAQGYYGVEPD------LTTLGKI 269 (432)
T ss_pred cCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchhhcccCCcccccccCcCcc------hhhhhhh
Confidence 3 334444 33377555577788899999999999 99999999999887653344445555433 7779999
Q ss_pred cCccchhheeeEcCHHHHHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 304 FAMTGWRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
+| .|+.+|.+.+++++++.+... .+..+++.++++..|..+.|+.-...+...+++.+.-.+.++-+.+.+.+. |
T Consensus 270 IG-GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g 347 (432)
T COG0001 270 IG-GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-G 347 (432)
T ss_pred hc-CCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 99 999999999999999977533 334567789999999998887521101123333333333344444444444 6
Q ss_pred Ceee-CCCcceEE-eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMS-EPQGAFYL-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~-~p~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l 458 (471)
+.+. .-.+++|- ++.-...........+....-..++..|+++ ||++.|+. | ...=+|.++++++|++.++++
T Consensus 348 ~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~-GV~l~ps~-~---ea~flS~ahte~di~~~~~a~ 422 (432)
T COG0001 348 IPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNR-GVYLAPSQ-F---EAGFLSTAHTEEDIDRTLEAA 422 (432)
T ss_pred CCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhC-CcccCCcc-c---cceeeecccCHHHHHHHHHHH
Confidence 5543 23445543 3322111111111111111234666788876 99999964 1 123488888999999999999
Q ss_pred HHHHHhhC
Q 012095 459 KKGLLTLR 466 (471)
Q Consensus 459 ~~~l~~~~ 466 (471)
.++++++.
T Consensus 423 ~~~~~~~~ 430 (432)
T COG0001 423 DEAFKELA 430 (432)
T ss_pred HHHHHHhh
Confidence 99988765
No 254
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=6.4e-19 Score=172.15 Aligned_cols=308 Identities=20% Similarity=0.291 Sum_probs=212.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y 189 (471)
....+++.+.+..++...|+ -..++.+++++|+ .....+.++++|.||.++++++ +.|||+|+++.-+|
T Consensus 15 ~~e~~~v~~vl~sg~i~~G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 15 EEELAAVQEVLKSGWLTGGP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred hHHHHHHHHHHHcCCeecCh--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence 56788888888887766644 4588999999996 4567888899999999999866 58999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 190 ~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
......+...|+++++|+++++ .|++|++.++++|++++|+|+..+- -|...+ +++|.++|++| +++||+|.
T Consensus 85 vATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~d---m~~i~~la~~~-~l~vIEDa 156 (374)
T COG0399 85 VATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCD---MDAIMALAKRH-GLPVIEDA 156 (374)
T ss_pred HHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCCC---HHHHHHHHHHc-CCeEEEEc
Confidence 9999999999999999999874 5889999999999999999995443 577777 88999999999 99999999
Q ss_pred CCCccc-cCCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEcC-HHHHHHHHHHHhccc-------------
Q 012095 270 IYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT------------- 332 (471)
Q Consensus 270 ~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~------------- 332 (471)
+++... |.|....++. .+.+.|| .|.++ +| --|.++.+ +++.++++.++.+..
T Consensus 157 Aqa~Ga~y~gk~vGt~G--------d~~~fSF~~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~ 226 (374)
T COG0399 157 AQAHGATYKGKKVGSFG--------DIGAFSFHATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEEL 226 (374)
T ss_pred chhccCeecCccccccc--------ceEEEEecCCCCcc-cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeec
Confidence 998644 4443222222 1556666 69987 55 56888875 567777766543321
Q ss_pred ---CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcc---eE-EeEecCCccCCcc
Q 012095 333 ---SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGA---FY-LFIDFSTYYGSEA 404 (471)
Q Consensus 333 ---~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g---~~-~~~~~~~~~~~~~ 404 (471)
+-.+.+..++...-|+ .+++..++-++..+...+.|++++++.+.. +.+. ++ ..+.+++. +
T Consensus 227 G~N~rm~~iqAAigl~QL~-------~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~-~--- 295 (374)
T COG0399 227 GYNYRLTEIQAAIGLAQLE-------RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE-G--- 295 (374)
T ss_pred ccccCHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-C---
Confidence 1223333333333333 344555555556666677787776554432 2222 22 23444431 1
Q ss_pred cCCCCCCCHHHHHHHHHHcCC----EEEECCCCC--------CC-----------CCcEEEEeec--CHHHHHHHHHHHH
Q 012095 405 EGFGKIENSESLCRYLLDKAQ----VALVPGDAF--------GD-----------DTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~g----V~v~pg~~f--------~~-----------~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.+-..+.+.|.++ | +...|-... .. ...+.+-+.. +++++++.++.|+
T Consensus 296 ------~~R~~l~~~L~~~-gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 296 ------ISRDALMESLKEA-GVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALK 368 (374)
T ss_pred ------CCHHHHHHHHHhC-CCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 1446677766554 4 445552211 00 1246666554 8899999999999
Q ss_pred HHHHh
Q 012095 460 KGLLT 464 (471)
Q Consensus 460 ~~l~~ 464 (471)
+++..
T Consensus 369 ~~~~~ 373 (374)
T COG0399 369 EVLGS 373 (374)
T ss_pred HHhcc
Confidence 88753
No 255
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.86 E-value=1.5e-19 Score=170.70 Aligned_cols=369 Identities=14% Similarity=0.179 Sum_probs=250.7
Q ss_pred ccccccccccccccCCChHHHHHHHHHHHHh----------c-CCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CC
Q 012095 62 VQVDVSLSPRVNAVKPSKTVAITDQATALAQ----------A-GVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FT 126 (471)
Q Consensus 62 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~----------~-g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~---~~ 126 (471)
++||..+.+.+..-+-...+..+...+++.. . .+++--.++|+ ....-++.+.+|+.+.+++. ..
T Consensus 127 F~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAG 206 (570)
T KOG1360|consen 127 FDYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAG 206 (570)
T ss_pred ccHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcC
Confidence 4556556555554444433333333322221 1 12333344454 55666899999999998751 11
Q ss_pred C----CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE
Q 012095 127 R----YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT 202 (471)
Q Consensus 127 ~----Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~ 202 (471)
+ -+.+.-..+|.+.++++.++... +--..+++.|-++ |..+.+. -||-+|.-++..+.+....++..++.
T Consensus 207 GTRNIsG~s~~hv~LE~eLA~LHqK~aA--LlFsSCfVANDst--LftLak~--lpgcei~SD~gNHASMI~GIrns~v~ 280 (570)
T KOG1360|consen 207 GTRNISGHSKHHVRLEAELADLHQKEAA--LLFSSCFVANDST--LFTLAKK--LPGCEIFSDEGNHASMIQGIRNSRVP 280 (570)
T ss_pred CccccCCCCchhhhHHHHHHHHhcCcce--eeeeeeeeccchH--HHHHHHH--CCCcEEeccccchHHHHHHhhhcCCc
Confidence 1 11223345666677766532111 0112333334433 3333332 38889999999999999999999988
Q ss_pred EEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC
Q 012095 203 PVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 278 (471)
Q Consensus 203 ~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~ 278 (471)
-..+..+ |+++|++++.. .||.|-+.+.+.++|.+.| +++|++++++| +.+-++||++.-..|++
T Consensus 281 K~IFrHN-------D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDvah~y-GAiTFlDEVHAVGlYG~ 349 (570)
T KOG1360|consen 281 KHIFRHN-------DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDVAHKY-GAITFLDEVHAVGLYGP 349 (570)
T ss_pred ceeeccC-------CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHHHHHh-CceeeeehhhhhccccC
Confidence 6666542 88999988853 5788889999999999999 99999999999 99999999999888876
Q ss_pred CCccccccCCC-CCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC--CCChHHHHHHHHHHhccCCChH
Q 012095 279 ATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS--GASSISQKAGVAALGLGYAGGE 355 (471)
Q Consensus 279 ~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~--~~~~~~q~aa~~~L~~~~~~~~ 355 (471)
.+.. +..-++ +..-.|+.+++.|+||.-| ||+.+...+++.++.+...+.+ +.++.....+..+++... .+
T Consensus 350 rGaG-vgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk--~~ 423 (570)
T KOG1360|consen 350 RGAG-VGERDGVMHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILK--SE 423 (570)
T ss_pred CCCC-ccccCCcchhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHh--hh
Confidence 5432 222222 2334588999999999898 9999999999999988665543 445555566666665311 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC
Q 012095 356 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 435 (471)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~ 435 (471)
.-..++...+++..++.+.|.++ |+.+.+ .....+-+++.+. ..+.+.++.|+.++||+|.......
T Consensus 424 eg~~lR~~hqrnv~~~kq~l~~~-GiPVi~-~pSHIiPv~vgda-----------~l~~~~sd~Li~~h~iYvQaINyPT 490 (570)
T KOG1360|consen 424 EGRVLRRQHQRNVKYVKQLLMEL-GIPVIP-NPSHIIPVRVGDA-----------ALAKQASDILISKHNIYVQAINYPT 490 (570)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHc-CCcccC-CCcceeeeeccCH-----------HHHHHHHHHHHHhcCeEEEeccCCc
Confidence 12455666777888888999888 888874 4445577777653 1467889999999999999887665
Q ss_pred C---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 436 D---DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 436 ~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
. ...+||+... +++.++.+++.+..+..++.
T Consensus 491 V~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v~ 526 (570)
T KOG1360|consen 491 VARGTERLRIAPTPHHTPQMMNILVNALLDVWNEVG 526 (570)
T ss_pred ccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3 3578998765 88999999999999887754
No 256
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=6.5e-19 Score=177.48 Aligned_cols=342 Identities=15% Similarity=0.069 Sum_probs=227.1
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
+..|.|-..++.. ++.+.+++...+.+.. ..|+......++.....++..+.||.. .-||-.-+|+..
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~--~anvqp~Sg~~A- 123 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAE--HAYVQPHSGADA- 123 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCC--cccccCCCcHHH-
Confidence 4568888787764 5567777766554421 234445566777777788888888853 356666666655
Q ss_pred HHHHHHHhcCC-------------------------------CCeEEEcCCCCCChH-----HHHHHcCCEEEEecCCCC
Q 012095 168 ILQAVLAVCSP-------------------------------GDEVIIPAPFWVSYP-----EMARIADATPVILPTRIS 211 (471)
Q Consensus 168 l~~~~~~l~~~-------------------------------gd~Vlv~~p~y~~~~-----~~~~~~G~~~~~v~~~~~ 211 (471)
...++.++++| ||+|+..++...++. ..+.....+.+.++++.+
T Consensus 124 n~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~ 203 (493)
T PRK13580 124 NLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPD 203 (493)
T ss_pred HHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcc
Confidence 55578888876 899998766554332 122222356677777643
Q ss_pred CCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 212 ~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
...+|++++++.++++++.|+++..+|- |...+ +++|.++|+++ ++++++|++|....+++...... .....
T Consensus 204 -~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~d---l~~i~eia~~~-gA~L~VD~AH~~Gligg~~~~~~--~~~~~ 275 (493)
T PRK13580 204 -TGLLDYDEIAALAREFKPLILVAGYSAY-PRRVN---FAKLREIADEV-GAVLMVDMAHFAGLVAGKVFTGD--EDPVP 275 (493)
T ss_pred -cCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcC---HHHHHHHHHHc-CCEEEEECchhhceeccccchhh--cCCCC
Confidence 3569999999999988888888888776 44778 89999999999 99999999999766653322100 10112
Q ss_pred CceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
+..++++|++|++ .|-+.|++++++++++.+.+.......++.+....++..++.+-. .....+.++++.++.++|
T Consensus 276 ~~D~vtgT~hKaL--~GP~GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~--~~ef~~y~~~l~~Na~~L 351 (493)
T PRK13580 276 HADIVTTTTHKTL--RGPRGGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR--TPEFQKYAQQVVDNARAL 351 (493)
T ss_pred CCcEEEeCChhhc--cCCCeEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHH
Confidence 3458899999998 233459999999999988654433333444444443444444311 112255678888899999
Q ss_pred HHHhcCCCCCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC------CCcEEEEe
Q 012095 372 VKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------DTCIRISY 444 (471)
Q Consensus 372 ~~~L~~~~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~------~~~iRis~ 444 (471)
.+.|.+. |+.+.. ...+..+++.+.+. ......+.+.|++.||.+.+-..... ...|||+.
T Consensus 352 a~~L~~~-G~~vv~ggTdshIV~V~lg~~-----------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 352 AEGFLKR-GARLVTGGTDNHLVLIDVTSF-----------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHHHHhc-CCCccCCCCCCCEEEEEeCCH-----------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 9999887 887652 22345578888642 01232344344556999986554433 35799997
Q ss_pred ec------CHHHHHHHHHHHHHHHHhh
Q 012095 445 AA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 445 ~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
.. ++++++++++.|.++++..
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 75 5799999999999988753
No 257
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=4.5e-19 Score=178.54 Aligned_cols=301 Identities=20% Similarity=0.242 Sum_probs=209.9
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH-HHHHHHHHHhcC---CCCeEEEcCCCCCChHHHHHHcCCEEEEecC-
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAK-QSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIADATPVILPT- 208 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~-~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~- 208 (471)
...+.+.+.+.+.+..|.+ +.+..++++|+| .++.+++.++-. +||+|+++.-+|.+....+..+|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 4566677777777777753 224688888888 577777666532 5899999999999999999999999999996
Q ss_pred CCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 209 RISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
..+++|.+|+++|++++++ +..++++.+|+ ||.+...+++++|+++|++| ++++|+|++|+... ..+.
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~-gI~lIvDaAyg~~~------~~~~ 252 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANY-DIPHIVNNAYGLQS------NKYM 252 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHc-CCEEEEECcCcCcC------hhhh
Confidence 2346799999999999986 45566677775 45545556699999999999 99999999998522 1111
Q ss_pred cC--CC-CCCc-eEEEecCCcccCccchhheeeE-c-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 286 SL--PG-MWER-TLTVNGFSKAFAMTGWRLGYIA-G-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 286 ~~--~~-~~~~-~i~~~S~SK~~g~~G~R~G~v~-~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.+ .+ ..++ .+++.|++|.+.++|+ |+++ + ++++++.+...... ...+.+.|.+...++.. ..+++++
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g--~~~~s~~~~~~~~ll~~---G~~g~~~ 325 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPG--RASASPSLDVLITLLSL---GSKGYLE 325 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccC--CCCChHHHHHHHHHHHh---CHHHHHH
Confidence 11 01 0112 5778899999988876 5544 6 67888887765322 23556788888888876 4788999
Q ss_pred HHHHHHHHHHHHHHHhcCC---CCCeeeCC-CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCE---E-EECC
Q 012095 360 MVKAFRERRDFLVKSFGEL---EGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV---A-LVPG 431 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~---~g~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV---~-v~pg 431 (471)
+++++.++++++.+.|.++ -|..+... ...+-+-+.+....+ .+...+...|..+ +| - |.||
T Consensus 326 li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~---------~~~~~~g~~l~~~-~v~g~r~v~~~ 395 (444)
T TIGR03531 326 LLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKG---------KDPTMLGSMLYSR-RVTGPRVVTNG 395 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccc---------cCHHHHHHHHHhC-CCCCceeecCC
Confidence 9999999999999999875 25555533 333434444432210 2566777777665 44 2 3455
Q ss_pred C-------CC---CCC------CcEEEEee--cCHHHHHHHHHHHHHH
Q 012095 432 D-------AF---GDD------TCIRISYA--ASLTTLQAAVERIKKG 461 (471)
Q Consensus 432 ~-------~f---~~~------~~iRis~~--~~~e~i~~~~~~l~~~ 461 (471)
. .| +.. .|+-++.+ .+.+|++.++.+|.++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 396 DSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 5 22 221 25544433 3889999999999875
No 258
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.4e-18 Score=167.83 Aligned_cols=325 Identities=20% Similarity=0.234 Sum_probs=242.3
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 188 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~ 188 (471)
.++.+.+++.+.. ..+..| -..++.+.+.+.+...++.. +.+-++++.+++.+++.++..+++|||+||+....
T Consensus 16 v~~~V~~am~~~~---~~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG 89 (383)
T COG0075 16 VPPRVLLAMARPM---VGHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNG 89 (383)
T ss_pred CCHHHHHHhcCCC---CCCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence 4677777666432 223333 33566667777777777742 23556677889999999999999999999988776
Q ss_pred CCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeE
Q 012095 189 WVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLL 264 (471)
Q Consensus 189 y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ 264 (471)
..+.. ++++.+|++++.+.... +-.+|++++++++++ +.+++.+++--.+||+..| +++|+++|++| +.+
T Consensus 90 ~FG~R~~~ia~~~g~~v~~~~~~w--g~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~-g~l 163 (383)
T COG0075 90 KFGERFAEIAERYGAEVVVLEVEW--GEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEH-GAL 163 (383)
T ss_pred hHHHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHc-CCE
Confidence 66544 78999999999998764 345899999999984 4677888777779999999 99999999999 999
Q ss_pred EEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc-cchhheeeEcCHHHHHHHHHH---------------H
Q 012095 265 VLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKI---------------Q 328 (471)
Q Consensus 265 ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~~~~~i~~l~~~---------------~ 328 (471)
+|+|.+-+. ++. . ..++ +|+-.+++.+--|.++. || +|++..+++.++++... .
T Consensus 164 ~iVDaVsS~---Gg~-~---~~vd-~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~ 233 (383)
T COG0075 164 LIVDAVSSL---GGE-P---LKVD-EWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYM 233 (383)
T ss_pred EEEEecccC---CCc-c---cchh-hcCccEEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHH
Confidence 999988764 121 1 1222 35666888889999964 44 78888888777765321 1
Q ss_pred ---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC---CcceEEeEecCCccCC
Q 012095 329 ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYYGS 402 (471)
Q Consensus 329 ---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---~~g~~~~~~~~~~~~~ 402 (471)
..+.++++....++...+|+.- .++.++...++++++.+.++++++.+ |++.... .......+.+|..+
T Consensus 234 ~~~~~~p~Tppv~~i~aL~~al~~i--~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~-- 308 (383)
T COG0075 234 EKKGSTPYTPPVNLIYALREALDLI--LEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV-- 308 (383)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC--
Confidence 2445667777778888888752 24668999999999999999999998 8877651 12233456677643
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCCC
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPGV 469 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~~ 469 (471)
+..++...+++++||.+.+|........+||.... +..++..++..|+.+++++..+.
T Consensus 309 ---------~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g~~~ 368 (383)
T COG0075 309 ---------DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELGVKV 368 (383)
T ss_pred ---------CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcCCcc
Confidence 44445557888999999998876667899999776 78999999999999999876543
No 259
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.85 E-value=2.9e-18 Score=175.39 Aligned_cols=359 Identities=14% Similarity=0.112 Sum_probs=215.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-EEEeCChHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ-ILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~-i~it~G~~~a 167 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+....++ ..-..+.+..+++.+.+..+....... ++.+++++++
T Consensus 36 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT-LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred CCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc-cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 36888999988863 3444 78899999998876332221 112245666777777665432111134 4556899999
Q ss_pred HHHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCC--CcC----CH----HHHH
Q 012095 168 ILQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISEN--FLL----DP----KVLE 222 (471)
Q Consensus 168 l~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~--~~l----d~----e~l~ 222 (471)
...+++.... .| ..|+....+|++....+..... .+..++...... |+. +. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 9988886431 33 6788888889887654443211 122233221000 000 11 1233
Q ss_pred hhhc------cCCcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceE
Q 012095 223 SKLT------EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (471)
Q Consensus 223 ~~l~------~~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 295 (471)
+.+. ++..++++... +|+...+.+++.+++|.++|++| |+++|.||+|.+|...|. ...+.......| |
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~-~~a~~~~gv~PD--i 270 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH-DIKLILDEVQAGFGRSGT-MFAFEHAGIEPD--F 270 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCCc-hhHHHHcCCCCc--E
Confidence 3332 24556666444 55555678999999999999999 999999999998755442 222222221112 3
Q ss_pred EEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
++ |||.++ .|+++|+++++++ ++.+.......+++.++++++++.++|+.- ++ +.+.+.++++.+++.+.|
T Consensus 271 v~--~gK~l~-~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i---~~--~~l~~~~~~~g~~l~~~L 341 (442)
T TIGR00709 271 VV--MSKAVG-GGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYW---KD--DNLAQNAQERGERITSFL 341 (442)
T ss_pred EE--Eccccc-CCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHH
Confidence 33 899998 5899999999988 454432233467789999999999999741 11 234455666666666666
Q ss_pred cCC----CCCeeeCCCcceEEeEecCCccCCcc-c-CCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--
Q 012095 376 GEL----EGVKMSEPQGAFYLFIDFSTYYGSEA-E-GFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 446 (471)
Q Consensus 376 ~~~----~g~~~~~p~~g~~~~~~~~~~~~~~~-~-~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-- 446 (471)
+++ +.+.-+... |.++.+.+.+...... . ... .......+...++++ ||++.+.... .+.+|+....
T Consensus 342 ~~l~~~~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~--~~~l~~~Ppl~i 417 (442)
T TIGR00709 342 DDMIKEHPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN-GLLLETGGRE--GEVFRLLCPITI 417 (442)
T ss_pred HHHHHhCCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEECCCCC
Confidence 543 222222333 4445555532100000 0 000 000134566777765 9998774322 3678887775
Q ss_pred CHHHHHHHHHHHHHHHHhhCCC
Q 012095 447 SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
+++++++++++|.+++.++..+
T Consensus 418 t~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 418 DQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999876443
No 260
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.84 E-value=8.7e-18 Score=167.44 Aligned_cols=355 Identities=14% Similarity=0.142 Sum_probs=231.6
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCC--C---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFD--T---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 159 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~--~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~ 159 (471)
++.+.+++.|.+...|...+-... + -..+.+++..++..+...|+.++...+|.+.+++++ ..+.++
T Consensus 26 ~r~~~l~~ag~n~f~l~~~~v~IDLlSDS~T~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~vAe~l--------G~e~aV 97 (460)
T PRK13237 26 EREAAMKEAGYNTFLLRSEDVYIDLLTDSGTNAMSDRQWAGMMIGDEAYAGSRNFYHLEETVQEYY--------GFKHVV 97 (460)
T ss_pred HHHHHHHHcCCCcccCCcCcEEEECcccCCchhccHHHHHHHhhcchhhcCCCcHHHHHHHHHHHH--------CCCeEE
Confidence 444556677877777777662211 1 144455545555556678998889999999999997 335799
Q ss_pred EeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHHHHcCCEEEEecCC--------CCCCCcCCHHHHHhhhccC--
Q 012095 160 VSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTR--------ISENFLLDPKVLESKLTEK-- 228 (471)
Q Consensus 160 it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~--------~~~~~~ld~e~l~~~l~~~-- 228 (471)
.+++++.++.+++...++|||+| +..+| ......+...|+..+.+..+ ....+.+|++.|+++++++
T Consensus 98 ~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~ 175 (460)
T PRK13237 98 PTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA 175 (460)
T ss_pred EeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccC
Confidence 99999999998777778999975 44433 44444478888866555322 1235789999999999753
Q ss_pred --CcEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc----cc---CCCCccccc----cCCCCCCce
Q 012095 229 --SRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI----IY---APATHTSFA----SLPGMWERT 294 (471)
Q Consensus 229 --~~~i~i~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~----~~---~~~~~~~~~----~~~~~~~~~ 294 (471)
++++.+.+++|.. |.+.|.+++++|.++|++| |+.||+|.+.... +- .+....++. .+.. --.
T Consensus 176 ~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~-Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s--~aD 252 (460)
T PRK13237 176 ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKH-GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFS--YAD 252 (460)
T ss_pred CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHc-CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccC--cCc
Confidence 3456677788877 7999999999999999999 9999999987632 10 111112221 1111 123
Q ss_pred EEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcc----cC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF----TS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~----~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r 368 (471)
+.+.|++|.++.+ . -|+++. ++++.++++...-.+ ++ +.+.-...+++..|.+.. ..+++... -.+.
T Consensus 253 ~~t~S~~K~~~~~-~-GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~-~~~y~~~r----i~~~ 325 (460)
T PRK13237 253 GCTMSGKKDCLVN-I-GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESV-QYEYIEHR----VGQV 325 (460)
T ss_pred EEEEeCCCCCCCC-C-ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhc-hHHHHHHH----HHHH
Confidence 6777899998754 1 288776 567888887764322 11 222223333333344311 12333333 3455
Q ss_pred HHHHHHhcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCCHHHHHHHHHHcCCEEEE-CCCC-CCC---------
Q 012095 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVALV-PGDA-FGD--------- 436 (471)
Q Consensus 369 ~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~-pg~~-f~~--------- 436 (471)
++|.+.|.+. |+.+..|.||.-++++..... +....++ ....++..|..+.||-.. -|+. ++.
T Consensus 326 ~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph~~~~~~----p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~ 400 (460)
T PRK13237 326 RYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHLPQDQF----PAQALAAELYIESGVRSMERGIVSAGRDPKTGENHY 400 (460)
T ss_pred HHHHHHHHHC-CCceecCCCceEEEEEhHHhCCCCCcccC----hHHHHHHHHHHHhCcCeEeecceecccCCCCCccCC
Confidence 6777777776 999999999998888754321 1111222 678888888888898543 2332 111
Q ss_pred --CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012095 437 --DTCIRISYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 437 --~~~iRis~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
-..+|+++.. |.+.++...++|..+.++
T Consensus 401 ~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 401 PKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred CccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 1479999987 889999999999888764
No 261
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=2.6e-18 Score=174.69 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=151.8
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~ 209 (471)
..+|++.++++. | .+..++++++++++..++.++++|||+|+++.+.|..... .+...|++++.++.
T Consensus 65 ~~~le~~lA~l~----g----~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 65 NAVLEERVAALE----G----GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHHh----C----CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 455666666664 3 2357788888999999999999999999999999986543 46678999998875
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++ ++++|+|++|.... ...++ .
T Consensus 136 ------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~-gi~livD~a~a~~~----~~~pl-~--- 197 (427)
T PRK05994 136 ------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRA-GLPLIVDNTLASPY----LIRPI-E--- 197 (427)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCccccc----cCCcc-c---
Confidence 2889999999989999999999999999999 88999999999 99999999997421 11111 1
Q ss_pred CCCceEEEecCCcccCccchhheeeEcC-H------------------H-----HHHHH----------HHHHhcccCCC
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGP-K------------------H-----FVAAC----------NKIQSQFTSGA 335 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~------------------~-----~i~~l----------~~~~~~~~~~~ 335 (471)
.+-.+++.|++|.+|-+|-.+|.++.. . . +.+.+ .+.......+.
T Consensus 198 -~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 276 (427)
T PRK05994 198 -HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAI 276 (427)
T ss_pred -cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCC
Confidence 244499999999997556556654431 1 0 22111 11122234445
Q ss_pred ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 336 SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 336 ~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
+++..+.+..-| +.+....++..++...+.+.|++.|++.
T Consensus 277 ~~~~A~l~~~~l-------~tL~~r~~~~~~~a~~la~~L~~~p~v~ 316 (427)
T PRK05994 277 SPFNAFLILTGI-------ETLPLRMQRHSDNALAVAEWLKGHPKVS 316 (427)
T ss_pred CHHHHHHHHcCc-------ccHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 555433333322 3356666677777888888888877653
No 262
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.84 E-value=4.2e-18 Score=171.74 Aligned_cols=334 Identities=14% Similarity=0.134 Sum_probs=216.7
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. +|.+.+++.+++.+....+ .....++...+++++.+..+ .+.++++++++++..
T Consensus 34 dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~~----~~~v~f~~SGseA~e 107 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHSC----FDKVFFANSGAEANE 107 (395)
T ss_pred CCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhccC----CCEEEEeCCcHHHHH
Confidence 578899998864 33444 6889999999887533222 22346778888998875422 368999999999999
Q ss_pred HHHHHhc------CCC-CeEEEcCCCCCChHH-HHHHcCCEEE---EecCCCCCCC----cCCHHHHHhhhccCCcEEEE
Q 012095 170 QAVLAVC------SPG-DEVIIPAPFWVSYPE-MARIADATPV---ILPTRISENF----LLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 170 ~~~~~l~------~~g-d~Vlv~~p~y~~~~~-~~~~~G~~~~---~v~~~~~~~~----~ld~e~l~~~l~~~~~~i~i 234 (471)
.+++... ++| +.|+..+.+|++... .+...|.... ..|.. .++ ..|++.+++.+.+++.+|++
T Consensus 108 ~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 108 GAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQV--PGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCC--CCceeeCCchHHHHHHHcCCCceEEEE
Confidence 9988774 134 568888888877653 3343343211 11111 111 13789999998777777777
Q ss_pred cCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccchhhe
Q 012095 235 CSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLG 312 (471)
Q Consensus 235 ~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G 312 (471)
...++..|... +++.+++|.++|++| ++++|+||+|..+.-.|... .....+.. | +.+|+|.+| .|+.+|
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~GRtG~~~a~~~~gv~P--D----i~t~gK~lg-~G~p~~ 257 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQH-GLLLIVDEVQTGCGRTGTLFAYELSGIEP--D----IMTLGKGIG-GGVPLA 257 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCcchhhHhhcCCCC--c----eeeehhhhh-CCcceE
Confidence 76677777654 689999999999999 99999999999753223211 01111211 2 467899998 789999
Q ss_pred eeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC---CCCeeeCCCcc
Q 012095 313 YIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKMSEPQGA 389 (471)
Q Consensus 313 ~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~~~p~~g 389 (471)
.+++++++.. +.......+++.++++.+++.+.|+.- + -+++.+..+++-+++.+.|+++ .++...... |
T Consensus 258 av~~~~~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l---~--~~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vrG~-G 330 (395)
T PRK03715 258 ALLAKAEVAV-FEAGDQGGTYNGNPLMTAVGVAVISQL---L--APGFLEGVRARGEYLKEKLLELSEERGLEGERGE-G 330 (395)
T ss_pred EEEEcccccc-ccCCCcCCCCCCCHHHHHHHHHHHHHH---H--hccHHHHHHHHHHHHHHHHHHHhhcCCcCeEEcc-e
Confidence 9999988853 221112345567888888888888741 1 1234555555555665555542 134333333 4
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHH--cCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLD--KAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~--~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
..+-+.+.+. ....+.+.+.+ +.||.+.+.. .+.+|++... ++++|++++++|.++++++
T Consensus 331 lm~~i~l~~~------------~~~~~~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 331 LLRALLLGKD------------IGPQIVEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred eEEEEEecCc------------hHHHHHHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 4455666431 12333333221 1289886532 3679999886 9999999999999998764
No 263
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.4e-18 Score=164.78 Aligned_cols=312 Identities=19% Similarity=0.182 Sum_probs=205.2
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC
Q 012095 108 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 187 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p 187 (471)
.+.+++.+++.++-..+...|+.++-+.++.+.+++. +| . +.++++.++|++..+++.+.++||+.|++..-
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~----~g---~-~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~ 82 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAEL----FG---K-EAALFVPSGTQANQLALAAHCQPGESVICHET 82 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHH----hC---C-ceEEEecCccHHHHHHHHHhcCCCCeEEEecc
Confidence 4568899999887544567786665555555555555 45 2 78999999999999999999999999999988
Q ss_pred CCCChHH--HHHHcC-CEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 012095 188 FWVSYPE--MARIAD-ATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 188 ~y~~~~~--~~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~ 258 (471)
+|....+ .....+ +. .++..+..+..+++|++++.+.. .+..+++.+.+|-.|+++|.+++++|.++|+
T Consensus 83 aHi~~~E~Ga~~~~~~~~--~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k 160 (342)
T COG2008 83 AHIYTDECGAPEFFGGGQ--KLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCK 160 (342)
T ss_pred ccceecccCcHHHHcCCc--eeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHH
Confidence 8876554 233333 33 33333445567999999998753 2445555555557899999999999999999
Q ss_pred hCCCeEEEEccC--CCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE-cCHHHHHHHHHHHhcccCCC
Q 012095 259 KHPRLLVLSDEI--YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQFTSGA 335 (471)
Q Consensus 259 ~~~~~~ii~De~--y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~~i~~l~~~~~~~~~~~ 335 (471)
+| ++.|..|-+ +..+...+ ++...+.. ...++.-++||..+.++ |.++ ++.++++.+..++.......
T Consensus 161 ~~-~l~LHmDGAR~~nA~valg---~~~~~~~~--~~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~ 231 (342)
T COG2008 161 EH-GLPLHMDGARLANALVALG---VALKTIKS--YVDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLM 231 (342)
T ss_pred Hh-CCceeechHHHHHHHHHcC---CCHHHHHh--hCCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccH
Confidence 99 999999987 33333223 22222221 12255556899987665 7755 79999999887766555444
Q ss_pred ChHHH--HHHHHHHhccCCChHHHHHHHHHHHHH--HHHHHHHhcCCCCCeeeCC-CcceEEeEecCCccCCcccCCCCC
Q 012095 336 SSISQ--KAGVAALGLGYAGGEVVSKMVKAFRER--RDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 336 ~~~~q--~aa~~~L~~~~~~~~~~~~~~~~~~~~--r~~l~~~L~~~~g~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
+.... .....+|++ .-|.. .....+ ...|.+.|.+.+|+++..| +.++ +|+++++..
T Consensus 232 ~k~r~laA~~~~~l~~----~~~~~---~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~-vf~~l~~~~---------- 293 (342)
T COG2008 232 RKARFLAAQGLYALED----DVWRL---AADHANAMAARLAEGLEAKPGVKLAFPVETNM-VFVRLPESA---------- 293 (342)
T ss_pred hhhhHHHHHHHHHHhc----cHHHH---HHHHHHHHHHHHHHhhhhcCCceeccCCcccE-EEEECChHH----------
Confidence 33333 333444543 22322 222333 7778899988889988765 6565 888887531
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
.+...+...+ ...|+...+++ ..+|+..+. +++++++++..+++++
T Consensus 294 i~~l~~~~~~-~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 IEALRLAGAL-FYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHHhhchh-heeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 0122222222 23355554432 358887765 8899999999888764
No 264
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=7.7e-18 Score=172.20 Aligned_cols=356 Identities=15% Similarity=0.144 Sum_probs=213.7
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+.. .+.+.....+....+++.+.+..+.. ..+.++++++++++.
T Consensus 39 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~-~~~~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~SGseA~ 116 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFI-HYTPAYMYHEPLVRLAKKLCELAPGD-FEKRVTFGLSGSDAN 116 (445)
T ss_pred CCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 3688899998875 34444 7899999999987632 22121123455566666666544311 125899999999999
Q ss_pred HHHHHHhc-CCC-CeEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCCC--Cc-CC-------HHHHH
Q 012095 169 LQAVLAVC-SPG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISEN--FL-LD-------PKVLE 222 (471)
Q Consensus 169 ~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~~~--~~-ld-------~e~l~ 222 (471)
..+++... -.| ..|+..+.+|++....+. ..+. .++.+|...... +. .+ ++.++
T Consensus 117 e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 196 (445)
T PRK08593 117 DGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLK 196 (445)
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHH
Confidence 98888642 133 568888888887654332 2221 122333221100 00 01 23444
Q ss_pred hhhc-----cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEE
Q 012095 223 SKLT-----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (471)
Q Consensus 223 ~~l~-----~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (471)
+.+. +++.+|++...++..|.. .+++.+++|.++|++| ++++|.||+|..+-..|.. .....+.-..|
T Consensus 197 ~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tg~GrtG~~-~a~~~~gv~pD---- 270 (445)
T PRK08593 197 EMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH-GILFAVDDIQQGLGRTGKW-SSISHFNITPD---- 270 (445)
T ss_pred HHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchH-HHHHhcCCCCC----
Confidence 4442 345566666567667875 7899999999999999 9999999999876333321 11111111112
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
+-+|+|.++ .|+++|++++++++++.+......++++.++++.+++.+.|+.-.. ++.+++..+.-+..++.+.+..+
T Consensus 271 i~t~gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~-~~l~~~~~~~g~~l~~~L~~l~~ 348 (445)
T PRK08593 271 LMSFGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIED-ESLLQRSAEKGEYARKRFDQWVS 348 (445)
T ss_pred Eeeeccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 447899998 8899999999999998875433445777899999988888874211 12233333322333333333222
Q ss_pred CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHH
Q 012095 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAA 454 (471)
Q Consensus 377 ~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~ 454 (471)
+.+-+.-+... |.++.+.+....... .........+...|+++ ||++.+.. .+.+|++... ++++++++
T Consensus 349 ~~~~v~~vrG~-Gl~~gi~l~~~~~~~---~~~~~~~~~~~~~~~~~-Gv~~~~~~----~~~lr~~p~l~~t~~~id~~ 419 (445)
T PRK08593 349 KYNFVGDVRGY-GLSIGIDIVSDKKLK---TRDNEAALKICNYCFEH-GVVIIAVA----GNVLRFQPPLVITYEQLDTA 419 (445)
T ss_pred cCCcEEEEecc-ceEEEEEEecCCCcC---CCcHHHHHHHHHHHHHC-CeEEeccC----CCEEEEECCCccCHHHHHHH
Confidence 33322222333 333444443210000 00000235677777765 99987632 3578988775 99999999
Q ss_pred HHHHHHHHHhhC
Q 012095 455 VERIKKGLLTLR 466 (471)
Q Consensus 455 ~~~l~~~l~~~~ 466 (471)
+++|.++++++.
T Consensus 420 ~~~l~~~l~~~~ 431 (445)
T PRK08593 420 LNTIEQAFTALE 431 (445)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 265
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.84 E-value=4.7e-18 Score=174.68 Aligned_cols=337 Identities=12% Similarity=0.081 Sum_probs=215.4
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCC-CCCC---CCC---CHHHHHHHHHHHHHHhCCCCCCCcEEEe---CCh
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFT-RYTP---NAG---TLELRSAICHKLKEENGLSYTPDQILVS---NGA 164 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~-~Y~~---~~G---~~~lr~~ia~~~~~~~g~~~~~~~i~it---~G~ 164 (471)
+..|+|-..++-. ++.+++++...+.+... +|+. ..| ...+.+...+.+.+.+|. +++++.++ +|+
T Consensus 34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a--~~~~~~~~~~~~sg 109 (452)
T PTZ00094 34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGL--DPEEWGVNVQPYSG 109 (452)
T ss_pred HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCC--CcccceeecCCCch
Confidence 4578888888764 56788888777754221 2211 122 222322233455555664 55667666 788
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----------cCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEE
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----------ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLI 233 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----------~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~ 233 (471)
+++...++.+++++||.|++.+..|.++...... .+.+++.++++.+ ..+|+++|++++++ ++++++
T Consensus 110 t~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~--g~id~~~L~~~l~~~~~~lvi 187 (452)
T PTZ00094 110 SPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK--GLIDYDKLEELAKAFRPKLII 187 (452)
T ss_pred HHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC--CCcCHHHHHHHHHHhCCCEEE
Confidence 8999988999999999999987777665432211 1133445555543 56899999999954 677766
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+. ++.+|...+ +++|.++|+++ |+++++|+++.......... ..+. .+..+++.|++|+++ |.+.|+
T Consensus 188 ~~--~s~~g~~~d---i~~I~~i~~~~-ga~l~vDaaq~~G~i~~~~~----~~~~-~~~D~l~~S~hK~l~--GP~Gg~ 254 (452)
T PTZ00094 188 AG--ASAYPRDID---YKRFREICDSV-GAYLMADIAHTSGLVAAGVL----PSPF-PYADVVTTTTHKSLR--GPRSGL 254 (452)
T ss_pred Ee--CCCCCCccC---HHHHHHHHHHc-CCEEEEeccchhccccCCCC----CCCC-CCCcEEEcCCccCCC--CCCceE
Confidence 53 334999999 88889999999 99999999998654432111 1111 134488999999872 333488
Q ss_pred eEcCHHHHHHHHHHHh-----cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc
Q 012095 314 IAGPKHFVAACNKIQS-----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG 388 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~-----~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~ 388 (471)
+++++++.+.+..... .+..+++.....++.++++.. .....++..++..++++++.+.|.+. |+.+..+..
T Consensus 255 l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~--~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~ 331 (452)
T PTZ00094 255 IFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEV--QSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGT 331 (452)
T ss_pred EEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHH--hChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCC
Confidence 8887766554432211 112245555555666666641 12345667788889999999999886 887754321
Q ss_pred -ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE-CCCCCC----CCCcEEEEeec--C----HHHHHHHHH
Q 012095 389 -AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAFG----DDTCIRISYAA--S----LTTLQAAVE 456 (471)
Q Consensus 389 -g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~-pg~~f~----~~~~iRis~~~--~----~e~i~~~~~ 456 (471)
....++.+... + .+...+...| ++.||.+. +|.... .+++||+++.. + +++++++++
T Consensus 332 ~~~~~~v~~~~~-~---------~~~~~~~~~L-~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~ 400 (452)
T PTZ00094 332 DNHLVLVDLRPF-G---------ITGSKMEKLL-DAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVAD 400 (452)
T ss_pred CCceEeecCCcC-C---------CCHHHHHHHH-HHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHH
Confidence 22244444321 0 1455666654 66799994 443332 24789999865 3 899999999
Q ss_pred HHHHHHHh
Q 012095 457 RIKKGLLT 464 (471)
Q Consensus 457 ~l~~~l~~ 464 (471)
.|.++++.
T Consensus 401 ~l~~~~~~ 408 (452)
T PTZ00094 401 FLDRAVKL 408 (452)
T ss_pred HHHHHHHH
Confidence 99998874
No 266
>PRK06541 hypothetical protein; Provisional
Probab=99.83 E-value=7.3e-18 Score=172.80 Aligned_cols=354 Identities=14% Similarity=0.129 Sum_probs=219.6
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+... +.......+....+++.+.+..+. ..+.++++++++++..
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseAve 126 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAF-FPLWSYAHPPAIELAERLAALAPG--DLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcC-ccccccCCHHHHHHHHHHHHhCCC--CcCEEEEcCCcHHHHH
Confidence 688899998885 33444 78899999999876321 111122345556667666654331 2368999999999999
Q ss_pred HHHHHhcC-------C-CCeEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCC---CCcCC--------
Q 012095 170 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE---NFLLD-------- 217 (471)
Q Consensus 170 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~---~~~ld-------- 217 (471)
.+++.... + ...|+...-+|++....+... |. .+..+|..... .|.-+
T Consensus 127 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHH
Confidence 88886431 2 367888888888765433221 11 11223221100 01112
Q ss_pred HHHHHhhhc---cCCcEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT---EKSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~---~~~~~i~i~~p-~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+.+|..| ++++|.+. +++.+++|.++|++| |+++|.||+|..+--.|.. .......-..|
T Consensus 207 ~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tGfGR~G~~-~a~~~~gv~PD 284 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY-DVLLVSDEVICAFGRLGEM-FGCERFGYVPD 284 (460)
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCchh-hhhhhcCCCCC
Confidence 356777764 23445566666 88999865 588999999999999 9999999999765212211 01111111112
Q ss_pred ceEEEecCCcccCccch-hheeeEcCHHHHHHHHHHH----hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~~----~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
+ -+|||.++ .|+ ++|++++++++++.+.... ...+++.++++.+++.+.|+.- .-+.+.+..+++
T Consensus 285 --i--vt~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l-----~~~~~~~~~~~~ 354 (460)
T PRK06541 285 --I--ITCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIF-----EREGLLDHVRDN 354 (460)
T ss_pred --E--EEeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHH-----HhccHHHHHHHH
Confidence 3 35899998 897 9999999999998875421 2236667888888888887641 112455667777
Q ss_pred HHHHHHHhcCCCCC---eeeCCCcceEEeEecCCccCCcccCCCCCC----CHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 368 RDFLVKSFGELEGV---KMSEPQGAFYLFIDFSTYYGSEAEGFGKIE----NSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 368 r~~l~~~L~~~~g~---~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
.+++.+.|+++... ......|.| +-+.+.+.... ...+.... ....+.+.|+++ ||++.+.. . ..+.+
T Consensus 355 g~~l~~~L~~l~~~~~v~~vrg~Gl~-~~ie~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~-~-g~~~l 429 (460)
T PRK06541 355 EPAFRATLEKLLDLPIVGDVRGDGYF-YGIELVKDKAT-KETFTDDESERLLRGFLSPALFEA-GLYCRADD-R-GDPVV 429 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEEEecceE-EEEEEecCccc-ccCCcchhhhhhHHHHHHHHHHhC-CeEEEecC-C-CCCEE
Confidence 77777777765222 223345444 44454321000 00000000 012566777765 99998731 1 13679
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 441 RISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 441 Ris~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
||+.. .++++|++++++|.++++++.
T Consensus 430 rl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 430 QLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99988 499999999999999997643
No 267
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=6.8e-18 Score=171.40 Aligned_cols=156 Identities=13% Similarity=0.174 Sum_probs=124.8
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~ 208 (471)
-..+|++.++++. | .+..++++++++|+..++.+++++||+|+++...|......+ ...|++++.++.
T Consensus 65 ~~~~le~~lA~l~----g----~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALE----G----GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 3567777777775 3 234788999999999999999999999999999998765543 447999999985
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
+ |+++++++++++||+|++.+|+||+|.+.+ +++|+++|+++ ++++|+|.++..... ..++ .
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~-gi~livD~t~a~~~~----~~pl-~-- 198 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEA-GVPLLVDSTFTTPYL----LRPF-E-- 198 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHc-CCEEEEECCCccccc----CCch-h--
Confidence 3 899999999999999999999999999999 99999999999 999999999864211 1111 2
Q ss_pred CCCCceEEEecCCcccCccchhheeeEc
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
.+-.+++.|.+|.++-+|-.+|.++.
T Consensus 199 --~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 199 --HGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred --cCCCEEEeccccccCCCCCceEEEEE
Confidence 24459999999999766766666543
No 268
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=4.4e-18 Score=155.34 Aligned_cols=325 Identities=17% Similarity=0.255 Sum_probs=222.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~ 176 (471)
.+||-+.--.- |..++.+++.++.. +..-|+.++-..+|.+.+|+.++ +..-+++++|+...+..++--+-
T Consensus 23 ~vDLRSDTvT~-PTdeMr~am~eA~v-gDdVyGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNllaIm~Hc~ 93 (384)
T KOG1368|consen 23 SVDLRSDTVTV-PTDEMRRAMAEASV-GDDVYGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLAIMVHCH 93 (384)
T ss_pred ccccccccccC-ChHHHHHHHhhccc-CcccccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHHHHHHhc
Confidence 34554443222 24678888887653 34567777778899999999874 34457778887776665444445
Q ss_pred CCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--------CCcEEEEcCCCCCcc-cC
Q 012095 177 SPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--------KSRLLILCSPSNPTG-SV 244 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--------~~~~i~i~~p~NPtG-~~ 244 (471)
++|.+|++.+-++.-.++ +..+.|+.++.+... ++..+|++++++++.. .+++|++.|.+|-+| .+
T Consensus 94 ~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~v 171 (384)
T KOG1368|consen 94 QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKV 171 (384)
T ss_pred CCCceEEeccchheeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceE
Confidence 699999999988865443 466778888777654 4455899999999862 478999988876555 99
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCC--ccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee-eEcCHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYE--HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY-IAGPKHFV 321 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~-v~~~~~~i 321 (471)
+|.+++.++.++|++| ++.+.+|.+-- .-+-.+ .++..+....|.+-++ |||.+|.| +|- +++++++|
T Consensus 172 lPle~~~~v~~lak~~-glkLH~DGARi~NAavasg---V~vk~i~~~fDSVsiC--LSKglgAP---VGSViVG~k~FI 242 (384)
T KOG1368|consen 172 LPLEELDRVKALAKRH-GLKLHMDGARIFNAAVASG---VPVKKICSAFDSVSIC--LSKGLGAP---VGSVIVGSKDFI 242 (384)
T ss_pred eeHHHHHHHHHHHhcc-CCeeecchhhhhhHHHHcC---CCHHHHHHhhhhhhhh--hhccCCCC---cccEEEccHHHH
Confidence 9999999999999999 99999997732 111111 2222222222333233 88998744 676 55899999
Q ss_pred HHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC--CcceEEeEecCCc
Q 012095 322 AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFYLFIDFSTY 399 (471)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p--~~g~~~~~~~~~~ 399 (471)
++.+..+.....+.-..+..++++.... ++-+. ....-.++...+.+.++..+++++..| +.+| +.+.+-+.
T Consensus 243 ~kA~~~RKalGGGmRQsGvLaaaaLval----~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNi-v~~~l~q~ 316 (384)
T KOG1368|consen 243 DKARHFRKALGGGMRQSGVLAAAALVAL----DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNI-VNMVLCQA 316 (384)
T ss_pred HHHHHHHHHhcCchhHHHHHHHHHHHHh----hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcce-eeeecccc
Confidence 9998888777777766666655555543 12222 334445566667778877755766544 4454 55444321
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
..+.+++++.+.+ +||.+.+|..+ .+|+.+.. +.++++..+..+.+.+
T Consensus 317 ----------~~~~~~l~~~~~k-~gi~lm~~~s~----r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 317 ----------RLTAEELCKFLEK-NGILLMGGASR----RIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred ----------cCCHHHHHHHHHH-CCeEEeecccc----ceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 1278899998754 59999998754 48999997 8899999999995443
No 269
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=1.7e-17 Score=168.31 Aligned_cols=214 Identities=11% Similarity=0.102 Sum_probs=150.2
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~ 209 (471)
...|++.++++. | .+..+++++++.++..++.+++++||+|+++...|...... +...|++++.++ +
T Consensus 71 ~~~Le~~lA~l~----g----~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 71 QDVVEQRIAALE----G----GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred HHHHHHHHHHHh----C----CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 345666666654 4 24567777888899999999999999999999888776543 344788888875 2
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
. .|++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++ ++++|+|+++..... ..+ +
T Consensus 142 ~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~-gi~liVD~t~a~~~~----~~p---l-- 203 (436)
T PRK07812 142 P-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEA-GVPLIVDNTIATPYL----IRP---L-- 203 (436)
T ss_pred C-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCccccc----CCc---h--
Confidence 1 2899999999999999999999999999999 89999999999 999999998864111 111 1
Q ss_pred CCCceEEEecCCcccCccchhheeeEcC-HH------------------------------HHHHHH-HHHhcccCCCCh
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGP-KH------------------------------FVAACN-KIQSQFTSGASS 337 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~------------------------------~i~~l~-~~~~~~~~~~~~ 337 (471)
..+-.+++.|++|.+|-.|--+|+++.. .. ++.++. ......+.++++
T Consensus 204 ~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p 283 (436)
T PRK07812 204 EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISP 283 (436)
T ss_pred hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCH
Confidence 1234488899999997666556665542 11 111111 223344555666
Q ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 338 ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 338 ~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
+..+.+..-| +-+....++..++...+.+.|++.|++
T Consensus 284 ~~a~l~~rgl-------~tL~~R~~~~~~nA~~la~~L~~~p~v 320 (436)
T PRK07812 284 FNAFLIAQGL-------ETLSLRIERHVANAQRVAEFLEARDEV 320 (436)
T ss_pred HHHHHHhcCc-------CcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 6543333222 335666677778888889999988765
No 270
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.82 E-value=1.3e-17 Score=166.05 Aligned_cols=213 Identities=19% Similarity=0.234 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~ 210 (471)
..|.+.|++. .| .+.+++++++..|+..++.+++++||.|+++...|.+....++ ..|.++.+++.
T Consensus 58 ~~le~~la~L----e~----g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~-- 127 (386)
T PF01053_consen 58 RALEQRLAAL----EG----GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP-- 127 (386)
T ss_dssp HHHHHHHHHH----HT-----SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST--
T ss_pred HHHHHHHHHh----hc----ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc--
Confidence 3455555554 33 3689999999999999999999999999999999988776554 47999988864
Q ss_pred CCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-eEEEEccCCCccccCCCCccccccCCC
Q 012095 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~-~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
-|++++++++++++++||+.+|.||+..+.+ +++|+++|+++ + +++++|+.+..... .....
T Consensus 128 -----~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~-g~~~~vVDnT~atp~~-----~~pL~--- 190 (386)
T PF01053_consen 128 -----TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEH-GDILVVVDNTFATPYN-----QNPLE--- 190 (386)
T ss_dssp -----TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHT-TT-EEEEECTTTHTTT-----C-GGG---
T ss_pred -----hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHh-CCceEEeeccccceee-----eccCc---
Confidence 2899999999999999999999999999999 99999999999 8 99999999974211 11112
Q ss_pred CCCceEEEecCCcccC-ccchhheeeEcC--HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFA-MTGWRLGYIAGP--KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g-~~G~R~G~v~~~--~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
.+-.|++.|.+|.++ -...=.|.++++ +++.+.++........++++.....+..-|+. +..+.++..+
T Consensus 191 -~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-------l~~R~~~~~~ 262 (386)
T PF01053_consen 191 -LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT-------LPLRMERQNE 262 (386)
T ss_dssp -GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-------HHHHHHHHHH
T ss_pred -CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc-------HHHHHHHHHH
Confidence 234599999999984 222335777765 47888888877777767777766555554443 5556667777
Q ss_pred HHHHHHHHhcCCCCCe
Q 012095 367 RRDFLVKSFGELEGVK 382 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~ 382 (471)
+...+.+.|++.|.++
T Consensus 263 nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 263 NAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHhCCCCC
Confidence 8888999999887664
No 271
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.82 E-value=2.1e-17 Score=167.88 Aligned_cols=338 Identities=15% Similarity=0.136 Sum_probs=209.5
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..| ...++. +|.+.+|+.+++.+..+. ......+.+..+++.+.+..+. ..+.++++++++++..
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~--~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~SGsEA~e 148 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLH--SQELLDPLRALLAKTLAALTPG--KLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCc--ccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHHHH
Confidence 57889999888 455555 788999999988763221 1112245556677766654432 2268999999999999
Q ss_pred HHHHHhcC----CC-CeEEEcCCCCCChHHHHHHcCCEEE----EecCCCCC---CCcCCHHHHHhhhc------cCCcE
Q 012095 170 QAVLAVCS----PG-DEVIIPAPFWVSYPEMARIADATPV----ILPTRISE---NFLLDPKVLESKLT------EKSRL 231 (471)
Q Consensus 170 ~~~~~l~~----~g-d~Vlv~~p~y~~~~~~~~~~G~~~~----~v~~~~~~---~~~ld~e~l~~~l~------~~~~~ 231 (471)
.+++.... .| ..|+..+.+|++....+.....+.. +.|+.+.- .| .|.+.+++.+. ++..+
T Consensus 149 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-GDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-CCHHHHHHHHHHHhcCCCcEEE
Confidence 88886431 24 5788889888877644433322110 11111100 01 26777777663 23445
Q ss_pred EEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-h
Q 012095 232 LILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-W 309 (471)
Q Consensus 232 i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~ 309 (471)
|++...+...|.. .+++.++++.++|++| ++++|.||++..+--.|. ...+....-..| +-+|+|.+| .| +
T Consensus 228 vIvEpv~g~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~-~~a~e~~gv~PD----ivt~gK~lg-~G~~ 300 (442)
T TIGR03372 228 IILEPIQGEGGVILPPEGYLPAVRALCDEF-GALLILDEVQTGMGRTGK-MFACEHEGVQPD----ILCLAKALG-GGVM 300 (442)
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeecccCCCcccc-chhhhhcCCCCC----eeeehhhhc-CCcc
Confidence 5554445556764 5788999999999999 999999999976522222 111111111112 334899998 78 6
Q ss_pred hheeeEcCHHHHHHHHH--HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CC-CCe
Q 012095 310 RLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE-GVK 382 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~--~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~-g~~ 382 (471)
.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.-.. ++ +.+..++.-+++.+.|++ .| .+.
T Consensus 301 Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~-~~----l~~~~~~~G~~l~~~L~~l~~~~~~~i~ 375 (442)
T TIGR03372 301 PIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLE-KN----LPAQAAIKGDFLLDGFQQLAAEYPDLII 375 (442)
T ss_pred cceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHh-cc----HHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 99999999999888742 12335666789999999888874110 11 222333333334333333 33 222
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
-+.. -|.++.+.+.+. .....+++.|+++ ||++.+... ..+.+||.... +++++++++++|.+
T Consensus 376 ~vRG-~Gl~~giel~~~-----------~~~~~i~~~l~~~-Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~ 440 (442)
T TIGR03372 376 EARG-KGLLMAIEFRDN-----------EIGYAFAKELFQQ-NILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred EEec-ceEEEEEEeCCh-----------HHHHHHHHHHHHC-CcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 2223 355566666432 1346788888875 999875321 13678988775 99999999999987
Q ss_pred HH
Q 012095 461 GL 462 (471)
Q Consensus 461 ~l 462 (471)
++
T Consensus 441 ~~ 442 (442)
T TIGR03372 441 AL 442 (442)
T ss_pred hC
Confidence 63
No 272
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.82 E-value=2.4e-17 Score=163.31 Aligned_cols=315 Identities=13% Similarity=0.141 Sum_probs=218.5
Q ss_pred ChHHHHHHHHHHHHc----CCCCCCCCCCCH---HHHHHHHHHHHHHhCCCCCCCcEEEeCC-hHHHHHHHHHHhcCCCC
Q 012095 109 TPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCSPGD 180 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~it~G-~~~al~~~~~~l~~~gd 180 (471)
.|..+++++.+.+.+ +...|....-.+ ++-+.+.+.+++.++.+ +..+|++++| +|++++.++..++.+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 478899999888763 223343333344 66666777777777742 3457888877 99999999999999999
Q ss_pred eEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCC--cCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 181 EVIIPAPFWVSY--PEMARIADATPVILPTRISENF--LLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 181 ~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~--~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
.+++..-+..+. .++++..|+ ++.+..++..+| .+++++++ +++++++|.+++-.+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 888765544433 367888898 777765422212 35666555 3467899999999999999876 56
Q ss_pred HHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH----------
Q 012095 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK---------- 326 (471)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~---------- 326 (471)
++.+ ++++++|.+... +.....+.. ++ +++.|..|.||.+| +|++++++++++++..
T Consensus 151 ~~~~-~~l~iVDavss~----g~~~id~~~----~d--~~~~ssqK~lgP~G--lg~l~~s~~~~~~~~~~~~~~~~~~~ 217 (349)
T TIGR01364 151 PDVK-NAPLVADMSSNI----LSRPIDVSK----FG--LIYAGAQKNIGPAG--LTVVIVRKDLLGRASRITPSMLNYKI 217 (349)
T ss_pred cccC-CCeEEEEccccc----cCccCCHHH----cc--EEEEecccccCCCc--eEEEEECHHHHhhcccCCCCcchHHH
Confidence 6678 899999998875 222222221 23 88888999999777 8999999998876521
Q ss_pred HH--hcccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeC--C--CcceEEeEecCCc
Q 012095 327 IQ--SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLFIDFSTY 399 (471)
Q Consensus 327 ~~--~~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~--p--~~g~~~~~~~~~~ 399 (471)
.. .....+++....++..++|+.- .++ .++.+.++.++..+++++.|++++|+.... + ..+..+.+.+++.
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~ 295 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWL--KEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE 295 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh
Confidence 11 1223467777777777788751 123 488999999999999999999997764331 1 2223345555532
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
....++...+.+ .|+++.+|.. ..+.+|+|+.. +.||++.+++.|++++++
T Consensus 296 -----------~~~~~~~~~~~~-~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 -----------ELEKRFLKEAEE-RGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred -----------hHhHHHHHHHHH-CCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 023456565554 5897777764 34689999987 899999999999987754
No 273
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.81 E-value=3.5e-17 Score=167.41 Aligned_cols=342 Identities=14% Similarity=0.158 Sum_probs=216.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|. ..++. ++.+.+|+.+++.+... + ......+.+..+++.+.+.... ..+.++++++++++..
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~-~-~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGsEAve 155 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPL-H-SQELLDPLRAMLAKTLAALTPG--KLKYSFFCNSGTESVE 155 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcc-c-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCchHHHH
Confidence 578899998884 45554 78899999999875322 1 1122345666677777654432 2368999999999999
Q ss_pred HHHHHhc----CCC-CeEEEcCCCCCChHHHHHHcCCEE-EE---ecCCCC---CCCcCCHHHHHhhhcc------CCcE
Q 012095 170 QAVLAVC----SPG-DEVIIPAPFWVSYPEMARIADATP-VI---LPTRIS---ENFLLDPKVLESKLTE------KSRL 231 (471)
Q Consensus 170 ~~~~~l~----~~g-d~Vlv~~p~y~~~~~~~~~~G~~~-~~---v~~~~~---~~~~ld~e~l~~~l~~------~~~~ 231 (471)
.+++... ++| ..|+....+|++....+....... .. .|..+. -.| .|.+.+++.+.. +..+
T Consensus 156 ~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 156 AALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCCcEEE
Confidence 8888643 123 468888888888765443322111 11 111110 011 267888877742 2345
Q ss_pred EEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-h
Q 012095 232 LILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-W 309 (471)
Q Consensus 232 i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~ 309 (471)
|++...+.-.|. ..|++.++++.++|++| |+++|.||++..+--.|.. ..+....-..| +-+|+|.+| .| +
T Consensus 235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-~a~e~~gv~PD----ivt~gK~lg-gG~~ 307 (459)
T PRK11522 235 VILEPIQGEGGVILPPEGYLTAVRKLCDEF-GALLILDEVQTGMGRTGKM-FACEHENVQPD----ILCLAKALG-GGVM 307 (459)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEeccceecCCccchh-hhhhccCCCCC----EEEechhhh-CCCc
Confidence 555544656676 45788899999999999 9999999999765222221 11111111112 337899998 78 6
Q ss_pred hheeeEcCHHHHHHHHH--HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CCCC-e
Q 012095 310 RLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEGV-K 382 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~--~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g~-~ 382 (471)
.+|.+++.+++++.+.. .....+++.++++.+++.+.|+.-.. + .+.++.+++-+++.+.|++ .|.+ .
T Consensus 308 Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 382 (459)
T PRK11522 308 PIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLE-Q----NLPAQAEQKGDYLLDGFRQLAREYPDLVQ 382 (459)
T ss_pred cceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhc-c----hHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 99999999998887642 22335666789999888888875211 1 2344444555555555544 3322 1
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
-+... |.++.+.+.+. .....+.+.|+++ ||.+.+... ..+.+|+.... +++++++++++|.+
T Consensus 383 ~VrG~-Gl~~giel~~~-----------~~~~~i~~~l~~~-Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l~~ 447 (459)
T PRK11522 383 EARGK-GMLMAIEFVDN-----------EIGYNFASEMFRQ-RVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAARK 447 (459)
T ss_pred eEEec-eeEEEEEecCc-----------hHHHHHHHHHHHC-CeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHHHH
Confidence 12223 45566666431 1345788888875 999876421 23678988775 99999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
+++++.
T Consensus 448 ~l~~~~ 453 (459)
T PRK11522 448 ALAAMR 453 (459)
T ss_pred HHHHHH
Confidence 998765
No 274
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.81 E-value=4.3e-17 Score=163.13 Aligned_cols=305 Identities=18% Similarity=0.261 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCC
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFW 189 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y 189 (471)
++..+++.+.+..+.... ...-..+|.+.+++++ ..++++.+++++.||.+++.++ +++||+|+++..+|
T Consensus 5 ~e~~~~v~~~l~s~~~~~-~g~~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~ 75 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLST-YGPYVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTF 75 (363)
T ss_dssp HHHHHHHHHHHHHTCCSS-SSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-
T ss_pred HHHHHHHHHHHHhCCccC-CCHHHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcc
Confidence 456677788887764332 1234577888888886 3568999999999999999987 57999999999999
Q ss_pred CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 190 VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 190 ~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
..+...+...|++++++++++ +++.+|++.+++++++++++|++.+. -|...+ +.+|.++|++| |++||+|.
T Consensus 76 ~~~~~ai~~~G~~pv~~Di~~-~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d---~~~i~~~~~~~-~i~lIeD~ 147 (363)
T PF01041_consen 76 PATASAILWAGAEPVFVDIDP-ETLNIDPEALEKAITPKTKAILVVHL---FGNPAD---MDAIRAIARKH-GIPLIEDA 147 (363)
T ss_dssp THHHHHHHHTT-EEEEE-BET-TTSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHT-T-EEEEE-
T ss_pred hHHHHHHHHhccEEEEEeccC-CcCCcCHHHHHHHhccCccEEEEecC---CCCccc---HHHHHHHHHHc-CCcEEEcc
Confidence 999999999999999999986 46889999999999999999996544 577776 99999999999 99999999
Q ss_pred CCCccc-cCCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEcC-HHHHHHHHHHHhcc--------------
Q 012095 270 IYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQF-------------- 331 (471)
Q Consensus 270 ~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~-------------- 331 (471)
++.... +.+. ....+ ..+.+.|| +|.+. +| -.|+++.+ +++.++++.++...
T Consensus 148 a~a~g~~~~g~---~~G~~-----gd~~~fSf~~~K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 217 (363)
T PF01041_consen 148 AQAFGARYKGR---PVGSF-----GDIAIFSFHPTKIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELP 217 (363)
T ss_dssp TTTTT-EETTE---ETTSS-----SSEEEEESSTTSSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSS
T ss_pred ccccCceeCCE---eccCC-----CCceEecCCCCCCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCcccccccccccc
Confidence 998743 2221 11111 13677787 58884 22 34888875 56777777654321
Q ss_pred ---cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCc----ce-EEeEecCCccCC
Q 012095 332 ---TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQG----AF-YLFIDFSTYYGS 402 (471)
Q Consensus 332 ---~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~----g~-~~~~~~~~~~~~ 402 (471)
++.++.+..+.+...|+. +++..+.-+++.+++.+.|.+++++... .+.+ .+ .+.+.+++...
T Consensus 218 ~g~n~rm~~~~AAigl~QL~~-------L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~- 289 (363)
T PF01041_consen 218 PGYNFRMSELQAAIGLAQLKR-------LDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL- 289 (363)
T ss_dssp S--B-B-BHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC-
T ss_pred CCcccccHHHHHHHHHHHHHH-------hhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc-
Confidence 233455554444444443 5666666677888888999998876442 2221 22 23444543200
Q ss_pred cccCCCCCCCHHHHHHHHHHcCCEEEECCCC-C-C------C-----C-----------CcEEEEeec--CHHHHHHHHH
Q 012095 403 EAEGFGKIENSESLCRYLLDKAQVALVPGDA-F-G------D-----D-----------TCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 403 ~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~-f-~------~-----~-----------~~iRis~~~--~~e~i~~~~~ 456 (471)
.+-.++.+.|.++ ||.+.+... . . . . ..+-+-+.. ++++++..++
T Consensus 290 --------~~rd~l~~~L~~~-GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~ 360 (363)
T PF01041_consen 290 --------ADRDELVEALRAR-GIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAE 360 (363)
T ss_dssp --------STHHHHHHHHHHT-TBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHH
T ss_pred --------chHHHHHHHHHHC-CCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhh
Confidence 1467888888776 999888652 1 0 0 0 134555444 7788888887
Q ss_pred HHH
Q 012095 457 RIK 459 (471)
Q Consensus 457 ~l~ 459 (471)
.|+
T Consensus 361 ~ir 363 (363)
T PF01041_consen 361 AIR 363 (363)
T ss_dssp HHH
T ss_pred ccC
Confidence 764
No 275
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=3.6e-17 Score=163.14 Aligned_cols=214 Identities=12% Similarity=0.123 Sum_probs=162.0
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~ 209 (471)
...|.+.|+++- ..+..++++++++|+..++.+++++||+|++++..|.+....+ +..|.++..++.
T Consensus 64 ~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~- 134 (395)
T PRK08114 64 HFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP- 134 (395)
T ss_pred HHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 445666666642 3467888888999999999999999999999998887776554 567999988874
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC-CCeEEEEccCCCccccCCCCccccccCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH-PRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
.|.+.+++++++++|+|++.+|+||+|.+.+ +++|+++|+++ +++++++|.++.--. . ....
T Consensus 135 ------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~----~-~~pl--- 197 (395)
T PRK08114 135 ------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGV----L-FKAL--- 197 (395)
T ss_pred ------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCcccc----c-cCHH---
Confidence 3789999999999999999999999999999 99999999997 249999999996411 1 1111
Q ss_pred CCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
..+-.+++.|.+|.++-+| .-.|.++.++++.+.+.........+.+++....+..-| +-+.-+.++..++
T Consensus 198 -~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl-------~TL~lR~~~~~~n 269 (395)
T PRK08114 198 -DFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGL-------RTLGVRLRQHEES 269 (395)
T ss_pred -HcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCC-------CcHHHHHHHHHHH
Confidence 1345599999999885343 567888888887777776665566667777654433333 3355666777788
Q ss_pred HHHHHHHhcCCCCC
Q 012095 368 RDFLVKSFGELEGV 381 (471)
Q Consensus 368 r~~l~~~L~~~~g~ 381 (471)
...+.+.|++.|.+
T Consensus 270 a~~va~~L~~hp~V 283 (395)
T PRK08114 270 SLKVAEWLAEHPEV 283 (395)
T ss_pred HHHHHHHHHcCCCE
Confidence 88888999887654
No 276
>PRK07046 aminotransferase; Validated
Probab=99.81 E-value=6.4e-17 Score=165.38 Aligned_cols=347 Identities=17% Similarity=0.131 Sum_probs=209.6
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|..+||+..|. ..++. +|.+.+++.+++.++.....+ .+....+++.+.+..+ .+.+.++++++++..
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~----~~~~~~lAe~l~~~~~----~~~v~F~nSGtEA~e 144 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLP----SEDAAWVGEELARRFG----LPYWQVATTATDANR 144 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCC----CHHHHHHHHHHHHHhC----CCEEEEECCHHHHHH
Confidence 678899998776 33443 689999999999875432212 3555566666655443 468999999999999
Q ss_pred HHHHHhcC-CC-CeEEEcCCCCCChHHHHHH--cCCEEE------EecC--CC---CCCCcCCHHHHHhhhcc-CCcEEE
Q 012095 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMARI--ADATPV------ILPT--RI---SENFLLDPKVLESKLTE-KSRLLI 233 (471)
Q Consensus 170 ~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~--~G~~~~------~v~~--~~---~~~~~ld~e~l~~~l~~-~~~~i~ 233 (471)
.+++.... .| +.|+..+.+|+++...... .+.+.. .++. .. .-.|+ |++.+++.+.. +..+|+
T Consensus 145 ~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~vAavi 223 (453)
T PRK07046 145 FVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-DLAALEAALADGDVAAVL 223 (453)
T ss_pred HHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-CHHHHHHHhCCCCeEEEE
Confidence 88886531 33 6788888889887432211 111100 0000 00 00122 88999998853 344555
Q ss_pred EcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhe
Q 012095 234 LCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG 312 (471)
Q Consensus 234 i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G 312 (471)
+.-.+.-.| ...+++.++++.++|++| |+++|.||+.. +..+-.+......+.+ | +-+|+|.+| .|+.+|
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~-g~llI~DEV~t-fr~g~Gg~~~~~gv~P--D----i~t~gK~lg-gG~Pi~ 294 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRY-GTLLVIDETHT-ISSGPGGYTRAHGLEP--D----FLVVGKPIA-GGVPCA 294 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEcccc-CccCCcchhHHhCCCc--c----ceeehhhhc-CCCcce
Confidence 533233344 556778999999999999 99999999987 3322111111122221 2 345899998 899999
Q ss_pred eeEcCHHHHHHHHHH---------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 313 YIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 313 ~v~~~~~~i~~l~~~---------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
.+++++++++.+... ....+++.++++.+++.+.|+.-.. ++.+++..+.-+..++.+.+.+.+. ++.+
T Consensus 295 av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~-~~~~ 372 (453)
T PRK07046 295 VYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMT-EAAYAHMLALAARLAAGLRAVIARH-GLPW 372 (453)
T ss_pred eeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHhC-CCCe
Confidence 999999999887632 1223667899999999888874211 2334444333333444444444444 3322
Q ss_pred -eCCCcceEEeEec-CCccC-CcccCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHH
Q 012095 384 -SEPQGAFYLFIDF-STYYG-SEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIK 459 (471)
Q Consensus 384 -~~p~~g~~~~~~~-~~~~~-~~~~~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~ 459 (471)
+...|.++ .+.+ ++... ....... ...-...+...|+++ ||++.|.. +.++++...++++|+++++++.
T Consensus 373 ~v~g~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gv~~~~~~-----~~~~~~p~~t~~did~~~~~~~ 445 (453)
T PRK07046 373 HVTRVGARV-EFQFAPTPPRNGAEAAAALDPELEAALHLYLLNR-GVLITPFH-----NMMLVCPATTAADVDRLVAAFD 445 (453)
T ss_pred EEEEeCcEE-EEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHC-CCEEeccc-----CcEEEeCCCCHHHHHHHHHHHH
Confidence 22334442 2332 11100 0000000 000123566677775 99988732 4678888889999999999999
Q ss_pred HHHHhhC
Q 012095 460 KGLLTLR 466 (471)
Q Consensus 460 ~~l~~~~ 466 (471)
++++++.
T Consensus 446 ~~l~~~~ 452 (453)
T PRK07046 446 ACLGELL 452 (453)
T ss_pred HHHHHHh
Confidence 9998753
No 277
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.81 E-value=1.2e-17 Score=162.33 Aligned_cols=204 Identities=18% Similarity=0.215 Sum_probs=159.7
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCC-CC--CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG----FTR-YT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~----~~~-Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
..|.+.+.|..+.-. +.++.|.+++...+... ... |+ ...+..+-|+.+|++++ .++.+|++|+|+
T Consensus 39 ~~~~~~vyld~~at~-p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklIn------Ad~~dIiFts~A 111 (428)
T KOG1549|consen 39 HHGTRPVYLDNQATG-PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLIN------ADPSDIVFTSGA 111 (428)
T ss_pred cCCCccEEEecCcCC-CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhC------CCCCcEEEeCCc
Confidence 345577888877633 23677888887766542 222 32 22346778888888875 477789999999
Q ss_pred HHHHHHHHHHhc-CCCC----eEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 165 KQSILQAVLAVC-SPGD----EVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 165 ~~al~~~~~~l~-~~gd----~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
|++++++++.+. ..+| .|++..-.|++.... .+..|++++++|+. +++..|.+.+++.++++|+++.|..
T Consensus 112 TEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~I~~ 189 (428)
T KOG1549|consen 112 TESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVSIMH 189 (428)
T ss_pred hHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEEEEe
Confidence 999999999874 3566 899988888877654 45679999999997 3456899999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
.+|.+|+.+| +++|+.+|+++ ++.+++|.+++- |.-...+..+. -.+...|..|.||.+| +|++++
T Consensus 190 Vnn~~gv~~P---v~EI~~icr~~-~v~v~~DaAQav----G~i~vDV~eln----~D~~s~s~HK~ygp~~--iGaLYv 255 (428)
T KOG1549|consen 190 VNNEIGVLQP---VKEIVKICREE-GVQVHVDAAQAV----GKIPVDVQELN----ADFLSISAHKIYGPPG--IGALYV 255 (428)
T ss_pred cccCcccccc---HHHHHHHhCcC-CcEEEeehhhhc----CCccccHHHcC----chheeeecccccCCCc--ceEEEE
Confidence 9999999999 99999999998 999999999975 43334444443 3367788999999888 999998
Q ss_pred CH
Q 012095 317 PK 318 (471)
Q Consensus 317 ~~ 318 (471)
.+
T Consensus 256 r~ 257 (428)
T KOG1549|consen 256 RR 257 (428)
T ss_pred cc
Confidence 75
No 278
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.80 E-value=6.7e-19 Score=165.38 Aligned_cols=324 Identities=21% Similarity=0.295 Sum_probs=190.5
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHH-cCC--CCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 98 IRLAAGEPDFDTPVLIAEAGINAIR-EGF--TRYTP-----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~~~~-~~~--~~Y~~-----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
+|+..|+|.+--|-....+...++- .++ ..|-. ..-.++|.+.|.++.....+...+...|++++|+++.++
T Consensus 1 ~d~d~GDP~~~E~yW~~~~~~~avvi~gw~rMSY~~~~~~~~f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~ 80 (363)
T PF04864_consen 1 ADADSGDPTFFEPYWRRHGDSSAVVIPGWHRMSYFSDSSNGWFISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFN 80 (363)
T ss_dssp EEESS---GGGHHHHCCTHHHH-EEE-TTTT-SSSS-TTSSTTS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHH
T ss_pred CCcCCCCchhhHHHHHhcCcceeEEEeccccceeEEecCCceeccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHH
Confidence 4677788765323222222222211 232 33433 123578888888888766555455679999999999999
Q ss_pred HHHHHhcCC----C--CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE-EEcCCCCCcc
Q 012095 170 QAVLAVCSP----G--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL-ILCSPSNPTG 242 (471)
Q Consensus 170 ~~~~~l~~~----g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i-~i~~p~NPtG 242 (471)
.++.+|... + -.|+...|+|+.|...............- |...+.+. +.....| ++++||||.|
T Consensus 81 AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~G--------da~~~~~~-~~~~~~IElVTSPNNPDG 151 (363)
T PF04864_consen 81 AALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAG--------DASNFKNS-DNPSPYIELVTSPNNPDG 151 (363)
T ss_dssp HHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEE--------ECCCGTT--S-CCGEEEEEESS-TTT-
T ss_pred HHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccccc--------cHHhhccC-CCCCCeEEEEeCCCCCcc
Confidence 999998532 1 36999999999999876544322222221 22222211 1123344 6899999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHH
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFV 321 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i 321 (471)
..-. . +++.- +..+|.|-+|+.=.|.+ +....+..|.+.|+||.-|-+|.|+||++.. +++.
T Consensus 152 ~lr~-----~---V~~g~-~~k~I~D~AYYWPhyTp--------I~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va 214 (363)
T PF04864_consen 152 QLRE-----A---VLNGS-SGKVIHDLAYYWPHYTP--------ITAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVA 214 (363)
T ss_dssp -------------SSTTT-EEEEEEE-TT-STTTS-----------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHH
T ss_pred cccc-----h---hcCCC-Ccceeeeeeeecccccc--------cCCCCCCceEEEEEecccCccccccceeeecCHHHH
Confidence 8533 2 23343 67789999998622221 1112355588999999999999999998875 5688
Q ss_pred HHHHHHHhcccCCCChHHHHHHHHHHhc---cCCC----hHHHHHHHHHHHHHHHHHHHHhcCCCCCe------------
Q 012095 322 AACNKIQSQFTSGASSISQKAGVAALGL---GYAG----GEVVSKMVKAFRERRDFLVKSFGELEGVK------------ 382 (471)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa~~~L~~---~~~~----~~~~~~~~~~~~~~r~~l~~~L~~~~g~~------------ 382 (471)
+++.......+.+.+.=+|.=+++.|+. +... .+...--++.+++|-+.|.+.+..-.-+.
T Consensus 215 ~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff 294 (363)
T PF04864_consen 215 KKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFF 294 (363)
T ss_dssp HHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTT
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhcccc
Confidence 8998888888889999999888887763 1110 12344455666777777777777631121
Q ss_pred --eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC-CcEEEEeecCHHHHHHHHHHHH
Q 012095 383 --MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD-TCIRISYAASLTTLQAAVERIK 459 (471)
Q Consensus 383 --~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~-~~iRis~~~~~e~i~~~~~~l~ 459 (471)
+..|..+ |.|+++... ..+=|..+++++||..+.|..||.+ .|+|||+-.++++++.+++||.
T Consensus 295 ~~~~~psPa-fAWlkCe~e-------------ed~DC~~~l~~~~I~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~ 360 (363)
T PF04864_consen 295 KRVREPSPA-FAWLKCERE-------------EDEDCYAVLREAKIITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLS 360 (363)
T ss_dssp TCEEE---S-EEEEEESSC-------------GGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHH
T ss_pred ccccCCCCC-eEEEecCCc-------------ccccHHHHHHhCCcccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHH
Confidence 1233444 599999753 1122445566789999999999975 7999999999999999999997
Q ss_pred HH
Q 012095 460 KG 461 (471)
Q Consensus 460 ~~ 461 (471)
+.
T Consensus 361 ~l 362 (363)
T PF04864_consen 361 KL 362 (363)
T ss_dssp CC
T ss_pred hh
Confidence 53
No 279
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.80 E-value=3e-17 Score=179.31 Aligned_cols=339 Identities=15% Similarity=0.124 Sum_probs=214.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCCCCC----CCHHHHHHHHHHHHHHhCCCCCC-C-cEEEeCChHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTPNA----GTLELRSAICHKLKEENGLSYTP-D-QILVSNGAKQ 166 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~~-~-~i~it~G~~~ 166 (471)
++.|..+.-.+.++..+.+++.+...+. ...|.... -..+.|+.++++ .|. ++ + +|++|+|+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~----lga--~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEY----FNA--PPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHH----hCC--CccceEEEEeCChHH
Confidence 6888887766555666666665554321 11111111 133455555555 453 34 3 6899999999
Q ss_pred HHHHHHHHh-cCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCC------CCCcCCH--HHHHhhh---------
Q 012095 167 SILQAVLAV-CSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRIS------ENFLLDP--KVLESKL--------- 225 (471)
Q Consensus 167 al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~------~~~~ld~--e~l~~~l--------- 225 (471)
++..++..+ .++||+|++..-.|++.... ++..|++++.++++.+ ....+++ +.+++.+
T Consensus 109 alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~ 188 (805)
T PLN02724 109 ALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKRED 188 (805)
T ss_pred HHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccc
Confidence 999998887 67899999987777765543 3456999999987621 1112333 5666653
Q ss_pred -ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC----CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecC
Q 012095 226 -TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH----PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (471)
Q Consensus 226 -~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~----~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (471)
.++++++.+++.+|-||..+|.+.++++.+.++.+ .++++++|.++.. +.....+.. .+..+++.|+
T Consensus 189 ~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~----~~~Dfl~~S~ 260 (805)
T PLN02724 189 DGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSR----YPADFVVVSF 260 (805)
T ss_pred cCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhh----cCCCEEEEec
Confidence 14568888999999999999955433333322111 1367999998864 332233332 2445889999
Q ss_pred CcccC-ccchhheeeEcCHHHHHHHHHHH------------------------hcccCCCChHHHHHHHHHHhccCCChH
Q 012095 301 SKAFA-MTGWRLGYIAGPKHFVAACNKIQ------------------------SQFTSGASSISQKAGVAALGLGYAGGE 355 (471)
Q Consensus 301 SK~~g-~~G~R~G~v~~~~~~i~~l~~~~------------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~ 355 (471)
.|.+| -.| +|++++++++.+.+.... +.-..+++..+..++.++++. ..+
T Consensus 261 HK~~GgP~G--~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~---l~~ 335 (805)
T PLN02724 261 YKIFGYPTG--LGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKL---LNR 335 (805)
T ss_pred ceeccCCCC--ceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHH---HHH
Confidence 99997 334 899999988776654210 011123455555556666654 122
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcCCC------CCeeeCCC---------cceEEeEecCCccCCcccCCCCCCCHHHHHHH
Q 012095 356 -VVSKMVKAFRERRDFLVKSFGELE------GVKMSEPQ---------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRY 419 (471)
Q Consensus 356 -~~~~~~~~~~~~r~~l~~~L~~~~------g~~~~~p~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 419 (471)
.++.+.++.++.++++.+.|.+++ ++.++.+. ++. +.+.+...-+ .. -....+.+
T Consensus 336 ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~i-vsFnv~~~~~-------~~-v~~~~v~~ 406 (805)
T PLN02724 336 LTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPI-VTFNLKRADG-------SW-VGHREVEK 406 (805)
T ss_pred hChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCE-EEEEEEcCCC-------CE-eCHHHHHH
Confidence 356777888889999999998875 46676542 344 3334432200 00 11233455
Q ss_pred HHHcCCEEEECCCCCCC-----------------------------------CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 420 LLDKAQVALVPGDAFGD-----------------------------------DTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 420 Ll~~~gV~v~pg~~f~~-----------------------------------~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
|+.++||.++.|..+.. .+.+|+|++. +.+|++++++.|++.+
T Consensus 407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 67777999999876531 2779999997 8999999999999866
Q ss_pred H
Q 012095 463 L 463 (471)
Q Consensus 463 ~ 463 (471)
.
T Consensus 487 ~ 487 (805)
T PLN02724 487 V 487 (805)
T ss_pred h
Confidence 3
No 280
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.80 E-value=4.1e-17 Score=167.10 Aligned_cols=346 Identities=13% Similarity=0.147 Sum_probs=208.8
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|.. .++. ++.+.+++.+++.+.. .|+. ..++...+++.+.+..+ ..+.+.++++++++..
T Consensus 97 dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~-~~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA~e 169 (474)
T PLN02482 97 DGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGT-SFGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTEACM 169 (474)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHhhCC-CCCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHHHHH
Confidence 5788999987763 3444 7899999999998754 3322 23566667777765543 2479999999999999
Q ss_pred HHHHHhcC-CC-CeEEEcCCCCCChHHHHH-Hc--CCEEE------EecCCC-C----CCCcCCHHHHHhhhcc---CCc
Q 012095 170 QAVLAVCS-PG-DEVIIPAPFWVSYPEMAR-IA--DATPV------ILPTRI-S----ENFLLDPKVLESKLTE---KSR 230 (471)
Q Consensus 170 ~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~-~~--G~~~~------~v~~~~-~----~~~~ld~e~l~~~l~~---~~~ 230 (471)
.+++.... .| +.|+....+|+++...+. .. |.... .+|... . -.|+ |++.+++.+.. +..
T Consensus 170 ~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~~~iA 248 (474)
T PLN02482 170 GVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-DLEAVKKLFEANKGEIA 248 (474)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-ChHHHHHHHHhCCCceE
Confidence 88886531 33 678888888888653211 11 10000 001000 0 0111 78889888853 344
Q ss_pred EEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccch
Q 012095 231 LLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
+|++.......|.+. +++.+++|.++|++| |+++|.||++..+..+.........+. .| +.+|+|.+| .|+
T Consensus 249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~-g~lLI~DEV~tGfR~g~~ga~~~~gv~--PD----i~t~gK~lg-gG~ 320 (474)
T PLN02482 249 AVILEPVVGNSGFIVPKKEFLEGLREITKEN-GALLVFDEVMTGFRIAYGGAQEYFGIT--PD----LTTLGKVIG-GGL 320 (474)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCeecCcchHhHHhCCC--CC----EEEecchhh-CCC
Confidence 555544455577655 578999999999999 999999999987633211111111221 12 457899998 899
Q ss_pred hheeeEcCHHHHHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC---CCCee
Q 012095 310 RLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL---EGVKM 383 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~ 383 (471)
.+|.+++++++++.+... ....+++.++++..++.+.|+.-.. + +..++..++-+++.+.|+++ -|+.+
T Consensus 321 Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~-~----~~~~~~~~~g~~l~~~L~~l~~~~g~~~ 395 (474)
T PLN02482 321 PVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ-P----GTYEYLDKITKKLIQGILEAGKKAGHEM 395 (474)
T ss_pred ceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc-c----CHHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999999999987531 2234556788888888888875211 2 23334444444444444432 13333
Q ss_pred e-CCCcceEE-eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 384 S-EPQGAFYL-FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~-~p~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
. ...++++- .+.-+..................+.+.|+++ ||++.|... . .+ -+++..++++|+++++++.++
T Consensus 396 ~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-Gv~~~~~~~-~--~~-~psl~ht~~dId~~l~al~~~ 470 (474)
T PLN02482 396 CGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEE-GVYLAPSQF-E--AG-FTSLAHTEEDIDFTIAAAERV 470 (474)
T ss_pred EEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHC-CeEEeccCC-C--CC-cCCCCCCHHHHHHHHHHHHHH
Confidence 2 23344442 2221110000000000000134677778876 999988431 1 11 167777999999999999999
Q ss_pred HHh
Q 012095 462 LLT 464 (471)
Q Consensus 462 l~~ 464 (471)
+++
T Consensus 471 l~~ 473 (474)
T PLN02482 471 LAR 473 (474)
T ss_pred HHh
Confidence 875
No 281
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=2.9e-17 Score=165.14 Aligned_cols=317 Identities=12% Similarity=0.045 Sum_probs=206.0
Q ss_pred ChHH-HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeC-ChHHHHHHHHHHhcCC-CCeEEEc
Q 012095 109 TPVL-IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAVCSP-GDEVIIP 185 (471)
Q Consensus 109 ~p~~-v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~-G~~~al~~~~~~l~~~-gd~Vlv~ 185 (471)
+|+. +.+++...... ..+.++ -..++-+...+.+.+.+|.+ ++++|++++ |+|.+++.++..++++ ++.|+.
T Consensus 23 ~~~~~v~~a~~~~~~~-~~hr~~--~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~- 97 (378)
T PRK03080 23 KRPGWQLEALADALLG-RSHRQK--PVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA- 97 (378)
T ss_pred CChHHHHHHHHhhhcc-cCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence 3455 88888754321 112222 22445555555666666742 345898886 8999999999999875 455555
Q ss_pred CCCCCChHH--HHHHcCC-EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 186 APFWVSYPE--MARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 186 ~p~y~~~~~--~~~~~G~-~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
.-.|..-.. +.+..|+ +++.++.+. +..+|+++++. ++.|.+++-.|.||..++ +++|++ +++ +
T Consensus 98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~~-----~~~V~~~h~~t~tG~~~p---i~~I~~--~~~-g 164 (378)
T PRK03080 98 WESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVDF-----DRDVVFTWNGTTTGVRVP---VARWIG--ADR-E 164 (378)
T ss_pred eCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcCC-----CCCEEEEecCCccceecc---chhhcc--ccC-C
Confidence 445544332 2356788 888888753 34577776432 567888999999999999 777777 778 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc-cchhheeeEcCHHHHHHHHHHH-------------
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQ------------- 328 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~~~~~i~~l~~~~------------- 328 (471)
+++++|.+.+.. .....+.. -.+++.|..|.++. +| +|+++.+++.++++....
T Consensus 165 ~~~vVDa~qs~G----~~pidv~~------iD~~~~s~~K~l~~P~G--~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~ 232 (378)
T PRK03080 165 GLTICDATSAAF----ALPLDWSK------LDVYTFSWQKVLGGEGG--HGMAILSPRAVERLESYTPARPIPKFFRLTK 232 (378)
T ss_pred CeEEEecccccc----cCCCCHHH------CcEEEEehhhhCCCCCc--eEEEEECHHHHHhhhcccCCCCCchhheecc
Confidence 999999988752 22222222 23889999999853 45 899999998887764310
Q ss_pred ---------hccc-CCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeC--C--CcceEEe
Q 012095 329 ---------SQFT-SGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSE--P--QGAFYLF 393 (471)
Q Consensus 329 ---------~~~~-~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~--p--~~g~~~~ 393 (471)
...+ ..++.....++.++|+.- .+. .++.+.++.+++.+++++.|++++++.+.. + .++..+.
T Consensus 233 ~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~ 310 (378)
T PRK03080 233 GGKAIENSFKGQTINTPSMLTVEDYLDQLDWA--NSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVT 310 (378)
T ss_pred chHHhhhhhcCCcccCchHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEE
Confidence 0001 123444444445555541 122 367788888999999999999886665542 2 2323345
Q ss_pred EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+.+++. . . ....++..+|+++ |+.+..|......+.+|+|+.. ++++++.+++.|++++++++.
T Consensus 311 ~~~~~~-~---~-----~~~~~~~~~l~~~-~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 311 LDFVDA-Q---A-----AVDAAAVAKLLRE-NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred EEcCCc-h---H-----HHHHHHHHHHHHc-CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 566540 0 0 0234567777776 7888776432235789999886 889999999999999987764
No 282
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.80 E-value=3.6e-17 Score=163.10 Aligned_cols=314 Identities=14% Similarity=0.156 Sum_probs=203.7
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCCCCCH---HHHHHHHHHHHHHhCCCCCCCcEEEeCC-hHHHHHHHHHHhcC--
Q 012095 108 DTPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNG-AKQSILQAVLAVCS-- 177 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~it~G-~~~al~~~~~~l~~-- 177 (471)
..|+.|++++.+.+.+ +...|....-.. ++-+.+.+.+.+.+|.+ ++++|++|+| +|++++.++..++.
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~~~~~~~l~~~~ 87 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQFAAVPLNLLGDK 87 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCC
Confidence 4588999999887743 112222221112 33444444455555632 5678999988 99999999999987
Q ss_pred -CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCC-HHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 178 -PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 178 -~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld-~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
+||.|++ .+......+.++..|++++.++.+.+.++ .+ ++..+..+++++++|.+++-.|.||..++ +
T Consensus 88 ~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--------~ 157 (355)
T cd00611 88 GTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKY-TKIPDVETWDLAPDAAYVHYCSNETIHGVEFD--------E 157 (355)
T ss_pred CeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCC-CCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--------e
Confidence 5555554 22222223477888999999987543222 14 33333446778999999999999999754 3
Q ss_pred HHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH-------H
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-------Q 328 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~-------~ 328 (471)
+++.| ++++++|.+... |.....+.. .+ +.+.|..|.||.+| +|++++++++++++... .
T Consensus 158 i~~~~-g~~~~VDa~qs~----g~~~idv~~----~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T cd00611 158 VPDTG-GVPLVADMSSNI----LSRPIDVSK----FG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKARKITPSMLNYK 224 (355)
T ss_pred ecccC-CCeEEEEccccc----cCCCCCHHH----hC--EEEeecccccCCCc--eEEEEECHHHHhhcccCCCCcccHH
Confidence 44558 999999999875 222222222 12 45566799998776 89999999888764321 0
Q ss_pred -----hcccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCe-ee-CC--CcceEEeEecCC
Q 012095 329 -----SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVK-MS-EP--QGAFYLFIDFST 398 (471)
Q Consensus 329 -----~~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~-~p--~~g~~~~~~~~~ 398 (471)
.....+++....+++.++|+.- .+. .++.+.+++++.++++++.|++++|+. .. .+ ..+..+.+.+++
T Consensus 225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l--~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~ 302 (355)
T cd00611 225 THADNNSLYNTPPTFAIYMMGLVLKWL--KEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGK 302 (355)
T ss_pred HHHhcCCCCCCChHHHHHHHHHHHHHH--HHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCC
Confidence 1112356666777777777741 123 378889999999999999999998862 21 11 222334555543
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
. ....++...+.+ .|+...+|.. ..+.||+|+.. +++|++++++.|+++
T Consensus 303 ~-----------~l~~~~~~~~~r-~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 303 E-----------ELEKEFLKEAEA-AGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred h-----------hhhHHHHHHHHH-CCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 1 022445455544 5887666653 34789999987 999999999998874
No 283
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.80 E-value=1e-16 Score=162.21 Aligned_cols=334 Identities=14% Similarity=0.085 Sum_probs=222.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEE--eCChHHHHHHHHHHhc--------CC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILV--SNGAKQSILQAVLAVC--------SP 178 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~i--t~G~~~al~~~~~~l~--------~~ 178 (471)
.+.+.+.+...+.....++.......++.+.+.+++.+.+|.+- + +++.. |+|+|+++..++.+.. ..
T Consensus 54 ~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~-~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 54 EPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPA-KDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC-CCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678888887765433433334456888888899998888531 2 45544 8999999988876542 11
Q ss_pred C-----CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 179 G-----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 179 g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
| -.|++++-.|+++...++..|.+++.+|+++ +++.+|+++|++++++++.+|++...+|.||.+.| +++|
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~~I 208 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VKAL 208 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HHHH
Confidence 2 3689999999999999999999999999975 44679999999999999998889999999999999 8889
Q ss_pred HHHHHhCC-----CeEEEEccCCCcccc---CCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHH--HHH
Q 012095 254 ARIVAKHP-----RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKH--FVA 322 (471)
Q Consensus 254 ~~l~~~~~-----~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~--~i~ 322 (471)
+++|++++ ++++.+|.+|+.+.. .+.....+. . .+-..+.-|.+|.+ +.. .+|+++..+. +.+
T Consensus 209 ~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~---~~~DSis~s~HK~~~~P~--g~G~l~~r~~~~l~~ 282 (431)
T TIGR01788 209 NDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-L---PRVKSINVSGHKYGLVYP--GVGWVIWRDEEALPE 282 (431)
T ss_pred HHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-C---CCceEEEECchhccCCCC--CcEEEEEeChHHcch
Confidence 99998872 699999999995431 122111111 1 23335677889986 434 4898887553 323
Q ss_pred HHHHHHhc-------ccCCCChHH-H-HHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC--CcceE
Q 012095 323 ACNKIQSQ-------FTSGASSIS-Q-KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFY 391 (471)
Q Consensus 323 ~l~~~~~~-------~~~~~~~~~-q-~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p--~~g~~ 391 (471)
.+.....+ .+...+... . ......|.. +....++++.++..++.+++.+.|++.+++++..| ..+.
T Consensus 283 ~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~--lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~i- 359 (431)
T TIGR01788 283 ELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLR--LGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPL- 359 (431)
T ss_pred hheecccccCCCCCCcceecCchHHHHHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceE-
Confidence 22110000 011111111 1 111222221 13466788888889999999999999988988754 4554
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC---CCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA---FGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~---f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+.+++... + . ...+..++.+.|.++ |+.+..-.. ....-++|+++.. +.+.++++++.|+.++.++
T Consensus 360 V~Fr~~~~-~--~----~~~~~~~l~~~L~~~-G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 360 VAFKLKDD-A--D----PGYTLYDLSHRLRER-GWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred EEEEeCCC-C--C----CCcCHHHHHHHHHHC-CCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 44555421 0 0 002567888887665 876432211 1112368999864 7889999999999988764
No 284
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.80 E-value=1e-16 Score=159.59 Aligned_cols=350 Identities=14% Similarity=0.140 Sum_probs=223.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+.+|||..|. ..++. +|.+++|+.+++..-. +.+.. ...+-...+++.+.+....+ ..+.++++++++++.
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~--~~~e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~ 130 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRD--LYYEPYVELAEKLTALAPGS-GLKKVFFGNSGAEAV 130 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCc--ccchhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHH
Confidence 688999999965 44444 7999999999887622 22211 22255566666665543321 356899999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHH-HHcC-------------CEEEEecCCCC--CCCcC--------CHHHHH
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMA-RIAD-------------ATPVILPTRIS--ENFLL--------DPKVLE 222 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~-~~~G-------------~~~~~v~~~~~--~~~~l--------d~e~l~ 222 (471)
+.+++... ..+..|+...-+|++-...+ .+.| ..++.+|.... ..|.. ..+.++
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHH
Confidence 99988652 23367888888887654332 2211 12444554321 11211 234455
Q ss_pred hhhc------cCCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceE
Q 012095 223 SKLT------EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (471)
Q Consensus 223 ~~l~------~~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 295 (471)
..+. .++.++++...+.-.| .+.|++.++++.++|++| |+++|.||++.++--.|. ...+... +-.-
T Consensus 211 ~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~-gillI~DEVQtG~GRTG~-~fa~E~~----gv~P 284 (447)
T COG0160 211 RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH-GILLIADEVQTGFGRTGK-MFAFEHF----GVEP 284 (447)
T ss_pred HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccc-chhhhhc----CCCC
Confidence 5342 1455666666677777 577888899999999999 999999999998755542 2222222 2122
Q ss_pred EEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
-+-++||.+| .|+.+|.+++.+++.+ ...-....+++.|+++.+++.+.|+.- +-+.+.++.++.-+++.+.|
T Consensus 285 Divt~aK~ig-~G~Pl~avv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vi-----e~e~L~~~a~~~G~~l~~~L 357 (447)
T COG0160 285 DIVTLAKSLG-GGLPLSAVVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVI-----EEENLLERAAELGEYLRDRL 357 (447)
T ss_pred CEEEeccccc-CCCceeEEeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHH-----HHccHHHHHHHHHHHHHHHH
Confidence 2556899999 6999999999999998 443344456889999999999999841 11244444444455555555
Q ss_pred cCC----CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHH
Q 012095 376 GEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLT 449 (471)
Q Consensus 376 ~~~----~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e 449 (471)
.++ |-+--+. .-|+++-+.+-...+..... ......++++++++ |+.+..+..+ .+.|||.... +++
T Consensus 358 ~~l~~~~~~IgdVR-G~Glm~giE~v~d~~t~~p~---~~~~~~i~~~~~~~-Glil~~~G~~--~nviRi~PPL~is~e 430 (447)
T COG0160 358 EELQEKHPLIGDVR-GLGLMIGVELVKDRDTKEPD---AELAAKIVARAFER-GLLLLTCGPH--GNVLRILPPLTISDE 430 (447)
T ss_pred HHHHhhcCceeccc-ccceEEEEEEecCCCCCCCC---HHHHHHHHHHHHHc-CCEEeccCCC--CcEEEEeCCcccCHH
Confidence 443 2111112 22555666664321100000 01346778888877 8877765533 4689998876 999
Q ss_pred HHHHHHHHHHHHHHhh
Q 012095 450 TLQAAVERIKKGLLTL 465 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~~ 465 (471)
+++++++.|.+++++.
T Consensus 431 ~~d~~l~il~~al~~~ 446 (447)
T COG0160 431 ELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999764
No 285
>PRK07678 aminotransferase; Validated
Probab=99.79 E-value=1.9e-16 Score=162.29 Aligned_cols=357 Identities=16% Similarity=0.116 Sum_probs=212.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+... ++.. ...+....+++.+.+..+ ..+.++++++++++..
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~-~~~~~~~~lae~l~~~~~---~~~~v~f~~sGseA~e 119 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSY-FPLT-QSHEPAIKLAEKLNEWLG---GEYVIFFSNSGSEANE 119 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCc-cccc-cCCHHHHHHHHHHHHhCC---CCCEEEEeCCcHHHHH
Confidence 688899998886 33444 78899999998876321 1111 123445566666665543 2358999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCCC--Cc-----CC---H
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISEN--FL-----LD---P 218 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~--~~-----ld---~ 218 (471)
.+++.... +| ..|+....+|++....+... |. .+..+|...... +. .+ +
T Consensus 120 ~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECV 199 (451)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHH
Confidence 88886521 33 57888888888866443322 11 112222211000 00 01 2
Q ss_pred HHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc
Q 012095 219 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (471)
+.+++.+. ++..+|++...+.-.|. ..+++.++++.++|++| |+++|.||++..|-..|.. ..+....-..|
T Consensus 200 ~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~~~~~~gv~PD- 276 (451)
T PRK07678 200 KEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH-GALLISDEVICGFGRTGKA-FGFMNYGVKPD- 276 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhcCCcCchh-HHHHhcCCCCC-
Confidence 23555553 23455555433444564 56888999999999999 9999999999876333321 11111111112
Q ss_pred eEEEecCCcccCccc-hhheeeEcCHHHHHHHHH------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
+-+|+|.+| .| +.+|.+++++++++.+.. +....+++.++++.+++.+.|+.-.. ++.+++..+.-+.
T Consensus 277 ---ivt~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~-~~~~~~~~~~g~~ 351 (451)
T PRK07678 277 ---IITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMEN-ENLIERSAQLGEL 351 (451)
T ss_pred ---EEEeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHH
Confidence 346899998 77 699999999999988753 12346778899999999998875211 1223333332233
Q ss_pred HHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--CCCCcEEEEe
Q 012095 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--GDDTCIRISY 444 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--~~~~~iRis~ 444 (471)
.++.+.+.+.+.+-+.-+...|-| +-+.+.......... .......+...|+++ ||++.+.... +..+.+|++.
T Consensus 352 l~~~l~~~~~~~~~v~~vrg~Gl~-~~i~~~~~~~~~~~~--~~~~a~~i~~~l~~~-Gv~~~~~g~~v~~~~~~lrl~P 427 (451)
T PRK07678 352 LLEQLKEELGEHPLVGDIRGKGLL-VGIELVNDKETKEPA--DNDKVASVVAACKEK-GLIIGKNGDTVAGYNNVLTLSP 427 (451)
T ss_pred HHHHHHHHHhcCCCEEEEEeeceE-EEEEEecCCcccCcC--chHHHHHHHHHHHHC-CcEEeecCccccCCCCEEEEEC
Confidence 333343444444322223334433 444553210000000 001235677777776 9998764221 2236799987
Q ss_pred ec--CHHHHHHHHHHHHHHHHhhC
Q 012095 445 AA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 445 ~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.. ++++|++++++|.+++++++
T Consensus 428 pl~it~~eid~~~~~l~~~l~~~~ 451 (451)
T PRK07678 428 PLVISSEEIAFIVGTLKTALERIK 451 (451)
T ss_pred CCcCCHHHHHHHHHHHHHHHHhcC
Confidence 76 99999999999999998764
No 286
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.79 E-value=3.6e-16 Score=159.70 Aligned_cols=347 Identities=15% Similarity=0.129 Sum_probs=212.3
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+..... ...-..+....+++.+.+..+.. ..+.++++++++++.
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~~-~~~~v~f~~SGsEA~ 128 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYS-LTDFYYEPAVELAERLVEIAPGG-FEKKVFFTNSGTESN 128 (441)
T ss_pred CCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCcc-CcccCCHHHHHHHHHHHHhCCCC-CCCEEEECCchHHHH
Confidence 36888999988863 3444 6889999999987633211 11112355666777776544311 136899999999999
Q ss_pred HHHHHHhc-CCC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCC--Cc-C--------CHHHH
Q 012095 169 LQAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISEN--FL-L--------DPKVL 221 (471)
Q Consensus 169 ~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~--~~-l--------d~e~l 221 (471)
..+++... -.| +.|+..+.+|++....+... |. .+..++....-. |+ - +++.+
T Consensus 129 e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 208 (441)
T PRK05769 129 EAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFI 208 (441)
T ss_pred HHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHH
Confidence 98888642 123 67888888888876443322 21 122333211000 00 0 12345
Q ss_pred Hh-hhc-----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCce
Q 012095 222 ES-KLT-----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (471)
Q Consensus 222 ~~-~l~-----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (471)
++ .++ ++..+|++...+...|. ..+++.+++|.++|++| |+++|.||++..+...|.. ..+....-..|
T Consensus 209 e~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~tG~gr~G~~-~a~~~~gv~pD-- 284 (441)
T PRK05769 209 EDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY-GILLIDDEVQTGMGRTGKM-FAIEHFGVEPD-- 284 (441)
T ss_pred HHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccce-ehhhccCCCCC--
Confidence 55 222 23445555444555676 45688999999999999 9999999999976443321 11111211112
Q ss_pred EEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
++ +|||.++ .|+++|++++++++++.+.. ....+++.+++++.++.++|+. .++ ++.+..+++-+++.+.
T Consensus 285 iv--t~~K~l~-~G~p~gav~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~L~~---l~~---~~~~~~~~~g~~l~~~ 354 (441)
T PRK05769 285 II--TLAKAIA-GGLPLGAVIGRAELMFLPPG-SHANTFGGNPVAAAAALATLEE---LEE---GLLENAQKLGEYLRKE 354 (441)
T ss_pred EE--EEccccc-CCcccEEEEEehhhhhcCCC-CCCCCCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHH
Confidence 32 5899998 89999999999998754322 2234556789999999998875 122 4555666666666666
Q ss_pred hcCC----CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CH
Q 012095 375 FGEL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 448 (471)
Q Consensus 375 L~~~----~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~ 448 (471)
|+++ +-+.-.... |.++-+.+.+... +. .......+.+.++++ ||++.+.. .+.+|++... ++
T Consensus 355 L~~l~~~~~~~~~vrg~-G~~~~i~~~~~~~---~~--~~~~~~~~~~~~~~~-Gil~~~~~----~~~lr~~p~l~~t~ 423 (441)
T PRK05769 355 LKELKEKYEFIGDVRGL-GLMIGVELVKDRK---EP--DPKLRDKVLYEAFKR-GLLLLGAG----KSAIRIIPPLIITE 423 (441)
T ss_pred HHHHHHhCCCeeeeecc-eEEEEEEeccCCc---cc--cHHHHHHHHHHHHhC-CcEEecCC----CCEEEEeCCCCCCH
Confidence 6543 211112222 4445555532100 00 000234567777765 99987632 3578998776 99
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012095 449 TTLQAAVERIKKGLLTL 465 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~~ 465 (471)
++|++++++|.++++++
T Consensus 424 ~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 424 EEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 287
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.79 E-value=3e-16 Score=160.94 Aligned_cols=336 Identities=16% Similarity=0.106 Sum_probs=204.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE---eCChH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-TR------YTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAK 165 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~ 165 (471)
..|.|-..++.. ++.+.+++...+.+.. .+ |+......++.+...+...+.++. ..+.+++ .++++
T Consensus 35 ~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~--~~~~~~~nv~~~SG~ 110 (475)
T PLN03226 35 KGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRL--DPEKWGVNVQPLSGS 110 (475)
T ss_pred cCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCC--CcceeEEecCcCchH
Confidence 467787777653 5678888887774321 22 222222333433333344455653 3334433 25566
Q ss_pred HHHHHHHHHhcCCCCeEEEcCC---CCCChHH---HHHHcCCEEE----EecCCCCCCCcCCHHHHHhhhc-cCCcEEEE
Q 012095 166 QSILQAVLAVCSPGDEVIIPAP---FWVSYPE---MARIADATPV----ILPTRISENFLLDPKVLESKLT-EKSRLLIL 234 (471)
Q Consensus 166 ~al~~~~~~l~~~gd~Vlv~~p---~y~~~~~---~~~~~G~~~~----~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i 234 (471)
.+...++.++++|||.|+..+. .|.++.. ..+..+.... .+.++. ++..+|+++|++.+. .++++|++
T Consensus 111 ~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~pklIv~ 189 (475)
T PLN03226 111 PANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRPKLIIA 189 (475)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCCeEEEE
Confidence 6777789999999999998553 2222211 1122222222 344443 345699999999886 46776655
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-Cccchhhee
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGY 313 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~ 313 (471)
..++ +|...+ +++|.++|+++ ++++++|++|..........++. + ....++++|++|++ |..| |+
T Consensus 190 -~~S~-~s~~~D---~a~i~~ia~~~-ga~LlvD~AH~~Gli~~~~~~~p--~---~~~Div~~t~hK~L~GP~G---g~ 255 (475)
T PLN03226 190 -GASA-YPRDWD---YARMRKIADKV-GALLMCDMAHISGLVAAQEAASP--F---EYCDVVTTTTHKSLRGPRG---GM 255 (475)
T ss_pred -ecCc-CCCccC---HHHHHHHHHHc-CCEEEEEchhhhCcccCCCCCCC--C---CCCeEEEecCcccccCCCc---eE
Confidence 3334 677888 77899999999 99999999998655433222211 1 13448899999998 4444 99
Q ss_pred eEcCHHHH-----------HHHHHHH---h-cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 314 IAGPKHFV-----------AACNKIQ---S-QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 314 v~~~~~~i-----------~~l~~~~---~-~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
++++++++ +....+. . .+..+++.....++.++|+.-. ....++..++..++.+++.+.|.+.
T Consensus 256 I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~--~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 256 IFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred EEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHh--CcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 98887654 2211111 1 1233344444444455565411 1224566788889999999999885
Q ss_pred CCCeeeCCC-cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEe------ec
Q 012095 379 EGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISY------AA 446 (471)
Q Consensus 379 ~g~~~~~p~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----~~~~iRis~------~~ 446 (471)
|+.+..+. .+..+++++... + .+..++.+. +++.||.+..+..++ .+..+|+.. +.
T Consensus 334 -G~~l~~~~t~~hi~lv~~~~~-g---------i~~~~~~~~-L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~ 401 (475)
T PLN03226 334 -GYKLVTGGTDNHLVLWDLRPL-G---------LTGSRVEKV-LDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGL 401 (475)
T ss_pred -CCEEEcCCCCCCEEEEEccCC-C---------CCHHHHHHH-HHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCC
Confidence 98887532 245567777321 1 155556665 556799998765332 235688843 23
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 012095 447 SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~l~~ 464 (471)
++++++++.+.|.++++.
T Consensus 402 ~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 402 VEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 789999999999998873
No 288
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.79 E-value=2.2e-16 Score=163.07 Aligned_cols=351 Identities=11% Similarity=0.049 Sum_probs=211.3
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..|. ..++. +|.+.+++.+++.+.....+...+..+....+++.+.+.+.. ...+.++++++++++..
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~SGsEA~e 165 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTA-RKMGKVFFTNSGSEAND 165 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCC-CCCCEEEEeCChHHHHH
Confidence 688999999875 44444 788999999998763221111123456677777777654321 12357999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHH-HHHcCCE------------EEEecCCCCCCCc-------------
Q 012095 170 QAVLAVC-------SPG-DEVIIPAPFWVSYPEM-ARIADAT------------PVILPTRISENFL------------- 215 (471)
Q Consensus 170 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~-~~~~G~~------------~~~v~~~~~~~~~------------- 215 (471)
.+++... .++ +.|+..+-+|++.... +...|.. +..++.+ +.|.
T Consensus 166 ~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~ 243 (504)
T PLN02760 166 TQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP--HYWRFHLPGETEEEFST 243 (504)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCC--cccccCCCCCcHHHHHH
Confidence 9988763 233 5688888888776432 2323321 1112211 0010
Q ss_pred CCHHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC
Q 012095 216 LDPKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (471)
Q Consensus 216 ld~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (471)
...+++++.+. ++..+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..|--.|.. .......-
T Consensus 244 ~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~TGfGRtG~~-~a~e~~gv- 320 (504)
T PLN02760 244 RLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY-DILFIADEVICAFGRLGTM-FGCDKYNI- 320 (504)
T ss_pred HHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEecchhhCCcccchh-hHHHhcCC-
Confidence 01244666553 23445555444555675 55788999999999999 9999999999766322221 11111111
Q ss_pred CCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 291 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 291 ~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
.--+.+|+|.+| .| +.+|.+++++++++.+... ....+++.++++.+++.+.|+.- ++ +++.+
T Consensus 321 ---~PDivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i---~~--~~l~~ 391 (504)
T PLN02760 321 ---KPDLVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIY---KE--RNIPE 391 (504)
T ss_pred ---CCcEEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHH
Confidence 112567899997 66 4899999999999887531 23457778999999999988752 11 12334
Q ss_pred HHHHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012095 363 AFRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 439 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~ 439 (471)
+.+++-+++.+.|++ .+-+.-+... |.++-+.+.+.................+.+.++++ ||.+.+.. +.
T Consensus 392 ~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-----~~ 464 (504)
T PLN02760 392 HVNKIAPRFQDGIKAFSGSPIIGEIRGT-GLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKR-GMLVRVAG-----DN 464 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeeEEeC-ceEEEEEEecCCcccccccchhHHHHHHHHHHHhC-CcEEEecC-----CE
Confidence 444444444444443 3222222233 34455555321100000000000134577777765 99987732 46
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 440 IRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 440 iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
+|++.. .++++|++++++|.++++++
T Consensus 465 lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 465 IMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 899966 59999999999999998765
No 289
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=2.1e-16 Score=161.15 Aligned_cols=345 Identities=15% Similarity=0.196 Sum_probs=210.6
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. +|.+.+++.+++.+....+.+ .+....+++.+.+..+ ..+.+.++++++++.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~ 122 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTP----TELEIEFAKMLKEAIP---SLEKVRFVNSGTEAV 122 (428)
T ss_pred CCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCC----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHHHH
Confidence 46888999988863 3443 688999999998764332212 2445566666654433 246899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHHH-cCCEEEE--------ecCC-CCC----CCcCCHHHHHhhhcc---CC
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARI-ADATPVI--------LPTR-ISE----NFLLDPKVLESKLTE---KS 229 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~G~~~~~--------v~~~-~~~----~~~ld~e~l~~~l~~---~~ 229 (471)
..+++.... .| ..|+...-+|++....+.. .|..... ++.. ..+ .+ .|++.+++.+.. +.
T Consensus 123 e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~v 201 (428)
T PRK12389 123 MTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-NDIEALKEALDKWGDEV 201 (428)
T ss_pred HHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-CCHHHHHHHHHhcCCcE
Confidence 988886532 33 6788888888886644332 2211110 0000 000 01 278888888852 34
Q ss_pred cEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 230 RLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
.+|++...+...|.. .+++.+++|.++|++| |+++|.||++..+..+.........+.+ | +-+|+|.+| .|
T Consensus 202 aavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~Rt~~~~a~~~~gv~P--D----ivt~gK~lg-gG 273 (428)
T PRK12389 202 AAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA-GALVIYDEVITAFRFMYGGAQDLLGVEP--D----LTALGKIIG-GG 273 (428)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCcchhhHHhCCCC--C----eeeechhhc-CC
Confidence 455555446667754 5788999999999999 9999999999976321110111112221 2 347899998 88
Q ss_pred hhheeeEcCHHHHHHHHH---HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CCC-
Q 012095 309 WRLGYIAGPKHFVAACNK---IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEG- 380 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~---~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g- 380 (471)
+.+|.+++++++++.+.. .....+++.++++.+++.+.|+.-.. ++ +.++.+++-+++.+.|++ .+-
T Consensus 274 ~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~-~~----l~~~~~~~g~~l~~~L~~l~~~~~~~ 348 (428)
T PRK12389 274 LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ-EG----VYEKLDRLGAMLEEGILEAAEKHGIT 348 (428)
T ss_pred CceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhc-cc----HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999988752 12234667899999999888875211 22 333344444444444443 321
Q ss_pred CeeeCCCcceEEeEecCCccCCccc--CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSEAE--GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l 458 (471)
+.+.... |++ -+.+......... ..........+.+.|+++ ||++.+.. .+.+.+++..++++|+++++++
T Consensus 349 ~~v~r~~-g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~~~~~l~~t~e~id~~~~~l 421 (428)
T PRK12389 349 ITINRLK-GAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQ-GINLAPSK----YEAWFLTTAHTEEDIEETLEAV 421 (428)
T ss_pred EEEEecC-cEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHC-CcEeecCC----CCCeeecCCCCHHHHHHHHHHH
Confidence 2232333 343 2333211000000 000000134677777765 99998852 1235677777999999999999
Q ss_pred HHHHHh
Q 012095 459 KKGLLT 464 (471)
Q Consensus 459 ~~~l~~ 464 (471)
++++++
T Consensus 422 ~~~l~~ 427 (428)
T PRK12389 422 DRAFAQ 427 (428)
T ss_pred HHHHHh
Confidence 999865
No 290
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.79 E-value=6.2e-17 Score=160.73 Aligned_cols=324 Identities=14% Similarity=0.103 Sum_probs=210.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|. ..++. +|.+.+++.+++.+.. .+++. -..+....+++.+.+..+ .+.+++++++++++.
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~-~~~~~-~~~~~~~~la~~l~~~~~----~~~v~~~~SGseA~e 95 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV-VAGPM-FEHEEKEEMLEELSKWVN----YEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcC-CccCC-cCCHHHHHHHHHHHhhcC----CCEEEEeCchHHHHH
Confidence 678899998875 34444 6788899999987632 22221 123445556666654433 358999999999999
Q ss_pred HHHHHhc-CCC-CeEEEcCCCCCChHHHHHHc--------CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCC
Q 012095 170 QAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA--------DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN 239 (471)
Q Consensus 170 ~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~--------G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~N 239 (471)
.+++... .+| +.|+..+.+|++....+... +..+....+.. -.| .|++.+++.+.+++++|++...+.
T Consensus 96 ~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAvivEpi~g 173 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVIFEPIQG 173 (364)
T ss_pred HHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEEEcCCcC
Confidence 9988753 345 88999999998865443321 11110000000 012 278889998887888888766665
Q ss_pred Cccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC-ccccccCCCCCCceEEEecCCcccCccchhheeeEcC
Q 012095 240 PTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 240 PtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
..|. ..+++.+++|.++|++| |+++|+||++..+ ..|.. ......+.+ | +-+|+|.+| .|+.+|.++.+
T Consensus 174 ~gG~~~~~~~yl~~lr~lc~~~-gillI~DEv~tG~-RtG~~~a~~~~gv~P--D----iv~~gK~lg-gG~P~~a~~~~ 244 (364)
T PRK04013 174 EGGIVPAKEEFVKTLRDLTEDV-GALLIADEVQSGL-RTGKFLAIEHYKVEP--D----IVTMGKGIG-NGVPVSLTLTN 244 (364)
T ss_pred CCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcC-CCCchhHHHhcCCCC--C----EEEeccccc-CCceeEEEEec
Confidence 5564 56788999999999999 9999999999977 33321 111122222 2 445789998 78999999988
Q ss_pred HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecC
Q 012095 318 KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 318 ~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~ 397 (471)
.++.. .....+++.++++.+++.+.|+.-.. ++.+++..+. + ..+.. +-+.-.... |.++-+.+.
T Consensus 245 ~~~~~----~~~~~T~~gnp~~~aaa~a~l~~i~~-~~l~~~~~~~-------l-~~l~~-~~v~~vRG~-Gl~~gve~~ 309 (364)
T PRK04013 245 FDVER----GKHGSTFGGNPLACKAVAVTLRILRR-ERLVEKAGEK-------F-IEIKG-ERVVTTRGR-GLMIGIVLK 309 (364)
T ss_pred ccccC----CCcCCCCCcCHHHHHHHHHHHHHHHh-ccHHHHHHHH-------H-HHhcc-CcceeeeeC-cEEEEEEeC
Confidence 76521 23445778899999999988875211 1222222221 2 22222 222212223 555666664
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
. ....+.+.++++ ||++.+.. .+.+|+.... +++++++++++|++++.++.
T Consensus 310 ~-------------~~~~i~~~~~~~-Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 310 K-------------PVGKYVEELQNR-GYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred C-------------cHHHHHHHHHhC-CcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 2 345788888775 89987632 3679998775 99999999999999998754
No 291
>PRK07482 hypothetical protein; Provisional
Probab=99.78 E-value=3.8e-16 Score=160.35 Aligned_cols=352 Identities=12% Similarity=0.070 Sum_probs=211.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+..+ +... ....+.+..+++.+.+.... ..+.++++++++++
T Consensus 47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~-~~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGSEA 123 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAY-YHTYVGHGTEASITLSKRIIDRAPA--GMSKVYYGLSGSDA 123 (461)
T ss_pred CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCc-cccccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHH
Confidence 36889999998874 3333 78899999999876321 1111 12346667777777654431 34689999999999
Q ss_pred HHHHHHHhc------C-CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCC---c--------
Q 012095 168 ILQAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENF---L-------- 215 (471)
Q Consensus 168 l~~~~~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~---~-------- 215 (471)
+..+++... . ++ ..|+....+|++....+..... .+..++....... .
T Consensus 124 ve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 203 (461)
T PRK07482 124 NETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSA 203 (461)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHH
Confidence 999988763 1 23 5688888889886533222111 1122221110000 0
Q ss_pred CCHHHHHhhhc----cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCC
Q 012095 216 LDPKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPG 289 (471)
Q Consensus 216 ld~e~l~~~l~----~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~ 289 (471)
-+++.+++.+. ++..+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++..|--.|... .....+.+
T Consensus 204 ~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~~a~~~~gv~P 282 (461)
T PRK07482 204 YCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY-DILLIADEVVTGFGRLGSMFGSDHYGIEP 282 (461)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCcchhhHHhcCCCC
Confidence 03567777773 234455554335445655 6788999999999999 99999999999873323211 11111211
Q ss_pred CCCceEEEecCCcccCccch-hheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
| +-+++|.++ .|. .+|.+++.+++.+.+.. .....+++.++++.+++.+.|+.-.. ++ +.
T Consensus 283 --D----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~-~~----l~ 350 (461)
T PRK07482 283 --D----LITVAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILER-EN----LV 350 (461)
T ss_pred --C----EEEEccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHh-CC----HH
Confidence 2 334789998 785 89999999998887752 12335677899999999998874111 12 22
Q ss_pred HHHHHHHHHHHHHhc----CCCCCeeeCCCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 362 KAFRERRDFLVKSFG----ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~----~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
+..++.-+++.+.|+ +.+-+.-+... |.++.+.+..... ....+.. ......++..|+++ ||++.++. .
T Consensus 351 ~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~-~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~~---~ 424 (461)
T PRK07482 351 GNAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRD-DRTPFDPALKIGPQVSAAALER-GVIARAMP---H 424 (461)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCC-cCCCCChhhHHHHHHHHHHHHC-CcEEecCC---C
Confidence 333334444444443 34322223333 4445556532100 0000000 00134677888875 89886532 1
Q ss_pred CCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 437 DTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 ~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+.+|+... .++++|++++++|.++++++
T Consensus 425 ~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 425 GDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 256888744 49999999999999999764
No 292
>PRK05965 hypothetical protein; Provisional
Probab=99.78 E-value=2.7e-16 Score=161.31 Aligned_cols=358 Identities=13% Similarity=0.101 Sum_probs=214.7
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. ++.+.+|+.+++.+.........-..+.+..+++.+.+.... ..+.++++++++++.
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGSEAv 120 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPG--SLNHVYFTLGGSDAV 120 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCC--CcCEEEEeCChhHHH
Confidence 36888999988763 3333 788999999998763221110011234555677766654321 346899999999999
Q ss_pred HHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCC--CCCcCC--------
Q 012095 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRIS--ENFLLD-------- 217 (471)
Q Consensus 169 ~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~--~~~~ld-------- 217 (471)
..+++.... ++ ..|+..+.+|++....+.. .|. .+..++.... ..+.-|
T Consensus 121 e~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (459)
T PRK05965 121 DSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAAS 200 (459)
T ss_pred HHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHH
Confidence 998886431 33 5688889899886533222 111 1122222110 001113
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+|++...+.-.|. +.+++.+++|.++|++| |+++|.||+...|--.|.. .......-..|
T Consensus 201 ~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~-gillI~DEV~tGfGRtG~~-~a~~~~gv~PD 278 (459)
T PRK05965 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL-GILFVADEVITGFGRTGPL-FACEAEGVVPD 278 (459)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhccCccCchh-hhHhhcCCCCC
Confidence 256777664 23455555444555665 56888999999999999 9999999999987333321 11111111111
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
+-+|+|.++ .| +.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.- + -+++.+..
T Consensus 279 ----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l---~--~~~l~~~~ 348 (459)
T PRK05965 279 ----LMTVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLY---H--EGGLLANG 348 (459)
T ss_pred ----eEEechhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHH---H--hccHHHHH
Confidence 444789998 88 499999999999987752 223456778999999988888741 1 11233334
Q ss_pred HHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 365 ~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
++.-+++.+.|++ .+.+.-+... |+++-+.+....... ..+. .......+.+.++++ ||++.+.. .+.+
T Consensus 349 ~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~-~~~~~~~~~~~~i~~~~~~~-Gll~~~~g----~~~i 421 (459)
T PRK05965 349 QKAGPRFAAGLDALRAHPLVGDVRGR-GLLGALELVADKATK-TPFDAALDPADRIFDRAYAN-GLVFRAFG----DGVL 421 (459)
T ss_pred HHHHHHHHHHHHhhccCCCEEEEeec-ceEEEEEEecccccc-CCCCchhHHHHHHHHHHHhC-CeEEEecC----CcEE
Confidence 4444444455444 3322222333 444555553210000 0000 000134567777765 99987631 3568
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhhCCCCC
Q 012095 441 RISYA--ASLTTLQAAVERIKKGLLTLRPGVP 470 (471)
Q Consensus 441 Ris~~--~~~e~i~~~~~~l~~~l~~~~~~~~ 470 (471)
|++.. .+++++++++++|.++++++...++
T Consensus 422 ~~~PpL~it~~ei~~~~~~l~~~l~~~~~~~~ 453 (459)
T PRK05965 422 GFAPALCCTEGEFDLIFERTRKTLDDVLADPD 453 (459)
T ss_pred EEECCCcCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence 88865 4999999999999999988654443
No 293
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.78 E-value=1.4e-16 Score=161.93 Aligned_cols=351 Identities=15% Similarity=0.119 Sum_probs=208.8
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+.. .+. ...+....+++.+.+..+. ..+.+.++++++++.
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~---~~~~~~~~la~~L~~~~~~--~~~~v~f~~SGsEA~ 123 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT-SYG---LTSEQEILFAEELFSYLGL--EDHKIRFVSSGTEAT 123 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHHH
Confidence 36888999988863 3444 7899999999987643 221 1134455566666554432 236899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHH---HHHcCCEE-----EEecCCC--CC----CCcCCHHHHHhhhcc---CC
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEM---ARIADATP-----VILPTRI--SE----NFLLDPKVLESKLTE---KS 229 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~---~~~~G~~~-----~~v~~~~--~~----~~~ld~e~l~~~l~~---~~ 229 (471)
..+++.... .| ..|+....+|++.... ....+... ....... .. .| -|++.+++.+.. +.
T Consensus 124 e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~ 202 (433)
T PRK00615 124 MTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGHRV 202 (433)
T ss_pred HHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCCce
Confidence 988886532 34 5788888888885421 11111000 0000000 00 01 177888888742 34
Q ss_pred cEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 230 RLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
.+|++.......|.. .+++.+++|.++|++| |+++|.||++.++.. |. ........-..| | .+|+|.+| .|
T Consensus 203 aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~R~-G~-~ga~~~~gv~PD--i--~~~gK~lg-gG 274 (433)
T PRK00615 203 AGVIFEPICANMGVVLPKPGFIEGIIQTCRRT-GSLSIMDEVVTGFRV-AQ-GGAAAIYHVKPD--I--TVYGKILG-GG 274 (433)
T ss_pred EEEEECCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcccccccc-cH-hHHHHhcCCCCC--e--EEEccccc-CC
Confidence 455554445556764 4678899999999999 999999999987633 32 111111111112 3 34899998 78
Q ss_pred hhheeeEcCHHHHHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC--Cee
Q 012095 309 WRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VKM 383 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g--~~~ 383 (471)
+.+|++++++++++.+... ....+++.++++.+++.+.|+.-.. ++.++++.+.-+..++.+.+.+.+. | +..
T Consensus 275 ~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~-~~~~~~~~~~g~~l~~~l~~~~~~~-g~~v~~ 352 (433)
T PRK00615 275 LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCRE-QGFYTQLSTLEQNFLSPIEEMIRSQ-GFPVSL 352 (433)
T ss_pred cceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHc-CCCeEE
Confidence 8899999999999988532 1224556788898888888875211 1222332222222233333433332 3 334
Q ss_pred eCCCcceEEeEecCCccCC--cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGS--EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.. .|. ++.+.+...... .............+...|+++ ||++.|+... .+ =+|..+++++|+++++.+.++
T Consensus 353 ~r-~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~---~~-~ls~~ht~~did~~~~a~~~~ 425 (433)
T PRK00615 353 VR-YGS-MFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK-GVYLSPSPFE---AS-FLSSAHSMENLDYAQNVLIDS 425 (433)
T ss_pred Ee-ece-EEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC-CeeecCcccc---cc-ceecCCCHHHHHHHHHHHHHH
Confidence 44 333 345555321000 000000000134678888876 9999885421 11 267777999999999999999
Q ss_pred HHhhC
Q 012095 462 LLTLR 466 (471)
Q Consensus 462 l~~~~ 466 (471)
+++.-
T Consensus 426 ~~~~~ 430 (433)
T PRK00615 426 LEKVF 430 (433)
T ss_pred HHHHh
Confidence 98754
No 294
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=7.9e-16 Score=153.73 Aligned_cols=290 Identities=13% Similarity=0.129 Sum_probs=204.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcE--EEeCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i--~it~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
+..++.+.+.+++.+.+|. .++++ ++|+|+|+++..++... ..++++|++++-.|.+....++..|.+.+.|+.
T Consensus 62 ~~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~ 139 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITS 139 (380)
T ss_pred ChHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceecc
Confidence 3567888888888888885 33444 88999999987665443 257889999999999999999999999988988
Q ss_pred CCCCCCcCCHHHHHhhhccC---CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC---eEEEEccCCCccccCCCCcc
Q 012095 209 RISENFLLDPKVLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR---LLVLSDEIYEHIIYAPATHT 282 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~---~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~---~~ii~De~y~~~~~~~~~~~ 282 (471)
++ ++.+|+++|+++++++ |.+|+++.++|+||.+.| +++|+++|++| + +++++|.+|+.+...-....
T Consensus 140 ~~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~-g~~~~~lHVDaA~gg~~~p~~~~~ 213 (380)
T PRK02769 140 LP--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKI-GIDDYYIHADAALSGMILPFVNNP 213 (380)
T ss_pred CC--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh-CCCceEEEEEecccceeecccCcc
Confidence 64 4569999999999775 888889999999999999 89999999999 7 79999999987443100000
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh-------cccCCCChHHHHHHHHHHhccCCChH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGE 355 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~-------~~~~~~~~~~q~aa~~~L~~~~~~~~ 355 (471)
....+. .+-..+..|.+|.++ ....+|+++.+++.++.+..... ....+.+.....++.++|..- ..+
T Consensus 214 ~~~d~~--~~vDsis~s~HK~~~-~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~l--g~~ 288 (380)
T PRK02769 214 PPFSFA--DGIDSIAISGHKFIG-SPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL--GSK 288 (380)
T ss_pred ccCCcc--CCCCEEEECCcccCC-CCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHH--CHH
Confidence 011111 134467788999986 34568999988877665421111 112223444555555666531 356
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 356 VVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
.+++..++..+..+++.+.|++. |++.. .|.... +.++.| + .++ .++..+...+
T Consensus 289 G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~-v~f~~~--------------~-~~~----~~~w~l~~~~---- 343 (380)
T PRK02769 289 GLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSIT-VVFPCP--------------S-ERI----WKKWHLATSG---- 343 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceE-EEEcCC--------------C-HHH----HhCeeEcccC----
Confidence 78888899999999999999886 87654 455444 444433 2 122 2333333222
Q ss_pred CCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 435 GDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 435 ~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
+++|+.+.. +.+.++++++.|...+.
T Consensus 344 ---~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 344 ---NQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred ---CEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 478888876 88899999999988765
No 295
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.77 E-value=2.4e-16 Score=157.03 Aligned_cols=317 Identities=11% Similarity=0.073 Sum_probs=213.8
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCCCCCH---HHHHHHHHHHHHHhCCCCCCCcEEEe-CChHHHHHHHHHHhcCCC
Q 012095 108 DTPVLIAEAGINAIRE----GFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVS-NGAKQSILQAVLAVCSPG 179 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~it-~G~~~al~~~~~~l~~~g 179 (471)
..|+.+++|+...+.+ +...+....-.. ++.+.+.+.+++.+|.+ +..+++++ .+++.+++.++..++.+|
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl~~~g 91 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNLLGGG 91 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhcCCCC
Confidence 3588999999887632 122222222233 66677777777777742 33456555 668888999999999999
Q ss_pred CeEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCcCCHHHHHh-hhccCCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 180 DEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLES-KLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 180 d~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~-~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
|.+++..-+..+. .++++.+|.. ..+..+...++ .+..++++ .+++++++|.+++-.+.||...+ .+++|
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~i--- 164 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPDT--- 164 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccccc---
Confidence 8888765544333 3578888865 56655432333 34444444 77778999999999999999984 25555
Q ss_pred HHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH---------
Q 012095 257 VAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI--------- 327 (471)
Q Consensus 257 ~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~--------- 327 (471)
+ ++++|+|.+.+. +.....+.. ++ +++.|-.|.+|.+| +|++++++++++++...
T Consensus 165 ---~-g~l~vVDavss~----g~~~idv~~----~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~ 228 (360)
T PRK05355 165 ---G-DVPLVADMSSDI----LSRPIDVSK----FG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKT 228 (360)
T ss_pred ---C-CCcEEEEcCccc----cCccCCHHH----cc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHH
Confidence 7 899999999875 222222221 23 88888899998666 89999999888765431
Q ss_pred --H-hcccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC---CcceEEeEecCCcc
Q 012095 328 --Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP---QGAFYLFIDFSTYY 400 (471)
Q Consensus 328 --~-~~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---~~g~~~~~~~~~~~ 400 (471)
. .....+++....+++.++|+.- .+. .++.+.++.++..+++++.|++++.+....+ ..+..+.+.+++..
T Consensus 229 ~~~~~~~~~Tp~~~~i~aL~~aL~~i--~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~ 306 (360)
T PRK05355 229 HADNDSMYNTPPTFAIYLAGLVFKWL--KEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEE 306 (360)
T ss_pred HHhcCCccCCCcHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChH
Confidence 1 1123567777778888888752 123 4888999999999999999999842222111 23333555666421
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
+..++...+.++ |+.+.+|.. ..+.+|+|+.. +.+|++++++.|+++++.
T Consensus 307 -----------~~~~~~~~~~~~-Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 307 -----------LDKKFLAEAKAA-GLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred -----------HHHHHHHHHHHC-CCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 335565666554 888866653 35789999987 899999999999998764
No 296
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=4.8e-16 Score=157.79 Aligned_cols=214 Identities=13% Similarity=0.171 Sum_probs=148.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~ 209 (471)
..++++.++++. | ....+++++|. .++..++.+++++||+|+++...|.+.. ..+...|++++.++ +
T Consensus 71 ~~~le~~la~l~----g---~~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 71 VEALENRIASLE----G---GVHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred HHHHHHHHHHHh----C---CCeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 345555565554 4 23445555555 7788888888999999999999998764 34577899999997 2
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
+ .|++++++++++++++|++.++.||+|.+.+ +++|+++|+++ ++++|+|.++..... ..+ ..
T Consensus 142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~-gi~livD~t~a~g~~----~~p-~~--- 204 (437)
T PRK05613 142 P-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRN-QVPLIVDNTIATAAL----VRP-LE--- 204 (437)
T ss_pred C-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCeEEEECCCccccc----cCh-HH---
Confidence 2 2889999999999999999999999999999 99999999999 999999999864211 111 11
Q ss_pred CCCceEEEecCCcccCccchhh-eeeEcCHH-----------------------------------HH-HHHHHHHhccc
Q 012095 290 MWERTLTVNGFSKAFAMTGWRL-GYIAGPKH-----------------------------------FV-AACNKIQSQFT 332 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~-----------------------------------~i-~~l~~~~~~~~ 332 (471)
.+-.+++.|++|.++-.|.-+ |.++.+.+ ++ +.........+
T Consensus 205 -~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 283 (437)
T PRK05613 205 -LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTG 283 (437)
T ss_pred -hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcC
Confidence 234599999999986444444 44443221 00 11122334456
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
.+.+++..+.+..-|+ -+....++..++...+.+.|++.|.+
T Consensus 284 ~~~~p~~a~l~~rgl~-------TL~lR~~~~~~nA~~lA~~L~~hp~V 325 (437)
T PRK05613 284 ATLSPFNAWVTAQGLD-------TLSLRLERHNENAIKVAEFLNNHEKV 325 (437)
T ss_pred CCCCHHHHHHHHcccC-------cHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6677776544443333 35566667778888889999988765
No 297
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.77 E-value=1.7e-16 Score=172.72 Aligned_cols=308 Identities=18% Similarity=0.165 Sum_probs=219.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH----HHHHHHHHHhcCC-CC----eEEEcCCCCCChHHHHHHcCCE
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAK----QSILQAVLAVCSP-GD----EVIIPAPFWVSYPEMARIADAT 202 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~----~al~~~~~~l~~~-gd----~Vlv~~p~y~~~~~~~~~~G~~ 202 (471)
+|+.++...+.+++.+..|. ++|+++++++ +++.++++.+.++ || +|+++...|.+....+...|++
T Consensus 564 ~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~ 639 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMK 639 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCE
Confidence 67777777777777777673 8999999988 8899999999866 88 8999999999988888889999
Q ss_pred EEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC
Q 012095 203 PVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 279 (471)
Q Consensus 203 ~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~ 279 (471)
++.++++.+ ..+|+++|++++++ ++++|++++|+|-+|...+ +++|+++|+++ |+++++|.++..-...
T Consensus 640 vv~v~~d~~--G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~-Galv~vDgAq~~a~~~-- 711 (993)
T PLN02414 640 IVVVGTDAK--GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDN-GGQVYMDGANMNAQVG-- 711 (993)
T ss_pred EEEeccCCC--CCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHc-CCEEEEEecCHHhccC--
Confidence 999999743 46999999999984 6789999999999999988 99999999999 9999999998531110
Q ss_pred CccccccCCCCCCceEEEecCCcccC----ccchhheeeEcCHHHHHHHHHH---------H--hcccCCC---ChH---
Q 012095 280 THTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNKI---------Q--SQFTSGA---SSI--- 338 (471)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~S~SK~~g----~~G~R~G~v~~~~~~i~~l~~~---------~--~~~~~~~---~~~--- 338 (471)
... ++..+-.+++.|..|+|+ ..|--+|++.+.++++..+-.. . ...+.|. .+.
T Consensus 712 -l~~----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~a 786 (993)
T PLN02414 712 -LTS----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSA 786 (993)
T ss_pred -cCC----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhH
Confidence 011 222455588999999775 2345589998888766654311 0 0111122 112
Q ss_pred -HHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCCHHH
Q 012095 339 -SQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSES 415 (471)
Q Consensus 339 -~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~ 415 (471)
...++..++.. ...+.+.+..+....+.+++.+.|.+..++.+..|.+.+| +.++++... ...+ .+..+
T Consensus 787 l~l~~A~~yi~~--lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~--~~~g----~~~~d 858 (993)
T PLN02414 787 LILPISYTYIAM--MGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK--NTAG----IEPED 858 (993)
T ss_pred HHHHHHHHHHHH--HCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc--cccC----CCHHH
Confidence 22223333332 1356788888888889999999998754566555555432 223443210 0001 25688
Q ss_pred HHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 416 LCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 416 l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.++|++ +||...- ..|-..+++|++... ++++|+++++.|..+..+..
T Consensus 859 i~krL~d-~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 859 VAKRLMD-YGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHHHHHH-cCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 9999995 5886543 334457899999886 88999999999988887754
No 298
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=4.7e-16 Score=155.28 Aligned_cols=211 Identities=11% Similarity=0.134 Sum_probs=146.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~ 208 (471)
...+|.+.++++. | .+..+++++++.||..++.+++++||+|+++.+.|.... ..+...|+++++++.
T Consensus 65 ~~~~lE~~la~le----g----~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~ 136 (384)
T PRK06434 65 TVQAFEEKYAVLE----N----AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDT 136 (384)
T ss_pred hHHHHHHHHHHHh----C----CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECC
Confidence 3456666666664 3 346788888889999999999999999999988776655 556778999999987
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
++.+.+.++. +++++|++.+|.|||+.+.+ +++|+++|+++ + +++|.++..- +.+ .++ .
T Consensus 137 ~~~~~~~l~~--------~~tklv~~e~~snpt~~v~D---i~~I~~la~~~-~--lvVD~t~~s~-~~~---~pl-~-- 195 (384)
T PRK06434 137 DRLNSLDFDP--------SNYDLIYAESITNPTLKVPD---IKNVSSFCHEN-D--VIVDATFASP-YNQ---NPL-D-- 195 (384)
T ss_pred CChhheeecC--------CCeeEEEEEcCCCCCceeec---HHHHHHHHHHc-C--eEEECCCCCc-ccC---Cch-h--
Confidence 6433333221 36899999999999999988 99999999999 7 4559997421 111 111 1
Q ss_pred CCCCceEEEecCCcccCccc-hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G-~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
.+-.+++.|.+|.++-+| .=.|.+++ ++++.++++..+.....+.+++..+.+..- -+.+....++..+
T Consensus 196 --~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~g-------L~tL~~R~~r~~~ 266 (384)
T PRK06434 196 --LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRG-------LKTLGLRMEKHNK 266 (384)
T ss_pred --cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhC-------CCcHHHHHHHHHH
Confidence 234589999999996323 33577766 566777777655455555565543332222 2336666777778
Q ss_pred HHHHHHHHhcCCCCC
Q 012095 367 RRDFLVKSFGELEGV 381 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~ 381 (471)
+...+.+.|++.|.+
T Consensus 267 ~a~~~a~~L~~~p~v 281 (384)
T PRK06434 267 NGMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHHcCCCc
Confidence 888888888887765
No 299
>PRK06917 hypothetical protein; Provisional
Probab=99.77 E-value=1.5e-15 Score=155.36 Aligned_cols=356 Identities=14% Similarity=0.123 Sum_probs=212.5
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+....+.. .-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsEAv 104 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSPG--DLNWSFFVNSGSEAN 104 (447)
T ss_pred CCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCCC--CCCEEEEeCChHHHH
Confidence 3688899998885 33554 789999999998764332211 11235566677777654431 235899999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHH-cCCE------------EEEecCCCCCC--Cc--------CC
Q 012095 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADAT------------PVILPTRISEN--FL--------LD 217 (471)
Q Consensus 169 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~G~~------------~~~v~~~~~~~--~~--------ld 217 (471)
..+++... .+| ..|+..+.+|++....+.. .|.. +..++...... +. -+
T Consensus 105 e~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 184 (447)
T PRK06917 105 ETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLAC 184 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHH
Confidence 99988752 133 6788889889887644332 2211 11222111000 00 02
Q ss_pred HHHHHhhhcc----CCcEEEEcCCC-CCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCC
Q 012095 218 PKVLESKLTE----KSRLLILCSPS-NPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGM 290 (471)
Q Consensus 218 ~e~l~~~l~~----~~~~i~i~~p~-NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~ 290 (471)
++.+++.+.. +..+|++.-.+ |-.|. ..+++.+++|.++|++| |+++|.||++..+--.|... .....+.+
T Consensus 185 ~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~-g~llI~DEv~tGfGRtG~~~a~~~~gv~P- 262 (447)
T PRK06917 185 ATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY-DILFIADEVMTGLGRTGAMFAMEHWGVEP- 262 (447)
T ss_pred HHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc-CCEEEEechhhCcCcccchhhHHhcCCCC-
Confidence 4566666642 34455554323 34454 66799999999999999 99999999998752222211 01112221
Q ss_pred CCceEEEecCCcccCccch-hheeeEcCHHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012095 291 WERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (471)
Q Consensus 291 ~~~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~ 365 (471)
| +-+|+|.++ .|. .+|.+++++++++.+... ....+++.++++.+++.+.|+.- ++ +.+.+..+
T Consensus 263 -D----i~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l---~~--~~l~~~~~ 331 (447)
T PRK06917 263 -D----IMTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYM---EK--HNLPEKAA 331 (447)
T ss_pred -C----EEEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHH---HH--CCHHHHHH
Confidence 2 456899998 785 899999999999887532 12346678999998988888741 11 12333333
Q ss_pred HHHHHHHHHhcC----CCCCeeeCCCcceEEeEecCCccCCcccCCC-CCCCHHHHHHHHHHcCCEEEECCCC-C-C-CC
Q 012095 366 ERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDA-F-G-DD 437 (471)
Q Consensus 366 ~~r~~l~~~L~~----~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~-f-~-~~ 437 (471)
++-+++.+.|++ .+-+.-+...| .++.+.+-..... .+... .......+...++++ ||++.|+.. . + ..
T Consensus 332 ~~g~~l~~~L~~l~~~~~~i~~vrG~G-l~~~ie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~~~g~~~ 408 (447)
T PRK06917 332 EKGEYLIKGLQKVQQQSTIIGDVRGKG-LLIGVEFVADKKT-KQPFSKSQAVASELISVAAKN-GLLLYPAVAGQDGKEG 408 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeecc-eEEEEEEeccCCc-CCCCcchhHHHHHHHHHHHhC-CcEEEecccccCCCCC
Confidence 444444444433 32222223333 4344444211000 00000 000245677777775 999987421 0 1 13
Q ss_pred CcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 438 TCIRISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 438 ~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.+|++.. .++++|++++++|.++++++.
T Consensus 409 ~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 409 DAVIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 67899866 599999999999999998763
No 300
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.76 E-value=1.1e-15 Score=155.99 Aligned_cols=345 Identities=14% Similarity=0.075 Sum_probs=210.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+..+.. ......+....+++.+.+.... ..+.+.+++++++++.
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e 120 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAP-AFQMGHPKAFELANRIAEIAPG--GLNHVFFTNSGSESVD 120 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHHH
Confidence 578899998886 33444 7889999999987522111 1112245556677776654321 2358999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHH-cC------------CEEEEecCCCC---CCCcC--------C
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-AD------------ATPVILPTRIS---ENFLL--------D 217 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~G------------~~~~~v~~~~~---~~~~l--------d 217 (471)
.+++.... +| ..|+....+|++....+.. .| ..+..+|.... ..|.. .
T Consensus 121 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 200 (442)
T PRK13360 121 TALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAEL 200 (442)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHH
Confidence 88886431 22 5788888888886432221 11 11222332210 01111 1
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+|++...+...|.. .+++.+++|.++|++| |+++|.||++..+-..|.. ..+....-..|
T Consensus 201 ~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD 278 (442)
T PRK13360 201 ADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAP-FAAQYFGVTPD 278 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccc-hhhhhcCCCCc
Confidence 456777764 234455554446566764 6788999999999999 9999999999765322221 11111111112
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
+-+|+|.++ .| +.+|.+++++++.+.+.. +....+++.++++..++.+.|+.- ++ +.+.++.
T Consensus 279 ----ivt~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l---~~--~~l~~~~ 348 (442)
T PRK13360 279 ----LLTCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLY---ER--EGLLTRA 348 (442)
T ss_pred ----eeeeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHH
Confidence 347899997 66 789999999999887753 123356678999988888888741 11 1244455
Q ss_pred HHHHHHHHHHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012095 365 RERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 441 (471)
Q Consensus 365 ~~~r~~l~~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iR 441 (471)
+++-+++.+.|+++ +.+.-.... |.+.-+.+..... .......++...|+++ ||++.++. +.+|
T Consensus 349 ~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~~~~l~~~~~------~~~~~~~~~~~~l~~~-Gvl~~~~~-----~~lr 415 (442)
T PRK13360 349 ARLAPYWEDALHSLRDAPHVIDIRNL-GLVGAVELAPRDG------KPGKRAYEVFLKCFEK-GLMIRYTG-----DILA 415 (442)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeeecc-ceEEEEEEecCCC------CcchhHHHHHHHHHHC-CcEEEecC-----CEEE
Confidence 55555566665543 222112222 3333333321100 0001345778888776 99987642 4799
Q ss_pred EEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 442 ISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 442 is~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
|+.. .++++|++++++|.++++++
T Consensus 416 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 416 LSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 9965 49999999999999998764
No 301
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=1.8e-17 Score=146.90 Aligned_cols=166 Identities=23% Similarity=0.222 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH-HHHHHcCCEEEEecCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTRISEN 213 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~~v~~~~~~~ 213 (471)
.++++.++++++ .+.+++++++|+++++..+++++.++|++|+++++.|.+.. ..++..|++++.++.+....
T Consensus 3 ~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 3 EELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence 567888888763 36679999999999999999999988999999999999988 88899999999999875443
Q ss_pred CcCCHHHHHhhh-ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 214 FLLDPKVLESKL-TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 214 ~~ld~e~l~~~l-~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
...+.+.+++.. .++++++++++++||+|...+ .++|.++|+++ ++++|+|++|..+...... .... ..+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~-~~~li~D~a~~~~~~~~~~----~~~~-~~~ 147 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEY-GILLLVDAASAGGASPAPG----VLIP-EGG 147 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHc-CCEEEEecccccccccccc----cccc-ccc
Confidence 333433555443 567889999999999999999 58889999999 9999999999986654321 1111 134
Q ss_pred ceEEEecCCcccCccchhheeeEcC
Q 012095 293 RTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
..+++.|++|.++. .++||++++
T Consensus 148 ~d~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 148 ADVVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred CCEEEEEcccccCC--CceEEEEeC
Confidence 56889999999973 789998753
No 302
>PRK06062 hypothetical protein; Provisional
Probab=99.76 E-value=1.5e-15 Score=155.51 Aligned_cols=356 Identities=13% Similarity=0.091 Sum_probs=210.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+... +.+ .-..+.+..+++.+.+..+. ..+.++++++++++.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~-~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGsEAv 125 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCT-VAP-AHANDARSEAARLIAERAPG--DLSKVFFTNGGADAN 125 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCC-cCC-ccCCHHHHHHHHHHHHhCCC--CCCEEEEcCChHHHH
Confidence 3688899998886 33444 68899999999876332 212 22345566677777654431 236899999999999
Q ss_pred HHHHHHhcC-CC-CeEEEcCCCCCChHHHHHHc-CCE-----------EEEecCCCCC--CCc--CC-------HHHHHh
Q 012095 169 LQAVLAVCS-PG-DEVIIPAPFWVSYPEMARIA-DAT-----------PVILPTRISE--NFL--LD-------PKVLES 223 (471)
Q Consensus 169 ~~~~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~~-G~~-----------~~~v~~~~~~--~~~--ld-------~e~l~~ 223 (471)
..+++.... .| ..|+....+|++....+... |.. +..++..... .|. -| ++.+++
T Consensus 126 e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~ 205 (451)
T PRK06062 126 EHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLER 205 (451)
T ss_pred HHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHH
Confidence 998886431 33 67888888888776443322 111 1122211100 010 12 567777
Q ss_pred hhc----cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe
Q 012095 224 KLT----EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (471)
Q Consensus 224 ~l~----~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (471)
.+. ++..+|++...+.-.|.. .+++.+++|.++|++| |+++|.||++..|--.|.. .....+.-..| +-
T Consensus 206 ~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~-~a~~~~gv~PD----i~ 279 (451)
T PRK06062 206 VIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH-GIVLIADEVMAGFGRTGKW-FAIEHFGVVPD----LI 279 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeeccccCCCcCcHH-HHHHhcCCCCC----ee
Confidence 774 234455554445556655 5788999999999999 9999999999975322211 01111111112 45
Q ss_pred cCCcccCccch-hheeeEcCHHHHHHHHHH--HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH-HHHHHHHHHH
Q 012095 299 GFSKAFAMTGW-RLGYIAGPKHFVAACNKI--QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF-RERRDFLVKS 374 (471)
Q Consensus 299 S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~--~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~-~~~r~~l~~~ 374 (471)
+|+|.+| .|+ .+|.+++++++++.+... ....+++.++++.+++.+.|+.-.. ++.+++..+.= +..++.|.+.
T Consensus 280 t~gK~lg-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~~~G~~~l~~~L~~l 357 (451)
T PRK06062 280 TFAKGVN-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEE-EGIVENAARIGAEVLGPGLREL 357 (451)
T ss_pred eechhhh-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHH
Confidence 6899998 784 899999999999887532 2334677889999999888874211 11122221111 1222233332
Q ss_pred hcCCCCCeeeCCCcceEEeEecCCccC-Cc--ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHH
Q 012095 375 FGELEGVKMSEPQGAFYLFIDFSTYYG-SE--AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLT 449 (471)
Q Consensus 375 L~~~~g~~~~~p~~g~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e 449 (471)
..+.+.+.-+...| +++-+.+..... .. ............+.+.|+++ ||++.+. .+.+|++.. .+++
T Consensus 358 ~~~~~~v~~vrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gvl~~~~-----~~~lrl~ppl~~t~~ 430 (451)
T PRK06062 358 AERHPSVGEVRGLG-VFWALELVADRETREPLAPYGASSAAMAAVKAACKER-GLLPFVN-----GNRIHVVPPCTVTED 430 (451)
T ss_pred HhcCCcEEeEeccc-cEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHC-CcEEeec-----CCEEEEECCccCCHH
Confidence 23333222223344 334445431100 00 00000000134677777765 9987652 257899874 4999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 012095 450 TLQAAVERIKKGLLTLR 466 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~~~ 466 (471)
+|++++++|+++++++.
T Consensus 431 eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 431 EVREGLAILDAALAVAD 447 (451)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998764
No 303
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.76 E-value=2e-15 Score=154.50 Aligned_cols=347 Identities=13% Similarity=0.049 Sum_probs=212.9
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+..+.. ...-..+....+++.+.+..+. .-+.++++++++++.
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGseAv 127 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAM-LAGCTHEPAIELAERLAALTGG--TLGHAFFASDGASAV 127 (453)
T ss_pred CCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCCHHHH
Confidence 3688899998885 34444 7889999999987632111 1111235556677777655432 225899999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHH-cCC------------EEEEecCCCCCC--Cc--------CC
Q 012095 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARI-ADA------------TPVILPTRISEN--FL--------LD 217 (471)
Q Consensus 169 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~-~G~------------~~~~v~~~~~~~--~~--------ld 217 (471)
..+++... .+| ..|+....+|++....+.. .|- .+..++.....+ +. -+
T Consensus 128 e~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 207 (453)
T PRK06943 128 EIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARA 207 (453)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHH
Confidence 99888752 133 6788888888876532221 111 122233221100 00 13
Q ss_pred HHHHHhhhc---cCCcEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~---~~~~~i~i~~-p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+|++.- .+.-.|. ..+++.++++.++|++| |+++|.||++..+-..|.. .....+.-..|
T Consensus 208 ~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~-gillI~DEV~TG~GRtG~~-fa~~~~gv~PD 285 (453)
T PRK06943 208 LADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY-GVHLIADEIAVGCGRTGTF-FACEQAGVWPD 285 (453)
T ss_pred HHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCCCcch-hHHHhCCCCCC
Confidence 466777664 3455666544 2555665 67899999999999999 9999999999876322321 11111111112
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~ 365 (471)
+-+|+|.++ .| +.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.-.. ++ +.+..+
T Consensus 286 ----ivt~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~-~~----l~~~~~ 355 (453)
T PRK06943 286 ----FLCLSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAE-DD----VLARNA 355 (453)
T ss_pred ----eEeeehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHh-cC----HHHHHH
Confidence 344689998 88 599999999999987753 12334667899999999988875211 12 223333
Q ss_pred HHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012095 366 ERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 442 (471)
Q Consensus 366 ~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi 442 (471)
++-+++.+.|++ .+++.-+... |+++-+.+...... . ......+.+.++++ ||++.+.. +.+|+
T Consensus 356 ~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gvel~~~~~~---~---~~~~~~i~~~~~~~-Gll~~~~g-----~~l~~ 422 (453)
T PRK06943 356 RKSARLRAALAPLAAHPQVRHLRQR-GTIFAFDVALDGDA---A---RTFSRRFFEAALER-ELLLRPIG-----TTVYL 422 (453)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEecc-ccEEEEEEccCCCc---c---hHHHHHHHHHHHHC-CcEEEecC-----CEEEE
Confidence 333344444433 3444433333 44455555311000 0 00135677777765 99987742 35899
Q ss_pred E--eecCHHHHHHHHHHHHHHHHhhC
Q 012095 443 S--YAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 443 s--~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+ +..++++|++++++|+++++++.
T Consensus 423 ~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 423 MPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 8 44599999999999999998763
No 304
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.76 E-value=1.4e-15 Score=149.59 Aligned_cols=216 Identities=18% Similarity=0.186 Sum_probs=158.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v 206 (471)
++....|.+.++++- ..++.+.++++..|+..++.+++++||.|++++..|.+.... .+..|.++.++
T Consensus 62 nPT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 62 NPTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred CccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 344566777777763 357889999999999999999999999999999999877654 45678888877
Q ss_pred cCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 207 PTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
+. .+.+.+++++. +++++|++.+|.|||..+.+ +.+|+++|+++ ++++|+|+.|..-.+
T Consensus 134 d~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~-g~~vvVDNTfatP~~--------- 193 (396)
T COG0626 134 DP-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAY-GALVVVDNTFATPVL--------- 193 (396)
T ss_pred CC-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhc-CCEEEEECCcccccc---------
Confidence 63 25667777776 59999999999999999999 99999999999 899999999975222
Q ss_pred cCCCCCCceEEEecCCcccCccc--hhheeeEcCH-HHHHHHHHHHh-cccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTG--WRLGYIAGPK-HFVAACNKIQS-QFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G--~R~G~v~~~~-~~i~~l~~~~~-~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
+-+-..+-.|++.|.+|.++ .. .=.|.++++. ++.+.+..... .....++++..+.+..-|+ -+.-+.
T Consensus 194 q~PL~~GaDIVvhSaTKyl~-GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-------TL~~Rm 265 (396)
T COG0626 194 QRPLELGADIVVHSATKYLG-GHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR-------TLALRM 265 (396)
T ss_pred cChhhcCCCEEEEecccccc-CCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-------hHHHHH
Confidence 11111345599999999996 33 3347677655 45555433333 4666677777555444333 355566
Q ss_pred HHHHHHHHHHHHHhcCCCCCe
Q 012095 362 KAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~ 382 (471)
++..++...+.+.|.+.|.++
T Consensus 266 ~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 266 ERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred HHHHHHHHHHHHHHhcCCCeE
Confidence 667778888888888877664
No 305
>PRK12403 putative aminotransferase; Provisional
Probab=99.76 E-value=1.9e-15 Score=155.21 Aligned_cols=356 Identities=12% Similarity=0.063 Sum_probs=206.3
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+... ++.. .+..+....+++.+.+..+. ..+.++++++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~-~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA 127 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY-YNMFFHTTHPAVIELSELLFSLLPG--HYSHAIYTNSGSEA 127 (460)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCC-eecccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHH
Confidence 3688899988775 23444 68899999999876322 1111 23456667777777655442 23689999999999
Q ss_pred HHHHHHHhc-------CCCCe-EEEcCCCCCChH-HHHHHcCCE-----------EEEecCCC--CCCCcC--------C
Q 012095 168 ILQAVLAVC-------SPGDE-VIIPAPFWVSYP-EMARIADAT-----------PVILPTRI--SENFLL--------D 217 (471)
Q Consensus 168 l~~~~~~l~-------~~gd~-Vlv~~p~y~~~~-~~~~~~G~~-----------~~~v~~~~--~~~~~l--------d 217 (471)
...+++... ++++. |+...-+|++.. ......|.. +..+|... ..++.. +
T Consensus 128 ~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 207 (460)
T PRK12403 128 NEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRA 207 (460)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHH
Confidence 999988763 23344 445555676653 333333322 22222110 000011 1
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
.+.+++.+. ++..+|++...+.-.|. ..+++.+++|.++|++| |+++|.||++..+--.|.. .....+.-..|
T Consensus 208 ~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGRtG~~-~a~e~~gv~PD 285 (460)
T PRK12403 208 ALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY-DVLLCADEVIGGFGRTGEW-FAHEHFGFEPD 285 (460)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hhhhhcCCCCC
Confidence 345655542 23445555444555675 46788999999999999 9999999999876322321 11111111112
Q ss_pred ceEEEecCCcccCccch-hheeeEcCHHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHH-HHHHH
Q 012095 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRE 366 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~-~~~~~ 366 (471)
|+ +|+|.+| .|. .+|.+++++++.+.+... ....+++.++++.+++.+.|+.-.. +..+++.. ..-+.
T Consensus 286 --iv--~~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~-~~l~~~~~~~~g~~ 359 (460)
T PRK12403 286 --TL--SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRD-EGVVTRVKDDTGPY 359 (460)
T ss_pred --eE--EEccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 33 4899998 784 899999999998877531 1234667899999999988874211 12233332 22222
Q ss_pred HHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCC-CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee
Q 012095 367 RRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA 445 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~ 445 (471)
.++.+.+...+.+-+.-+... |.++.+.+... .......... .....+...++++ ||.+.+.. +.+|++..
T Consensus 360 l~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~-----~~~~l~Pp 431 (460)
T PRK12403 360 LQRCLREVFGDHPLVGEVQGA-GLVAALQFAED-KATRKRFANENDLAWRCRTIGFEE-GVIIRSTL-----GRMIMAPA 431 (460)
T ss_pred HHHHHHHHHhcCCCEEeEeec-ceEEEEEEccC-ccccccccchhHHHHHHHHHHHhC-CEEEEecC-----CEEEEECC
Confidence 333333333334322222333 44455555321 0000000000 0122344555665 99987531 35888888
Q ss_pred c--CHHHHHHHHHHHHHHHHhhC
Q 012095 446 A--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 446 ~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
. ++++++++++.|+++++++.
T Consensus 432 l~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 432 LVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 7 99999999999999998874
No 306
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.76 E-value=1.2e-15 Score=154.92 Aligned_cols=340 Identities=12% Similarity=0.062 Sum_probs=210.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+|+.+++.+..+.. ...-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~SGsEAv 116 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHPPAIELCRKLVAMTPQ--PLECVFLADSGSVAV 116 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcc-ccccCCHHHHHHHHHHHhhCCC--CcCEEEEeCCcHHHH
Confidence 3688899998876 33333 6889999999887632211 1111345566677777655431 236899999999999
Q ss_pred HHHHHHhcC------C-CCeEEEcCCCCCChHHHHHHc-CCE-------------EEEecCCCCC---CC-cCCHHHHHh
Q 012095 169 LQAVLAVCS------P-GDEVIIPAPFWVSYPEMARIA-DAT-------------PVILPTRISE---NF-LLDPKVLES 223 (471)
Q Consensus 169 ~~~~~~l~~------~-gd~Vlv~~p~y~~~~~~~~~~-G~~-------------~~~v~~~~~~---~~-~ld~e~l~~ 223 (471)
+.+++.... . ..+|+....+|++....+... +.. ++.+|..... .+ .-|++++++
T Consensus 117 e~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~ 196 (428)
T PRK07986 117 EVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFAR 196 (428)
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHH
Confidence 988886532 2 367888899888754332221 211 1222221100 01 125677777
Q ss_pred hhcc---CCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe
Q 012095 224 KLTE---KSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (471)
Q Consensus 224 ~l~~---~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (471)
.+.. +..+|++... +.-.|. ..+++.+++|.++|++| ++++|+||++..+-..|.. .......-..| |+
T Consensus 197 ~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~-g~lLI~DEv~tG~GrtG~~-fa~~~~gv~PD--i~-- 270 (428)
T PRK07986 197 LMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE-GILLIADEIATGFGRTGKL-FACEHAGIAPD--IL-- 270 (428)
T ss_pred HHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCCe-eeecccCCCCC--EE--
Confidence 7742 3345555442 444564 55779999999999999 9999999999765222221 11111111112 33
Q ss_pred cCCcccCccc-hhheeeEcCHHHHHHHHHH-----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH
Q 012095 299 GFSKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (471)
Q Consensus 299 S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (471)
+|+|.++ .| +.+|.+++++++++.+... ....+++.++++.+++.+.|+.- ++ .++.++.+++-+++.
T Consensus 271 t~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i---~~--~~~~~~~~~~g~~l~ 344 (428)
T PRK07986 271 CLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLL---ES--GDWQQQVAAIEAQLR 344 (428)
T ss_pred Eechhhh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHH
Confidence 5899997 78 5889999999999988642 13346667899988888888741 11 123344444444455
Q ss_pred HHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cC
Q 012095 373 KSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--AS 447 (471)
Q Consensus 373 ~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~ 447 (471)
+.|+++ +.+.-+... |.++-+.+... .....+.+.|+++ ||++.+.. +.+|+... .+
T Consensus 345 ~~l~~l~~~~~i~~vRg~-Gl~~~ve~~~~-----------~~~~~~~~~l~~~-Gl~~~~~g-----~~i~~~Ppl~it 406 (428)
T PRK07986 345 EELAPLRDAPMVADVRVL-GAIGVVETTRP-----------VNMAALQRFFVEQ-GVWIRPFG-----KLIYLMPPYIIL 406 (428)
T ss_pred HHHHHHhcCCCEEeEecc-ceEEEEEeCCc-----------ccHHHHHHHHHHC-CcEEEecC-----CEEEEeCCCCCC
Confidence 555443 323222222 44455555432 1356788888766 99998742 47899655 49
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012095 448 LTTLQAAVERIKKGLLT 464 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~ 464 (471)
++++++++++|.+++++
T Consensus 407 ~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 407 PEQLQRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999999864
No 307
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=2.3e-15 Score=154.12 Aligned_cols=349 Identities=16% Similarity=0.149 Sum_probs=206.9
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+... ........+....+++.+.+..+ ...+.+.+++++++|.
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA~ 126 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQH-SMIGYTHSERAIRVAEKLAEISP--IENPKVLFGLSGSDAV 126 (457)
T ss_pred CCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccc-cccCccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHH
Confidence 3688899998886 34444 78899999999875321 11111113444556666655433 1236899999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHH-cCC-------------EEEEecCCCCCC--Cc----CCH--------
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARI-ADA-------------TPVILPTRISEN--FL----LDP-------- 218 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~-~G~-------------~~~~v~~~~~~~--~~----ld~-------- 218 (471)
..+++... .....|+....+|++....+.. .|. .++.+|...... +. -+.
T Consensus 127 e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (457)
T PRK05639 127 DMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFL 206 (457)
T ss_pred HHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHH
Confidence 98888653 2235788888888876543322 221 123333321100 00 022
Q ss_pred HHHHhhh------ccCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 219 KVLESKL------TEKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 219 e~l~~~l------~~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
+.+++.+ .++..+|++.-.+.-.|. ..+++.+++|.++|++| ++++|.||++..+-..|.. .....+.-..
T Consensus 207 ~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~P 284 (457)
T PRK05639 207 DYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH-GILLVMDEVQTGIGRTGKW-FASEWFEVKP 284 (457)
T ss_pred HHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCcCchH-HHHHhcCCCC
Confidence 2344443 124455555444555675 56788999999999999 9999999999875323321 1111111111
Q ss_pred CceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
| |++ |+|.+| .|..+|.+++++++++.... ....+++.++++.+++.+.|+.- ++ +...+..+++-+++
T Consensus 285 D--iv~--~gK~l~-gG~pi~av~~~~~i~~~~~~-~~~~T~~g~p~~~aaa~a~l~~l---~~--~~l~~~~~~~g~~l 353 (457)
T PRK05639 285 D--LII--FGKGVA-SGMGLSGVIGRKELMDLTSG-SALLTPAANPVISAAAEATLEII---EE--ENLLKNALKVGEFI 353 (457)
T ss_pred C--EEE--echhhc-CCCcceeEEehHHHHhhcCC-CcccCCCcCHHHHHHHHHHHHHH---HH--ccHHHHHHHHHHHH
Confidence 2 333 899998 78999999999999883221 12346678888888888888641 11 12223333344444
Q ss_pred HHHhcC----CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-
Q 012095 372 VKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 446 (471)
Q Consensus 372 ~~~L~~----~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~- 446 (471)
.+.|++ .+-+.-+... |.++.+.+-..... ........+.+.++++ ||++.+... ..+.+|++...
T Consensus 354 ~~~L~~l~~~~~~~~~VrG~-Gl~~gve~~~~~~~-----~~~~~~~~~~~~~~~~-Gv~~~~~g~--~~~~lr~~Ppl~ 424 (457)
T PRK05639 354 KKRLLEMKESFEVIGDVRGK-GLMIGVEIVKENGK-----PDPELTGKICWRAFEL-GLILPSYGM--FGNVIRITPPLV 424 (457)
T ss_pred HHHHHHHHHhCCCEEeeccc-eeEEEEEEecCCCC-----CCHHHHHHHHHHHHhC-CeEEeecCC--CCCEEEEeCCCc
Confidence 444443 3212212233 44455454211000 0000235677777775 999876421 14689998875
Q ss_pred -CHHHHHHHHHHHHHHHHhh
Q 012095 447 -SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l~~~ 465 (471)
+++++++++++|.++++++
T Consensus 425 it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 425 ITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765
No 308
>PRK06105 aminotransferase; Provisional
Probab=99.76 E-value=1.6e-15 Score=155.78 Aligned_cols=353 Identities=13% Similarity=0.056 Sum_probs=212.0
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+|+.+++.+............+.+..+++.+.+..+. .-+.++++++++++.
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseAv 122 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPV--PMSKVFFTNSGSEAN 122 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 3688899998886 34444 788999999998763211111122345566677777655432 236899999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHc-CCE------------EEEecCCCCCCCc-----------C
Q 012095 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIA-DAT------------PVILPTRISENFL-----------L 216 (471)
Q Consensus 169 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~-G~~------------~~~v~~~~~~~~~-----------l 216 (471)
..+++... .+| ..|+...-+|++....+... |.. +..++......+. .
T Consensus 123 e~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06105 123 DTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATR 202 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHH
Confidence 99988742 133 56888888887765332211 111 1122211100000 0
Q ss_pred CHHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 217 DPKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 217 d~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
..+++++.+. ++..+|++...+.-.|. ..+++.+++|.++|++| ++++|.||++..+--.|.. ..+....-..
T Consensus 203 ~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~-~~llI~DEv~tG~GRtG~~-f~~~~~~v~P 280 (460)
T PRK06105 203 LANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY-DILLVADEVICGFGRTGNM-FGCETFGIKP 280 (460)
T ss_pred HHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCeEEEeccccCCCcCchh-hhHHhcCCCC
Confidence 1355666663 23455555444555565 46899999999999999 9999999999766322321 1111111111
Q ss_pred CceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
| +-+|+|.++ .| +.+|.+++++++++.+... ....+++.++++..++.+.|+.-. + +++.+.
T Consensus 281 D----i~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~---~--~~l~~~ 350 (460)
T PRK06105 281 D----ILVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIE---E--RDLVGN 350 (460)
T ss_pred C----eeeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHH---h--ccHHHH
Confidence 2 446899998 66 6899999999998877532 123567789999998888887421 1 123344
Q ss_pred HHHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012095 364 FRERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTC 439 (471)
Q Consensus 364 ~~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~ 439 (471)
.++.-+++.+.|++ .+-+.-+... |+++-+.+....... ..+.. ......+...++++ ||.+.+. .+.
T Consensus 351 v~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~-~~~~~~~~~a~~i~~~~~~~-Gvl~~~~-----g~~ 422 (460)
T PRK06105 351 AAERGARLQARLRALADHPLVGEVRGV-GLIAAVELVADKATK-TPFEPPGKVGARANAAAHEH-GVISRAM-----GDT 422 (460)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEec-ceEEEEEEecCcccC-CCCCchhHHHHHHHHHHHHC-CeEEEec-----CCE
Confidence 44444444444444 3222222233 444445552210000 00000 00124677777765 9999873 247
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 440 IRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 440 iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+|++... +++++++++++|.++++++.
T Consensus 423 i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 423 LAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 8998765 99999999999999998753
No 309
>PRK07481 hypothetical protein; Provisional
Probab=99.75 E-value=2.9e-15 Score=153.48 Aligned_cols=352 Identities=15% Similarity=0.144 Sum_probs=209.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+|+.+++.+..+.........+.+..+++.+.+..+. -..+.++++++++++..
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~-~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAP-EGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCC-CCCCEEEEcCchHHHHH
Confidence 688899998775 33444 688999999998763321100112345566677777655431 12468999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCC--CCCc-CCHHHH----
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRIS--ENFL-LDPKVL---- 221 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~--~~~~-ld~e~l---- 221 (471)
.+++.... +| ..|+....+|++....+..... .+..++.... ..|+ -|++.+
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 88886431 34 5788888888886543322211 1122221100 0111 133333
Q ss_pred ----Hhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCC
Q 012095 222 ----ESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 291 (471)
Q Consensus 222 ----~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~ 291 (471)
++.+. +++.+|++...+.-.|. ..+++.++++.++|++| |+++|.||++..+...|... .....+.+
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~P-- 275 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH-GILLIADEVVTGFGRTGSWFGSRGWGVKP-- 275 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCcCchhhHhhhcCCCC--
Confidence 33332 23455655444554565 56888999999999999 99999999998763333211 11111221
Q ss_pred CceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
| +-+++|.++ .| +.+|.+++++++++.+... ....+++.++++.+++.+.|+.- ++ +.+.++
T Consensus 276 D----iv~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l---~~--~~l~~~ 345 (449)
T PRK07481 276 D----IMCLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIV---VR--EDLPAN 345 (449)
T ss_pred C----EEEEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHH---Hh--hhHHHH
Confidence 2 444789998 78 5999999999999887531 23346778999998888888741 11 122333
Q ss_pred HHHHHHHHHHHhcC----CCCCeeeCCCcceEEeEecCCccCCcccCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012095 364 FRERRDFLVKSFGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDT 438 (471)
Q Consensus 364 ~~~~r~~l~~~L~~----~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~ 438 (471)
.++.-+++.+.|++ .+-+.-.... |.++.+.+....... .... .......+.+.++++ ||++.+.. +
T Consensus 346 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gvl~~~~g-----~ 417 (449)
T PRK07481 346 AAKRGAYLLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATR-EPIDPSKGYANAVADVAREN-GVLVRPSG-----T 417 (449)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEeec-ceEEEEEeccccccc-CCCCchhHHHHHHHHHHHhC-CeEEEecC-----C
Confidence 33344444444433 3222222333 444555553210000 0000 000134566777765 99998742 3
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 439 CIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 439 ~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+||+... ++++|++++++|.++++++.
T Consensus 418 ~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 418 KIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 58898654 99999999999999998764
No 310
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.75 E-value=8.9e-16 Score=149.08 Aligned_cols=214 Identities=16% Similarity=0.138 Sum_probs=157.5
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~ 209 (471)
...|.+.+++.. ...+.++++++..|+..++..|+.+|+.|+..+..|......+ ...|++...+.++
T Consensus 79 ~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~ 150 (409)
T KOG0053|consen 79 RDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD 150 (409)
T ss_pred hHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence 455666666653 3456888888898999999999999999999999999887654 4678888877653
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
+++.+++++.+++++||+.+|.||+..+.+ +++|.++|+++ |++|++|+.+....+ .....+
T Consensus 151 -------~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~-g~~vvVDnTf~~p~~-----~~pL~l-- 212 (409)
T KOG0053|consen 151 -------DLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKY-GFLVVVDNTFGSPYN-----QDPLPL-- 212 (409)
T ss_pred -------hHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhC-CCEEEEeCCcCcccc-----cChhhc--
Confidence 788999999999999999999999999999 99999999999 999999999975321 112222
Q ss_pred CCCceEEEecCCcccC-ccchhheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFA-MTGWRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g-~~G~R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
+-.|++.|.+|.+| -.-.=.|.++.+ .++.+.+...+.....+++++.......-|. .+.-+.++..++
T Consensus 213 --GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk-------tl~lRi~~~~en 283 (409)
T KOG0053|consen 213 --GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK-------TLHLRINKHSEN 283 (409)
T ss_pred --CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc-------hhhhhHHHHHHH
Confidence 34499999999995 222445778885 8999999988888888888886544333332 222233334444
Q ss_pred HHHHHHHhcCCCCCe
Q 012095 368 RDFLVKSFGELEGVK 382 (471)
Q Consensus 368 r~~l~~~L~~~~g~~ 382 (471)
...+.+.|++.|.++
T Consensus 284 a~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 284 ALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHhhhCCcee
Confidence 444555555544443
No 311
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.75 E-value=3.2e-15 Score=152.85 Aligned_cols=346 Identities=16% Similarity=0.123 Sum_probs=212.2
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+++||+..|. ..++. ++.+.+++.+++.+..+ ++...-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 46 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~-~~~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAv 122 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDY-APAFQMGHPLAFELAERLAELAPG--GLDHVFFTNSGSESV 122 (445)
T ss_pred CCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 3688899998885 33444 78899999998875221 111111234555677777654431 236899999999999
Q ss_pred HHHHHHhcC-------C-CCeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCC---CCCCcC--------
Q 012095 169 LQAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRI---SENFLL-------- 216 (471)
Q Consensus 169 ~~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~---~~~~~l-------- 216 (471)
..+++.... + ...|+....+|++....+...+. .+..+|... ...+..
T Consensus 123 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (445)
T PRK09221 123 DTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAE 202 (445)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHH
Confidence 988886431 2 25788888888876533222111 122233211 000111
Q ss_pred CHHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 217 DPKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 217 d~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
.++.+++.+. ++..+|++...+...|. ..+++.+++|.++|++| |+++|.||++..+.-.|.. ..+....-..
T Consensus 203 ~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRtG~~-~~~~~~gv~P 280 (445)
T PRK09221 203 LADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH-GILLIFDEVITGFGRLGAA-FAAERFGVTP 280 (445)
T ss_pred HHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCCcCchh-hHHHhcCCCC
Confidence 1356666664 23445555545666776 45788899999999999 9999999999765322221 1111111111
Q ss_pred CceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
| +-+|+|.++ .| ..+|.+++++++++.+.. .....+++.++++..++.+.|+.- ++ +.+.++
T Consensus 281 D----i~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i---~~--~~l~~~ 350 (445)
T PRK09221 281 D----IITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIY---RE--EDLFER 350 (445)
T ss_pred C----EEEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHH---Hh--ccHHHH
Confidence 2 457899997 66 689999999999887743 123356678999988888888741 11 134555
Q ss_pred HHHHHHHHHHHhcCCCC---CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 364 FRERRDFLVKSFGELEG---VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g---~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
.++.-+++.+.|+++.+ +.-+... |...-+.+..... .......++.+.|+++ ||++.++. +.+
T Consensus 351 ~~~~g~~l~~~l~~l~~~~~v~~vrg~-Gl~~~v~~~~~~~------~~~~~~~~~~~~~~~~-Gv~~~~~~-----~~l 417 (445)
T PRK09221 351 AAELAPYFEDAVHSLKGLPHVIDIRNI-GLVAGIELAPRPG------APGARGYEAFMKCFEK-GLLVRYTG-----DTI 417 (445)
T ss_pred HHHHHHHHHHHHHhhccCCCEEEEecC-ceEEEEEEecccc------cccchHHHHHHHHHHC-CeEEeecC-----CEE
Confidence 66666666666665422 2212222 3434444432100 0001245778888776 99987642 579
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 441 RISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 441 Ris~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
|++... ++++|++++++|++++.++
T Consensus 418 r~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 999654 9999999999999998764
No 312
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=1.5e-15 Score=154.38 Aligned_cols=341 Identities=13% Similarity=0.048 Sum_probs=210.6
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.++|+..|. ..++. ++.+.+++.+++.+... +....-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseAv 117 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSH-IMFGGFTHEPAVELAQKLLEILPP--SLNKIFFADSGSVAV 117 (429)
T ss_pred CCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCC-ccccccCCHHHHHHHHHHHhhCCC--CcCEEEEeCCchHHH
Confidence 3688899998875 33333 68899999998876321 111111234555666666554331 346999999999999
Q ss_pred HHHHHHhcC-------CC-CeEEEcCCCCCChHHHHH-HcCC-------------EEEEecCCCCC---CC-cCCHHHHH
Q 012095 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMAR-IADA-------------TPVILPTRISE---NF-LLDPKVLE 222 (471)
Q Consensus 169 ~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~-~~G~-------------~~~~v~~~~~~---~~-~ld~e~l~ 222 (471)
..+++.... +| ..|+....+|++....+. ..|. .+..+|..... .+ .-+++.++
T Consensus 118 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~ 197 (429)
T PRK06173 118 EVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQ 197 (429)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHH
Confidence 988886531 33 568888888887532221 1111 11222221100 00 01466677
Q ss_pred hhhc---cCCcEEEEcCC-CCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 223 SKLT---EKSRLLILCSP-SNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 223 ~~l~---~~~~~i~i~~p-~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
+.+. ++..+|++... +.-.|.. .+++.+++|.++|++| |+++|.||++..+-..|.. .......-..| |+
T Consensus 198 ~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD--iv- 272 (429)
T PRK06173 198 DLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY-GVLLIFDEIATGFGRTGKL-FALEHAGVVPD--IM- 272 (429)
T ss_pred HHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc-CCeEEecchhcCCCcCCcc-hHHHhcCCCCC--EE-
Confidence 7774 24455555442 5656754 7889999999999999 9999999999765222221 01111111112 33
Q ss_pred ecCCcccCccc-hhheeeEcCHHHHHHHHH-----HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 298 NGFSKAFAMTG-WRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 298 ~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
+|+|.++ .| +.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.- ++ +...++.+++-+++
T Consensus 273 -~~gK~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i---~~--~~~~~~~~~~g~~l 345 (429)
T PRK06173 273 -CIGKALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLL---LE--SPWQQNIQRIEAQL 345 (429)
T ss_pred -Eeehhhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHH
Confidence 3899997 78 478889999999888753 122235567888888888888741 11 12344455555556
Q ss_pred HHHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--
Q 012095 372 VKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-- 446 (471)
Q Consensus 372 ~~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-- 446 (471)
.+.|+++ +.+.-... -|..+-+.+... .+...+.+.|+++ ||++.+.. +.+|+....
T Consensus 346 ~~~L~~~~~~~~v~~vRg-~Gl~~~iel~~~-----------~~~~~i~~~l~e~-Gi~v~~~g-----~~l~~~Ppl~i 407 (429)
T PRK06173 346 KQELAPAAEFDSVAEVRV-LGAIGVVEMKEP-----------VNMATLQPRFVEH-GIWVRPFG-----KLVYIMPPFII 407 (429)
T ss_pred HHHHHHhhcCCCeeeeec-cceEEEEEeCCc-----------ccHHHHHHHHHHC-CeEEEecC-----CEEEEeCCccC
Confidence 6655543 22211122 344455666432 1356788888776 99997742 479998775
Q ss_pred CHHHHHHHHHHHHHHHHhh
Q 012095 447 SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~l~~~ 465 (471)
+++++++++++|++++.++
T Consensus 408 t~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 408 SPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999764
No 313
>PRK04311 selenocysteine synthase; Provisional
Probab=99.75 E-value=3.9e-15 Score=151.68 Aligned_cols=316 Identities=21% Similarity=0.197 Sum_probs=196.8
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---CC--CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeE
Q 012095 109 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 182 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~V 182 (471)
.|+.+.+++.+++.... ..|... .| +..+++.+++++ | .++.+++++++.++..++.+ +.+||+|
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~----G----ae~a~vv~sgtaAl~l~l~~-l~~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT----G----AEDALVVNNNAAAVLLALNA-LAAGKEV 168 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh----C----CCeEEEECCHHHHHHHHHHH-hCCCCEE
Confidence 47888999988875421 122211 12 135555555554 4 34677888888999888865 5799999
Q ss_pred EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC--cc--cCCCHHHHHH
Q 012095 183 IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP--TG--SVYPKNLLDE 252 (471)
Q Consensus 183 lv~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP--tG--~~~~~~~l~~ 252 (471)
++++..+.. ....++..|++++.++... ..++++++++++++|++|++.+++|| +| ...+ +++
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l~e 241 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---LAE 241 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---HHH
Confidence 998864431 2345678899999998642 24799999999999999999999998 34 4567 999
Q ss_pred HHHHHHhCCCeEEEEccCCCcc----ccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH--
Q 012095 253 IARIVAKHPRLLVLSDEIYEHI----IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-- 326 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~----~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~-- 326 (471)
|+++|++| ++++|+|...+.+ .++-...+.+... ...+-.+++.|.+|.+| |-..|++++++++++++++
T Consensus 242 I~~lak~~-gi~vivD~gsG~l~~~~~~gl~~~p~~~~~-l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li~~l~~~~ 317 (464)
T PRK04311 242 LAALGKEH-GLPVVYDLGSGSLVDLSQYGLPDEPTVQEL-LAAGVDLVTFSGDKLLG--GPQAGIIVGKKELIARLKKHP 317 (464)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCCchhhH-HhcCCcEEEecCccccc--CCceEEEEEcHHHHHHHhhch
Confidence 99999999 9999999965433 1210111222221 11355699999999986 3358999999999988763
Q ss_pred HHhcccCCCChHHHHHHHHHHhccCC-Ch--------HHHHHHHHHHHHHHHHHHHHhcCCC--CC--eeeCC----Cc-
Q 012095 327 IQSQFTSGASSISQKAGVAALGLGYA-GG--------EVVSKMVKAFRERRDFLVKSFGELE--GV--KMSEP----QG- 388 (471)
Q Consensus 327 ~~~~~~~~~~~~~q~aa~~~L~~~~~-~~--------~~~~~~~~~~~~~r~~l~~~L~~~~--g~--~~~~p----~~- 388 (471)
+.+... .......+..+.|..... .. ..+....++..++.+.+.+.|.+.+ ++ ++.+. .|
T Consensus 318 ~~r~lr--~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg 395 (464)
T PRK04311 318 LKRALR--VDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGG 395 (464)
T ss_pred hHHHHh--cchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCC
Confidence 222221 223333333333331000 01 1123334566677888888887753 32 33321 11
Q ss_pred --------ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHc-CCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHH
Q 012095 389 --------AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-AQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERI 458 (471)
Q Consensus 389 --------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~-~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l 458 (471)
++-+.++... .+..++.++|.+- -.|+.+. .++.+.+.+.+ .+++++..+++|
T Consensus 396 s~p~~~~~~~~v~~~~~~------------~~~~~l~~~lr~~~~~i~~r~-----~~~~~~ld~r~~~~~~~~~~~~~~ 458 (464)
T PRK04311 396 SLPVDRLPSAAVTLTPKD------------RSLEALAARLRLLPPPVIGRI-----EDGRLLLDLRTLEEEDEERLAAAL 458 (464)
T ss_pred CCcCCCCCeEEEEEeCCC------------CCHHHHHHHHhcCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHH
Confidence 1222222211 2567888876532 1244432 35678888887 888999999999
Q ss_pred HHHHH
Q 012095 459 KKGLL 463 (471)
Q Consensus 459 ~~~l~ 463 (471)
.+++.
T Consensus 459 ~~~~~ 463 (464)
T PRK04311 459 LEALN 463 (464)
T ss_pred HHHhh
Confidence 88753
No 314
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=3e-15 Score=153.55 Aligned_cols=348 Identities=14% Similarity=0.129 Sum_probs=208.4
Q ss_pred cCCCeEEcCCCC-CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 93 AGVSVIRLAAGE-PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
.|+.+||+..+. ..++. +|.+.+++.+++.+.. +....-..+.+..+++.+.+..+. ..+.+++++++++++..
T Consensus 70 dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseAve~ 145 (459)
T PRK06082 70 DGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLP--FSPRRFTNETAIECAEKLTEIAGG--ELNRVLFAPGGTSAIGM 145 (459)
T ss_pred CCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCC--CccCccCCHHHHHHHHHHHHhCCC--CCCEEEECCCcHHHHHH
Confidence 688899987432 33453 7889999999987532 222222346666777777665542 23689999999999998
Q ss_pred HHHHhcC-C-CCeEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCC--CCc-C------CHHHHHhhhc
Q 012095 171 AVLAVCS-P-GDEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISE--NFL-L------DPKVLESKLT 226 (471)
Q Consensus 171 ~~~~l~~-~-gd~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~--~~~-l------d~e~l~~~l~ 226 (471)
+++.... . ...|+....+|++... .....|.. +..+|..... .|. . +++.+++.+.
T Consensus 146 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 225 (459)
T PRK06082 146 ALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIE 225 (459)
T ss_pred HHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHh
Confidence 8876531 2 3678888888877653 33222221 1222211000 010 0 1355777664
Q ss_pred c--CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 227 E--KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 227 ~--~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
. +..+|++...++..+...+++.+++|.++|++| |+++|.||++..+--.|.. .......-..| |+ +|+|.+
T Consensus 226 ~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tG~GRtG~~-fa~e~~gv~PD--iv--~~gKgl 299 (459)
T PRK06082 226 KEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH-NVLLIIDEIPNGMGRTGEW-FTHQAYGIEPD--IL--CIGKGL 299 (459)
T ss_pred cCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCCCccchh-hHhHhhCCCCC--EE--Eecccc
Confidence 2 344555544455556678889999999999999 9999999999875322321 01111111112 33 389999
Q ss_pred Cccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CC
Q 012095 305 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LE 379 (471)
Q Consensus 305 g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~ 379 (471)
| .| +.+|.+++++++.+.........+++.++++.+++.+.|+.- ++ +.+.++.+++-+++.+.|++ .+
T Consensus 300 ~-gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l---~~--~~l~~~~~~~g~~l~~~L~~l~~~~~ 373 (459)
T PRK06082 300 G-GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVI---EQ--EGLLEKVKADSQFMRERLLEMKAKYP 373 (459)
T ss_pred c-CCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 8 77 599999999887654321111257778999988888888741 11 12344444444555555444 32
Q ss_pred CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHH
Q 012095 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVER 457 (471)
Q Consensus 380 g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~ 457 (471)
-+.-+...| .++.+.+...... ... .......+...++++ ||++.+.. .+.+|++... ++++|++++++
T Consensus 374 ~i~~vrG~G-l~~~ve~~~~~~~--~~~-~~~~~~~~~~~~~~~-Gvl~~~~~----~~~i~~~Ppl~it~~eid~~~~~ 444 (459)
T PRK06082 374 LIGDVRGIG-LLWGVELVTDRHT--KER-AYDEAEAVLYRCLNN-GLSFKVSQ----GNVIQLSPPLIITREELTQALAI 444 (459)
T ss_pred Ceeeeeecc-ceeEEEEccCccc--cCc-cHHHHHHHHHHHHhC-CCEEEecC----CCEEEEeCCCccCHHHHHHHHHH
Confidence 222223344 4455555321000 000 000134567777765 99987732 3679998664 99999999999
Q ss_pred HHHHHHhh
Q 012095 458 IKKGLLTL 465 (471)
Q Consensus 458 l~~~l~~~ 465 (471)
+++++.++
T Consensus 445 l~~~l~~~ 452 (459)
T PRK06082 445 LEEAIAKI 452 (459)
T ss_pred HHHHHHHH
Confidence 99999775
No 315
>PLN02271 serine hydroxymethyltransferase
Probab=99.75 E-value=2.9e-15 Score=151.76 Aligned_cols=338 Identities=16% Similarity=0.096 Sum_probs=217.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CcEEEeCChH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTP--DQILVSNGAK 165 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~ 165 (471)
...|.|-..++.. .+.+.+++...+.+.+ -.|+....+.++.....++..+.||.+... -||-.- +++
T Consensus 148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs 224 (586)
T PLN02271 148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCT 224 (586)
T ss_pred hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHH
Confidence 3457776676653 5566676665554422 123334445567666677777778854332 355555 455
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCCChHHH---------HHHcCCEEEEec--CCCCCCCcCCHHHHHh-hhccCCcEEE
Q 012095 166 QSILQAVLAVCSPGDEVIIPAPFWVSYPEM---------ARIADATPVILP--TRISENFLLDPKVLES-KLTEKSRLLI 233 (471)
Q Consensus 166 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---------~~~~G~~~~~v~--~~~~~~~~ld~e~l~~-~l~~~~~~i~ 233 (471)
.|+..++.+|++|||+|+..+..|.++... +...|..+..++ ++. ....+|.+++++ +...+||+|+
T Consensus 225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~-~~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP-QTGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc-ccCccCHHHHHHHhhhcCCeEEE
Confidence 567778899999999999988777665432 233455544444 543 345699999998 5678999998
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+..-.|| ..++ +++|.++|+++ ++++++|.++......+...++.. ....++.+|.+|++ .|-|-|.
T Consensus 304 ~g~Sayp--r~~D---~~~i~eIAdev-GA~LmvD~AH~aGLIa~g~~~sP~-----~~aDvvt~TTHKtL--rGPrGG~ 370 (586)
T PLN02271 304 CGGSSYP--REWD---YARFRQIADKC-GAVLMCDMAHISGLVAAKECVNPF-----DYCDIVTSTTHKSL--RGPRGGI 370 (586)
T ss_pred ECchhcc--CcCC---HHHHHHHHHHc-CCEEEEECcccccccccCcCCCCC-----cCCcEEEeCCcccC--CCCCceE
Confidence 8666777 5677 88889999999 999999999986544332222111 12348999999997 5667788
Q ss_pred eEcCHH--------------------HHHHHHHHHhccc-CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH
Q 012095 314 IAGPKH--------------------FVAACNKIQSQFT-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (471)
Q Consensus 314 v~~~~~--------------------~i~~l~~~~~~~~-~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (471)
++.+++ +.+++.+...+.. .++.....++...++.+.. .....+..+...++.+.|.
T Consensus 371 I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~--~~efk~Ya~QVv~NAkaLA 448 (586)
T PLN02271 371 IFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVA--TPEYKAYMQQVKKNAQALA 448 (586)
T ss_pred EEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHh--ChHHHHHHHHHHHHHHHHH
Confidence 887653 4455544433322 2222222233333444211 1223667777788889999
Q ss_pred HHhcCCCCCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEeec
Q 012095 373 KSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYAA 446 (471)
Q Consensus 373 ~~L~~~~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----~~~~iRis~~~ 446 (471)
+.|.+. |+++.. ...+..+++++... + ..-..++++|++.||.+..-..++ .++.|||....
T Consensus 449 ~~L~~~-G~~vv~ggTdnHlvLvDl~~~-g----------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~a 516 (586)
T PLN02271 449 SALLRR-KCRLVTGGTDNHLLLWDLTTL-G----------LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPA 516 (586)
T ss_pred HHHHHC-CCeEeeCCCCcceeeecCccc-C----------CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHH
Confidence 999887 887753 33456788888543 1 233556667888899875543332 24679997653
Q ss_pred ------CHHHHHHHHHHHHHHHH
Q 012095 447 ------SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 447 ------~~e~i~~~~~~l~~~l~ 463 (471)
.++++++..+-|.++++
T Consensus 517 lT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 517 MTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHhcCCCcHHHHHHHHHHHHHHh
Confidence 56888888888888776
No 316
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=3e-15 Score=152.01 Aligned_cols=340 Identities=14% Similarity=0.084 Sum_probs=208.4
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+..+.. ...-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~ 113 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVM-FGGLTHEPAIKLTRKLLNLTDN--GLDHVFYSDSGSVSV 113 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHhhCCC--CcCEEEEeCCcHHHH
Confidence 3688899998886 33444 7899999999987632211 1011234455566666544331 236899999999999
Q ss_pred HHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCCCCCcC-C----HHHH
Q 012095 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRISENFLL-D----PKVL 221 (471)
Q Consensus 169 ~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~~~~~l-d----~e~l 221 (471)
..+++.... ++ ..|+....+|++....+... +. ....+|......... + .+.+
T Consensus 114 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 193 (422)
T PRK05630 114 EVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSL 193 (422)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHH
Confidence 988886431 33 56888888888754333221 11 122233221110000 1 2345
Q ss_pred HhhhccCCcEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 222 ESKLTEKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 222 ~~~l~~~~~~i~i~~-p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
++.+.++..+|++.- .+.-.|. ..+.+.+++|.++|++| ++++|.||++..+-..|.. .......-..| |+ +
T Consensus 194 ~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~-g~llI~DEv~tG~GrtG~~-~a~~~~gv~PD--i~--t 267 (422)
T PRK05630 194 ELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH-DILLIADEIATGFGRTGEL-FATLAAGVTPD--IM--C 267 (422)
T ss_pred HHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEecceeCCCcCchh-hHHHhcCCCCC--ee--e
Confidence 555555666666654 2665676 56788999999999999 9999999999776322221 11111111111 33 7
Q ss_pred CCcccCccc-hhheeeEcCHHHHHHHHHH------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH
Q 012095 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (471)
Q Consensus 300 ~SK~~g~~G-~R~G~v~~~~~~i~~l~~~------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (471)
|+|.++ .| ..+|++++++++.+.+... ....+++.++++..++.++|+.-.. +.+ .++.+++-+++.
T Consensus 268 ~gK~l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~-~~~----~~~~~~~g~~l~ 341 (422)
T PRK05630 268 VGKALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIET-GMW----RKQVKRIEAELI 341 (422)
T ss_pred eechhh-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHh-CcH----HHHHHHHHHHHH
Confidence 899986 67 4899999999999887531 2234667889998888888875211 122 223333334444
Q ss_pred HHhc---CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012095 373 KSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 447 (471)
Q Consensus 373 ~~L~---~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~ 447 (471)
+.|+ +.+.+.-+... |.++-+.+... .+...+.+.++++ ||++.+. + +.+|+.... +
T Consensus 342 ~~L~~l~~~~~v~~vRg~-Gl~~~ie~~~~-----------~~~~~~~~~~~~~-Gl~~~~~---g--~~l~~~PpL~it 403 (422)
T PRK05630 342 AGLSPLAHLPGVADVRVL-GAIGVVEMEQP-----------VDMEEATQAAVDH-GVWLRPF---G--RLVYVMPPYITT 403 (422)
T ss_pred HHHHHhhcCCCeeeeecc-ccEEEEEECCc-----------ccHHHHHHHHHHC-CeEEEec---C--CEEEEECCccCC
Confidence 4343 33333222223 44466666432 1355788887776 9998763 2 578988764 9
Q ss_pred HHHHHHHHHHHHHHHHh
Q 012095 448 LTTLQAAVERIKKGLLT 464 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~ 464 (471)
++++++++++|+++++.
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999864
No 317
>PRK07480 putative aminotransferase; Validated
Probab=99.74 E-value=3.9e-15 Score=152.59 Aligned_cols=354 Identities=15% Similarity=0.099 Sum_probs=208.2
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+............+.+..+++.+.+..+. ..+.++++++++++.
T Consensus 47 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseA~ 124 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPP--GFNHVFFTNSGSEAN 124 (456)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHH
Confidence 3688899998875 33444 788999999998763221111123356667777777655432 246899999999999
Q ss_pred HHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CCE------------EEEecCCC--CCCCcCC--------
Q 012095 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DAT------------PVILPTRI--SENFLLD-------- 217 (471)
Q Consensus 169 ~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~~------------~~~v~~~~--~~~~~ld-------- 217 (471)
..+++.... +| ..|+...-+|++....+... |.. +..++... ...+..+
T Consensus 125 e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 204 (456)
T PRK07480 125 DTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAA 204 (456)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHH
Confidence 988876521 33 46888888888754322221 111 11122110 0000011
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+|++...+.-.|. ..+.+.+++|.++|++| |+++|.||++..|--.|.. ..+....-..|
T Consensus 205 ~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~a~~~~gv~PD 282 (456)
T PRK07480 205 ARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY-DILLVADEVICGFGRTGEW-FGSQHFGIKPD 282 (456)
T ss_pred HHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcCcch-hhhhhcCCCCC
Confidence 255655442 24456666544554665 56788899999999999 9999999999876322221 11111111112
Q ss_pred ceEEEecCCcccCccch-hheeeEcCHHHHHHHHH----HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
+-+|+|.++ .|. .+|.+++++++.+.+.. .....+++.++++.+++.+.|+.-.. ++.+++.. +++
T Consensus 283 ----iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~-~~l~~~~~---~~~ 353 (456)
T PRK07480 283 ----LMTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRD-EGIVERVR---DDT 353 (456)
T ss_pred ----eeeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHh-CCHHHHHH---HHH
Confidence 446899998 784 89999999999887732 22345778899999999998875211 12222221 122
Q ss_pred HHHHHHHh---cCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC-CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEE
Q 012095 368 RDFLVKSF---GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 443 (471)
Q Consensus 368 r~~l~~~L---~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis 443 (471)
-+++.+.| .+.+-+.-+... |+++-+.+-+... ....+.... ....+.+.++++ ||.+.+. .+.+|++
T Consensus 354 g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~-----~~~l~~~ 425 (456)
T PRK07480 354 GPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKA-TRERFEAGGGVGTICRDHCFAN-GLIMRAV-----GDRMIIS 425 (456)
T ss_pred HHHHHHHHHHhhcCCCeeeEEee-cceEEEEEecccc-ccccCcchhhHHHHHHHHHHHC-CcEEeec-----CCEEEEE
Confidence 33333333 333222222333 3445555522100 000000000 124566667765 9998763 2578998
Q ss_pred eec--CHHHHHHHHHHHHHHHHhhC
Q 012095 444 YAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 444 ~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
... ++++|++++++|.+++.+++
T Consensus 426 Ppl~it~~eid~~~~~l~~al~~~~ 450 (456)
T PRK07480 426 PPLVITHAEIDELVEKARKALDATA 450 (456)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 887 99999999999999998763
No 318
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.74 E-value=5.3e-15 Score=151.80 Aligned_cols=357 Identities=15% Similarity=0.099 Sum_probs=206.2
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEe-CChHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVS-NGAKQ 166 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it-~G~~~ 166 (471)
..|+.+||+..|.. .++. ++.+.+++.+++.+..... ...-..+.+..+++.+.+........ +.++++ +++++
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH-TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccc-ccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 36888999988863 3443 7889999999886532111 11112355556666665433211111 356564 78899
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCC--CCc--------CCHHHH
Q 012095 167 SILQAVLAVC-SPG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISE--NFL--------LDPKVL 221 (471)
Q Consensus 167 al~~~~~~l~-~~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~--~~~--------ld~e~l 221 (471)
+...+++... -+| ..|+....+|++....+... |. .+..+|..... .+. .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 9998888653 234 67888888888766443321 10 12233332110 000 136677
Q ss_pred Hhhhcc------CCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCce
Q 012095 222 ESKLTE------KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (471)
Q Consensus 222 ~~~l~~------~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (471)
++.+.+ ++.+|++...+.-.|. ..+++.++++.++|++| |+++|.||+..+|--.|.. .....+.-..|
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~-~a~e~~gv~PD-- 294 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA-GIPLIVDEIQSGFGRTGKM-FAFEHAGIIPD-- 294 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcHH-HHHHhcCCCCC--
Confidence 777753 2445555333433465 56799999999999999 9999999999887322311 11111111111
Q ss_pred EEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+-+++|.+| .|+.+|.+++++++ +.+.......+++.++++.+++.+.|+.-. + +++.++.++.-+++.+.
T Consensus 295 --iv~~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~--~---~~l~~~~~~~G~~l~~~ 365 (464)
T PRK06938 295 --VVVLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIK--E---HRLAEHAAAMGERLREH 365 (464)
T ss_pred --EEEeecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHH--H---hHHHHHHHHHHHHHHHH
Confidence 444789998 89999999998774 544322334577789999999998887411 1 12223333333333333
Q ss_pred hcC----CCCCeeeCCCcceEEeEecCCccCCc-ccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-
Q 012095 375 FGE----LEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 446 (471)
Q Consensus 375 L~~----~~g~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~- 446 (471)
|++ .+.+.-+... |.++.+.+....... ..+... ......+...++++ ||++.++..+ .+.+|+....
T Consensus 366 L~~l~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g~~--~~~l~~~Ppl~ 441 (464)
T PRK06938 366 LRQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRR-GLILELGGRH--GSVVRFLPPLI 441 (464)
T ss_pred HHHHHHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHC-CeEEeecCCC--CCEEEEECCCc
Confidence 333 3322222333 444555553210000 000000 00134567777765 9999875322 3678887554
Q ss_pred -CHHHHHHHHHHHHHHHHhhC
Q 012095 447 -SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l~~~~ 466 (471)
++++++++++++.+++.++.
T Consensus 442 it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 442 ITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred cCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998753
No 319
>PRK07036 hypothetical protein; Provisional
Probab=99.74 E-value=5e-15 Score=152.15 Aligned_cols=351 Identities=14% Similarity=0.125 Sum_probs=209.3
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCC-CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNA-GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~-G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+..+.. +.. ...+.+..+++.+.+.... ..+.++++++++++
T Consensus 48 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGseA 124 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYT-PFGDMTNAPAAELAAKLAELAPG--DLNHVFLTTGGSTA 124 (466)
T ss_pred CCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccc-cccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHH
Confidence 3688899998886 33443 7889999999887632111 111 2345667777777655431 23689999999999
Q ss_pred HHHHHHHhc------C-CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCC--CCCcCC-------
Q 012095 168 ILQAVLAVC------S-PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRIS--ENFLLD------- 217 (471)
Q Consensus 168 l~~~~~~l~------~-~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~--~~~~ld------- 217 (471)
+..+++... . +| ..|+....+|++....+..... .+..++.... ..++.+
T Consensus 125 ve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 204 (466)
T PRK07036 125 VDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHH
Confidence 998888642 1 22 5788888888876543322211 1222322110 001111
Q ss_pred -HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc-c-cccCCC
Q 012095 218 -PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-S-FASLPG 289 (471)
Q Consensus 218 -~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~-~-~~~~~~ 289 (471)
++.+++.+. ++..+|++...+.-.|. ..+++.+++|.++|++| ++++|.||++..|--.|.... . ...+.+
T Consensus 205 ~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~~~~~~~gv~P 283 (466)
T PRK07036 205 LVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY-DILYISDEVVTGFGRLGHFFASEAVFGIQP 283 (466)
T ss_pred HHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCcCchhhhhhhhcCCCC
Confidence 234455442 23445555444555565 56888999999999999 999999999987632221100 0 112221
Q ss_pred CCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
| +-+|+|.++ .| +.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.- ++ +++.
T Consensus 284 --D----ivt~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i---~~--~~l~ 351 (466)
T PRK07036 284 --D----IITFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIM---ER--EGLC 351 (466)
T ss_pred --C----EEEEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHH
Confidence 2 446799998 78 489999999999988753 122346678999999998888741 11 1233
Q ss_pred HHHHHHHHHHHHHhc---CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012095 362 KAFRERRDFLVKSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 438 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~---~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~ 438 (471)
+..++.-+++.+.|+ +.+-+.-.... |.++.+.+...................+.+.++++ ||++.+.. +
T Consensus 352 ~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~-----~ 424 (466)
T PRK07036 352 EHVREVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSKALLPEDIAIGQRIDRHCQER-GLLVRPLE-----H 424 (466)
T ss_pred HHHHHHHHHHHHHHHHhccCCCEEEEEee-ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC-CcEEeecC-----C
Confidence 333334444444443 33322222333 44455666321100000000000134677777765 99987632 4
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 439 CIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 439 ~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
.+|++... ++++|++++++|.++++++
T Consensus 425 ~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 425 LCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 67888554 9999999999999998765
No 320
>PRK07483 hypothetical protein; Provisional
Probab=99.73 E-value=5e-15 Score=151.31 Aligned_cols=362 Identities=11% Similarity=0.075 Sum_probs=211.1
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+... +.+.....+....+++.+.+.... ..+.++++++++++.
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~-~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsEAv 103 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAY-AHTSFFTTEPAEALADRLVAAAPA--GLEHVYFVSGGSEAV 103 (443)
T ss_pred CCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCC--CCCEEEEcCCcHHHH
Confidence 3688899998885 34444 78899999999876321 111112245556677777654331 236899999999999
Q ss_pred HHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHc-CC------------EEEEecCCCCCCCcC-----------
Q 012095 169 LQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIA-DA------------TPVILPTRISENFLL----------- 216 (471)
Q Consensus 169 ~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~-G~------------~~~~v~~~~~~~~~l----------- 216 (471)
..+++.... +| ..|+...-+|++....+... |- .+..++... .|.-
T Consensus 104 e~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 104 EAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHH
Confidence 988886431 34 46888888888765333222 11 011222110 0110
Q ss_pred --CHHHHHhhhc----cCCcEEEEcCCCC-Ccc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 217 --DPKVLESKLT----EKSRLLILCSPSN-PTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 217 --d~e~l~~~l~----~~~~~i~i~~p~N-PtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
.++.+++.+. ++..+|++...+- -.| ...+++.+++|.++|++| |+++|.||++..+--.|.. .....+.
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~-gillI~DEV~tGfGRtG~~-~a~~~~g 259 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY-GVLLILDEVMCGMGRTGTL-FACEEDG 259 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh-CCEEEEecceeCcccCcHH-HHHhhcC
Confidence 0255666553 2345555543342 235 567888999999999999 9999999999876322211 1111111
Q ss_pred CCCCceEEEecCCcccCccch-hheeeEcCHHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
-..| +-+++|.++ .|+ .+|.+++++++.+.+..- ....+++.++++.+++.+.|+.-.. ++.+++..+.
T Consensus 260 v~PD----iv~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~-~~l~~~~~~~ 333 (443)
T PRK07483 260 VAPD----LVTIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE-DGLLANVRAR 333 (443)
T ss_pred CCCC----eeeehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHH
Confidence 1112 445789998 886 999999999998887531 2335677899999999888874111 1222222222
Q ss_pred HHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC-C-CC-CCcE
Q 012095 364 FRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA-F-GD-DTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~-f-~~-~~~i 440 (471)
=+..++.|.+.+.+.+.+.-+... |.++-+.+.+.................+.+.++++ ||++.+... . +. .+.+
T Consensus 334 g~~l~~~L~~l~~~~~~i~~vRG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~~~~~~~~~~~~l 411 (443)
T PRK07483 334 GEQLRARLRERLGQHPHVGDIRGR-GLFVGVELVADRATKAPFDPALKLHARIKREAMAR-GLMVYPMGGTIDGVRGDHV 411 (443)
T ss_pred HHHHHHHHHHHHhcCCCeeeEeec-ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHC-CcEEEecCccccCCCCCEE
Confidence 222233333333334322222333 33344454221000000000000134677777776 999877421 1 11 3679
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 441 RISYAA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 441 Ris~~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
|+.... +++++++++++|++++.++...
T Consensus 412 ~~~PpL~it~~eid~~~~~l~~~l~~~~~~ 441 (443)
T PRK07483 412 LLAPPFIITAAQIDEIVERLGDAIDAALAA 441 (443)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 997764 9999999999999999876543
No 321
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=8.2e-15 Score=150.48 Aligned_cols=349 Identities=11% Similarity=0.054 Sum_probs=211.2
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+..... ...-..+.+..+++.+.+... -..+.++++++++++..
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsEAve 121 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVI-LAGFSHEPVIELSERLVKITP--PGLSRCFYADNGSSAIE 121 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHHHHH
Confidence 678899998886 33443 6889999999987632211 111234566667777765432 12368999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCC--CCcC--------CH
Q 012095 170 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISE--NFLL--------DP 218 (471)
Q Consensus 170 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~--~~~l--------d~ 218 (471)
.+++... .+| ..|+....+|++....+...+.. +..+|..... .++. ++
T Consensus 122 ~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l 201 (466)
T PRK07030 122 VALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMF 201 (466)
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHH
Confidence 8888752 133 56888888888865443322211 2223221100 0011 24
Q ss_pred HHHHhhhc---cCCcEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCC
Q 012095 219 KVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 292 (471)
Q Consensus 219 e~l~~~l~---~~~~~i~i~~-p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~ 292 (471)
+.+++.+. ++..+|++.- .+.-.|. ..+++.+++|.++|++| ++++|.||++..+-..|... .....+.+ |
T Consensus 202 ~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~-g~llI~DEV~TGfGRtG~~~a~~~~gv~P--D 278 (466)
T PRK07030 202 AHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY-GVHLIHDEIAVGFGRTGTMFACEQAGIRP--D 278 (466)
T ss_pred HHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCcCccccchHHHhcCCCC--C
Confidence 56677664 2344555543 2444564 67888999999999999 99999999998763333211 11112221 2
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
+-+|+|.++ .| +.+|.+++++++.+.+.. .....+++.++++.+++.+.|+.-. + +++.++.
T Consensus 279 ----iv~~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~---~--~~l~~~~ 348 (466)
T PRK07030 279 ----FLCLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFE---Q--DNVIENN 348 (466)
T ss_pred ----EEeeehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHH---h--cCHHHHH
Confidence 444689998 89 499999999999987742 1234566789999999998887421 1 1233333
Q ss_pred HHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 365 ~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
++.-+++.+.|++ .+.+.-+... |.++-+.+..... ....+.. ......+.+.++++ ||++.+.. +.+
T Consensus 349 ~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~-~~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-----~~i 420 (466)
T PRK07030 349 RALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKA-SKTPYPWQERRGLKVYQHALER-GALLRPLG-----SVV 420 (466)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCcc-ccccCcchhHHHHHHHHHHHHC-CeEEEecC-----CEE
Confidence 3444444444433 3333223333 4445555532100 0000000 00124677777775 99987731 468
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 441 RISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 441 Ris~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
|+... .++++|++++++|.++++++
T Consensus 421 ~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 421 YFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 88655 49999999999999999886
No 322
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.73 E-value=9.5e-15 Score=150.01 Aligned_cols=351 Identities=12% Similarity=0.093 Sum_probs=210.7
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. +|.+.+++.+++.+..+.. ...-..+....+++.+.+..+. ..+.++++++++++.
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~-~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~SGseAv 129 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHST-LLGLANVPSILLAEKLIEVVPE--GLKKVFYSDSGATAV 129 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcc-ccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCCcHHHH
Confidence 3688899998875 33444 7889999999987622111 1111234556677776655431 236899999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCC--CCc--------CC
Q 012095 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISE--NFL--------LD 217 (471)
Q Consensus 169 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~--~~~--------ld 217 (471)
..+++... .+| ..|+..+.+|++....+...+. .+..+|..... .+. -+
T Consensus 130 e~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK06916 130 EIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKH 209 (460)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHH
Confidence 99888653 244 6788888888886543332211 12223221100 011 13
Q ss_pred HHHHHhhhc---cCCcEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~---~~~~~i~i~~-p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++.+++.+. ++..+|++.- .+.-.|. +.+++.+++|.++|++| ++++|.||++..+--.|.. ..+....-..|
T Consensus 210 ~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~-g~llI~DEV~TG~GRtG~~-~a~~~~gv~PD 287 (460)
T PRK06916 210 LEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY-NVLFITDEVATGFGRTGKM-FACEHENVTPD 287 (460)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc-CCEEEeechhhCCCcCchh-hHHHhcCCCCC
Confidence 556667664 3445555544 3555665 56999999999999999 9999999999876322221 11111111112
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
+-+++|.++ .| +.+|.+++++++.+.+.. .....+++.++++..++.+.|+.- ++ +.+.+..
T Consensus 288 ----iv~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l---~~--~~l~~~~ 357 (460)
T PRK06916 288 ----IMTAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELY---EK--TNLIEQV 357 (460)
T ss_pred ----eeeeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHH---Hh--ccHHHHH
Confidence 335799998 88 599999999999887642 123346667999988888888641 11 1233444
Q ss_pred HHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCCCC-CHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 365 ~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
+++-+++.+.|++ .+.+.-+...|-| +-+.+.+.... .+.+.... ....+...++++ ||++.|.. +.+
T Consensus 358 ~~~g~~l~~~l~~l~~~~~v~~vrG~Glm-~giel~~~~~~-~~~~~~~~~~~~~i~~~~~~~-Gvl~~~~g-----~~l 429 (460)
T PRK06916 358 ARKTEYVATQLEDLFALKHVGDIRQLGLM-VGIELVKNKET-KEPFEWTERVGVQVCKRSREL-GMLTRPLG-----NTI 429 (460)
T ss_pred HHHHHHHHHHHHHhhcCCCeEEeecCCce-eeEEeeccccc-ccCCCchhhHHHHHHHHHHHC-CeEEEecC-----CEE
Confidence 4444455555544 3323223334433 44444321000 00000000 124677777765 99998742 467
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 441 RISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 441 Ris~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
|+... .++++|++++++|+++++++
T Consensus 430 ~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 430 VFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 88754 49999999999999999764
No 323
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.73 E-value=6.4e-15 Score=150.06 Aligned_cols=337 Identities=14% Similarity=0.097 Sum_probs=206.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..|. ..++. ++.+.+++.+++.+..... ...-..+....+++.+.+..+. .-+.++++++++++..
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~v~f~~sGseA~e 119 (427)
T TIGR00508 43 DGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVM-FGGFTHKPAIELCQKLVKMTPN--ALDCVFLADSGSVAVE 119 (427)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc-ccccCCHHHHHHHHHHHhhCCC--CCCEEEEeCCcHHHHH
Confidence 578899998876 33333 6889999999887532111 1000123334455555544332 2369999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHH-cCCE-------------EEEecCCCCCCCc-----CCHHHHH
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARI-ADAT-------------PVILPTRISENFL-----LDPKVLE 222 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~-~G~~-------------~~~v~~~~~~~~~-----ld~e~l~ 222 (471)
.+++.... +| ..|+....+|++....+.. .|.. ...++.. ...+. -|+++++
T Consensus 120 ~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~ 198 (427)
T TIGR00508 120 VALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLA 198 (427)
T ss_pred HHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCC-CccccchhHHHHHHHHH
Confidence 88886431 33 5788888888876533322 1211 1112211 01111 1456777
Q ss_pred hhhcc---CCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEE
Q 012095 223 SKLTE---KSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLT 296 (471)
Q Consensus 223 ~~l~~---~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~ 296 (471)
+.+.. +..+|++... ++-.|. ..+.+.+++|.++|++| ++++|+||++.++...|... .....+. .| |+
T Consensus 199 ~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~-~~llI~DEv~tG~Gr~G~~~~~~~~~v~--pD--i~ 273 (427)
T TIGR00508 199 KLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY-DILLIADEIATGFGRTGKLFACEHAGVV--PD--IL 273 (427)
T ss_pred HHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCccchhhhcCCC--CC--EE
Confidence 77642 3444544432 554554 56889999999999999 99999999997653333221 1112222 12 33
Q ss_pred EecCCcccCccch-hheeeEcCHHHHHHHHHHH-----hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Q 012095 297 VNGFSKAFAMTGW-RLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (471)
Q Consensus 297 ~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~~~-----~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~ 370 (471)
+++|.++ .|+ .++.+++++++++.+.... ...++..++++..++.++|+.-. .++ ..++.+++-++
T Consensus 274 --~~gK~l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~-~~~----~~~~~~~~~~~ 345 (427)
T TIGR00508 274 --CVGKALT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILL-EGE----WQKQVSAIENQ 345 (427)
T ss_pred --Eechhhh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHH-hCC----HHHHHHHHHHH
Confidence 3899996 785 6888889999988876421 22344568889888888887411 112 33455555555
Q ss_pred HHHHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--
Q 012095 371 LVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-- 445 (471)
Q Consensus 371 l~~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~-- 445 (471)
+.+.|+++ +++.-.... |.++.+.+.+. .....+.++|+++ ||.+.+.. +.+|++..
T Consensus 346 l~~~L~~l~~~~~i~~vrg~-G~~~~i~~~~~-----------~~~~~~~~~l~~~-Gv~~~~~~-----~~l~~~ppl~ 407 (427)
T TIGR00508 346 LKRELSPLRKNPVVKDVRVL-GAIGVVEMYKP-----------VNVEELQKKFVEQ-GVWIRPFG-----KLIYVMPPYI 407 (427)
T ss_pred HHHHHHHhhcCCCEEeEecc-ccEEEEEECCc-----------cCHHHHHHHHHHC-CeEEEecC-----CEEEEECCCC
Confidence 66666554 222211122 33355555422 1456788888876 99997642 36899877
Q ss_pred cCHHHHHHHHHHHHHHHHh
Q 012095 446 ASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 446 ~~~e~i~~~~~~l~~~l~~ 464 (471)
.++++|++++++|++++++
T Consensus 408 ~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 408 ITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 5999999999999999864
No 324
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=1.4e-14 Score=148.66 Aligned_cols=356 Identities=13% Similarity=0.060 Sum_probs=210.7
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCCCcEEEeCChH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLS---YTPDQILVSNGAK 165 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---~~~~~i~it~G~~ 165 (471)
..|+.+||+..|. ..++. ++.+.+++.+++.+-.... ...-..+.+..+++.+.+..... -..+.++++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS 139 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS 139 (472)
T ss_pred CCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence 3688899998885 33443 6889999998876421111 11112355667777776544311 0235899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCC--CCcC------
Q 012095 166 QSILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISE--NFLL------ 216 (471)
Q Consensus 166 ~al~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~--~~~l------ 216 (471)
++...+++.... +| ..|+....+|++....+...+.. +..+|..... .++.
T Consensus 140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~ 219 (472)
T PRK08742 140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence 999988887521 33 67888898898876443332211 1222321100 0011
Q ss_pred --CHHHHHhhhc---cCCcEEEEcC-CCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 217 --DPKVLESKLT---EKSRLLILCS-PSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 217 --d~e~l~~~l~---~~~~~i~i~~-p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
+++.+++.+. ++..+|++.. .++-.|. ..+++.++++.++|++| |+++|.||++..|-..|... ......-
T Consensus 220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~-gillI~DEV~TGfGRtG~~~-a~e~~gv 297 (472)
T PRK08742 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH-GAFLIADEIATGFGRTGTLF-ACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccch-HHHhcCC
Confidence 2566666664 2344555543 2555675 67889999999999999 99999999998874333211 1111111
Q ss_pred CCCceEEEecCCcccCccch-hheeeEcCHHHHHHHHH------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
..| +-+++|.++ .|+ .+|.+++++++.+.+.. .....+++.++++.+++.+.|+.-.. ++.+++..+
T Consensus 298 ~PD----iv~~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~-~~l~~~~~~ 371 (472)
T PRK08742 298 MPD----LLCLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFAD-DDVIARNQP 371 (472)
T ss_pred CCC----EEEEccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHH-CCHHHHHHH
Confidence 111 444789998 884 99999999999887642 12335677899999998888874110 111222222
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCC-CCHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012095 363 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENSESLCRYLLDKAQVALVPGDAFGDDTCIR 441 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iR 441 (471)
. .++...+.+.+.+.+.+.-+... |+++-+.+....... ..+... .-...+.+.++++ ||++.+. + +.||
T Consensus 372 ~-g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~-~~~~~~~~~~~~~~~~~~~~-Gll~~~~---g--~vi~ 442 (472)
T PRK08742 372 T-AARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKR-TPFPPAARVGLHAYRAALAR-GVVLRPL---G--DVLY 442 (472)
T ss_pred H-HHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCcccc-ccCCchhHHHHHHHHHHHHC-CeEEEec---C--CEEE
Confidence 1 11111233334444333223333 444555553210000 000000 0124567777765 9999773 2 5799
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
|.... ++++|++++++|+++++++
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 98775 9999999999999999875
No 325
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.72 E-value=1.7e-14 Score=132.89 Aligned_cols=321 Identities=16% Similarity=0.164 Sum_probs=222.9
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCC-h
Q 012095 115 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVS-Y 192 (471)
Q Consensus 115 ~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~-~ 192 (471)
.++.++......+|.. +-..++.+.+.+-++..|.. .++.-.++...++.+++.++-.++.|||.|++.. ..|.. +
T Consensus 30 ~~V~~A~~~~~lgh~s-Pe~~qIm~~v~egikyVFkT-~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra 107 (385)
T KOG2862|consen 30 GRVQEAMSRPSLGHMS-PEFVQIMDEVLEGIKYVFKT-ANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRA 107 (385)
T ss_pred HHHHHhhcCCccccCC-HHHHHHHHHHHHHHHHHhcc-CCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHH
Confidence 3344444444556633 23445555555555444442 1334556666688899999999999999988755 44432 3
Q ss_pred HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 012095 193 PEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (471)
Q Consensus 193 ~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y 271 (471)
.++++.+|+++..|+.+. +....++.+.+++. .+++++++++...-||+..+. +..+-++|++| ++++++|.+-
T Consensus 108 ~D~~~r~ga~V~~v~~~~--G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~-~~lllVD~Va 182 (385)
T KOG2862|consen 108 ADCARRYGAEVDVVEADI--GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKH-EALLLVDTVA 182 (385)
T ss_pred HHHHHhhCceeeEEecCc--ccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcC-CeEEEEechh
Confidence 478899999999998764 44589999999985 578999999999999998882 34456788999 8999999887
Q ss_pred CccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh----------------------
Q 012095 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---------------------- 329 (471)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~---------------------- 329 (471)
+-. + .. +.++. ++-.+....--|++|.|- .++-+..++...++++..+.
T Consensus 183 Slg---g---t~-F~mDe-wgVDvaytgSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~ 253 (385)
T KOG2862|consen 183 SLG---G---TE-FEMDE-WGVDVAYTGSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEP 253 (385)
T ss_pred hcC---C---cc-ceehh-hcccEEEecchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcc
Confidence 641 1 12 23443 454555555569997542 35557788888877754332
Q ss_pred -cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC----CCcceEEeEecCCccCCcc
Q 012095 330 -QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE----PQGAFYLFIDFSTYYGSEA 404 (471)
Q Consensus 330 -~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~----p~~g~~~~~~~~~~~~~~~ 404 (471)
.+..+++....+...++|..- .++.+++..++.++..+++...|+++ |++... +.-.-...+.+|..
T Consensus 254 ~~yhhT~pv~lly~Lr~AL~~I--~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g----- 325 (385)
T KOG2862|consen 254 RAYHHTPPVQLLYSLRAALALI--AEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG----- 325 (385)
T ss_pred cccccCCcHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC-----
Confidence 122346666667777777642 36778999999999999999999998 765431 11122235667654
Q ss_pred cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhh
Q 012095 405 EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 405 ~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l~~~ 465 (471)
.|-.+++.++..+++|.+.-|-....+..+||.+-. +.+.++..++.|+.++.+.
T Consensus 326 ------vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 326 ------VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred ------CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 388899999999888877766655567899998654 6789999999999888654
No 326
>PLN03032 serine decarboxylase; Provisional
Probab=99.71 E-value=7.6e-15 Score=145.65 Aligned_cols=306 Identities=14% Similarity=0.088 Sum_probs=204.9
Q ss_pred HHHHHHHHHHcCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcE--EEeCChHHHHHHHHHHhc--CCCCeEEE
Q 012095 113 IAEAGINAIREGF----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAVC--SPGDEVII 184 (471)
Q Consensus 113 v~~a~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~it~G~~~al~~~~~~l~--~~gd~Vlv 184 (471)
+.+++.+.+.+.. ..+.......++.+.+.+++.+.+|. +++++ ++|+|+|+++..++.+.. .++..|++
T Consensus 39 ~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~--~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~ 116 (374)
T PLN03032 39 ELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL--EKDEYWGYITTCGTEGNLHGILVGREVFPDGILYA 116 (374)
T ss_pred HHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC--CCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEe
Confidence 4566655544321 11211234578888888999888884 55666 999999999988777643 24568999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012095 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~ 261 (471)
+.-.|.+....++..|.+++.||++. ++.+|+++|++++++ +|.+++++..+|+||.+-| +++|+++|+++
T Consensus 117 s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~- 190 (374)
T PLN03032 117 SRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD---LDRILRILKEL- 190 (374)
T ss_pred CCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHh-
Confidence 99999999999999999999999864 456999999999976 4667778889999999999 88999999998
Q ss_pred C-----eEEEEccCCCcccc--CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc---
Q 012095 262 R-----LLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF--- 331 (471)
Q Consensus 262 ~-----~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~--- 331 (471)
+ +|+.+|.+|+.+.. ... .+ ...+. ..-..+.-|.+|.++ ....+|.++..++.++.+.....+.
T Consensus 191 g~~~~~~~lHvDaA~gg~~~p~~~~-~~-~~~~~--~~vDSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~~~~~Yl~~~ 265 (374)
T PLN03032 191 GYTEDRFYIHCDGALFGLMMPFVSR-AP-EVTFR--KPIGSVSVSGHKFLG-CPMPCGVALTRKKHVKALSQNVEYLNSR 265 (374)
T ss_pred CCCCCCeeEEEEccchhhhhhccCC-Cc-ccCCC--cCCcEEEECcccccC-CCcCeEEEEEEchhhHhhccCCcccCCC
Confidence 6 59999999976432 111 00 11111 123356778899987 3456899998877766543211111
Q ss_pred --cCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCCCcceEEeEecCCccCCcccC
Q 012095 332 --TSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 332 --~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~~g~~~~~~~~~~~~~~~~~ 406 (471)
+... +......+...|.. ...+.+.++.++.-++.+++.+.|++. |+++ ..|.... +.++.|.
T Consensus 266 d~ti~gSR~g~~~l~~w~~l~~--~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~-V~f~~~~-------- 333 (374)
T PLN03032 266 DATIMGSRNGHAPLYLWYTLRR--KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSST-VVFERPM-------- 333 (374)
T ss_pred CCcccCCCchHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceE-EEEcCCC--------
Confidence 1111 22333334444442 135778888888889999999999887 6654 5566554 4434331
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
... +.++..+... .+++|+.+.. +.+.++++++.|++
T Consensus 334 ------~~~----~~~~w~l~~~-------~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 334 ------DEA----FIKKWQLACE-------GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred ------cHh----Hhheeeeccc-------CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 111 2233223321 2478888876 77888888887764
No 327
>PLN02880 tyrosine decarboxylase
Probab=99.71 E-value=8.7e-15 Score=150.94 Aligned_cols=343 Identities=13% Similarity=0.077 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CcEEEeCChHHHHHHHHHHhcC-----C--
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-----DQILVSNGAKQSILQAVLAVCS-----P-- 178 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~l~~-----~-- 178 (471)
..+.+.+..++......|...++..++.+.+.+++.+.+|.+-.. ..-++|+|++++...++.+..+ .
T Consensus 97 ~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~ 176 (490)
T PLN02880 97 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK 176 (490)
T ss_pred HHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc
Confidence 345555555554444455556678999999999999999965211 2367889988887666554321 1
Q ss_pred ---CC-eEEEcCCCCCChHHHHHHcCCE---EEEecCCCCCCCcCCHHHHHhhhccC------CcEEEEcCCCCCcccCC
Q 012095 179 ---GD-EVIIPAPFWVSYPEMARIADAT---PVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVY 245 (471)
Q Consensus 179 ---gd-~Vlv~~p~y~~~~~~~~~~G~~---~~~v~~~~~~~~~ld~e~l~~~l~~~------~~~i~i~~p~NPtG~~~ 245 (471)
.. .|++++-+|.+...+++.+|.. ++.||++.++++.+|++.|++++.+. +-+|+-+..+-.||.+-
T Consensus 177 ~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD 256 (490)
T PLN02880 177 NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD 256 (490)
T ss_pred cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC
Confidence 12 4567888999999999999984 78899886667889999999998642 34445566778899999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH--HHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVAA 323 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~--~~i~~ 323 (471)
| +++|+++|++| ++|+.+|.+|+.+......... .+.+...-.-+..+++|.+. ...-+|+++.++ .+++.
T Consensus 257 p---l~eI~~i~~~~-~iwlHVDaA~gg~~~~~~~~~~--~l~gie~aDSit~d~HKwl~-~P~~~g~llvr~~~~l~~~ 329 (490)
T PLN02880 257 P---LLELGKIAKSN-GMWFHVDAAYAGSACICPEYRH--YIDGVEEADSFNMNAHKWFL-TNFDCSLLWVKDRNALIQS 329 (490)
T ss_pred c---HHHHHHHHHHc-CCEEEEehhhHHHHHhCHHHHH--HhcCchhcCEEEECchhhcC-CCccEEEEEEeCHHHHHHH
Confidence 9 99999999999 9999999999976432111000 11211122356778999996 667888888753 22232
Q ss_pred HHHHHhccc--------------C---CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 324 CNKIQSQFT--------------S---GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 324 l~~~~~~~~--------------~---~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+..-..+.. . +...+....+...|.. ...+.+.+..++.-+.++++.+.+++.+++++..|
T Consensus 330 ~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~--~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~ 407 (490)
T PLN02880 330 LSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRL--YGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP 407 (490)
T ss_pred HccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 211110000 0 0111111111112322 13566677777677888999999998889887654
Q ss_pred -CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHH
Q 012095 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGL 462 (471)
Q Consensus 387 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l 462 (471)
..++ +.++++.... ..+.. ..-..++.++|.+++.+.+.+.. +....++|+++.. ++++++.+++.|.+..
T Consensus 408 ~~~~i-v~Fr~~~~~~-~~~~~--~~~n~~l~~~l~~~g~~~v~~t~-~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~ 482 (490)
T PLN02880 408 RIFSL-VCFRLVPPKN-NEDNG--NKLNHDLLDAVNSSGKIFISHTV-LSGKYVLRFAVGAPLTEERHVTAAWKVLQDEA 482 (490)
T ss_pred CceEE-EEEEEeCCCC-ChhhH--HHHHHHHHHHHHhCCCEEEEEEE-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 5554 5556653100 00000 00124566777766667666533 3345699999886 6799999999999887
Q ss_pred HhhCC
Q 012095 463 LTLRP 467 (471)
Q Consensus 463 ~~~~~ 467 (471)
+++..
T Consensus 483 ~~~~~ 487 (490)
T PLN02880 483 SKLLG 487 (490)
T ss_pred HHHHH
Confidence 77643
No 328
>PRK06148 hypothetical protein; Provisional
Probab=99.71 E-value=1.7e-14 Score=160.66 Aligned_cols=350 Identities=12% Similarity=0.079 Sum_probs=209.2
Q ss_pred cCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
.|+.+||+..|...++. ++.+.+++.+++.+..... ....+....+++.+.+.... ..+.+++++++++|...+
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p~--~~~~v~f~nSGsEA~e~A 696 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLPD--GLTVAFFVNSGSEANSLA 696 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCCC--CcCEEEEeCCcHHHHHHH
Confidence 57889999888766665 7899999999887632211 11234556666666654431 236899999999999988
Q ss_pred HHHhcC-CC-CeEEEcCCCCCChHHHHHH-cC------------CEEEEecCC--CCCCCcC-C-------HHHHHhhhc
Q 012095 172 VLAVCS-PG-DEVIIPAPFWVSYPEMARI-AD------------ATPVILPTR--ISENFLL-D-------PKVLESKLT 226 (471)
Q Consensus 172 ~~~l~~-~g-d~Vlv~~p~y~~~~~~~~~-~G------------~~~~~v~~~--~~~~~~l-d-------~e~l~~~l~ 226 (471)
++.... .| ..|+..+.+|++....+.. .| ..+..++.. ....|+. + .+.+++.+.
T Consensus 697 lklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~ 776 (1013)
T PRK06148 697 LRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIA 776 (1013)
T ss_pred HHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHH
Confidence 886532 33 5788888888876533221 11 011111111 0001211 1 134444442
Q ss_pred ------cCCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 227 ------EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 227 ------~~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
+++.+|++...+.-.| ...+++.++++.++|++| |+++|.||++.+|.-.|.....+.... -.--+-+
T Consensus 777 ~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~-g~llI~DEVqtGfGRtG~~~~a~e~~g----v~PDivt 851 (1013)
T PRK06148 777 AMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA-GGVCIADEVQVGFGRVGSHWWAFETQG----VVPDIVT 851 (1013)
T ss_pred hhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEecccCCCCCCCcchhhhhcC----CCcceee
Confidence 2344555543333344 577899999999999999 999999999987633232111111111 1112456
Q ss_pred CCcccCccchhheeeEcCHHHHHHHHHH-HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-
Q 012095 300 FSKAFAMTGWRLGYIAGPKHFVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE- 377 (471)
Q Consensus 300 ~SK~~g~~G~R~G~v~~~~~~i~~l~~~-~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~- 377 (471)
++|.+| .|+.+|.+++++++++.+..- ....+++.++++.+++.+.|+.-.. + .+.+..++.-+++.+.|++
T Consensus 852 ~gK~lg-gG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~-e----~l~~~~~~~G~~l~~~L~~l 925 (1013)
T PRK06148 852 MGKPIG-NGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED-E----DLQRNALEIGNYLLAGLREL 925 (1013)
T ss_pred eccccc-CCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhh-c----cHHHHHHHHHHHHHHHHHHH
Confidence 799998 899999999999999877532 1235777899999999888874211 1 2233333344444444433
Q ss_pred ---CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHH
Q 012095 378 ---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ 452 (471)
Q Consensus 378 ---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~ 452 (471)
.+-+.-+... |.++-+.+......... .......+.+.|+++ ||++.+.... .+.+||.... ++++++
T Consensus 926 ~~~~~~i~~VrG~-Gl~~gvel~~~~~~~~~---~~~~~~~i~~~~~~~-Gvl~~~~g~~--~~vlr~~Ppl~it~~~id 998 (1013)
T PRK06148 926 QDRFDIIGDVRGM-GLFLGIELVTDRKTKAP---ATAIARYVKNGARER-GILIGTEGPH--DNVLKIRPPLIFSRADAD 998 (1013)
T ss_pred HHhCCCceEEeee-ceEEEEEecCCccccCc---cHHHHHHHHHHHHhC-CeEEeccCCC--CCEEEEeCCccCCHHHHH
Confidence 3222222223 45555555321000000 000134577777765 9999874322 3678887664 999999
Q ss_pred HHHHHHHHHHHhh
Q 012095 453 AAVERIKKGLLTL 465 (471)
Q Consensus 453 ~~~~~l~~~l~~~ 465 (471)
+++++|.+++.++
T Consensus 999 ~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 999 HLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999764
No 329
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=2e-14 Score=147.46 Aligned_cols=362 Identities=14% Similarity=0.083 Sum_probs=204.9
Q ss_pred hcCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHH
Q 012095 92 QAGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQS 167 (471)
Q Consensus 92 ~~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~a 167 (471)
..|+.+||+..|.. .++. +|.+.+++.+++.++...++ ..-..+.+..+++.+.+..+..... ..++++++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA 133 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA 133 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence 36888999998863 3444 68899999998875332221 1123466667777776554311111 234666889999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCC--CCc----CCHHHH----H
Q 012095 168 ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISE--NFL----LDPKVL----E 222 (471)
Q Consensus 168 l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~--~~~----ld~e~l----~ 222 (471)
...+++... ...+.|+....+|++....+..... .+..+|..... .|+ -+.+.+ +
T Consensus 134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06931 134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE 213 (459)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 998888642 2236788889899887755443211 12223322100 010 022322 2
Q ss_pred hhhc------cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceE
Q 012095 223 SKLT------EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (471)
Q Consensus 223 ~~l~------~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 295 (471)
+.+. ++..+|++...+.-.|. ..+++.++++.++|++| |+++|.||+...|.-.|. ...+....-..|
T Consensus 214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~-g~LlI~DEV~tGfGRtG~-~~a~~~~gv~PD--- 288 (459)
T PRK06931 214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH-GILLIVDEVQAGFARTGK-MFAFEHAGIEPD--- 288 (459)
T ss_pred HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhcCCcCch-HHHhhhcCCCCC---
Confidence 3332 12445555333433454 56889999999999999 999999999988632232 111111111112
Q ss_pred EEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
+-+++|.++ .|+.+|.+++++++ +.+.......+++.++++.+++.+.|+.-.. ++.++...+.=+..++.|.+..
T Consensus 289 -ivt~gK~l~-gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~-~~l~~~~~~~G~~l~~~L~~l~ 364 (459)
T PRK06931 289 -IIVMSKAVG-GGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKE-ENLAQNAAERGEWLKAQLAELQ 364 (459)
T ss_pred -EEEeccccc-CCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHH
Confidence 445789998 88999988887664 5543333445777899999999888874111 1222222222222233333322
Q ss_pred cCCCCCeeeCCCcceEEeEecCCccCCc-ccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHH
Q 012095 376 GELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTT 450 (471)
Q Consensus 376 ~~~~g~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~ 450 (471)
.+.|.+.-+... |.++.+.+.+..... ..+... ..-...+...++++ ||++.++... .+.+|+.... ++++
T Consensus 365 ~~~~~i~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Gvl~~~~~~~--~~~l~~~Ppl~it~~e 440 (459)
T PRK06931 365 KRYPCIGNVRGR-GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN-GLLLERGGRN--GNVVRLLPPLLITQAE 440 (459)
T ss_pred HhCCCeEeEecC-ceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC-CcEEeecCCC--CCEEEEECCCCcCHHH
Confidence 334322223333 444555553210000 000000 00134566777765 9998775322 3568876664 9999
Q ss_pred HHHHHHHHHHHHHhhCC
Q 012095 451 LQAAVERIKKGLLTLRP 467 (471)
Q Consensus 451 i~~~~~~l~~~l~~~~~ 467 (471)
+++++++|.+++.++..
T Consensus 441 id~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 441 CEEFIDRFEQALLAAVK 457 (459)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987543
No 330
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.70 E-value=3.4e-15 Score=152.39 Aligned_cols=333 Identities=16% Similarity=0.181 Sum_probs=192.2
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|..+||+..|. ..++. ++.+.+|+.+++.+.. .|+. ....+-.+++.+.+... ..+.+.++++++++.
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~-~~~~---~~~~~~~la~~l~~~~p---~~~~v~f~~sGseA~ 117 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGC-NFTR---PSAIELDAAESFLELID---GADMVKFCKNGSDAT 117 (431)
T ss_pred CCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCc-CCCC---CCHHHHHHHHHHHHhCC---ccceEEEecCHHHHH
Confidence 3688899998876 33444 7899999999988643 2321 12333345555554332 236899999999999
Q ss_pred HHHHHHhc-CCC-CeEEEc-CCCCCChHHHHH-----HcCC------EEEEecCCCCCCCcCCHHHHHhhhcc---CCcE
Q 012095 169 LQAVLAVC-SPG-DEVIIP-APFWVSYPEMAR-----IADA------TPVILPTRISENFLLDPKVLESKLTE---KSRL 231 (471)
Q Consensus 169 ~~~~~~l~-~~g-d~Vlv~-~p~y~~~~~~~~-----~~G~------~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~ 231 (471)
..+++... -.| ..|+.. .-+|.++..... ..|. .+..++ + -|++++++++.. +..+
T Consensus 118 e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~-~d~~~l~~~l~~~~~~~aa 190 (431)
T PRK06209 118 SAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR------Y-NDIASLEALFEDHPGRIAC 190 (431)
T ss_pred HHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC------C-CCHHHHHHHHHhCCCCEEE
Confidence 99888642 134 345543 233332111100 0010 011111 1 278999988853 2334
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
|++ .|- .|...+.+.+++|.++|++| ++++|+||++..+...+........+.. -+.+|+|.+| .|+.+
T Consensus 191 vi~-Epv--~g~~~~~~~l~~l~~lc~~~-g~lLI~DEv~tG~~~~~~g~~~~~gv~P------Di~t~gK~lg-gG~p~ 259 (431)
T PRK06209 191 VIL-EPA--TADEPQDGFLHEVRRLCHEN-GALFILDEMITGFRWHMRGAQKLYGIVP------DLSCFGKALG-NGFAV 259 (431)
T ss_pred EEE-ccc--cCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccCCcCcchhhHHhCCCc------ceeeehhhhc-CCccc
Confidence 444 442 34477899999999999999 9999999999766432111111112221 1467899998 78999
Q ss_pred eeeEcCHHHHHH--HHHH------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 312 GYIAGPKHFVAA--CNKI------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 312 G~v~~~~~~i~~--l~~~------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
|++++++++++. +... ....++++++++.+++.+.|+.-.. +..++++.+.-+..++.+.+...++ ++..
T Consensus 260 ~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~-~~~~~~~~~~g~~l~~~L~~~~~~~-~~~~ 337 (431)
T PRK06209 260 SALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRD-EDVIERLHEQGAKLAAGVNEAAAEH-GLQD 337 (431)
T ss_pred EEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHHhC-CCCe
Confidence 999999999886 3111 1234556777888888888764211 2223333333333344343333334 3322
Q ss_pred -eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 384 -SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 384 -~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
....|.+..+.-+... .. +.........+.++|+++ ||++.| ++++..+++++|++++++|.+++
T Consensus 338 ~vr~~G~~~~~~~~~~~--~~--~~~~~~~~~~~~~~l~~~-Gi~~p~---------l~is~~ht~~dId~~l~~l~~~l 403 (431)
T PRK06209 338 HVRVSGRPCCLTYSTLD--GN--GQPSQAFRTLFLQETIRR-GVLMPS---------LVVSYAHGDADIERTIDAVHGAL 403 (431)
T ss_pred EEEeecceEEEEEecCC--cc--cCCcHHHHHHHHHHHHHC-Cccccc---------ccccccCCHHHHHHHHHHHHHHH
Confidence 1222333222222110 00 000000122567777775 887632 57787779999999999999998
Q ss_pred Hhh
Q 012095 463 LTL 465 (471)
Q Consensus 463 ~~~ 465 (471)
+++
T Consensus 404 ~~~ 406 (431)
T PRK06209 404 GVY 406 (431)
T ss_pred HHH
Confidence 875
No 331
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.69 E-value=6.8e-15 Score=146.84 Aligned_cols=313 Identities=12% Similarity=0.049 Sum_probs=192.0
Q ss_pred hHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEe-CChHHHHHHHHHHhcCCCCeEEEcC
Q 012095 110 PVLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS-NGAKQSILQAVLAVCSPGDEVIIPA 186 (471)
Q Consensus 110 p~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it-~G~~~al~~~~~~l~~~gd~Vlv~~ 186 (471)
|+.+.+++...... ...++++. ..++-+.+.+.+.+.++.+ +.++|+++ .|+|.+++.++..++.+ +.+++..
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~--f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~ 90 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAP--VKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEK-KSLHLSF 90 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChH--HHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhcccc-cccEEec
Confidence 67777776532100 01233221 2344444444444445532 33578886 45999999999998743 3444445
Q ss_pred CCCCCh-HHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 187 PFWVSY-PEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 187 p~y~~~-~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
-.|..- .+.+... +.++..++.+. +..++ ..+++++++|.+++-.|.||...| +++| ++++ ++
T Consensus 91 G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~p---i~~I---~~~~-g~ 156 (361)
T TIGR01366 91 GEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVP---VRRP---EGSD-DA 156 (361)
T ss_pred CHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceecc---cccc---cccC-CC
Confidence 555432 2344432 33666666542 21222 235678999999999999999999 5555 4788 99
Q ss_pred EEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh--------------
Q 012095 264 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS-------------- 329 (471)
Q Consensus 264 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~-------------- 329 (471)
++++|.+.+. +.....+.. ..+++.|-.|.+|.+|- ++.+++++++++++.....
T Consensus 157 ~~iVDavqs~----g~~~idv~~------~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~ 225 (361)
T TIGR01366 157 LVVIDATSGA----GGLPVDIAE------TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAASGRWVPEFLSLPTA 225 (361)
T ss_pred eEEEEcCccc----cCCCCCHHH------CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCCCCCCchhhhHHHH
Confidence 9999999875 222222221 23788999999987752 5556678887766542110
Q ss_pred -------cccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC----cceEEeEecC
Q 012095 330 -------QFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFIDFS 397 (471)
Q Consensus 330 -------~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----~g~~~~~~~~ 397 (471)
.+...++.....++.++++.- .+. .++...+++++..+++++.+.++++++..... ......+.++
T Consensus 226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l--~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~ 303 (361)
T TIGR01366 226 VDNSLKNQTYNTPAIATLALLAEQIDWM--NGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV 303 (361)
T ss_pred HhccccCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC
Confidence 111223333333555555531 012 26677788899999999999998555543211 1111223333
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+. .+..++.+.|.++ ||.+.+|......+.+|+|+.. +.++++++++.|+++++++
T Consensus 304 ~g-----------~~~~~v~~~L~~~-gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 304 DD-----------IDAATVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred Cc-----------cCHHHHHHHHHHC-CCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 32 2677888888655 9999876433235689999987 8999999999999988764
No 332
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.69 E-value=6.3e-14 Score=142.46 Aligned_cols=312 Identities=19% Similarity=0.188 Sum_probs=187.8
Q ss_pred ChHHHHHHHHHHHHcCC-CCCCCC---CC--CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeE
Q 012095 109 TPVLIAEAGINAIREGF-TRYTPN---AG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEV 182 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~-~~Y~~~---~G--~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~V 182 (471)
.|+.+.+++.+.+.... ..|.-. .| ...+++.+++++ | .+..+++++++.++..++.+ +.+||+|
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~----g----ae~alvv~sg~aAi~l~l~~-l~~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT----G----AEDALVVNNNAAAVLLALNT-LAKGKEV 163 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHH-hCCcCEE
Confidence 47889999988776421 122111 11 245556666654 4 23455677777888877754 6899999
Q ss_pred EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc--c--cCCCHHHHHH
Q 012095 183 IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT--G--SVYPKNLLDE 252 (471)
Q Consensus 183 lv~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt--G--~~~~~~~l~~ 252 (471)
++.+..|.. +...++..|++++.++.+. ..++++++++++++|++|++.+++|++ | ...+ +++
T Consensus 164 Ivs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l~~ 236 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---IAE 236 (454)
T ss_pred EECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---HHH
Confidence 999876432 2346678899999998642 148999999999999999999999985 6 4677 999
Q ss_pred HHHHHHhCCCeEEEEccCCCccc----cCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 253 IARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~----~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
|+++|++| ++++++|...+.+. |+-...+.+... ...+-.+++.|.+|.+|-+ ..|++++++++++++.+..
T Consensus 237 I~~la~~~-g~~vivD~~sG~l~~~~~~gl~~~p~~~~~-~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~ 312 (454)
T TIGR00474 237 LVALGREH-GLPVMEDLGSGSLVDLSRYGLPDEPTVQEV-IAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNP 312 (454)
T ss_pred HHHHHHHc-CCeEEEECCCcccccchhccCCCCcccccH-hHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhch
Confidence 99999999 99999998644321 100011111121 1134459999999998523 4799999999887765321
Q ss_pred hcccCCCChHHHHHHHHHHhccCC-Ch--------HHHHHHHHHHHHHHHHHHHHhcCC--CCC--eeeCCC----c---
Q 012095 329 SQFTSGASSISQKAGVAALGLGYA-GG--------EVVSKMVKAFRERRDFLVKSFGEL--EGV--KMSEPQ----G--- 388 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~~-~~--------~~~~~~~~~~~~~r~~l~~~L~~~--~g~--~~~~p~----~--- 388 (471)
..-..-..-....+..+.+..-.. .. ..+....++..++...+.+.|++. +|+ ++.+.. |
T Consensus 313 l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~ 392 (454)
T TIGR00474 313 LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSL 392 (454)
T ss_pred hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCC
Confidence 100011222222222223221000 01 112233445666777788888764 444 333221 1
Q ss_pred ------ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCC--EEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHH
Q 012095 389 ------AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ--VALVPGDAFGDDTCIRISYAA-SLTTLQAAVERI 458 (471)
Q Consensus 389 ------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~g--V~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l 458 (471)
++-+.++... .+..++.++|. +.. |+.+. .++.+.+.+.+ .+++++..+++|
T Consensus 393 p~~~l~~~~v~~~~~~------------~~~~~l~~~lr-~~~~~ii~r~-----~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 393 PDERLPSYAVTLTPDG------------LSAEKLEARLR-ELPPPIIGRI-----EDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred cCCCCCeEEEEEecCC------------CCHHHHHHHHh-cCCCCEEEEE-----ECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1222332221 15778888765 434 44332 25677788877 778888877765
No 333
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.69 E-value=3.6e-14 Score=145.01 Aligned_cols=343 Identities=11% Similarity=0.092 Sum_probs=196.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHH--HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAE--AGINAIREGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~--a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
.|+.+||+..|. ..++. +|.+.+ ++.+++.+-....+ ...-..+....+++.+.+..+. -..+.+++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p-~~~~~v~f~~SGsE 121 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD-PELPHLFFVDGGAL 121 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC-CCCCEEEEeCchHH
Confidence 578899998886 33444 678888 88888764211110 1111234445566665544321 13469999999999
Q ss_pred HHHHHHHHhc----------C---CC-CeEEEcCCCCCChHHHHHHc-CCEEE-----------EecCCCC----CCCc-
Q 012095 167 SILQAVLAVC----------S---PG-DEVIIPAPFWVSYPEMARIA-DATPV-----------ILPTRIS----ENFL- 215 (471)
Q Consensus 167 al~~~~~~l~----------~---~g-d~Vlv~~p~y~~~~~~~~~~-G~~~~-----------~v~~~~~----~~~~- 215 (471)
+++.+++... . ++ ..|+....+|++....+... |.... .++.... .+..
T Consensus 122 Ave~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK08297 122 AVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDL 201 (443)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccccc
Confidence 9999988762 1 12 56998999998876544432 21110 0110000 0000
Q ss_pred --------CCHHHHHhhhc---cCCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc
Q 012095 216 --------LDPKVLESKLT---EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (471)
Q Consensus 216 --------ld~e~l~~~l~---~~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (471)
-+++.+++.+. +++.+|++...+.-.| ...+++.+++|.++|++| |+++|.||++.+|...|.. ..
T Consensus 202 ~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~-g~llI~DEV~tGfGRtG~~-~a 279 (443)
T PRK08297 202 EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH-DALLIFDEVQTGVGLTGTA-WA 279 (443)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhccCccchH-HH
Confidence 02345556664 3455665543344445 458889999999999999 9999999999876333321 11
Q ss_pred cccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH-----HHhcccCCCChHHHHHHHHHHhccCCChHHHH
Q 012095 284 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~-----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
...+.-..| |+ +|+|.++ .| |.+.+ +++.+.+.. .....+++.++++..++.+.|+.-. .++.++
T Consensus 280 ~~~~gv~PD--iv--~~gK~l~-~~---a~l~~-~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~-~~~l~~ 349 (443)
T PRK08297 280 YQQLGVRPD--IV--AFGKKTQ-VC---GIMAG-RRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE-EDGLVE 349 (443)
T ss_pred HHhcCCCCC--EE--Eeccccc-cc---ceecc-hHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH-hcCHHH
Confidence 111111112 33 5899985 22 44433 333222111 1234566789999998888887411 122233
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 437 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~ 437 (471)
+..+.-+..++.+.+...+.+.+. ..... |.++.+.+++. .....+++.|+++ ||++.|+. .
T Consensus 350 ~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~-----------~~~~~~~~~l~~~-Gvl~~~~~----~ 412 (443)
T PRK08297 350 NAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTT-----------ADRDEVIRRLWEE-GVLVLPCG----E 412 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCH-----------HHHHHHHHHHHHC-CEEEecCC----C
Confidence 333332333333333333344332 33444 44466677532 1345788888865 99998853 2
Q ss_pred CcEEEE--eecCHHHHHHHHHHHHHHHHhh
Q 012095 438 TCIRIS--YAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 438 ~~iRis--~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+.+|++ +..+++++++++++|.++++++
T Consensus 413 ~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 413 RSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 468885 4459999999999999998764
No 334
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.69 E-value=2.2e-15 Score=145.09 Aligned_cols=298 Identities=18% Similarity=0.209 Sum_probs=210.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
..|..++.+.+.+.+++..| .++.+++..|-. .....+.+++.||.-|+-++-.+.+....+++.|+.++.+..+
T Consensus 177 e~G~~~~hkelE~l~A~f~g---~e~a~vF~mGf~-TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN- 251 (519)
T KOG1357|consen 177 EAGTTEEHKELEELVARFLG---VEDAIVFSMGFA-TNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN- 251 (519)
T ss_pred hcccHHHHHHHHHHHHHhcC---CcceEEEecccc-ccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-
Confidence 35888889999988888888 568899988832 2444677889999999999999999999999999999988764
Q ss_pred CCCCcCCHHHHHhhhcc-------CC-----cEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC
Q 012095 211 SENFLLDPKVLESKLTE-------KS-----RLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 277 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~-------~~-----~~i~i-~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~ 277 (471)
|.+.||+.|++ ++ |.+++ ..-...-|.+.. +.+++++++++ ..+++.||+|+....+
T Consensus 252 ------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkky-kayl~lDEAHSiGA~g 321 (519)
T KOG1357|consen 252 ------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKY-KAYLYLDEAHSIGAMG 321 (519)
T ss_pred ------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccc-cEEEEeeccccccccC
Confidence 56666666532 22 23333 444567788887 89999999999 9999999999976553
Q ss_pred C--CCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh---cccCCCChHHHHHHHHHHh-ccC
Q 012095 278 P--ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS---QFTSGASSISQKAGVAALG-LGY 351 (471)
Q Consensus 278 ~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~---~~~~~~~~~~q~aa~~~L~-~~~ 351 (471)
. ..-..++..+. .+..|.+++|.|++|..| ||+.+++++++.++.... ..+..++++.|.......- .+.
T Consensus 322 ~tGrgvce~~g~d~-~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~ 397 (519)
T KOG1357|consen 322 ATGRGVCEYFGVDP-EDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGE 397 (519)
T ss_pred CCCcceeeccCCCc-hhheeecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCC
Confidence 2 22223333332 466788999999999888 999999999998875322 2233455666655443322 222
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEe--EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE
Q 012095 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF--IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 429 (471)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~ 429 (471)
...+.-++..+++++++.+++..|.+. |+.+........+. +-.|. ....+.+.|+++ ++.++
T Consensus 398 dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-------------k~~~f~r~~l~~-nigvV 462 (519)
T KOG1357|consen 398 DGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-------------KIVAFSREMLER-NIGVV 462 (519)
T ss_pred CcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-------------cccHHHHHHHhc-CceEE
Confidence 234557778888999999999999887 88777665553322 22222 344677788877 55544
Q ss_pred CCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 430 PGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 430 pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
-+..... +..+|++.++ +.|+++.+++.+.++-
T Consensus 463 vvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 463 VVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred EEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 4332221 3677887776 8899999999887764
No 335
>PLN02590 probable tyrosine decarboxylase
Probab=99.69 E-value=4.3e-14 Score=145.96 Aligned_cols=341 Identities=13% Similarity=0.079 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCcEEEeCChHHHHHHHHHHhcC--------
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 177 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~l~~-------- 177 (471)
..+-+.+..++......|...++..++.+.+.+|+.+.+|.+-. ...-++++|++++...++.+.-+
T Consensus 145 ~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 145 GFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 44556666666544456666778899999999999999996521 13357788988887766554321
Q ss_pred ---CCCeEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhccC------CcEEEEcCCCCCcccCC
Q 012095 178 ---PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVY 245 (471)
Q Consensus 178 ---~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~~------~~~i~i~~p~NPtG~~~ 245 (471)
|.=.|++.+.+|.+...+++.+|. +++.||++.++++.+|++.|+++|.+. |-+|+-+..+-.||.+=
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD 304 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD 304 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC
Confidence 111455688899999999999998 588999976567899999999999642 33455566677899998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccchhheeeEcCH--HHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVA 322 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~--~~i~ 322 (471)
+ +++|+++|++| ++|+.+|.+|+.+..-.... ..+..+. .-.=+...++|.+. ...-.|.+...+ .+.+
T Consensus 305 p---l~~Ia~i~~~~-g~WlHVDaA~GG~al~~~~~r~~~~Gie---~ADSit~D~HK~l~-~p~~cg~llvr~~~~l~~ 376 (539)
T PLN02590 305 P---LVPLGNIAKKY-GIWLHVDAAYAGNACICPEYRKFIDGIE---NADSFNMNAHKWLF-ANQTCSPLWVKDRYSLID 376 (539)
T ss_pred C---HHHHHHHHHHh-CCeEEEecchhhhhhcChhhHHHhcCCc---cCCEEEECchhhcC-cCcCEEEEEecCHHHHHH
Confidence 8 99999999999 99999999999765321111 1111121 11234556899986 567788777654 3334
Q ss_pred HHHHHHhcc-----------------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 323 ACNKIQSQF-----------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 323 ~l~~~~~~~-----------------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
.+..-..+. ..+.-.+...-+...|.. +..+.+.++.++.-+..+++.+.+++.+++++..
T Consensus 377 a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~--~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~ 454 (539)
T PLN02590 377 ALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRL--YGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT 454 (539)
T ss_pred HhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Confidence 332111000 111122222222233332 1356788888888899999999999988898765
Q ss_pred C-CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHH
Q 012095 386 P-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKG 461 (471)
Q Consensus 386 p-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~ 461 (471)
+ .-+. +.++........ +. ......++.++|.+...+++.+.. ....-+||++++. ++++++.+++.|.+.
T Consensus 455 ~~~l~i-VcFr~~~~~~~~-~~--~~~ln~~l~~~l~~~G~~~vs~t~-~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 455 TRYFSL-VCFRLAPVDGDE-DQ--CNERNRELLAAVNSTGKIFISHTA-LSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred CCceEE-EEEEecCCCCCH-HH--HHHHHHHHHHHHHhCCCEEEEeeE-ECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 4 4444 444543210000 00 000134666777666555555533 3334589999986 789999999999998
Q ss_pred HHhhC
Q 012095 462 LLTLR 466 (471)
Q Consensus 462 l~~~~ 466 (471)
..++.
T Consensus 530 a~~~~ 534 (539)
T PLN02590 530 ASKFT 534 (539)
T ss_pred HHHhc
Confidence 77654
No 336
>PRK06149 hypothetical protein; Provisional
Probab=99.68 E-value=6.4e-14 Score=156.01 Aligned_cols=349 Identities=15% Similarity=0.117 Sum_probs=206.4
Q ss_pred cCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
.|+.+||+..|...++. ++.+.+++.+++....+. .. ...+....+++.+.+.... ..+.++++++++++...+
T Consensus 583 dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~--~~-~~~~~~~elae~L~~~~p~--~~~~v~f~~SGsEA~e~A 657 (972)
T PRK06149 583 AGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTN--SR-FHYAAVAEFSERLAALAPD--GLDTVFLVNSGSEANDLA 657 (972)
T ss_pred CCCEEEECCCCccccCCCCHHHHHHHHHHHHhcccc--cc-ccCHHHHHHHHHHHHhCCC--CcCEEEEeCCchHHHHHH
Confidence 57889999988766663 789999999988763322 11 1234556667666654421 236899999999999998
Q ss_pred HHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------EEEEecCCCC--CCCc-CC-----HHHHHhhhc-
Q 012095 172 VLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------TPVILPTRIS--ENFL-LD-----PKVLESKLT- 226 (471)
Q Consensus 172 ~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------~~~~v~~~~~--~~~~-ld-----~e~l~~~l~- 226 (471)
++... .....|+..+-+|++....+... +. .+..++.... ..|. .+ .+.+++.+.
T Consensus 658 lklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 658 IRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred HHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 88431 12356777787787654322111 10 0122222110 0121 11 233333332
Q ss_pred -----cCCcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecC
Q 012095 227 -----EKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (471)
Q Consensus 227 -----~~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (471)
+++.+|++... ++-.....+++.+++|.++|++| |+++|.||++.++--.|.....+....-..| +-+|
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~-g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD----ivt~ 812 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR-GGVCIADEVQVGYGRLGHYFWGFEQQGVVPD----IITM 812 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEEeehhcCCccCccchhhhhcCCCCC----EEEe
Confidence 23344544333 44444678899999999999999 9999999999765322221111111111112 3378
Q ss_pred CcccCccchhheeeEcCHHHHHHHHHHH-hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC--
Q 012095 301 SKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 377 (471)
Q Consensus 301 SK~~g~~G~R~G~v~~~~~~i~~l~~~~-~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-- 377 (471)
+|.+| .|..+|.+++++++++.+.... ...+++.++++.+++.+.|+.-.. + ++.+..++.-+++.+.|++
T Consensus 813 gK~lg-~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~-e----~l~~~~~~~G~~l~~~L~~l~ 886 (972)
T PRK06149 813 AKGMG-NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE-E----KLQENARRVGDHLKARLEALA 886 (972)
T ss_pred ccccc-CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh-c----CHHHHHHHHHHHHHHHHHHHH
Confidence 99998 8899999999999998876311 123457899999999998874211 1 2333333333444444433
Q ss_pred --CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHH
Q 012095 378 --LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQA 453 (471)
Q Consensus 378 --~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~ 453 (471)
.+-+..+... |+++-+.+-..... .+. .......+++.|+++ ||++.+.... .+.+||... .+++++++
T Consensus 887 ~~~~~i~~vrG~-Gl~~gvel~~~~~~-~~~--~~~~~~~i~~~l~~~-Gvl~~~~g~~--~~vl~~~Ppl~it~~~id~ 959 (972)
T PRK06149 887 DRHPLIGAVHGM-GLYLGVELVRDRQT-LEP--ATEETAAICDRLLEL-GVIMQPTGDH--LNILKIKPPLCLDRESADF 959 (972)
T ss_pred HhCCCeEEEeec-ceEEEEEEecCccc-CCC--ChHHHHHHHHHHHhC-CeEEeecCCC--CCEEEEECCCcCCHHHHHH
Confidence 3323223333 44455555211000 000 001245678888876 9999874221 367898776 49999999
Q ss_pred HHHHHHHHHHh
Q 012095 454 AVERIKKGLLT 464 (471)
Q Consensus 454 ~~~~l~~~l~~ 464 (471)
++++|.+++.+
T Consensus 960 ~~~~l~~~l~~ 970 (972)
T PRK06149 960 FVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 337
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=6.5e-14 Score=133.86 Aligned_cols=338 Identities=16% Similarity=0.113 Sum_probs=222.7
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|.|=..++- .++.+.+|.-..+.+.. .-|+...-..++.+...++.++.||. +--|+-..+|++..
T Consensus 27 ~~ieLIASEN~--~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga--~~anVQPhSGs~AN- 101 (413)
T COG0112 27 EHIELIASENF--TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA--EYANVQPHSGSQAN- 101 (413)
T ss_pred hceeeeecccc--CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCC--CccccCCCCchHHH-
Confidence 45777666665 46678888877776532 23444455667777777888888884 44577777777765
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcC--CEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcc
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD--ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTG 242 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG 242 (471)
..++.+|++|||+|+-.+-.+.++... +...| .+.+.++++.+ +..+|.|++++... .+||+|+.-.-.. -
T Consensus 102 ~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~IDyD~~~k~a~e~kPK~ii~G~SaY--~ 178 (413)
T COG0112 102 QAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLIDYDEVEKLAKEVKPKLIIAGGSAY--S 178 (413)
T ss_pred HHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccCHHHHHHHHHHhCCCEEEECcccc--c
Confidence 458889999999999777666555422 22223 46777787754 45799999999874 5899887521111 2
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH-HHH
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFV 321 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i 321 (471)
..++ ++++.++|.+. +.++++|-+|......+..+++.... ..++.+|..|+| .|-|-|.+.+++ ++.
T Consensus 179 r~id---~~~~reIad~V-GA~L~~DmAHiaGLVA~G~~p~P~~~-----AdvVTtTTHKTl--rGPrGG~Il~~~eel~ 247 (413)
T COG0112 179 RPID---FKRFREIADEV-GAYLMVDMAHVAGLIAGGVHPNPLPH-----ADVVTTTTHKTL--RGPRGGIILTNDEELA 247 (413)
T ss_pred cccC---HHHHHHHHHHh-CceEEehHHHHHHHHhcccCCCCCCc-----cceEeCCcccCC--CCCCceEEEeccHHHH
Confidence 3445 88889999999 99999999987433333233333222 338999999997 788999999985 888
Q ss_pred HHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-CcceEEeEecCCcc
Q 012095 322 AACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFSTYY 400 (471)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~~g~~~~~~~~~~~ 400 (471)
+++.+..-+...+ +++...++..+..-.+..+...++..++..++.+.|.+.|.+. |+++... ..+..+.+++...
T Consensus 248 kkin~aVFPg~qg-gpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~- 324 (413)
T COG0112 248 KKINSAVFPGLQG-GPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSK- 324 (413)
T ss_pred HHhhhhcCCccCC-ChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccC-
Confidence 8888755444433 3344444433333211123334666677778888888888886 8887642 2245567777631
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC------CCCcEEEEeec------CHHHHHHHHHHHHHHHHhh
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG------DDTCIRISYAA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~------~~~~iRis~~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
+ -.-.-++.+|++.||.+.--.... .+..|||.... .++++++..+-|.+++...
T Consensus 325 ~----------~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 325 G----------LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred C----------CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhcc
Confidence 1 123455667788899886543322 23579997653 5678888888888887653
No 338
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.67 E-value=2.4e-14 Score=129.41 Aligned_cols=299 Identities=15% Similarity=0.185 Sum_probs=201.9
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~ 213 (471)
+..+.+.+++++ .-+.+-+|+|+.++=+.++.++|++||.|+++..++.+..-++..+|+++..||-.....
T Consensus 63 I~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 63 IKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred HHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCc
Confidence 356666677775 346889999999999999999999999999999998888889999999999999765567
Q ss_pred CcCCHHHHHhhhcc-------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 214 FLLDPKVLESKLTE-------KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 214 ~~ld~e~l~~~l~~-------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
|.+++|...+.+.+ .+.+.++++|..-.|...+ -++++++|+++ ++.++..-+|.- |.-+.+...
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akkva~ic~e~-gvPlllN~AYt~----Grmpvs~ke 206 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKKVAKICREY-GVPLLLNCAYTV----GRMPVSGKE 206 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHHHHHHHHHc-CCceEeecceee----ccccccccc
Confidence 89999988887742 3667778999777888877 88999999999 999999999986 333344444
Q ss_pred CCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH-hcc--------cCCCChHHHHHHHHHHhccCCChHHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQF--------TSGASSISQKAGVAALGLGYAGGEVV 357 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~-~~~--------~~~~~~~~q~aa~~~L~~~~~~~~~~ 357 (471)
+. ..++++|-.|+++ +.-.+|.+..+.++.+.+.+.. ..+ ..+.-......+.+.+-. -.+.+
T Consensus 207 ~g----~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~---V~eRV 278 (382)
T COG1103 207 IG----ADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPH---VVERV 278 (382)
T ss_pred cC----CCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHH---HHHHH
Confidence 43 3489999999998 4458999999999888776543 111 111111111111221111 01122
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeee--CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEE-EECCCCC
Q 012095 358 SKMVKAFRERRDFLVKSFGELEGVKMS--EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA-LVPGDAF 434 (471)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~~~g~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~-v~pg~~f 434 (471)
.+.-++. ++.+++.+.|+++.|+.-. .|..--.+.+..|.......+-. ...--+.+.|.++ ||. +.||
T Consensus 279 krWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~---r~gyFlY~ELK~R-gI~GI~~G--- 350 (382)
T COG1103 279 KRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHK---RKGYFLYEELKKR-GIHGIQPG--- 350 (382)
T ss_pred HHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCc---CCceeeHHHHHhc-CccccccC---
Confidence 2222222 3455778888888555432 34333334444443211000000 0122455666665 553 4554
Q ss_pred CCCCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 435 GDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 435 ~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
...+|.+|.-. +.|+++..+++++++++++
T Consensus 351 -~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 351 -QTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred -ceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 35789999776 9999999999999998875
No 339
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=3.6e-14 Score=149.20 Aligned_cols=156 Identities=21% Similarity=0.201 Sum_probs=116.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH-HHHcCCEEEEecCCCCCCCc----CCHH-----HHHh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRISENFL----LDPK-----VLES 223 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~~~~~~----ld~e-----~l~~ 223 (471)
.....+++||+|.++..++.+++.+||.||++..+|-+..+. +.+.|++++++.... +.|+ ++.+ .+++
T Consensus 189 Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~ 267 (720)
T PRK13578 189 ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-NPFGFIGGIDAHCFDEEYLRE 267 (720)
T ss_pred CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-cccCCcCCCChHHccHHHHHH
Confidence 446789999999999999999999999999999999998885 899999999997654 3343 3544 4888
Q ss_pred hhccC----------CcEEEEcCCCCCcccCCCHHHHHHHHHH-HHhCCCeEEEEccCCCc-cccCCC---CccccccCC
Q 012095 224 KLTEK----------SRLLILCSPSNPTGSVYPKNLLDEIARI-VAKHPRLLVLSDEIYEH-IIYAPA---THTSFASLP 288 (471)
Q Consensus 224 ~l~~~----------~~~i~i~~p~NPtG~~~~~~~l~~i~~l-~~~~~~~~ii~De~y~~-~~~~~~---~~~~~~~~~ 288 (471)
++.+. .++++|++|+. -|.+++ +++|+++ ++.+ + .|++||||+. +.|.+. .+.+.....
T Consensus 268 ~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~-~-~llvDEAhgah~~F~p~~~~~p~~al~~G 341 (720)
T PRK13578 268 QIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLC-D-YILFDSAWVGYEQFIPMMADCSPLLLELN 341 (720)
T ss_pred HHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccC-C-cEEEeCcchhhhccCcccccCChhhhhcC
Confidence 77543 48899999987 899999 8888888 6777 7 8999999884 334432 111222233
Q ss_pred CCCCceEEEecCCcccCccchhhe-eeEcCH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLG-YIAGPK 318 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~ 318 (471)
.+...++++.|..|.+ +++.-+ ++....
T Consensus 342 aD~p~i~v~QStHKtL--~alTQaS~LHvk~ 370 (720)
T PRK13578 342 ENDPGIFVTQSVHKQQ--AGFSQTSQIHKKD 370 (720)
T ss_pred CCCCCeEEEEChhhcc--hhhhhHhhhhcCC
Confidence 3334679999999997 455544 444433
No 340
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.67 E-value=3e-14 Score=140.88 Aligned_cols=330 Identities=16% Similarity=0.138 Sum_probs=192.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-C------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcE-EEeCChHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-T------RYTPNAGTLELRSAICHKLKEENGLSYTPDQI-LVSNGAKQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i-~it~G~~~a 167 (471)
..|+|-..++.. ++.+.+++...+.+.. . .|+...-..++.+...++..+.||..-+.+.+ +-..+++.|
T Consensus 21 ~~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 21 STLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp HSEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred cCccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 358888777653 4566666655554322 1 13223334567777777888888854222322 223456667
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHH---H--H-----HHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcC
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE---M--A-----RIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCS 236 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~---~--~-----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~ 236 (471)
...++.+|++|||+|+..++...++.. . . .....+.+.++++++ ++.+|.|++++.+. .+||+|++..
T Consensus 99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kPklIi~G~ 177 (399)
T PF00464_consen 99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKPKLIICGA 177 (399)
T ss_dssp HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--SEEEEE-
T ss_pred HHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCCCEEEECc
Confidence 888999999999999988776654431 1 1 234468888998864 46799999999875 4899888743
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
-.+|- .++ ++++.++|++. +.+|+.|-+|.. ++.++. .++.... -.++.+|..|+| +|-|-|.+.
T Consensus 178 S~y~~--~~d---~~~~reIad~v-ga~l~~D~sH~~GLIa~g~-~~~P~~~-----ADvvt~sThKtl--~GPrggiI~ 243 (399)
T PF00464_consen 178 SSYPR--PID---FKRFREIADEV-GAYLMADISHIAGLIAGGL-FPNPFPY-----ADVVTGSTHKTL--RGPRGGIIL 243 (399)
T ss_dssp SSTSS--------HHHHHHHHHHT-T-EEEEE-TTTHHHHHTTS-S--GCCT-----SSEEEEESSGGG---SSS-EEEE
T ss_pred hhccC--ccC---HHHHHHHHHhc-CcEEEecccccccceehhe-ecCcccc-----ceEEEeeccccc--cccCceEEE
Confidence 33322 334 78899999999 999999999874 333443 3333222 228999999997 788999999
Q ss_pred cC--------------HHHHHHHHHHHhcccCCCChHHHHHHH-HHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 316 GP--------------KHFVAACNKIQSQFTSGASSISQKAGV-AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 316 ~~--------------~~~i~~l~~~~~~~~~~~~~~~q~aa~-~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
++ +++.+++.+..-+...+.+.....++. .+|.+. .....++..++.-++.+.|.+.|.+. |
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea--~~~~fk~Ya~qVv~NAk~La~~L~~~-G 320 (399)
T PF00464_consen 244 TNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEA--LSPEFKEYAKQVVKNAKALAEALQER-G 320 (399)
T ss_dssp ES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred EcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcc--cCHHHHHHHHHHHHHHHHHHHHHhhC-C
Confidence 99 789999988765554443444333333 334331 12334677777888899999999887 8
Q ss_pred CeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEeec------CH
Q 012095 381 VKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYAA------SL 448 (471)
Q Consensus 381 ~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----~~~~iRis~~~------~~ 448 (471)
+++.. ...+..+|+++... + .+..+ ++..+++.||.+..-...+ ....|||.... .+
T Consensus 321 ~~v~~ggTd~H~vlvd~~~~-~---------~~g~~-a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e 389 (399)
T PF00464_consen 321 FKVVTGGTDNHQVLVDLRSF-G---------IDGKE-AEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKE 389 (399)
T ss_dssp -EEGGGS-SSSEEEEEGGGG-T---------S-HHH-HHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--H
T ss_pred cEEEECCCCCCeEEEEeccc-c---------cchHH-HHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCH
Confidence 88763 23356688898643 1 14444 4456778899885422221 23579998764 45
Q ss_pred HHHHHHHH
Q 012095 449 TTLQAAVE 456 (471)
Q Consensus 449 e~i~~~~~ 456 (471)
+++++..+
T Consensus 390 ~dm~~iA~ 397 (399)
T PF00464_consen 390 EDMKEIAE 397 (399)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666544
No 341
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.64 E-value=4.8e-15 Score=147.10 Aligned_cols=234 Identities=21% Similarity=0.245 Sum_probs=142.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 214 (471)
.+..+.+|+. || .....++++|+|.++..++.++++|||.|+++..+|-+....+.+.|+++++++.. ++.+
T Consensus 69 ~eAe~~aA~~----fG---Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~~~ 140 (417)
T PF01276_consen 69 KEAEELAARA----FG---ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DNEY 140 (417)
T ss_dssp HHHHHHHHHH----HT---ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-TT
T ss_pred HHHHHHHHHh----cC---CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-cccc
Confidence 3444444444 55 45678999999999999999999999999999999999999999999999999875 3333
Q ss_pred ----cCCH-----HHHHhhhcc--CCcE---EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCC
Q 012095 215 ----LLDP-----KVLESKLTE--KSRL---LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPA 279 (471)
Q Consensus 215 ----~ld~-----e~l~~~l~~--~~~~---i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~ 279 (471)
.+++ +.+++++++ ..|+ ++|++|++ -|.+++ +++|+++|+++ +..|++||||+. +.|. .
T Consensus 141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEAhGah~~F~-~ 214 (417)
T PF01276_consen 141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKH-GIPLLVDEAHGAHFGFH-P 214 (417)
T ss_dssp S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCT-ECEEEEE-TT-TTGGCS-G
T ss_pred CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhccc-CCEEEEEccccccccCC-C
Confidence 3466 899998864 3344 99999987 899999 99999999999 999999999884 3343 1
Q ss_pred CccccccCC---CCCCceEEEecCCcccCccchhhe-eeEcCHH---HHHHHHHHHhc-ccCCCChHHHHHHHHHHhccC
Q 012095 280 THTSFASLP---GMWERTLTVNGFSKAFAMTGWRLG-YIAGPKH---FVAACNKIQSQ-FTSGASSISQKAGVAALGLGY 351 (471)
Q Consensus 280 ~~~~~~~~~---~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~---~i~~l~~~~~~-~~~~~~~~~q~aa~~~L~~~~ 351 (471)
...+...+. .....++++.|..|++ +++.-+ ++....+ -.+++.+.... .+.+|+.+..+..-.+...-
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m- 291 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMASLDVARAQM- 291 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHH-
T ss_pred CccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH-
Confidence 112222221 1234679999999997 566654 4444433 23445443322 23344444333322222110
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHh---cCCCCCeeeCC
Q 012095 352 AGGEVVSKMVKAFRERRDFLVKSF---GELEGVKMSEP 386 (471)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L---~~~~g~~~~~p 386 (471)
....-+++.++..++.+.+++.+ +++.++++..|
T Consensus 292 -~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 292 -EEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred -hhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 01112223333344444444444 66666665544
No 342
>PRK15029 arginine decarboxylase; Provisional
Probab=99.64 E-value=2.7e-13 Score=144.12 Aligned_cols=154 Identities=15% Similarity=0.160 Sum_probs=118.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC----cCC-----HHHHHhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF----LLD-----PKVLESK 224 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~----~ld-----~e~l~~~ 224 (471)
.....+++||+|.++..++.+++.+||.|+++..+|-+..+.+.+.|+++++++... +.+ .++ ++.++++
T Consensus 220 A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~-~~~Gi~~~i~~~~~~~e~i~~~ 298 (755)
T PRK15029 220 ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR-NRYGIIGPIYPQEMQPETLQKK 298 (755)
T ss_pred CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCCccCCCccccCHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999997543 222 234 8899988
Q ss_pred hcc--CCc--------EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccC-----C
Q 012095 225 LTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASL-----P 288 (471)
Q Consensus 225 l~~--~~~--------~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~-----~ 288 (471)
+.. ..+ +++|++|++ -|.+++ +++|+++|+++ ++.|++||||+. +.|.+.-+ ....+ .
T Consensus 299 l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~-~~~llvDEAhGah~~F~~~~p-~~sa~~~~~~~ 372 (755)
T PRK15029 299 ISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKT-SDRLHFDEAWYGYARFNPIYA-DHYAMRGEPGD 372 (755)
T ss_pred HHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhc-CCeEEEECccccccccCcccc-ccccccccccc
Confidence 843 233 899999987 899999 99999999999 999999999874 44543211 11112 1
Q ss_pred CCCCceEEEecCCcccCccchhhee-eEc
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGY-IAG 316 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~-v~~ 316 (471)
...-.++++.|..|++ +++.-|. +..
T Consensus 373 ~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 373 HNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cCCCceEEEEchhhcc--cchhhhhhhee
Confidence 0112349999999997 5666554 444
No 343
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.64 E-value=3.3e-13 Score=144.55 Aligned_cols=313 Identities=16% Similarity=0.145 Sum_probs=197.7
Q ss_pred CCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh----cC---C-CCeEEEcCCCCCChHH
Q 012095 126 TRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV----CS---P-GDEVIIPAPFWVSYPE 194 (471)
Q Consensus 126 ~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l----~~---~-gd~Vlv~~p~y~~~~~ 194 (471)
+-|.| .+|+.++...+.+++.+..|.+.. .+.. +++..+.+..++++ +. + .+.|+++.-.|.+...
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd~~--Sl~p-~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa 606 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFDAI--CMQP-NSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA 606 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCCeE--eecC-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH
Confidence 66777 799999999999999999886533 2222 24444443444443 22 2 2678899988866666
Q ss_pred HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 012095 195 MARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (471)
Q Consensus 195 ~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y 271 (471)
.+...|++++.++.+.+ ..+|+++|+++++ +++.+|.+.+|++-++.. +.+++|+++|+++ +.++++|-++
T Consensus 607 sa~~~GieVv~Vp~D~~--G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~-Galv~vDgA~ 680 (954)
T PRK12566 607 SAQMAGMRVVIVECDPD--GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQH-GGQVYMDGAN 680 (954)
T ss_pred HHHHCCCEEEEeccCCC--CCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHc-CCEEEEEeeC
Confidence 78889999999999743 3699999999987 566677788888755443 4499999999999 9999999988
Q ss_pred CccccCCCCccccccCCCCCCceEEEecCCcccCc----cchhheeeEcCHHHHHHHHHHH------------hcccCCC
Q 012095 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNKIQ------------SQFTSGA 335 (471)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~R~G~v~~~~~~i~~l~~~~------------~~~~~~~ 335 (471)
..-.. . ...++..+-.++++++.|+|+. .|.-+|.+.+.+++...+..+- .....+.
T Consensus 681 ~~a~~------~-l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~ 753 (954)
T PRK12566 681 LNAQV------G-LARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPW 753 (954)
T ss_pred hhhcc------C-CCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeeccc
Confidence 52111 1 1112234556999999998852 2344566555555444443221 0001111
Q ss_pred Ch-HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCC
Q 012095 336 SS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIEN 412 (471)
Q Consensus 336 ~~-~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~ 412 (471)
+. ....++..++..- ..+ +.+....-..+.+++.+.|.+..++.+.++.+.+| +.+++....+ ..+ .+
T Consensus 754 gsa~~l~~A~~Yi~~l--G~e-Lk~aa~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~--~~g----~~ 824 (954)
T PRK12566 754 GSASILPISWMYIAMM--GPQ-LADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKA--QTG----IS 824 (954)
T ss_pred chHHHHHHHHHHHHHH--CHH-HHHHHHHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEcccccc--ccC----CC
Confidence 11 1122233333321 234 55555555678888999987744555533333322 1233322100 001 26
Q ss_pred HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 413 SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 413 ~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
..++.++|++ +||...- ..|-..+++|++... ++++|+++++.|.++.++.
T Consensus 825 ~~dvakRL~d-~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 825 EEDVAKRLMD-YGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HHHHHHHHHH-CCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 6889999994 5886443 344457899999886 8899999999998888763
No 344
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.64 E-value=2.1e-13 Score=139.16 Aligned_cols=339 Identities=11% Similarity=0.093 Sum_probs=192.1
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHH--HHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 93 AGVSVIRLAAGEP--DFDT-PVLIA--EAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~-p~~v~--~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
.|+.+||+..|.. .++. ++.+. +++.+++.+.... .....-..+....+++.+.+..+. -..+.+++++++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~v~f~~sGsE 114 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGD-PALPHLFFIEGGAL 114 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCC-CCcCEEEEeCCcHH
Confidence 5788999888863 3443 67787 8888888753211 111111233334455555443211 13468999999999
Q ss_pred HHHHHHHHhcC--------C------CCeEEEcCCCCCChHHHHHHc-CCE-EE--EecC--------C----C--CCCC
Q 012095 167 SILQAVLAVCS--------P------GDEVIIPAPFWVSYPEMARIA-DAT-PV--ILPT--------R----I--SENF 214 (471)
Q Consensus 167 al~~~~~~l~~--------~------gd~Vlv~~p~y~~~~~~~~~~-G~~-~~--~v~~--------~----~--~~~~ 214 (471)
+++.+++.... . +..|+....+|++....+... |.. .. ..|. . + ...+
T Consensus 115 Ave~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 194 (431)
T TIGR03251 115 AVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNL 194 (431)
T ss_pred HHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccccc
Confidence 99988886521 1 367999999888776444322 211 00 0111 0 0 0000
Q ss_pred c-------CCHHHHHhhhc---cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc
Q 012095 215 L-------LDPKVLESKLT---EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS 283 (471)
Q Consensus 215 ~-------ld~e~l~~~l~---~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~ 283 (471)
. -+++++++.+. +++.++++...+.-.|. ..+++.+++|.++|++| |+++|.||++..+...|.. ..
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEV~tG~GrtG~~-~a 272 (431)
T TIGR03251 195 DQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEH-DALLIFDEVQTGVGLTGTA-WA 272 (431)
T ss_pred chhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecchhccCccchH-HH
Confidence 0 12444555553 35566666544555665 56888999999999999 9999999999976443321 11
Q ss_pred cccCCCCCCceEEEecCCcccCccchhheeeEcCH--HHHHHHHH--HHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 284 FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK--HFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 284 ~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~--~~i~~l~~--~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
+..+.-..| ++ +++|.+. .| |++.+.+ ++.+.... .....+++.++++..++.+.|+.-.. +..+++
T Consensus 273 ~~~~gv~PD--i~--~~gK~~~-~~---g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~-~~l~~~ 343 (431)
T TIGR03251 273 YQQLGVQPD--IV--AFGKKTQ-VC---GIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE-ERLVDN 343 (431)
T ss_pred HHhcCCCCC--EE--EecccCc-cc---eEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHh-cCHHHH
Confidence 111111112 33 4789863 33 6665543 22221111 11234567888998888888874110 122333
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012095 360 MVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 438 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~ 438 (471)
..+.-+..++.|.+...+.+++. ..... |.++.+.++.. .....+.+.|+++ ||++.|.. .+
T Consensus 344 ~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~~~i~~~~~-----------~~~~~~~~~l~~~-Gvl~~~~g----~~ 406 (431)
T TIGR03251 344 ARVQGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPST-----------ADRDEVIRQLYRE-GVLLLGCG----ER 406 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCccceeccccc-ceeEEEEeCCH-----------HHHHHHHHHHHhC-CeEEecCC----CC
Confidence 33333334444443333343232 22333 44566677532 1345688888865 99998753 24
Q ss_pred cEEEEeec--CHHHHHHHHHHHHH
Q 012095 439 CIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 439 ~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
.+|++... +++++++++++|.+
T Consensus 407 ~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 407 SIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eEEEECCccCCHHHHHHHHHHHHh
Confidence 68887664 89999999999875
No 345
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.63 E-value=2.5e-13 Score=148.79 Aligned_cols=308 Identities=17% Similarity=0.171 Sum_probs=196.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeC-ChHHHHHHHHHHh----cCCCC----eEEEcCCCCCChHHHHHHcCCE
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSN-GAKQSILQAVLAV----CSPGD----EVIIPAPFWVSYPEMARIADAT 202 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~-G~~~al~~~~~~l----~~~gd----~Vlv~~p~y~~~~~~~~~~G~~ 202 (471)
+|..++...+.+++.+..|.+ ++.+.. |++++....+.++ .++|| .|++++..|.+....+...|.+
T Consensus 538 qG~l~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~ 613 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK 613 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence 567888899999999988853 455544 5555543333332 25665 5999999998888889999999
Q ss_pred EEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC
Q 012095 203 PVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA 279 (471)
Q Consensus 203 ~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~ 279 (471)
++.++++.+ ..+|+++|++++++ ++.+|++.+|++-++...+ +++|+++|+++ ++++++|.++......
T Consensus 614 vv~v~~d~~--G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~-G~~v~VDgA~~~al~~-- 685 (954)
T PRK05367 614 VVVVACDEN--GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEH-GGQVYLDGANMNAQVG-- 685 (954)
T ss_pred EEEECCCCC--CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHc-CCEEEEECcChhhccC--
Confidence 999998743 46999999999965 4567778888875444567 99999999999 9999999999632111
Q ss_pred CccccccCCCCCCceEEEecCCcccCc----cchhheeeEcCHHHHHHHHHHH-----h---cccCCCChHHHHH----H
Q 012095 280 THTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNKIQ-----S---QFTSGASSISQKA----G 343 (471)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~R~G~v~~~~~~i~~l~~~~-----~---~~~~~~~~~~q~a----a 343 (471)
+. -++..+-.+++.|..|+|+. .|--+|++.+.+.+...+-... . ....+.+.+.|.. +
T Consensus 686 ----l~-~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a 760 (954)
T PRK05367 686 ----LA-RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPIS 760 (954)
T ss_pred ----CC-ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHH
Confidence 11 11123445888899999752 3444778877765554432210 0 0111112222211 1
Q ss_pred HHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCCHHHHHHHHH
Q 012095 344 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (471)
Q Consensus 344 ~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll 421 (471)
..++.. ...+.+++..+..-.+.+++.+.|.+..++.+..|.+.++ +.++++.... ..+ .+..++.++|.
T Consensus 761 ~~yi~~--~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~--~~g----~~~~di~krL~ 832 (954)
T PRK05367 761 WMYIRM--MGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKE--STG----ITVDDIAKRLI 832 (954)
T ss_pred HHHHHH--HCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccc--cCC----CCHHHHHHHHH
Confidence 222221 1345666666666688889999987743444433322111 2233321100 000 25688999986
Q ss_pred HcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 422 DKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 422 ~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+ +|+...- ..|-.++.+||+... ++++|+++++.|.++..+..
T Consensus 833 d-~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 833 D-YGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred H-CCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHH
Confidence 5 4886544 234457889998886 88999999999988877653
No 346
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=2e-14 Score=136.31 Aligned_cols=341 Identities=21% Similarity=0.258 Sum_probs=230.9
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHc-CC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIRE-GF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~-~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+++++|++.+ ..+...+++++.+...+.+ |. .-|+...-...|.+.|++++ | .++.|+.+.|-
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G---~E~aivYs~gF 164 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----G---TEDAIVYSYGF 164 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh----C---Ccceeeecccc
Confidence 678899998776 6676678888888777765 22 22554444566777777776 4 67889998887
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCC------------c-E
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS------------R-L 231 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~------------~-~ 231 (471)
+. +..++.++++.||.|.+.+-........+++..-.++++..+ |.+.++..+.+.+ + .
T Consensus 165 ~t-i~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~Rrf 236 (467)
T KOG1358|consen 165 ST-IESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALTRRF 236 (467)
T ss_pred ch-hhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccceEE
Confidence 75 566889999999999999887777777788888888887753 6667766653322 3 3
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC--CCccccccCCCCCCceEEEecCCcccCccch
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
|++..-.-+||...+ +.+|+++..|| ...||.||.|+....+. .+.......+ ..+-.++++|+.-+++..|
T Consensus 237 iv~EGl~~N~g~i~p---l~~iv~lk~Ky-k~RvildEs~SfG~lg~~GrGvteH~~v~-~~~iDiv~~sm~~alas~G- 310 (467)
T KOG1358|consen 237 IVVEGLYANTGDICP---LPEIVKLKNKY-KFRVILDESLSFGVLGKTGRGVTEHFGVP-ITDIDIVTASMETALASGG- 310 (467)
T ss_pred EEEEeeccCCCcccc---cHHHHHHHhhh-eEEEEEecccccccccccCccccccCCCC-ccceeeeeecccccccccC-
Confidence 444444566999999 99999999999 99999999999766543 3333333343 2466789999999998777
Q ss_pred hheeeEcCHHHHH--HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 310 RLGYIAGPKHFVA--ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 310 R~G~v~~~~~~i~--~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
||++|+.-+++ ++......+..+.++....++..++.. .+|-.++.+.++.....+.+.|....|+.+....
T Consensus 311 --gFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i----~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~ 384 (467)
T KOG1358|consen 311 --GFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI----EEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSP 384 (467)
T ss_pred --ceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH----HhhCcchhhhhhccccccchhhhcCCceEEecCc
Confidence 99888543332 333333334445566666666666663 4555556666666666677777776677765433
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC------CCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG------DDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~------~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
-...+.+.+.+..+...+. ..--++++++++.+ |+.++....-. .+.-+||++.+ ++|+++++.+.|+
T Consensus 385 ~SPi~hl~l~~~~~s~e~e---~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik 460 (467)
T KOG1358|consen 385 ESPIIHLQLERSYGSREKE---EKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIK 460 (467)
T ss_pred CCceeeeeecccccchHHH---HHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 3333455554321110000 00235677777777 88877655331 23579999987 9999999999999
Q ss_pred HHHHh
Q 012095 460 KGLLT 464 (471)
Q Consensus 460 ~~l~~ 464 (471)
++...
T Consensus 461 ~~~~~ 465 (467)
T KOG1358|consen 461 EVASA 465 (467)
T ss_pred HHHHh
Confidence 87654
No 347
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.8e-13 Score=129.50 Aligned_cols=219 Identities=15% Similarity=0.179 Sum_probs=155.0
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v 206 (471)
++-...|.+.|+.+-. |. --+.+.+++.++..++..++++||+|+...--|.+... .++..|.++.++
T Consensus 61 NPT~~vlE~RiAaLEG---G~-----aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fv 132 (426)
T COG2873 61 NPTTDVLEERIAALEG---GV-----AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFV 132 (426)
T ss_pred CchHHHHHHHHHHhhc---ch-----hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEe
Confidence 3445677787877642 31 34556778888999999999999999998887776554 457889999999
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
.. .|++.++++++++||+||+.+-.||.+.+.+ +++|+++|++| ++++|+|..+.. + ..+..
T Consensus 133 d~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~-gvpliVDNT~at----p---yl~rP 194 (426)
T COG2873 133 DP-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRH-GVPLIVDNTFAT----P---YLCRP 194 (426)
T ss_pred CC-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHc-CCcEEEecCCCc----c---eecch
Confidence 64 3899999999999999999999999999999 99999999999 999999998863 1 11222
Q ss_pred CCCCCCceEEEecCCcccCccchhheeeEcCH---HH---------------------HH---------HH-HHHHhccc
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---HF---------------------VA---------AC-NKIQSQFT 332 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~---~~---------------------i~---------~l-~~~~~~~~ 332 (471)
+ +.+-.|++.|.+|.+|=.|--+|=++.+. ++ .+ +. ....+...
T Consensus 195 ~--~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlG 272 (426)
T COG2873 195 I--EHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLG 272 (426)
T ss_pred h--hcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhcc
Confidence 2 24556999999999976777777555321 11 11 00 11122334
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
.+.+++.......- .+-+.-..++.-++...+.+.|++.|.+.|+
T Consensus 273 a~lsPfnAfl~lqG-------lETL~LRmerH~~NA~~vA~~L~~HpkV~~V 317 (426)
T COG2873 273 ATLSPFNAFLLLQG-------LETLSLRMERHCENALKVAEFLENHPKVAWV 317 (426)
T ss_pred cccCcHHHHHHHhc-------hhhhHHHHHHHHHhHHHHHHHHhcCCCeeee
Confidence 44555543332222 2334445566667778888899888776654
No 348
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.63 E-value=3.4e-13 Score=133.16 Aligned_cols=348 Identities=16% Similarity=0.166 Sum_probs=220.0
Q ss_pred HHHHHHHhcCCCeEEcCCCC---------CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 85 DQATALAQAGVSVIRLAAGE---------PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~---------~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
++.+.+++.|.+...|...+ -.-.+.+..++++.. +...|+.++...+|.+.+++.+. .
T Consensus 22 ~R~~~l~~agyN~f~l~s~dV~IDLrSDTgT~apS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~G--------~ 89 (467)
T TIGR02617 22 YREKAIIKAGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIFG--------Y 89 (467)
T ss_pred HHHHHHHHcCCCcccCCCCCeEEECccCCCCCCCCHHHHHHHHc----CCcccccCchHHHHHHHHHHHhC--------C
Confidence 33445556666555555544 221234556665553 66789888889999999999863 3
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCC--------CCCChHHHHHHcCCEEEEecCC--------CCCCCcCCH
Q 012095 156 DQILVSNGAKQSILQAVLAVCS-PGDEVIIPAP--------FWVSYPEMARIADATPVILPTR--------ISENFLLDP 218 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p--------~y~~~~~~~~~~G~~~~~v~~~--------~~~~~~ld~ 218 (471)
+.++.|..+..+-.++++.+++ |||++.+..+ .|......+.+.|+.++.++.+ ......+|+
T Consensus 90 E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl 169 (467)
T TIGR02617 90 QYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDL 169 (467)
T ss_pred ceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCH
Confidence 4578887778888888999998 7888775553 2223345688899998876532 112346899
Q ss_pred HHHHhhhcc----CCcEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCeEEEEccC------CC----ccccCCCCccc
Q 012095 219 KVLESKLTE----KSRLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEI------YE----HIIYAPATHTS 283 (471)
Q Consensus 219 e~l~~~l~~----~~~~i~i~~p~N-PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~------y~----~~~~~~~~~~~ 283 (471)
++|++++++ +...+...-.+| -.|.++|.+.++++.++|++| |+.++.|.+ |. +-.+.+ .+
T Consensus 170 ~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~-GIplhLDgARl~nNA~fIk~rE~~a~~---~s 245 (467)
T TIGR02617 170 EGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY-DIPVVMDSARFAENAYFIKQREAEYKN---WS 245 (467)
T ss_pred HHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc-CCcEEEEhHHHHHHhhhhhhcchhhcC---CC
Confidence 999999974 222222211234 368999999999999999999 999999975 21 001222 22
Q ss_pred cccC----CCCCCceEEEecCCcccCcc-chhheeeEcCHH-HHHHHHHHHh--------cccCCCChHHHHHHHHHHhc
Q 012095 284 FASL----PGMWERTLTVNGFSKAFAMT-GWRLGYIAGPKH-FVAACNKIQS--------QFTSGASSISQKAGVAALGL 349 (471)
Q Consensus 284 ~~~~----~~~~~~~i~~~S~SK~~g~~-G~R~G~v~~~~~-~i~~l~~~~~--------~~~~~~~~~~q~aa~~~L~~ 349 (471)
+..+ ....| .+.-|+||.++.| | |+++++++ +.+.+.+.+. ....+.+.-...+++.-|.+
T Consensus 246 i~eI~rE~~~~aD--svt~slsKglgApvG---g~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 246 IEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred HHHHHHHhhccCC--EEEEEcCCCCCCccc---ceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 2221 11112 5667899999866 6 77777654 3333333222 11224555555555555654
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCCHHHHHHHHHHcCCEEE
Q 012095 350 GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCRYLLDKAQVAL 428 (471)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Ll~~~gV~v 428 (471)
.. .++++..... ..++|.+.|.+. |+.+.. .||.-++++....+ +.....+ .+..++-.|..+.||-.
T Consensus 321 ~~-~~~yl~~ri~----qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~lphip~~~f----pa~al~~~ly~~~GiR~ 389 (467)
T TIGR02617 321 GM-NLDWLAYRIN----QVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLLPHIPADQF----PAHALACELYKVAGIRA 389 (467)
T ss_pred cc-cHHHHHHHHH----HHHHHHHHHHhC-CCcEEe-cCccEEEEehhhhCCCCChhhC----cHHHHHHHHHHHcCcce
Confidence 32 2455544444 445666677666 888877 88888888743321 1111222 67888888888889863
Q ss_pred E-CCCC-CCC-----------CCcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012095 429 V-PGDA-FGD-----------DTCIRISYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 429 ~-pg~~-f~~-----------~~~iRis~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
. -|+. ++. -..+|+++.. |.+.++..+++|..+.++
T Consensus 390 ~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 390 VEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred EeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 3 3432 111 1479999987 889999999999888764
No 349
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.62 E-value=1.2e-13 Score=140.83 Aligned_cols=337 Identities=12% Similarity=0.036 Sum_probs=191.7
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHHH----HHhCCCCCCCcEEEeCC
Q 012095 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINA-IREGFTRYTPNAGTLELRSAICHKLK----EENGLSYTPDQILVSNG 163 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~----~~~g~~~~~~~i~it~G 163 (471)
..|+.+||+..|... ++. ++.+.+|+.++ ........ +.. .......+++.+. +... -.-+.++++++
T Consensus 55 ~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~-~~~-~~~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINR-PAL-GNFPSKDWAKILKEGILKVAP--KGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhccc-ccC-CcHHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence 368889999988743 343 78899999874 33222111 111 1223344454442 2222 12368999999
Q ss_pred hHHHHHHHHHHhcC--------------------------CC---CeEEEcCCCCCChHHHHHHc-CCE-----------
Q 012095 164 AKQSILQAVLAVCS--------------------------PG---DEVIIPAPFWVSYPEMARIA-DAT----------- 202 (471)
Q Consensus 164 ~~~al~~~~~~l~~--------------------------~g---d~Vlv~~p~y~~~~~~~~~~-G~~----------- 202 (471)
+++|.+.+++.... +| ..|+....+|++....+... |..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999887621 11 26898999998776544332 211
Q ss_pred EEEecCCCCC-CC-----------cCCHHHHHhhhcc---CCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEE
Q 012095 203 PVILPTRISE-NF-----------LLDPKVLESKLTE---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 203 ~~~v~~~~~~-~~-----------~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii 266 (471)
...+|..... .+ .-+++.+++++.. +..+|++...+...|... +++.+++|.++|++| |+++|
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~-g~lLI 289 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-NVAFI 289 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEE
Confidence 1112211000 00 0135667777742 345666554455567655 789999999999999 99999
Q ss_pred EccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHH
Q 012095 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 346 (471)
Q Consensus 267 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~ 346 (471)
.||++..+...|.. .......-..... +.+|+|.+| .| |++++.+ .+..........+++.++++..++.+.
T Consensus 290 ~DEV~tGfGrtG~~-fa~e~~gv~~~PD--i~t~gK~lg-~g---G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~ 361 (464)
T TIGR00699 290 VDEVQTGVGATGKF-WAHEHWNLDDPPD--MVTFSKKFQ-TA---GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREI 361 (464)
T ss_pred EeeeeeCCCCCcch-hHHHhcCCCCCCC--EEEehhhhc-cC---Cccccch-hccCCCCcccccCCCCCHHHHHHHHHH
Confidence 99999876333321 1111111100111 456899996 33 4544443 221111122334667888888888877
Q ss_pred HhccCCChHHHHHHHHHHHHHHHHHHHHhc----CCCC-CeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHH
Q 012095 347 LGLGYAGGEVVSKMVKAFRERRDFLVKSFG----ELEG-VKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 420 (471)
Q Consensus 347 L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~g-~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 420 (471)
|+.-.. + .+.+..++.-+++.+.|+ +.|. +.-.. ..-|+++-+.++.. .....+.+.+
T Consensus 362 L~~l~~-~----~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----------~~~~~i~~~~ 425 (464)
T TIGR00699 362 IQEIKR-K----DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----------AKRDKLLKKA 425 (464)
T ss_pred HHHHHh-c----CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----------HHHHHHHHHH
Confidence 764110 1 222233233333333333 2332 22222 13355566666531 0246788888
Q ss_pred HHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 421 LDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 421 l~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
+++ ||++.+. + .+.+||+... ++++|++++++|.+++
T Consensus 426 ~~~-Gvl~~~~---g-~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 426 RNN-GVNIGGC---G-VKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHC-CcEEecC---C-CCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 876 9998763 2 3679998775 9999999999998763
No 350
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.62 E-value=1.3e-12 Score=141.00 Aligned_cols=314 Identities=15% Similarity=0.106 Sum_probs=201.2
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc--------CCCCeEEEcCCCCCChH
Q 012095 125 FTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC--------SPGDEVIIPAPFWVSYP 193 (471)
Q Consensus 125 ~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~ 193 (471)
.+-|.|. +|+.++...+..++.+..|++ .--+..+|+.++-...++++- ...+.|+++.-.|.+..
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 3445543 678889999999999999965 222334455544443333332 12367999999998888
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
..++.+|.+++.++.+. ++.+|+++|++++++ ++++|++.+|+| +|..-+ .+++|+++|+++ +.++++|-+
T Consensus 593 asa~~~G~~Vv~V~~d~--~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~-G~~v~VDgA 666 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCDQ--DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSF-GGQVYLDGA 666 (939)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHc-CCEEEEEec
Confidence 88999999999999863 346999999999974 788999999999 777653 288999999999 899999999
Q ss_pred CCccccCCCCccccccCCCCCCceEEEecCCcccC----ccchhheeeEcCHHHHHHHHH--H-------------Hhcc
Q 012095 271 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA----MTGWRLGYIAGPKHFVAACNK--I-------------QSQF 331 (471)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g----~~G~R~G~v~~~~~~i~~l~~--~-------------~~~~ 331 (471)
+..-.. ...-++..+-.+++.|..|+|+ ..|--+|++.+.+++...+-. + ....
T Consensus 667 q~~al~-------~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s 739 (939)
T TIGR00461 667 NMNAQV-------GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVS 739 (939)
T ss_pred ChhhCC-------CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccc
Confidence 853111 0111223455688999999775 345568999888766554420 0 0000
Q ss_pred cCCCCh-HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC--CcceE--EeEecCCccCCcccC
Q 012095 332 TSGASS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP--QGAFY--LFIDFSTYYGSEAEG 406 (471)
Q Consensus 332 ~~~~~~-~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p--~~g~~--~~~~~~~~~~~~~~~ 406 (471)
+.+.+. .....+..++.. ...+.+.+..+..-.+.+++.+.|.+ ++++..+ .+-++ +.++++... ...
T Consensus 740 ~~~~g~a~~~l~a~~yi~~--lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~--~~~- 812 (939)
T TIGR00461 740 AAPYGSASILPISWMYIKM--MGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK--AKT- 812 (939)
T ss_pred ccccCcHHHHHHHHHHHHH--HCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh--hhc-
Confidence 111111 111222333332 13566778788778889999999987 3444332 22222 234554210 001
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC--cEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGDDT--CIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~--~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
..+..+++++|++. |+...- ..|-..+ .||.+-..+.++|+++++.+.++.+++.
T Consensus 813 ---g~~~~dIakrL~d~-G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 813 ---GIEAIDVAKRLQDY-GFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred ---CCCHHHHHHHHHhC-Ceeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 12678999999986 876332 2243344 3555555588999999999987766543
No 351
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.61 E-value=7.5e-16 Score=147.82 Aligned_cols=249 Identities=20% Similarity=0.223 Sum_probs=160.5
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF 188 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~ 188 (471)
+.+++.+++.++. .+...|+.+....+|++.+++.+ | .+..+++.+++.+..++++++++|++.|++.+++
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~i~~l~----g----~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~a 77 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEERIAELF----G----KEAALFVPSGTMANQLALRAHLRPGESVICADTA 77 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHHHHHHH----T----SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTE
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHHHHHHc----C----CCEEEEeCCCChHHHHHHHHHHhcCCceeccccc
Confidence 5677888885443 34447988877788888888876 3 3466788999999999999999999999999997
Q ss_pred CCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCC-cccCCCHHHHHHHHHHHH
Q 012095 189 WVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNP-TGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 189 y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NP-tG~~~~~~~l~~i~~l~~ 258 (471)
|.... ......|++++.++... +..+|+++|++.+.. ++++|+|.+|+|- .|.++|.+++++|.++|+
T Consensus 78 Hi~~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~ 155 (290)
T PF01212_consen 78 HIHFDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAR 155 (290)
T ss_dssp HHHHSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHH
T ss_pred eeeeeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHH
Confidence 65322 33467999999998653 256999999999854 5789999999985 489999999999999999
Q ss_pred hCCCeEEEEccCCC--ccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCC
Q 012095 259 KHPRLLVLSDEIYE--HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGAS 336 (471)
Q Consensus 259 ~~~~~~ii~De~y~--~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~ 336 (471)
+| ++.++.|-+=- ...+. ..++..+.. .-.++.-|++|.+++++ -+.+++++++++...+.+........
T Consensus 156 ~~-gl~lhmDGARl~~a~~~~---~~~~~e~~~--~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~~k~~gg~~~ 227 (290)
T PF01212_consen 156 EH-GLPLHMDGARLANAAAAL---GVSLAEIAA--GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQRKRLGGGMR 227 (290)
T ss_dssp HH-T-EEEEEETTHHHHHCHH---HHHHHHHHT--TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHHHHHHTHHHH
T ss_pred hC-ceEEEEehhhHHHhhhcc---cccHHHHhh--hCCEEEEEEEccccccc--ceEEEechHHHHHHHHHHHHhccCee
Confidence 99 99999997721 11110 112222221 22266778999988755 25667899987766554443321111
Q ss_pred hHHHHHH-----HHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 337 SISQKAG-----VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 337 ~~~q~aa-----~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
.....++ ...+.. .+.|. ....+..++.+.+.+.|+.+++
T Consensus 228 ~~G~~~a~~~~~~~~l~~---l~~~~-~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 228 QAGVLAAAELYQFAALRA---LELWL-ERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp HTTHHHHHHHHHHHHHCH---EECSH-HHHHCHHHHHHCHHHCHHEECE
T ss_pred ecceeeeechhhHHHHHH---HHhhH-HHHHHHHHHHHHHHHHHHHCCC
Confidence 0001111 012211 12233 3334455567778888888733
No 352
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=5.4e-13 Score=127.77 Aligned_cols=351 Identities=13% Similarity=0.084 Sum_probs=218.0
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..+... ++. .|++.+++.+...+..+...+. -+.+ .-.+++.+.+..+-. .++.|.+.+++++|..
T Consensus 54 ~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~-~t~e-av~l~~~l~~~~~~~-~~~rvff~nsGTeAne 130 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGY-FTLE-AVELEEVLSAVLGKG-SAERVFFCNSGTEANE 130 (433)
T ss_pred CcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCcc-ccHH-HHHHHHHHHhcccCC-CccEEEEecCCcHHHH
Confidence 57789999888733 222 5888888888776532211111 1122 222334443333322 6789999999999999
Q ss_pred HHHHHhcC------CCC--eEEEcCCCCCChHH-HHHHcCCEEEEecCCC---C---CCCcCCHHHHHhhhccCC---cE
Q 012095 170 QAVLAVCS------PGD--EVIIPAPFWVSYPE-MARIADATPVILPTRI---S---ENFLLDPKVLESKLTEKS---RL 231 (471)
Q Consensus 170 ~~~~~l~~------~gd--~Vlv~~p~y~~~~~-~~~~~G~~~~~v~~~~---~---~~~~ld~e~l~~~l~~~~---~~ 231 (471)
.+++...+ +-+ .|+....+|++-.. .+...+......|.++ + -.+ -|..++++.++.+. .+
T Consensus 131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y-nd~t~l~k~~~~h~~~IaA 209 (433)
T KOG1401|consen 131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY-NDSTALEKLFESHKGEIAA 209 (433)
T ss_pred HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc-CCHHHHHHHHHhCCCceEE
Confidence 88887532 112 38888888876543 3333343333443322 1 011 17889999887544 45
Q ss_pred EEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC-ccccccCCCCCCceEEEecCCcccCccch
Q 012095 232 LILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 232 i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
+++.--+--.| ...+++.+..|..+|+++ |+++|.||+..+|...+.. ...+...-+ -+.++.|.++ .|+
T Consensus 210 VIvEPiqGaGG~~p~~peFl~~L~k~C~~~-~vl~I~DEV~tG~gR~g~~~a~e~~~~~P------DI~t~aK~L~-gGl 281 (433)
T KOG1401|consen 210 VIVEPIQGAGGIIPADPEFLIGLRKECDDN-GVLLIFDEVQTGLGRLGYGWAQEYFGVTP------DITTVAKPLG-GGL 281 (433)
T ss_pred EEEecccCCCCcccCCHHHHHHHHHHHhhc-CceEEeehhhhCccccchHHHHHHhCcCC------cceeehhhcc-CCc
Confidence 55543354456 567889999999999999 9999999999986543321 112222222 2667889998 999
Q ss_pred hheeeEcCHHHHHHHHHHH---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 310 RLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~~~---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
.+|..++++++.+.+.--. ...+++.++++..++...|+.-. ..+++.++.+.-+..|+.+.+.+.+.+-...-.-
T Consensus 282 PigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~-~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~ 360 (433)
T KOG1401|consen 282 PIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELK-DPETLKNVSKIGKELRKLLDEYLKKTPNSICGGV 360 (433)
T ss_pred eeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhccCCCceeeee
Confidence 9999999999999886432 25677889999999999988643 3788899888888899999999887532211112
Q ss_pred CcceEEeEecCCccC-C-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYG-S-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
..++++.+.+..... . ..++..+ .-...+...+++ .||.++|-. -++..+++|.+++.++.+.+++.+
T Consensus 361 grgl~ig~~~~~p~~~~~d~~~~~~-ll~~~~~~~~~~-~gv~i~P~~--------~l~~~~~~E~i~~~l~i~~~~l~~ 430 (433)
T KOG1401|consen 361 GRGLVIGFEFEGPVYKFADAAREQG-LLILTLGKGLLE-EGVRIAPIY--------LLTVEHTPEVIQRLLTILEKVLSA 430 (433)
T ss_pred eeEEEEEEEEeechhhhhhhhhhhh-HHHHHHhccccc-ceEEEeccc--------cccccCcHHHHHHHHHHHHHHHHH
Confidence 334444333322111 0 0000000 001112222333 367777721 144445789999999999999887
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
+.
T Consensus 431 ~~ 432 (433)
T KOG1401|consen 431 LN 432 (433)
T ss_pred hc
Confidence 53
No 353
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.58 E-value=8.8e-13 Score=130.99 Aligned_cols=313 Identities=12% Similarity=0.060 Sum_probs=201.2
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCC
Q 012095 113 IAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVS 191 (471)
Q Consensus 113 v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~ 191 (471)
..+++.+.+-. ..+++| -..++.+.+.+.+.+.++.+-+.+-++++.|++.+++.++..++ ++||.|++.. .|..
T Consensus 19 ~~~~~~~~~~~-~~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~ 94 (374)
T TIGR01365 19 SIEELKNAPLG-RSHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK 94 (374)
T ss_pred hHHHHhhhhcc-cCcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH
Confidence 45555543322 233433 34677777778888888853222235668889999999999998 5899888865 5544
Q ss_pred h-H-HHHHHcCC-EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 192 Y-P-EMARIADA-TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 192 ~-~-~~~~~~G~-~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
- . ++++..|+ ++..+.... +-.+++++++. + +.+++++---.||+..+ +++++.. .+ +.++|+|
T Consensus 95 r~~~eia~~~g~~~v~~l~~~~--g~~~~~~~ve~----~-~~v~~vhnETSTGv~np---v~~i~~~--~~-~~lliVD 161 (374)
T TIGR01365 95 GWVTDVTKQLKLPDVRVLEAEY--GKLPDLKKVDF----K-NDVVFTWNGTTSGVRVP---NGDFIPA--DR-EGLTICD 161 (374)
T ss_pred HHHHHHHHhcCCCCcEEEcCCC--CCCCCHHHcCC----C-CCEEEecCCCchheecc---ccccccc--cC-CCcEEEE
Confidence 3 3 77888999 477776543 33579998873 1 22556666668999999 4444422 15 7899999
Q ss_pred cCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH--------------------
Q 012095 269 EIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------------- 328 (471)
Q Consensus 269 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~-------------------- 328 (471)
.+-+.. + ... .++ +-.+++.|--|.+++|+ -+++++.+++.+++.....
T Consensus 162 avSs~g---~-~~l---~~d---~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~ 230 (374)
T TIGR01365 162 ATSAAF---A-QDL---DYH---KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKK 230 (374)
T ss_pred ccchhc---C-CCC---Chh---HCcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhh
Confidence 887642 1 111 111 24478888999998655 3677888888877655210
Q ss_pred ---hcccCCCChHHHHHHHHHHhccCCCh-HHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeCC----CcceEEeEecCCc
Q 012095 329 ---SQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERRDFLVKSFGELEG-VKMSEP----QGAFYLFIDFSTY 399 (471)
Q Consensus 329 ---~~~~~~~~~~~q~aa~~~L~~~~~~~-~~~~~~~~~~~~~r~~l~~~L~~~~g-~~~~~p----~~g~~~~~~~~~~ 399 (471)
..+.+.++....+++..+|..- .+ ..++.+.++++++++.+++.++++ | +.+... .+...+.+.++..
T Consensus 231 ~~~~~t~~TP~v~~l~a~~~~l~~i--~~egGle~~~~Rh~~~a~~l~~~l~~l-g~l~~~~~~~~~rS~tvt~v~~~~~ 307 (374)
T TIGR01365 231 IFEGSTINTPSMLCVEDWLDALKWA--ESIGGLKPLIARADDNLAVLEAFVAKN-NWIHFLAETPEIRSNTSVCLKVVDP 307 (374)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCChhhcCCCeEEEEeCCc
Confidence 1223334444455555555420 02 248899999999999999999998 6 665542 2333344555432
Q ss_pred -cCCcccCCCCCCC-----HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 400 -YGSEAEGFGKIEN-----SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 400 -~~~~~~~~~~~~~-----~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
+... ..+ ..+|.+.|.++ ||.+.+|..--.+..|||.... +.++++.++..|.=+.+
T Consensus 308 ~~~~~------~~~~~~~~~~~~~~~l~~~-gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 308 AIDAL------DEDAQADFAKELISTLEKE-GVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred ccccc------ccchhhHHHHHHHHHHHHC-CEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 1000 002 46777777665 9999988754445789998765 88999999999875544
No 354
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.57 E-value=1.1e-12 Score=137.96 Aligned_cols=149 Identities=13% Similarity=0.172 Sum_probs=112.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCc----CC-----HHHHHhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL----LD-----PKVLESK 224 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~----ld-----~e~l~~~ 224 (471)
.....+++||+|.++..++.+++.+||.||++..+|-+..+.+.+.|+++++++... +.|+ ++ .+.++++
T Consensus 210 Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~ 288 (714)
T PRK15400 210 ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NAYGILGGIPQSEFQHATIAKR 288 (714)
T ss_pred CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cccCCccCCCccccCHHHHHHH
Confidence 446789999999999999999999999999999999999999999999999997654 3332 34 8999998
Q ss_pred hccC-----CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc-ccCCCCc-cccccC-CCCCCceEE
Q 012095 225 LTEK-----SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPATH-TSFASL-PGMWERTLT 296 (471)
Q Consensus 225 l~~~-----~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~-~~~~~~~-~~~~~~-~~~~~~~i~ 296 (471)
+.+. ++.++|.+|+. -|.+++ ++.|.++|+.+ + |++||||+.. .|.+.-. .+.... ....+.+++
T Consensus 289 i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~-~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~v 361 (714)
T PRK15400 289 VKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVK-S--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYE 361 (714)
T ss_pred HHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCC-C--EEEEccchhhhccCcccCCcChhhcCCCCCCceEE
Confidence 8542 33788889965 899999 88888999877 6 6899999853 3433211 111111 111256799
Q ss_pred EecCCcccCccchhhe
Q 012095 297 VNGFSKAFAMTGWRLG 312 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G 312 (471)
+.|..|.+ +|+.-+
T Consensus 362 tQStHKtL--~alTQa 375 (714)
T PRK15400 362 TQSTHKLL--AAFSQA 375 (714)
T ss_pred EEchhhcc--cchhHH
Confidence 99999997 455544
No 355
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.57 E-value=5.7e-12 Score=130.49 Aligned_cols=328 Identities=13% Similarity=0.119 Sum_probs=202.8
Q ss_pred HHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCC-C---------C-CCCcEEEeCChHHHHHHHHHHh----cC----
Q 012095 117 GINAIREGFTRYTPNAGTLELRSAICHKLKEENGL-S---------Y-TPDQILVSNGAKQSILQAVLAV----CS---- 177 (471)
Q Consensus 117 ~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~-~---------~-~~~~i~it~G~~~al~~~~~~l----~~---- 177 (471)
+..++......|...+...++.+.+.+++.+..+. + . +...-++|+|++++...++.+. +.
T Consensus 110 l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~ 189 (522)
T TIGR03799 110 LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD 189 (522)
T ss_pred HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc
Confidence 44455554555555667789999999999887641 1 0 1123577889998887665553 11
Q ss_pred ------------------CCCeEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhc----cCCcEE
Q 012095 178 ------------------PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLT----EKSRLL 232 (471)
Q Consensus 178 ------------------~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i 232 (471)
++..|++++-.|.+....++..|. +++.||++. ++.+|+++|+++++ ++++.+
T Consensus 190 ~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~ 267 (522)
T TIGR03799 190 FKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPL 267 (522)
T ss_pred ccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcE
Confidence 134688899999999999999998 789999864 46799999999885 355555
Q ss_pred EEc--CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc-CCCCCCceEEEecCCcccCccch
Q 012095 233 ILC--SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 233 ~i~--~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
.|+ ..++.||.+-| +++|+++|+++ ++|+++|.+|+....-.. .+.. +.+...-..+..+..|.++ ...
T Consensus 268 ~vvataGtt~tGaiDp---l~eIa~i~~~~-g~~lHVDaA~gg~~~~~~---~~r~~l~gle~aDSit~d~HK~l~-~P~ 339 (522)
T TIGR03799 268 AIVGVAGTTETGNIDP---LDEMADIAQEL-GCHFHVDAAWGGATLLSN---TYRHLLKGIERADSVTIDAHKQLY-VPM 339 (522)
T ss_pred EEEEEecCcCCCCcCC---HHHHHHHHHHc-CCeEEEEchhhhHHHhCH---HHHHHhcCchhCCEEEEChhhcCC-cCc
Confidence 443 55779999999 99999999999 999999999985432110 1101 1111123467788999764 335
Q ss_pred hheeeEcC-HHHHHHHHHHHhc-----------ccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 310 RLGYIAGP-KHFVAACNKIQSQ-----------FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 310 R~G~v~~~-~~~i~~l~~~~~~-----------~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
-+|+++.. +++.+.+.....+ +++ +.-+.....+..+|+. .....++++.++..+.++++.+.|+
T Consensus 340 g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~--lG~~G~~~ii~~~~~la~~l~~~L~ 417 (522)
T TIGR03799 340 GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHI--IGRKGYELLIDQSIEKAKYFADLIQ 417 (522)
T ss_pred ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 68888775 4555544321000 011 1111111223333432 1246688899999999999999999
Q ss_pred CCCCCeeeCC-CcceEEeEec-CCccCCcc-----cCCCCC-----CCHHHHHHHHHHcCCEEEECCC----CC-CCC-C
Q 012095 377 ELEGVKMSEP-QGAFYLFIDF-STYYGSEA-----EGFGKI-----ENSESLCRYLLDKAQVALVPGD----AF-GDD-T 438 (471)
Q Consensus 377 ~~~g~~~~~p-~~g~~~~~~~-~~~~~~~~-----~~~~~~-----~~~~~l~~~Ll~~~gV~v~pg~----~f-~~~-~ 438 (471)
+.+++++..+ .-+. +.+++ |....... +..... .-...+.+++.+.+.+++.+-. .+ +.. -
T Consensus 418 ~~~~~el~~~p~l~i-v~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 418 QQPDFELVTEPELCL-LTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred hCCCeEEecCCCccE-EEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 9989987654 4454 34443 33211000 000000 0113455565666445555322 11 111 3
Q ss_pred cEEEEeec---CHHHHHHHHHH
Q 012095 439 CIRISYAA---SLTTLQAAVER 457 (471)
Q Consensus 439 ~iRis~~~---~~e~i~~~~~~ 457 (471)
.+|++++. ++++++..++.
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHHH
Confidence 69999986 67888887654
No 356
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.57 E-value=4e-12 Score=126.16 Aligned_cols=354 Identities=13% Similarity=0.068 Sum_probs=207.3
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.|+.+||-.+|... .+- .+++.+|+.+++.+-. .|.+. .+.+ -..+++.+.+..+- -+-++|++|+|++++
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~-~~~~~~~t~~P--a~~LA~~L~~~aP~-~~l~~vFf~~sGSeA 117 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLP-HVMFGGFTHEP--AIELAEKLAELAPE-GGLDHVFFTDSGSEA 117 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCC-chhhcccCCch--HHHHHHHHHHhCCC-CCccEEEEeCCchHH
Confidence 57788887777633 333 6889999999987622 22121 2222 44555555544331 124799999999999
Q ss_pred HHHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHcCC--------------EEEEecCCCC------CCCc----
Q 012095 168 ILQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIADA--------------TPVILPTRIS------ENFL---- 215 (471)
Q Consensus 168 l~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~~------~~~~---- 215 (471)
++.+++... +|. ..++.-..+|++-.-.+-..|. .+..+|.... +.+.
T Consensus 118 vEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~ 197 (449)
T COG0161 118 VETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFA 197 (449)
T ss_pred HHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHH
Confidence 999988753 243 3477777888753322211111 1222222210 1111
Q ss_pred CCHHHHHhhhcc---CCcEEEEcCC--CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 216 LDPKVLESKLTE---KSRLLILCSP--SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 216 ld~e~l~~~l~~---~~~~i~i~~p--~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
-..++|++.+.. .+-+-+|..| +--+|. ++++..|+++.++|++| |+++|.||+-..|--.|. .|..-
T Consensus 198 ~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky-~ILlI~DEV~tGFGRTG~---~FA~e-- 271 (449)
T COG0161 198 EAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY-GILLIADEVATGFGRTGK---MFACE-- 271 (449)
T ss_pred HHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc-CcEEEeecceeCCCcCch---hhhhh--
Confidence 125667776643 3445556666 444674 66777899999999999 999999999888643332 22211
Q ss_pred CCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH-----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~-----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
.++..--+-+++|.+.-.=+.+|.+++.+++.+.+..- ....+++.++++.+++.+.|+.-. .+.++++..+.-
T Consensus 272 ~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e-~e~l~~~~~~~~ 350 (449)
T COG0161 272 HAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILE-EEDLLERVAEIG 350 (449)
T ss_pred hcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 01111124457899863447788888899998887653 344677899999999988887521 134444444333
Q ss_pred HHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012095 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 444 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~ 444 (471)
....+.|.+.+.+.|.+-=+. .-|+..-+.+-...+. ...+ ...-...+...++++ |++++|.. +.+=++.
T Consensus 351 ~~l~~~L~~~l~~~p~VgdVR-~~Gli~~iElv~d~~t-~~~f-~~~~~~~~~~~~~e~-Gl~iRp~g-----~~i~~~P 421 (449)
T COG0161 351 AYLQAGLQAALADHPLVGDVR-GLGLIGAIELVADKAT-KTPF-EARVGARVRAAALER-GLLIRPLG-----DVIYLMP 421 (449)
T ss_pred HHHHHHHHHhcccCCcEEEee-ccceEEEEEEeccccc-ccch-hhhHHHHHHHHHHHC-CeEEeecC-----CEEEEcC
Confidence 333333333333333332222 3355455555432110 0000 001245666766665 99999963 2333333
Q ss_pred e--cCHHHHHHHHHHHHHHHHhhC
Q 012095 445 A--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 445 ~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
. .++++|++.++++.+++++..
T Consensus 422 Pliit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 422 PLIITREEIDELVDALREALDETL 445 (449)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHH
Confidence 3 389999999999999998654
No 357
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=1.4e-12 Score=132.62 Aligned_cols=277 Identities=15% Similarity=0.154 Sum_probs=196.1
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C---CC
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-----P---GD 180 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~-----~---gd 180 (471)
+++...+.+...+..+...-...++..++.+.+..++.+.++.+ ....=.+|+|+|+++.+.+++..+ . +.
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~ 152 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESG 152 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhccc
Confidence 46677788888877655433334478999999999999999965 444668999999999877776421 1 11
Q ss_pred ------eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcE--EEEcCCCCCcccCCCHHHHHH
Q 012095 181 ------EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL--LILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 181 ------~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~--i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+|+++.-.|.++...++.+|.+...+++.+. ++.+|++++++++.+.+.. |+-+.++-+||.+=+ +++
T Consensus 153 ~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i~~ 228 (460)
T COG0076 153 KPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---IEE 228 (460)
T ss_pred ccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---HHH
Confidence 6999999999999999999999999999875 6889999999999887665 777888899999888 999
Q ss_pred HHHHHHhCCCeEEEEccCCCcccc--CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH-HHHHHHHHHh
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQS 329 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~i~~l~~~~~ 329 (471)
|.++|+++ ++++.+|.||+.+.. ......-...++ .-.-+.-++.|.. +.-..+||++..++ -......+..
T Consensus 229 ia~ia~~~-~i~lHVDAA~GG~~~pf~~~~~~~~f~l~---~vdSIt~d~HK~g-~aP~~~G~il~rd~e~l~~~~~~~~ 303 (460)
T COG0076 229 LADIAEEY-GIWLHVDAAFGGFLLPFLEPDGRWDFGLE---GVDSITVDGHKYG-LAPIGCGVVLFRDEEALRRILIFAD 303 (460)
T ss_pred HHHHHHHc-CCcEEEEccccceeecccCccchhhcCCC---CceEEEECccccc-CCCCCceEEEEECHHHhhhhhhccc
Confidence 99999999 999999999998653 221111011221 2234556799986 57788999998654 3333332221
Q ss_pred cccC-----------CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecC
Q 012095 330 QFTS-----------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (471)
Q Consensus 330 ~~~~-----------~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~ 397 (471)
++.. +-+.....++.+.+.. ...+.+.++.++..+.++++.+.|++.+.+++.. |..+. +.++.+
T Consensus 304 ~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~--lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~-V~fr~~ 380 (460)
T COG0076 304 YYLPGGGIPNFTILGSRPGRQALALYANLRR--LGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPI-VAFRLK 380 (460)
T ss_pred ccCCCCCcCceeEeeccchHHHHHHHHHHHH--hCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccce-EEEEcC
Confidence 1111 1112112222223332 1357788888888999999999999985588765 54444 666775
Q ss_pred C
Q 012095 398 T 398 (471)
Q Consensus 398 ~ 398 (471)
+
T Consensus 381 ~ 381 (460)
T COG0076 381 D 381 (460)
T ss_pred C
Confidence 4
No 358
>PLN02263 serine decarboxylase
Probab=99.56 E-value=2.2e-11 Score=122.98 Aligned_cols=293 Identities=11% Similarity=0.042 Sum_probs=197.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
+..++.+.+.+|+.+.+|.+-+...=++|+|+|+++..++.+.-+ +...|++++-+|.+...+++.+|.+++.||++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 678999999999999999642222358899999999887776533 33478889999999999999999999999986
Q ss_pred CCCCcCCHHHHHhhhccCC---cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe-----EEEEccCCCccccCCCCcc
Q 012095 211 SENFLLDPKVLESKLTEKS---RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL-----LVLSDEIYEHIIYAPATHT 282 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~~~---~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~-----~ii~De~y~~~~~~~~~~~ 282 (471)
.++.+|+++|++++.+++ -+|+.+.++-++|.+=+ +++|.++|+++ ++ |+.+|.+|+++...-....
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~-g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEEC-GFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHc-CCccCCeeEEEeccchhhHhhhcccc
Confidence 457899999999986543 34445778889999999 99999999998 86 9999999987653100011
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc-----cCCCChH--HHHHHHHHHhccCCChH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF-----TSGASSI--SQKAGVAALGLGYAGGE 355 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~-----~~~~~~~--~q~aa~~~L~~~~~~~~ 355 (471)
..+.+. ..-.=+.-+..|.++ .....|.++..++.++.+..-..+. +...+.. ....+...|.. ...+
T Consensus 284 ~~~df~--~~vDSIsvD~HK~l~-~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~--~G~~ 358 (470)
T PLN02263 284 PKVTFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR--KGYR 358 (470)
T ss_pred cccCCC--cCccEEEECCccccC-CCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHH--hCHH
Confidence 111111 111223456789986 6678899888876554442211111 1111211 12223333432 1356
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 356 VVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
.+.+..++.-++.+++.+.|++. |+. +..|.....+| ..|. ... ..+ |-.+..
T Consensus 359 G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f-~~p~--------------~~~-----~~~-gW~L~~---- 412 (470)
T PLN02263 359 GFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVF-ERPK--------------DEE-----FVR-RWQLAC---- 412 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEE-ecCc--------------hHH-----hhc-ceEEcc----
Confidence 78888888888999999999988 654 55666665443 3331 111 122 333333
Q ss_pred CCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 435 GDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 435 ~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
.++.+++.+.. +.+.++++++.|++..+
T Consensus 413 -~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 413 -QGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred -CCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 12468888876 77999999999988765
No 359
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.54 E-value=7.8e-12 Score=134.93 Aligned_cols=346 Identities=14% Similarity=0.117 Sum_probs=204.8
Q ss_pred CeEEcCCCC--CCCC--ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGE--PDFD--TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~--~~~~--~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
+.+|+..|. ..++ -.+++.+|+.+++.+-. ++....-..+-...+++.+.+..+.+ ..++++++++++++++.+
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~-hv~~~~~~hepa~~LAe~L~~~~~~~-~l~rVffs~sGSeAvE~A 443 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG-HVMFPENVHEPALRAAELLLGGPGKG-WASRVFFSDNGSTAIEVA 443 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC-ccccCccCCHHHHHHHHHHHhccCCC-CCCEEEECCchHHHHHHH
Confidence 678887775 3344 27889999999887622 22222223566677777776522200 136899999999999988
Q ss_pred HHHhcC---------------------CCCeEEEcCCCCCChHHHHHHcCCE---------E------EEecCCC----C
Q 012095 172 VLAVCS---------------------PGDEVIIPAPFWVSYPEMARIADAT---------P------VILPTRI----S 211 (471)
Q Consensus 172 ~~~l~~---------------------~gd~Vlv~~p~y~~~~~~~~~~G~~---------~------~~v~~~~----~ 211 (471)
++...+ ....|+....+|++-...+-..+.. . ..++... .
T Consensus 444 lKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~ 523 (817)
T PLN02974 444 LKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRN 523 (817)
T ss_pred HHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccc
Confidence 876521 1235888888888744333222210 0 0111000 0
Q ss_pred --------CC-----------Cc-----CC------------HHHHHhhhcc--------CCcEEEEcCC--CCCcccC-
Q 012095 212 --------EN-----------FL-----LD------------PKVLESKLTE--------KSRLLILCSP--SNPTGSV- 244 (471)
Q Consensus 212 --------~~-----------~~-----ld------------~e~l~~~l~~--------~~~~i~i~~p--~NPtG~~- 244 (471)
.+ |. .+ .+.+++.+.. +..+|++ .| +.-.|..
T Consensus 524 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~-EPviqGaGGmi~ 602 (817)
T PLN02974 524 GRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALII-EPVLHGAGGMLL 602 (817)
T ss_pred ccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEE-eccccCCCCccc
Confidence 00 00 00 2446665531 3344444 44 5666764
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccc-hhheeeEcCHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVA 322 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~ 322 (471)
.+++.+++|.++|++| |+++|.||++.+|.-.|... .....+.+ | +-+++|.++ .| +.+|.+++++++.+
T Consensus 603 ~~~~yl~~lr~lc~~~-gilLI~DEV~TGfGRtG~~fa~e~~gv~P--D----Ii~~gKgLt-gG~~Plaa~l~~~~I~~ 674 (817)
T PLN02974 603 IDPLFQRALVQVCRSR-KIPVIFDEVFTGLWRLGVESAWELLGCKP--D----IACYAKLLT-GGLVPLAATLATEEVFE 674 (817)
T ss_pred CCHHHHHHHHHHHHHh-CCEEEEeecccCCCcccchhhHHhcCCCC--C----EEeeccccc-CCCCccEEEEEcHHHHH
Confidence 5788999999999999 99999999999874433211 11111211 1 445889998 88 69999999999999
Q ss_pred HHHH------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH----HHhcCCCCCeeeCCCcceEE
Q 012095 323 ACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV----KSFGELEGVKMSEPQGAFYL 392 (471)
Q Consensus 323 ~l~~------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~----~~L~~~~g~~~~~p~~g~~~ 392 (471)
.+.. +....+++.++++.+++.+.|+.-.. ++....+.+.-++..+++. +.|.+.|.+.-+... |+++
T Consensus 675 ~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~-~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~~ 752 (817)
T PLN02974 675 AFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKD-PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTVL 752 (817)
T ss_pred hhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeEE
Confidence 8852 12345778999999999888875211 2222333333333333333 334445444333333 4445
Q ss_pred eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
-+.+.+..+ ..++ ...-...+.+.++.+.||++.|.. +.+|+.... +++++++++++|.+.|
T Consensus 753 ~iel~~~~~--~~~~-~~~~a~~v~~~~~~~~Gl~~r~~G-----nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 753 ALELDAEGS--GSGY-SSLYARSVVRRLRREDGIYARPLG-----NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEEecCCc--cccc-chHHHHHHHHHHHHhCCEEEEecC-----CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 556643110 0111 001235677777724599998842 567875544 8999999999998765
No 360
>PLN02452 phosphoserine transaminase
Probab=99.54 E-value=6.6e-12 Score=124.70 Aligned_cols=323 Identities=14% Similarity=0.161 Sum_probs=210.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHc----C-----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIRE----G-----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~----~-----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
++.|+.|-. ..|+.|++++.+.+.+ + ..+.+ .-..++.+.+.+.+.+.++++-+.+-++++.|++.+
T Consensus 8 ~~~f~pGP~--~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs--~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~ 83 (365)
T PLN02452 8 VFNFSAGPA--TLPANVLAKAQAELYNWEGSGMSVMEMSHRG--KEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQ 83 (365)
T ss_pred eEeeeCCCC--CCCHHHHHHHHHHHhcccccCccccccCCCc--hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHH
Confidence 566655543 3478888888876532 1 12222 223567777777888888853222345566789999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCC--cCCHHHHHhhhccCCcEEEEcCCCCCccc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSY--PEMARIADATPVILPTRISENF--LLDPKVLESKLTEKSRLLILCSPSNPTGS 243 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~--~ld~e~l~~~l~~~~~~i~i~~p~NPtG~ 243 (471)
+..++..++.+||.+++..-...+- .+.++.+|...+.... ++.+| .+++++++. .++.+.+.+++-.-.||+
T Consensus 84 ~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hnETstGv 160 (365)
T PLN02452 84 FAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICANETIHGV 160 (365)
T ss_pred HHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCCCCCCcE
Confidence 9999999999999887765544332 3567778864443321 12222 356666532 345677777776678999
Q ss_pred C-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHH
Q 012095 244 V-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (471)
Q Consensus 244 ~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~ 322 (471)
. .+ ++++. ++++|+|.+.... .....+.. ++ +.+.|.-|.+|.+| +|++++++++++
T Consensus 161 ~~~~---~~~i~-------~~~lvVDa~Ss~g----~~pidv~~----~~--v~~~saqK~lGP~G--l~~v~vr~~~l~ 218 (365)
T PLN02452 161 EFKD---YPDVG-------NVPLVADMSSNFL----SKPVDVSK----YG--VIYAGAQKNVGPSG--VTIVIIRKDLIG 218 (365)
T ss_pred ecCc---ccccC-------CCeEEEECCcccc----CcccCHHH----cC--EEEEecccccCCCC--eEEEEEcHHHHh
Confidence 6 44 43332 4788999887652 22222221 22 34468999999888 899999999887
Q ss_pred HHHHH------------HhcccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCee--eCC-
Q 012095 323 ACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKM--SEP- 386 (471)
Q Consensus 323 ~l~~~------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~--~~p- 386 (471)
++... ...+..+|+....+++..+|+.- .++ .++.+.++++++.+++++.|++.+|+.. ..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l--~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~ 296 (365)
T PLN02452 219 NARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDL--LAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKS 296 (365)
T ss_pred hcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChH
Confidence 64321 11122467788888888888751 122 4889999999999999999998777611 111
Q ss_pred -CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 387 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
.+.+.+.+.+++. ....+|.+.+.+ .|+...+|..- -+.+|+|+-. +.++++.+++-++++-+
T Consensus 297 ~rs~~~vsF~~~~~-----------~~~~~f~~~~~~-~g~~~~~G~r~--~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 297 VRSLMNVPFTLGGS-----------ELEAEFVKEAAK-AGMVQLKGHRS--VGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred HhCCeEEEEEcCCc-----------hhHHHHHHHHHH-CCCcccCCccc--cCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 2455666777653 256778887655 59999998753 2239999876 88999999888888755
Q ss_pred h
Q 012095 464 T 464 (471)
Q Consensus 464 ~ 464 (471)
+
T Consensus 363 ~ 363 (365)
T PLN02452 363 K 363 (365)
T ss_pred h
Confidence 4
No 361
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=1e-11 Score=136.32 Aligned_cols=325 Identities=17% Similarity=0.170 Sum_probs=205.9
Q ss_pred HHHHHHHHHHhcCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 82 AITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 82 ~~~~~~~~~~~~g~~-~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
++....+++.++++. ...++.|.-+.-.|+.+.+.+.+.- ...+.|+|. +|..+..-.....+.+..|+ +.
T Consensus 62 e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~-~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~--~~ 138 (954)
T PRK05367 62 EALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENP-AWYTAYTPYQPEISQGRLEALLNFQTMVADLTGL--EI 138 (954)
T ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCc-chhhccCCCChHHHHHHHHHHHHHHHHHHHHHCC--Ch
Confidence 333444444444432 1335666655555766655554421 124667764 56655555555556666674 67
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCC--CCeEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 156 DQILVSNGAKQSILQAVLAV-CSP--GDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l-~~~--gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.|+.+..+++++.+.+++++ ..+ +|+|++++-.|+.+... ++..|.+++.++.+. + ++ .++
T Consensus 139 anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d--~~--------~~~ 206 (954)
T PRK05367 139 ANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A--LD--------HDD 206 (954)
T ss_pred hhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C--CC--------ccc
Confidence 89999999999999888776 344 48999999999988764 456899999998743 1 11 224
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc-----
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA----- 303 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~----- 303 (471)
+.++++.+| |-+|.+.+ +++|+++|+++ |+++++|-....+.. ...++..+-.|+++|..|.
T Consensus 207 ~~~vlvq~p-~~~G~i~d---~~~i~~~ah~~-Gal~~vda~~~Al~~--------l~~pge~GaDi~vgs~qkfg~P~g 273 (954)
T PRK05367 207 VFGVLLQYP-GTSGEVRD---YTALIAAAHAR-GALVAVAADLLALTL--------LTPPGEMGADIAVGSAQRFGVPMG 273 (954)
T ss_pred EEEEEEecC-CCCeeecc---HHHHHHHHHHc-CCEEEEEehhhhccC--------CCChhhcCCCEEEeeCcccCCCCC
Confidence 445556666 45999998 99999999999 999999864422211 1112334556889988887
Q ss_pred cCccchhheeeEcCHHHHHHHH-HHH-------------------------hcccCCCChH-HHHHHHHH--HhccCCCh
Q 012095 304 FAMTGWRLGYIAGPKHFVAACN-KIQ-------------------------SQFTSGASSI-SQKAGVAA--LGLGYAGG 354 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~-~~~-------------------------~~~~~~~~~~-~q~aa~~~--L~~~~~~~ 354 (471)
||-| -.|++.+.+++.+.+. ++. ...+++..+. +..++.+. +.. ...
T Consensus 274 ~GGP--~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~--~g~ 349 (954)
T PRK05367 274 FGGP--HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVY--HGP 349 (954)
T ss_pred CCCC--CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHH--Hhh
Confidence 4434 4899999888777652 000 0011111111 01111111 111 024
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEE--eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL--FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
..++++.++...+..++.+.|.+. |+++..+ .+|- .++++ .+..++.++|+++ ||.+..-
T Consensus 350 ~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~--~~f~~~~~~~~-------------~~~~~i~~~l~~~-gi~~~~~- 411 (954)
T PRK05367 350 EGLKAIARRVHRLAAILAAGLRAL-GLEVVHD--SFFDTLTVEVG-------------GDAAAVLARALAA-GINLRRV- 411 (954)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhc-CcccCCC--CCCCeEEEeCC-------------CCHHHHHHHHHHC-Cceeccc-
Confidence 567888888889999999999774 8776533 2332 23332 1678899998876 8887321
Q ss_pred CCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 433 AFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 433 ~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.++.+|+|+.. ++++|+.+++.|.
T Consensus 412 ---~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 412 ---DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred ---cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 25679999987 8899999999996
No 362
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.52 E-value=6.5e-12 Score=119.57 Aligned_cols=342 Identities=14% Similarity=0.138 Sum_probs=210.3
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
+.|+.++|+-.|... ++. +|.+.+++.+++..- ...|. ..-..++-+.+.+.+- -+-..++++|+++
T Consensus 47 e~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~-~~pi~~~Ae~L~s~~P------~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 47 EEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYL-NPPIHDLAEALVSKLP------GDLKVVFFVNSGS 119 (442)
T ss_pred CCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeecccc-CCcHHHHHHHHHHhCC------CCceEEEEecCCc
Confidence 367788888888743 333 688999999887542 23453 3334666666666641 1335789999999
Q ss_pred HHHHHHHHHhc-CCC-CeEEEcCCCCCChH-HHHHHcCCEEEEecCCCC--------------CCCcCC---------HH
Q 012095 166 QSILQAVLAVC-SPG-DEVIIPAPFWVSYP-EMARIADATPVILPTRIS--------------ENFLLD---------PK 219 (471)
Q Consensus 166 ~al~~~~~~l~-~~g-d~Vlv~~p~y~~~~-~~~~~~G~~~~~v~~~~~--------------~~~~ld---------~e 219 (471)
+|.+++++... -.| -.++.-..+|.+.. ..+.+-|......+.+.. .-|+=+ .+
T Consensus 120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 99998877642 122 24555555665544 333333443333222110 001101 13
Q ss_pred HHHhhhc---cCCcEEEE-cCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCce
Q 012095 220 VLESKLT---EKSRLLIL-CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERT 294 (471)
Q Consensus 220 ~l~~~l~---~~~~~i~i-~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 294 (471)
++++.+. +.+-+-+| .+.+--.| +.+++..+++..++|+++ |.+.|.||+...|-..| .++.+.. .+-+
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~-Ggl~IaDEVqtGfGRtG----~~wgfe~-h~v~ 273 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR-GGLFIADEVQTGFGRTG----HMWGFES-HGVV 273 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc-CCEEEehhhhhcccccc----ccccccc-cCCC
Confidence 4444442 23334444 44455556 467788999999999999 99999999999874443 4555432 3555
Q ss_pred EEEecCCcccCccchhheeeEcCHHHHHHHHHHH-hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~-~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (471)
--+-|++|.+| .|+.+|.++..+++.+-+.+.. ..++++.++++.+++.+.|+-- .-+++.+.-++.-.+|.+
T Consensus 274 PDIvTmAKgiG-nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vi-----kee~LqE~aa~vG~yl~~ 347 (442)
T KOG1404|consen 274 PDIVTMAKGIG-NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVI-----KEENLQENAAEVGSYLLE 347 (442)
T ss_pred ccHHHHHhhcc-CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHH-----HHHhHHHHHHHHHHHHHH
Confidence 56889999999 9999999999999999988765 6678889999999999888741 123334444445555555
Q ss_pred HhcCC-CCCeeeC--CCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--C
Q 012095 374 SFGEL-EGVKMSE--PQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--S 447 (471)
Q Consensus 374 ~L~~~-~g~~~~~--p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~ 447 (471)
.|.++ .+.+++. -.-|.++-+.+-+.. .+.+.. ......+.+.+.+ .||.+.-|..+|. .+||+... |
T Consensus 348 ~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk---~~~~pp~~~~~~~i~~~cke-~Gvlvg~g~i~G~--vfriaPPlciT 421 (442)
T KOG1404|consen 348 KLAALKDKHPIIGDVRGRGLMLGVELVSDK---SEPKPPATAEGAVIGEQCKE-LGVLVGKGGIHGN--VFRIAPPLCIT 421 (442)
T ss_pred HHHHHhhcCCceeecccceeEEEEEEeccc---CCCCCcchHHHHHHHHHHHH-hCeeeecccccce--EEEecCCeecc
Confidence 55543 1222221 123454545443221 001000 0123455677665 5999988887765 89998764 9
Q ss_pred HHHHHHHHHHH
Q 012095 448 LTTLQAAVERI 458 (471)
Q Consensus 448 ~e~i~~~~~~l 458 (471)
.||++.+++..
T Consensus 422 ~edi~f~~~~~ 432 (442)
T KOG1404|consen 422 KEDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHHH
Confidence 99997766644
No 363
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.51 E-value=1.2e-11 Score=130.22 Aligned_cols=153 Identities=14% Similarity=0.149 Sum_probs=110.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCc----CCH-----HHHHhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL----LDP-----KVLESK 224 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~----ld~-----e~l~~~ 224 (471)
.....+++||+|.++..++.+++.+||.||++..+|-+..+.+.+.|+++++++... +.|+ ++. +.++++
T Consensus 210 Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~~Gi~g~I~~~~~~~e~I~~~ 288 (713)
T PRK15399 210 AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NALGILGGIPRREFTRDSIEEK 288 (713)
T ss_pred CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cccCCcCCCChhhccHHHHHHH
Confidence 446789999999999999999999999999999999999999999999999997543 2333 345 888888
Q ss_pred hcc-----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc-ccCCCCc-cccccC-CCCCCceEE
Q 012095 225 LTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI-IYAPATH-TSFASL-PGMWERTLT 296 (471)
Q Consensus 225 l~~-----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~-~~~~~~~-~~~~~~-~~~~~~~i~ 296 (471)
+.+ ++++++|++|+. -|.+++ +++|.++| . --+|++||||+.. .|.+... .+.... .+.+-.+++
T Consensus 289 i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~--g-~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~ 361 (713)
T PRK15399 289 VAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL--D-VPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFE 361 (713)
T ss_pred HHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh--C-CCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeee
Confidence 853 346888999965 899999 77777777 2 2245699999853 3433111 111111 122234566
Q ss_pred EecCCcccCccchhhe-eeEc
Q 012095 297 VNGFSKAFAMTGWRLG-YIAG 316 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G-~v~~ 316 (471)
+.|..|.+ +|+.-+ ++..
T Consensus 362 tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 362 TQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred eeehhccc--cccchheeeee
Confidence 99999997 455544 4444
No 364
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.50 E-value=1.8e-11 Score=133.83 Aligned_cols=330 Identities=13% Similarity=0.174 Sum_probs=198.9
Q ss_pred HHHHHHHHHHhcCCCe-EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 82 AITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 82 ~~~~~~~~~~~~g~~~-i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
++....+++..+++.. -.++.|.-+.-.|+.+.+++.+...- .+.|+|. +|..+........+.+..| .++
T Consensus 89 e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~-~TaytPYqaEisQG~lqal~~~Qt~ia~LtG--~~~ 165 (993)
T PLN02414 89 QMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGW-YTQYTPYQAEIAQGRLESLLNYQTMITDLTG--LPM 165 (993)
T ss_pred HHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHH-HhhcCCCchHHHHHHHHHHHHHHHHHHHHhC--CCh
Confidence 3334444444443322 22344554445577777777654321 2445443 4544433444444444456 478
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCC--CeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 156 DQILVSNGAKQSILQAVLAV-CSPG--DEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l-~~~g--d~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
+|+.++.|++++...+++++ +.+| |+|++++-.|+.+...+ +..|++++.++.+.. + ...+.
T Consensus 166 anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~ 234 (993)
T PLN02414 166 SNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGD 234 (993)
T ss_pred hhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCc
Confidence 89999999999999887776 3544 78999999999987655 446999999986421 1 11122
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc---C
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF---A 305 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~---g 305 (471)
.-.+++.+|++ +|.+.+ +++|+++|+++ ++++++ .+... ... .+.. ++..+-.|++++..|.. |
T Consensus 235 v~~vlvq~P~~-~G~v~d---v~~I~~~ah~~-GaL~iV-aad~l-al~-----~l~~-pge~GADi~vgsgqKwg~P~G 301 (993)
T PLN02414 235 VCGVLVQYPAT-DGEVLD---YAEFVKNAHAN-GVKVVM-ATDLL-ALT-----MLKP-PGEWGADIVVGSAQRFGVPMG 301 (993)
T ss_pred eEEEEEecCCC-CeEEcC---HHHHHHHHHHc-CCEEEE-EECHH-Hhc-----CCCC-HhhccCcEEEECCCccccCCC
Confidence 33344444443 999998 99999999999 899988 33321 111 1111 22245558889888876 2
Q ss_pred ccchhheeeEcCHHHHHHHH-HHHhc-----------------------ccCCCChHHHHHHHHHHhc---cCCChHHHH
Q 012095 306 MTGWRLGYIAGPKHFVAACN-KIQSQ-----------------------FTSGASSISQKAGVAALGL---GYAGGEVVS 358 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~-~~~~~-----------------------~~~~~~~~~q~aa~~~L~~---~~~~~~~~~ 358 (471)
..|-+.|++++.+++.+.+- ++... -..+.|.-+..+..+.+.. .......++
T Consensus 302 ~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~ 381 (993)
T PLN02414 302 YGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 381 (993)
T ss_pred CCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHH
Confidence 24556899999887766442 11000 0011222122222222211 000134477
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
++.++..++..++.+.|.+. |+++..+ .|| +.++++ +..++.++|.++ ||.+....
T Consensus 382 ~Ia~ri~~la~~l~~~L~~~-G~~~~~~--~~f~~vt~~~~--------------~~~~v~~~L~~~-gI~l~~~~---- 439 (993)
T PLN02414 382 TIAQRVHGLAGVFAAGLKKL-GFQVQSL--PFFDTVKVKCS--------------DADAIADAAAKV-GINLRVVD---- 439 (993)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCccCCC--CCcCeEEEecC--------------CHHHHHHHHHHC-CCeeEEec----
Confidence 77888888999999999775 7776433 333 233333 457888888776 88665422
Q ss_pred CCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 437 DTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 437 ~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
++.+|+|+.. +++||+.+++.|..
T Consensus 440 ~~~lrvs~~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 440 ANTVTVSFDETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CCeEEEEeeccCCHHHHHHHHHHHcc
Confidence 4579999987 88999999999863
No 365
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=1.1e-11 Score=115.28 Aligned_cols=333 Identities=15% Similarity=0.181 Sum_probs=213.2
Q ss_pred cCCCeEEcCCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~---~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+..+||-.+..... -++.++++++++.+.-. -+...-+..+-...++++.+.+|. +.++.++-+.|+..
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLt--lssrafYnd~~~~f~~~vt~lf~~----~kvlpmnTGaEa~E 130 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLT--LSSRAFYNDVLGEFAEYVTKLFGY----DKVLPMNTGAEAVE 130 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhh--hhhHHHhhhhHHHHHHHHHHhcCc----ceeeecccchhHHH
Confidence 5677777766664332 27889999998876411 111122345556666677666653 56777777788888
Q ss_pred HHHHHhc------C--CCC--eEEEcCCCCCChHHHHHHcCCE--------------EEEecCCCCCCCcCCHHHHHhhh
Q 012095 170 QAVLAVC------S--PGD--EVIIPAPFWVSYPEMARIADAT--------------PVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 170 ~~~~~l~------~--~gd--~Vlv~~p~y~~~~~~~~~~G~~--------------~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
.++...- + |.| .|+....+|++-.-.+-.++.+ +..||+ + |.++|+.++
T Consensus 131 ta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y------~-d~eale~~l 203 (427)
T KOG1402|consen 131 TACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY------G-DAEALEVAL 203 (427)
T ss_pred HHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc------C-CHHHHHHHh
Confidence 7776542 1 322 3555555555422111111111 122221 1 899999999
Q ss_pred ccCCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 226 TEKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 226 ~~~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
+++.-+-++..| +--.|+ +.++..+++..++|.+| ++++|.||++.++...|.-. ......-... +++ |.|.
T Consensus 204 ~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky-nvl~I~DEvQTGl~RTGk~l--a~d~env~PD-ivi--lgKa 277 (427)
T KOG1402|consen 204 KSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY-NVLLIADEVQTGLARTGKLL--ACDYENVRPD-IVI--LGKA 277 (427)
T ss_pred cCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-cEEEEehhhhhcccccCcEE--EeehhhcCCC-eEE--Eecc
Confidence 764444455555 767775 55667899999999999 99999999999876554311 1111111111 333 5699
Q ss_pred cCccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC---
Q 012095 304 FAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE--- 379 (471)
Q Consensus 304 ~g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--- 379 (471)
++ .| +.+..++++++++..+..-....+++.|+++.+++.++|+. -.-+.+.++-++.-+.|++.|.+++
T Consensus 278 lS-GG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalev-----i~eekL~era~~lG~~l~~~L~~l~~~~ 351 (427)
T KOG1402|consen 278 LS-GGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEV-----IVEEKLVERAAKLGEILRDQLNKLQKKF 351 (427)
T ss_pred cc-CCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 86 55 56778889999998887766777889999999999999974 2235566667777777888887763
Q ss_pred -CC-eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHH
Q 012095 380 -GV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAV 455 (471)
Q Consensus 380 -g~-~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~ 455 (471)
++ +.+. .-|++.-+.+... ... ..++.++|-.|. +.|++.-|-. .+-||++... +++++++++
T Consensus 352 p~~v~~VR-GrGl~~ai~i~~~---~~~----~~~aw~~cl~lk-~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~ 418 (427)
T KOG1402|consen 352 PHVVKEVR-GRGLLNAIVINPS---KTS----GQDAWDVCLALK-ENGLLAKPTH----GNIIRFAPPLVISEEDLREGI 418 (427)
T ss_pred cchhheee-ccceEEEEEeccc---ccc----chhHHHHHHccc-ccccccCCCC----CCeEEecCCcccCHHHHHHHH
Confidence 32 3333 3356555555421 011 126777887655 4588877744 4589999776 999999999
Q ss_pred HHHHHHHH
Q 012095 456 ERIKKGLL 463 (471)
Q Consensus 456 ~~l~~~l~ 463 (471)
+.|.+.+.
T Consensus 419 e~i~k~i~ 426 (427)
T KOG1402|consen 419 EAIEKTIA 426 (427)
T ss_pred HHHHHHhc
Confidence 99998764
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.45 E-value=6.5e-11 Score=120.01 Aligned_cols=236 Identities=19% Similarity=0.168 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC-
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN- 213 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~- 213 (471)
.+..+..|+. +| ....-+++||++.++..++.+++.+||.||++.++|-+....+-++|+.++++....+..
T Consensus 73 ~eAqe~aA~~----fg---Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 73 KEAQELAARV----FG---ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred HHHHHHHHHH----hC---CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence 3444444444 44 445789999999999999999999999999999999999999999999999987655442
Q ss_pred ---CcCCHHHHHhhhcc--CC-cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC
Q 012095 214 ---FLLDPKVLESKLTE--KS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL 287 (471)
Q Consensus 214 ---~~ld~e~l~~~l~~--~~-~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (471)
.+++.+.+++++.+ .. |+++|.+|+. .|.+++ +++|.+.+... ++|+.+||++....--....+ ..
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~-~a~v~~deah~~~~~~~~~l~---~~ 217 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHY-GAWVLYDEAHPAHFDFSPMLP---ES 217 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhc-CceEEhhhcCcccccccccCc---ch
Confidence 35799999988743 34 7888888877 799999 88999999999 999999999875321111111 11
Q ss_pred CCCCCceEEEecCCcccCccchhhe-eeEcCH--H-HHHHHHHHHhcccCCCChHHHHHHHHHHh--ccCCChHHHHHHH
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWRLG-YIAGPK--H-FVAACNKIQSQFTSGASSISQKAGVAALG--LGYAGGEVVSKMV 361 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~--~-~i~~l~~~~~~~~~~~~~~~q~aa~~~L~--~~~~~~~~~~~~~ 361 (471)
......++++.|..|.++ ++..+ ++.... . -.+++........++.+.....|...+-+ .+.......++..
T Consensus 218 ~~~~~~~~~tqS~HK~l~--alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~ 295 (557)
T COG1982 218 ALNGGADFVTQSTHKLLA--ALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVI 295 (557)
T ss_pred hhhcCceEEEechhhhhh--hhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 112567899999999984 44544 444442 1 12333333222222222222222222111 1111122233334
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 362 KAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
+..-+.|+.+.+.+.+++++.++.|.
T Consensus 296 ~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 296 DEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred HHHHHHHHHHHHHHHhcCCeeecccc
Confidence 44455566666666666555554443
No 367
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.45 E-value=1e-12 Score=130.05 Aligned_cols=239 Identities=17% Similarity=0.180 Sum_probs=156.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|. ..++- +|.+.+++.+++......+ ......+....+++.+.+..+. ..++++++++++++++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~--~~~~v~f~~sGseAve 90 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG--GLDRVFFANSGSEAVE 90 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST--TEEEEEEESSHHHHHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc--ccceeeeccCchHHHH
Confidence 577899998775 44443 6889999999887643222 2344566777888888776642 4469999999999999
Q ss_pred HHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHcC-------------CEEEEecCCCCCCCcCCHHH--------
Q 012095 170 QAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRISENFLLDPKV-------- 220 (471)
Q Consensus 170 ~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~~~ld~e~-------- 220 (471)
.+++... .++ ..|+....+|++....+...+ ..+..+|.+ ++..
T Consensus 91 ~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~~~~~~~ 163 (339)
T PF00202_consen 91 AALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-------DPAADEEEQACL 163 (339)
T ss_dssp HHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-------CHHHHHHHHHHH
T ss_pred HHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-------ccchhhhHHHHH
Confidence 9998765 233 688888988887553322211 123445543 3222
Q ss_pred --HHhhh----ccCCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCC
Q 012095 221 --LESKL----TEKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWE 292 (471)
Q Consensus 221 --l~~~l----~~~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~ 292 (471)
+++.+ .++..+|++...+.-.| ...+++.+++|.++|++| |+++|.||++..+...|... .....+.+ |
T Consensus 164 ~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~-gillI~DEV~tG~gRtG~~~a~~~~gv~P--D 240 (339)
T PF00202_consen 164 NALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH-GILLIADEVQTGFGRTGKFFASEHYGVDP--D 240 (339)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT-T-EEEEEETTTTTTTTSSSSGHHHHTSSS--S
T ss_pred HHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccc-ccceecccccccccccCCccceecccccC--c
Confidence 22222 23444555543344455 466788999999999999 99999999999874333211 11122222 2
Q ss_pred ceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc
Q 012095 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL 349 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~ 349 (471)
|+ +|+|.++ .|+.+|.+++++++.+.+.......+++.++++..++.+.|+.
T Consensus 241 --iv--~~gK~l~-gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~ 292 (339)
T PF00202_consen 241 --IV--TFGKGLG-GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEI 292 (339)
T ss_dssp --EE--EEEGGGG-TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHH
T ss_pred --cc--ccccchh-hhhhcccccccchhhccccccccccccccchHhhhhhhhHHHh
Confidence 33 3679998 7899999999999998775544556777889999998888874
No 368
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.7e-10 Score=107.58 Aligned_cols=328 Identities=16% Similarity=0.186 Sum_probs=213.8
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHH---HcC----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAI---REG----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~---~~~----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
...++|.|..|....-++....+..+.+. .++ +++ ....-.++-+.+.+++.-.-| ..+.+++++.+++
T Consensus 28 lp~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~--a~~~W~~lp~~lgdklApLiG--A~~~Evvv~dtts 103 (407)
T COG3844 28 LPGGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNK--AKADWFDLPERLGDKLAPLIG--ARAGEVVVTDTTS 103 (407)
T ss_pred CCCCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcc--cCCchhhchhHHHHHhhhhhc--CCCCceEEeCCcc
Confidence 34579999999877665444433333333 221 121 123345566677777766666 4678999999999
Q ss_pred HHHHHHHHHhcC--CCCeEEEcCC-CCCChH----HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 166 QSILQAVLAVCS--PGDEVIIPAP-FWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 166 ~al~~~~~~l~~--~gd~Vlv~~p-~y~~~~----~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
-.++.++.+.++ +|+.|++++- +|++-. ..++..|.. +.+ ...+.++++++++++++.++++++.+
T Consensus 104 ~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~~~~~P~~~~~~~~dd~AvV~L~~V~ 176 (407)
T COG3844 104 INLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----EGVIAPRALEEAITDDVAVVLLSHVN 176 (407)
T ss_pred hHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----eeeeChHHHHHhhccceEEEEecccc
Confidence 999988888764 5888888764 454422 344454433 111 12357889999999999999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcC
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGP 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~ 317 (471)
.-||..++ +.+|-+++++| +++++-|-+|+...+ .. .+. ..+-.+-+++-.|.++ =||- .+++...
T Consensus 177 y~TGql~d---m~aiT~~AH~~-galv~wDLAHsaGav----p~---~Lh-~~gaDfaigcsyKYLNgGPGa-pa~l~v~ 243 (407)
T COG3844 177 YKTGQLLD---MRAITALAHQH-GALVGWDLAHSAGAV----PV---DLH-AAGADFAIGCSYKYLNGGPGA-PAGLFVA 243 (407)
T ss_pred ccccceee---HHHHHHHHHhc-CceEEeehhcccCCc----ce---eec-ccCCCeeeeeeceeccCCCCC-ceeEEec
Confidence 99999999 89999999999 899999999986322 11 111 1344466777778773 2443 2333333
Q ss_pred HHHHHHH-----------------------HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 318 KHFVAAC-----------------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 318 ~~~i~~l-----------------------~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+...+.. ..+.+.....++.++..+...+|+.. ..--+.+++++--...+++.+.
T Consensus 244 ~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDif--a~~~i~~lR~kSlaLTd~fieL 321 (407)
T COG3844 244 PRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIF--ADVDITELRKKSLALTDYFIEL 321 (407)
T ss_pred cccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhh--hhcCHHHHHHhhhHHHHHHHHH
Confidence 2222211 11122223345555555555566542 1222677777777788888887
Q ss_pred hcCC-C--CCeeeCCCc----ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-
Q 012095 375 FGEL-E--GVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 446 (471)
Q Consensus 375 L~~~-~--g~~~~~p~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~- 446 (471)
++.. + ++++..|.. |-.+.+..| ...++.+.|.++ ||. ..|..++-+|+.+..
T Consensus 322 vEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~qaLi~r-GVi----gD~R~P~vlRfgftPl 382 (407)
T COG3844 322 VEARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQALIDR-GVI----GDFREPDVLRFGFTPL 382 (407)
T ss_pred HHhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHHHHHHc-Ccc----ccccCCCeeeecCccc
Confidence 7753 3 566655532 223444554 567899999887 886 357778999999986
Q ss_pred --CHHHHHHHHHHHHHHHHhh
Q 012095 447 --SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 447 --~~e~i~~~~~~l~~~l~~~ 465 (471)
+-+|+-.+++.|.+++++.
T Consensus 383 Y~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 383 YVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred eechhHHHHHHHHHHHHHHhh
Confidence 7799999999999999764
No 369
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.1e-10 Score=109.96 Aligned_cols=357 Identities=17% Similarity=0.205 Sum_probs=226.7
Q ss_pred HHHHHHhcCCCeEEcCCCCCCCC--C---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE
Q 012095 86 QATALAQAGVSVIRLAAGEPDFD--T---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV 160 (471)
Q Consensus 86 ~~~~~~~~g~~~i~l~~g~~~~~--~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i 160 (471)
+...+++.|.+..-|.+++-... + .-.+.+....++-.+.-.|+.+.+...|.+++.+.+ | -+.++.
T Consensus 28 RE~al~~ag~N~F~l~Sedv~IDLLTDSGTgams~~qwaamm~GDEAYagsrs~~~L~~avkdif----G----fq~~iP 99 (471)
T COG3033 28 REEALKKAGYNPFLLDSEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGSRSYYALADAVKDIF----G----FQYTIP 99 (471)
T ss_pred HHHHHHHcCCCeeeccccceEEEeeccCCcccccHHHHHHHhccchhhcccccHHHHHHHHHHhc----C----ceeeee
Confidence 33456677877777777773221 1 123445555556667788999999999999998886 3 256777
Q ss_pred eCChHHHHHHHHHHhcCCCC-----e-EEEcCCCCCChHHHHHHcCCEEEEecCCCCCC--------CcCCHHHHHhhhc
Q 012095 161 SNGAKQSILQAVLAVCSPGD-----E-VIIPAPFWVSYPEMARIADATPVILPTRISEN--------FLLDPKVLESKLT 226 (471)
Q Consensus 161 t~G~~~al~~~~~~l~~~gd-----~-Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~--------~~ld~e~l~~~l~ 226 (471)
|.-+..+-..++..++++|+ . |+..+..|.+.....+..|+.++-++++...+ ..+|++.|++.|.
T Consensus 100 thQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lid 179 (471)
T COG3033 100 THQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLID 179 (471)
T ss_pred ccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHH
Confidence 87777666666666665543 3 33345556677778889999998888765221 3579999999986
Q ss_pred c----CCcEEEEcC-CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC-CCcccc------CCCCccccccCCCC---C
Q 012095 227 E----KSRLLILCS-PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI-YEHIIY------APATHTSFASLPGM---W 291 (471)
Q Consensus 227 ~----~~~~i~i~~-p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~-y~~~~~------~~~~~~~~~~~~~~---~ 291 (471)
+ +.-.|++.- -|...|+..|.+-++++.++|++| ++.++.|.+ |.+-.| .+....++..+... +
T Consensus 180 evG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky-~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sY 258 (471)
T COG3033 180 EVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY-DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSY 258 (471)
T ss_pred HhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc-CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhh
Confidence 4 344566543 355788999999999999999999 999999976 332222 12223333322100 0
Q ss_pred CceEEEecCCcccCccchhheeeEcCHH----HHHHHHHHHh-----cccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKH----FVAACNKIQS-----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~~~~----~i~~l~~~~~-----~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
.. -..-|.-|- |+..+ -|+++.+++ +-..++...- +...+...=...+.+.-|.+.-. .+|+...++
T Consensus 259 aD-~~~mS~KKD-~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~-~~yl~~Rv~ 334 (471)
T COG3033 259 AD-GCTMSAKKD-GLVNM-GGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVN-FDYLAHRVA 334 (471)
T ss_pred hh-hheeecccc-ceecc-ccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcC-cHHHHHHHH
Confidence 00 122333343 22210 177777655 4444443211 11223344444555555554332 466666554
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC-CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--CC--
Q 012095 363 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DD-- 437 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~-- 437 (471)
..++|.+.|.+. |+.+..|.||.-++++..+... ...+++ .++.|+-.|.++.||-.+--..|. .+
T Consensus 335 ----Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lphip~eqF----paqala~ely~e~GiRavElG~~~~~rd~k 405 (471)
T COG3033 335 ----QVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLPHIPAEQF----PAQALACELYKEAGIRAVELGSFSLGRDPK 405 (471)
T ss_pred ----HHHHHHHHHHhc-CCeeEecCCCceEEeehhhhcCCCChhhC----cHHHHHHHHHHHhCeeeeeeeceecccCCC
Confidence 445677788877 9999999999999988654322 223344 678888889999999766544442 11
Q ss_pred ---------CcEEEEeec---CHHHHHHHHHHHHHHHHh
Q 012095 438 ---------TCIRISYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 438 ---------~~iRis~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
..+|+++.. +.+.++-.++.+++..+.
T Consensus 406 tg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 406 TGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 369999986 778899999988887764
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.42 E-value=1.5e-10 Score=113.92 Aligned_cols=323 Identities=11% Similarity=0.084 Sum_probs=206.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHc--C-------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE-EeCChHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIRE--G-------FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL-VSNGAKQ 166 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~--~-------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~-it~G~~~ 166 (471)
.++|+.|-.. .|++|.+++++.+.+ + ..+.++ -..++.+.+.+.+++.+++| +..+|+ ++.|++.
T Consensus 5 ~~nF~aGPa~--lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGA--LPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIP-DEYGVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcC--CCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCC-CCCeEEEEeccHHH
Confidence 3455555433 377888888876654 1 223322 33566777777888888864 223564 5556999
Q ss_pred HHHHHHHHhcCCCCeEE--EcCCCCCCh-HHHHHHcCCEEEEecCCCCCC--CcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 167 SILQAVLAVCSPGDEVI--IPAPFWVSY-PEMARIADATPVILPTRISEN--FLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 167 al~~~~~~l~~~gd~Vl--v~~p~y~~~-~~~~~~~G~~~~~v~~~~~~~--~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
++..+...|+.+||.++ +....|..- ...++.+| ++..+......+ ..++++.+ .+.++.+.+.+++-.-.|
T Consensus 80 ~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCc
Confidence 99999999999999654 445555432 24566666 554443222222 23456665 234456777777666689
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i 321 (471)
|+.++ ++.+.+ +.++|+|-+-..+. ....+.. + .++..+.-|.+|.+| ++.++.+++++
T Consensus 157 Gv~~~--------~~~~~~-~~llvvD~sS~~~s----~pid~~~----~--dvi~agsQKnlgP~G--ltvvivs~~al 215 (364)
T PRK12462 157 GLQFP--------DAAGLP-DSPLIADMSSDFMS----RPFDVEA----Y--GMVYAHAQKNLGPAG--VTVAIIRRALL 215 (364)
T ss_pred eEecC--------cccccC-CCeEEEEcCchhhC----CCCChHH----c--cEEEeeccccCCCCc--eEEEEECHHHH
Confidence 99887 233346 78999998776421 1112211 2 377778889999777 67888888887
Q ss_pred HHHHHH------------HhcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCCeee---
Q 012095 322 AACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMS--- 384 (471)
Q Consensus 322 ~~l~~~------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~~~~--- 384 (471)
++.... ......+|+.+..+++..+|+.- .++ .++.+.++.+++.+.+++.+++.+|+...
T Consensus 216 ~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i--~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~ 293 (364)
T PRK12462 216 ERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWI--RDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH 293 (364)
T ss_pred hhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 654321 11223367788888887777642 134 68888999999999999999988654322
Q ss_pred -CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 385 -EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 385 -~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
.-.+-+-+.+++++. ....+|.+.+. +.|+.-..|.. .-+.+|+|+-. +.|.++.+++-++++
T Consensus 294 ~~~RS~mnv~f~~~~~-----------~l~~~f~~~a~-~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f 359 (364)
T PRK12462 294 RAARSTMNVAFRFRQP-----------RLDTLFKEQST-EAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDF 359 (364)
T ss_pred hhhcCcceEEEEcCCH-----------HHHHHHHHHHH-HCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHH
Confidence 123456667777643 14566777655 45888777653 35679999876 888888887777776
Q ss_pred HHh
Q 012095 462 LLT 464 (471)
Q Consensus 462 l~~ 464 (471)
-++
T Consensus 360 ~~~ 362 (364)
T PRK12462 360 AIR 362 (364)
T ss_pred HHh
Confidence 543
No 371
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.39 E-value=8e-11 Score=112.08 Aligned_cols=183 Identities=19% Similarity=0.257 Sum_probs=120.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEE-cCCCCCChHHHH-----
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYPEMA----- 196 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv-~~p~y~~~~~~~----- 196 (471)
++|+-. ..=|+.+.+.+++.+| . +.-++ ..++|++|..++..+++|||+++. ...-|.+..+.+
T Consensus 47 TGYGY~---D~GRd~le~iyA~vfg---a-E~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~ 119 (403)
T PF06838_consen 47 TGYGYD---DIGRDKLERIYADVFG---A-EDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGN 119 (403)
T ss_dssp -TT-TT----HHHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSS
T ss_pred CcCCCC---CccHHHHHHHHHHHhC---c-hhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCC
Confidence 556432 3457777777777776 2 33333 247899999999999999999885 445677777665
Q ss_pred -----HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE-cCCCCCcccCCCHHHHHHHHHHHHh-CCCeEEEEcc
Q 012095 197 -----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDE 269 (471)
Q Consensus 197 -----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i-~~p~NPtG~~~~~~~l~~i~~l~~~-~~~~~ii~De 269 (471)
+..|.+...+++.+++ .+|.+.+++++++++|+++| -+-..-+-..++.++++++++++++ +|++++++|+
T Consensus 120 ~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDN 197 (403)
T PF06838_consen 120 GPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDN 197 (403)
T ss_dssp SSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-
T ss_pred CCCChHHhCceeEEEeecCCC--CcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 5678899999998654 49999999999999999998 3455556677899999999999986 4789999999
Q ss_pred CCCccccCCCCccccccCCCCCCceEEEecCCcccCccchh--heeeEcCHHHHHHHHH
Q 012095 270 IYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR--LGYIAGPKHFVAACNK 326 (471)
Q Consensus 270 ~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R--~G~v~~~~~~i~~l~~ 326 (471)
+|++|+-. ..+.-. +-.+..+|+=|..| .|+= -||+++.++++++...
T Consensus 198 CYGEFvE~--~EP~~v------GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~ 247 (403)
T PF06838_consen 198 CYGEFVET--QEPTEV------GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAY 247 (403)
T ss_dssp TTTTTTSS--S-GGGG------T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHH
T ss_pred Ccceeccc--cCcccc------chhheeccceeCCC-CCccCcCCEEechHHHHHHHHh
Confidence 99997632 222222 33389999999986 5432 4899999999998764
No 372
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.37 E-value=1.4e-12 Score=112.74 Aligned_cols=90 Identities=22% Similarity=0.406 Sum_probs=75.0
Q ss_pred eEEcCCCC---CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcEEEeCChHHHHHHH
Q 012095 97 VIRLAAGE---PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 97 ~i~l~~g~---~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~it~G~~~al~~~ 171 (471)
+|.++.|+ |++.+|+.++++..+. ..|++..|.++||+++++|+++.+| +++++++|++|+|+++++..+
T Consensus 59 li~~~i~~~p~~d~~~~~~i~~~~~~~-----a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l 133 (153)
T PLN02994 59 LIEEWIEENPHADICTAEGTIDSFKDI-----ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEII 133 (153)
T ss_pred HHHHHHhCCCccccCCcHHHHHHHHHH-----hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHH
Confidence 44455555 4566666666655552 3488899999999999999999988 678899999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCC
Q 012095 172 VLAVCSPGDEVIIPAPFWVS 191 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~ 191 (471)
+.++++|||.|++++|+|+.
T Consensus 134 ~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 134 MFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHcCCCCEEEEeCCCCCC
Confidence 99999999999999999974
No 373
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.31 E-value=2.5e-09 Score=115.88 Aligned_cols=326 Identities=11% Similarity=0.151 Sum_probs=201.8
Q ss_pred HHHHHHHHHHhcCCCe-EEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 82 AITDQATALAQAGVSV-IRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 82 ~~~~~~~~~~~~g~~~-i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
++......+.+.++.+ ..++.|.-+.-.|+.+.+.+.+.- .-.+.|+|. +|..+..=.+...+.+..|+ +.
T Consensus 50 e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p-~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm--~~ 126 (939)
T TIGR00461 50 EALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENP-GWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGL--PV 126 (939)
T ss_pred HHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCc-hhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCC--Ch
Confidence 3334444454444332 234666655445777775555321 114667664 46555544555555556675 45
Q ss_pred CcEEEeCChHHHHHHHHHHhc-C--CCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 156 DQILVSNGAKQSILQAVLAVC-S--PGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~-~--~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.|.-+..+++++.+.++++.- . ++++|++++-.|+.+...++ ..|.+++.++ +++|++.+ +
T Consensus 127 aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~ 194 (939)
T TIGR00461 127 ANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--D 194 (939)
T ss_pred hhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--C
Confidence 677888888888876666642 2 34899999999999886554 7788887763 34566555 4
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc--
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-- 306 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~-- 306 (471)
+.++++.+|+. +|.+.+ +++|.++++++ +.+++++---..+ .+..-+++++-.|++++ +|.||+
T Consensus 195 ~~~v~~q~Pn~-~G~ied---~~~i~~~~h~~-gal~~~~ad~~al--------~ll~~Pge~GaDi~vg~-~q~fg~p~ 260 (939)
T TIGR00461 195 VFGCLLQYPAT-DGSILD---YKQLIDALHSH-KSLVSVAADLMAL--------TLLTPPGHYGADIVLGS-SQRFGVPM 260 (939)
T ss_pred EEEEEEECCCC-CeEEec---HHHHHHHHHHc-CCEEEEEechHHh--------CCcCCHHHcCCcEEeeC-CCccCCCC
Confidence 66777888876 888876 99999999999 8888874221111 11111222344455542 344443
Q ss_pred --cchhheeeEcCHHHHHHH----------------------------HHHHhcccCCCChHHHHHHHH--HHhccCCCh
Q 012095 307 --TGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVA--ALGLGYAGG 354 (471)
Q Consensus 307 --~G~R~G~v~~~~~~i~~l----------------------------~~~~~~~~~~~~~~~q~aa~~--~L~~~~~~~ 354 (471)
.|--.|++.+++++++.+ ++.+...+.|.+....+.... +.-. ..
T Consensus 261 g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~---G~ 337 (939)
T TIGR00461 261 GYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH---GP 337 (939)
T ss_pred CCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH---CH
Confidence 244467777776666554 122222333443333322222 2222 36
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE--EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY--LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
+.++++.++...+..++.+.|.+. |+++..+ .|| +.++++. .+..++.++|+++ ||.+...
T Consensus 338 ~GL~~iA~~~~~~a~~l~~~L~~~-G~~~~~~--~fF~~~~v~~~~------------~~~~~i~~~~~~~-gi~l~~~- 400 (939)
T TIGR00461 338 KGLKNIARRIHSLTSILANGLEND-PHELINK--TWFDTLTVKVGN------------GISSELLKAAEEF-NINLRAV- 400 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCcccCC--CccceEEEEeCC------------CCHHHHHHHHHHC-CCeeeec-
Confidence 778888888888999999999985 9887654 455 2334431 1578899988876 8887652
Q ss_pred CCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 433 AFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 433 ~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
.++.+++|+.. +.++|+.+++.+.
T Consensus 401 ---~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 401 ---DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred ---CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 24689999986 8899999999884
No 374
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.29 E-value=4.2e-10 Score=112.49 Aligned_cols=272 Identities=17% Similarity=0.180 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCcEEEeCChHHHHHHHHHHhcC--------
Q 012095 111 VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-----PDQILVSNGAKQSILQAVLAVCS-------- 177 (471)
Q Consensus 111 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~l~~-------- 177 (471)
..+.+.+...+......|...+...++.+.+.+++.+.+|.+-. ...=++|+|+++++..++.+..+
T Consensus 54 ~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~ 133 (373)
T PF00282_consen 54 SILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKA 133 (373)
T ss_dssp HHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhh
Confidence 33455666666555555655566789999999999999997611 24568999999999877655421
Q ss_pred CC-----C-eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---C---CcEEEEcCCCCCcccCC
Q 012095 178 PG-----D-EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---K---SRLLILCSPSNPTGSVY 245 (471)
Q Consensus 178 ~g-----d-~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~---~~~i~i~~p~NPtG~~~ 245 (471)
.| + .|++++-+|.+....+..+|..++.||+++ ++.+|+++|++++.+ + +-+|+.+..+..||.+=
T Consensus 134 ~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D 211 (373)
T PF00282_consen 134 KGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID 211 (373)
T ss_dssp HTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-
T ss_pred cccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCccccccc
Confidence 12 2 467778799999999999999999999985 567999999998853 2 22444566778899987
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCcccc-CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH-HHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIY-APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAA 323 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~i~~ 323 (471)
+ +++|+++|+++ ++|+.+|.+|+...+ .+........+. .-.=+.-+++|.++ .....|+++..+. .+..
T Consensus 212 ~---l~~i~~i~~~~-~~wlHVDaA~gg~~~~~~~~~~~~~gi~---~adSit~d~HK~l~-~P~~~~~~l~r~~~~l~~ 283 (373)
T PF00282_consen 212 P---LEEIADICEKY-NIWLHVDAAYGGSALLSPEYRHLLFGIE---RADSITIDPHKWLG-VPYGCGVLLVRDKSDLRD 283 (373)
T ss_dssp S---HHHHHHHHHHC-T-EEEEEETTGGGGGGHCTTGGGGTTGG---GESEEEEETTTTTS--SSS-EEEEESSGGGHHG
T ss_pred C---HHHHhhhcccc-ceeeeecccccccccccccccccccccc---cccccccchhhhhc-CCccceeEEeecccchHH
Confidence 7 99999999999 999999999998332 121111112221 11133456899997 5578899887543 3332
Q ss_pred -H-------HHHH---------hcccCCCCh-HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 324 -C-------NKIQ---------SQFTSGASS-ISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 324 -l-------~~~~---------~~~~~~~~~-~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+ .... ...+...+. +....+...|.. ...+.+.+..++..+..+++.+.|++.+++++..
T Consensus 284 ~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~--~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~ 361 (373)
T PF00282_consen 284 AFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKS--LGREGYRERIRRCIELARYLADRLRKDPRFELVN 361 (373)
T ss_dssp GGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS
T ss_pred HhccChhhhcccccccccccccccccccccccchHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 2 1000 001112222 222222223331 1356788888888999999999999998888764
Q ss_pred -CCcceEEeEe
Q 012095 386 -PQGAFYLFID 395 (471)
Q Consensus 386 -p~~g~~~~~~ 395 (471)
|.-+. +.++
T Consensus 362 ~~~~~~-vcFr 371 (373)
T PF00282_consen 362 EPDLNI-VCFR 371 (373)
T ss_dssp TTSSSE-EEEE
T ss_pred CCCceE-EEEE
Confidence 44444 4444
No 375
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.24 E-value=4.7e-09 Score=102.15 Aligned_cols=230 Identities=18% Similarity=0.155 Sum_probs=156.1
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 98 IRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGT--LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~--~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.+-..|.+.+ .+++.+++..+..... ..|.-..|. ..++ .+++. ..+. ...+.+++++..+.++..++.+
T Consensus 30 ~~t~lG~s~~--~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~---~~~~-~~aea~~ivnnn~aAVll~~~a 102 (395)
T COG1921 30 LMTNLGRSLY--SPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAEL---LCGL-TGAEAAAIVNNNAAAVLLTLNA 102 (395)
T ss_pred eeccCCCccC--CHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHH---Hhcc-cchhheeeECCcHHHHHHHHhh
Confidence 3334455443 5677777777765421 244333333 2233 22222 2343 2467899999999999988888
Q ss_pred hcCCCCeEE-----EcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE-EcCCCCCcccCCCHH
Q 012095 175 VCSPGDEVI-----IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI-LCSPSNPTGSVYPKN 248 (471)
Q Consensus 175 l~~~gd~Vl-----v~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~-i~~p~NPtG~~~~~~ 248 (471)
+..++..|+ ++ +..+...+.++.+|++++.+.... .-...+++.++++++++++ +-+.|.+.=...+
T Consensus 103 l~~~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~-- 175 (395)
T COG1921 103 LAEGKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNYGFTGMLS-- 175 (395)
T ss_pred hccCCeEEEEcccccc-CCCCChhHHHHHcCCEEEEecccC----cCCHHHHHHHhccCCeeEEEEeecccccccccc--
Confidence 877544443 33 678889999999999999997542 2588999999999999887 4445543333455
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
.++++++|++| ++++|+|.+-+..+-.......+.. .+-.+++.|--|.|| |.+-|.++|.+++++++++..
T Consensus 176 -~~~l~~ia~~~-~lpvivD~aSg~~v~~e~~l~~~la----~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~ 247 (395)
T COG1921 176 -EEELVEIAHEK-GLPVIVDLASGALVDKEPDLREALA----LGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHP 247 (395)
T ss_pred -HHHHHHHHHHc-CCCEEEecCCccccccccchhHHHh----cCCCEEEEecchhcC--CCccceEechHHHHHHHHhhh
Confidence 77889999999 9999999988765432212222222 244589999999984 788999999999999998764
Q ss_pred hcccCCCChHHHHHHHHHHhc
Q 012095 329 SQFTSGASSISQKAGVAALGL 349 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~ 349 (471)
-....-......++..++|+.
T Consensus 248 l~Ralrv~K~tla~l~~aLe~ 268 (395)
T COG1921 248 LKRALRVDKETLAALEAALEL 268 (395)
T ss_pred hhhhhhcCcHhHHHHHHHHHH
Confidence 444444566666777777764
No 376
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.11 E-value=4.1e-08 Score=96.16 Aligned_cols=346 Identities=15% Similarity=0.154 Sum_probs=208.7
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
.|.+-..+..|...+.. +...+-..+++.. +...-.-.++..++..+.-..+...++-+ ....=..|.|+++++.++
T Consensus 77 d~~~~~~~vS~~v~~~~-~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~ 154 (491)
T KOG1383|consen 77 DGNPRLGLASGVVYWGE-PELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAA 154 (491)
T ss_pred CCCcccCeeeEEEecCC-cchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHH
Confidence 34334444555544443 2333333333332 22222223577889999988888888755 223336788999995544
Q ss_pred HHHhc----C-CC---CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCccc
Q 012095 172 VLAVC----S-PG---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGS 243 (471)
Q Consensus 172 ~~~l~----~-~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~ 243 (471)
-+..- . .| .+++++.-.+..+...++..+.++..||+++ +.|.+|+..+.+.+++++.+++-.-|+-|+|.
T Consensus 155 ~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~ 233 (491)
T KOG1383|consen 155 KKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGE 233 (491)
T ss_pred HHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccc
Confidence 44321 1 23 3567777777788888999999999999986 67999999999999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHh-CCCeEEEEccCCCccccC-CCCccccccCCCCCCceEEEecC-CcccCccchhheeeEc-CHH
Q 012095 244 VYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYA-PATHTSFASLPGMWERTLTVNGF-SKAFAMTGWRLGYIAG-PKH 319 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~-~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~-SK~~g~~G~R~G~v~~-~~~ 319 (471)
.=+ +++|.++..+ + ++.+.+|.+-+.|+-. +.....-+.+. ...|-.+..- .| ||+.---+||++- +++
T Consensus 234 ~e~---ve~l~~l~~e~w-~ipiHvDa~~GgFi~p~~~~~~~~fdFr--~p~V~Sisa~~HK-YGl~~~G~~~vl~r~k~ 306 (491)
T KOG1383|consen 234 IED---VEKLADLLLEIW-DIPIHVDACLGGFINPAGYLNEEEFDFR--VPGVTSISADGHK-YGLAPAGSSWVLYRNKE 306 (491)
T ss_pred hhh---HHHHHHHHHHHh-CCceeecccCccccccccccCccccccC--CCCceeEeeccce-eeeeecCcEEEEEcccc
Confidence 766 8899999988 9 9999999998887642 11111111221 1222222222 23 3443334788773 333
Q ss_pred HH--------HHHHHHHhcccCC-----CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-C
Q 012095 320 FV--------AACNKIQSQFTSG-----ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-E 385 (471)
Q Consensus 320 ~i--------~~l~~~~~~~~~~-----~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~ 385 (471)
+. +.+..+....+.+ ....+|+++.-.| .++...+..+...+....+.+.++++.++.+. +
T Consensus 307 ~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l-----G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk 381 (491)
T KOG1383|consen 307 LLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL-----GEEGYRENTQNIVETARKLREGIENIKGIKIVGK 381 (491)
T ss_pred cccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhhhccccceecCC
Confidence 22 2222222222221 2222333333222 35666677777888888899999998887765 3
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
|.-+|.+| .-.. .+.-++.+.|.++ |= ..|+-.|-...++=++... .++--++++..|++++++
T Consensus 382 p~vs~~~~-~s~~------------~~i~elsd~l~~~-GW-~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 382 PLVSFILF-GSND------------VNIFELSDLLRKK-GW-ILNALQFPAAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred CcEEEEEc-cCCc------------cchhhhhHHHHhc-Cc-CccccCCCCceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 44344222 2111 2566788877665 53 3343333332333333333 445568888888888888
Q ss_pred hCCC
Q 012095 465 LRPG 468 (471)
Q Consensus 465 ~~~~ 468 (471)
+...
T Consensus 447 l~~~ 450 (491)
T KOG1383|consen 447 LKSL 450 (491)
T ss_pred HHhC
Confidence 7544
No 377
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.10 E-value=3.1e-08 Score=98.83 Aligned_cols=329 Identities=18% Similarity=0.237 Sum_probs=171.0
Q ss_pred HHHHHHHHHhcCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCC
Q 012095 83 ITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLSYTPD 156 (471)
Q Consensus 83 ~~~~~~~~~~~g~~-~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~~~~~~g~~~~~~ 156 (471)
+......+.++... .-.++.|.-+.-.|+.+.+.+.+.- .-.+.|+| ++|..+..-.+...+.+..|+++ .
T Consensus 52 ~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~-ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdv--a 128 (429)
T PF02347_consen 52 LLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRP-EFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDV--A 128 (429)
T ss_dssp HHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCH-HCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSE--E
T ss_pred HHHHHHHHHhcCCCCCccccccccCceeChhhcCccccCh-hhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCc--c
Confidence 33344444443332 2224555544444655555233211 22456776 46766666666677777778643 3
Q ss_pred cEEEeCChHHHHHHHHHHh---cCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhhccCC
Q 012095 157 QILVSNGAKQSILQAVLAV---CSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEKS 229 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~ 229 (471)
|.-+-.|++..-..++++. -+.+++|++++-.|+.+...++ ..|.+++.++.+.++. .| ++++
T Consensus 129 NaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~--~d--------~~~~ 198 (429)
T PF02347_consen 129 NASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGT--TD--------DDDT 198 (429)
T ss_dssp -SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCS--B---------STTE
T ss_pred CCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCC--cc--------ccCe
Confidence 5556667777666555543 2334699999999999988554 4799999999875332 33 5688
Q ss_pred cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc---
Q 012095 230 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM--- 306 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~--- 306 (471)
.+|++.+||. .|.+-+ +++|.++++++ +.++++ -+. .+.... ..-+++++-.|++++ +|.||+
T Consensus 199 a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~-gal~~~-~ad-~~aL~~------l~~Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 199 AAVMVQNPNT-FGVFED---IKEIADIAHAA-GALVIV-GAD-PNALGG------LKSPGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp EEEEEESS-T-TSB--T---HHHHHHHHHHT-T-EEEE-CGG-CCGCCT------C--GGGGT-SEEEEC-CTTTT---C
T ss_pred EEEEeecCCC-CceEee---HHHHHHHHHHc-CCEEEE-ecC-HHHHhC------cCChhhcCccEEeeC-CCCCcccCC
Confidence 8999999986 788877 99999999999 887775 221 111111 112333444577776 677653
Q ss_pred -cchhheeeEcCHHHHHHH----------------------------HHHHhcccCCCChHHHH--HHHHHHhccCCChH
Q 012095 307 -TGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQK--AGVAALGLGYAGGE 355 (471)
Q Consensus 307 -~G~R~G~v~~~~~~i~~l----------------------------~~~~~~~~~~~~~~~q~--aa~~~L~~~~~~~~ 355 (471)
.|--.|++.+.+++++.+ ++-+-..+.|.+....+ ++..+... ..+
T Consensus 265 ~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~---G~~ 341 (429)
T PF02347_consen 265 FGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYL---GPE 341 (429)
T ss_dssp CC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHH---HHH
T ss_pred CCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHh---CHH
Confidence 455678888888777755 22222344555544432 22333333 367
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC
Q 012095 356 VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG 435 (471)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~ 435 (471)
.++++-+....+..++.+.|.++.++.+. ..-||=++..... .....++.++.+.. |+.. .+.
T Consensus 342 GL~~iA~~~~~~A~yl~~~L~~~~~~~~~--~~~f~e~v~~~~~----------~~~~~~l~~~~~~~-gl~~----~~~ 404 (429)
T PF02347_consen 342 GLREIAERIHLNAHYLAERLKKIYGLPFD--NPFFFEFVVVFSK----------DKEVEELLKRGIEG-GLNL----RYP 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCTTBECSS--SSSBSSEEEEESS-----------HHHHHHHHTT-----EEE----GGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccC--CCCceeeeeecCC----------cHHHHHHHHHHHhc-CCCc----ccc
Confidence 89999999999999999999997344443 2334322222110 00122233333322 4322 122
Q ss_pred CCCcEEEEeec--CHHHHHHHHHHH
Q 012095 436 DDTCIRISYAA--SLTTLQAAVERI 458 (471)
Q Consensus 436 ~~~~iRis~~~--~~e~i~~~~~~l 458 (471)
..+++-+++.. ++++|+.+++.|
T Consensus 405 ~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 405 DDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCeEEEEccCCCCHHHHHHHHhcC
Confidence 34577777775 778888888754
No 378
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.08 E-value=2.5e-07 Score=90.05 Aligned_cols=332 Identities=16% Similarity=0.192 Sum_probs=198.3
Q ss_pred HHHHHhcCCCeE-EcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCCCcEEE
Q 012095 87 ATALAQAGVSVI-RLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTPDQILV 160 (471)
Q Consensus 87 ~~~~~~~g~~~i-~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~~~i~i 160 (471)
.+.+..+++... .++.|.-+--+|+.+.+.+.+.- ...+.|+|. +|..+..=.....+....|+++ .|--+
T Consensus 66 l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~p-ewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~V--ANASm 142 (450)
T COG0403 66 LKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENP-EWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDV--ANASM 142 (450)
T ss_pred HHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCc-cccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCc--ccchh
Confidence 333434444222 35666666666877775554321 124677764 4433322233334444467654 35556
Q ss_pred eCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 161 SNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 161 t~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
--++|.+-+.++++.- .+.+.++++.-.|+.+.+.++. .|.+++.++.+ |.+.+++.....+.+++
T Consensus 143 ~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~ 215 (450)
T COG0403 143 LDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVL 215 (450)
T ss_pred hhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEE
Confidence 6677776666555542 2358999999999999987653 46777766653 77888887223678888
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEE-ccCCCccccCCCCccccccCCCCCCceEEEec---CCcccCccch
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS-DEIYEHIIYAPATHTSFASLPGMWERTLTVNG---FSKAFAMTGW 309 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~-De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S---~SK~~g~~G~ 309 (471)
+-+|+. .| ...+++++|.+.++++ +.++++ =|.- ...+..-++.++-.|++++ |.=-+|..|-
T Consensus 216 vQyP~~-~G--~~~~d~~~l~~~~h~~-~al~~v~aDpl---------aL~LL~pPGe~GADIvvG~~QrfGvPmgfGGP 282 (450)
T COG0403 216 VQYPNT-FG--IVEEDLRALIEAAHSA-GALVIVAADPL---------ALGLLKPPGEFGADIVVGSAQRFGVPMGFGGP 282 (450)
T ss_pred EecCCC-CC--ccchhHHHHHHHHhhc-CCEEEEEechh---------HhhccCCccccCCceEEecCcccCCCcCCCCc
Confidence 888874 55 2333599999999998 766653 1111 1223333455666788886 4455566677
Q ss_pred hheeeEcCHHHHHHH----------------------------HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 310 RLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 310 R~G~v~~~~~~i~~l----------------------------~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
..||..+.+++.+++ ++-+-..+.|.+..-.+.+...... +...+.+.++.
T Consensus 283 hag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~-~hGp~GLk~iA 361 (450)
T COG0403 283 HAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAV-YHGPQGLKEIA 361 (450)
T ss_pred ceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHH-HhChHHHHHHH
Confidence 888888888776644 3333344555554433322222211 11467899999
Q ss_pred HHHHHHHHHHHHHhcCCC-CCeeeCCCcceEE--eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012095 362 KAFRERRDFLVKSFGELE-GVKMSEPQGAFYL--FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 438 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~-g~~~~~p~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~ 438 (471)
.+..+...++.++|+++. |+++... .||= .++++.. ....+.++... .|+-+..-. ++
T Consensus 362 ~r~~~~a~~la~~L~~~~~g~~~~~~--~fFdt~~v~~~~~------------~~~~l~~~~~~-~G~~L~~~~----~~ 422 (450)
T COG0403 362 ERIHRLAAYLAAGLKEIGAGVELVFD--HFFDTFTVRVPEE------------VAEALLAAAIA-GGINLRRVD----AD 422 (450)
T ss_pred HHHHHHHHHHHHHHhhcCCceEeccc--cceeeEEEecchh------------HHHHHHHHHHh-cCCceeeec----CC
Confidence 999999999999999762 5666533 5553 3444321 34444554433 366554422 23
Q ss_pred cEEEEeec--CHHHHHHHHHHHHHH
Q 012095 439 CIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 439 ~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
.+=+++.. ++++|+.+++.+...
T Consensus 423 ~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 423 TVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ceEEEeecccCHHHHHHHHHHHhhh
Confidence 55566654 678888888877654
No 379
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.07 E-value=2.7e-07 Score=96.92 Aligned_cols=279 Identities=13% Similarity=0.093 Sum_probs=167.9
Q ss_pred hHHHH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC----C------
Q 012095 110 PVLIA-EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----P------ 178 (471)
Q Consensus 110 p~~v~-~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~----~------ 178 (471)
++.+. +.+...+..+...|...++...+.+.+.+++.+.+|.+ ...=.+|+|+|++...++.+.-+ |
T Consensus 96 ~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~--~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~ 173 (608)
T TIGR03811 96 MPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYK--NGWGHIVADGSLANLEGLWYARNIKSLPFAMKEV 173 (608)
T ss_pred HHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCC--CCCeEEeCChHHHHHHHHHHHHHhhhccchhhhc
Confidence 44444 44444554445556566788999999999999999964 33445788888877654443211 0
Q ss_pred ------------------------------------------CC------eEEEcCCCCCChHHHHHHcCC---EEEEec
Q 012095 179 ------------------------------------------GD------EVIIPAPFWVSYPEMARIADA---TPVILP 207 (471)
Q Consensus 179 ------------------------------------------gd------~Vlv~~p~y~~~~~~~~~~G~---~~~~v~ 207 (471)
|. .|+++.-.|.++..++..+|. .++.||
T Consensus 174 ~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vp 253 (608)
T TIGR03811 174 KPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVP 253 (608)
T ss_pred cccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEee
Confidence 00 477888889999999999999 589999
Q ss_pred CCCCCCCcCCHHHHHhhhcc----C--CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe--EEEEccCCCccc---c
Q 012095 208 TRISENFLLDPKVLESKLTE----K--SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL--LVLSDEIYEHII---Y 276 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~----~--~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~--~ii~De~y~~~~---~ 276 (471)
++ +++.+|++.|++.+.+ + +-+|+-+..+-.+|.+=+.+++.+|++.++++ ++ |+.+|.+|+++. +
T Consensus 254 vD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~-gl~~~lHVDAAyGG~~~~l~ 330 (608)
T TIGR03811 254 VD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKE-GIYFYLHVDAAYGGYGRAIF 330 (608)
T ss_pred cC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHc-CCceeEeeeccccchhhhhh
Confidence 86 4578999999998853 2 22344466777899999944444444444788 77 699999999742 1
Q ss_pred -CCCC-ccc-------------c-----------c-cCCCCCCceEEEecCCcccCccchhheeeEcCH-HHHHHHHHHH
Q 012095 277 -APAT-HTS-------------F-----------A-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQ 328 (471)
Q Consensus 277 -~~~~-~~~-------------~-----------~-~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l~~~~ 328 (471)
++.. ..+ + . .+.+...-.=+.-.++|.+. .....|.++..+ .+.+.+....
T Consensus 331 ~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~-~Py~~G~ll~Rd~~~~~~~~~~a 409 (608)
T TIGR03811 331 LDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGY-IPYSAGGIVIQDIRMRDVISYFA 409 (608)
T ss_pred ccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccc-cCCCeEEEEEeCHHHHHHHhcCc
Confidence 1100 000 0 0 01111111223445889975 556788777654 3333332100
Q ss_pred hc--------------ccCCCChHH--HHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC------CCCee---
Q 012095 329 SQ--------------FTSGASSIS--QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL------EGVKM--- 383 (471)
Q Consensus 329 ~~--------------~~~~~~~~~--q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~------~g~~~--- 383 (471)
.+ +....+.++ ..++...++.-....+.+.++..+.-+.++++.+.|.+. +.+++
T Consensus 410 ~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~ 489 (608)
T TIGR03811 410 TYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPL 489 (608)
T ss_pred chhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEec
Confidence 00 011122222 222222332211135678888888888888888888773 34553
Q ss_pred eCCCcceEEeE
Q 012095 384 SEPQGAFYLFI 394 (471)
Q Consensus 384 ~~p~~g~~~~~ 394 (471)
.+|+-++.+|.
T Consensus 490 ~~pdlniV~Fr 500 (608)
T TIGR03811 490 TKPDFNMVDYV 500 (608)
T ss_pred CCCCcceEEEE
Confidence 56777765443
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.06 E-value=1.7e-07 Score=88.93 Aligned_cols=348 Identities=17% Similarity=0.157 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 012095 80 TVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLS 152 (471)
Q Consensus 80 ~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 152 (471)
+.++.+...+.+..| |.|=..++. +...+.+|+-..+.+.. ..|+.+.-+.++...-.++--+.|+.+
T Consensus 28 v~~ii~~Ek~RQ~~g---ieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ld 102 (477)
T KOG2467|consen 28 VHDIIEKEKERQKRG---IELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLD 102 (477)
T ss_pred HHHHHHHHHHhhhcc---eeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCC
Confidence 345554444444444 444444443 46677788777776532 123333222222222222223346654
Q ss_pred CCCC--cEEEeCChHHHHHHHHHHhcCCCCeEEE---cCCCCCChHHHH--HHcCC-----EEEEecCCCCCCCcCCHHH
Q 012095 153 YTPD--QILVSNGAKQSILQAVLAVCSPGDEVII---PAPFWVSYPEMA--RIADA-----TPVILPTRISENFLLDPKV 220 (471)
Q Consensus 153 ~~~~--~i~it~G~~~al~~~~~~l~~~gd~Vlv---~~p~y~~~~~~~--~~~G~-----~~~~v~~~~~~~~~ld~e~ 220 (471)
-+.+ ||-.-+|+. |...+..+++.|+|+|+- |+..|-++--.. +.-.+ +--++.++++.+ -+|.|.
T Consensus 103 p~kWGVNVQp~SGSP-ANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~ 180 (477)
T KOG2467|consen 103 PEKWGVNVQPYSGSP-ANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDK 180 (477)
T ss_pred HHHCceeeccCCCCc-hhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHH
Confidence 4444 444455555 455588899999999883 333443322111 11011 112233444444 589999
Q ss_pred HHhhhcc-CCcEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCceEEE
Q 012095 221 LESKLTE-KSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 221 l~~~l~~-~~~~i~i~~p~NPtG~~~~~~-~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
|++.... +||+|+- .+..+++. +..++.++|.+. +.+++.|-+|-- ++-.+.-+.+| .. ..|+.
T Consensus 181 Le~~A~~frPk~iia------G~SaY~R~~DYaR~R~Iad~~-gA~Lm~DMAHISgLVAA~vipsPF-ey-----~DiVT 247 (477)
T KOG2467|consen 181 LEKTATLFRPKLIIA------GTSAYSRLIDYARFRKIADKV-GAYLMADMAHISGLVAAGVIPSPF-EY-----CDIVT 247 (477)
T ss_pred HHHHHHhcCCcEEEe------ccccchhhccHHHHHHHHHhc-CceeehhhhhHHHHHhcccCCCcc-cc-----cceee
Confidence 9986543 7887663 22333333 256677778888 899999999864 33333222222 22 23888
Q ss_pred ecCCcccCccchhheeeEcCH-----------H----HHHHHHHH-HhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 298 NGFSKAFAMTGWRLGYIAGPK-----------H----FVAACNKI-QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~-----------~----~i~~l~~~-~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
.|..|++ -|-|-|.+.-.+ + +-+++... ......+|......+.+.+|.... .....+..
T Consensus 248 TTTHKsL--RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~--tpefk~Yq 323 (477)
T KOG2467|consen 248 TTTHKSL--RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM--TPEFKEYQ 323 (477)
T ss_pred ccccccc--cCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhC--CHHHHHHH
Confidence 8999996 788888876532 1 22222221 112233455555556666676432 23455666
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----
Q 012095 362 KAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---- 436 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---- 436 (471)
++..++.+.+.+.|.+. |.++.. ...+..+.+++... + ..-.-+++.++..+|.+.--..||.
T Consensus 324 ~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~-G----------~dGarvE~vle~~~I~~NKNtvpGD~Sal 391 (477)
T KOG2467|consen 324 KQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPK-G----------VDGARVEKVLELCHIALNKNTVPGDKSAL 391 (477)
T ss_pred HHHHHHHHHHHHHHHHc-CceEecCCccceEEEEecccc-C----------CchHHHHHHHHHhhhhhcCCcCCCCcccc
Confidence 66777888888888887 887753 33455677777643 1 2334456667766777665555553
Q ss_pred -CCcEEEEeec------CHHHHHHHHHHHHHHHH
Q 012095 437 -DTCIRISYAA------SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 437 -~~~iRis~~~------~~e~i~~~~~~l~~~l~ 463 (471)
++.+|+...+ .++|+++..+-|.++++
T Consensus 392 ~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 392 SPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 5789997543 56888888887777654
No 381
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.05 E-value=7.1e-08 Score=93.69 Aligned_cols=306 Identities=20% Similarity=0.191 Sum_probs=187.7
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEE--eCChHH---HHHHHHHHh-cCCC----CeEEEcCCCCCChHHHHHHcC
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILV--SNGAKQ---SILQAVLAV-CSPG----DEVIIPAPFWVSYPEMARIAD 200 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i--t~G~~~---al~~~~~~l-~~~g----d~Vlv~~p~y~~~~~~~~~~G 200 (471)
.+|+.++...+.+|+.+--|. +.|.+ ..|++. ++. +++.. -..| +.||+|+-.+.+....+..+|
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll-~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G 178 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLL-AIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAG 178 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHH-HHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcC
Confidence 378899999999999987774 23433 334433 232 34433 2233 689999999999999999999
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT 280 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~ 280 (471)
.+++.|+.+.++ .+|+++|++++.+++.++.|+|||. -| ++ ++.+++|+++.+++ |..|..|-+--.-..+-.
T Consensus 179 ~~VV~V~~~~~G--~VDlddLk~k~~~~~AalMiTnPsT-~G-vF-E~~I~ei~~ivH~~-Gg~vY~DGANlNA~vG~~- 251 (496)
T COG1003 179 FKVVVVKCDENG--NVDLDDLRAKAEDNLAALMITNPST-LG-VF-EEDIREICEIVHEA-GGQVYYDGANLNAIVGLA- 251 (496)
T ss_pred ceEEEEecCCCC--CccHHHHHHHhccceeEEEeccCcc-cc-cc-hhhHHHHHHHHHHc-CCEEEecCcchhhhhccc-
Confidence 999999998655 4999999999999999999998874 23 33 45699999999999 999999987654322211
Q ss_pred ccccccCCCCCCceEEEecCCcccCc----cchhheeeEcCHHHHHHHHH------HH--------------hcccCCCC
Q 012095 281 HTSFASLPGMWERTLTVNGFSKAFAM----TGWRLGYIAGPKHFVAACNK------IQ--------------SQFTSGAS 336 (471)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~R~G~v~~~~~~i~~l~~------~~--------------~~~~~~~~ 336 (471)
-+++.+-.|+=--+.|+|+. .|--.|=+...++++..+-. .. ....++.-
T Consensus 252 ------rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~ 325 (496)
T COG1003 252 ------RPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA 325 (496)
T ss_pred ------cccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcc
Confidence 11222222333346777743 33345545444444333211 00 00011111
Q ss_pred hHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCCC--cceEEeEecCCccCCcccCCCCCCCH
Q 012095 337 SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQ--GAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 337 ~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
++-..+-...+.. ..+.+++.-+.---+.+++.+.|+.. +++ +.+. ...=+.++..... + +.....
T Consensus 326 ~il~~a~~YI~~m---G~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~----~--~~Gv~~ 394 (496)
T COG1003 326 SILPIAWAYIRMM---GADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLK----K--ETGVRA 394 (496)
T ss_pred hHHHHHHHHHHHH---hHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhH----h--hcCCcH
Confidence 2222222222222 34556666666667888899999863 222 1222 1221233333110 0 111378
Q ss_pred HHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 414 ESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+++++|+.. |+.. |--.|- ..+.+-|=... +.++++++++++.++.++.+.
T Consensus 395 ~DvAKrLlD~-GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 395 LDVAKRLLDY-GFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred HHHHHHHHhc-CCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999999975 7753 323343 45777776665 678999999999988876543
No 382
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.96 E-value=2.1e-08 Score=92.68 Aligned_cols=183 Identities=17% Similarity=0.265 Sum_probs=123.0
Q ss_pred CCCCC-CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChHHH--------
Q 012095 126 TRYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEM-------- 195 (471)
Q Consensus 126 ~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~-------- 195 (471)
++|+- +.|-..|.+..|+- +|..-..-+.-+. ++++++..++..+++|||+.+.-. --|....+.
T Consensus 58 tGYGydD~GRdtLe~vyA~v----f~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQV----FGAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred CCCCccccchhHHHHHHHHH----hccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc
Confidence 45542 34444444444444 4522111122233 567889999999999999987543 334444443
Q ss_pred --HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc-CCCCCcccCCCHHHHHHHHHHHHh-CCCeEEEEccCC
Q 012095 196 --ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIY 271 (471)
Q Consensus 196 --~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~-~p~NPtG~~~~~~~l~~i~~l~~~-~~~~~ii~De~y 271 (471)
.+..|.....+|+..++ .+|.+.+++.+++++|+|.|- +-..----.++.+++++++++.++ +|++++.+|++|
T Consensus 133 gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY 210 (416)
T COG4100 133 GSLKDFGIKYKAVPLTADG--KIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY 210 (416)
T ss_pred ccHHHhCcceeecccccCC--cccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 35677888888887554 599999999999999999873 222222234788899999999987 578999999999
Q ss_pred CccccCCCCccccccCCCCCCceEEEecCCcccCccchh--heeeEcCHHHHHHH
Q 012095 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR--LGYIAGPKHFVAAC 324 (471)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R--~G~v~~~~~~i~~l 324 (471)
++|+-. ..+.-. +-.+..+|+-|.-| .|+- -||+.+.++++++.
T Consensus 211 GEFvE~--~EPt~v------GaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 211 GEFVEE--KEPTHV------GADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred hhhhhc--cCcccc------chhhhccceeeCCC-CceeeccceeechHHHHHhh
Confidence 998632 222221 22377889989876 4432 38999999999865
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.87 E-value=3.8e-09 Score=102.04 Aligned_cols=215 Identities=21% Similarity=0.207 Sum_probs=56.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC------ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV------SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~------~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
..+..+++|+...++.+++.+++ +|.+|++....-. -..++++..|++++.|-... .-.++++++++++
T Consensus 61 gAeaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN----~t~~~Dye~AI~e 135 (367)
T PF03841_consen 61 GAEAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN----RTHLSDYEKAITE 135 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc----ccccccccccccc
Confidence 35677788888888888888876 5777877654322 14567889999999998642 2478899999999
Q ss_pred CCcEEEEcCCCCCc--ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccc----cCCCCccccccCCCCCCceEEEecCC
Q 012095 228 KSRLLILCSPSNPT--GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII----YAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 228 ~~~~i~i~~p~NPt--G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~----~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
+|.+|+-.+++|-. |..-.. .++++++++++| ++++|+|-.-+.+. |+-...+++..... .+-.+++.|-.
T Consensus 136 ~Ta~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~-~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~-~GaDlV~fSGd 212 (367)
T PF03841_consen 136 NTAALLKVHTSNFRIQGFTGEV-SLEELAELAKEH-GLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLA-AGADLVTFSGD 212 (367)
T ss_dssp --------------------------HHHHHHHHH-T--EEEE-TTHHHHHHHTT----------CCC-CT-SEEEEETT
T ss_pred cccccccccccccccccccccc-cHHHHHHHHhhc-CCcEEEECCCCCCcCcccccCccccHHHHHhh-cCCCEEEEECC
Confidence 99999888887753 322222 289999999999 99999998764332 11112234444322 35568999999
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC---------ChHHHHHHHHHHHHHHHHHH
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA---------GGEVVSKMVKAFRERRDFLV 372 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---------~~~~~~~~~~~~~~~r~~l~ 372 (471)
|.+| |-..|.+++.+++|+++++..-.-.+-..-+...+..+.|..-.. ...++....+.++++.+.+.
T Consensus 213 KlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~ 290 (367)
T PF03841_consen 213 KLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLA 290 (367)
T ss_dssp SSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------
T ss_pred CcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccc
Confidence 9986 566899999999999998754433444667777777777664110 01224444556667777777
Q ss_pred HHhcCC
Q 012095 373 KSFGEL 378 (471)
Q Consensus 373 ~~L~~~ 378 (471)
..|...
T Consensus 291 ~~l~~~ 296 (367)
T PF03841_consen 291 AQLKAA 296 (367)
T ss_dssp ------
T ss_pred cccccc
Confidence 777664
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.84 E-value=4.5e-07 Score=83.91 Aligned_cols=346 Identities=12% Similarity=0.085 Sum_probs=185.4
Q ss_pred CCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDT-PVLIAEAGINAIREGF--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
|...+|.-.|.--.+. +|++.+|...++..-. .++- ..+|-+......+.. ..-+-++++|+++++..+
T Consensus 46 g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~RFl----hd~lv~cA~~l~stl----PeLsvc~F~NSGSEANDL 117 (452)
T KOG1403|consen 46 GTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNRFL----HDELVQCARTLTSTL----PELSVCFFVNSGSEANDL 117 (452)
T ss_pred cccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccchhh----HHHHHHHHHHHhhcC----CCceEEEEecCCchhhHH
Confidence 4444443333322232 6778888877665321 2221 123333332222211 123567889999999999
Q ss_pred HHHHhcC--CCCeEEEcCCCCCChHHH-HHH------cCC-----EEEEe-cCCC------------CCC-CcCCHHHHH
Q 012095 171 AVLAVCS--PGDEVIIPAPFWVSYPEM-ARI------ADA-----TPVIL-PTRI------------SEN-FLLDPKVLE 222 (471)
Q Consensus 171 ~~~~l~~--~gd~Vlv~~p~y~~~~~~-~~~------~G~-----~~~~v-~~~~------------~~~-~~ld~e~l~ 222 (471)
+++..-+ ...-|++.+..|.+.... ++. .|. +.+.| |+.. +.+ ...-.+.++
T Consensus 118 ALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk 197 (452)
T KOG1403|consen 118 ALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVK 197 (452)
T ss_pred HHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHH
Confidence 8887532 334455666667655422 111 011 11111 1110 000 001123344
Q ss_pred hhhc----cCC--cEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceE
Q 012095 223 SKLT----EKS--RLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTL 295 (471)
Q Consensus 223 ~~l~----~~~--~~i~i~~p~NPtG~~~~~~-~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i 295 (471)
+.++ +.. .+.+-.+-++-.|.++|+. ..+++++..+.+ +-+.|.||+..+|-.-|.. +|.+. .++-+-
T Consensus 198 ~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a-GGv~IaDEVQvGFGRvG~h---yWafq-~y~fiP 272 (452)
T KOG1403|consen 198 EICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA-GGVCIADEVQVGFGRVGSH---YWAFQ-TYNFIP 272 (452)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC-CCeEEeehhhhcccccchh---hhhhh-hhcccc
Confidence 4332 222 2223345577778766654 689999999999 7788889999886433332 23221 122222
Q ss_pred EEecCCcccCccchhheeeEcCHHHHHHHHH--HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~--~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (471)
-+-++.|.+| .|..++.++..+++.+++.. .....+++.++.+.+++.+.++.-. . +++.+.-++.-++|..
T Consensus 273 DIVtmgKpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e--~---E~Lq~ha~~vG~~L~~ 346 (452)
T KOG1403|consen 273 DIVTMGKPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCE--D---ENLQEHAQQVGEKLEV 346 (452)
T ss_pred chheecccCC-CCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHh--h---hhHHHHHHHHHHHHHH
Confidence 3556889999 99999999999999999875 3444577889999988888887411 1 1222222333333333
Q ss_pred HhcCCC-CCeeeC--CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe--ecCH
Q 012095 374 SFGELE-GVKMSE--PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY--AASL 448 (471)
Q Consensus 374 ~L~~~~-g~~~~~--p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~--~~~~ 448 (471)
.|+++. ..+++. -.-|.|+-+++-+......+. -..+.-+..+|.+.++|++..-.+ ..+-+.|-. +-++
T Consensus 347 lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~---tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFne 421 (452)
T KOG1403|consen 347 LLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPD---TKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNE 421 (452)
T ss_pred HHHHHhhhccceeccccceEEEeeeeecccccCCCc---HHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccCh
Confidence 333320 122221 233666766664321110000 012344556777888898865321 123445543 3388
Q ss_pred HHHHHHHHHHHHHHH
Q 012095 449 TTLQAAVERIKKGLL 463 (471)
Q Consensus 449 e~i~~~~~~l~~~l~ 463 (471)
++.++.+..|.++|.
T Consensus 422 ena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 422 ENADEFVLGLDEILT 436 (452)
T ss_pred hhHHHHHHHHHHHHH
Confidence 888888888888775
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.81 E-value=4.7e-06 Score=90.42 Aligned_cols=329 Identities=13% Similarity=0.124 Sum_probs=193.1
Q ss_pred HHHHHHHHHHhcCCC-eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCCCC
Q 012095 82 AITDQATALAQAGVS-VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN-----AGTLELRSAICHKLKEENGLSYTP 155 (471)
Q Consensus 82 ~~~~~~~~~~~~g~~-~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~-----~G~~~lr~~ia~~~~~~~g~~~~~ 155 (471)
++....+.+..+++. ...++.|.-+--.|..+.+.+.+.- .-.+.|+|. +|..+..=.....+.+..|+++.
T Consensus 65 e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~-~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~va- 142 (954)
T PRK12566 65 AALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENP-GWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLA- 142 (954)
T ss_pred HHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCc-hhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhh-
Confidence 333444444444432 3446666666556777755554321 124667764 45544444444455555676543
Q ss_pred CcEEEeCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 156 DQILVSNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
|--+-.|++.+-+.++++.- .+...|++++-.++.+...++ ..|.+++. +++++.+.++
T Consensus 143 -NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~ 208 (954)
T PRK12566 143 -NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHA 208 (954)
T ss_pred -hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCC
Confidence 44444565554443333331 224689999999999887654 45666553 3344455556
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe---cCCcccC
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN---GFSKAFA 305 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~---S~SK~~g 305 (471)
+.++++.+|+. .|.+-+ +++|.++++++ +.++|+ .+. .+ ...+..-++.++-.|+++ +|+=-+|
T Consensus 209 ~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~-gal~~~-~~d-~l------aL~ll~~Pge~GADI~vG~~Q~fGvp~~ 275 (954)
T PRK12566 209 VFGALLQYPDT-HGEIRD---LRPLIDQLHGQ-QALACV-AAD-LL------SLLVLTPPGELGADVVLGSTQRFGVPMG 275 (954)
T ss_pred EEEEEEECCCC-ceEEcc---HHHHHHHHHHc-CCEEEE-EeC-HH------HHhCCCChhhcCCcEEeeCCCcCCCCCC
Confidence 77888888875 788855 99999999998 776552 211 11 111222244456667777 3555555
Q ss_pred ccchhheeeEcCHHHHHHH----------------------------HHHHhcccCCCChHHHHHHHHHHhccCCChHHH
Q 012095 306 MTGWRLGYIAGPKHFVAAC----------------------------NKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l----------------------------~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~ 357 (471)
..|--.||+.+.+++.+++ ++-+-..+.|.+..-.+.+.+.... ....+.+
T Consensus 276 ~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~-~~Gp~Gl 354 (954)
T PRK12566 276 YGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAV-YHGPEGL 354 (954)
T ss_pred CCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHH-HhChHHH
Confidence 5666688888888777755 2223334445444333222222211 0135778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC
Q 012095 358 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD 437 (471)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~ 437 (471)
+++.++...+..++.+.|.+. |+++... .||=-+.+.-. ....++.+..+++ ||-++--. +
T Consensus 355 ~~ia~~~~~~a~~l~~~l~~~-g~~~~~~--~fF~~~~v~~~-----------~~~~~~~~~a~~~-~~n~r~~~----~ 415 (954)
T PRK12566 355 KRIAQRVHRLTAILAAGLEAK-GIKRLNR--HFFDTLTLEVG-----------GAQAAIIESAEAA-RINLRILG----R 415 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCccccC--CccceEEEEcc-----------CCHHHHHHHHHHC-CCeeEEeC----C
Confidence 888888888999999999984 8876532 56643333211 0356677766655 77665532 4
Q ss_pred CcEEEEeec--CHHHHHHHHHHHH
Q 012095 438 TCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 438 ~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
+.+.+|+.. +.++++..+..+.
T Consensus 416 ~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 416 GRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHhc
Confidence 578888886 7889998888874
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.62 E-value=5e-06 Score=81.29 Aligned_cols=308 Identities=18% Similarity=0.171 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEeCChHHH-HHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC-
Q 012095 138 RSAICHKLKEENGLSYTPDQILVSNGAKQS-ILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN- 213 (471)
Q Consensus 138 r~~ia~~~~~~~g~~~~~~~i~it~G~~~a-l~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~- 213 (471)
-..+...+-+..|.. +....++.+.+|.. +.+.+.++- ..++.|+.+.-.+.+-...+..+|.+++.|+...+++
T Consensus 58 tn~l~~d~~~~~G~~-~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~ 136 (389)
T PF05889_consen 58 TNSLVLDALRLAGLR-SVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDE 136 (389)
T ss_dssp HHHHHHHHHHHTTHT-THCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTE
T ss_pred HHHHHHHHHHHcCCc-cccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCe
Confidence 333333333446753 33567777766553 333344442 3568999888777777778899999999999644333
Q ss_pred CcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC-CCccccccCCC
Q 012095 214 FLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPG 289 (471)
Q Consensus 214 ~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~ 289 (471)
..-|++.+++.+++ ...+.++++++---|.. .+++++|+++|++| |+..|+-.+|+-=...- +........
T Consensus 137 l~td~~~ie~~i~~~G~~~iLcvltttscfapr~--~D~i~~IakiC~~~-~IPhlvNnAYgvQ~~~~~~~i~~a~~~-- 211 (389)
T PF05889_consen 137 LITDLEAIEAKIEELGADNILCVLTTTSCFAPRL--PDDIEEIAKICKEY-DIPHLVNNAYGVQSSKCMHLIQQAWRV-- 211 (389)
T ss_dssp EEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB------HHHHHHHHHHH-T--EEEEGTTTTT-HHHHHHHHHHHHH--
T ss_pred eeccHHHHHHHHHHhCCCCeEEEEEecCccCCCC--CccHHHHHHHHHHc-CCceEEccchhhhHHHHHHHHHHHHhc--
Confidence 34477888888753 34455566553222332 33699999999999 99999999997410000 000000000
Q ss_pred CCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC-ChHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA-GGEVVSKMVKAFRER 367 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~-~~~~~~~~~~~~~~~ 367 (471)
..-.+++.|.-|.| |.+.--+.+.+ .+..+..+.+....-.+..+. ......+|..|.. ....+.++.+.+...
T Consensus 212 -GRvda~vqS~dkNF-~VPvGgai~As~~~~~i~~vs~~YpGRas~sp~--ld~~itLl~LG~~g~~~ll~~r~~~f~~l 287 (389)
T PF05889_consen 212 -GRVDAFVQSTDKNF-MVPVGGAIMASFDPSGILAVSKEYPGRASASPS--LDLFITLLSLGCTGYGALLKERKASFPYL 287 (389)
T ss_dssp -STCSEEEEEHHHHH-CEESSHEEEEESSHHHHHHHHHTSHSHBTSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcceeeeecCCCE-EecCCCcEEEecCHHHHHHHHHHhhhhhhcccc--hHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 11127899999999 45544455554 456777776543222322233 3334444443210 012233333333333
Q ss_pred HHHHHHHhcCCCCCeee-CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCE---E-EECCCCCC-------
Q 012095 368 RDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV---A-LVPGDAFG------- 435 (471)
Q Consensus 368 r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV---~-v~pg~~f~------- 435 (471)
.+.+.+.-++. |-.+. .|....-+.+.++...... + .+...|...|..+ || . +.|+..+.
T Consensus 288 ~erl~~~aee~-~e~ll~~p~N~is~a~tl~~l~~~~--~----k~~~~lgs~Lf~R-~VsG~RvV~~~~~~~tsh~~~y 359 (389)
T PF05889_consen 288 KERLKKWAEEV-GERLLETPRNHISMAFTLDTLYEIS--Q----KDGTFLGSMLFKR-GVSGIRVVTPGGKKQTSHSSNY 359 (389)
T ss_dssp HHHHHHHHHHT-TEEBSSSTT-SSEEEEE-TTCCTCC--S----SHHHHHHHHHHHT-TEESSEEEETSSCEEETTSS--
T ss_pred HHHHHHHHHHh-hhhhcCCCCCCeeEEEECccchhhc--c----chhhhHHHHHHhC-CcccceeeccCCCcccccCCCC
Confidence 33333332223 32222 2444444555555331100 0 1345677777776 55 3 44433321
Q ss_pred CCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 436 DDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 436 ~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
+-.|+-++.+. +.||++.++++|+++++
T Consensus 360 p~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 360 PCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 12577775443 99999999999999875
No 387
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.61 E-value=1.5e-05 Score=76.54 Aligned_cols=328 Identities=11% Similarity=0.115 Sum_probs=184.3
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCC------CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEe-CChHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYT------PNAGTLELRSAICHKLKEENGLSYTPDQILVS-NGAKQSI 168 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~------~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it-~G~~~al 168 (471)
+.+|+.|-... |+++.+.+++.+.+- -.+++ -..-..++.+...+.+.+.+++|-+ -+|++. .|++...
T Consensus 6 ~~nFsaGPa~l--p~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~-Y~VlflqGGat~qf 82 (365)
T COG1932 6 VYNFSAGPAAL--PPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDD-YKVLFLQGGATGQF 82 (365)
T ss_pred CCCCCCCcccC--CHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCccHHHH
Confidence 56677765443 555555555544331 11111 1112245556666777778887633 355555 5678888
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChH-HHHHHcCCEEEEecCC-CCCCC--cCCHHHHHhhhccCCcEEEEcCCCCCcccC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTR-ISENF--LLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~~v~~~-~~~~~--~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~ 244 (471)
..+...|+..+..-.+....|.... ..++..+-.+...... .+.+| -++++.+. +.++...|.+|.=.--+|+-
T Consensus 83 ~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~ 160 (365)
T COG1932 83 AMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVE 160 (365)
T ss_pred HHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceE
Confidence 8888888866533123344444332 2344444322211111 12222 33444333 33333334444333456776
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l 324 (471)
++. ...+ -++.++|+|-.-..+. ....+..+ .++..+-=|.+|..| ++.++.++++++++
T Consensus 161 v~~--~p~~------~~~~~~v~D~SS~ils----r~iDvsk~------dviyagaQKnlGpaG--ltvvIvr~~~l~r~ 220 (365)
T COG1932 161 VPE--LPDI------GSDGLLVADASSAILS----RPIDVSKY------DVIYAGAQKNLGPAG--LTVVIVRPDLLERA 220 (365)
T ss_pred ccC--CCCC------CCCceEEEecccHHhc----CCCChhHc------ceEEEehhhccCccc--eEEEEEcHHHHhcc
Confidence 661 1100 0137788886655431 12222222 266777889999888 89999999999887
Q ss_pred HHH-------------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee----eCCC
Q 012095 325 NKI-------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM----SEPQ 387 (471)
Q Consensus 325 ~~~-------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~----~~p~ 387 (471)
... ...+.-+|+.++.+.....++... .+..++.+.++-+++.+.|++.+++- ++.. ....
T Consensus 221 ~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk-~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~R 298 (365)
T COG1932 221 ESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK-SQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANR 298 (365)
T ss_pred cccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHHhC-Cccccccchhhc
Confidence 543 112223456666555555544311 12347788888899999999999885 3311 1334
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+-|-+.+++.+. .-+..|...+.+ .|+...-|. ...+.+|+|+.. +.|+++.+++-++.+.++.
T Consensus 299 S~mnV~f~~~~~-----------~ld~~fv~eae~-~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~f~~~~ 364 (365)
T COG1932 299 SRMNVTFTLVDA-----------ELDKGFVAEAEA-AGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDWFEETY 364 (365)
T ss_pred cceeEEEEcCcH-----------HHHHHHHHHHHH-cCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHHHHHhh
Confidence 556677777643 134567776555 477777773 334569999987 7888888888887776543
No 388
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.52 E-value=3.9e-05 Score=74.68 Aligned_cols=324 Identities=15% Similarity=0.178 Sum_probs=184.5
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC--C-----C-----CeEE-EcCCCC
Q 012095 123 EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--P-----G-----DEVI-IPAPFW 189 (471)
Q Consensus 123 ~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~--~-----g-----d~Vl-v~~p~y 189 (471)
.+...|--.++..-..+.+-..+.+.-|++...+.|+--.|+...++.+.-+--+ | | +-|+ +.+-+|
T Consensus 128 tn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesH 207 (510)
T KOG0629|consen 128 TNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESH 207 (510)
T ss_pred CCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccch
Confidence 3455665555655566666666666678765557777666777777755443211 1 2 3344 567788
Q ss_pred CChHHHHHHcC---CEEEEecCCCCCCCcCCHHHHHhhhcc-C-----CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 190 VSYPEMARIAD---ATPVILPTRISENFLLDPKVLESKLTE-K-----SRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 190 ~~~~~~~~~~G---~~~~~v~~~~~~~~~ld~e~l~~~l~~-~-----~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
.+...++..+| -.++.|+.+.. ..+++++|++.|-+ + |-.+-.+....--|..=+ +..|+++|++|
T Consensus 208 YSi~kaAa~lg~gtd~c~~v~t~e~--Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~ 282 (510)
T KOG0629|consen 208 YSIKKAAAFLGLGTDHCIKVKTDER--GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKH 282 (510)
T ss_pred hhHHHHHHHhccCCceeEEeccccc--CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhc
Confidence 89999999998 67888888753 46999999998843 2 222223334556777777 99999999999
Q ss_pred CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH-HHHHHHHHHhcccC------
Q 012095 261 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAACNKIQSQFTS------ 333 (471)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~i~~l~~~~~~~~~------ 333 (471)
++|+.+|.+|++...-...+... +.+-..---+..+..|.+| ..+..+..+...+ ++++.......+-+
T Consensus 283 -~lWmHvDAAwGGglLmS~k~R~k--l~Giera~SvtwnpHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y 358 (510)
T KOG0629|consen 283 -KLWMHVDAAWGGGLLMSRKHRHK--LTGIERANSVTWNPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY 358 (510)
T ss_pred -CEEEEeecccccccccChhhHhh--ccCccccCceeecHHHhhc-CcchhhHHHHHHHHHHHhhcccchhhhhccCcee
Confidence 99999999998733212211111 1111111134556789998 6677777665443 33333211100000
Q ss_pred ---------------CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-e--CCC-cceEEeE
Q 012095 334 ---------------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-S--EPQ-GAFYLFI 394 (471)
Q Consensus 334 ---------------~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~--~p~-~g~~~~~ 394 (471)
....+-......+- .....++.++.+-+.++++.+.+++-+|... . .|+ .++..|.
T Consensus 359 dvS~DTgdK~iQCGRh~D~FKlWlmwkaK-----G~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~ 433 (510)
T KOG0629|consen 359 DVSYDTGDKAIQCGRHVDVFKLWLMWKAK-----GTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY 433 (510)
T ss_pred ecccccccchhhcCccccHHHHHHHHHhc-----ccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc
Confidence 01111111111111 1234677788888999999999999867433 2 255 3443443
Q ss_pred ecCCccCC-cc--cCCCC-CCCHHHHHHHHHHcCCEEEECCCCCC-CCCcEEEEeec---CHHHHHHHHHHHHHHH
Q 012095 395 DFSTYYGS-EA--EGFGK-IENSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAA---SLTTLQAAVERIKKGL 462 (471)
Q Consensus 395 ~~~~~~~~-~~--~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~-~~~~iRis~~~---~~e~i~~~~~~l~~~l 462 (471)
+|+.+.. +. +.... ..-+..+-..++++ |-...--.+.+ .++++|+-+.. +.++++-.++.|++.-
T Consensus 434 -vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~-Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 434 -VPPSLRGWQENPERDSRLVKVAPKIKERMMKK-GTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred -CchHhccCcccchhhhHHHhhCcHHHHHHHhc-cceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 3332211 11 10000 00122344555665 43222212222 25789998876 6678888888877653
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.43 E-value=1.8e-05 Score=75.18 Aligned_cols=215 Identities=18% Similarity=0.156 Sum_probs=120.4
Q ss_pred CHHHHHhhhcc-----CCcEEEEcCC-CCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC-ccccccCC
Q 012095 217 DPKVLESKLTE-----KSRLLILCSP-SNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT-HTSFASLP 288 (471)
Q Consensus 217 d~e~l~~~l~~-----~~~~i~i~~p-~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~ 288 (471)
.++++++.|.+ .+.+-+|..| +.-.| .-.|++..+.|.+++++| ++..|+||+..+.-..|.- ....+.++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh-~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-GVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc-CeEEEeeeeecCCCccCceeeehhcCCC
Confidence 45666666642 3445555555 66666 578999999999999999 9999999999864332210 01112222
Q ss_pred CCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r 368 (471)
. . .-+-+|||-| ++| ||....+=.-..-.++...|- ..+.-...+.+++.. ..-+.+.+..+..-
T Consensus 333 ~--P--pD~vTFSKK~-q~g---Gffh~~~frpn~pYrifNTWm--GdP~k~lll~~vv~~-----I~~~~Ll~n~~~vG 397 (484)
T KOG1405|consen 333 S--P--PDVVTFSKKF-QTG---GFFHDEEFRPNEPYRIFNTWM--GDPSKNLLLEEVVQE-----IKREDLLNNVAHVG 397 (484)
T ss_pred C--C--ccceehhhhh-hcC---ccccCcccCCCchHHHhhhhc--CChHHHHHHHHHHHH-----HhHHHHHHHHHHHH
Confidence 1 1 2356799999 577 876543322222333333332 233222233333332 11233444445555
Q ss_pred HHHHHHhcCC----CC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE-
Q 012095 369 DFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI- 442 (471)
Q Consensus 369 ~~l~~~L~~~----~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi- 442 (471)
+.+..+|.++ || +.-....|.| +-.++|..- --..|+..+ +-+||-+.-+ | +..||+
T Consensus 398 ~~l~~gL~~Lq~~~p~~~~~~RGrGTF-~a~d~ps~~-----------~Rdk~i~~~-~~nGv~~GGC---g-~~siRfR 460 (484)
T KOG1405|consen 398 KALLKGLLELQAKYPGKINNLRGRGTF-IAWDCPSGS-----------IRDKLILIA-RLNGVNLGGC---G-DKSIRFR 460 (484)
T ss_pred HHHHHHHHHHHHhCchhhhcccccceE-EEEeCCChH-----------HHHHHHHHH-HHcCceeccc---c-cceeeec
Confidence 5666655543 44 3333445555 555887541 234555544 4458765332 2 234555
Q ss_pred -EeecCHHHHHHHHHHHHHHHHh
Q 012095 443 -SYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 443 -s~~~~~e~i~~~~~~l~~~l~~ 464 (471)
++.-.+...+-+++++.+.+.+
T Consensus 461 PsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 461 PSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred cceeehhhhHHHHHHHHHHHhcc
Confidence 5555778888899999888764
No 390
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.42 E-value=0.00025 Score=69.95 Aligned_cols=315 Identities=14% Similarity=0.103 Sum_probs=169.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCC--------CCCcEEEeCChHHHHHHHHHHh------cCCC-----------C-eEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSY--------TPDQILVSNGAKQSILQAVLAV------CSPG-----------D-EVI 183 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~--------~~~~i~it~G~~~al~~~~~~l------~~~g-----------d-~Vl 183 (471)
..+-..||..-+.+|+.+..+.|- +.--|+.++.+...+-.++.+- .+.+ + .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 445678999999999999887641 1224555555444444444332 1122 2 245
Q ss_pred EcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCC-c----EEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 012095 184 IPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKS-R----LLILCSPSNPTGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 184 v~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~-~----~i~i~~p~NPtG~~~~~~~l~~i~~l~~ 258 (471)
..+-++++....+...|.+.+.++.+. +|.++.+.|++++.++. + .+++.+. -|-.+..-+++.+|.-+|+
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~--GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL--GTTSSCAFDELEELGPVCR 262 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee--cCccccccccHHHhcchhh
Confidence 678899999999999999999999874 89999999999997532 2 2222222 2344556678999999999
Q ss_pred hCCCeEEEEccCCCccccCCCCccccccCC-CCCCceEEEecCCcccCccchhhee------------eEcCHHHHH-HH
Q 012095 259 KHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGY------------IAGPKHFVA-AC 324 (471)
Q Consensus 259 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~------------v~~~~~~i~-~l 324 (471)
++ ++|+.+|.+|.+-.+... .+..+. +...-.=+-...||.+ |.-+-+.- .-+++..++ ..
T Consensus 263 ~~-glWLHVDAAYAGsa~iCp---E~r~l~rGie~aDSfn~n~hK~~-~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~ 337 (511)
T KOG0628|consen 263 EE-GLWLHVDAAYAGSAFICP---EFRYLMRGIEYADSFNFNPHKWL-LVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAY 337 (511)
T ss_pred hc-CEEEEeehhhccccccCH---HHHHHhhcchhhccccCChhhee-EEeeeeecceeecCceeeeeeecChHhhcchh
Confidence 99 999999999996443221 111110 0000000111123433 22211111 111111111 00
Q ss_pred HHHH-hcccCCCChHHH--HHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-cceEEeEecCCcc
Q 012095 325 NKIQ-SQFTSGASSISQ--KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYY 400 (471)
Q Consensus 325 ~~~~-~~~~~~~~~~~q--~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~g~~~~~~~~~~~ 400 (471)
.... ..-.... +++. .+....+....+.-+-+++..++..+..+.+.+.+.+-+.+++..+. =|+ +.+++.+.
T Consensus 338 ~~~~~Dyrhwqi-pl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgL-vcFRlk~~- 414 (511)
T KOG0628|consen 338 QGSAPDYRHWQI-PLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGL-VCFRLKGD- 414 (511)
T ss_pred hccCCCcccccc-ccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccce-eEEeecCC-
Confidence 0000 0000000 0010 00111111000011222222333333334444444443456665443 344 55566532
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhC
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l~~~~ 466 (471)
....+.|..++-....|.+.|.. +...-.+|++++. ++++++++...|.+...++.
T Consensus 415 ---------N~~ne~Ll~~in~~g~i~l~~~~-l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 415 ---------NEINEALLNRLNSSGRIHLVPAS-LHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred ---------cHHHHHHHHHHHhcCcEEEEEee-ecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 12567888888777789888865 2223468999986 77899999999988877643
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.76 E-value=0.0078 Score=56.60 Aligned_cols=336 Identities=12% Similarity=0.092 Sum_probs=186.9
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc--CCCCCCCCC-------CCHHHHHHHHHHHHHHhCCCCCCCcEEEeC
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE--GFTRYTPNA-------GTLELRSAICHKLKEENGLSYTPDQILVSN 162 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~--~~~~Y~~~~-------G~~~lr~~ia~~~~~~~g~~~~~~~i~it~ 162 (471)
.+.++.|.|+.|...+. |....+.+.+.++. ....|+... +.......++.. -| ...++|.+.|
T Consensus 63 ~~d~~~iYlcGNSLGLm-PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~i----VG--A~e~EvavmN 135 (465)
T KOG3846|consen 63 SDDKPVIYLCGNSLGLM-PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPI----VG--AQENEVAVMN 135 (465)
T ss_pred CCCCCeEEEeccccccC-chhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhh----cc--CCchhhhhHh
Confidence 45678899998887764 44444444444332 122233222 223333334444 34 3678999999
Q ss_pred ChHHHHHHHHHHhcCCC---CeEEEcCCCCCChH----HHHHHcCCEEE--EecCCC-CCCCcCCHHHHHhhhccC---C
Q 012095 163 GAKQSILQAVLAVCSPG---DEVIIPAPFWVSYP----EMARIADATPV--ILPTRI-SENFLLDPKVLESKLTEK---S 229 (471)
Q Consensus 163 G~~~al~~~~~~l~~~g---d~Vlv~~p~y~~~~----~~~~~~G~~~~--~v~~~~-~~~~~ld~e~l~~~l~~~---~ 229 (471)
+-+..+..++..+.+|- -.|+++.-.|++-. ..+++.|..+. .+-+.+ ++.-.+..+++.+.|..+ .
T Consensus 136 sLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDei 215 (465)
T KOG3846|consen 136 SLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEI 215 (465)
T ss_pred hhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeE
Confidence 99999999999998774 35888888887633 45677776542 111111 233346778888877543 3
Q ss_pred cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-
Q 012095 230 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG- 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G- 308 (471)
.+|+++..+.-||+.++ +.+|- .+.+.+|++|=.|-++.. +. .++ .+ .+|+..+.+..--|.+. +|
T Consensus 216 A~v~fSGvqyYTGQ~Fd---i~aIT-~Agq~kgc~VGfDLAHAv----gN--VpL-~L-HdWgVDFACWCSYKYln-aGa 282 (465)
T KOG3846|consen 216 ALVCFSGVQYYTGQYFD---IGAIT-FAGQFKGCLVGFDLAHAV----GN--VPL-QL-HDWGVDFACWCSYKYLN-AGA 282 (465)
T ss_pred EEEEeecceeecccccc---hhhhh-hcccCCCcEechhhhhhh----cC--Cce-EE-eecCCceEEEeeecccc-cCC
Confidence 34556778999999999 77777 444445999999988874 11 111 11 12555566666667663 22
Q ss_pred hhheeeEcCHHH----HHHHHH---------------------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 309 WRLGYIAGPKHF----VAACNK---------------------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 309 ~R~G~v~~~~~~----i~~l~~---------------------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
-.+|-+...+.. ..++.. ....-.++|+.+...+....|+.- .+--+++++.+
T Consensus 283 GgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F--~q~~~~~lRkr 360 (465)
T KOG3846|consen 283 GGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELF--AQFNINELRKR 360 (465)
T ss_pred CccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHH--HHhhHHHHhhh
Confidence 123333333222 122211 111123456666666666655531 12223344333
Q ss_pred HHHHHHHHHHHhcCCCCC-----------eeeCCC----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEE
Q 012095 364 FRERRDFLVKSFGELEGV-----------KMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 428 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~-----------~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v 428 (471)
---...++...++...|. .+..|. .|--+.+.+.. +...++.+|-++ ||..
T Consensus 361 S~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss-------------p~~~vfqeL~kr-Gv~~ 426 (465)
T KOG3846|consen 361 SLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS-------------PTPKVFQELHKR-GVIG 426 (465)
T ss_pred hhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC-------------CchHHHHHHHHc-Ceec
Confidence 222222222222221122 122221 12223333321 345788887665 8875
Q ss_pred ECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhCC
Q 012095 429 VPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 429 ~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l~~~~~ 467 (471)
-. ..++.||++... +-.++..+++.|.+++..+.+
T Consensus 427 Dk----R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846|consen 427 DK----RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred cc----cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhhc
Confidence 33 246789999876 778999999999999877654
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.57 E-value=0.018 Score=59.46 Aligned_cols=300 Identities=17% Similarity=0.192 Sum_probs=166.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEe--CChH---HHHHHHHHHh-cCCC----CeEEEcCCCCCChHHHHHHcCC
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVS--NGAK---QSILQAVLAV-CSPG----DEVIIPAPFWVSYPEMARIADA 201 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it--~G~~---~al~~~~~~l-~~~g----d~Vlv~~p~y~~~~~~~~~~G~ 201 (471)
+|+.++-+.+.+.+-...|. +++.+- +|+. .+|. ++++. ...| ...++|.-.+......+..+|.
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL~-~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGLR-VIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred hhHHHHHHHHHHHhheeecc----cceeecCCCCcccchhhHH-HHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 78888888888888655442 455443 2322 2344 44443 3344 3467888888888888999999
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP 278 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~ 278 (471)
+++.|.++..+ .+|..+|+++..+ +-.++.|..|+. .|+ + ++.+++++++.++| +--|..|.+--.-..+
T Consensus 653 kvvpV~~~~~G--~id~~dLk~kaekh~~~Laa~MvTYPST-~Gv-f-E~~i~d~cd~iHeh-GGQVYlDGANMNAqVG- 725 (1001)
T KOG2040|consen 653 KVVPVGCDANG--NIDMVDLKAKAEKHKDNLAALMVTYPST-HGV-F-EEGIDDICDIIHEH-GGQVYLDGANMNAQVG- 725 (1001)
T ss_pred EEEEeeccCCC--CccHHHHHHHHHHhhhhhheeEEecccc-ccc-c-cccHHHHHHHHHhc-CCEEEecCCCccceec-
Confidence 99999987544 5999999987754 345777877763 232 2 23499999999999 8899999775421111
Q ss_pred CCccccccCCCCCCceEEEecCCcccCcc----chhheeeEcCHHHHHHHHHH--H----------------hcccCCCC
Q 012095 279 ATHTSFASLPGMWERTLTVNGFSKAFAMT----GWRLGYIAGPKHFVAACNKI--Q----------------SQFTSGAS 336 (471)
Q Consensus 279 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~~----G~R~G~v~~~~~~i~~l~~~--~----------------~~~~~~~~ 336 (471)
.. -+++.+..+.=--+.|+|.+| |-.+|=+...+.++..+-.. . .++.+..-
T Consensus 726 --lc----~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~I 799 (1001)
T KOG2040|consen 726 --LC----RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALI 799 (1001)
T ss_pred --cc----CCccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCccee
Confidence 00 112222223333466777443 33344444444444433110 0 01111111
Q ss_pred hHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc--ceEEeEecCCccCCcccCCCCCCCHH
Q 012095 337 SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG--AFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 337 ~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~--g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
.+..++-.+.+. ...+.+.-+.-.-+.++|.++|+..-.+-+..+.+ +.=+.+++.+... .++ ..+.
T Consensus 800 LpISwaYikmMG-----~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~--~ag----ieav 868 (1001)
T KOG2040|consen 800 LPISWAYIKMMG-----SGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKK--TAG----IEAV 868 (1001)
T ss_pred ehhHHHHHHHhc-----ccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhcc--ccC----CcHH
Confidence 111122222222 12233333334456778888888752232222332 1112345543310 111 3678
Q ss_pred HHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
+++++|.+ +|....--+ |-..+.+-|-... +.++++++++++-.+-
T Consensus 869 DvAKRL~D-YgFHaPTms-wPV~gtLMIEPTESE~k~ElDRfcdAliSIr 916 (1001)
T KOG2040|consen 869 DVAKRLMD-YGFHAPTMS-WPVAGTLMIEPTESEDKAELDRFCDALISIR 916 (1001)
T ss_pred HHHHHHHh-ccCCCCccc-cccCCceEeccCccccHHHHHHHHHHHHHHH
Confidence 99999875 576543333 3345777776665 5578888888775543
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.32 E-value=0.0016 Score=59.73 Aligned_cols=301 Identities=17% Similarity=0.190 Sum_probs=147.8
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhc--CCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCcCCHHHHHh
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVC--SPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLES 223 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~--~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~-~~~ld~e~l~~ 223 (471)
..|...-.+.+++--.+-..+.+.+..+- +|. ..|+-+.-.-.+....+-.+|.+++.+.--.++ ...-|++.+++
T Consensus 69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~ 148 (432)
T KOG3843|consen 69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA 148 (432)
T ss_pred HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence 34554334444443222233444555553 344 445544433334444556789998777543332 33448888888
Q ss_pred hhcc-CCcEE-EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCC
Q 012095 224 KLTE-KSRLL-ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 224 ~l~~-~~~~i-~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
.+.+ ....| ++-+... .=..-+++.+++|+.+|..| |+.-|+..+|+.-. .. .-.-+..-.....-.-++.|+-
T Consensus 149 ~iee~g~dcilci~stts-cfapr~pd~leaiaaica~~-diphivnnayglqs-ee-~i~~iaa~~~~grida~vqsld 224 (432)
T KOG3843|consen 149 IIEELGEDCILCIHSTTS-CFAPRSPDNLEAIAAICAAH-DIPHIVNNAYGLQS-EE-CIHKIAAAAECGRIDAFVQSLD 224 (432)
T ss_pred HHHHhCCceEEEEeeccc-ccCCCCCchHHHHHHHHHcc-Cchhhhccccccch-HH-HHHHHHHHhhhccHHHHHHHhh
Confidence 8865 33433 3422211 11234677899999999999 99999999997411 10 0000011011112235688999
Q ss_pred cccCccchhheeeE--cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC-ChHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 302 KAFAMTGWRLGYIA--GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA-GGEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 302 K~~g~~G~R~G~v~--~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~-~~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
|.|-+|= -|.++ ..+.+++.+.+....-.+..++.. .....|..+.. ..+.+.+..+-+-+.|+.+...-+.+
T Consensus 225 knf~vpv--ggaiia~fk~n~iq~iak~ypgrasa~ps~d--llitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~ 300 (432)
T KOG3843|consen 225 KNFMVPV--GGAIIAAFKDNFIQEIAKMYPGRASASPSLD--LLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAI 300 (432)
T ss_pred hcceeec--chhHhhHhHHHHHHHHHHhCCCccccCccHH--HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9995331 14444 366788877765433333344443 44444443211 11223334444444444444433333
Q ss_pred CCCeeeCCCcceEE--eE-ecCCccCCcccCCCCCCCHH-HHHHHHHHc--CCEEEECCCC------------CCCC---
Q 012095 379 EGVKMSEPQGAFYL--FI-DFSTYYGSEAEGFGKIENSE-SLCRYLLDK--AQVALVPGDA------------FGDD--- 437 (471)
Q Consensus 379 ~g~~~~~p~~g~~~--~~-~~~~~~~~~~~~~~~~~~~~-~l~~~Ll~~--~gV~v~pg~~------------f~~~--- 437 (471)
...-+..|+..+-+ .+ .+++.. ..+. .|-..|+.+ .|-.|+|.+. |+..
T Consensus 301 ~e~l~~~p~n~is~amtl~ti~~~k----------~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e 370 (432)
T KOG3843|consen 301 GECLLETPENEISLAMTLKTIDEAK----------DKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNE 370 (432)
T ss_pred hhhhhcCCCchhhhhhhhccCChHH----------hhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCc
Confidence 11222234332221 11 222210 0122 233445554 1334555332 2211
Q ss_pred ---CcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 438 ---TCIRISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 438 ---~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+|+-++.+ -+..++++++.||.+.+..++
T Consensus 371 ~~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ 404 (432)
T KOG3843|consen 371 QHCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFR 404 (432)
T ss_pred CchhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHH
Confidence 24444433 377899999999988876554
No 394
>PLN02672 methionine S-methyltransferase
Probab=97.31 E-value=0.0066 Score=67.91 Aligned_cols=213 Identities=14% Similarity=0.183 Sum_probs=135.9
Q ss_pred HHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh------cCCCCeEEEc
Q 012095 113 IAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV------CSPGDEVIIP 185 (471)
Q Consensus 113 v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l------~~~gd~Vlv~ 185 (471)
+...+...+.+ ...-|.|+.|...+|..|+.++...++++++++||++.++-..++..+++.+ ++.+.+-.+|
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1082)
T PLN02672 406 FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP 485 (1082)
T ss_pred HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC
Confidence 44555555554 3466889999999999999999999999999999999999999997777654 4455443333
Q ss_pred CCCCCChHHHHHHcC----------CEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 186 APFWVSYPEMARIAD----------ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G----------~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
. .| .......| ++++.-|. .-+.+.+.+++ ++++++..--+ +-..+-...+.|.
T Consensus 486 ~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 550 (1082)
T PLN02672 486 K-KW---LTSLAIENATSDSKSDDVITVIEAPR--------QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLL 550 (1082)
T ss_pred H-HH---HhHhhhhcccccCccCCeEEEEeCCC--------cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHH
Confidence 2 22 22222222 22332222 11234444432 67877743222 2233455688999
Q ss_pred HHHHhCCCeEEEEccC-CCccccCCCCccccccCC--CCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhc
Q 012095 255 RIVAKHPRLLVLSDEI-YEHIIYAPATHTSFASLP--GMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 330 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~-y~~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~ 330 (471)
+.+++. |.+++.|.. |.++...+....-+..+. ....+..++.++-|.--.+.+-+.+++. ++.+...+.+....
T Consensus 551 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1082)
T PLN02672 551 NVTAEI-GARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEV 629 (1082)
T ss_pred HHHHhh-CcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHh
Confidence 999999 999999987 555554333332222221 1234556777788877668899999885 55677777766655
Q ss_pred ccCCCChHHHH
Q 012095 331 FTSGASSISQK 341 (471)
Q Consensus 331 ~~~~~~~~~q~ 341 (471)
.......++|.
T Consensus 630 ~~~~~~~~~~~ 640 (1082)
T PLN02672 630 LEGRTAIISQF 640 (1082)
T ss_pred hccchHHHHHH
Confidence 55556666664
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.95 E-value=0.12 Score=53.68 Aligned_cols=313 Identities=15% Similarity=0.205 Sum_probs=161.1
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCC-----CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYTPNA-----GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 100 l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~-----G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.+.|.-....|+.+.+.+.+.. ...++|+|.+ |-.|-.--....+....|.++.. .-++--|+..+-..++..
T Consensus 123 IGmGYyn~~vP~~I~RNilenp-~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aN-ASLLDEgTAaaEAm~l~~ 200 (1001)
T KOG2040|consen 123 IGMGYYNTHVPAVILRNILENP-GWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMAN-ASLLDEGTAAAEAMALCN 200 (1001)
T ss_pred hccccccccCcHHHHHHhhhCC-cceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccc-hhhhccchhHHHHHHHHH
Confidence 3445444445776665554421 1247787753 22111111112223334655432 222333333222222222
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
-..++...++..-+|+.....++.. +..+. +.+ .|+++...- .++...+++-.|.- -|.+.+ ..+
T Consensus 201 ~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~-v~~-------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d---~~e 267 (1001)
T KOG2040|consen 201 RINKRKKFVVDSNCHPQTLSVVKTRAKGFGIK-VVV-------SDIKEADYS-SKDVSGVLVQYPDT-EGSVLD---FDE 267 (1001)
T ss_pred hhcccceEEecCCCCcchhhhhhcccccccee-EEe-------cCHHHhhcc-ccceeEEEEEcCCC-CCcccC---HHH
Confidence 2456677999999999988876532 22211 111 133333221 23455666666654 688888 777
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec---CCcccCccchhheeeEcCHHHHHHH-----
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG---FSKAFAMTGWRLGYIAGPKHFVAAC----- 324 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S---~SK~~g~~G~R~G~v~~~~~~i~~l----- 324 (471)
+++.+++. +.++++-- ++ -...+..-++.++-.|.++| |.--+|-.|--.||..+.+++.+.+
T Consensus 268 l~~~a~~~-~s~vv~at---DL-----LaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRii 338 (1001)
T KOG2040|consen 268 LVELAHAN-GSLVVMAT---DL-----LALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRII 338 (1001)
T ss_pred HHHHhhcc-CceEEEee---hh-----hHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceE
Confidence 88888887 66655321 11 01122333445666788887 3333443344444544444444322
Q ss_pred ----------------H----HHHh-cccCCCChHHHH-----HHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 325 ----------------N----KIQS-QFTSGASSISQK-----AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 325 ----------------~----~~~~-~~~~~~~~~~q~-----aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
+ .+++ -.+++..+ +|+ ++..++-. ....++++.++.....-++..+|++.
T Consensus 339 GvtkD~~gk~a~RLALQTREQHIrRDKATSNICT-AQALLANmaAmyaiYH---Gp~gL~~IArrvh~~T~~l~~~l~~a 414 (1001)
T KOG2040|consen 339 GVTKDALGKEAYRLALQTREQHIRRDKATSNICT-AQALLANMAAMYAIYH---GPHGLKEIARRVHNLTLILAEGLKNA 414 (1001)
T ss_pred eeeecccccHHHHHHHHHHHHHhhhhccchhhhH-HHHHHHHHHHHHhhhc---CcHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1 1111 11221211 221 12222222 35668888888888888899999876
Q ss_pred CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHH
Q 012095 379 EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 379 ~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~ 456 (471)
|-++.. -.||=.+++.-. .+.+++.++..++ +|-++- ..++.+-+++.. +++|++..+.
T Consensus 415 -ghel~~--k~fFDTLkI~~~-----------~s~~~~l~rA~~~-~iNlr~----~ed~tigvslDETv~~~DvddLl~ 475 (1001)
T KOG2040|consen 415 -GHELQH--KPFFDTLKIRCG-----------CSAEEVLDRAAKR-QINLRL----VEDGTIGVSLDETVTEKDVDDLLW 475 (1001)
T ss_pred -chhhcc--ccccceEEEEec-----------CcHHHHHHHHHhh-cCceEE----eecCceEEeecccccHHHHHHHHH
Confidence 655442 237755555321 1567788777665 454332 135678888876 7788888887
Q ss_pred HHH
Q 012095 457 RIK 459 (471)
Q Consensus 457 ~l~ 459 (471)
.+.
T Consensus 476 vf~ 478 (1001)
T KOG2040|consen 476 VFN 478 (1001)
T ss_pred HHc
Confidence 764
No 396
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.46 E-value=0.31 Score=45.68 Aligned_cols=330 Identities=12% Similarity=0.107 Sum_probs=177.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCC-------CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFT-------RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~-------~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
..+++|+.|---+ |..+...+.+-+-+ ... ...+ .-...+.+.-...+.+.+.+|-+-+=+++-.|++.
T Consensus 6 ~~vvnFaaGPAkl--p~~VL~e~qkdl~n~~g~GisV~EmSHRs-k~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790|consen 6 ERVVNFAAGPAKL--PESVLLEAQKDLLNFNGSGISVMEMSHRS-KDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred cceeecCCCcccC--CHHHHHHHHHHhhccCCCcceEEEecccc-hhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcc
Confidence 3578888876444 44444444433322 100 1111 11234445555566666776533334455566777
Q ss_pred HHHHHHHHhc--CCC---CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 167 SILQAVLAVC--SPG---DEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 167 al~~~~~~l~--~~g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~-~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
-+..+...|+ +-| |.|+.-..+--.+.++-+..-...+..+..... +--+|.+.++. +++.+.+++|.----
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETV 160 (370)
T KOG2790|consen 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETV 160 (370)
T ss_pred cccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEecCcee
Confidence 7776666665 334 677766555555556555544445555543322 11245555543 345567777654334
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
-|+-++.-- +-.-+ +.+++.|-.-..+. .+..+.. .-+++..--|.+|.+| +-.++..+++
T Consensus 161 HGVEf~~~P------~~~~~-~~vlVaDmSSnflS----rpvDvsk------~gvi~aGAQKN~G~aG--~Tvvivr~dl 221 (370)
T KOG2790|consen 161 HGVEFDFIP------VNDPK-GAVLVADMSSNFLS----RPVDVSK------FGVIFAGAQKNVGPAG--VTVVIVRKDL 221 (370)
T ss_pred eceecCCCC------CCCCC-CceEEEecccchhc----CCccchh------cceEEeccccccCccc--cEEEEEehhh
Confidence 465554110 11123 78888886654432 1122222 2266777889999777 4445667777
Q ss_pred HHHHHHHH------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee--CC
Q 012095 321 VAACNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS--EP 386 (471)
Q Consensus 321 i~~l~~~~------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~--~p 386 (471)
+.....+. ....-++|.++.+++--.++.-. ....+..+.+.-.+..+.+++.+.+..|+-.. .|
T Consensus 222 lg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il-~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~ 300 (370)
T KOG2790|consen 222 LGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWIL-EKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEP 300 (370)
T ss_pred hcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHH-hcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccch
Confidence 66543221 11122356666555444443210 12336667777788899999999886564322 22
Q ss_pred --CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 387 --QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 387 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
.+-|-+.+++.+. ....+|.+...++ +..-.-|. ..-|.+|-|+-. +-++.++++.-++++.
T Consensus 301 ~~RS~MNV~Fri~~d-----------~Le~eFLkeA~~~-~mv~LKGh--RSVGGiRASlYNAisv~~~q~L~~~m~~F~ 366 (370)
T KOG2790|consen 301 SVRSRMNVPFRIEKD-----------ELEAEFLKEAAKE-HMVQLKGH--RSVGGIRASLYNAISVEEVQKLAAFMKEFQ 366 (370)
T ss_pred hhhhhcccceeecch-----------HHHHHHHHHHHHh-hhhccccc--cccccchhhhhccccHHHHHHHHHHHHHHH
Confidence 2335455566432 2456677766666 34333332 234679999876 8888888888777765
Q ss_pred H
Q 012095 463 L 463 (471)
Q Consensus 463 ~ 463 (471)
+
T Consensus 367 k 367 (370)
T KOG2790|consen 367 K 367 (370)
T ss_pred H
Confidence 4
No 397
>PLN02591 tryptophan synthase
Probab=88.81 E-value=21 Score=33.60 Aligned_cols=166 Identities=16% Similarity=0.138 Sum_probs=100.9
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+.+..+.+.|-++|-|+.=..+.-. -|.+.++-.+++.++.+ .....+.+.+.- +....+ =|++|--
T Consensus 20 ~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~-------~~~~~~~~~~~r-~~~~~p----~ilm~Y~ 87 (250)
T PLN02591 20 EALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTT-------LDSVISMLKEVA-PQLSCP----IVLFTYY 87 (250)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHh-cCCCCC----EEEEecc
Confidence 3455566788888877665543222 36788888888876432 133444443322 111211 1333321
Q ss_pred h---HHHHHHHHHHhcCCC-CeEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 A---KQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~---~~al~~~~~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
. .-++...+..+.+-| |.|++++-.+. .+...++..|...+.+-.. + .+.+.+++........||+.+
T Consensus 88 N~i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P--t---t~~~ri~~ia~~~~gFIY~Vs 162 (250)
T PLN02591 88 NPILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP--T---TPTERMKAIAEASEGFVYLVS 162 (250)
T ss_pred cHHHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CCHHHHHHHHHhCCCcEEEee
Confidence 1 234555666666777 89999986654 2345667888887665422 1 355677777666677888766
Q ss_pred CCCCcccCCC-HHHHHHHHHHHHhCCCeEEEE
Q 012095 237 PSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 237 p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~ 267 (471)
-..-||..-. .+.++++++.++++.++.|++
T Consensus 163 ~~GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 163 STGVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CCCCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 6667886433 566888888888876787775
No 398
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=86.00 E-value=32 Score=32.60 Aligned_cols=166 Identities=22% Similarity=0.193 Sum_probs=96.9
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+....+.+.|-++|-++.=..+.-. -|.+.+|..+++.++.+ ...+-+.+.+.-.+... --+++.+=
T Consensus 28 ~~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G~~-------~~~~~~~~~~ir~~~~~-----~pivlm~Y 95 (259)
T PF00290_consen 28 EILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNGFT-------LEKIFELVKEIRKKEPD-----IPIVLMTY 95 (259)
T ss_dssp HHHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT---------HHHHHHHHHHHHHHCTS-----SEEEEEE-
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-------HHHHHHHHHHHhccCCC-----CCEEEEee
Confidence 4455666778888777654433222 36788888888876432 23444444443212111 23433332
Q ss_pred hH----HHHHHHHHHhcCCC-CeEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc
Q 012095 164 AK----QSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 164 ~~----~al~~~~~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
.. -++...+..+.+-| |.|++|+--+.. +...++..|..++.+=.. + -..+.+++........||+.
T Consensus 96 ~N~i~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p--~---t~~~Ri~~i~~~a~gFiY~v 170 (259)
T PF00290_consen 96 YNPIFQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAP--T---TPEERIKKIAKQASGFIYLV 170 (259)
T ss_dssp HHHHHHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET--T---S-HHHHHHHHHH-SSEEEEE
T ss_pred ccHHhccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHhCCcEEEee
Confidence 22 23334444444556 899999966643 345667889887665432 2 26677777766667888887
Q ss_pred CCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEE
Q 012095 236 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 236 ~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~ 267 (471)
+-...||.--. ..++++.++.++++.++.|++
T Consensus 171 s~~GvTG~~~~~~~~l~~~i~~ik~~~~~Pv~v 203 (259)
T PF00290_consen 171 SRMGVTGSRTELPDELKEFIKRIKKHTDLPVAV 203 (259)
T ss_dssp SSSSSSSTTSSCHHHHHHHHHHHHHTTSS-EEE
T ss_pred ccCCCCCCcccchHHHHHHHHHHHhhcCcceEE
Confidence 77778997543 467899999999885677764
No 399
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=85.18 E-value=7.8 Score=35.39 Aligned_cols=99 Identities=20% Similarity=0.246 Sum_probs=67.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEE----E-c-CC-CCC----C---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVI----I-P-AP-FWV----S---YPEMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vl----v-~-~p-~y~----~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
-+.+-+|+....+++..++ +.|-.|. + | ++ +|. + ....++..|..++......+ ..-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 3677889999988666554 4553322 1 1 12 111 1 22456788999888876542 224678888
Q ss_pred hhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 223 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 223 ~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+++.. +...|+ +|.+++..++..+-.+|++. ++.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~l-Gl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEEL-GLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHh-CCEEe
Confidence 87754 445666 79999999999999999998 88766
No 400
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=83.54 E-value=41 Score=31.92 Aligned_cols=167 Identities=14% Similarity=0.167 Sum_probs=98.8
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+.+..+.+.|-++|-|+.=..+.-. -|.+.+|..+++.++.+ ...+.+.+.+. .+....+ =+++|--
T Consensus 33 ~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~-------~~~~~~~~~~~-r~~~~~p----~vlm~Y~ 100 (263)
T CHL00200 33 KALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGIN-------LNKILSILSEV-NGEIKAP----IVIFTYY 100 (263)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHH-hcCCCCC----EEEEecc
Confidence 3455666788888777655433222 36788888888876432 13333434333 1112222 1333322
Q ss_pred h---HHHHHHHHHHhcCCC-CeEEEcCCCCCCh---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 A---KQSILQAVLAVCSPG-DEVIIPAPFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
. .-++...+..+.+.| |.|++++-.+... ...++..|..++.+=.. + -+.+.++...+.....||+.+
T Consensus 101 N~i~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~P--t---T~~eri~~i~~~a~gFIY~vS 175 (263)
T CHL00200 101 NPVLHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAP--T---SSKSRIQKIARAAPGCIYLVS 175 (263)
T ss_pred cHHHHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECC--C---CCHHHHHHHHHhCCCcEEEEc
Confidence 1 223444566666677 8999998665443 35667889887665432 2 256777776665555788766
Q ss_pred CCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEc
Q 012095 237 PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 237 p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
-...||..- -.+.++++++.++++.+..|.+|
T Consensus 176 ~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~vG 208 (263)
T CHL00200 176 TTGVTGLKTELDKKLKKLIETIKKMTNKPIILG 208 (263)
T ss_pred CCCCCCCCccccHHHHHHHHHHHHhcCCCEEEE
Confidence 556788742 23557888888887757777765
No 401
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=75.23 E-value=76 Score=30.05 Aligned_cols=167 Identities=18% Similarity=0.180 Sum_probs=88.8
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+.+..+.+.|-++|-|+.=..+.-. -|.+.++-.+++.++.+ ...+-+.+.+.-.+....+ =+++|--
T Consensus 30 ~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~~AL~~G~~-------~~~~~~~~~~~r~~~~~~p----~vlm~Y~ 98 (258)
T PRK13111 30 EIIKALVEAGADIIELGIPFSDPVADGPVIQAASLRALAAGVT-------LADVFELVREIREKDPTIP----IVLMTYY 98 (258)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHhcCCCCC----EEEEecc
Confidence 3455566778788776654433222 36777888888876432 1233333333221111221 1333321
Q ss_pred h---HHHHHHHHHHhcCCC-CeEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 A---KQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
. ..++...+..+.+-| |.|++++-.+.. +...++..|...+.+=.. + ...+.++.........||+.+
T Consensus 99 N~i~~~G~e~f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap--~---t~~eri~~i~~~s~gfIY~vs 173 (258)
T PRK13111 99 NPIFQYGVERFAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAP--T---TTDERLKKIASHASGFVYYVS 173 (258)
T ss_pred cHHhhcCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCC--C---CCHHHHHHHHHhCCCcEEEEe
Confidence 1 123444555565667 889998865542 334456778887663211 1 244666665555566777644
Q ss_pred CCCCcccC-CCHHHHHHHHHHHHhCCCeEEEE
Q 012095 237 PSNPTGSV-YPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 237 p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
-.--||.. -..+.+.+.++.++++.++.|++
T Consensus 174 ~~GvTG~~~~~~~~~~~~i~~vk~~~~~pv~v 205 (258)
T PRK13111 174 RAGVTGARSADAADLAELVARLKAHTDLPVAV 205 (258)
T ss_pred CCCCCCcccCCCccHHHHHHHHHhcCCCcEEE
Confidence 44447762 22234666666666654666664
No 402
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=74.52 E-value=32 Score=33.18 Aligned_cols=106 Identities=19% Similarity=0.227 Sum_probs=53.6
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCCCc-EEEeCChHHHHHHHHHHhcCCC-CeE-EEcCCCCCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPG-DEV-IIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~~~-i~it~G~~~al~~~~~~l~~~g-d~V-lv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.|.-.-|-++.-..... .| .+.+.. |+=.++++-++.+++-+-. .| ..+ ++|+..-.....+++.+|++++.+|
T Consensus 38 ~gSvKDR~A~~mI~~Ae~~G-~l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~ 115 (300)
T COG0031 38 GGSVKDRIALYMIEDAEKRG-LLKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVILTP 115 (300)
T ss_pred CCchhHHHHHHHHHHHHHcC-CCCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcC
Confidence 34444444443333322 33 356654 4434555556665554433 34 333 3444333445678999999999998
Q ss_pred CCCCCCCcCCHHHHHhhhccCCc-EEEEcCCCCC
Q 012095 208 TRISENFLLDPKVLESKLTEKSR-LLILCSPSNP 240 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~-~i~i~~p~NP 240 (471)
-.+ +...=-.+.+++...+.+. +++.+...||
T Consensus 116 ~~~-g~~~~a~~~a~el~~~~p~~~~~~~Qf~Np 148 (300)
T COG0031 116 GAP-GNMKGAIERAKELAAEIPGYAVWLNQFENP 148 (300)
T ss_pred CCC-CchHHHHHHHHHHHHhCCCceEchhhcCCC
Confidence 622 2111123333444455555 6766444443
No 403
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=72.71 E-value=46 Score=32.02 Aligned_cols=73 Identities=12% Similarity=0.244 Sum_probs=49.0
Q ss_pred EEEcCCCCCChHHHHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh
Q 012095 182 VIIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK 259 (471)
Q Consensus 182 Vlv~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~ 259 (471)
-+..-|+|++..++... -..-++.+|.. .-++.+++....+.|.+++.+..- +..+-++|.++|++
T Consensus 45 ~v~G~~~y~sv~dlp~~~~~Dlavi~vpa~------~v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~ 112 (286)
T TIGR01019 45 TVLGLPVFDSVKEAVEETGANASVIFVPAP------FAADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEE 112 (286)
T ss_pred eecCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHH
Confidence 33455678887777665 34455555532 367788888888888777654432 33345789999999
Q ss_pred CCCeEEEE
Q 012095 260 HPRLLVLS 267 (471)
Q Consensus 260 ~~~~~ii~ 267 (471)
+ ++.|+=
T Consensus 113 ~-girilG 119 (286)
T TIGR01019 113 S-GTRLIG 119 (286)
T ss_pred c-CCEEEC
Confidence 9 999983
No 404
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=71.17 E-value=29 Score=33.33 Aligned_cols=101 Identities=9% Similarity=0.045 Sum_probs=58.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+..+-+++|.|+...-..+..-+.+.|-.+++-+-.=.+.. ..++..| ++..+-+|-.+. =++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 45566777777777667777778888876655443333333 3334345 666666654221 133333344433
Q ss_pred CCcEEEEcCCC---CCcccCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPS---NPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~---NPtG~~~~~~~l~~i~~l 256 (471)
+.--|++||.. .-....++++++++..++
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 34456777763 233455788888877665
No 405
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=69.48 E-value=24 Score=32.40 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=52.7
Q ss_pred EEeCC-hHHHHHHHHHHhcCCCCeE-EEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 159 LVSNG-AKQSILQAVLAVCSPGDEV-IIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 159 ~it~G-~~~al~~~~~~l~~~gd~V-lv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
+++.+ |..+- .++..|+..+-.| ++..+.-......++..|++++..+++ |.+.|.++++ +...++++.
T Consensus 2 ~V~GatG~~G~-~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-------~~~~l~~al~-g~d~v~~~~ 72 (233)
T PF05368_consen 2 LVTGATGNQGR-SVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-------DPESLVAALK-GVDAVFSVT 72 (233)
T ss_dssp EEETTTSHHHH-HHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT--------HHHHHHHHT-TCSEEEEES
T ss_pred EEECCccHHHH-HHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-------CHHHHHHHHc-CCceEEeec
Confidence 44433 33333 3566666666443 334443112234456789998866542 8899999997 455555554
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
+.+. ....+.-..+++.|++. ++-.
T Consensus 73 ~~~~---~~~~~~~~~li~Aa~~a-gVk~ 97 (233)
T PF05368_consen 73 PPSH---PSELEQQKNLIDAAKAA-GVKH 97 (233)
T ss_dssp SCSC---CCHHHHHHHHHHHHHHH-T-SE
T ss_pred Ccch---hhhhhhhhhHHHhhhcc-ccce
Confidence 4332 23445677888989887 6533
No 406
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=66.83 E-value=64 Score=29.78 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=65.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEE----cCC--CCC-------ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVII----PAP--FWV-------SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vlv----~~p--~y~-------~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++..+|+..+..++.++.-+ .+.+.+ +.. +|. -...+++..|..++.++..... .--.+.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~--e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTE--EDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCc--cHHHHHHHHH
Confidence 56779999999988887766 543322 221 121 1124577889887776643221 1244566666
Q ss_pred hcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 225 l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+ +...++ +|.+.+...+..+-++|.+. |+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~l-gl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCREL-GLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhc-CCEEe
Confidence 644 556666 79999999999999999998 87766
No 407
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=66.67 E-value=55 Score=31.81 Aligned_cols=55 Identities=25% Similarity=0.312 Sum_probs=34.7
Q ss_pred CCcCCHHHHHhhhcc-----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 213 NFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 213 ~~~ld~e~l~~~l~~-----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
+..++.++++..++. ....+++-+.+=|-|. +.+...+|+++|++. +..+++|-.
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~--~~d~y~~li~~~~~~-g~~vilD~S 167 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGV--PPDAYAELIRILRQQ-GAKVILDTS 167 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCC--CHHHHHHHHHHHHhc-CCeEEEECC
Confidence 344666666654432 1223344445555554 677889999999998 899998854
No 408
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=66.17 E-value=1.2e+02 Score=28.64 Aligned_cols=169 Identities=17% Similarity=0.173 Sum_probs=90.4
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+.+..+.+.|-++|-|+.=..+.-. -|.+.++..+++.++.+ ...+.+.+.+.-+.....++ ......|-
T Consensus 28 ~~~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G~~-------~~~~~~~v~~ir~~~~~~pl--v~m~Y~Np 98 (256)
T TIGR00262 28 EIIKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAGMT-------PEKCFELLKKVRQKHPNIPI--GLLTYYNL 98 (256)
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcCCC-------HHHHHHHHHHHHhcCCCCCE--EEEEeccH
Confidence 3345566788888877665433222 36788888888876432 12333333332111122221 22222332
Q ss_pred -hHHHHHHHHHHhcCCC-CeEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 164 -AKQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 164 -~~~al~~~~~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
-.-++...+..+.+.| |.|++++-.+.. +...++..|..++.+=. + . -+.+.++.........|++.+-+
T Consensus 99 i~~~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv~-P-~---T~~eri~~i~~~~~gfiy~vs~~ 173 (256)
T TIGR00262 99 IFRKGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLVA-P-N---ADDERLKQIAEKSQGFVYLVSRA 173 (256)
T ss_pred HhhhhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEEC-C-C---CCHHHHHHHHHhCCCCEEEEECC
Confidence 1224444555666666 888888754432 33456778888654322 1 1 25677777666555577765555
Q ss_pred CCcccC--CCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 239 NPTGSV--YPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 239 NPtG~~--~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
--||.. ++.+ +.+.++.++++.+..|++|
T Consensus 174 G~TG~~~~~~~~-~~~~i~~lr~~~~~pi~vg 204 (256)
T TIGR00262 174 GVTGARNRAASA-LNELVKRLKAYSAKPVLVG 204 (256)
T ss_pred CCCCCcccCChh-HHHHHHHHHhhcCCCEEEe
Confidence 667764 5544 4555555555435555554
No 409
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=65.23 E-value=21 Score=34.39 Aligned_cols=72 Identities=11% Similarity=0.247 Sum_probs=48.9
Q ss_pred EEcCCCCCChHHHHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 183 IIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 183 lv~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
+..-|+|++..++... -..-++.+|.. .-++.+++....+.|.++|.+-.- +.++-++|.++++++
T Consensus 48 v~G~~~y~sv~dlp~~~~~DlAvi~vp~~------~v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~ 115 (291)
T PRK05678 48 VLGLPVFNTVAEAVEATGANASVIYVPPP------FAADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERK 115 (291)
T ss_pred EeCeeccCCHHHHhhccCCCEEEEEcCHH------HHHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHc
Confidence 3455677777777664 45555556532 367888888888888776644332 244456899999999
Q ss_pred CCeEEEE
Q 012095 261 PRLLVLS 267 (471)
Q Consensus 261 ~~~~ii~ 267 (471)
++.|+=
T Consensus 116 -girvlG 121 (291)
T PRK05678 116 -KTRLIG 121 (291)
T ss_pred -CCEEEC
Confidence 999993
No 410
>PRK08265 short chain dehydrogenase; Provisional
Probab=64.62 E-value=73 Score=29.74 Aligned_cols=96 Identities=15% Similarity=0.068 Sum_probs=50.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...+++|.|+...=..+.+.|++.|-.|++.+-.-.......+..+.++..++.|.. |.+.+++.+.. +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~~g~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATVVARFGR 80 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 345666665555445667777888877776544322333444555666666666532 55556555432 3
Q ss_pred CcEEEEcCC-CCCcccCCCHHHHHHHHH
Q 012095 229 SRLLILCSP-SNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 229 ~~~i~i~~p-~NPtG~~~~~~~l~~i~~ 255 (471)
...++.+.. ..+.+...+.+++++..+
T Consensus 81 id~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 81 VDILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CCEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 444443322 122333456555555443
No 411
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=62.62 E-value=25 Score=29.17 Aligned_cols=56 Identities=11% Similarity=0.322 Sum_probs=43.8
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE--cCC---CCCcccCCCHHHHHHHHHHHHhC
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLIL--CSP---SNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i--~~p---~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
.+++.+|.. ..+|++.+.+++......|++ |.| |+..|......+++.+-++..+.
T Consensus 29 vriIrvpC~----Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~ 89 (124)
T PF02662_consen 29 VRIIRVPCS----GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEEL 89 (124)
T ss_pred eEEEEccCC----CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHc
Confidence 566667663 348999999999888877765 555 56899999988888888888776
No 412
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=62.52 E-value=1.1e+02 Score=29.81 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|.+..-....... ....|+..+++..++.++..+- ..| -.|+++...-..-...++.+|++++.++-
T Consensus 50 tGS~K~R~a~~~l~~a~~~---g~~~vv~~SsGN~g~alA~~a~-~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 50 TGSFKDRGMTVAVSKAKEL---GVKAVACASTGNTSASLAAYAA-RAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred cccHHHhhHHHHHHHHHHc---CCCEEEEeCCCHHHHHHHHHHH-HcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 5666666554332221111 2346777778888887654432 233 45556655533445678899999998863
No 413
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=61.92 E-value=99 Score=28.65 Aligned_cols=104 Identities=23% Similarity=0.255 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHHH-hCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 012095 133 GTLELRSAICHKLKEE-NGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTR 209 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~-~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 209 (471)
|....|....-..... .|. .....|+..+++..+..++..+- ..| -.|+++...-......++..|++++.++-+
T Consensus 28 gS~K~R~a~~~l~~a~~~g~-~~~~~vv~~ssGN~g~alA~~a~-~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 28 GSFKDRGALNLILLAEEEGK-LPKGVIIESTGGNTGIALAAAAA-RLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred CCcHHHHHHHHHHHHHHcCC-CCCCEEEEeCCcHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 5556665554333222 231 11234555556677666544443 244 345555555444556789999999988743
Q ss_pred CCCCCcCCHHHH-HhhhccCCcEEEEcCCCCCccc
Q 012095 210 ISENFLLDPKVL-ESKLTEKSRLLILCSPSNPTGS 243 (471)
Q Consensus 210 ~~~~~~ld~e~l-~~~l~~~~~~i~i~~p~NPtG~ 243 (471)
|. +...+ ++...+....++++...||.+.
T Consensus 106 ----~~-~~~~~a~~~~~~~~~~~~~~~~~n~~~~ 135 (244)
T cd00640 106 ----FD-DAIALAKELAEEDPGAYYVNQFDNPANI 135 (244)
T ss_pred ----HH-HHHHHHHHHHHhCCCCEecCCCCCHHHH
Confidence 11 22222 2333333555555433566443
No 414
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=61.78 E-value=1.1e+02 Score=29.46 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=44.3
Q ss_pred CCHHHHHHHHHHHHHH-hCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC
Q 012095 133 GTLELRSAICHKLKEE-NGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTR 209 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~-~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~ 209 (471)
|....|.......... .|.......|+..+++..+...+..+- +.-.-.|+++.-.-..-...++.+|++++.++-.
T Consensus 30 gS~K~R~a~~~l~~a~~~g~~~~~~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 30 GSVKDRIALYMIEDAEKRGLLKPGTTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred CcchHHHHHHHHHHHHHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 6666666443332211 221101144677777887776555442 2222456666655555667899999999998743
No 415
>PRK06352 threonine synthase; Validated
Probab=61.57 E-value=87 Score=31.12 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=55.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHH-HHHHcCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGI-NAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~-~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|..|..++-..+.+.+... +.+- ..-.+ .+.|....|.+....... ..| ...|+..+++..+..+++.+
T Consensus 21 ~~~l~~G~TPL~~~~~l~~~~g~~l~~-K~E~~-nptGS~KdR~a~~~i~~a~~~g----~~~vV~aSsGN~G~AlA~~a 94 (351)
T PRK06352 21 MISLAEGNTPLIPLPNLSKELGVTLYG-KYEGL-NPTGSFKDRGMVMAVAKAKEEG----AEAVICASTGNTSAAAAAYA 94 (351)
T ss_pred ccccCCCCCCeeEcHhhHHHhCCeEEE-EecCC-CCccChHHHHHHHHHHHHHHCC----CCEEEEECCcHHHHHHHHHH
Confidence 5778888755433333322221 1110 11223 335777777666543322 223 24666666777776554443
Q ss_pred hcCCC--CeEEEcCCCC-CChHHHHHHcCCEEEEecC
Q 012095 175 VCSPG--DEVIIPAPFW-VSYPEMARIADATPVILPT 208 (471)
Q Consensus 175 l~~~g--d~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~ 208 (471)
- ..| -.|++|+... ..-...++.+|++++.++-
T Consensus 95 a-~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~ 130 (351)
T PRK06352 95 T-RAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQG 130 (351)
T ss_pred H-HcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECC
Confidence 2 234 3456665433 3344667899999998873
No 416
>PRK08197 threonine synthase; Validated
Probab=59.32 E-value=1.2e+02 Score=30.56 Aligned_cols=106 Identities=13% Similarity=0.089 Sum_probs=57.2
Q ss_pred eEEcCCCCCCCCChHHHHHHH--HHHHHcCCCCCCCCCCCHHHHHHHHHHHH-HHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAG--INAIREGFTRYTPNAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~--~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~-~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
.++|+.|..++-..+.+.+.+ .+.+-+ .-.+.| .|....|.+...... ...| ...|+..+++..+..++..
T Consensus 72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K-~E~~nP-tGSfKdRga~~~i~~a~~~g----~~~vv~aSsGN~g~alA~~ 145 (394)
T PRK08197 72 IVSLGEGMTPLLPLPRLGKALGIGRLWVK-DEGLNP-TGSFKARGLAVGVSRAKELG----VKHLAMPTNGNAGAAWAAY 145 (394)
T ss_pred CCccCcCCCCceEhHHHHHHhCCCcEEEE-eCCCCC-CcCcHHhHHHHHHHHHHHcC----CCEEEEeCCcHHHHHHHHH
Confidence 477777775543333333222 111111 122334 576666654433221 1223 3567777777777776655
Q ss_pred Hhc-CCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 174 AVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 174 ~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
+-. .-.-.|++|.-.-..-...++.+|++++.++-
T Consensus 146 aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~ 181 (394)
T PRK08197 146 AARAGIRATIFMPADAPEITRLECALAGAELYLVDG 181 (394)
T ss_pred HHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 432 22245666655444556788999999999873
No 417
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=58.60 E-value=1.4e+02 Score=29.52 Aligned_cols=108 Identities=13% Similarity=0.133 Sum_probs=60.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeE--EEcCCCCCC------hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEV--IIPAPFWVS------YPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~V--lv~~p~y~~------~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+-|+..+||.....++..+.-.-|..+ +..++.|.+ ...+++..|.....+.. |.+.+.+...
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 4677888998888776533322224333 455666652 33456668888877764 4444444332
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 277 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~ 277 (471)
...+ +..+|...+ .......+.++|+++ |+.+|...-..+-.|+
T Consensus 132 ~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~-gi~~Il~G~~~dE~fg 175 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQ-DHAIFASVYQVALKF-NIPLIIWGENIAEEYG 175 (343)
T ss_pred HHHh-----ccCCCchhh-hhHHHHHHHHHHHHh-CCCEEEeCCCHHHhcC
Confidence 2111 223333222 233467888999999 9988877555443343
No 418
>PRK08329 threonine synthase; Validated
Probab=58.16 E-value=1.3e+02 Score=29.71 Aligned_cols=73 Identities=12% Similarity=0.175 Sum_probs=45.1
Q ss_pred CCCCHHHHHHHHHHHH-HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 131 NAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~-~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
+.|....|.+...... +..| .+.|+..+++..+..++..+-. -| -.|++|...-..-...++.+|++++.++
T Consensus 83 PtGSfKdRga~~~i~~a~~~g----~~~vv~aSsGN~g~alA~~aa~-~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~ 157 (347)
T PRK08329 83 PTGSFKDRGTYVTVAKLKEEG----INEVVIDSSGNAALSLALYSLS-EGIKVHVFVSYNASKEKISLLSRLGAELHFVE 157 (347)
T ss_pred CCcCCHHHHHHHHHHHHHHcC----CCEEEEECCCcHHHHHHHHHHH-cCCcEEEEECCCChHHHHHHHHHcCCEEEEEC
Confidence 3477777766543322 2233 2567777777777766655432 33 3566665544445678899999999987
Q ss_pred C
Q 012095 208 T 208 (471)
Q Consensus 208 ~ 208 (471)
-
T Consensus 158 ~ 158 (347)
T PRK08329 158 G 158 (347)
T ss_pred C
Confidence 3
No 419
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=57.35 E-value=97 Score=28.59 Aligned_cols=98 Identities=16% Similarity=0.125 Sum_probs=62.8
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEE--cCC------CCC-----ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVII--PAP------FWV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vlv--~~p------~y~-----~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++..+|+..+..++.+++-+ .+.+.+ ..| +|+ -...+++..|..++.+....+ +.-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45678988888877776654 543321 112 111 123467788988776665321 12234555555
Q ss_pred hcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 225 l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+ +...|+ +|.+.+..++..+-++|.+. |+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~-gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCREL-GLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHc-CCEEe
Confidence 543 566666 79999999999999999998 87766
No 420
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=56.53 E-value=1.8e+02 Score=27.90 Aligned_cols=76 Identities=20% Similarity=0.267 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|.+........ .|.......|+-.+++..+..++..+-. -| -.|++++..-..-...++.+|++++.++-
T Consensus 33 tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~~-~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 33 SGSVKDRIALNMIWDAEKRGLLKPGKTIVEPTSGNTGIALAMVAAA-RGYKLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred CCcchHHHHHHHHHHHHHcCCCCCCCEEEEeCCChhHHHHHHHHHH-cCCeEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 47777777665443322 2321112457777788888876655432 34 45666765555567789999999998874
No 421
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=56.03 E-value=25 Score=34.69 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=46.2
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+...+.++...-+..+.+|.+..+...++-..... .....+.|-.+|.+++++|++.|+++ ++-||
T Consensus 25 d~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~r-gI~vI 92 (329)
T cd06568 25 DLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAER-HITVV 92 (329)
T ss_pred HHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHc-CCEEE
Confidence 4456677777777776666777766655543221111 11224557789999999999999999 88887
No 422
>PRK05638 threonine synthase; Validated
Probab=55.71 E-value=1.8e+02 Score=29.84 Aligned_cols=73 Identities=12% Similarity=0.039 Sum_probs=44.8
Q ss_pred CCCCCHHHHHHHHHHHH-HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEe
Q 012095 130 PNAGTLELRSAICHKLK-EENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVIL 206 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~-~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v 206 (471)
.+.|....|.+...... ...| .+.|+..+++..+..++..+- ..| -.|++|.-.-..-...++.+|++++.+
T Consensus 90 nPtGSfKdR~a~~~i~~a~~~g----~~~vv~aSsGN~g~alA~~aa-~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v 164 (442)
T PRK05638 90 NPTGSFRDRLATVAVSYGLPYA----ANGFIVASDGNAAASVAAYSA-RAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRY 164 (442)
T ss_pred CCCCChHHHHHHHHHHHHHHcC----CCEEEEeCCChHHHHHHHHHH-HcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEE
Confidence 34677777765443321 1222 356777777777777665543 234 356666644444557889999999998
Q ss_pred c
Q 012095 207 P 207 (471)
Q Consensus 207 ~ 207 (471)
+
T Consensus 165 ~ 165 (442)
T PRK05638 165 G 165 (442)
T ss_pred C
Confidence 6
No 423
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=55.52 E-value=84 Score=28.91 Aligned_cols=98 Identities=18% Similarity=0.189 Sum_probs=56.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEE----EcC-C-C--CC-----ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVI----IPA-P-F--WV-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vl----v~~-p-~--y~-----~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++..+|+..+..++.+++-+ .+.+. ++. . + |+ -...+++..|...+.+++..+.+ --.+++.++
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~--~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEE--DYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CC--CHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccc--hhhHHHHHH
Confidence 56778999998887777655 44321 211 1 1 11 23457889999998888753221 235677776
Q ss_pred hcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 225 LTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 225 l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+++ +...++ +|.+.+...+..+-++|.+. |+-.+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~l-Gl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERL-GLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHC-T-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHc-CCEEE
Confidence 653 455665 79999999999999999999 88777
No 424
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=55.22 E-value=1.8e+02 Score=29.87 Aligned_cols=76 Identities=21% Similarity=0.225 Sum_probs=46.8
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|.+........ .|.--..+.|+-++++..+..++..+-. -| -.|++|+..-..-...++.+|++++.++-
T Consensus 38 tGS~K~R~a~~~l~~a~~~g~~~~g~~vv~~ssGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 38 GGSVKDRIALRMIEDAEASGRLKPGDTIIEPTSGNTGIGLALVAAI-KGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPT 116 (454)
T ss_pred CcchHHHHHHHHHHHHHHcCCCCCCCEEEEeCCcHHHHHHHHHHHH-cCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCC
Confidence 57778887654433322 3321112457777788888776655432 34 35666665444556788999999999874
No 425
>PLN00011 cysteine synthase
Probab=54.24 E-value=1.6e+02 Score=28.83 Aligned_cols=75 Identities=17% Similarity=0.235 Sum_probs=47.3
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCC--CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEe
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTP--DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVIL 206 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~--~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v 206 (471)
.|....|.+..-..... .|. +.+ +.|+..+++..++.++..+-. -| -.|++|...-..-...++.+|++++.+
T Consensus 44 tGS~K~R~a~~~l~~a~~~g~-~~~g~~~vv~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~ 121 (323)
T PLN00011 44 CSSVKDRIAYSMIKDAEDKGL-ITPGKSTLIEATAGNTGIGLACIGAA-RGYKVILVMPSTMSLERRIILRALGAEVHLT 121 (323)
T ss_pred ccccchHHHHHHHHHHHHcCC-CCCCCcEEEEeCCChHHHHHHHHHHH-cCCeEEEEeCCCCCHHHHHHHHHcCCEEEEE
Confidence 56666666554433222 231 222 457777888888876665532 33 456677665556678899999999988
Q ss_pred cC
Q 012095 207 PT 208 (471)
Q Consensus 207 ~~ 208 (471)
+-
T Consensus 122 ~~ 123 (323)
T PLN00011 122 DQ 123 (323)
T ss_pred CC
Confidence 73
No 426
>PRK06721 threonine synthase; Reviewed
Probab=53.29 E-value=2.4e+02 Score=27.97 Aligned_cols=71 Identities=20% Similarity=0.201 Sum_probs=43.2
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCC-CCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPF-WVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~-y~~~~~~~~~~G~~~~~v~ 207 (471)
.|....|.+....... ..| ...|+..+++..++.++..+- ..| -.|++|... -..-...++.+|++++.++
T Consensus 55 tGS~KdR~a~~~i~~a~~~g----~~~vV~aSsGN~G~alA~~aa-~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~ 129 (352)
T PRK06721 55 TGSFKDRGMVMAVAKAKEEG----SEAIICASTGNTSASAAAYAA-RLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIE 129 (352)
T ss_pred ccchHHHHHHHHHHHHHHCC----CCEEEEECCcHHHHHHHHHHH-HCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEEC
Confidence 5777777766544332 222 245666667777776555443 234 345566553 2345667899999999887
No 427
>PRK08246 threonine dehydratase; Provisional
Probab=52.76 E-value=1.7e+02 Score=28.35 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
+.|....|-++........ ....|+..+++..++..+..+- +.-.-.|+++...-......++.+|++++.++
T Consensus 48 ptGS~K~R~a~~~~~~~~~----~~~~vv~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 121 (310)
T PRK08246 48 HTGSFKARGAFNRLLAAPV----PAAGVVAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVG 121 (310)
T ss_pred CCCCCHHHHHHHHHHhhcc----cCCeEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeC
Confidence 4577788877765543221 3456888888888887666553 22234566776655555678899999998886
No 428
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=52.76 E-value=1.5e+02 Score=26.97 Aligned_cols=96 Identities=16% Similarity=0.198 Sum_probs=56.6
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
++...|++..||..+... ++.|++.|-.|.+-+|............| ++..+.- . ...+.+. . ..+
T Consensus 7 l~gk~vlVvGgG~va~rk-~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~-----~-~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRK-ARLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE-----G-AFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHH-HHHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC-----C-cEE
Confidence 345688888888888775 56677788777777776654333333333 4444432 2 2233331 2 344
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE-EEccC
Q 012095 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV-LSDEI 270 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i-i~De~ 270 (471)
++..++++ +.-+.|+..|++. ++++ +.|+.
T Consensus 73 Vi~at~d~-------~ln~~i~~~a~~~-~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDE-------ELNRRVAHAARAR-GVPVNVVDDP 103 (205)
T ss_pred EEECCCCH-------HHHHHHHHHHHHc-CCEEEECCCc
Confidence 55555543 2346789999998 8777 35654
No 429
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=52.73 E-value=28 Score=33.84 Aligned_cols=67 Identities=12% Similarity=0.187 Sum_probs=45.1
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+...+.++...-+..+.+|.+..+...++-..... .++ .+.|-.+|++++++|++.|+++ ++-||
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~r-gI~vi 89 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAAR-GIEVI 89 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHc-CCEEE
Confidence 4455677887777776666777765555443322111 111 2345689999999999999999 88777
No 430
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=52.40 E-value=2.1e+02 Score=27.12 Aligned_cols=167 Identities=17% Similarity=0.156 Sum_probs=95.6
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+.+..+.+.|-++|-|+.=..+.-. -|.+..+-.+++..+.+ . ...-+.+.+.-.+.-.+| -+++|--
T Consensus 35 e~i~~L~~~GaD~iELGvPfSDPvADGP~Iq~A~~rAL~~g~t---~----~~~lel~~~~r~~~~~~P----ivlm~Y~ 103 (265)
T COG0159 35 EIIKTLVEAGADILELGVPFSDPVADGPTIQAAHLRALAAGVT---L----EDTLELVEEIRAKGVKVP----IVLMTYY 103 (265)
T ss_pred HHHHHHHhCCCCEEEecCCCCCcCccCHHHHHHHHHHHHCCCC---H----HHHHHHHHHHHhcCCCCC----EEEEEec
Confidence 3445556678888777655433222 36777777788765332 2 223333333221111111 2333311
Q ss_pred ---hHHHHHHHHHHhcCCC-CeEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 ---AKQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ---~~~al~~~~~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
-.-++...++.+.+.| |.|+++|--+. .+...++..|..++++-.. + -+.+.+++........||+.+
T Consensus 104 Npi~~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lvaP--t---t~~~rl~~i~~~a~GFiY~vs 178 (265)
T COG0159 104 NPIFNYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVAP--T---TPDERLKKIAEAASGFIYYVS 178 (265)
T ss_pred cHHHHhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeCC--C---CCHHHHHHHHHhCCCcEEEEe
Confidence 2334554555555666 89999885332 2446677888887766532 2 255667766655556777777
Q ss_pred CCCCcccCCC-HHHHHHHHHHHHhCCCeEEEE
Q 012095 237 PSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 237 p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~ 267 (471)
-+--||.-.. ...+.++++..+++.++.+++
T Consensus 179 ~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 210 (265)
T COG0159 179 RMGVTGARNPVSADVKELVKRVRKYTDVPVLV 210 (265)
T ss_pred cccccCCCcccchhHHHHHHHHHHhcCCCeEE
Confidence 7777887666 334788888888875666653
No 431
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=52.25 E-value=1.4e+02 Score=28.86 Aligned_cols=108 Identities=12% Similarity=0.208 Sum_probs=64.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCC--eEEEcC--CCCCChHHHHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPA--PFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
+-.++|++|.|.+......+....++|. .|++.+ |.+.++..+..+ .|++..-++ | .++-+.+.
T Consensus 160 ihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------d-aaVfA~Ms 229 (353)
T KOG1465|consen 160 IHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMS 229 (353)
T ss_pred hccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------c-HHHHHHhh
Confidence 3457899999998888877777777763 355543 555554444333 456544443 2 33444444
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y 271 (471)
+-.|+|+-...--+-|.+....-...++..|++| .+++++=...
T Consensus 230 rVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h-~vPv~VlAp~ 273 (353)
T KOG1465|consen 230 RVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHH-SVPVIVLAPM 273 (353)
T ss_pred hcceEEEEeeeEecCCCeeccchHHHHHHHHHhc-CCcEEEecch
Confidence 4445554443322334454444566778888888 8888865443
No 432
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=52.08 E-value=2.4e+02 Score=27.53 Aligned_cols=83 Identities=18% Similarity=0.141 Sum_probs=46.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC-CcEE
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK-SRLL 232 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~-~~~i 232 (471)
..|+..+++..+..++..+-. -| -.|+++...-..-...++.+|++++.++-+ .+ -+...+.+.+.+. +...
T Consensus 52 ~~vv~aSsGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~---~~-~~~~~~~~~l~~~~~~~~ 126 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAARK-LGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV---WW-EADNYLREELAENDPGPV 126 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc---hH-HHHHHHHHHHHhccCCcE
Confidence 457777777777766555432 34 345555544344467889999999988632 01 1223333334333 3555
Q ss_pred EEcCCCCCccc
Q 012095 233 ILCSPSNPTGS 243 (471)
Q Consensus 233 ~i~~p~NPtG~ 243 (471)
++...+||.+.
T Consensus 127 ~~~~~~n~~~~ 137 (316)
T cd06448 127 YVHPFDDPLIW 137 (316)
T ss_pred EeCCCCCchhh
Confidence 65444566553
No 433
>PRK06194 hypothetical protein; Provisional
Probab=51.33 E-value=1.6e+02 Score=27.66 Aligned_cols=66 Identities=12% Similarity=0.048 Sum_probs=36.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
..+++|.|+...=..+.+.|++.|..|++.+-.-....... ...|.++..+..|. -|.+.+++.+.
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~~~~~~~ 75 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDV-----SDAAQVEALAD 75 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHH
Confidence 45666665554445566777888877776553322222222 22366676676553 25666666553
No 434
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=50.88 E-value=1.6e+02 Score=28.59 Aligned_cols=74 Identities=11% Similarity=0.196 Sum_probs=49.1
Q ss_pred CeEEEcCCCCCChHHHHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCC-CCCcccCCCHHHHHHHHHH
Q 012095 180 DEVIIPAPFWVSYPEMARI--ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP-SNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 180 d~Vlv~~p~y~~~~~~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l 256 (471)
++| .--|+|++..++... ...-++.+|.. .-++.+++....+.|.++|.+- -..+| ..+.+.++
T Consensus 50 ~~i-~G~~~y~sv~dlp~~~~~DlAvI~vPa~------~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ 116 (300)
T PLN00125 50 TEH-LGLPVFNTVAEAKAETKANASVIYVPPP------FAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAAL 116 (300)
T ss_pred ceE-cCeeccCCHHHHhhccCCCEEEEecCHH------HHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHH
Confidence 444 467889888887764 34555666532 3678888888888887766444 33344 34556667
Q ss_pred HHhCCCeEEEE
Q 012095 257 VAKHPRLLVLS 267 (471)
Q Consensus 257 ~~~~~~~~ii~ 267 (471)
++++ ++.||=
T Consensus 117 ar~~-girviG 126 (300)
T PLN00125 117 NRQS-KTRLIG 126 (300)
T ss_pred Hhhc-CCEEEC
Confidence 8999 898883
No 435
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=50.74 E-value=1.5e+02 Score=29.60 Aligned_cols=107 Identities=18% Similarity=0.159 Sum_probs=60.0
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCC--CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEe
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTP--DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVIL 206 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~--~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v 206 (471)
.|....|.+..-.... ..|. +.+ ..|+-.+++..++.++..+- ..| -.|++++..-..-...++.+|++++.+
T Consensus 86 tGS~KdR~A~~~l~~a~~~G~-i~pG~~~vV~aSsGN~G~alA~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~ 163 (368)
T PLN02556 86 TSSIKDRPALAMIEDAEKKNL-ITPGKTTLIEPTSGNMGISLAFMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLT 163 (368)
T ss_pred ccchHHHHHHHHHHHHHHcCC-cCCCCCEEEEeCCchHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEE
Confidence 4666666665433322 2232 233 35676778888887666553 234 345565544445567899999999988
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcc
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG 242 (471)
+.. .+..-..+...+.+.+++..++++..+||.+
T Consensus 164 ~~~--~~~~~~~~~a~~l~~~~~~~~~~~q~~np~~ 197 (368)
T PLN02556 164 DPT--KGMGGTVKKAYELLESTPDAFMLQQFSNPAN 197 (368)
T ss_pred CCC--CCccHHHHHHHHHHHhcCCCCccCCCCCHHH
Confidence 632 1211234444444444555665554556654
No 436
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=48.64 E-value=74 Score=27.69 Aligned_cols=90 Identities=14% Similarity=0.082 Sum_probs=50.0
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCC
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p 237 (471)
|+++.++...=..+++.|++.|-.|....-.-..... ..+++++...+ .|++.+.+++. +..+++.+.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-------~d~~~~~~al~-~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-------FDPDSVKAALK-GADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-------TCHHHHHHHHT-TSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-------hhhhhhhhhhh-hcchhhhhhh
Confidence 3444432222344666777777555543322222222 44555544432 48899999887 4556655443
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
.++. +.+..+.+++.|+++ ++
T Consensus 70 ~~~~----~~~~~~~~~~a~~~~-~~ 90 (183)
T PF13460_consen 70 PPPK----DVDAAKNIIEAAKKA-GV 90 (183)
T ss_dssp STTT----HHHHHHHHHHHHHHT-TS
T ss_pred hhcc----ccccccccccccccc-cc
Confidence 3333 266688888888887 53
No 437
>PLN03013 cysteine synthase
Probab=47.23 E-value=2.1e+02 Score=29.40 Aligned_cols=108 Identities=15% Similarity=0.164 Sum_probs=59.4
Q ss_pred CCCCCHHHHHHHHHHHHH-HhCCCCCCC--cEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEE
Q 012095 130 PNAGTLELRSAICHKLKE-ENGLSYTPD--QILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPV 204 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~-~~g~~~~~~--~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~ 204 (471)
.+.|....|-+..-.... ..|. +.+. .|+-.+++..++.++..+-. .| -.|++|+-.-..-...++.+|++++
T Consensus 148 NPtGSfKdR~A~~~l~~a~~~G~-l~pG~~~VVeaSSGN~G~ALA~~a~~-~G~~~~VvvP~~~s~~K~~~ira~GAeVi 225 (429)
T PLN03013 148 EPCCSVKDRIGYSMVTDAEQKGF-ISPGKSVLVEPTSGNTGIGLAFIAAS-RGYRLILTMPASMSMERRVLLKAFGAELV 225 (429)
T ss_pred CCccccHHHHHHHHHHHHHHcCC-cCCCCcEEEEECCcHHHHHHHHHHHH-cCCCEEEEECCCCcHHHHHHHHHcCCEEE
Confidence 445777777655544332 2232 2333 36777778878876665542 33 3566676665566688999999999
Q ss_pred EecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 205 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
.++-. .++.-..+..++...+....++++.-.||.
T Consensus 226 ~v~~~--~~~~~a~~~A~ela~~~~g~~~~~qy~Np~ 260 (429)
T PLN03013 226 LTDPA--KGMTGAVQKAEEILKNTPDAYMLQQFDNPA 260 (429)
T ss_pred EECCC--CChHHHHHHHHHHHhhcCCeEeCCCCCCHH
Confidence 88642 111111233333333334455544335664
No 438
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=47.00 E-value=74 Score=32.38 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=57.4
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChH----HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYP----EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 163 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
...+++.. +..++++-+.+++++|....-. .+.+..|.. +++-. ++.+.-+++.+.+.+..+..-++..-|+
T Consensus 262 t~~eai~~-~~~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~-ipi~g--dE~~~~~~~~~~~~i~~~a~d~v~ik~~ 337 (408)
T cd03313 262 TSEELIDY-YKELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDK-IQIVG--DDLFVTNPERLKKGIEKKAANALLIKVN 337 (408)
T ss_pred CHHHHHHH-HHHHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCC-CeEEc--CCcccCCHHHHHHHHHhCCCCEEEEccc
Confidence 34566663 4445555568889999876433 233333222 23322 2323347999999887665445555555
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
.-.| ..+..+++++|+++ ++.+++
T Consensus 338 ~iGG----ite~~~ia~lA~~~-G~~~~~ 361 (408)
T cd03313 338 QIGT----LTETIEAIKLAKKN-GYGVVV 361 (408)
T ss_pred ccCC----HHHHHHHHHHHHHc-CCeEEc
Confidence 4333 23488899999999 888763
No 439
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.56 E-value=39 Score=32.98 Aligned_cols=61 Identities=10% Similarity=0.140 Sum_probs=39.4
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+..++.++...-+..+.+|.+..+.+.+..... ..|-.+|.+++++|++.|+++ ++-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~r-gI~vI 85 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDR-GIRVV 85 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHc-CCEEE
Confidence 34455666666666655556655544433321111 135679999999999999999 88877
No 440
>PLN02970 serine racemase
Probab=46.49 E-value=2.9e+02 Score=27.04 Aligned_cols=73 Identities=8% Similarity=0.080 Sum_probs=45.4
Q ss_pred CCCHHHHHHHHHHHH--HHhCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLK--EENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~--~~~g~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|-+...... +..+ ...|+..+++..++.++..+-. .-.-.|++|+.+...-...++.+|++++.++-
T Consensus 54 tGSfKdRga~~~i~~~~~~~~----~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 54 GGAFKFRGACNAIFSLSDDQA----EKGVVTHSSGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred CCCcHHHHHHHHHHHhhHhhc----CCeEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 466666655444322 1111 2458888888888876665532 22245667766555556788999999998873
No 441
>PLN02565 cysteine synthase
Probab=45.54 E-value=2.4e+02 Score=27.63 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=48.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-hCCCCCC--CcEEEeCChHHHHHHHHHHhc-CCCCeEEEcCCCCCChHHHHHHcCCEE
Q 012095 128 YTPNAGTLELRSAICHKLKEE-NGLSYTP--DQILVSNGAKQSILQAVLAVC-SPGDEVIIPAPFWVSYPEMARIADATP 203 (471)
Q Consensus 128 Y~~~~G~~~lr~~ia~~~~~~-~g~~~~~--~~i~it~G~~~al~~~~~~l~-~~gd~Vlv~~p~y~~~~~~~~~~G~~~ 203 (471)
|..+.|....|-+..-..... .|. +.+ ..|+-.+++..++.++..+-. .---.|++|+-.-..-...++.+|+++
T Consensus 38 ~~nPtGSfKdR~A~~~l~~~~~~g~-~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V 116 (322)
T PLN02565 38 MMEPCSSVKDRIGYSMITDAEEKGL-IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAEL 116 (322)
T ss_pred ccCCccchHHHHHHHHHHHHHHcCC-CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEE
Confidence 435567777776665444322 232 122 236666777777776555432 222456666665566678899999999
Q ss_pred EEec
Q 012095 204 VILP 207 (471)
Q Consensus 204 ~~v~ 207 (471)
+.++
T Consensus 117 ~~~~ 120 (322)
T PLN02565 117 VLTD 120 (322)
T ss_pred EEeC
Confidence 8875
No 442
>PRK13028 tryptophan synthase subunit beta; Provisional
Probab=45.52 E-value=3.4e+02 Score=27.55 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHH-HhCCCCCCCcEEE-eCChHHHHHHHHHHh-cCCCCeEEEcCCCCC---ChHHHHHHcCCEEE
Q 012095 131 NAGTLELRSAICHKLKE-ENGLSYTPDQILV-SNGAKQSILQAVLAV-CSPGDEVIIPAPFWV---SYPEMARIADATPV 204 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~-~~g~~~~~~~i~i-t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~---~~~~~~~~~G~~~~ 204 (471)
..|....|.++...+.. +.| ...+++ +++++.++..+..+- +.-.-.|+++...-. .....++.+|++++
T Consensus 89 ptGS~K~r~al~~~l~A~~~G----~~~vI~etgsGnhG~A~A~aaa~~Gl~~~I~m~~~d~~~q~~nv~~mr~~GAeVi 164 (402)
T PRK13028 89 HTGAHKINNCLGQALLAKRMG----KKRLIAETGAGQHGVATATAAALFGLECEIYMGEVDIERQHPNVFRMKLLGAEVV 164 (402)
T ss_pred CCcchHHHHHHHHHHHHHHcC----CCeEEEecCcHHHHHHHHHHHHHcCCCEEEEECCCcchhhHHHHHHHHHcCCEEE
Confidence 35788999888776543 333 346776 556777776655543 222245666653221 22447899999999
Q ss_pred EecC
Q 012095 205 ILPT 208 (471)
Q Consensus 205 ~v~~ 208 (471)
.++-
T Consensus 165 ~v~~ 168 (402)
T PRK13028 165 PVTR 168 (402)
T ss_pred EEcC
Confidence 9973
No 443
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=45.29 E-value=1.9e+02 Score=28.45 Aligned_cols=86 Identities=24% Similarity=0.271 Sum_probs=45.8
Q ss_pred CCCC-cEEE-eCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcC---CHHHHHhhh
Q 012095 153 YTPD-QILV-SNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLL---DPKVLESKL 225 (471)
Q Consensus 153 ~~~~-~i~i-t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~l---d~e~l~~~l 225 (471)
+.|. ..++ .+++..++.+++.+-+ .|=.+++.-|..-+.. ..++.+|++++..|.. .++.- -.+.-++.+
T Consensus 100 i~pg~stliEpTSGNtGigLA~~~a~-~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a--~~~~~~e~ai~~a~~l~ 176 (362)
T KOG1252|consen 100 ITPGKSTLIEPTSGNTGIGLAYMAAL-RGYKCIITMPEKMSKEKRILLRALGAEIILTPPA--AGMKGPESAIGKAEELL 176 (362)
T ss_pred ccCCceEEEecCCCchHHHHHHHHHH-cCceEEEEechhhhHHHHHHHHHcCCEEEecChH--HccCChHHHHHHHHHHH
Confidence 4554 3333 2334445655555543 4545555555554444 5678999999998864 23222 222233334
Q ss_pred ccCCcEEEE---cCCCCCc
Q 012095 226 TEKSRLLIL---CSPSNPT 241 (471)
Q Consensus 226 ~~~~~~i~i---~~p~NPt 241 (471)
++-+.++++ .||.||-
T Consensus 177 ~~~pna~~l~Qf~np~Np~ 195 (362)
T KOG1252|consen 177 NKTPNAYILDQFHNPGNPL 195 (362)
T ss_pred HhCCChHHHHHhcCCCCcc
Confidence 444555554 5666665
No 444
>PRK06381 threonine synthase; Validated
Probab=45.28 E-value=3e+02 Score=26.74 Aligned_cols=72 Identities=21% Similarity=0.128 Sum_probs=43.4
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|.+....... ..| ...|+..+++..++.++..+- ..| -.|+++...-..-...++.+|++++.++-
T Consensus 43 tGS~K~R~a~~~l~~a~~~g----~~~lv~aSsGN~g~alA~~aa-~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~ 117 (319)
T PRK06381 43 TGTQKDRIAEAHVRRAMRLG----YSGITVGTCGNYGASIAYFAR-LYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDG 117 (319)
T ss_pred ccCcHHHHHHHHHHHHHHcC----CCEEEEeCCcHHHHHHHHHHH-HcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCC
Confidence 5666777665433322 222 246666666777776555543 234 34556654434555788999999999973
No 445
>PRK07476 eutB threonine dehydratase; Provisional
Probab=45.26 E-value=2.7e+02 Score=27.20 Aligned_cols=73 Identities=15% Similarity=0.120 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|.+....... ..|. ...|+..+++..++.++..+- .-| -.|++++..-..-...++.+|++++.++-
T Consensus 46 tGS~K~R~a~~~i~~a~~~~~---~~gvv~aSsGN~g~alA~~a~-~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~ 121 (322)
T PRK07476 46 TGSFKLRGATNALLSLSAQER---ARGVVTASTGNHGRALAYAAR-ALGIRATICMSRLVPANKVDAIRALGAEVRIVGR 121 (322)
T ss_pred CCCchHHHHHHHHHhhhhhhh---CCeEEEECCChHHHHHHHHHH-HhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 5666777654332211 1121 123777788888887665543 234 34556655545566788999999998873
No 446
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=45.02 E-value=1.8e+02 Score=27.90 Aligned_cols=39 Identities=26% Similarity=0.376 Sum_probs=26.8
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh----CCCeEEEEccCCCc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAK----HPRLLVLSDEIYEH 273 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~----~~~~~ii~De~y~~ 273 (471)
...+|+ ||..-+.++.+.|.++.++ ||++++++|=+.++
T Consensus 73 ~~davl-------tGYlgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 73 ECDAVL-------TGYLGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred ccCEEE-------EccCCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 345666 7888888888777776654 56777777765543
No 447
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=44.83 E-value=1.8e+02 Score=29.55 Aligned_cols=63 Identities=17% Similarity=0.163 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCCCCcE-EEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEE
Q 012095 139 SAICHKLKEENGLSYTPDQI-LVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPV 204 (471)
Q Consensus 139 ~~ia~~~~~~~g~~~~~~~i-~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~ 204 (471)
-+..+...+.+|- +...++ +++.| +....+...|...| ..|.+.+=++.-....++..|+++.
T Consensus 163 saAv~lA~~~~~~-L~~~~vlvIGAG--em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~ 227 (414)
T COG0373 163 SAAVELAKRIFGS-LKDKKVLVIGAG--EMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV 227 (414)
T ss_pred HHHHHHHHHHhcc-cccCeEEEEccc--HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee
Confidence 3333444444551 233333 44444 44566788888888 8899999898888888888886553
No 448
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=44.70 E-value=1.4e+02 Score=28.75 Aligned_cols=52 Identities=13% Similarity=0.138 Sum_probs=33.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
..|+.++++..+..++..+- ..| -.|+++.-.-..-...++.+|++++.++-
T Consensus 66 ~~iv~~ssGN~g~alA~~a~-~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 66 KGVVAASAGNHAQGVAYAAK-LLGIPATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred CcEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45777777777776655543 234 34455544433455778999999999874
No 449
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=44.67 E-value=2.2e+02 Score=25.79 Aligned_cols=77 Identities=12% Similarity=0.052 Sum_probs=40.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~ 229 (471)
..+++|.|+...=..+...|++.|..|.+...............+.++..++.|- -|.+.+++.+.+ +.
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANL-----SDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4566665554444556777888887776654433223333333455555555542 255566554431 34
Q ss_pred cEEEEcCC
Q 012095 230 RLLILCSP 237 (471)
Q Consensus 230 ~~i~i~~p 237 (471)
.+++.+..
T Consensus 82 d~vi~~ag 89 (245)
T PRK12936 82 DILVNNAG 89 (245)
T ss_pred CEEEECCC
Confidence 55554443
No 450
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=44.60 E-value=1.5e+02 Score=28.45 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=63.0
Q ss_pred CCHHHHHhhhcc-CCcEEEEcCC-CCCcccCCCHH--------HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 216 LDPKVLESKLTE-KSRLLILCSP-SNPTGSVYPKN--------LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 216 ld~e~l~~~l~~-~~~~i~i~~p-~NPtG~~~~~~--------~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
.|++.+.+.+.+ +|.+|+-+-. ++....--.++ --..|+++|++. +.++|. +-.+++|+|....++.
T Consensus 37 td~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-ga~lVh--iSTDyVFDG~~~~~Y~ 113 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV-GARLVH--ISTDYVFDGEKGGPYK 113 (281)
T ss_pred cChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh-CCeEEE--eecceEecCCCCCCCC
Confidence 378888888865 5776664443 45555544433 236788999999 887774 2234567776544444
Q ss_pred cCCCCCCceEEEecCCcccCccc----------hhheeeEcC--HHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTG----------WRLGYIAGP--KHFVAACNK 326 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G----------~R~G~v~~~--~~~i~~l~~ 326 (471)
.-+. .+=+-+.+-||..|=-. +|++|+.+. ..++..+.+
T Consensus 114 E~D~--~~P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~ 164 (281)
T COG1091 114 ETDT--PNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLR 164 (281)
T ss_pred CCCC--CCChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHH
Confidence 3322 22245677777765222 578888865 345555443
No 451
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=44.29 E-value=36 Score=33.83 Aligned_cols=63 Identities=13% Similarity=0.126 Sum_probs=43.4
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+..+..++..+-+..+.+|.+..+.+.++.... ....|-.+|++++++|++.|+++ ++-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~r-gI~vI 87 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLR-GIRVI 87 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHc-CCEEE
Confidence 44556677777777766667777665555432211 11246789999999999999999 88877
No 452
>PRK07063 short chain dehydrogenase; Provisional
Probab=44.08 E-value=2.3e+02 Score=26.18 Aligned_cols=67 Identities=16% Similarity=0.126 Sum_probs=36.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-----~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
....+++|.|+...-..+.+.|++.|..|++..-.-......... .+.++..+..|.. |.+.+++.+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 77 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT-----DAASVAAAV 77 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCC-----CHHHHHHHH
Confidence 344667776655555566777888887776654322222222222 3456666666532 445555544
No 453
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=43.52 E-value=2.3e+02 Score=25.84 Aligned_cols=80 Identities=9% Similarity=0.078 Sum_probs=42.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
....++||.|+...-..+.+.|++.|..|++..-.-.......... +.++..+..|. .|.+.+.+.+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV-----SDEADVEAAVAAALER 78 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 3346777755554445567777788866665443322222222222 34565666543 366777665532
Q ss_pred --CCcEEEEcCCC
Q 012095 228 --KSRLLILCSPS 238 (471)
Q Consensus 228 --~~~~i~i~~p~ 238 (471)
+..+|+.+...
T Consensus 79 ~~~~d~vi~~ag~ 91 (251)
T PRK07231 79 FGSVDILVNNAGT 91 (251)
T ss_pred hCCCCEEEECCCC
Confidence 35566554433
No 454
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=43.37 E-value=1e+02 Score=31.73 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=46.9
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 187 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
|+|++..++-..-..-++.+|. + .-++.++++...+++.+++.+- --.+|.- ..+.-+++.++|+++ ++.|
T Consensus 53 ~~~~sl~~lp~~~Dlavi~vp~--~----~~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~-girv 124 (447)
T TIGR02717 53 KAYPSVLEIPDPVDLAVIVVPA--K----YVPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKY-GMRL 124 (447)
T ss_pred cccCCHHHCCCCCCEEEEecCH--H----HHHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHc-CCEE
Confidence 4555555443322333444442 1 2567777777778887765433 2234421 122237899999999 9999
Q ss_pred EEccCCCccc
Q 012095 266 LSDEIYEHII 275 (471)
Q Consensus 266 i~De~y~~~~ 275 (471)
+--.+.+.+.
T Consensus 125 lGPnc~G~~~ 134 (447)
T TIGR02717 125 LGPNCLGIIN 134 (447)
T ss_pred EecCeeeEec
Confidence 9887766443
No 455
>PRK11761 cysM cysteine synthase B; Provisional
Probab=43.31 E-value=2.7e+02 Score=26.79 Aligned_cols=75 Identities=23% Similarity=0.380 Sum_probs=46.6
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCC-CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTP-DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~-~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.|....|-+..-..... .|. +.+ ..|+..+++..++.++..+-. .| -.|++|+-.-..-...++.+|++++.++
T Consensus 39 tGS~K~R~a~~~~~~a~~~g~-~~~g~~vv~aSsGN~g~alA~~a~~-~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~ 116 (296)
T PRK11761 39 AGSVKDRPALSMIVQAEKRGE-IKPGDTLIEATSGNTGIALAMIAAI-KGYRMKLIMPENMSQERRAAMRAYGAELILVP 116 (296)
T ss_pred CCCchhHHHHHHHHHHHHcCC-CCCCCEEEEeCCChHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 56666665443322221 232 122 458888888888877665542 34 3566666544556678999999999998
Q ss_pred C
Q 012095 208 T 208 (471)
Q Consensus 208 ~ 208 (471)
-
T Consensus 117 ~ 117 (296)
T PRK11761 117 K 117 (296)
T ss_pred C
Confidence 4
No 456
>PRK08638 threonine dehydratase; Validated
Probab=42.75 E-value=1.1e+02 Score=30.11 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=44.5
Q ss_pred CCCCHHHHHHHHHHHH--HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLK--EENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~--~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v 206 (471)
+.|....|-+...... +..+ ...|+.++++..++.++..+-. .| -.|++|+..-..-...++.+|++++.+
T Consensus 53 ptGS~KdR~a~~~i~~~~~~~~----~~~vv~~SsGN~g~alA~~aa~-~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~ 127 (333)
T PRK08638 53 RTGSFKIRGAFNKLSSLTDAEK----RKGVVACSAGNHAQGVALSCAL-LGIDGKVVMPKGAPKSKVAATCGYGAEVVLH 127 (333)
T ss_pred ccCCcHHHHHHHHHHhccHHhc----CCeEEEeCCcHHHHHHHHHHHH-cCCCEEEEeCCCCcHHHHHHHHHcCCEEEEE
Confidence 3466666655443321 1111 2457778888888876665532 33 456666655555667899999999987
Q ss_pred c
Q 012095 207 P 207 (471)
Q Consensus 207 ~ 207 (471)
+
T Consensus 128 ~ 128 (333)
T PRK08638 128 G 128 (333)
T ss_pred C
Confidence 5
No 457
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=42.33 E-value=2.9e+02 Score=25.74 Aligned_cols=166 Identities=22% Similarity=0.261 Sum_probs=86.0
Q ss_pred HHHHHHHHHhcCCCeEEcCCCCCCCCC---hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE
Q 012095 83 ITDQATALAQAGVSVIRLAAGEPDFDT---PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL 159 (471)
Q Consensus 83 ~~~~~~~~~~~g~~~i~l~~g~~~~~~---p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~ 159 (471)
..+.+..+.+.|-+.|.++. |.-.| -+.+.++..+++.++.+ . ....++-+.+.+. ...+ =++
T Consensus 16 ~~~~~~~l~~~Gad~iel~i--PfsdPv~DG~~I~~a~~~al~~g~~---~-~~~~~~~~~vr~~----~~~p----v~l 81 (242)
T cd04724 16 TLEILKALVEAGADIIELGI--PFSDPVADGPVIQAASERALANGVT---L-KDVLELVKEIRKK----NTIP----IVL 81 (242)
T ss_pred HHHHHHHHHHCCCCEEEECC--CCCCCCCCCHHHHHHHHHHHHcCCC---H-HHHHHHHHHHhhc----CCCC----EEE
Confidence 34556677778889988886 33222 35677777778766431 1 1112333333322 2222 122
Q ss_pred EeC-Ch--HHHHHHHHHHhcCCC-CeEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 160 VSN-GA--KQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 160 it~-G~--~~al~~~~~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
++- +- +.++...+..+.+-| |.|++++-.+. .+...++.+|.+.+.+=. + . -..+.++..+......|
T Consensus 82 m~y~n~~~~~G~~~fi~~~~~aG~~giiipDl~~ee~~~~~~~~~~~g~~~i~~i~-P-~---T~~~~i~~i~~~~~~~v 156 (242)
T cd04724 82 MGYYNPILQYGLERFLRDAKEAGVDGLIIPDLPPEEAEEFREAAKEYGLDLIFLVA-P-T---TPDERIKKIAELASGFI 156 (242)
T ss_pred EEecCHHHHhCHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeC-C-C---CCHHHHHHHHhhCCCCE
Confidence 222 21 112344455555566 78888764332 233456778887655321 1 1 25677777765455666
Q ss_pred EEcCCCCCcccC--CCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 233 ILCSPSNPTGSV--YPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 233 ~i~~p~NPtG~~--~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
++.+-+--||.. ...+ ..+.++.++++.++.|++|
T Consensus 157 y~~s~~g~tG~~~~~~~~-~~~~i~~lr~~~~~pI~vg 193 (242)
T cd04724 157 YYVSRTGVTGARTELPDD-LKELIKRIRKYTDLPIAVG 193 (242)
T ss_pred EEEeCCCCCCCccCCChh-HHHHHHHHHhcCCCcEEEE
Confidence 654444445542 3333 4344444444436777776
No 458
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=42.07 E-value=68 Score=27.26 Aligned_cols=57 Identities=26% Similarity=0.284 Sum_probs=40.1
Q ss_pred CCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHH-HHHHHHHHHHhCCCe-EEEEccCCC
Q 012095 216 LDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKN-LLDEIARIVAKHPRL-LVLSDEIYE 272 (471)
Q Consensus 216 ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~-~l~~i~~l~~~~~~~-~ii~De~y~ 272 (471)
.+.+.+.+.+.+ .+..|++--|.|+.|...+.. ..+++++..++.-++ +++.||-..
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 488899888865 678888999999999888754 356777776653144 344566443
No 459
>PRK06450 threonine synthase; Validated
Probab=41.92 E-value=3.5e+02 Score=26.65 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=56.8
Q ss_pred CCCCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 130 PNAGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.+.|....|-+....... ..| ...|+..+++..+...+..+- ..-.-.|++|.-.-..-...++.+|++++.++
T Consensus 75 nPTGSfKDRga~~~i~~a~~~g----~~~vv~aSsGN~g~slA~~aa~~G~~~~i~vP~~~~~~k~~~i~~~GA~vi~v~ 150 (338)
T PRK06450 75 NPTGSYKDRGSVTLISYLAEKG----IKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIESYGAEVVRVR 150 (338)
T ss_pred CCcCCCHHHHHHHHHHHHHHcC----CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 345766666555433221 233 246777777777777655543 22234566766554455578899999999887
Q ss_pred CCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
- +.++..++.. +...+++.+..||-
T Consensus 151 ~--------~~~~~~~~a~-~~g~~~~~~~~np~ 175 (338)
T PRK06450 151 G--------SREDVAKAAE-NSGYYYASHVLQPQ 175 (338)
T ss_pred C--------CHHHHHHHHH-hcCeEeccCCCCcc
Confidence 3 2333333322 23445665656664
No 460
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=41.62 E-value=1.7e+02 Score=22.79 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=46.5
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 187 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
.....|...++..|++.+.. ..++++.-....|+..+. ++.+|++.. ...+.+-...+-+.|+++ ++.++
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~-~aD~VIv~t------~~vsH~~~~~vk~~akk~-~ip~~ 79 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIK-KADLVIVFT------DYVSHNAMWKVKKAAKKY-GIPII 79 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcC-CCCEEEEEe------CCcChHHHHHHHHHHHHc-CCcEE
Confidence 34456788899999998888 223443334445777665 455555421 123456688899999999 88877
Q ss_pred E
Q 012095 267 S 267 (471)
Q Consensus 267 ~ 267 (471)
.
T Consensus 80 ~ 80 (97)
T PF10087_consen 80 Y 80 (97)
T ss_pred E
Confidence 4
No 461
>PLN00191 enolase
Probab=41.24 E-value=92 Score=32.20 Aligned_cols=98 Identities=15% Similarity=0.077 Sum_probs=60.7
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChH-HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 163 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
.+.+++. .+..|+++-+.+.+++|....-. ...++... ..+|+-.++.+.-+++.+++.+..+..-++..-++. .
T Consensus 296 s~~e~i~-~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q-i 371 (457)
T PLN00191 296 SGDELID-LYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ-I 371 (457)
T ss_pred CHHHHHH-HHHHHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc-c
Confidence 4555555 45566666678899999865433 33333332 223333334444679999999877654444444444 3
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
|. ..+..+++++|+++ ++.+++-
T Consensus 372 GG---ITea~~~a~lA~~~-G~~~~is 394 (457)
T PLN00191 372 GT---VTESIEAVKMSKAA-GWGVMTS 394 (457)
T ss_pred CC---HHHHHHHHHHHHHC-CCEEEeC
Confidence 43 33477899999999 8888753
No 462
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=41.21 E-value=75 Score=29.06 Aligned_cols=99 Identities=9% Similarity=0.064 Sum_probs=59.2
Q ss_pred HHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 218 ~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
++.+++++.....++-+=.-+..+-.. .+..+++.++|++| ++.+|+++-+.--.--+.. -..+.. ..+-+
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~-~v~liINd~~dlA~~~~Ad---GVHlGq---~D~~~ 94 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKY-GVPLIINDRVDLALAVGAD---GVHLGQ---DDMPL 94 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHh-CCeEEecCcHHHHHhCCCC---EEEcCC---cccch
Confidence 788999998887777665444433222 56678999999999 8988887655421100110 011111 11223
Q ss_pred ecCCcccCccchhheeeEcCHHHHHHHHH
Q 012095 298 NGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~~~~i~~l~~ 326 (471)
.-..|.++ ++..+|+-+-+.+-.....+
T Consensus 95 ~~ar~~~~-~~~iIG~S~h~~eea~~A~~ 122 (211)
T COG0352 95 AEARELLG-PGLIIGLSTHDLEEALEAEE 122 (211)
T ss_pred HHHHHhcC-CCCEEEeecCCHHHHHHHHh
Confidence 34557787 88889987665554444443
No 463
>PRK05867 short chain dehydrogenase; Provisional
Probab=40.73 E-value=2.9e+02 Score=25.36 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=36.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+...+++|.|+...-..+.+.|.+.|..|++..-.-...... ++..+.++..+..|. -|.+.+++.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~ 77 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV-----SQHQQVTSML 77 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHHH
Confidence 334566666655545566777788898877654332222222 223355666666543 2555555544
No 464
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=40.65 E-value=3.1e+02 Score=25.56 Aligned_cols=158 Identities=13% Similarity=0.136 Sum_probs=80.3
Q ss_pred HHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEe--CC
Q 012095 87 ATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVS--NG 163 (471)
Q Consensus 87 ~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it--~G 163 (471)
+..+.+. -+.|-|+.--++... -+.+.++..+++.++. .++-+++.+. ...++ ++.+ +-
T Consensus 24 ~~~l~~~-ad~iElgip~sdp~adG~~i~~~~~~a~~~g~---------~~~v~~vr~~----~~~Pl----~lM~y~n~ 85 (244)
T PRK13125 24 IIGLVEL-VDILELGIPPKYPKYDGPVIRKSHRKVKGLDI---------WPLLEEVRKD----VSVPI----ILMTYLED 85 (244)
T ss_pred HHHHHhh-CCEEEECCCCCCCCCCCHHHHHHHHHHHHcCc---------HHHHHHHhcc----CCCCE----EEEEecch
Confidence 3334333 667777773333221 3566677666665433 3444444332 22222 2221 11
Q ss_pred hHHHHHHHHHHhcCCC-CeEEEcCCCCC------ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 AKQSILQAVLAVCSPG-DEVIIPAPFWV------SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~~~al~~~~~~l~~~g-d~Vlv~~p~y~------~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
-.......+..+.+.| |.|++++-.+. .+...++..|.++...= .+. -+.+.++..+......+++ +
T Consensus 86 ~~~~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v-~p~----T~~e~l~~~~~~~~~~l~m-s 159 (244)
T PRK13125 86 YVDSLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFT-SPK----FPDLLIHRLSKLSPLFIYY-G 159 (244)
T ss_pred hhhCHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEE-CCC----CCHHHHHHHHHhCCCEEEE-E
Confidence 1223333444555556 88888752221 23456788899875432 222 2678888877766666666 5
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
-++-||..+..+-.+.+.++.+..++..|++|
T Consensus 160 v~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~ 191 (244)
T PRK13125 160 LRPATGVPLPVSVERNIKRVRNLVGNKYLVVG 191 (244)
T ss_pred eCCCCCCCchHHHHHHHHHHHHhcCCCCEEEe
Confidence 56667776665544444444332212444544
No 465
>PRK06815 hypothetical protein; Provisional
Probab=40.48 E-value=3.1e+02 Score=26.63 Aligned_cols=52 Identities=12% Similarity=0.003 Sum_probs=34.2
Q ss_pred cEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 157 QILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.++..+++..+..++..+- +.-.-.|+++...-..-...++.+|++++.++-
T Consensus 70 ~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 70 GVITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred eEEEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 4777777777776555443 222245666665544556788999999999974
No 466
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=40.24 E-value=84 Score=31.03 Aligned_cols=71 Identities=13% Similarity=0.221 Sum_probs=47.2
Q ss_pred CCCCeEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC-CCCCcccCCCHHHHHHHH
Q 012095 177 SPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS-PSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~-p~NPtG~~~~~~~l~~i~ 254 (471)
+++..|++-+-..- +....+...|+++..||.+ -+.+++.+. ++..|+|+| |.+|.-... .++.|-
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~---~pDGiflSNGPGDP~~~~~---~i~~ik 244 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL---NPDGIFLSNGPGDPAPLDY---AIETIK 244 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh---CCCEEEEeCCCCChhHHHH---HHHHHH
Confidence 34567777776554 6667777889999999974 367776654 788999854 788843222 255555
Q ss_pred HHHHh
Q 012095 255 RIVAK 259 (471)
Q Consensus 255 ~l~~~ 259 (471)
++..+
T Consensus 245 ~l~~~ 249 (368)
T COG0505 245 ELLGT 249 (368)
T ss_pred HHhcc
Confidence 55543
No 467
>PRK04296 thymidine kinase; Provisional
Probab=38.69 E-value=1.1e+02 Score=27.31 Aligned_cols=90 Identities=11% Similarity=0.100 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc---cCCcEEEEcCCC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSPS 238 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---~~~~~i~i~~p~ 238 (471)
+.++..+.+ +...|..|++..|.+.. ....+...|..+..+.. ...+++.+.+. .+..+|+|..-+
T Consensus 17 T~~l~~~~~-~~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq 88 (190)
T PRK04296 17 TELLQRAYN-YEERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ 88 (190)
T ss_pred HHHHHHHHH-HHHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc
Confidence 455554443 44567787777664322 22334444533322111 12333333332 256677776664
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
.++.+++.++.+.++.. ++.||+=
T Consensus 89 -----~l~~~~v~~l~~~l~~~-g~~vi~t 112 (190)
T PRK04296 89 -----FLDKEQVVQLAEVLDDL-GIPVICY 112 (190)
T ss_pred -----cCCHHHHHHHHHHHHHc-CCeEEEE
Confidence 46677788888887777 7766654
No 468
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=38.20 E-value=2.6e+02 Score=25.58 Aligned_cols=97 Identities=22% Similarity=0.197 Sum_probs=56.4
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEE---EcCC----CC--C-----ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 159 LVSNGAKQSILQAVLAVCSPGDEVI---IPAP----FW--V-----SYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 159 ~it~G~~~al~~~~~~l~~~gd~Vl---v~~p----~y--~-----~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
++.+|+..+..++..+. +.|..|. +..+ .| + .....++..|.....+.++.... ...+.+.++
T Consensus 2 vl~SGGkDS~~al~~a~-~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~--~~~~~l~~~ 78 (218)
T TIGR03679 2 ALYSGGKDSNYALYKAL-EEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKE--KEVEDLKGA 78 (218)
T ss_pred eeecCcHHHHHHHHHHH-HcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCCh--HHHHHHHHH
Confidence 56678887777555444 4675542 2222 11 1 12345678888877777652111 123334444
Q ss_pred hc----cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 225 LT----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 225 l~----~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+. .....|+ +|...+......+-++|.+. ++.++
T Consensus 79 l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~-gl~~~ 116 (218)
T TIGR03679 79 LKELKREGVEGIV-------TGAIASRYQKSRIERICEEL-GLKVF 116 (218)
T ss_pred HHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhC-CCeEE
Confidence 32 2455666 58888877777777888887 77665
No 469
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=38.04 E-value=1.2e+02 Score=29.82 Aligned_cols=75 Identities=16% Similarity=0.228 Sum_probs=50.6
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
.-.|.+|.+.++.-..++++++..... -.+-+.-++. +-|-|++.-| ..++.++.++|++.|+++ ++.+
T Consensus 58 ~k~y~syEeLakd~~vDvVyi~~~~~q----H~evv~l~l~-~~K~VL~EKP-----la~n~~e~~~iveaA~~r-gv~~ 126 (351)
T KOG2741|consen 58 PKAYGSYEELAKDPEVDVVYISTPNPQ----HYEVVMLALN-KGKHVLCEKP-----LAMNVAEAEEIVEAAEAR-GVFF 126 (351)
T ss_pred CccccCHHHHhcCCCcCEEEeCCCCcc----HHHHHHHHHH-cCCcEEeccc-----ccCCHHHHHHHHHHHHHc-CcEE
Confidence 347889999999998999999874211 2232333333 3454665555 356788999999999998 8665
Q ss_pred EEccCCC
Q 012095 266 LSDEIYE 272 (471)
Q Consensus 266 i~De~y~ 272 (471)
+ |..|.
T Consensus 127 m-eg~~~ 132 (351)
T KOG2741|consen 127 M-EGLWW 132 (351)
T ss_pred E-eeeee
Confidence 5 55544
No 470
>PRK08278 short chain dehydrogenase; Provisional
Probab=37.90 E-value=3.4e+02 Score=25.36 Aligned_cols=76 Identities=12% Similarity=0.157 Sum_probs=41.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-------hH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-------YP---EMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-------~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..+++|.|+...-..+.+.|.+.|..|++....... .. ..++..|.++..+..|. -+.+.+++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~-----~~~~~i~~~~ 81 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDV-----RDEDQVAAAV 81 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHH
Confidence 456666665554456677778888777765433221 11 12334566676666553 2566666555
Q ss_pred cc------CCcEEEEcC
Q 012095 226 TE------KSRLLILCS 236 (471)
Q Consensus 226 ~~------~~~~i~i~~ 236 (471)
.. +...++.+.
T Consensus 82 ~~~~~~~g~id~li~~a 98 (273)
T PRK08278 82 AKAVERFGGIDICVNNA 98 (273)
T ss_pred HHHHHHhCCCCEEEECC
Confidence 32 455555443
No 471
>PRK05876 short chain dehydrogenase; Provisional
Probab=37.67 E-value=3e+02 Score=25.89 Aligned_cols=67 Identities=9% Similarity=-0.001 Sum_probs=37.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
...+++|.|+...-..+.+.|...|..|++.+-.-....... +..|.++..+.+|-. |.+++++.+.
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~ 75 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR-----HREEVTHLAD 75 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHHHH
Confidence 345677666655555667777888877776542222222222 234666766766532 5566665543
No 472
>PRK08813 threonine dehydratase; Provisional
Probab=37.63 E-value=2.4e+02 Score=28.07 Aligned_cols=75 Identities=12% Similarity=-0.028 Sum_probs=47.6
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
..|....|-+..........- ....|+..+++..++.++..+- +.-.-.|++|.-.-..-...++.+|++++.++
T Consensus 59 ptGSfK~RgA~~~l~~a~~~~--~~~~VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g 134 (349)
T PRK08813 59 RTGSYKVRGALNALLAGLERG--DERPVICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHG 134 (349)
T ss_pred CcCCCHHHHHHHHHHHHHHcC--CCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 457778887776554322110 1124777788888887665543 22224677777555566678899999999885
No 473
>smart00642 Aamy Alpha-amylase domain.
Probab=37.62 E-value=1.1e+02 Score=26.75 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCcc
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHI 274 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~ 274 (471)
+.++++++++-|+++ ++-||.|-+..+.
T Consensus 68 t~~d~~~lv~~~h~~-Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHAR-GIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEECCCCC
Confidence 568999999999999 9999999888763
No 474
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=37.55 E-value=2.9e+02 Score=28.09 Aligned_cols=96 Identities=13% Similarity=0.052 Sum_probs=46.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
....+++|.|+...-..+...+.+.|..|++..-.-..........+..+..+..|. -|.+.+.+.+. +..+++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv-----sd~~~v~~~l~-~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQV-----GQEAALAELLE-KVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeC-----CCHHHHHHHhC-CCCEEE
Confidence 345667765555544556667778887776543221111111111122233333322 15566666554 456555
Q ss_pred EcCCCCCcccCCCHHHHHHHHHH
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
.+...++.+ ..+.+++++..++
T Consensus 251 nnAGi~~~~-~~s~e~~~~~~~v 272 (406)
T PRK07424 251 INHGINVHG-ERTPEAINKSYEV 272 (406)
T ss_pred ECCCcCCCC-CCCHHHHHHHHHH
Confidence 544444433 4565666555443
No 475
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=36.84 E-value=3.9e+02 Score=25.63 Aligned_cols=87 Identities=13% Similarity=0.252 Sum_probs=46.3
Q ss_pred EEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEE
Q 012095 158 ILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLL 232 (471)
Q Consensus 158 i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i 232 (471)
|+...| ..+++..+- ...+-| |.|++..|.|....+- + -.+.+++.... +.-++
T Consensus 76 viagvg~~~t~~ai~~a~-~a~~~Gad~v~v~~P~y~~~~~~-----------------~---l~~~f~~va~a~~lPv~ 134 (293)
T PRK04147 76 LIAQVGSVNTAEAQELAK-YATELGYDAISAVTPFYYPFSFE-----------------E---ICDYYREIIDSADNPMI 134 (293)
T ss_pred EEecCCCCCHHHHHHHHH-HHHHcCCCEEEEeCCcCCCCCHH-----------------H---HHHHHHHHHHhCCCCEE
Confidence 555554 445554333 333455 8888888887543210 0 11222222221 23445
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
+.++|. .||..++.+.+.+| + ++|++.-|=|..
T Consensus 135 iYn~P~-~tg~~l~~~~l~~L---~-~~pnvvgiK~s~ 167 (293)
T PRK04147 135 VYNIPA-LTGVNLSLDQFNEL---F-TLPKVIGVKQTA 167 (293)
T ss_pred EEeCch-hhccCCCHHHHHHH---h-cCCCEEEEEeCC
Confidence 556664 38999996665544 4 356787777754
No 476
>PRK05872 short chain dehydrogenase; Provisional
Probab=36.76 E-value=3e+02 Score=26.23 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=37.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
....++||.|+...-..+.+.|.+.|-.|++..-.-.......+.. +.++..+.+|. -|.+++++.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-----~d~~~v~~~~ 76 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV-----TDLAAMQAAA 76 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-----CCHHHHHHHH
Confidence 4456777766665556667777888877776554322223333333 34555554442 2556665554
No 477
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=36.75 E-value=2.5e+02 Score=28.62 Aligned_cols=93 Identities=13% Similarity=0.188 Sum_probs=50.6
Q ss_pred CcEEEeCChHHHHHHHHHHhc---------CCCCeEEEcCCCCCChHH---------HHHHcCCEEEE-ecCCCCCCCcC
Q 012095 156 DQILVSNGAKQSILQAVLAVC---------SPGDEVIIPAPFWVSYPE---------MARIADATPVI-LPTRISENFLL 216 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~---------~~gd~Vlv~~p~y~~~~~---------~~~~~G~~~~~-v~~~~~~~~~l 216 (471)
+-|++++|++......+.-++ ++||.|++..+.++++.. .....|+++.. +.+. .+ -
T Consensus 287 ~~vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~h~S-gH---a 362 (422)
T TIGR00649 287 NYLIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGARVIKRIHVS-GH---A 362 (422)
T ss_pred cEEEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCEEEeceEec-CC---C
Confidence 456777776654443443332 377999999888887661 12235666543 2221 11 3
Q ss_pred CHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 217 DPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 217 d~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
+-++|...++. +|+.++-.+.- ...+.+.++++++.
T Consensus 363 ~~~dl~~~i~~~~Pk~~ipvHge--------~~~~~~~~~~a~~~ 399 (422)
T TIGR00649 363 SQEDHKLLLRLLKPKYIIPVHGE--------YRMLINHTKLAEEE 399 (422)
T ss_pred CHHHHHHHHHHhCCCEEEecCCc--------HHHHHHHHHHHHHc
Confidence 55555554432 56755533321 22366667777655
No 478
>PRK06500 short chain dehydrogenase; Provisional
Probab=36.51 E-value=3.3e+02 Score=24.73 Aligned_cols=55 Identities=13% Similarity=0.121 Sum_probs=30.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
..+++|.++...-..+.+.|.+.|..|++..-.-.......+..|.++..+.++.
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~ 61 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADA 61 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecC
Confidence 3566665555544556777778887776554322222233344566666666543
No 479
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=36.50 E-value=3.1e+02 Score=25.21 Aligned_cols=76 Identities=9% Similarity=0.008 Sum_probs=42.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~ 229 (471)
..++||.|+...=..+.+.|.+.|-+|++.+..-..........+.++..+..|. -|.+.+++++.. +.
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDV-----TRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4566666555544566777788898877765544333333444444566666543 255566555432 45
Q ss_pred cEEEEcC
Q 012095 230 RLLILCS 236 (471)
Q Consensus 230 ~~i~i~~ 236 (471)
.+++.+.
T Consensus 82 d~li~~a 88 (257)
T PRK07067 82 DILFNNA 88 (257)
T ss_pred CEEEECC
Confidence 5555443
No 480
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=36.42 E-value=3.8e+02 Score=25.43 Aligned_cols=36 Identities=17% Similarity=0.369 Sum_probs=21.8
Q ss_pred cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 230 RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
-+++.++|.. ||..++.+.+++|++ +|++.-|=|..
T Consensus 128 pi~lYn~P~~-~g~~ls~~~~~~L~~----~p~v~giK~s~ 163 (284)
T cd00950 128 PVILYNVPGR-TGVNIEPETVLRLAE----HPNIVGIKEAT 163 (284)
T ss_pred CEEEEEChhH-hCCCCCHHHHHHHhc----CCCEEEEEECC
Confidence 3455555543 789999666665543 24776666543
No 481
>PRK07409 threonine synthase; Validated
Probab=36.36 E-value=4.4e+02 Score=26.08 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=54.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHH-HHHHcCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGI-NAIREGFTRYTPNAGTLELRSAICHKLKE-ENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~-~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.+.|..|..++-..+.+..... +.+-+ .-.. .+.|....|.+..-.... ..| ...|+..+++..++.++..
T Consensus 23 ~~~~l~~g~TPl~~~~~l~~~~g~~i~~K-~E~~-nptGSfKdR~a~~~l~~a~~~g----~~~iv~aSsGN~g~alA~~ 96 (353)
T PRK07409 23 PVVTLGEGNTPLIPAPNLSELLGVEVYVK-YEGL-NPTGSFKDRGMTMAVTKAKEEG----AKAVICASTGNTSASAAAY 96 (353)
T ss_pred CcccCCCCCCCEEEchhhHHHhCCeEEEE-ecCC-CCccchHHHHHHHHHHHHHHCC----CCEEEEECCcHHHHHHHHH
Confidence 45778877755433222222110 11101 1122 235666666554432221 122 2467777777777765554
Q ss_pred HhcCCC--CeEEEcCCCC-CChHHHHHHcCCEEEEec
Q 012095 174 AVCSPG--DEVIIPAPFW-VSYPEMARIADATPVILP 207 (471)
Q Consensus 174 ~l~~~g--d~Vlv~~p~y-~~~~~~~~~~G~~~~~v~ 207 (471)
+- ..| -.|++|...- ..-...++.+|++++.++
T Consensus 97 a~-~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~ 132 (353)
T PRK07409 97 AA-RAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQID 132 (353)
T ss_pred HH-HcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEEC
Confidence 43 234 3456665422 334567789999999886
No 482
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=36.31 E-value=3.4e+02 Score=24.89 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=19.9
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
...+++|.|+...-..+.+.|.+.|..|++.
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~ 37 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVL 37 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEE
Confidence 3456666665554456677778888777653
No 483
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=36.15 E-value=1.6e+02 Score=27.57 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=56.0
Q ss_pred CcEEEeCChHHHH-HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcC-CEEEEecCCCCCCCcCCHHHHHhhhcc-----C
Q 012095 156 DQILVSNGAKQSI-LQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLTE-----K 228 (471)
Q Consensus 156 ~~i~it~G~~~al-~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~ 228 (471)
..|++.+|++.++ ..+.+.|.+.|-.|++..-.-.-...++...+ .++..+.+|- -|.+.+++.+.. .
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-----tD~~~~~~~i~~~~~~~g 80 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV-----TDRAAVEAAIEALPEEFG 80 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeecc-----CCHHHHHHHHHHHHHhhC
Confidence 3577777877777 45567788899777776655445566677777 3455555442 266666665532 1
Q ss_pred CcEEEEcCCCCCcccCC---CHHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTGSVY---PKNLLDEIARI 256 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~---~~~~l~~i~~l 256 (471)
.--+++||-.-.-|..+ ..++|+..++.
T Consensus 81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~ 111 (246)
T COG4221 81 RIDILVNNAGLALGDPLDEADLDDWDRMIDT 111 (246)
T ss_pred cccEEEecCCCCcCChhhhCCHHHHHHHHHH
Confidence 22355666644344444 44555555543
No 484
>PRK06483 dihydromonapterin reductase; Provisional
Probab=36.06 E-value=3.3e+02 Score=24.61 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=27.0
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEe
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVIL 206 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v 206 (471)
.+++|.|+...-..+.+.|.+.|..|++..-.-.......+..|+..+..
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~ 53 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQA 53 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEc
Confidence 46666655554455666777888777665433222333334445544333
No 485
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=35.97 E-value=4.2e+02 Score=25.80 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=64.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC--C-eEEEcCCCCCChHHHHHH-cC-CEEEEecCCCCCCCcCCHHHHHhhhcc-CCc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPG--D-EVIIPAPFWVSYPEMARI-AD-ATPVILPTRISENFLLDPKVLESKLTE-KSR 230 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~g--d-~Vlv~~p~y~~~~~~~~~-~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~ 230 (471)
.+++|.|+-=.-...++.+++.. + .+.+..-+|.+....+.. .+ .+..++..+. -|.+.+.+.+.+ ++.
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI-----~D~~~v~~~~~~~~~D 76 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDI-----CDRELVDRLFKEYQPD 76 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccc-----cCHHHHHHHHHhcCCC
Confidence 46777665544455566665433 4 355777899887765443 33 2566666543 267788887765 455
Q ss_pred EEE-EcC-CCCCcccCCCHHH-------HHHHHHHHHhCCC-----eEEEEccCCCccccC
Q 012095 231 LLI-LCS-PSNPTGSVYPKNL-------LDEIARIVAKHPR-----LLVLSDEIYEHIIYA 277 (471)
Q Consensus 231 ~i~-i~~-p~NPtG~~~~~~~-------l~~i~~l~~~~~~-----~~ii~De~y~~~~~~ 277 (471)
+|+ +.. -|.---..-|... -..|.+.++++ . +.|=.||+|+++..+
T Consensus 77 ~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTDEVYG~l~~~ 136 (340)
T COG1088 77 AVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTDEVYGDLGLD 136 (340)
T ss_pred eEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccccccccccCC
Confidence 444 211 1211111111111 24567777777 4 345579999998765
No 486
>PRK08339 short chain dehydrogenase; Provisional
Probab=35.89 E-value=3.2e+02 Score=25.48 Aligned_cols=65 Identities=9% Similarity=0.098 Sum_probs=33.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..++||.|+...-..+.+.|.+.|..|++..-.-.......+ ..+.++..+..|.. |.+++++.+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~ 77 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLT-----KREDLERTV 77 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCC-----CHHHHHHHH
Confidence 445666555544455677788889777765432222222221 12455555655432 445555544
No 487
>PRK07048 serine/threonine dehydratase; Validated
Probab=35.53 E-value=1.9e+02 Score=28.27 Aligned_cols=53 Identities=9% Similarity=0.011 Sum_probs=34.6
Q ss_pred CcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 156 DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
..|+..+++..++.++..+- +.-.-.|+++...-..-...++.+|++++.++-
T Consensus 73 ~~vv~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~ 126 (321)
T PRK07048 73 AGVVTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDR 126 (321)
T ss_pred CcEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 35776777777776655543 222245666665544455678899999999873
No 488
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=35.49 E-value=2.9e+02 Score=25.44 Aligned_cols=67 Identities=4% Similarity=0.040 Sum_probs=37.4
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
...+++|.|+...-..+.+.|++.|-.|++....-. ......+..+.++..+..|. -|.+.+++.+.
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 75 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL-----IQQKDIDSIVS 75 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC-----CCHHHHHHHHH
Confidence 345666666665556677778889988776432110 11122344566776666653 25555655543
No 489
>PRK08862 short chain dehydrogenase; Provisional
Probab=35.32 E-value=3.1e+02 Score=25.02 Aligned_cols=66 Identities=6% Similarity=0.010 Sum_probs=37.6
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
...+++|.|+...-..+...|.+.|..|++..-.-...... ++..|.+++.+.+|. -|.+.+++.+
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~-----~~~~~~~~~~ 73 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD-----FSQESIRHLF 73 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC-----CCHHHHHHHH
Confidence 34566666666555566677888998887754432222222 233466666666643 2556665544
No 490
>PF09885 DUF2112: Uncharacterized protein conserved in archaea (DUF2112); InterPro: IPR012356 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.01 E-value=93 Score=25.95 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=22.1
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 440 IRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 440 iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+-+.+..++++...++.+|.++|+.+
T Consensus 118 Lel~YP~~~ee~~~~V~~I~~FL~~L 143 (143)
T PF09885_consen 118 LELKYPTNEEEAIDFVNKINDFLKSL 143 (143)
T ss_pred EEeeCCCChHHHHHHHHHHHHHHhcC
Confidence 56777789999999999999999753
No 491
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=34.78 E-value=3.7e+02 Score=25.08 Aligned_cols=67 Identities=12% Similarity=0.080 Sum_probs=36.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
....+++|.|+...-..+...|.+.|..|++....-...... ....|.++..+..|.. |.+.+.+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 78 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVL-----DKESLEQAR 78 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHH
Confidence 344566666555444666777778887777654432222222 2234566666766532 445555443
No 492
>PRK07478 short chain dehydrogenase; Provisional
Probab=34.70 E-value=3.4e+02 Score=24.87 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=35.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..+++|.|+...=..+.+.|++.|..|++..-.-...... ++..|.++..++.|.. |.+.+++.+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 74 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVR-----DEAYAKALV 74 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHH
Confidence 4566665554444556677788887777654322222222 2334566767766532 556655554
No 493
>PRK06139 short chain dehydrogenase; Provisional
Probab=34.68 E-value=2.9e+02 Score=26.99 Aligned_cols=66 Identities=14% Similarity=0.187 Sum_probs=36.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
...++||.++...=..+.+.|.+.|..|++..-.-.... ..++..|.++..+++|-. |.+++++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~ 75 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVT-----DADQVKALA 75 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHH
Confidence 345556555444445566667788877776543222222 223345777766766532 566666554
No 494
>PRK08589 short chain dehydrogenase; Validated
Probab=34.64 E-value=3.8e+02 Score=24.99 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=35.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..++||.|+...=..+.+.|++.|..|++..-. ....... +..+.++..+.+|-. |.+.+++++
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 73 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDIS-----DEQQVKDFA 73 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecC-----CHHHHHHHH
Confidence 456666555554455677788889887766544 3332222 223556666665432 445554443
No 495
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=33.88 E-value=4.1e+02 Score=25.09 Aligned_cols=107 Identities=17% Similarity=0.262 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.+=|+.+.+...+..+ ..-.|+++.|+ .+++..+ +...+-| |.|++..|.|....+.
T Consensus 49 ~~Er~~l~~~~~~~~~---~~~~vi~gv~~~~~~~~i~~a-~~a~~~Gad~v~v~pP~y~~~~~~--------------- 109 (281)
T cd00408 49 DEERKEVIEAVVEAVA---GRVPVIAGVGANSTREAIELA-RHAEEAGADGVLVVPPYYNKPSQE--------------- 109 (281)
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEecCCccHHHHHHHH-HHHHHcCCCEEEECCCcCCCCCHH---------------
Confidence 3444555555444332 11235555543 2344432 2333445 8888888876542110
Q ss_pred CCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 211 SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
+ -.+.+.+.... +.-+++.++|.. ||..++.+.+.+|++ +|++.=|=|..
T Consensus 110 --~---~~~~~~~ia~~~~~pi~iYn~P~~-tg~~l~~~~~~~L~~----~~~v~giK~s~ 160 (281)
T cd00408 110 --G---IVAHFKAVADASDLPVILYNIPGR-TGVDLSPETIARLAE----HPNIVGIKDSS 160 (281)
T ss_pred --H---HHHHHHHHHhcCCCCEEEEECccc-cCCCCCHHHHHHHhc----CCCEEEEEeCC
Confidence 0 11112222221 334555666655 899999776665553 45777777765
No 496
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=33.75 E-value=78 Score=32.63 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=47.1
Q ss_pred HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCC---------cEEE--E-cCC--CCCcccCCCHHHHHHHHHHHH
Q 012095 193 PEMARIADATPVILPTRISENFLLDPKVLESKLTEKS---------RLLI--L-CSP--SNPTGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 193 ~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~---------~~i~--i-~~p--~NPtG~~~~~~~l~~i~~l~~ 258 (471)
.+.+..+..++...-+..+.+|.+..+.+.++..... ..++ . ..+ ..+.|-.+|++++++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3455667778877777767778877766655332110 0011 0 111 123466899999999999999
Q ss_pred hCCCeEEE
Q 012095 259 KHPRLLVL 266 (471)
Q Consensus 259 ~~~~~~ii 266 (471)
++ ++-||
T Consensus 108 ~r-gI~VI 114 (445)
T cd06569 108 AR-HIEVI 114 (445)
T ss_pred Hc-CCEEE
Confidence 99 88877
No 497
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=33.19 E-value=56 Score=35.04 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=33.6
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA 277 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~ 277 (471)
+..-.|++.-| ++++++++++-|+++ ++-||.|=+|.+|.-+
T Consensus 201 ~g~yAp~sryG---tPedfk~fVD~aH~~-GIgViLD~V~~HF~~d 242 (628)
T COG0296 201 TGYYAPTSRYG---TPEDFKALVDAAHQA-GIGVILDWVPNHFPPD 242 (628)
T ss_pred ceeccccccCC---CHHHHHHHHHHHHHc-CCEEEEEecCCcCCCC
Confidence 34445666555 577899999999999 9999999999997543
No 498
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=32.98 E-value=3.8e+02 Score=25.71 Aligned_cols=75 Identities=20% Similarity=0.332 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHH-hCCCCCC-CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKEE-NGLSYTP-DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~-~g~~~~~-~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.|....|.+........ .|. +.+ ..|+..+++..+..++..+-. -| -.|++|+..-..-...++.+|++++.++
T Consensus 35 tGS~K~R~a~~~v~~a~~~g~-~~~g~~vv~aSsGN~g~alA~~a~~-~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~ 112 (290)
T TIGR01138 35 AGSVKDRPALSMIVEAEKRGE-IKPGDVLIEATSGNTGIALAMIAAL-KGYRMKLLMPDNMSQERKAAMRAYGAELILVT 112 (290)
T ss_pred CccHHHHHHHHHHHHHHHcCC-CCCCCEEEEECCChHHHHHHHHHHH-cCCeEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 57777777665544322 332 122 457777788888876665532 33 3456666555556678999999999987
Q ss_pred C
Q 012095 208 T 208 (471)
Q Consensus 208 ~ 208 (471)
-
T Consensus 113 ~ 113 (290)
T TIGR01138 113 K 113 (290)
T ss_pred C
Confidence 4
No 499
>PRK05717 oxidoreductase; Validated
Probab=32.69 E-value=3.2e+02 Score=25.14 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=35.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
..+++|.|+...-..+.+.|++.|-.|++.+..-.......+..+.++..+.+|-. |.+.+++++
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~~~ 75 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVA-----DEAQVAAGV 75 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCC-----CHHHHHHHH
Confidence 45666655554445567777788877776543322223333444555666665432 455554433
No 500
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=32.60 E-value=1.3e+02 Score=29.40 Aligned_cols=70 Identities=10% Similarity=0.264 Sum_probs=46.3
Q ss_pred cCCCCCChHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHH-HhCC
Q 012095 185 PAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV-AKHP 261 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~-~~~~ 261 (471)
.-|+|.+..++.+.. .+-++.+|-. .-++.+++++....+.+++.+-+-| ..+..++.+++ +++
T Consensus 73 Gvpvy~sv~ea~~~~~~D~avI~VPa~------~v~dai~Ea~~aGI~~~ViiteGfp------e~d~~~l~~~~~~~~- 139 (317)
T PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPP------HAASAIIEAIEAEIPLVVCITEGIP------QHDMVKVKHALLSQN- 139 (317)
T ss_pred CccccCCHHHHhcccCCCEEEEecCHH------HHHHHHHHHHHcCCCEEEEECCCCc------hhhHHHHHHHHhhcC-
Confidence 789999999998874 4455566532 3678888888888888776544332 22234444555 457
Q ss_pred CeEEEE
Q 012095 262 RLLVLS 267 (471)
Q Consensus 262 ~~~ii~ 267 (471)
++.||=
T Consensus 140 g~rliG 145 (317)
T PTZ00187 140 KTRLIG 145 (317)
T ss_pred CCEEEC
Confidence 888883
Done!