Query 012095
Match_columns 471
No_of_seqs 313 out of 2765
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 21:31:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1b5p_A Protein (aspartate amin 100.0 2E-57 6.8E-62 457.5 40.7 380 68-463 4-383 (385)
2 1j32_A Aspartate aminotransfer 100.0 4.2E-55 1.4E-59 440.6 39.4 384 68-465 3-387 (388)
3 3h14_A Aminotransferase, class 100.0 2.8E-54 9.5E-59 435.1 39.5 376 68-466 5-383 (391)
4 2x5d_A Probable aminotransfera 100.0 3.7E-54 1.3E-58 437.5 38.8 386 68-466 10-399 (412)
5 1gd9_A Aspartate aminotransfer 100.0 1.2E-53 4.2E-58 430.0 40.5 380 68-466 3-387 (389)
6 3fvs_A Kynurenine--oxoglutarat 100.0 7.4E-54 2.5E-58 436.3 39.0 390 67-464 5-421 (422)
7 3b46_A Aminotransferase BNA3; 100.0 1.2E-54 4E-59 445.9 33.0 383 75-461 33-443 (447)
8 3aow_A Putative uncharacterize 100.0 1.1E-53 3.7E-58 438.6 38.3 379 63-466 49-446 (448)
9 1o4s_A Aspartate aminotransfer 100.0 2.5E-53 8.5E-58 428.2 39.3 375 67-463 13-387 (389)
10 3ele_A Amino transferase; RER0 100.0 5E-53 1.7E-57 426.8 38.2 373 67-466 3-397 (398)
11 3jtx_A Aminotransferase; NP_28 100.0 2.2E-53 7.6E-58 429.0 34.7 373 69-462 3-395 (396)
12 3dyd_A Tyrosine aminotransfera 100.0 3.1E-53 1.1E-57 432.8 35.7 391 63-466 23-425 (427)
13 1xi9_A Putative transaminase; 100.0 4.6E-53 1.6E-57 428.5 36.7 383 66-466 10-404 (406)
14 2o1b_A Aminotransferase, class 100.0 2.6E-53 9E-58 430.2 33.0 377 69-465 23-403 (404)
15 2dou_A Probable N-succinyldiam 100.0 1.1E-52 3.9E-57 421.1 36.8 367 75-462 4-375 (376)
16 1u08_A Hypothetical aminotrans 100.0 5.7E-52 2E-56 417.5 41.8 373 68-460 8-385 (386)
17 2o0r_A RV0858C (N-succinyldiam 100.0 1.4E-52 4.6E-57 425.8 37.3 382 68-468 3-399 (411)
18 3e2y_A Kynurenine-oxoglutarate 100.0 2.4E-52 8.4E-57 423.3 37.5 383 70-460 3-408 (410)
19 1yiz_A Kynurenine aminotransfe 100.0 4.2E-52 1.4E-56 424.4 39.2 390 66-463 13-427 (429)
20 3k7y_A Aspartate aminotransfer 100.0 5E-53 1.7E-57 426.9 30.8 367 68-464 4-404 (405)
21 2z61_A Probable aspartate amin 100.0 1.1E-51 3.9E-56 413.0 38.9 365 68-463 2-369 (370)
22 2r2n_A Kynurenine/alpha-aminoa 100.0 5.3E-52 1.8E-56 423.4 36.1 380 63-465 2-424 (425)
23 2gb3_A Aspartate aminotransfer 100.0 9.7E-52 3.3E-56 419.3 37.1 378 68-468 16-405 (409)
24 3qgu_A LL-diaminopimelate amin 100.0 8.4E-52 2.9E-56 424.8 34.9 375 67-465 38-440 (449)
25 3ezs_A Aminotransferase ASPB; 100.0 4.7E-52 1.6E-56 416.3 31.1 361 75-465 4-375 (376)
26 1bw0_A TAT, protein (tyrosine 100.0 1.7E-51 5.9E-56 418.1 35.4 391 64-467 4-415 (416)
27 3fdb_A Beta C-S lyase, putativ 100.0 1.1E-51 3.8E-56 413.7 33.1 352 92-465 20-376 (377)
28 3nra_A Aspartate aminotransfer 100.0 2.3E-51 7.9E-56 415.6 35.2 357 96-466 40-406 (407)
29 3ihj_A Alanine aminotransferas 100.0 5.7E-52 1.9E-56 430.9 31.0 393 68-466 28-494 (498)
30 3kax_A Aminotransferase, class 100.0 7.6E-51 2.6E-55 408.3 37.3 353 94-462 23-382 (383)
31 3dzz_A Putative pyridoxal 5'-p 100.0 1.1E-50 3.6E-55 408.3 38.4 358 93-466 25-390 (391)
32 2zc0_A Alanine glyoxylate tran 100.0 1.1E-50 3.9E-55 410.8 38.8 386 62-466 1-405 (407)
33 4dq6_A Putative pyridoxal phos 100.0 2.7E-50 9.4E-55 405.3 38.3 352 94-462 31-390 (391)
34 3tcm_A Alanine aminotransferas 100.0 1.5E-50 5.1E-55 420.7 37.5 355 110-466 108-495 (500)
35 3g0t_A Putative aminotransfera 100.0 1.2E-50 4E-55 414.5 35.8 372 74-464 22-436 (437)
36 1c7n_A Cystalysin; transferase 100.0 2E-50 7E-55 407.8 36.7 357 95-467 31-395 (399)
37 3t18_A Aminotransferase class 100.0 9.2E-51 3.1E-55 412.5 32.6 374 66-466 6-411 (413)
38 1d2f_A MALY protein; aminotran 100.0 5.6E-50 1.9E-54 403.5 37.0 353 96-466 29-390 (390)
39 3rq1_A Aminotransferase class 100.0 1.7E-50 5.7E-55 411.2 32.8 374 69-466 10-416 (418)
40 3ei9_A LL-diaminopimelate amin 100.0 4.8E-50 1.6E-54 409.7 36.2 375 66-465 24-428 (432)
41 1vp4_A Aminotransferase, putat 100.0 9.1E-51 3.1E-55 414.3 30.0 381 65-469 18-422 (425)
42 3l8a_A METC, putative aminotra 100.0 8.1E-50 2.8E-54 406.7 34.9 354 94-463 60-420 (421)
43 1v2d_A Glutamine aminotransfer 100.0 1.8E-49 6.2E-54 398.5 35.5 366 68-468 3-374 (381)
44 4f4e_A Aromatic-amino-acid ami 100.0 4E-50 1.4E-54 408.9 29.7 370 66-462 22-419 (420)
45 3asa_A LL-diaminopimelate amin 100.0 2.5E-49 8.6E-54 400.4 32.3 372 68-466 3-394 (400)
46 2x5f_A Aspartate_tyrosine_phen 100.0 1E-49 3.5E-54 407.0 29.4 352 94-466 46-430 (430)
47 2zyj_A Alpha-aminodipate amino 100.0 1.9E-48 6.4E-53 393.4 33.2 367 67-465 9-393 (397)
48 1iay_A ACC synthase 2, 1-amino 100.0 1.9E-48 6.4E-53 397.4 31.3 360 96-465 37-427 (428)
49 3get_A Histidinol-phosphate am 100.0 2.7E-48 9.1E-53 387.7 31.2 334 94-462 29-364 (365)
50 7aat_A Aspartate aminotransfer 100.0 3.1E-48 1.1E-52 392.3 28.6 366 70-462 5-400 (401)
51 3op7_A Aminotransferase class 100.0 9.3E-48 3.2E-52 385.1 29.7 328 115-467 46-373 (375)
52 3d6k_A Putative aminotransfera 100.0 2.8E-48 9.5E-53 395.6 26.3 356 85-466 23-419 (422)
53 3piu_A 1-aminocyclopropane-1-c 100.0 1.6E-47 5.6E-52 391.3 32.0 361 96-466 39-433 (435)
54 3ffh_A Histidinol-phosphate am 100.0 4.4E-47 1.5E-51 378.5 34.3 332 94-461 31-362 (363)
55 4eu1_A Mitochondrial aspartate 100.0 1.2E-48 4.1E-53 396.5 22.7 370 65-462 13-408 (409)
56 3fsl_A Aromatic-amino-acid ami 100.0 9.7E-48 3.3E-52 387.8 28.6 365 70-461 3-396 (397)
57 4h51_A Aspartate aminotransfer 100.0 1E-47 3.6E-52 388.2 28.2 368 68-467 17-419 (420)
58 3meb_A Aspartate aminotransfer 100.0 4E-48 1.4E-52 397.4 25.4 372 66-467 22-446 (448)
59 3ly1_A Putative histidinol-pho 100.0 5.3E-47 1.8E-51 376.5 32.6 336 93-464 14-351 (354)
60 3g7q_A Valine-pyruvate aminotr 100.0 3.8E-47 1.3E-51 386.0 30.6 352 94-466 30-414 (417)
61 3b1d_A Betac-S lyase; HET: PLP 100.0 3E-51 1E-55 413.3 0.0 352 96-463 32-391 (392)
62 1fg7_A Histidinol phosphate am 100.0 9.3E-47 3.2E-51 375.7 32.4 323 95-460 29-353 (356)
63 1ajs_A Aspartate aminotransfer 100.0 2E-47 6.8E-52 387.7 28.0 371 68-465 5-411 (412)
64 3if2_A Aminotransferase; YP_26 100.0 9.2E-47 3.2E-51 386.6 31.9 382 67-467 3-442 (444)
65 3ppl_A Aspartate aminotransfer 100.0 1E-47 3.6E-52 391.9 24.0 347 95-465 33-420 (427)
66 1yaa_A Aspartate aminotransfer 100.0 3.3E-47 1.1E-51 386.2 26.1 370 68-464 4-410 (412)
67 3ez1_A Aminotransferase MOCR f 100.0 3.4E-47 1.2E-51 387.4 23.6 347 95-466 25-416 (423)
68 3ftb_A Histidinol-phosphate am 100.0 2.6E-45 9E-50 365.1 35.6 332 93-463 24-359 (361)
69 1lc5_A COBD, L-threonine-O-3-p 100.0 1.4E-45 4.6E-50 368.1 33.3 337 93-466 22-361 (364)
70 3f6t_A Aspartate aminotransfer 100.0 7.2E-47 2.5E-51 395.6 24.6 357 96-465 104-525 (533)
71 2q7w_A Aspartate aminotransfer 100.0 1E-46 3.4E-51 380.3 24.3 365 70-461 3-395 (396)
72 2zy4_A L-aspartate beta-decarb 100.0 2.7E-46 9.3E-51 391.5 28.3 355 97-465 106-522 (546)
73 3euc_A Histidinol-phosphate am 100.0 3.9E-45 1.3E-49 365.0 33.6 332 95-463 30-366 (367)
74 3bwn_A AT1G70560, L-tryptophan 100.0 1.3E-46 4.5E-51 379.3 19.9 331 93-464 20-386 (391)
75 3cq5_A Histidinol-phosphate am 100.0 4E-44 1.4E-48 358.3 37.6 330 97-463 32-366 (369)
76 2hox_A ALLIIN lyase 1; cystein 100.0 7.6E-46 2.6E-50 377.8 21.3 330 95-464 56-424 (427)
77 3p1t_A Putative histidinol-pho 100.0 5.8E-44 2E-48 352.1 33.7 323 92-463 13-335 (337)
78 3hdo_A Histidinol-phosphate am 100.0 9.1E-44 3.1E-48 354.4 34.7 345 68-463 6-353 (360)
79 2ay1_A Aroat, aromatic amino a 100.0 7.2E-45 2.5E-49 366.6 26.2 362 70-461 3-392 (394)
80 3fkd_A L-threonine-O-3-phospha 100.0 3.7E-44 1.3E-48 355.7 29.1 327 93-465 13-342 (350)
81 1uu1_A Histidinol-phosphate am 100.0 2.2E-42 7.6E-47 341.0 26.4 314 96-461 20-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 2.4E-41 8.1E-46 341.4 31.4 338 93-467 41-394 (398)
83 1t3i_A Probable cysteine desul 100.0 3.2E-38 1.1E-42 320.1 27.6 335 94-466 26-414 (420)
84 2dr1_A PH1308 protein, 386AA l 100.0 2.2E-37 7.6E-42 310.4 29.6 322 108-466 30-380 (386)
85 3tqx_A 2-amino-3-ketobutyrate 100.0 2.2E-37 7.4E-42 312.0 29.1 335 93-466 41-397 (399)
86 1kmj_A Selenocysteine lyase; p 100.0 1.2E-37 4.1E-42 314.3 27.0 334 94-465 21-405 (406)
87 1e5e_A MGL, methionine gamma-l 100.0 1.2E-37 4.2E-42 315.1 25.6 315 97-465 20-395 (404)
88 1bs0_A Protein (8-amino-7-oxon 100.0 5.8E-37 2E-41 307.7 30.0 328 93-461 37-383 (384)
89 2w8t_A SPT, serine palmitoyltr 100.0 5.3E-37 1.8E-41 312.8 29.5 339 93-467 62-417 (427)
90 1vjo_A Alanine--glyoxylate ami 100.0 1.3E-37 4.5E-42 313.2 24.6 320 107-462 43-392 (393)
91 1fc4_A 2-amino-3-ketobutyrate 100.0 1.2E-36 4.1E-41 307.1 30.5 332 93-467 43-399 (401)
92 1eg5_A Aminotransferase; PLP-d 100.0 4.7E-37 1.6E-41 307.7 26.1 330 98-467 3-378 (384)
93 2bwn_A 5-aminolevulinate synth 100.0 2.2E-37 7.6E-42 312.6 23.2 335 94-465 45-400 (401)
94 3kki_A CAI-1 autoinducer synth 100.0 2.5E-36 8.6E-41 305.9 26.8 332 93-465 57-404 (409)
95 1elu_A L-cysteine/L-cystine C- 100.0 1.1E-36 3.8E-41 305.7 21.5 328 96-460 16-387 (390)
96 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.3E-37 4.5E-42 310.5 14.1 326 94-465 6-370 (371)
97 2huf_A Alanine glyoxylate amin 100.0 5.8E-36 2E-40 301.1 24.7 332 96-469 19-387 (393)
98 1sff_A 4-aminobutyrate aminotr 100.0 9.8E-37 3.3E-41 310.3 18.6 348 93-466 39-425 (426)
99 2ch1_A 3-hydroxykynurenine tra 100.0 2.8E-36 9.7E-41 303.7 21.6 330 100-467 20-385 (396)
100 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.3E-35 4.3E-40 305.0 25.3 366 70-466 8-432 (456)
101 4eb5_A Probable cysteine desul 100.0 2.2E-35 7.5E-40 295.4 26.3 332 99-466 3-374 (382)
102 2z9v_A Aspartate aminotransfer 100.0 1.3E-35 4.5E-40 298.4 24.7 333 97-468 9-374 (392)
103 3lvm_A Cysteine desulfurase; s 100.0 1.6E-35 5.6E-40 300.9 23.7 338 92-467 18-401 (423)
104 2aeu_A Hypothetical protein MJ 100.0 1E-34 3.5E-39 290.7 29.0 334 90-466 22-372 (374)
105 3zrp_A Serine-pyruvate aminotr 100.0 1.5E-34 5.2E-39 289.4 29.3 325 106-469 10-367 (384)
106 3f9t_A TDC, L-tyrosine decarbo 100.0 6.5E-35 2.2E-39 293.0 26.3 322 107-463 40-396 (397)
107 3cai_A Possible aminotransfera 100.0 6.1E-35 2.1E-39 295.1 25.9 328 96-460 26-404 (406)
108 1m32_A 2-aminoethylphosphonate 100.0 5E-35 1.7E-39 290.8 24.5 330 96-465 4-365 (366)
109 1iug_A Putative aspartate amin 100.0 3E-35 1E-39 291.2 22.5 321 106-467 9-350 (352)
110 4hvk_A Probable cysteine desul 100.0 1.3E-34 4.4E-39 289.4 26.7 330 99-466 3-374 (382)
111 1jg8_A L-ALLO-threonine aldola 100.0 4E-35 1.4E-39 290.1 22.6 325 96-465 4-346 (347)
112 1svv_A Threonine aldolase; str 100.0 7.8E-35 2.7E-39 288.8 24.3 333 95-465 13-358 (359)
113 3ruy_A Ornithine aminotransfer 100.0 9.2E-35 3.1E-39 292.6 24.2 326 93-462 34-391 (392)
114 2yrr_A Aminotransferase, class 100.0 4.5E-35 1.5E-39 289.6 20.6 318 106-464 8-352 (353)
115 1v72_A Aldolase; PLP-dependent 100.0 2.3E-34 7.9E-39 285.2 25.5 328 94-465 6-353 (356)
116 2dkj_A Serine hydroxymethyltra 100.0 1.6E-34 5.4E-39 292.0 24.8 336 95-464 23-387 (407)
117 3kgw_A Alanine-glyoxylate amin 100.0 4.5E-34 1.6E-38 286.8 27.3 329 105-468 30-391 (393)
118 2eh6_A Acoat, acetylornithine 100.0 9.3E-35 3.2E-39 290.6 22.1 320 93-461 26-374 (375)
119 3i4j_A Aminotransferase, class 100.0 4.4E-34 1.5E-38 291.4 27.2 360 93-466 27-429 (430)
120 2eo5_A 419AA long hypothetical 100.0 4.4E-34 1.5E-38 290.5 26.6 335 93-465 40-418 (419)
121 3nnk_A Ureidoglycine-glyoxylat 100.0 6.2E-34 2.1E-38 287.9 27.1 327 106-468 21-393 (411)
122 2ord_A Acoat, acetylornithine 100.0 1.1E-34 3.8E-39 292.6 21.1 329 93-464 38-396 (397)
123 3isl_A Purine catabolism prote 100.0 1.5E-33 5.1E-38 285.5 29.4 325 107-468 20-393 (416)
124 1b9h_A AHBA synthase, protein 100.0 1.8E-33 6E-38 282.8 28.2 322 102-464 4-387 (388)
125 2po3_A 4-dehydrase; external a 100.0 1.3E-32 4.5E-37 280.0 34.8 332 94-465 13-386 (424)
126 4adb_A Succinylornithine trans 100.0 6E-34 2.1E-38 287.7 24.7 334 93-467 37-402 (406)
127 1zod_A DGD, 2,2-dialkylglycine 100.0 8.6E-34 2.9E-38 289.4 24.4 350 93-465 41-432 (433)
128 1ax4_A Tryptophanase; tryptoph 100.0 6E-34 2.1E-38 293.3 23.3 369 70-466 9-442 (467)
129 3gju_A Putative aminotransfera 100.0 7.5E-33 2.6E-37 284.8 31.1 358 93-466 49-457 (460)
130 2rfv_A Methionine gamma-lyase; 100.0 2.8E-33 9.5E-38 282.6 26.5 320 98-460 23-395 (398)
131 3nx3_A Acoat, acetylornithine 100.0 4.3E-33 1.5E-37 280.7 27.4 334 93-464 34-394 (395)
132 2pb2_A Acetylornithine/succiny 100.0 4.2E-33 1.4E-37 283.3 27.4 332 93-465 55-418 (420)
133 3f0h_A Aminotransferase; RER07 100.0 4.7E-33 1.6E-37 278.1 27.1 330 97-464 20-373 (376)
134 3vax_A Putative uncharacterize 100.0 2.2E-34 7.6E-39 290.2 17.2 333 94-464 18-399 (400)
135 3ffr_A Phosphoserine aminotran 100.0 8.4E-33 2.9E-37 274.5 27.9 327 97-462 5-361 (362)
136 3dxv_A Alpha-amino-epsilon-cap 100.0 2.4E-33 8.4E-38 286.6 24.4 353 93-466 41-426 (439)
137 4ffc_A 4-aminobutyrate aminotr 100.0 2E-33 6.9E-38 288.4 22.8 357 93-467 62-451 (453)
138 1s0a_A Adenosylmethionine-8-am 100.0 1.8E-32 6.1E-37 279.4 29.5 340 93-466 41-425 (429)
139 4a6r_A Omega transaminase; tra 100.0 1E-32 3.4E-37 283.8 27.6 355 93-465 48-449 (459)
140 1ibj_A CBL, cystathionine beta 100.0 1.7E-33 5.9E-38 288.8 20.8 325 96-464 90-461 (464)
141 1w23_A Phosphoserine aminotran 100.0 5.6E-34 1.9E-38 283.2 16.6 325 96-464 3-359 (360)
142 2oga_A Transaminase; PLP-depen 100.0 1E-32 3.5E-37 278.5 25.8 326 95-467 30-398 (399)
143 1vef_A Acetylornithine/acetyl- 100.0 7.6E-33 2.6E-37 278.8 24.8 335 93-462 43-394 (395)
144 3a9z_A Selenocysteine lyase; P 100.0 6.1E-33 2.1E-37 282.9 24.1 333 95-468 17-431 (432)
145 3n5m_A Adenosylmethionine-8-am 100.0 2.9E-32 1E-36 279.7 28.4 354 93-464 47-451 (452)
146 3pj0_A LMO0305 protein; struct 100.0 3.7E-33 1.3E-37 277.3 20.3 328 95-461 13-358 (359)
147 2bkw_A Alanine-glyoxylate amin 100.0 8.8E-33 3E-37 276.8 23.1 330 96-465 5-384 (385)
148 3lws_A Aromatic amino acid bet 100.0 1.1E-32 3.8E-37 273.7 20.9 299 125-462 40-356 (357)
149 2c0r_A PSAT, phosphoserine ami 100.0 6.4E-33 2.2E-37 276.1 18.2 323 96-465 4-361 (362)
150 3oks_A 4-aminobutyrate transam 100.0 3E-32 1E-36 279.5 22.5 354 93-464 59-450 (451)
151 2c81_A Glutamine-2-deoxy-scyll 100.0 1.4E-30 4.8E-35 264.4 34.4 330 101-466 5-415 (418)
152 3mad_A Sphingosine-1-phosphate 100.0 6.6E-32 2.3E-36 281.6 24.6 327 112-466 115-470 (514)
153 2oat_A Ornithine aminotransfer 100.0 2.8E-31 9.7E-36 271.3 28.7 331 93-464 74-438 (439)
154 3l44_A Glutamate-1-semialdehyd 100.0 2.6E-32 8.8E-37 278.6 20.7 351 93-466 53-431 (434)
155 3mc6_A Sphingosine-1-phosphate 100.0 2.9E-31 9.9E-36 275.6 28.6 332 108-468 75-440 (497)
156 1z7d_A Ornithine aminotransfer 100.0 2.3E-31 7.8E-36 271.5 27.1 333 93-466 63-430 (433)
157 3dod_A Adenosylmethionine-8-am 100.0 1.3E-31 4.3E-36 274.7 25.0 352 93-466 42-444 (448)
158 1mdo_A ARNB aminotransferase; 100.0 6.5E-31 2.2E-35 264.3 29.5 322 96-465 9-386 (393)
159 2oqx_A Tryptophanase; lyase, p 100.0 1.4E-32 4.8E-37 283.1 17.3 370 70-466 7-443 (467)
160 1qz9_A Kynureninase; kynurenin 100.0 3E-31 1E-35 268.8 26.0 325 96-466 28-403 (416)
161 3tfu_A Adenosylmethionine-8-am 100.0 2.5E-31 8.5E-36 272.9 24.6 342 93-467 71-455 (457)
162 1wyu_B Glycine dehydrogenase s 100.0 5.3E-31 1.8E-35 271.9 26.0 348 82-464 49-440 (474)
163 3a8u_X Omega-amino acid--pyruv 100.0 2.1E-31 7.1E-36 273.1 22.8 342 93-465 48-447 (449)
164 3hmu_A Aminotransferase, class 100.0 5.1E-31 1.7E-35 271.6 25.3 351 93-465 53-452 (472)
165 3i5t_A Aminotransferase; pyrid 100.0 1.3E-30 4.5E-35 268.9 28.3 350 93-466 52-455 (476)
166 1rv3_A Serine hydroxymethyltra 100.0 5.1E-31 1.8E-35 272.5 24.0 361 68-464 21-430 (483)
167 2vi8_A Serine hydroxymethyltra 100.0 1.4E-30 4.9E-35 262.8 26.3 337 95-466 24-388 (405)
168 3n0l_A Serine hydroxymethyltra 100.0 3.1E-30 1.1E-34 261.3 28.5 335 96-465 26-389 (417)
169 3k28_A Glutamate-1-semialdehyd 100.0 4.9E-31 1.7E-35 268.8 22.0 347 93-466 51-428 (429)
170 3gbx_A Serine hydroxymethyltra 100.0 2.7E-30 9.3E-35 261.9 25.1 334 97-465 32-396 (420)
171 3uwc_A Nucleotide-sugar aminot 100.0 4.2E-30 1.4E-34 256.7 26.0 323 95-466 6-372 (374)
172 2fyf_A PSAT, phosphoserine ami 100.0 3.1E-30 1E-34 260.2 24.5 322 96-464 40-397 (398)
173 3ecd_A Serine hydroxymethyltra 100.0 1.2E-29 4.1E-34 257.5 28.5 360 68-465 9-397 (425)
174 2fnu_A Aminotransferase; prote 100.0 3E-29 1E-33 250.3 31.0 311 109-466 11-373 (375)
175 3fq8_A Glutamate-1-semialdehyd 100.0 3.2E-30 1.1E-34 262.6 23.3 343 93-464 50-426 (427)
176 2dgk_A GAD-beta, GADB, glutama 100.0 2.9E-29 1E-33 257.4 30.5 359 82-466 27-435 (452)
177 2cy8_A D-phgat, D-phenylglycin 100.0 3.8E-30 1.3E-34 264.1 23.7 336 93-465 55-435 (453)
178 2cjg_A L-lysine-epsilon aminot 100.0 2.5E-30 8.4E-35 265.1 20.9 337 93-465 52-448 (449)
179 3dr4_A Putative perosamine syn 100.0 2.7E-29 9.2E-34 252.6 27.2 320 95-462 22-390 (391)
180 2epj_A Glutamate-1-semialdehyd 100.0 4.1E-30 1.4E-34 262.3 20.7 339 93-465 54-431 (434)
181 3h7f_A Serine hydroxymethyltra 100.0 2.8E-29 9.7E-34 257.1 26.6 360 69-465 23-414 (447)
182 1cs1_A CGS, protein (cystathio 100.0 7E-29 2.4E-33 249.3 29.0 284 130-466 50-384 (386)
183 1gc0_A Methionine gamma-lyase; 100.0 5.7E-29 2E-33 251.0 26.7 282 130-461 63-397 (398)
184 2e7u_A Glutamate-1-semialdehyd 100.0 9.7E-30 3.3E-34 258.8 20.9 336 93-462 50-424 (424)
185 3ndn_A O-succinylhomoserine su 100.0 1.3E-28 4.6E-33 249.2 28.9 288 135-462 80-413 (414)
186 3e9k_A Kynureninase; kynurenin 100.0 1E-29 3.4E-34 261.8 21.0 335 94-466 65-462 (465)
187 4e77_A Glutamate-1-semialdehyd 100.0 1.2E-29 4.2E-34 258.4 21.0 348 93-464 51-428 (429)
188 3cog_A Cystathionine gamma-lya 100.0 5.8E-29 2E-33 251.3 25.2 292 126-467 62-400 (403)
189 1pff_A Methionine gamma-lyase; 100.0 4.9E-29 1.7E-33 244.9 22.8 278 136-460 2-329 (331)
190 1o69_A Aminotransferase; struc 100.0 4.1E-28 1.4E-32 244.4 27.0 316 110-463 11-385 (394)
191 3acz_A Methionine gamma-lyase; 100.0 9.8E-28 3.4E-32 241.2 28.3 281 131-464 58-388 (389)
192 2cb1_A O-acetyl homoserine sul 100.0 2.7E-27 9.3E-32 239.8 31.6 299 107-459 32-410 (412)
193 1qgn_A Protein (cystathionine 100.0 1.9E-27 6.5E-32 242.2 29.9 283 134-464 116-444 (445)
194 3qhx_A Cystathionine gamma-syn 100.0 8.8E-28 3E-32 241.8 26.7 284 131-462 65-391 (392)
195 1js3_A DDC;, DOPA decarboxylas 100.0 5.1E-28 1.8E-32 250.4 24.2 331 110-467 87-476 (486)
196 3frk_A QDTB; aminotransferase, 100.0 2.4E-27 8.3E-32 236.8 27.6 307 110-464 16-367 (373)
197 3nyt_A Aminotransferase WBPE; 100.0 3.5E-27 1.2E-31 235.2 28.4 302 110-461 15-360 (367)
198 2okj_A Glutamate decarboxylase 100.0 5.6E-27 1.9E-31 243.7 28.6 341 110-465 105-502 (504)
199 3bb8_A CDP-4-keto-6-deoxy-D-gl 100.0 2.9E-26 9.9E-31 234.1 31.5 320 94-463 30-434 (437)
200 1n8p_A Cystathionine gamma-lya 100.0 2.1E-27 7.2E-32 239.1 22.4 285 130-461 53-391 (393)
201 1wyu_A Glycine dehydrogenase ( 100.0 4E-27 1.4E-31 240.5 24.7 335 82-462 49-437 (438)
202 3hbx_A GAD 1, glutamate decarb 100.0 8.8E-27 3E-31 241.8 26.8 336 108-467 67-446 (502)
203 3ju7_A Putative PLP-dependent 100.0 1.9E-26 6.4E-31 230.8 26.1 319 100-464 5-374 (377)
204 3vp6_A Glutamate decarboxylase 99.9 4.1E-26 1.4E-30 237.2 28.8 342 110-465 109-505 (511)
205 3ri6_A O-acetylhomoserine sulf 99.9 3.5E-26 1.2E-30 232.1 26.3 284 130-462 80-429 (430)
206 2fq6_A Cystathionine beta-lyas 99.9 4.5E-26 1.5E-30 230.5 25.8 213 134-381 84-303 (415)
207 2x3l_A ORN/Lys/Arg decarboxyla 99.9 4.6E-27 1.6E-31 240.4 18.1 290 128-466 53-354 (446)
208 1ohv_A 4-aminobutyrate aminotr 99.9 4.1E-27 1.4E-31 242.5 17.8 339 93-466 61-472 (472)
209 3ke3_A Putative serine-pyruvat 99.9 4.4E-26 1.5E-30 228.3 23.6 299 135-466 34-377 (379)
210 2yky_A Beta-transaminase; tran 99.9 2.9E-29 1E-33 256.2 0.0 340 92-466 97-461 (465)
211 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.2E-26 7.5E-31 236.2 20.0 297 134-462 131-455 (456)
212 2qma_A Diaminobutyrate-pyruvat 99.9 7.9E-26 2.7E-30 234.6 23.3 333 109-465 112-496 (497)
213 3nmy_A Xometc, cystathionine g 99.9 4.4E-25 1.5E-29 222.4 25.7 280 134-463 69-397 (400)
214 2a7v_A Serine hydroxymethyltra 99.9 5.8E-25 2E-29 225.7 26.6 337 96-463 55-439 (490)
215 4e1o_A HDC, histidine decarbox 99.9 3.4E-25 1.2E-29 228.8 25.0 332 110-466 92-479 (481)
216 2jis_A Cysteine sulfinic acid 99.9 9.8E-25 3.3E-29 227.4 28.7 334 110-464 121-514 (515)
217 3b8x_A WBDK, pyridoxamine 5-ph 99.9 4.1E-24 1.4E-28 214.7 31.7 315 97-458 3-389 (390)
218 3k40_A Aromatic-L-amino-acid d 99.9 4.8E-25 1.6E-29 227.2 24.2 332 110-467 87-473 (475)
219 3ht4_A Aluminum resistance pro 99.9 6E-24 2.1E-28 215.7 22.7 258 136-424 65-345 (431)
220 2ctz_A O-acetyl-L-homoserine s 99.9 8.2E-24 2.8E-28 214.8 23.5 216 134-384 60-314 (421)
221 3jzl_A Putative cystathionine 99.9 6.5E-24 2.2E-28 213.8 22.1 252 131-423 58-338 (409)
222 1c4k_A Protein (ornithine deca 99.9 2.7E-23 9.1E-28 222.5 24.5 309 133-465 174-566 (730)
223 3hvy_A Cystathionine beta-lyas 99.9 2E-23 6.9E-28 210.9 21.7 270 111-423 47-355 (427)
224 3i16_A Aluminum resistance pro 99.9 9E-24 3.1E-28 213.5 18.7 254 130-423 71-355 (427)
225 2vyc_A Biodegradative arginine 99.9 9.4E-22 3.2E-26 212.3 23.4 306 135-465 208-605 (755)
226 3e77_A Phosphoserine aminotran 99.8 3.3E-20 1.1E-24 184.2 19.0 324 105-465 20-375 (377)
227 4ao9_A Beta-phenylalanine amin 99.8 5.6E-20 1.9E-24 186.4 20.5 341 92-466 84-447 (454)
228 3n75_A LDC, lysine decarboxyla 99.8 2.9E-19 1E-23 189.8 20.9 303 134-464 197-559 (715)
229 3m5u_A Phosphoserine aminotran 99.8 1.2E-18 4E-23 172.3 21.4 324 96-464 5-359 (361)
230 3qm2_A Phosphoserine aminotran 99.8 1.1E-18 3.8E-23 174.0 16.6 311 109-464 38-384 (386)
231 4e3q_A Pyruvate transaminase; 99.8 2.6E-16 8.8E-21 160.8 30.7 351 93-466 65-469 (473)
232 4atq_A 4-aminobutyrate transam 99.8 1E-16 3.5E-21 163.1 27.3 351 92-464 61-454 (456)
233 4a0g_A Adenosylmethionine-8-am 99.7 8.6E-17 2.9E-21 174.9 16.5 350 96-466 381-829 (831)
234 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 1.4E-15 4.9E-20 150.7 22.5 311 136-468 116-464 (501)
235 3ou5_A Serine hydroxymethyltra 99.6 5.1E-14 1.7E-18 139.1 25.0 336 97-463 56-439 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 1.1E-13 3.8E-18 139.0 20.9 314 133-466 95-444 (450)
237 3gh5_A HEX1, beta-hexosaminida 73.7 7.8 0.00027 39.3 7.8 113 149-266 124-273 (525)
238 3rwb_A TPLDH, pyridoxal 4-dehy 72.7 16 0.00054 32.7 9.1 98 154-256 5-110 (247)
239 3tpc_A Short chain alcohol deh 70.2 20 0.00069 32.1 9.3 98 154-256 6-115 (257)
240 4dqx_A Probable oxidoreductase 69.4 19 0.00065 32.9 9.0 99 153-256 25-131 (277)
241 4fgs_A Probable dehydrogenase 68.2 14 0.00049 33.9 7.8 99 154-257 28-134 (273)
242 2o23_A HADH2 protein; HSD17B10 68.1 45 0.0015 29.7 11.3 97 154-255 11-121 (265)
243 3nav_A Tryptophan synthase alp 66.4 78 0.0027 28.9 13.6 166 85-267 38-213 (271)
244 3tzq_B Short-chain type dehydr 65.6 39 0.0013 30.5 10.3 98 154-256 10-117 (271)
245 3m1a_A Putative dehydrogenase; 65.3 21 0.00073 32.4 8.5 96 156-256 6-109 (281)
246 3vnd_A TSA, tryptophan synthas 65.0 82 0.0028 28.6 15.2 167 84-267 35-211 (267)
247 3gem_A Short chain dehydrogena 64.2 31 0.0011 31.0 9.3 96 154-256 26-128 (260)
248 4e6p_A Probable sorbitol dehyd 62.2 29 0.00098 31.1 8.6 98 154-256 7-112 (259)
249 3grp_A 3-oxoacyl-(acyl carrier 61.3 24 0.00081 32.0 7.9 98 154-256 26-131 (266)
250 3gvc_A Oxidoreductase, probabl 61.2 22 0.00074 32.5 7.7 98 154-256 28-133 (277)
251 3h7a_A Short chain dehydrogena 61.1 50 0.0017 29.4 10.1 97 154-256 6-113 (252)
252 3sc4_A Short chain dehydrogena 60.3 82 0.0028 28.5 11.6 99 153-256 7-123 (285)
253 1jak_A Beta-N-acetylhexosamini 60.0 24 0.00083 35.6 8.2 111 151-266 102-248 (512)
254 3n74_A 3-ketoacyl-(acyl-carrie 59.6 34 0.0012 30.5 8.7 99 153-256 7-114 (261)
255 2nu8_A Succinyl-COA ligase [AD 59.6 60 0.0021 29.8 10.4 76 186-272 50-125 (288)
256 3ppi_A 3-hydroxyacyl-COA dehyd 59.0 20 0.0007 32.6 7.1 97 155-256 30-139 (281)
257 4hp8_A 2-deoxy-D-gluconate 3-d 58.7 23 0.0008 31.9 7.2 99 154-257 8-110 (247)
258 4g81_D Putative hexonate dehyd 58.5 45 0.0015 30.1 9.1 98 153-256 7-116 (255)
259 2gjx_A Beta-hexosaminidase alp 58.0 24 0.00082 35.6 7.8 107 151-266 96-232 (507)
260 2ew8_A (S)-1-phenylethanol deh 57.5 60 0.002 28.7 9.9 97 155-256 7-112 (249)
261 3lyl_A 3-oxoacyl-(acyl-carrier 57.0 46 0.0016 29.3 9.0 98 154-256 4-112 (247)
262 3op4_A 3-oxoacyl-[acyl-carrier 56.4 36 0.0012 30.3 8.1 98 154-256 8-113 (248)
263 4eso_A Putative oxidoreductase 56.4 30 0.001 31.0 7.7 97 154-256 7-112 (255)
264 3pxx_A Carveol dehydrogenase; 56.4 27 0.00093 31.7 7.5 98 154-256 9-127 (287)
265 1uls_A Putative 3-oxoacyl-acyl 56.3 49 0.0017 29.3 9.0 95 155-256 5-107 (245)
266 2yv2_A Succinyl-COA synthetase 56.1 79 0.0027 29.2 10.6 77 185-272 55-132 (297)
267 4ibo_A Gluconate dehydrogenase 56.0 50 0.0017 29.8 9.2 98 154-256 25-133 (271)
268 3rd5_A Mypaa.01249.C; ssgcid, 55.7 15 0.00051 33.8 5.5 69 154-227 15-83 (291)
269 4gkb_A 3-oxoacyl-[acyl-carrier 55.5 73 0.0025 28.7 10.1 98 153-256 5-112 (258)
270 1hxh_A 3BETA/17BETA-hydroxyste 55.1 55 0.0019 29.0 9.2 96 156-256 7-110 (253)
271 3l6e_A Oxidoreductase, short-c 54.5 32 0.0011 30.3 7.4 95 157-256 5-107 (235)
272 3rih_A Short chain dehydrogena 53.8 80 0.0027 28.9 10.3 98 154-256 40-149 (293)
273 1x1t_A D(-)-3-hydroxybutyrate 53.3 73 0.0025 28.3 9.8 95 156-255 5-112 (260)
274 4fn4_A Short chain dehydrogena 52.9 38 0.0013 30.6 7.6 97 154-256 6-115 (254)
275 2q2v_A Beta-D-hydroxybutyrate 52.8 1.2E+02 0.0041 26.7 11.2 95 156-255 5-108 (255)
276 4fc7_A Peroxisomal 2,4-dienoyl 52.7 68 0.0023 28.9 9.5 97 155-256 27-135 (277)
277 1vl8_A Gluconate 5-dehydrogena 52.1 62 0.0021 29.1 9.1 98 154-256 20-129 (267)
278 2yv1_A Succinyl-COA ligase [AD 51.7 58 0.002 30.1 8.8 76 186-272 56-131 (294)
279 3rkr_A Short chain oxidoreduct 51.6 69 0.0024 28.5 9.3 97 155-256 29-137 (262)
280 3gaf_A 7-alpha-hydroxysteroid 51.5 54 0.0019 29.2 8.5 98 154-256 11-118 (256)
281 3t7c_A Carveol dehydrogenase; 51.2 69 0.0024 29.3 9.4 98 154-256 27-148 (299)
282 3r1i_A Short-chain type dehydr 50.7 82 0.0028 28.4 9.7 99 153-256 30-139 (276)
283 3tfo_A Putative 3-oxoacyl-(acy 50.5 73 0.0025 28.6 9.3 95 157-256 6-111 (264)
284 3kvo_A Hydroxysteroid dehydrog 50.3 1.7E+02 0.0057 27.5 12.6 96 155-255 45-158 (346)
285 3rjz_A N-type ATP pyrophosphat 50.1 1.1E+02 0.0036 27.3 9.9 100 157-267 7-121 (237)
286 3e03_A Short chain dehydrogena 50.1 1.4E+02 0.0048 26.7 11.7 98 153-256 4-120 (274)
287 1hdc_A 3-alpha, 20 beta-hydrox 50.1 48 0.0016 29.5 7.9 96 155-255 5-108 (254)
288 2gjh_A Designed protein; oblig 50.0 33 0.0011 22.0 4.6 29 439-467 3-32 (62)
289 1now_A Beta-hexosaminidase bet 49.8 28 0.00097 35.0 6.8 106 151-266 102-237 (507)
290 3sx2_A Putative 3-ketoacyl-(ac 49.2 70 0.0024 28.7 9.0 96 154-256 12-128 (278)
291 3l77_A Short-chain alcohol deh 49.1 82 0.0028 27.3 9.3 95 157-256 4-110 (235)
292 2c07_A 3-oxoacyl-(acyl-carrier 49.1 1.1E+02 0.0037 27.6 10.3 95 156-255 45-150 (285)
293 4dmm_A 3-oxoacyl-[acyl-carrier 49.0 43 0.0015 30.2 7.5 99 153-256 26-136 (269)
294 3tjr_A Short chain dehydrogena 48.7 70 0.0024 29.3 9.1 98 154-256 30-138 (301)
295 3ai3_A NADPH-sorbose reductase 48.7 82 0.0028 28.0 9.3 97 154-255 6-114 (263)
296 2jah_A Clavulanic acid dehydro 48.7 79 0.0027 27.9 9.1 97 155-256 7-114 (247)
297 3guy_A Short-chain dehydrogena 48.3 23 0.0008 31.0 5.4 94 157-256 3-102 (230)
298 4dyv_A Short-chain dehydrogena 48.2 53 0.0018 29.7 8.0 94 157-256 30-133 (272)
299 3tsc_A Putative oxidoreductase 48.1 49 0.0017 29.9 7.8 98 154-256 10-131 (277)
300 2ae2_A Protein (tropinone redu 48.1 98 0.0033 27.4 9.8 96 154-255 8-116 (260)
301 3qlj_A Short chain dehydrogena 47.8 66 0.0022 29.8 8.7 95 156-256 28-144 (322)
302 3ksu_A 3-oxoacyl-acyl carrier 47.6 1.5E+02 0.0052 26.3 11.2 97 154-256 10-121 (262)
303 3f9i_A 3-oxoacyl-[acyl-carrier 47.2 39 0.0013 29.9 6.8 75 154-233 13-89 (249)
304 4imr_A 3-oxoacyl-(acyl-carrier 47.2 1.1E+02 0.0038 27.5 10.0 98 154-256 32-139 (275)
305 3qiv_A Short-chain dehydrogena 47.0 79 0.0027 27.8 8.9 98 153-256 7-119 (253)
306 4iin_A 3-ketoacyl-acyl carrier 46.8 53 0.0018 29.5 7.7 102 150-256 24-137 (271)
307 3edm_A Short chain dehydrogena 46.4 1E+02 0.0034 27.4 9.5 97 154-256 7-117 (259)
308 3is3_A 17BETA-hydroxysteroid d 46.3 45 0.0015 30.0 7.2 97 154-256 17-126 (270)
309 3ak4_A NADH-dependent quinucli 46.1 68 0.0023 28.5 8.3 97 154-255 11-115 (263)
310 3ged_A Short-chain dehydrogena 46.1 61 0.0021 29.1 7.8 93 157-256 4-105 (247)
311 3v2h_A D-beta-hydroxybutyrate 46.0 98 0.0034 27.9 9.5 98 154-256 24-134 (281)
312 3afn_B Carbonyl reductase; alp 46.0 1.5E+02 0.0051 25.8 10.6 95 156-255 8-115 (258)
313 3uve_A Carveol dehydrogenase ( 45.8 49 0.0017 30.0 7.4 97 154-256 10-135 (286)
314 2rhc_B Actinorhodin polyketide 45.6 83 0.0029 28.3 8.9 98 154-256 21-129 (277)
315 1fmc_A 7 alpha-hydroxysteroid 45.6 1.1E+02 0.0039 26.6 9.8 97 154-255 10-116 (255)
316 3rcn_A Beta-N-acetylhexosamini 45.1 16 0.00056 37.1 4.2 116 149-266 80-241 (543)
317 2wsb_A Galactitol dehydrogenas 44.9 77 0.0026 27.8 8.5 97 154-255 10-114 (254)
318 3awd_A GOX2181, putative polyo 44.8 1E+02 0.0035 27.1 9.3 97 154-255 12-120 (260)
319 1nff_A Putative oxidoreductase 44.8 74 0.0025 28.3 8.4 98 154-256 6-111 (260)
320 3sju_A Keto reductase; short-c 44.5 80 0.0027 28.5 8.6 96 156-256 25-131 (279)
321 3tha_A Tryptophan synthase alp 44.3 1.8E+02 0.0061 26.1 12.0 163 85-267 32-204 (252)
322 3v2g_A 3-oxoacyl-[acyl-carrier 43.8 1.2E+02 0.0041 27.2 9.7 98 153-256 29-139 (271)
323 1c7s_A Beta-N-acetylhexosamini 43.6 33 0.0011 37.0 6.3 114 151-266 264-417 (858)
324 3zv4_A CIS-2,3-dihydrobiphenyl 43.5 61 0.0021 29.4 7.6 68 154-226 4-71 (281)
325 2uvd_A 3-oxoacyl-(acyl-carrier 43.4 92 0.0031 27.3 8.7 96 156-256 5-112 (246)
326 2pnf_A 3-oxoacyl-[acyl-carrier 43.3 99 0.0034 26.9 8.9 97 154-255 6-114 (248)
327 1geg_A Acetoin reductase; SDR 43.2 80 0.0027 27.9 8.3 95 157-256 4-109 (256)
328 4h27_A L-serine dehydratase/L- 43.1 70 0.0024 30.5 8.2 80 156-241 94-176 (364)
329 3imf_A Short chain dehydrogena 43.1 95 0.0032 27.5 8.8 97 156-257 7-114 (257)
330 1zk4_A R-specific alcohol dehy 42.9 94 0.0032 27.1 8.7 95 156-255 7-111 (251)
331 3s55_A Putative short-chain de 42.5 1.9E+02 0.0063 25.9 11.5 98 154-256 9-129 (281)
332 3pgx_A Carveol dehydrogenase; 42.5 60 0.0021 29.3 7.4 98 154-256 14-135 (280)
333 1iy8_A Levodione reductase; ox 42.3 1E+02 0.0035 27.4 9.0 96 154-255 12-122 (267)
334 2z1n_A Dehydrogenase; reductas 42.2 1.2E+02 0.0041 26.8 9.3 97 154-255 6-114 (260)
335 1ae1_A Tropinone reductase-I; 42.0 1.3E+02 0.0044 26.9 9.6 97 154-256 20-129 (273)
336 3ucx_A Short chain dehydrogena 41.5 89 0.003 27.8 8.4 98 154-256 10-119 (264)
337 2a4k_A 3-oxoacyl-[acyl carrier 41.5 68 0.0023 28.7 7.5 97 155-256 6-110 (263)
338 3ijr_A Oxidoreductase, short c 41.4 1.2E+02 0.0042 27.4 9.5 97 154-256 46-156 (291)
339 3oec_A Carveol dehydrogenase ( 41.3 1.1E+02 0.0037 28.3 9.1 98 154-256 45-165 (317)
340 3ozo_A N-acetylglucosaminidase 40.3 80 0.0027 32.2 8.4 100 157-266 142-273 (572)
341 3t4x_A Oxidoreductase, short c 40.2 1.3E+02 0.0044 26.8 9.2 99 153-256 8-115 (267)
342 3uf0_A Short-chain dehydrogena 40.1 2E+02 0.007 25.6 11.0 98 153-256 29-136 (273)
343 4b79_A PA4098, probable short- 40.0 96 0.0033 27.7 8.1 92 156-256 12-106 (242)
344 3zu3_A Putative reductase YPO4 39.9 2.7E+02 0.0091 26.9 12.3 66 156-226 48-129 (405)
345 3a28_C L-2.3-butanediol dehydr 39.7 99 0.0034 27.4 8.3 95 157-256 4-111 (258)
346 4egf_A L-xylulose reductase; s 39.6 91 0.0031 27.9 8.1 98 154-256 19-128 (266)
347 3gdg_A Probable NADP-dependent 39.6 1.7E+02 0.0057 25.9 9.9 98 154-256 19-131 (267)
348 1yb1_A 17-beta-hydroxysteroid 39.5 92 0.0032 27.9 8.1 69 153-226 29-100 (272)
349 3o38_A Short chain dehydrogena 39.3 91 0.0031 27.7 8.0 98 154-256 21-131 (266)
350 1bqc_A Protein (beta-mannanase 39.1 58 0.002 29.9 6.8 21 247-268 64-84 (302)
351 3cxt_A Dehydrogenase with diff 39.0 98 0.0034 28.2 8.3 97 153-255 32-140 (291)
352 3lf2_A Short chain oxidoreduct 39.0 1.4E+02 0.0048 26.5 9.3 99 153-256 6-117 (265)
353 3v8b_A Putative dehydrogenase, 38.9 1.2E+02 0.0041 27.4 8.9 98 154-256 27-136 (283)
354 2cfc_A 2-(R)-hydroxypropyl-COM 38.8 77 0.0026 27.7 7.4 94 157-255 4-112 (250)
355 1w6u_A 2,4-dienoyl-COA reducta 38.8 1.2E+02 0.0041 27.4 9.0 96 156-256 27-134 (302)
356 2hq1_A Glucose/ribitol dehydro 38.1 1.2E+02 0.004 26.4 8.5 67 155-226 5-75 (247)
357 2b4q_A Rhamnolipids biosynthes 37.9 1.4E+02 0.0049 26.7 9.2 97 154-256 28-135 (276)
358 3osu_A 3-oxoacyl-[acyl-carrier 37.9 82 0.0028 27.7 7.4 96 156-256 5-112 (246)
359 3ftp_A 3-oxoacyl-[acyl-carrier 37.8 1.1E+02 0.0037 27.5 8.3 97 154-256 27-135 (270)
360 3r3s_A Oxidoreductase; structu 37.0 1.5E+02 0.0052 26.8 9.3 98 154-256 48-159 (294)
361 3d3w_A L-xylulose reductase; u 36.8 1.9E+02 0.0066 24.9 9.8 95 154-255 6-105 (244)
362 1h5q_A NADP-dependent mannitol 36.7 1.9E+02 0.0066 25.2 9.8 94 156-255 15-121 (265)
363 3mwd_B ATP-citrate synthase; A 36.6 61 0.0021 30.6 6.4 76 186-272 64-141 (334)
364 3oid_A Enoyl-[acyl-carrier-pro 36.6 1.5E+02 0.0052 26.2 9.1 95 157-256 6-112 (258)
365 3tox_A Short chain dehydrogena 36.6 1.6E+02 0.0054 26.5 9.3 95 156-256 9-116 (280)
366 3pk0_A Short-chain dehydrogena 36.3 1.2E+02 0.004 27.0 8.2 98 154-256 9-118 (262)
367 1zem_A Xylitol dehydrogenase; 36.3 1.5E+02 0.0051 26.2 9.0 97 154-255 6-114 (262)
368 1oaa_A Sepiapterin reductase; 36.0 89 0.003 27.7 7.4 96 156-256 7-125 (259)
369 1oi7_A Succinyl-COA synthetase 35.9 46 0.0016 30.7 5.4 77 186-273 50-126 (288)
370 3vc3_A Beta-cyanoalnine syntha 35.9 57 0.0019 30.9 6.2 106 132-240 62-171 (344)
371 3tl3_A Short-chain type dehydr 35.7 52 0.0018 29.3 5.7 94 154-256 8-113 (257)
372 1xq1_A Putative tropinone redu 35.6 1.4E+02 0.0048 26.3 8.7 98 154-256 13-122 (266)
373 1yxm_A Pecra, peroxisomal tran 35.6 1.5E+02 0.0051 26.8 9.0 96 155-255 18-129 (303)
374 1xhl_A Short-chain dehydrogena 35.3 1.2E+02 0.0042 27.5 8.4 97 154-255 25-137 (297)
375 2bgk_A Rhizome secoisolaricire 35.2 1.6E+02 0.0056 26.0 9.1 97 154-255 15-123 (278)
376 1xkq_A Short-chain reductase f 35.1 1.2E+02 0.0043 27.1 8.3 95 156-255 7-119 (280)
377 3bk2_A RNAse J, metal dependen 35.0 62 0.0021 33.0 6.7 97 158-263 309-423 (562)
378 3nyw_A Putative oxidoreductase 35.0 80 0.0027 27.9 6.8 95 155-255 7-115 (250)
379 1cyd_A Carbonyl reductase; sho 34.9 2.2E+02 0.0074 24.5 9.8 95 154-255 6-105 (244)
380 3ic5_A Putative saccharopine d 34.8 1.3E+02 0.0043 22.4 7.2 91 156-266 6-97 (118)
381 3l21_A DHDPS, dihydrodipicolin 34.3 2.8E+02 0.0095 25.5 11.0 107 135-270 67-178 (304)
382 1yo6_A Putative carbonyl reduc 34.2 2E+02 0.0068 24.7 9.4 94 157-255 5-111 (250)
383 2d1y_A Hypothetical protein TT 34.0 2.4E+02 0.0082 24.7 10.1 93 155-255 6-106 (256)
384 2dtx_A Glucose 1-dehydrogenase 33.9 1.5E+02 0.0052 26.3 8.6 89 155-256 8-104 (264)
385 1edo_A Beta-keto acyl carrier 33.7 1.7E+02 0.0058 25.3 8.8 94 157-255 3-108 (244)
386 3ctm_A Carbonyl reductase; alc 33.4 1.2E+02 0.0041 27.1 7.9 68 154-226 33-103 (279)
387 3dz1_A Dihydrodipicolinate syn 33.1 1.4E+02 0.005 27.6 8.5 111 135-272 60-174 (313)
388 1spx_A Short-chain reductase f 33.0 92 0.0032 27.9 7.0 66 156-226 7-78 (278)
389 1i4n_A Indole-3-glycerol phosp 33.0 45 0.0015 30.1 4.6 48 214-268 109-156 (251)
390 3rku_A Oxidoreductase YMR226C; 32.9 1.2E+02 0.0042 27.5 7.9 95 156-256 34-146 (287)
391 2yvq_A Carbamoyl-phosphate syn 32.3 2E+02 0.0067 23.1 10.2 104 156-267 25-130 (143)
392 3na8_A Putative dihydrodipicol 32.2 2.9E+02 0.0099 25.5 10.4 107 135-270 76-188 (315)
393 3ezl_A Acetoacetyl-COA reducta 31.9 1.8E+02 0.0062 25.4 8.8 95 156-256 14-121 (256)
394 3u9l_A 3-oxoacyl-[acyl-carrier 31.8 1.7E+02 0.0059 27.0 8.9 94 156-255 6-116 (324)
395 2bd0_A Sepiapterin reductase; 31.8 1.4E+02 0.0049 25.8 8.0 95 157-256 4-116 (244)
396 2ehh_A DHDPS, dihydrodipicolin 31.8 2.9E+02 0.01 25.1 10.3 87 157-269 71-163 (294)
397 2x9g_A PTR1, pteridine reducta 31.3 1.4E+02 0.0047 26.9 8.0 70 156-226 24-98 (288)
398 1gee_A Glucose 1-dehydrogenase 30.1 1.8E+02 0.0061 25.5 8.4 95 156-255 8-114 (261)
399 2yxg_A DHDPS, dihydrodipicolin 29.8 3.2E+02 0.011 24.8 12.2 106 136-270 53-164 (289)
400 3fkr_A L-2-keto-3-deoxyarabona 29.6 1.9E+02 0.0066 26.6 8.7 74 192-270 95-174 (309)
401 3svt_A Short-chain type dehydr 29.3 2E+02 0.007 25.6 8.7 98 154-256 10-122 (281)
402 2zat_A Dehydrogenase/reductase 29.2 2.3E+02 0.0079 24.8 9.0 97 154-255 13-121 (260)
403 4iiu_A 3-oxoacyl-[acyl-carrier 29.1 2.3E+02 0.008 24.9 9.1 96 156-256 27-134 (267)
404 1ja9_A 4HNR, 1,3,6,8-tetrahydr 29.1 1.7E+02 0.0058 25.8 8.1 96 154-255 20-128 (274)
405 3ruf_A WBGU; rossmann fold, UD 28.9 2.5E+02 0.0086 25.7 9.6 75 154-236 24-108 (351)
406 3s5o_A 4-hydroxy-2-oxoglutarat 28.9 3.4E+02 0.012 24.9 11.8 106 135-270 66-179 (307)
407 3sxp_A ADP-L-glycero-D-mannohe 28.8 2.7E+02 0.0094 25.7 9.9 104 153-263 8-131 (362)
408 3asu_A Short-chain dehydrogena 28.6 1.2E+02 0.0042 26.6 7.0 93 158-256 3-105 (248)
409 4a29_A Engineered retro-aldol 28.5 44 0.0015 30.2 3.7 82 181-272 81-162 (258)
410 3u5t_A 3-oxoacyl-[acyl-carrier 28.5 2.4E+02 0.0084 25.0 9.1 95 156-256 28-135 (267)
411 3i1j_A Oxidoreductase, short c 28.4 1.7E+02 0.0058 25.4 7.9 98 156-256 15-125 (247)
412 3dqp_A Oxidoreductase YLBE; al 28.4 1.8E+02 0.0061 24.7 7.9 93 157-260 2-96 (219)
413 3tak_A DHDPS, dihydrodipicolin 28.3 2.7E+02 0.0092 25.3 9.3 52 135-190 53-108 (291)
414 3qp9_A Type I polyketide synth 28.2 1.9E+02 0.0064 29.1 8.9 99 153-256 248-372 (525)
415 2ojp_A DHDPS, dihydrodipicolin 28.0 2.9E+02 0.01 25.1 9.5 106 135-269 53-163 (292)
416 1qys_A TOP7; alpha-beta, novel 27.9 98 0.0033 22.0 4.6 30 438-467 46-76 (106)
417 1xg5_A ARPG836; short chain de 27.7 2.6E+02 0.0089 24.8 9.2 95 156-255 33-140 (279)
418 3qfe_A Putative dihydrodipicol 27.7 3.7E+02 0.013 24.8 12.5 39 229-270 140-178 (318)
419 2ph3_A 3-oxoacyl-[acyl carrier 27.6 2.3E+02 0.008 24.3 8.6 94 157-255 3-109 (245)
420 3gk3_A Acetoacetyl-COA reducta 27.1 2.5E+02 0.0086 24.8 8.9 95 157-256 27-133 (269)
421 1g0o_A Trihydroxynaphthalene r 26.7 3.3E+02 0.011 24.2 9.7 95 156-256 30-137 (283)
422 2rkb_A Serine dehydratase-like 26.7 1.4E+02 0.0048 27.6 7.2 52 155-207 54-107 (318)
423 3si9_A DHDPS, dihydrodipicolin 26.4 3.9E+02 0.013 24.7 10.3 106 135-269 74-185 (315)
424 1f6k_A N-acetylneuraminate lya 26.2 3.7E+02 0.013 24.4 13.3 33 157-190 75-111 (293)
425 3dii_A Short-chain dehydrogena 26.0 1.8E+02 0.0061 25.5 7.5 94 157-256 4-105 (247)
426 2zcu_A Uncharacterized oxidore 25.8 2.6E+02 0.0089 24.6 8.8 91 158-260 2-94 (286)
427 1o5k_A DHDPS, dihydrodipicolin 25.8 2.7E+02 0.0093 25.5 8.9 108 135-270 64-176 (306)
428 2fwm_X 2,3-dihydro-2,3-dihydro 25.7 3.3E+02 0.011 23.6 9.8 91 154-256 6-104 (250)
429 2nuw_A 2-keto-3-deoxygluconate 25.7 2.2E+02 0.0074 26.0 8.2 50 135-191 51-104 (288)
430 2ehd_A Oxidoreductase, oxidore 25.5 2.5E+02 0.0086 24.0 8.4 92 157-255 7-107 (234)
431 3tbh_A O-acetyl serine sulfhyd 25.5 1.5E+02 0.0052 27.6 7.2 75 133-208 48-126 (334)
432 3ss7_X D-serine dehydratase; t 25.4 2.2E+02 0.0076 27.8 8.7 52 157-208 162-214 (442)
433 4aec_A Cysteine synthase, mito 25.1 1.6E+02 0.0055 28.8 7.4 107 132-241 150-260 (430)
434 4e3z_A Putative oxidoreductase 24.9 2.9E+02 0.0099 24.4 8.9 95 157-256 28-135 (272)
435 2whl_A Beta-mannanase, baman5; 24.8 1.1E+02 0.0037 27.8 5.9 16 194-209 38-53 (294)
436 2jl1_A Triphenylmethane reduct 24.6 3E+02 0.01 24.2 9.0 96 157-263 2-99 (287)
437 3i6i_A Putative leucoanthocyan 24.3 1.7E+02 0.0058 27.0 7.4 92 156-262 11-110 (346)
438 3un1_A Probable oxidoreductase 24.2 2.1E+02 0.0071 25.3 7.7 92 154-256 27-126 (260)
439 3dmy_A Protein FDRA; predicted 23.9 67 0.0023 32.0 4.5 72 185-268 20-92 (480)
440 2pju_A Propionate catabolism o 23.9 2.8E+02 0.0097 24.2 8.2 48 157-208 40-90 (225)
441 2d1f_A Threonine synthase; ami 23.4 1.6E+02 0.0053 27.9 6.9 52 156-208 86-140 (360)
442 3b4u_A Dihydrodipicolinate syn 23.3 4.2E+02 0.014 24.0 11.9 53 135-191 55-111 (294)
443 1tks_A 3,4-dihydroxy-2-butanon 23.0 84 0.0029 27.2 4.3 36 228-267 159-194 (204)
444 2vc6_A MOSA, dihydrodipicolina 22.8 4.3E+02 0.015 23.9 12.7 107 135-270 52-164 (292)
445 2q5c_A NTRC family transcripti 22.7 3.5E+02 0.012 22.9 8.4 89 134-238 13-104 (196)
446 3l4b_C TRKA K+ channel protien 22.7 3.5E+02 0.012 22.9 10.1 93 158-266 3-96 (218)
447 1tlt_A Putative oxidoreductase 22.7 4.3E+02 0.015 23.9 9.8 25 245-270 100-124 (319)
448 3f1l_A Uncharacterized oxidore 22.6 3.8E+02 0.013 23.3 9.2 98 155-256 12-123 (252)
449 1p5j_A L-serine dehydratase; l 22.6 1.4E+02 0.0047 28.5 6.3 51 156-207 94-146 (372)
450 1yht_A DSPB; beta barrel, hydr 22.5 1.2E+02 0.004 29.0 5.8 69 194-266 40-112 (367)
451 1jr2_A Uroporphyrinogen-III sy 22.4 1.1E+02 0.0036 27.9 5.3 91 159-259 137-231 (286)
452 2d59_A Hypothetical protein PH 22.3 1.1E+02 0.0036 24.7 4.7 44 218-272 91-134 (144)
453 2rfg_A Dihydrodipicolinate syn 22.1 4.5E+02 0.015 23.9 9.8 87 157-270 71-163 (297)
454 4id9_A Short-chain dehydrogena 22.0 4E+02 0.014 24.2 9.6 91 154-260 18-116 (347)
455 2r8w_A AGR_C_1641P; APC7498, d 22.0 4.6E+02 0.016 24.3 9.8 106 135-270 86-197 (332)
456 1yde_A Retinal dehydrogenase/r 22.0 4.1E+02 0.014 23.4 9.6 97 154-256 8-113 (270)
457 3pff_A ATP-citrate synthase; p 21.7 1.3E+02 0.0045 32.1 6.4 75 186-271 550-626 (829)
458 3qze_A DHDPS, dihydrodipicolin 21.6 4.8E+02 0.016 24.0 10.7 86 157-269 94-185 (314)
459 2pd6_A Estradiol 17-beta-dehyd 21.4 2.3E+02 0.0077 24.8 7.3 32 155-186 7-38 (264)
460 3aey_A Threonine synthase; PLP 21.4 1.6E+02 0.0056 27.6 6.6 52 156-208 78-132 (351)
461 4gqr_A Pancreatic alpha-amylas 21.4 58 0.002 32.0 3.5 29 246-275 75-103 (496)
462 1b93_A Protein (methylglyoxal 21.3 3.1E+02 0.011 22.4 7.3 70 192-268 48-119 (152)
463 2wkj_A N-acetylneuraminate lya 21.3 4.7E+02 0.016 23.8 13.5 88 157-270 82-175 (303)
464 3tla_A MCCF; serine protease, 21.3 2.3E+02 0.0079 27.0 7.5 71 176-246 40-127 (371)
465 3dwg_A Cysteine synthase B; su 21.2 86 0.003 29.3 4.5 52 156-208 74-127 (325)
466 1wma_A Carbonyl reductase [NAD 21.2 2.6E+02 0.0087 24.4 7.7 66 156-226 5-74 (276)
467 3ioy_A Short-chain dehydrogena 21.0 2.4E+02 0.0083 25.8 7.6 96 155-256 8-117 (319)
468 2yl5_A Beta-N-acetylhexosamini 21.0 69 0.0024 31.6 3.8 28 238-266 85-112 (442)
469 4f6o_A Metacaspase-1; rossmann 20.6 1.8E+02 0.0062 27.5 6.5 52 132-185 71-134 (350)
470 1ve5_A Threonine deaminase; ri 20.6 2E+02 0.0069 26.3 6.9 71 132-208 47-119 (311)
471 1mxh_A Pteridine reductase 2; 20.5 2.5E+02 0.0086 24.8 7.5 55 156-210 12-71 (276)
472 3icc_A Putative 3-oxoacyl-(acy 20.5 4.1E+02 0.014 22.8 9.7 95 156-256 8-121 (255)
473 2h7i_A Enoyl-[acyl-carrier-pro 20.3 2.2E+02 0.0074 25.2 7.0 66 156-226 8-76 (269)
474 1iuk_A Hypothetical protein TT 20.3 63 0.0022 26.0 2.9 41 221-272 87-127 (140)
475 2yxb_A Coenzyme B12-dependent 20.2 2.7E+02 0.0092 22.8 6.9 56 194-260 40-96 (161)
No 1
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2e-57 Score=457.45 Aligned_cols=380 Identities=43% Similarity=0.709 Sum_probs=338.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++++.++...+.++...|+++|+|+.|+|++++|+.+.+++.+++..+..+|++..|..+||+++++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 83 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRR 83 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 67788889999888888888777777888999999999998899999999998877677898888999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|.++++++|++|+|+++++..+++++++|||+|++++|+|+.|...++..|++++.++++.+++|.+|++++++++++
T Consensus 84 ~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 163 (385)
T 1b5p_A 84 ENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITP 163 (385)
T ss_dssp TTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCT
T ss_pred HhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCC
Confidence 89988889999999999999999999999999999999999999999999999999999998656788999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++||||||.++|.+++++|+++|++| +++||+||+|.++.+++ ...++..+.. +++++++||||.+|++
T Consensus 164 ~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~-~~~~~~~~~~--~~~i~~~s~SK~~~~~ 239 (385)
T 1b5p_A 164 RTKALVVNSPNNPTGAVYPKEVLEALARLAVEH-DFYLVSDEIYEHLLYEG-EHFSPGRVAP--EHTLTVNGAAKAFAMT 239 (385)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSS-CCCCGGGTCT--TTEEEEEESTTTTTCG
T ss_pred CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-CCCCHHHcCC--CCEEEEEechhhcCCc
Confidence 899999999999999999999999999999999 99999999999998876 4456666643 7899999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+.........+++.+.|.++.++|+......+++++.++.++++++++.+.|+++ |+.+..|+
T Consensus 240 G~RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 318 (385)
T 1b5p_A 240 GWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPS 318 (385)
T ss_dssp GGCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCS
T ss_pred ccceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCC
Confidence 99999999999999999988777777899999999999996300014678899999999999999999988 89988999
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
++||+|++++.. + .+..++.+.|+ ++||.+.||..|+.++++|||++.+++++++++++|+++++
T Consensus 319 ~~~~~~~~~~~~-~---------~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 319 GAFYVLMDTSPI-A---------PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp BTTEEEEECTTT-C---------SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGGC-
T ss_pred eeEEEEEecCCC-C---------CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 999999998631 1 26788999988 45999999999987889999999999999999999987764
No 2
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=4.2e-55 Score=440.55 Aligned_cols=384 Identities=46% Similarity=0.804 Sum_probs=342.1
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++.+..+...+.+....|+++|+|+.|++++++|+.+.+++.+++.++..+|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 82 (388)
T 1j32_A 3 LAARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQR 82 (388)
T ss_dssp CCHHHHTSCCCSSTTTHHHHHHHHTTTCCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHhHhCCccHHHHHHHHHHHHHhcCCCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 56677778887777777777777777889999999999988889999999998877667898888999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+++|.+|+++|++++++
T Consensus 83 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~ 162 (388)
T 1j32_A 83 DNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP 162 (388)
T ss_dssp HHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT
T ss_pred hcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc
Confidence 99988888999999999999999999999999999999999999999999999999999987655788999999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAM 306 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~ 306 (471)
++++|++++|+||||.++|.+++++|+++|++| |++||+||+|.++.+++....++..+.. ..++++++.||||.+|+
T Consensus 163 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~ 241 (388)
T 1j32_A 163 KTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEA-GLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAM 241 (388)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTC
T ss_pred CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCC
Confidence 899999999999999999999999999999999 9999999999999887655555555542 14688999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+.......+++++.+.|.++.++|+. ..+++++++++++++++++.+.|++++|+++..|
T Consensus 242 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 318 (388)
T 1j32_A 242 TGWRVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN---SQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP 318 (388)
T ss_dssp TTTCCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS---CSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC
T ss_pred cccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence 9999999999999999998887777788999999999999985 3678999999999999999999999889999889
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+++|+|++++.. + .+..++++.|++++||.+.||..|+.++++|++++.+++++++++++|+++++++
T Consensus 319 ~~~~~~~~~~~~~-~---------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 319 DGAFYMFPSIAKT-G---------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp CBTTEECCBCGGG-T---------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEEecCCC-C---------CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 9999999988641 0 2678899998875699999999998889999999999999999999999998765
No 3
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=2.8e-54 Score=435.11 Aligned_cols=376 Identities=26% Similarity=0.420 Sum_probs=330.1
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
++ ++..++++.+.++...+.++...|+++|+|+.|++++++|+.+.+++.+++.++..+|++..|..++|+++++++++
T Consensus 5 ~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 83 (391)
T 3h14_A 5 NS-SRSAVDPFIVMDVMEAARRAEEAGRRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGE 83 (391)
T ss_dssp CC-STTCCCCCTTHHHHHHHHHHHHTTCCCEECCCSSCSSCSCHHHHHHHHHHHC----------CCHHHHHHHHHHHHH
T ss_pred hh-hHhhcCcchHHHHHHHHHHHHhcCCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHH
Confidence 44 78888899999999988888889999999999999999999999999998876678898888999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|+++++++|++|+|+++++..++++++++||+|+++.|+|.++...++..|++++.++++.+++|.+|+++++++
T Consensus 84 ~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~--- 160 (391)
T 3h14_A 84 WYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL--- 160 (391)
T ss_dssp HHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---
T ss_pred HhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---
Confidence 99988899999999999999999999999999999999999999999999999999999998777788999999987
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++|+||||.+++.+++++|+++|++| +++||+||+|.++.+++. ..++..+ .+++++++||||.+|++
T Consensus 161 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~---~~~~i~~~s~sK~~g~~ 235 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQ-GASFISDEIYHGIEYEAK-AVTALEL---TDECYVINSFSKYFSMT 235 (391)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBSSSC-CCCGGGT---CSSSEEEEESSSTTCCT
T ss_pred CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEECcchhcccCCC-CcChhhc---CCCEEEEEechhccCCc
Confidence 789999999999999999999999999999999 999999999999988764 2333333 47889999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+......++++++.+.|.++.++|. ..+++++.+++++++++.+.+.|++++...+..|+
T Consensus 236 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 311 (391)
T 3h14_A 236 GWRVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALD----CDAELQANLDVYKANRKLMLERLPKAGFTRIAPPD 311 (391)
T ss_dssp TSCCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTT----CHHHHHHHHHHHHHHHHHHHHHHHHHTCCCBCCCC
T ss_pred cceeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhC----ChHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC
Confidence 99999999999999999988888888899999999988887 37889999999999999999999988334446789
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+++|+|++++... .+..+++++|++++||.+.||+.|+. ++++|++++.+++++++++++|++++++
T Consensus 312 ~~~~~~~~~~~~~----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~ 381 (391)
T 3h14_A 312 GAFYVYADVSDLT----------DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQA 381 (391)
T ss_dssp BTTEEEEECTTTC----------SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEecCccC----------CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 9999999987521 26889999998877999999999986 5799999999999999999999999986
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
..
T Consensus 382 ~~ 383 (391)
T 3h14_A 382 RG 383 (391)
T ss_dssp C-
T ss_pred hc
Confidence 53
No 4
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-54 Score=437.46 Aligned_cols=386 Identities=26% Similarity=0.412 Sum_probs=324.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
+++++..++++.+..+...+......|+++|+|+.|++++++++.+.+++.+++.+. ..+|++..|..++|+++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~ 89 (412)
T 2x5d_A 10 RFARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYR 89 (412)
T ss_dssp -----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHH
T ss_pred hhHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHH
Confidence 567777888887777777666666778899999999999888899999998877653 4679888999999999999999
Q ss_pred HHhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 147 EENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 147 ~~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+.+|.++++ ++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+++|.+|++++++++
T Consensus 90 ~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i 169 (412)
T 2x5d_A 90 DRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRES 169 (412)
T ss_dssp HHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTE
T ss_pred HHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhc
Confidence 888987788 7999999999999999999999999999999999999999999999999999986557778999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++++|++++||||||.+++.+++++|+++|++| +++||+||+|..+.+++....++..+....++++++.||||.+|
T Consensus 170 ~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (412)
T 2x5d_A 170 IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQY-DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN 248 (412)
T ss_dssp ESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS
T ss_pred ccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC
Confidence 88899999999999999999999999999999999 99999999999998866545566665433578999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+.......+++++.++|.++.++|+. ..++++++++.++++++++.+.|+++ |+.+..
T Consensus 249 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 324 (412)
T 2x5d_A 249 MAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEG---DQQCVRDIARQYQQRRDVLVKGLREA-GWMVEN 324 (412)
T ss_dssp CTTSCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHS---CSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCC
T ss_pred CcccceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC
Confidence 99999999999999999998877766778999999999999986 35789999999999999999999988 888888
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
|.+|+|+|++++...+ ..+..++++.|++++||.+.||..|+. ++++||+++.+++++++++++|.++++
T Consensus 325 ~~~g~~~~~~~~~~~~--------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 325 PKASMYVWAKIPEPYA--------HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp CSBSSEEEEECCTTTG--------GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CCeeeEEEEEcCCccC--------CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 8999999999974310 014678999988766999999998863 579999999999999999999999998
Q ss_pred hhC
Q 012095 464 TLR 466 (471)
Q Consensus 464 ~~~ 466 (471)
++.
T Consensus 397 ~~~ 399 (412)
T 2x5d_A 397 ADG 399 (412)
T ss_dssp HTT
T ss_pred hcC
Confidence 754
No 5
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=1.2e-53 Score=429.96 Aligned_cols=380 Identities=43% Similarity=0.678 Sum_probs=334.3
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++.+..+.+.+.. .+++|+|+.|++++++|+.+.+++.+++.++..+|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 78 (389)
T 1gd9_A 3 LSDRLELVSASEIRKLFDIAAG----MKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKK 78 (389)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHT----CSSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHhHhCChhHHHHHHHHHhh----hcCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 5677888888887777665432 256999999999988889999999999877667898888999999999999999
Q ss_pred HhCCCCCCCc-EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTPDQ-ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~~-i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|.++++++ |++|+|+++++..++++++++||.|++++|+|+++...++..|++++.+|++.+++|.+|+++|+++++
T Consensus 79 ~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 79 QNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp HHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC
T ss_pred HhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcC
Confidence 8898778899 999999999999999999999999999999999999999999999999998765568899999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++||||||.++|.+++++|+++|++| |++||+||+|.++.+++....++..+.+..++++++.||||.+|+
T Consensus 159 ~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 237 (389)
T 1gd9_A 159 DKTRALIINSPCNPTGAVLTKKDLEEIADFVVEH-DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAM 237 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTC
T ss_pred cCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCC
Confidence 8899999999999999999999999999999999 999999999999988764344555554435789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
+|+|+||+++++++++.+........++++.+.|.++.++|+. ... +++++++.++++++++.+.|+++ |+++.
T Consensus 238 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 313 (389)
T 1gd9_A 238 TGWRLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKD---ERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTV 313 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCC
T ss_pred cccceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhC---CCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 9999999999999999998887777778999999999999985 244 78999999999999999999988 89888
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.|.+++|+|++++.. + .+..++++.|++++||.+.||..|+. ++++|++++.+++++++++++|++++
T Consensus 314 ~~~~~~~~~~~~~~~-~---------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~~ 383 (389)
T 1gd9_A 314 KPKGAFYIFPRIRDT-G---------LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRMERVL 383 (389)
T ss_dssp CCCBTTEECCBCGGG-T---------CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCCeeeEEEEeccCC-C---------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 899999999988741 0 26788999988566999999998874 57999999999999999999999999
Q ss_pred HhhC
Q 012095 463 LTLR 466 (471)
Q Consensus 463 ~~~~ 466 (471)
++.+
T Consensus 384 ~~~~ 387 (389)
T 1gd9_A 384 KERK 387 (389)
T ss_dssp HHTT
T ss_pred Hhcc
Confidence 8754
No 6
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=7.4e-54 Score=436.27 Aligned_cols=390 Identities=28% Similarity=0.504 Sum_probs=338.5
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC--CCCCCCCCCHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF--TRYTPNAGTLELRSAICHK 144 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~ 144 (471)
.+++++..++++.+.++.+.+ .++++|+|+.|+|++++|+.+.+++.+++.++. .+|++..|..++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 79 (422)
T 3fvs_A 5 LQARRLDGIDYNPWVEFVKLA-----SEHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASF 79 (422)
T ss_dssp CSCGGGTTCCCCHHHHHHHHH-----HTSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred hHHHHhhccCccHHHHHHHHh-----hcCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHH
Confidence 367788888888877765543 245799999999999999999999999987654 6898888999999999999
Q ss_pred HHHHhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC----------CCC
Q 012095 145 LKEENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI----------SEN 213 (471)
Q Consensus 145 ~~~~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~----------~~~ 213 (471)
+++.+|+++++ ++|++|+|+++++..++++++++||+|++++|+|.+|...++..|++++.++++. +++
T Consensus 80 ~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~ 159 (422)
T 3fvs_A 80 FGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSN 159 (422)
T ss_dssp HHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCBGGG
T ss_pred HHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEecccccccccccccccC
Confidence 99999988888 7999999999999999999999999999999999999999999999999999975 236
Q ss_pred CcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc
Q 012095 214 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (471)
Q Consensus 214 ~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (471)
|.+|++++++++++++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++....++..+....++
T Consensus 160 ~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 238 (422)
T 3fvs_A 160 WQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQHISIASLPGMWER 238 (422)
T ss_dssp SBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred CCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccCCCCCCChhhcccccCc
Confidence 78999999999998999999999999999999999999999999999 99999999999999987666677777655689
Q ss_pred eEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-----cCCChHHHHHHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRERR 368 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-----~~~~~~~~~~~~~~~~~~r 368 (471)
++++.||||.+|++|+|+||+++++++++.+........++++++.|.++.++|.. +. ..++++++++.+++++
T Consensus 239 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~ 317 (422)
T 3fvs_A 239 TLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQ-PSSYFVQFPQAMQRCR 317 (422)
T ss_dssp EEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTC-TTCHHHHHHHHHHHHH
T ss_pred EEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccc-hHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887777788999999999999974 22 2578899999999999
Q ss_pred HHHHHHhcCCCCCeeeCCCcceEEeEecCCccC-Cc-ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------CCc
Q 012095 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SE-AEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------DTC 439 (471)
Q Consensus 369 ~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------~~~ 439 (471)
+++.+.|+++ |+.+..|++++|+|++++.... .. ..+........+++++|++++||.+.||+.|+. +++
T Consensus 318 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~ 396 (422)
T 3fvs_A 318 DHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHY 396 (422)
T ss_dssp HHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSE
T ss_pred HHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCe
Confidence 9999999998 9998899999999999864210 00 000000001568899888878999999999863 589
Q ss_pred EEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 440 IRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 440 iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+||+++.++++|++++++|++++++
T Consensus 397 iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 397 IRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999875
No 7
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-54 Score=445.93 Aligned_cols=383 Identities=23% Similarity=0.415 Sum_probs=326.3
Q ss_pred cCCChHHHHHHHHHHH----HhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHh
Q 012095 75 VKPSKTVAITDQATAL----AQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEEN 149 (471)
Q Consensus 75 ~~~~~~~~~~~~~~~~----~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~ 149 (471)
++++.+..+.+.+..+ +..++++|+|+.|.|++++|+.+.+++.+++.+ +..+|++..|..+||+++++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 112 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIY 112 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTT
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 6677777776665443 235778999999999999999999999998865 45789888899999999999999888
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC----------CCcCCHH
Q 012095 150 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE----------NFLLDPK 219 (471)
Q Consensus 150 g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~----------~~~ld~e 219 (471)
|.++++++|++|+|+++++..+++++++|||+|++++|+|..|...++..|++++.+++++++ +|.+|++
T Consensus 113 g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~ 192 (447)
T 3b46_A 113 NTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFE 192 (447)
T ss_dssp TSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHH
T ss_pred CCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHH
Confidence 988888999999999999999999999999999999999999999999999999999987543 6789999
Q ss_pred HHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-CCCCCceEEEe
Q 012095 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVN 298 (471)
Q Consensus 220 ~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~ 298 (471)
+|++++++++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.|++ ...++..+ ++..+++++++
T Consensus 193 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~ 270 (447)
T 3b46_A 193 QFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKH-NVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVG 270 (447)
T ss_dssp HHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEE
T ss_pred HHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEe
Confidence 99999988899999999999999999999999999999999 99999999999998876 33455554 22357899999
Q ss_pred cCCcccCccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 299 GFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
||||.+|++|||+||+++ ++++++.+........++++++.|.++.++|+... .+.+++++++.++++++++.+.|++
T Consensus 271 S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (447)
T 3b46_A 271 SAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDAL-KIGYFEKMRQEYINKFKIFTSIFDE 349 (447)
T ss_dssp EHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCc-chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 99999999887766777889999999999998621 1567899999999999999999998
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccC----CCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------CCcEEEEeec
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEG----FGKIENSESLCRYLLDKAQVALVPGDAFGD-------DTCIRISYAA 446 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------~~~iRis~~~ 446 (471)
+ |+.+..|++|+|+|++++...-+.... .+...+..+++++|++++||.+.||+.|+. ++++||+++.
T Consensus 350 ~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~ 428 (447)
T 3b46_A 350 L-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCK 428 (447)
T ss_dssp H-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCS
T ss_pred C-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeC
Confidence 8 888888999999999997520000000 000024668999998777999999998864 5799999999
Q ss_pred CHHHHHHHHHHHHHH
Q 012095 447 SLTTLQAAVERIKKG 461 (471)
Q Consensus 447 ~~e~i~~~~~~l~~~ 461 (471)
++++|++++++|+++
T Consensus 429 ~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 429 DDAYLENAVERLKLL 443 (447)
T ss_dssp CHHHHHHHHHHGGGG
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999873
No 8
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=1.1e-53 Score=438.61 Aligned_cols=379 Identities=19% Similarity=0.355 Sum_probs=331.2
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHH
Q 012095 63 QVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLEL 137 (471)
Q Consensus 63 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~l 137 (471)
+|+..++.+...++++.+.++.+... ++++|+|+.|.|+.. +++.+.+++.+++.+. ..+|++..|..+|
T Consensus 49 ~~~~~~s~~~~~~~~s~~~~~~~~~~-----~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~l 123 (448)
T 3aow_A 49 DVERFFSKKALEMRASEVRELLKLVE-----TSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPL 123 (448)
T ss_dssp CGGGGCCHHHHHCCCCHHHHHHHHHH-----TSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHH
T ss_pred chHHHhhHHHhcCCCcHHHHHHHhcc-----CCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHH
Confidence 46667899999999998877655322 457999999998754 6788999998888653 3689888999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCC
Q 012095 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 217 (471)
Q Consensus 138 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld 217 (471)
|+++++++.+.+|.+ ++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|++.+ ++|
T Consensus 124 r~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d 199 (448)
T 3aow_A 124 RETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE---GMK 199 (448)
T ss_dssp HHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EEC
T ss_pred HHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC---CCC
Confidence 999999998888977 8899999999999999999999999999999999999999999999999999998753 389
Q ss_pred HHHHHhhhc----c--CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC
Q 012095 218 PKVLESKLT----E--KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (471)
Q Consensus 218 ~e~l~~~l~----~--~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (471)
+++|+++++ + ++++|+ +++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++....++..++.
T Consensus 200 ~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~-~~~lI~De~y~~~~~~g~~~~~~~~~~~- 277 (448)
T 3aow_A 200 VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY-DFIVVEDDPYGELRYSGNPEKKIKALDN- 277 (448)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECSCTTCBCSSCCCCCTGGGCT-
T ss_pred HHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCCCcCHHhcCC-
Confidence 999999987 5 788885 699999999999999999999999999 9999999999999987765566666643
Q ss_pred CCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Q 012095 291 WERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (471)
Q Consensus 291 ~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~ 370 (471)
.+++++++||||.++ +|+|+||+++++++++.+.......++++++++|.++.++|+.+. ..++++++++.|++++++
T Consensus 278 ~~~vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~-~~~~~~~~~~~~~~~~~~ 355 (448)
T 3aow_A 278 EGRVIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGY-LEKHIPEIRKFYKPRRDA 355 (448)
T ss_dssp TSCEEEEEESTTTTC-GGGCCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccchhhcc-ccccEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHH
Confidence 578999999999999 999999999999999999888777777889999999999998631 157899999999999999
Q ss_pred HHHHhcC-CC-CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEe
Q 012095 371 LVKSFGE-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISY 444 (471)
Q Consensus 371 l~~~L~~-~~-g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~ 444 (471)
+.+.|++ +| |+.+..|.+|+|+|++++.. .+..+++++|+++ ||.+.||..|+. ++++|+++
T Consensus 356 l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~-----------~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~~iRls~ 423 (448)
T 3aow_A 356 MLEALEEFMPEGVKWTKPEGGMFIWVTLPDG-----------IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKNTMRLNF 423 (448)
T ss_dssp HHHHHHHHCCTTCEECCCSBSSEEEEECSTT-----------CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCSEEEEEC
T ss_pred HHHHHHHhCCCCeEEeCCCccEEEEEEcCCC-----------CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCCEEEEEe
Confidence 9999987 57 69988899999999999753 2678899999987 999999998853 57999999
Q ss_pred ec-CHHHHHHHHHHHHHHHHhhC
Q 012095 445 AA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 445 ~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. ++++|++++++|+++++++.
T Consensus 424 ~~~~~e~i~~~~~~L~~~l~~~~ 446 (448)
T 3aow_A 424 TYVDEDKIMEGIKRLAETIKEEL 446 (448)
T ss_dssp SSSCTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 98 78999999999999998753
No 9
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.5e-53 Score=428.16 Aligned_cols=375 Identities=38% Similarity=0.664 Sum_probs=333.6
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLK 146 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 146 (471)
++++++..++++.+.++...+.+....|+++|+|+.|++++++|+.+.+++.+++.....+|++..|..++|+++++++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 13 MVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp -CCHHHHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCSSCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 36778888888888888888777766788999999999998888999999999887666789888899999999999999
Q ss_pred HHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 147 EENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 147 ~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
+.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.+|++.+++|.+|+++|+++++
T Consensus 93 ~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 172 (389)
T 1o4s_A 93 ERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV 172 (389)
T ss_dssp HHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC
T ss_pred HHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc
Confidence 88898778899999999999999999999999999999999999999999999999999999765578899999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++ ...++..+....++++++.||||.+|+
T Consensus 173 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~ 250 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKR-NFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFSKSHSM 250 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEESTTTTTC
T ss_pred cCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeechhhcCC
Confidence 8899999999999999999999999999999999 99999999999988765 233455554335789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+........++++.+.|.++.++|..+ ++++++.++++++++.+.|+++ |+++..|
T Consensus 251 ~G~r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~------~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 323 (389)
T 1o4s_A 251 TGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD------NSYMVQTFKERKNFVVERLKKM-GVKFVEP 323 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC------CHHHHHHHHHHHHHHHHHHHHT-TCCCCCC
T ss_pred cccceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhc-CCeeecC
Confidence 99999999999999999988877667788999999999888752 6778889999999999999988 8888888
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.+++|+|++++ . +..++.++|++++||.+.||..|+.++++|++++.+++++++++++|.++++
T Consensus 324 ~~~~~~~~~~~-~------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 324 EGAFYLFFKVR-G------------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp SBSSEEEEECS-S------------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred CcceEEEEeCC-C------------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 99999999886 2 6788999988556999999999987889999999999999999999999875
No 10
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=5e-53 Score=426.82 Aligned_cols=373 Identities=25% Similarity=0.436 Sum_probs=322.3
Q ss_pred ccccccccc--CCChHHHHHHHHHHHHhc--CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCCCCCCCHHHH
Q 012095 67 SLSPRVNAV--KPSKTVAITDQATALAQA--GVSVIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTPNAGTLELR 138 (471)
Q Consensus 67 ~~s~~~~~~--~~~~~~~~~~~~~~~~~~--g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~~~~G~~~lr 138 (471)
.++++++.+ .++.++++...+..+... ++++|+|+.|+|++++|+.+.+++.+++.+. ..+|++..|..++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr 82 (398)
T 3ele_A 3 VVNESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETR 82 (398)
T ss_dssp SSCHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHH
T ss_pred chhHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHH
Confidence 467788887 678888887777665543 4679999999999999999999999988764 57898999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCC
Q 012095 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 217 (471)
Q Consensus 139 ~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld 217 (471)
+++++++.+.+|+++++++|++|+|+++++..++++++++| |+|++++|+|.++...++..|++++.+|++. ++|.+|
T Consensus 83 ~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d 161 (398)
T 3ele_A 83 AAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQID 161 (398)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSCC
T ss_pred HHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcCC
Confidence 99999999999988899999999999999999999999999 9999999999999999999999999999975 468899
Q ss_pred HHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 218 ~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~------~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
+++|++++++++++|++++||||||.+++.+++++|+++|++ | +++||+||+|.++.+++...+.... ..
T Consensus 162 ~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~---~~ 237 (398)
T 3ele_A 162 FDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR-PIFIIADEPYREIVYDGIKVPFVTK---YY 237 (398)
T ss_dssp HHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTS-CCEEEEECTTTTCBCTTCCCCCGGG---TC
T ss_pred HHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCC-CeEEEEeccccccccCCCCcCChHh---hc
Confidence 999999999899999999999999999999999999999999 9 9999999999999887643333322 25
Q ss_pred CceEEEecCCcccCccchhheeeEcCHHH------HHHHHHHHhc-ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAGPKHF------VAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~~~~~------i~~l~~~~~~-~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
+++++++||||.+|++|+|+||+++++++ .+.+...... ...+++.+.|.++..+++.. . .++.+
T Consensus 238 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~-----~~~~~ 309 (398)
T 3ele_A 238 DNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT---G-----DINAY 309 (398)
T ss_dssp SSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCC---C-----CHHHH
T ss_pred CCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCH---H-----HHHHH
Confidence 78999999999999999999999998874 3444443333 25567889998888777652 1 35778
Q ss_pred HHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012095 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 444 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~ 444 (471)
+++++++.+.|+++ |+.+..|.+++|+|++++.. +..++++.|. ++||.+.||..|+.++++||++
T Consensus 310 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~ 375 (398)
T 3ele_A 310 KENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALED------------DSNAFCEKAK-EEDVLIVAADGFGCPGWVRISY 375 (398)
T ss_dssp HHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSS------------CHHHHHHHHH-TTTEECEESGGGTCTTEEEEEC
T ss_pred HHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCC------------CHHHHHHHHH-HCCEEEeCccccCCCCeEEEEe
Confidence 88999999999888 89999999999999998753 6788888765 4599999999999889999999
Q ss_pred ecCHHHHHHHHHHHHHHHHhhC
Q 012095 445 AASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 445 ~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.+++++++++++|++++++++
T Consensus 376 ~~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 376 CVDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHhh
Confidence 9899999999999999998875
No 11
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.2e-53 Score=428.97 Aligned_cols=373 Identities=22% Similarity=0.365 Sum_probs=325.9
Q ss_pred cccccccCCChHHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~-~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++.++++++..+......+. ..|+++|+|+.|++++++|+.+.+++.+++. ...+|++..|..++|+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~ 81 (396)
T 3jtx_A 3 NTLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKR 81 (396)
T ss_dssp HHHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHH
Confidence 45667778887777665544433 3578999999999999999999999998775 467898888999999999999999
Q ss_pred HhCCC-CCCC-cEEEeCChHHHHHHHHHHhcCCC-----CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHH
Q 012095 148 ENGLS-YTPD-QILVSNGAKQSILQAVLAVCSPG-----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKV 220 (471)
Q Consensus 148 ~~g~~-~~~~-~i~it~G~~~al~~~~~~l~~~g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~ 220 (471)
.+|.+ ++++ +|++|+|+++++..++++++++| |+|+++.|+|.++...++..|++++.++++ +++|.+|+++
T Consensus 82 ~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~g~~~d~~~ 160 (396)
T 3jtx_A 82 RYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCP-APSFNPDWRS 160 (396)
T ss_dssp HTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEECC-TTTCCCCGGG
T ss_pred hcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeecC-CCCCccCHHH
Confidence 99987 7788 99999999999999999999997 799999999999999999999999999994 5678899999
Q ss_pred HHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc----CCCCCCceEE
Q 012095 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS----LPGMWERTLT 296 (471)
Q Consensus 221 l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~----~~~~~~~~i~ 296 (471)
+++++++++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....+... +....+++++
T Consensus 161 l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 239 (396)
T 3jtx_A 161 ISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKY-GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLM 239 (396)
T ss_dssp SCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEE
T ss_pred HHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEE
Confidence 9999988999999999999999999999999999999999 9999999999999887632222221 2223588999
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
+.||||.++++|+|+||+++++++++.+.......+++++.+.|.++.++|.. .+++.+.++.++++++.+.+.|.
T Consensus 240 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~ 315 (396)
T 3jtx_A 240 FTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSAMSIPVQRASIAAWDD----EQHVIDNRRLYQEKFERVIPILQ 315 (396)
T ss_dssp EEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeccccccCCcccceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887777788999999999999985 68899999999999999999998
Q ss_pred CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------CCcEEEEeecCH
Q 012095 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--------DTCIRISYAASL 448 (471)
Q Consensus 377 ~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--------~~~iRis~~~~~ 448 (471)
++ +.+..|.+++|+|++++.. +..++++.|++++||.+.||+.|+. ++++||+++.++
T Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~ 381 (396)
T 3jtx_A 316 QV--FDVKLPDASFYIWLKVPDG------------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADV 381 (396)
T ss_dssp TT--SCCCCCSSSSEEEEECTTS------------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCH
T ss_pred hc--CCccCCCeeEEEEEECCCC------------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCH
Confidence 86 4566789999999999752 6789999998777999999998875 479999999999
Q ss_pred HHHHHHHHHHHHHH
Q 012095 449 TTLQAAVERIKKGL 462 (471)
Q Consensus 449 e~i~~~~~~l~~~l 462 (471)
+++++++++|++++
T Consensus 382 ~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 382 ATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 12
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=3.1e-53 Score=432.84 Aligned_cols=391 Identities=23% Similarity=0.369 Sum_probs=324.3
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCC----CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHH
Q 012095 63 QVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPD----FDTPVLIAEAGINAIREG-FTRYTPNAGTLEL 137 (471)
Q Consensus 63 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~----~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~l 137 (471)
+|.+.++.. ....+.+++.+.+........++++|+|+.|+|+ +++++.+.+++.+++... ..+|++..|..++
T Consensus 23 ~w~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l 101 (427)
T 3dyd_A 23 MWSVRPSDM-AKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSS 101 (427)
T ss_dssp -CCCCCCC-----------------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHH
T ss_pred ccCcchhhH-hhcccchHHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHH
Confidence 566555543 3333445555554433322356789999999975 577899999999988764 4689899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCC
Q 012095 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD 217 (471)
Q Consensus 138 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld 217 (471)
|+++++++... |.++++++|++|+|+++++..+++.++++||+|++++|+|.+|...++..|++++.++++++++|.+|
T Consensus 102 r~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 180 (427)
T 3dyd_A 102 REEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEID 180 (427)
T ss_dssp HHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEEC
T ss_pred HHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCC
Confidence 99999999765 77778899999999999999999999999999999999999999999999999999999877788999
Q ss_pred HHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEE
Q 012095 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTV 297 (471)
Q Consensus 218 ~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (471)
++++++++++++++|++++||||||.+++.+++++|+++|++| ++++|+||+|.++.+++....++..+.. ..+++++
T Consensus 181 ~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~~i~Deay~~~~~~g~~~~~~~~~~~-~~~vi~~ 258 (427)
T 3dyd_A 181 LKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQ-CVPILADEIYGDMVFSDCKYEPLATLST-DVPILSC 258 (427)
T ss_dssp HHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTTTCBCSSCCCCCGGGGCS-SCCEEEE
T ss_pred HHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcCchhhccCCCcCccHHHhCC-CCcEEEE
Confidence 9999999988899999999999999999999999999999999 9999999999999987765555555543 4678999
Q ss_pred ecCCcccCccchhheeeEcC-------HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Q 012095 298 NGFSKAFAMTGWRLGYIAGP-------KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (471)
Q Consensus 298 ~S~SK~~g~~G~R~G~v~~~-------~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~ 370 (471)
+||||.|+++|+|+||++++ +++++.+...... .+++++++|.++.++|+.. ..+++++++++++++++.
T Consensus 259 ~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~--~~~~~~~~~~~~~~~~~~ 335 (427)
T 3dyd_A 259 GGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRT--PGEFYHNTLSFLKSNADL 335 (427)
T ss_dssp EESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHH
T ss_pred eeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987 5788888776543 4679999999999999842 368899999999999999
Q ss_pred HHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHH
Q 012095 371 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTT 450 (471)
Q Consensus 371 l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~ 450 (471)
+.+.|+++||+.+..|++++|+|++++... .....+..+++++|++++||.+.||..|+.++++||+++.++++
T Consensus 336 l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~------~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~ 409 (427)
T 3dyd_A 336 CYGALAAIPGLRPVRPSGAMYLMVGIEMEH------FPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVM 409 (427)
T ss_dssp HHHHHHHSTTEEEECCSBTTEEEEEECGGG------CTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHH
T ss_pred HHHHHhcCCCceecCCCeeEEEEEecCHhh------cCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHH
Confidence 999999998999888999999999886310 00012678899999866799999999999899999999999999
Q ss_pred HHHHHHHHHHHHHhhC
Q 012095 451 LQAAVERIKKGLLTLR 466 (471)
Q Consensus 451 i~~~~~~l~~~l~~~~ 466 (471)
+++++++|.+++++++
T Consensus 410 i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 410 MLEACSRIQEFCEQHY 425 (427)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998875
No 13
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=4.6e-53 Score=428.52 Aligned_cols=383 Identities=31% Similarity=0.522 Sum_probs=330.7
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAIC 142 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia 142 (471)
+.++++++.++++.+..+. .+.++...|+++|+|+.|.+ ++++|+.+.+++.+++......|++..|..++|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la 88 (406)
T 1xi9_A 10 IRASKRALSVEYAIRDVVL-PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIV 88 (406)
T ss_dssp CCCCHHHHTCCC--------CHHHHHHTTCCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHH
T ss_pred hhHHHHHhcCChhHHHHHH-HHHHHHHcCCCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Confidence 3467788888888787777 77777778889999999999 7888899999999988766668988889999999999
Q ss_pred HHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 143 HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 143 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
+++.+.+|+++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+++|.+|+++|+
T Consensus 89 ~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 168 (406)
T 1xi9_A 89 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 168 (406)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHH
Confidence 99999999888899999999999999999999999999999999999999999999999999999876457889999999
Q ss_pred hhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc-eEEEecCC
Q 012095 223 SKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFS 301 (471)
Q Consensus 223 ~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~S 301 (471)
+++++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++ ...++..++ .++ +++++|||
T Consensus 169 ~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~-~~~~~~~~~--~~~~~i~~~s~s 244 (406)
T 1xi9_A 169 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEY-EIPVISDEIYDLMTYEG-EHISPGSLT--KDVPVIVMNGLS 244 (406)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBSSS-CCCCHHHHC--SSSCEEEEEEST
T ss_pred HhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEEcCccccccCC-CCCCHHHcC--CCceEEEEeccc
Confidence 99988899999999999999999999999999999999 99999999999988743 233454553 477 89999999
Q ss_pred cccCccchhheeeE--cCH----HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 302 KAFAMTGWRLGYIA--GPK----HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 302 K~~g~~G~R~G~v~--~~~----~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
|.+|++|+|+||++ +++ ++++.+....... ++++.+.|.++.++|+. ..++++++++.++++++++.+.|
T Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L 320 (406)
T 1xi9_A 245 KVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTG---PMDYLKEYMKKLKERRDYIYKRL 320 (406)
T ss_dssp TTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHS---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 999 9999998876655 67899999999999975 35668899999999999999999
Q ss_pred cCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHH
Q 012095 376 GELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQA 453 (471)
Q Consensus 376 ~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~ 453 (471)
++++|+.+..|.+++|+|++++...+ .+..++++.|++++||.+.||..|+. ++++||+++.+++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~ 391 (406)
T 1xi9_A 321 NEIPGISTTKPQGAFYIFPKIEVGPW---------KNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEE 391 (406)
T ss_dssp HTSTTEECCCCCBSSEECCEECSCSC---------SSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHH
T ss_pred HhCCCCeeecCCeeEEEEEecCccCC---------CCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHH
Confidence 99889988889999999988874100 16788999988556999999998875 68999999999999999
Q ss_pred HHHHHHHHHHhhC
Q 012095 454 AVERIKKGLLTLR 466 (471)
Q Consensus 454 ~~~~l~~~l~~~~ 466 (471)
++++|+++++++.
T Consensus 392 ~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 392 AMDRFEKFMKERL 404 (406)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 14
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.6e-53 Score=430.20 Aligned_cols=377 Identities=23% Similarity=0.370 Sum_probs=323.1
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
++++..++++.+..+...... ..|+++|+|+.|++++++++.+.+++.+++.+. ..+|++..|..++|+++++++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 100 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRKIE--HGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQR 100 (404)
T ss_dssp CHHHHTSCCCTTC-------C--CCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHHHh--cCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 445555665555444333221 356779999999999888899999999887432 35787778999999999999999
Q ss_pred HhCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|.++++ ++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.++++. ++|.+|+++|+++++
T Consensus 101 ~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~ 179 (404)
T 2o1b_A 101 QYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVDSQII 179 (404)
T ss_dssp HHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSCHHHH
T ss_pred HhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHHHhhc
Confidence 88987776 7999999999999999999999999999999999999999999999999999875 567789999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++|+||||.+++.+++++|+++|++| +++||+||+|.++.+++ ...++..+....++++++.||||.+|+
T Consensus 180 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~ 257 (404)
T 2o1b_A 180 DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGT-DTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNM 257 (404)
T ss_dssp HHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTS-SCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTC
T ss_pred cCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccC
Confidence 8899999999999999999999999999999999 99999999999988865 334455554334789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+......+.++++.+.|.++.++|+. ..++++++++.++++++++.+.|+++ |+.+..|
T Consensus 258 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 333 (404)
T 2o1b_A 258 SGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNH---YDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVHA 333 (404)
T ss_dssp GGGCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEECC
T ss_pred chhheEeEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecCC
Confidence 9999999999999999998887777778999999999999986 37889999999999999999999988 8988889
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
++|+|+|++++.. .+..+++++|++++||.+.||..|+. ++++||+++.+++++++++++|++++++
T Consensus 334 ~~g~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 334 KGGIYVWLETPPG-----------YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL 402 (404)
T ss_dssp CBSSEEEEECCTT-----------CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHGGGGG
T ss_pred CcceEEEEeCCCC-----------CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 9999999999743 16788999988666999999998874 6899999999889999999999998875
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
+
T Consensus 403 ~ 403 (404)
T 2o1b_A 403 Y 403 (404)
T ss_dssp G
T ss_pred h
Confidence 4
No 15
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-52 Score=421.09 Aligned_cols=367 Identities=25% Similarity=0.403 Sum_probs=321.2
Q ss_pred cCC-ChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 012095 75 VKP-SKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLS 152 (471)
Q Consensus 75 ~~~-~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 152 (471)
+++ +.+..+..........|+++|+|+.|++++++|+.+.+++.+++.++ ..+|++..|..++|+++++++.+.+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~ 83 (376)
T 2dou_A 4 VPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVG 83 (376)
T ss_dssp CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 344 55666666666665678899999999999888899999999887543 5678665788999999999999988987
Q ss_pred CCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcE
Q 012095 153 YTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRL 231 (471)
Q Consensus 153 ~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~ 231 (471)
++++ +|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.+|+ +++|.+|++++++++++++++
T Consensus 84 ~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~ 161 (376)
T 2dou_A 84 LDPRREALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKV 161 (376)
T ss_dssp CCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEE
T ss_pred CCCCccEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceE
Confidence 7777 9999999999999999999999999999999999999999999999999998 466789999999999888999
Q ss_pred EEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh
Q 012095 232 LILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL 311 (471)
Q Consensus 232 i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~ 311 (471)
|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ..++..+....+++++++||||.+|++|+|+
T Consensus 162 v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 239 (376)
T 2dou_A 162 LLLNYPNNPTGAVADWGYFEEALGLARKH-GLWLIHDNPYVDQVYEGE-APSPLALPGAKERVVELFSLSKSYNLAGFRL 239 (376)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGBSSSC-CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCC
T ss_pred EEECCCCCCcCccCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCC-CCChhhcCCCCCcEEEEecchhhcCChhhee
Confidence 99999999999999999999999999999 999999999999887652 3344444333578999999999999999999
Q ss_pred eeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceE
Q 012095 312 GYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFY 391 (471)
Q Consensus 312 G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~ 391 (471)
||+++++++++.+......++++++.+.|.++.++|+. ..+++++.++.++++++++.+.|+++ +.+..|.+|+|
T Consensus 240 G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~ 314 (376)
T 2dou_A 240 GFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKT---PKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMY 314 (376)
T ss_dssp EEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSE
T ss_pred EEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEE
Confidence 99999999999999887777778899999999999985 37889999999999999999999987 78878889999
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+|+++++. .+..++.++|+++ ||.+.||..|+. ++++|++++.+++++++++++|++++
T Consensus 315 ~~~~~~~~-----------~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 315 LWGRLPEG-----------VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp EEEECCTT-----------CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred EEEECCCC-----------CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 99999753 1678899999887 999999998874 58999999999999999999998764
No 16
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=5.7e-52 Score=417.48 Aligned_cols=373 Identities=28% Similarity=0.482 Sum_probs=323.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..+.++.+..+..... ..++|+|+.|.+++++|+.+.+++.+++..+..+|++..|..++|+++++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~ 82 (386)
T 1u08_A 8 PQSKLPQLGTTIFTQMSALAQ-----QHQAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTER 82 (386)
T ss_dssp CCCSCCCCCCCHHHHHHHHHH-----HTTCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred cchhhhcCCccHHHHHHHHHh-----cCCeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHH
Confidence 356677777766555433322 145899999999988889999999999876667898888999999999999999
Q ss_pred HhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 148 ~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+|.+++++ +|++|+|+++++..++++++++||.|++++|+|+++...++..|++++.++++.+ +|.+|+++|+++++
T Consensus 83 ~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~ 161 (386)
T 1u08_A 83 LYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLS 161 (386)
T ss_dssp HHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCC
T ss_pred HhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhc
Confidence 899888888 9999999999999999999999999999999999999999999999999998753 57799999999998
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++++|++++|+||||.++|.+++++|+++|++| +++||+||+|.++.+++....++..+....++++++.||||.+|+
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 240 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATVWQQADFAALWQAIAGH-EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHM 240 (386)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTS-CCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTC
T ss_pred ccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCC
Confidence 8899999999999999999999999999999999 999999999999988765445555543235789999999999999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
+|+|+||+++++++++.+........++++.+.|.++.++|+. ..++++++++.++++++++.+.|+++ |+++..|
T Consensus 241 ~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 316 (386)
T 1u08_A 241 TGWKVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRA---EPEHYLALPDFYRQKRDILVNALNES-RLEILPC 316 (386)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHH---CTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCC
T ss_pred cccceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence 9999999999999999998877666777899999999999986 36789999999999999999999998 8998888
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----CCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----DDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
++|+|+|++++... ..+..+++++|++++||.+.||..|+ .++++||+++.++++|++++++|++
T Consensus 317 ~~g~~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 317 EGTYFLLVDYSAVS---------TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp CBSSEEEEECTTTC---------CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred CceEEEEEecCCCC---------CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 99999999987520 01578899988876799999998885 3579999999999999999999864
No 17
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-52 Score=425.79 Aligned_cols=382 Identities=31% Similarity=0.519 Sum_probs=328.7
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++.+..+...+. ..++|+|+.|.+++++|+.+.+++.+++.++...|++..|..+||+++++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~ 77 (411)
T 2o0r_A 3 TVSRLRPYATTVFAEMSALAT-----RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRR 77 (411)
T ss_dssp CCGGGGGGSSCHHHHHHHHHH-----TTTCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhHhHhcCccHHHHHHHHhh-----cCCeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 567788888876655443322 245899999999988889999999999876667898888999999999999999
Q ss_pred HhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhh
Q 012095 148 ENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKL 225 (471)
Q Consensus 148 ~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l 225 (471)
.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+ ++|.+|+++|++++
T Consensus 78 ~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l 157 (411)
T 2o0r_A 78 HFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAV 157 (411)
T ss_dssp HHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHC
T ss_pred HcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhh
Confidence 999878888 9999999999999999999999999999999999999999999999999998754 35779999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++....++..++...++++++.||||.+|
T Consensus 158 ~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (411)
T 2o0r_A 158 TPRTRALIINSPHNPTGAVLSATELAAIAEIAVAA-NLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN 236 (411)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT
T ss_pred ccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC
Confidence 88899999999999999999999999999999999 99999999999998876555556555444578999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+........++.+++.|.++.++|+. ..++++++++.++++++++.+.|+++ |+.+..
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 312 (411)
T 2o0r_A 237 CTGWKIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDT---EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHD 312 (411)
T ss_dssp CTTTCEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECC
T ss_pred CccceEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecC
Confidence 99999999999999999998877666677888999999999986 37889999999999999999999988 899888
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-------------CCCcEEEEeecCHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-------------DDTCIRISYAASLTTLQ 452 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-------------~~~~iRis~~~~~e~i~ 452 (471)
|++|+|+|++++... ..+..+++++|++++||.+.||..|. .++++||+++.++++++
T Consensus 313 ~~~g~~~~~~~~~~~---------~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~ 383 (411)
T 2o0r_A 313 SYGTYFLCADPRPLG---------YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLD 383 (411)
T ss_dssp CCBSSEEEEECGGGT---------CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHH
T ss_pred CCeeEEEEEecCCCC---------CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHH
Confidence 999999999997520 01578899988866699999998883 24689999998999999
Q ss_pred HHHHHHHHHHHhhCCC
Q 012095 453 AAVERIKKGLLTLRPG 468 (471)
Q Consensus 453 ~~~~~l~~~l~~~~~~ 468 (471)
+++++|++++++.+.+
T Consensus 384 ~~~~~l~~~~~~~~~~ 399 (411)
T 2o0r_A 384 EAIRRLSVLAERPATG 399 (411)
T ss_dssp HHHHHHGGGGC-----
T ss_pred HHHHHHHHHHhccCcC
Confidence 9999999988766544
No 18
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.4e-52 Score=423.29 Aligned_cols=383 Identities=31% Similarity=0.520 Sum_probs=328.5
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEE 148 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~ 148 (471)
.++..++++.+..+.+. ..+.++|+|+.|+|++++|+.+.+++.+++.+. ..+|++..|..++|+++++++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~-----~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~ 77 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKL-----AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKI 77 (410)
T ss_dssp GGGTTCCCCHHHHTTTT-----TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred hhhccCCccHHHHHHHH-----hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHH
Confidence 45666677766554332 235679999999999999999999999988653 458988889999999999999999
Q ss_pred hCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC---------CCCCcCCH
Q 012095 149 NGLSYTP-DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI---------SENFLLDP 218 (471)
Q Consensus 149 ~g~~~~~-~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~---------~~~~~ld~ 218 (471)
+|.++++ ++|++|+|+++++..++++++++||.|+++.|+|..+...++..|++++.++++. +.+|.+|+
T Consensus 78 ~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~ 157 (410)
T 3e2y_A 78 YQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDP 157 (410)
T ss_dssp HTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCH
T ss_pred hCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCH
Confidence 9998888 8999999999999999999999999999999999999999999999999999873 24577899
Q ss_pred HHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe
Q 012095 219 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (471)
Q Consensus 219 e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (471)
+++++++++++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..+....++++++.
T Consensus 158 ~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 236 (410)
T 3e2y_A 158 RELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKH-DTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIG 236 (410)
T ss_dssp HHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEE
T ss_pred HHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHc-CcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEe
Confidence 999999988999999999999999999999999999999999 9999999999999988766667777766678999999
Q ss_pred cCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-----cCCChHHHHHHHHHHHHHHHHHHH
Q 012095 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRERRDFLVK 373 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-----~~~~~~~~~~~~~~~~~~r~~l~~ 373 (471)
||||.+|++|+|+||+++++++++.+........++++++.|.++.++|.. .. ...+++++++.++++++++.+
T Consensus 237 S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 315 (410)
T 3e2y_A 237 SAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDD-PECYFNSLPKELEVKRDRMVR 315 (410)
T ss_dssp EHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTS-TTSHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCceEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccc-hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999887777788999999999999873 11 267899999999999999999
Q ss_pred HhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------CCcEEEEeec
Q 012095 374 SFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------DTCIRISYAA 446 (471)
Q Consensus 374 ~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------~~~iRis~~~ 446 (471)
.|+++ |+.+..|++++|+|++++..............+..+++++|++++||.+.||+.|+. ++++||+++.
T Consensus 316 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~ 394 (410)
T 3e2y_A 316 LLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIK 394 (410)
T ss_dssp HHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECCC
T ss_pred HHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEcC
Confidence 99998 999889999999999986531100000000012458888888778999999999864 4799999999
Q ss_pred CHHHHHHHHHHHHH
Q 012095 447 SLTTLQAAVERIKK 460 (471)
Q Consensus 447 ~~e~i~~~~~~l~~ 460 (471)
++++|++++++|++
T Consensus 395 ~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 395 KDSTLDAAEEIFRA 408 (410)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999875
No 19
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.2e-52 Score=424.43 Aligned_cols=390 Identities=25% Similarity=0.442 Sum_probs=329.7
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc---CCCCCCCCCCCHHHHHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE---GFTRYTPNAGTLELRSAIC 142 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~---~~~~Y~~~~G~~~lr~~ia 142 (471)
+.+++++....++.+..+.+... ..++|+|+.|.+++++|+.+.+++.+++.. ...+|++..|..+++++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la 87 (429)
T 1yiz_A 13 FDLPKRYQGSTKSVWVEYIQLAA-----QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALS 87 (429)
T ss_dssp CCSSSSCCCCTTCHHHHHHHHHH-----HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHH
T ss_pred cchhHHhhhCCchHHHHHHHHhc-----cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHH
Confidence 33567777777766554433322 235899999999988899999999998865 3568988889999999999
Q ss_pred HHHHHHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC--------C
Q 012095 143 HKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE--------N 213 (471)
Q Consensus 143 ~~~~~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~--------~ 213 (471)
+++.+.+|.+++++ +|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.+|++.++ +
T Consensus 88 ~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 167 (429)
T 1yiz_A 88 KLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSAD 167 (429)
T ss_dssp HHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGG
T ss_pred HHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccC
Confidence 99999889877888 99999999999999999999999999999999999999999999999999987653 5
Q ss_pred CcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc
Q 012095 214 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (471)
Q Consensus 214 ~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (471)
|.+|++.|++++++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++....++..++...++
T Consensus 168 ~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 246 (429)
T 1yiz_A 168 WVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKW-NVLCVSDEVYEHMVFEPFEHIRICTLPGMWER 246 (429)
T ss_dssp CBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTSCCCCGGGSTTTGGG
T ss_pred cccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccccccccCCCCCcChhhccCCcCc
Confidence 78999999999988899999999999999999999999999999999 99999999999998876555566555434678
Q ss_pred eEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-----cCCChHHHHHHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-----GYAGGEVVSKMVKAFRERR 368 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-----~~~~~~~~~~~~~~~~~~r 368 (471)
++++.||||.+|++|+|+||+++++++++.+.......+++.+++.|.++.++|+. +.. .++++++++.+++++
T Consensus 247 ~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 325 (429)
T 1yiz_A 247 TITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSP-ECYFNSISGELMAKR 325 (429)
T ss_dssp EEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTST-TSHHHHHHHHHHHHH
T ss_pred eEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccch-HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877767778999999999999986 432 678999999999999
Q ss_pred HHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCc-ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------CCcE
Q 012095 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE-AEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------DTCI 440 (471)
Q Consensus 369 ~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------~~~i 440 (471)
+++.+.|.++ |+.+..|.+|+|+|++++...... ........+..+++++|++++||.+.||..|+. ++++
T Consensus 326 ~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~i 404 (429)
T 1yiz_A 326 DYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFV 404 (429)
T ss_dssp HHHHHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEE
T ss_pred HHHHHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeE
Confidence 9999999988 898888889999999997530000 000000014678898888667999999988863 5799
Q ss_pred EEEeecCHHHHHHHHHHHHHHHH
Q 012095 441 RISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 441 Ris~~~~~e~i~~~~~~l~~~l~ 463 (471)
||+++.++++|++++++|+++++
T Consensus 405 Ris~~~~~e~i~~~l~~l~~~l~ 427 (429)
T 1yiz_A 405 RYCFFKKDENLQKAAEILRKWKG 427 (429)
T ss_dssp EEECCSCHHHHHHHHHHHHHHSC
T ss_pred EEEecCCHHHHHHHHHHHHHhcc
Confidence 99999999999999999998864
No 20
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=5e-53 Score=426.87 Aligned_cols=367 Identities=12% Similarity=0.112 Sum_probs=297.1
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---C--CCChHHHHHHHHHHH-H-cCCCCCCCCCCCHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---D--FDTPVLIAEAGINAI-R-EGFTRYTPNAGTLELRSA 140 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~--~~~p~~v~~a~~~~~-~-~~~~~Y~~~~G~~~lr~~ 140 (471)
+..++..++++++..+.+.++.. ..+++|+|+.|.+ + +.+++.+.++.. .+ . ...++|+|..|.++||++
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~~~--~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 4 LLSSLENIEVDNILKTAREFKED--TCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp GGGGCCCCCCCHHHHHHHHHTTS--SCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred hhhcCCCCCCChHHHHHHHHhcC--CCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 45688889999887776655432 3457999999972 2 345788888877 43 3 356789999999999999
Q ss_pred HHHHHHHHhCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcC
Q 012095 141 ICHKLKEENGLSYTPDQ--ILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (471)
Q Consensus 141 ia~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~l 216 (471)
+++++.+.++..+++++ |++|+|+++++.+++.++++ | |+|++++|+|++|...++.+|++++.+|+..+++|++
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 99999777666667764 59999999999999999988 9 9999999999999999999999999999854557899
Q ss_pred CHHHHHhhhcc--CCcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC--ccccccCCCCC
Q 012095 217 DPKVLESKLTE--KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGMW 291 (471)
Q Consensus 217 d~e~l~~~l~~--~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~ 291 (471)
|++.+++++++ +++++++++| |||||.+++++++++|+++|++| +++||+||+|.++.+++.. ..++..+....
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~-~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~ 238 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHK-KHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN 238 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CeEEEEecCcccccCCCcccchHHHHHHHhcC
Confidence 99999999864 5678888765 89999999999999999999999 9999999999999886421 22233332335
Q ss_pred CceEEEecCCcccCccchhheeeEc---CHHHHHHHH----HHHhcccCCCChHHHHHHHHHHhccCCC---hHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACN----KIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMV 361 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~---~~~~i~~l~----~~~~~~~~~~~~~~q~aa~~~L~~~~~~---~~~~~~~~ 361 (471)
+++|+++||||+|+|+|||+||+++ ++++++.+. ...+....+++.++|.++..+|.++... .++++.++
T Consensus 239 ~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~ 318 (405)
T 3k7y_A 239 IAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLS 318 (405)
T ss_dssp CCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7999999999999999999999853 677665543 3344455577899999999998852111 34467778
Q ss_pred HHHHHHHHHHHHHhc----CCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 362 KAFRERRDFLVKSFG----ELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~----~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
++|+++|+.+.+.|+ ++. +|++.+|+||||+|++++. +++++| +++||++.||.
T Consensus 319 ~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~----------------~~~~~L-~~~gV~v~p~~-- 379 (405)
T 3k7y_A 319 QRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA----------------KIAEHL-KTHHIYIINNG-- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG----------------GGTTTT-TTTTEECCTTS--
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH----------------HHHHHH-HHCCEeecCCC--
Confidence 889999999999999 762 2788899999999987752 345667 77899999974
Q ss_pred CCCCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 435 GDDTCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 435 ~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
|||++. +++++++++++|+++++.
T Consensus 380 ------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 ------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp ------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred ------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 999987 889999999999998864
No 21
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=1.1e-51 Score=412.95 Aligned_cols=365 Identities=34% Similarity=0.579 Sum_probs=324.1
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++++.++...+......|+++|+|+.|++++++|+.+.+++.+++..+..+|++..|..++|+++++++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~ 81 (370)
T 2z61_A 2 LSKRLLNFESFEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKD 81 (370)
T ss_dssp CCHHHHHCCCCTTHHHHHHHHHHHHTTCCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hhhhhhhccccHHHHHHHHHHHHHhcCCCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHH
Confidence 46677788888888888877777677889999999999988889999999999877677898888999999999999999
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|+++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++ +|+++|++++++
T Consensus 82 ~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l~~ 153 (370)
T 2z61_A 82 KYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEALSD 153 (370)
T ss_dssp HSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHCCS
T ss_pred HhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhccc
Confidence 899888899999999999999999999999999999999999999999999999999987 589999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++|+||||.+++.+ |.++|++| +++||+||+|.++.+++. ..++..+++..++++++.||||.+|++
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~----l~~~~~~~-~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~~~~ 227 (370)
T 2z61_A 154 KTKAIIINSPSNPLGEVIDRE----IYEFAYEN-IPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLYAMT 227 (370)
T ss_dssp SEEEEEEESSCTTTCCCCCHH----HHHHHHHH-CSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTTTCG
T ss_pred CceEEEEcCCCCCcCcccCHH----HHHHHHHc-CCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhccCCc
Confidence 899999999999999999955 99999999 999999999999888652 345555543467899999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-cCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
|+|+||+++++++++.+........++++++.|.++.++|+. + .++++++++.++++++++.+.|+++ |+++..|
T Consensus 228 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 303 (370)
T 2z61_A 228 GWRIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKET---EREINSMIKEFDRRRRLVLKYVKDF-GWEVNNP 303 (370)
T ss_dssp GGCCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCC
T ss_pred cceEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCC
Confidence 999999999999999998887777778999999998888863 2 5778899999999999999999988 8888889
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
++|+|+|++++. +..++.++|++++||.+.||..|+. ++++|++++.+++++++++++|+++++
T Consensus 304 ~~~~~~~~~~~~-------------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 304 IGAYYVFPNIGE-------------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp CBTTEECCBCSS-------------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred CcceEEEEecCC-------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 999999998863 4678999988556999999998875 689999999999999999999998874
No 22
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=5.3e-52 Score=423.43 Aligned_cols=380 Identities=20% Similarity=0.280 Sum_probs=316.2
Q ss_pred cccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHH--HHHHH---------HHHHHcCCCCCCCC
Q 012095 63 QVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVL--IAEAG---------INAIREGFTRYTPN 131 (471)
Q Consensus 63 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~--v~~a~---------~~~~~~~~~~Y~~~ 131 (471)
+|...+++++..++++++.++.+.+.. .++++|+|+.|.|+..+++. +..++ ..... ...+|++.
T Consensus 2 ~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~i~l~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~~ 77 (425)
T 2r2n_A 2 NYARFITAASAARNPSPIRTMTDILSR---GPKSMISLAGGLPNPNMFPFKTAVITVENGKTIQFGEEMMK-RALQYSPS 77 (425)
T ss_dssp CGGGGSCHHHHTCCCCSGGGHHHHHHH---SCTTCEECCCCCCCGGGCSEEEEEEEETTSCCEEECHHHHH-HHTSCCCT
T ss_pred chhHHHHHHHhcCCCchHHHHHHHhhc---CCCCeEEcCCcCCCchhCCHHHHHHHHhhcccccccccchh-hhcCCCCC
Confidence 455568899999999988887765542 24579999999998654321 00000 11111 13579999
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCC-------CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEE
Q 012095 132 AGTLELRSAICHKLKEENGLSYT-------PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPV 204 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~ 204 (471)
.|+++||+++++++.+.+|.+.+ +++|++|+|+++++..+++++++|||+|++++|+|.++...++..|++++
T Consensus 78 ~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 157 (425)
T 2r2n_A 78 AGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNII 157 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEE
Confidence 99999999999999999998764 37999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCcCCHHHHHhhhc------------cCCcEEEE-cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCC
Q 012095 205 ILPTRISENFLLDPKVLESKLT------------EKSRLLIL-CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY 271 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~------------~~~~~i~i-~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y 271 (471)
.+|++.+ ++|+++|+++++ +++++|++ ++||||||.+++.+++++|+++|++| +++||+||+|
T Consensus 158 ~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~-~~~li~De~~ 233 (425)
T 2r2n_A 158 NVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDDPY 233 (425)
T ss_dssp EECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTT
T ss_pred EeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECCc
Confidence 9998642 489999999886 36788876 79999999999999999999999999 9999999999
Q ss_pred CccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc--
Q 012095 272 EHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-- 349 (471)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-- 349 (471)
.++.|++....++..++. .+++++++||||.++ +|+|+||+++++++++.+........++++.++|.++.++|+.
T Consensus 234 ~~~~~~g~~~~~~~~~~~-~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~ 311 (425)
T 2r2n_A 234 YFLQFNKFRVPTFLSMDV-DGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWG 311 (425)
T ss_dssp GGGBSSSSCCCCTGGGCT-TSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCccccCC-CCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcc
Confidence 999987765566666653 578999999999998 9999999999999999999888777788999999999999874
Q ss_pred -cCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCC-eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHH-HHHHHHcCC
Q 012095 350 -GYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGV-KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESL-CRYLLDKAQ 425 (471)
Q Consensus 350 -~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~-~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Ll~~~g 425 (471)
+. ..+|++++++.|+++++++.+.|++ ++|+ .+..|.+|+|+|++++... +..++ .+.|. ++|
T Consensus 312 ~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~-----------~~~~~~~~~l~-~~g 378 (425)
T 2r2n_A 312 EEG-FMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGIN-----------DVKELIEEKAV-KMG 378 (425)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCS-----------CCHHHHHTHHH-HTT
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCC-----------CHHHHHHHHHH-HCC
Confidence 11 1477899999999999999999987 6776 5677899999999998632 44554 55555 569
Q ss_pred EEEECCCCCCC-----CCcEEEEee-cCHHHHHHHHHHHHHHHHhh
Q 012095 426 VALVPGDAFGD-----DTCIRISYA-ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 426 V~v~pg~~f~~-----~~~iRis~~-~~~e~i~~~~~~l~~~l~~~ 465 (471)
|.+.||..|+. .+++||+++ .+++++++++++|++++++.
T Consensus 379 v~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 379 VLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999874 379999998 59999999999999998753
No 23
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.7e-52 Score=419.30 Aligned_cols=378 Identities=27% Similarity=0.474 Sum_probs=333.6
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
|++++..++++++.++...+..+...|+++|+|+.|++++++|+.+.+++ +++.++..+|++..|..++++++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~ 94 (409)
T 2gb3_A 16 FSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPDLKTPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKR 94 (409)
T ss_dssp CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCCSCCCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCCCCCCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 78888899998888887777777778889999999999988888999999 88766567898888999999999999998
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+|+++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.+++|.+ +++|++++++
T Consensus 95 ~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~ 173 (409)
T 2gb3_A 95 RQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLESFINE 173 (409)
T ss_dssp TSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCT
T ss_pred HhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCc
Confidence 889888889999999999999999999999999999999999999999999999999999875456666 8999999988
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCcc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 307 (471)
++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+++. ..++ +....+++++++||||.+|++
T Consensus 174 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~Dea~~~~~~~~~-~~~~--~~~~~~~~i~~~s~sK~~g~~ 249 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERH-GLFLIVDEVYSEIVFRGE-FASA--LSIESDKVVVIDSVSKKFSAC 249 (409)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSSC-CCCG--GGSCCTTEEEEEESTTTTTCG
T ss_pred CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHc-CCEEEEECcccccccCCC-CCCc--cccCCCCEEEEecchhccCCc
Confidence 899999999999999999999999999999999 999999999999887652 2232 222246789999999999999
Q ss_pred chhheeeEcCH-HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eC
Q 012095 308 GWRLGYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM-SE 385 (471)
Q Consensus 308 G~R~G~v~~~~-~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~ 385 (471)
|+|+||+++++ ++++.+......+. +++.+.|.++.++|+. ...+++++++.++++++++.+.|+++ |+.+ ..
T Consensus 250 G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~ 324 (409)
T 2gb3_A 250 GARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNL---DDSFFDFVRETYRERVETVLKKLEEH-GLKRFTK 324 (409)
T ss_dssp GGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTC---CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCC
T ss_pred cceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeC
Confidence 99999999998 99999988776666 7899999999999975 37889999999999999999999988 8888 78
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHc-----CCEEEECCCCCCC-----CCcEEEEeecCHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK-----AQVALVPGDAFGD-----DTCIRISYAASLTTLQAAV 455 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~-----~gV~v~pg~~f~~-----~~~iRis~~~~~e~i~~~~ 455 (471)
|.+++|+|++++. .+..+++++|+++ +||.+.||..|+. ++++|++++.+++++++++
T Consensus 325 ~~~~~~~~~~~~~------------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~~ 392 (409)
T 2gb3_A 325 PSGAFYITAELPV------------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRAI 392 (409)
T ss_dssp CSBSSEEEEECSS------------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHHH
T ss_pred CCeeEEEEEEeCC------------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHHH
Confidence 8999999999872 1678899998877 5999999988864 5799999999999999999
Q ss_pred HHHHHHHHhhCCC
Q 012095 456 ERIKKGLLTLRPG 468 (471)
Q Consensus 456 ~~l~~~l~~~~~~ 468 (471)
++|++++++++.+
T Consensus 393 ~~l~~~l~~~~~~ 405 (409)
T 2gb3_A 393 DVLMEGLKMFCSS 405 (409)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHhhhc
Confidence 9999999887654
No 24
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=8.4e-52 Score=424.79 Aligned_cols=375 Identities=23% Similarity=0.383 Sum_probs=321.9
Q ss_pred cccccccccCCC-hHHHHHHHHHHHHh--cCCCeEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCHHHH
Q 012095 67 SLSPRVNAVKPS-KTVAITDQATALAQ--AGVSVIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTLELR 138 (471)
Q Consensus 67 ~~s~~~~~~~~~-~~~~~~~~~~~~~~--~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~~lr 138 (471)
.++.++..+++. .+..+......... .|+++|+|+.|++++++|+.+.+++.+++. .+...|++..|..+||
T Consensus 38 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr 117 (449)
T 3qgu_A 38 QRNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALR 117 (449)
T ss_dssp CCCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHH
T ss_pred hhhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHH
Confidence 456677777774 44465555444333 478899999999999999999999999887 4567898889999999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE----------EEEecC
Q 012095 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT----------PVILPT 208 (471)
Q Consensus 139 ~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~----------~~~v~~ 208 (471)
+++++++. +|+++++++|++|+|+++++..+ ..++++||.|++++|+|.++...++..|++ ++.+++
T Consensus 118 ~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~ 194 (449)
T 3qgu_A 118 EAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVC 194 (449)
T ss_dssp HHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEEC
T ss_pred HHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEec
Confidence 99999997 78888899999999999999988 888999999999999999999999999999 999999
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
+.++++..|++++ +++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++....++..++
T Consensus 195 ~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~ 268 (449)
T 3qgu_A 195 NPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKN-GSILVYDAAYALYISNPDCPKTIYEIP 268 (449)
T ss_dssp CGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCCTTSCSSGGGST
T ss_pred ccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcchHhhhcCCCCCCCHhhcc
Confidence 8766776676442 5789999999999999999999999999999999 999999999999998876566666666
Q ss_pred CCCCceEEEecCCcccCccchhheeeEcCHHHHH--------HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--------ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~--------~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~ 360 (471)
...++++++.||||.+|++|+|+||+++++++++ .+.........+++.++|.++.++|... ..++++++
T Consensus 269 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~ 346 (449)
T 3qgu_A 269 GADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPE--GLKEMNAM 346 (449)
T ss_dssp TGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHH--HHHHHHHH
T ss_pred CCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhc--CHHHHHHH
Confidence 5568899999999999999999999999988775 4555555556678999999999988741 14678999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CC
Q 012095 361 VKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DT 438 (471)
Q Consensus 361 ~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~ 438 (471)
+++++++++++.+.|+++ |+++..+++++|+|++++ . .+..++++.|++++||.+.||..|+. ++
T Consensus 347 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~ 413 (449)
T 3qgu_A 347 IKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFP-G-----------KPSWDVFAEILERCNIVTTPGSGYGPAGEG 413 (449)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECT-T-----------SCHHHHHHHHHHHHCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECC-C-----------CCHHHHHHHHHHHCCEEEecchHhCCCCCC
Confidence 999999999999999998 899988999999999997 2 27889999999888999999999875 58
Q ss_pred cEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 439 CIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 439 ~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+|||++..+++++++++++|++++++-
T Consensus 414 ~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 414 FVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred eEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 999999889999999999999998654
No 25
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=4.7e-52 Score=416.34 Aligned_cols=361 Identities=20% Similarity=0.310 Sum_probs=314.9
Q ss_pred cCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 012095 75 VKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT 154 (471)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~ 154 (471)
++++++.++.+....+...| ++|+|+.|++++++|+.+.+++.+.+ ....+|++..|..++|+++++++.+.+|.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g-~~i~l~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~ 81 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKK-RGLDLGIGEPQFETPKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKIELK 81 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSS-CCCBCSSCCCCSCCCHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred CCcchHHHHHHHHHhhhccC-CEEEeCCCCCCCCCCHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 45677777776666555567 89999999999999999999998876 44678988889999999999999999998788
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
+++|++|+|+++++..++++++++ ||+|+++.|+|.++...++..|++++.++++.++++. + ++++++.+++++|
T Consensus 82 ~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~-~l~~~~~~~~~~v 158 (376)
T 3ezs_A 82 ENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFT--P-SLNEKELQEVDLV 158 (376)
T ss_dssp GGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSC--C-CCCHHHHHHCSEE
T ss_pred HHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcc--h-hHHhhhccCCCEE
Confidence 999999999999999999999999 9999999999999999999999999999998665543 3 6777777789999
Q ss_pred EEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-----CCCceEEEecCCcccCcc
Q 012095 233 ILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-----MWERTLTVNGFSKAFAMT 307 (471)
Q Consensus 233 ~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-----~~~~~i~~~S~SK~~g~~ 307 (471)
++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++. ..++..... ..++++++.||||.+|++
T Consensus 159 ~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 236 (376)
T 3ezs_A 159 ILNSPNNPTGRTLSLEELISWVKLALKH-DFILINDECYSEIYENTP-PPSLLEACMLAGNEAFKNVLVIHSLSKRSSAP 236 (376)
T ss_dssp EECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCTTEEEEEESTTTTTCG
T ss_pred EEcCCCCCcCCCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccCCC-CCCHHHccccccccccCcEEEEecchhccCCc
Confidence 9999999999999999999999999999 999999999999988762 333333211 358899999999999999
Q ss_pred chhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 308 GWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 308 G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
|+|+||+++++++++.+........++++++.|.++.++|+. .+++++.++.++++++.+.+.|+ |+. .|.
T Consensus 237 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~ 307 (376)
T 3ezs_A 237 GLRSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLD----DRHAEFFRNIYANNLKLARKIFK---NTL--IYP 307 (376)
T ss_dssp GGCCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC----SHHHHHHHHHHHHHHHHHHHHST---TCC--CCS
T ss_pred cceeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC----cHHHHHHHHHHHHHHHHHHHHhc---CCC--CCC
Confidence 999999999999999999888777888999999999999985 57789999999999999999997 554 678
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----CCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----DDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+++|+|++++ +..+++++|++++||.+.||..|+ .++++||+++.+++++++++++|+++++
T Consensus 308 ~~~~~~~~~~--------------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 308 YSFYVYLPVQ--------------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp BSSEEEEECS--------------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred cceEEEEECC--------------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 8999999986 467899999885699999999987 3579999999899999999999999986
Q ss_pred hh
Q 012095 464 TL 465 (471)
Q Consensus 464 ~~ 465 (471)
+.
T Consensus 374 ~~ 375 (376)
T 3ezs_A 374 NH 375 (376)
T ss_dssp C-
T ss_pred hc
Confidence 53
No 26
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=1.7e-51 Score=418.12 Aligned_cols=391 Identities=24% Similarity=0.386 Sum_probs=320.9
Q ss_pred ccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC----CCCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHH
Q 012095 64 VDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP----DFDTPVLIAEAGINAIREG-FTRYTPNAGTLELR 138 (471)
Q Consensus 64 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~----~~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr 138 (471)
|++.+|..... .++++..+...+... ..++++|+|+.|+| .+++|+.+.+++.+++... ..+|++..|..++|
T Consensus 4 ~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr 81 (416)
T 1bw0_A 4 WDVSMSNHAGL-VFNPIRTVSDNAKPS-PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAR 81 (416)
T ss_dssp CCCCCCHHHHT-CCCHHHHHHHTCCCC-CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHH
T ss_pred cccCchhhhhc-cccHHHHHHHHHHHh-hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHH
Confidence 88877764433 344455544332211 12357899999997 5677899999999988764 46798888999999
Q ss_pred HHHHHHHHH------HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC
Q 012095 139 SAICHKLKE------ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE 212 (471)
Q Consensus 139 ~~ia~~~~~------~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~ 212 (471)
+++++++.+ .+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++.++
T Consensus 82 ~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 161 (416)
T 1bw0_A 82 EAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPEN 161 (416)
T ss_dssp HHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGG
T ss_pred HHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCccc
Confidence 999999983 25666788999999999999999999999999999999999999999999999999999987655
Q ss_pred CCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC----CccccccCC
Q 012095 213 NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA----THTSFASLP 288 (471)
Q Consensus 213 ~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~----~~~~~~~~~ 288 (471)
+|.+|+++|+++++++++++++++|+||||.+++.+++++|+++|++| +++||+||+|.++.+++. ...++..+.
T Consensus 162 ~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~ 240 (416)
T 1bw0_A 162 DWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEEL-RLPLFSDEIYAGMVFKGKDPNATFTSVADFE 240 (416)
T ss_dssp TTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCCSSCTTCCCCCTTSSC
T ss_pred CCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCCCCccCHHHcc
Confidence 688999999999988889999999999999999999999999999999 999999999999888765 334454444
Q ss_pred CCCCceEEEecCCcccCccchhheeeEcCHH--HHHHHH----HHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAACN----KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~--~i~~l~----~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. .+++++++||||.|+++|+|+||++++++ +++.+. ... ...++++++.|.++.++|+.. ...++++.++
T Consensus 241 ~-~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~ 316 (416)
T 1bw0_A 241 T-TVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-MLVCGPCTVVQAALGEALLNT--PQEHLDQIVA 316 (416)
T ss_dssp C-SCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-HHHTCSCHHHHHHHHHHHHSS--CHHHHHHHHH
T ss_pred C-CCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-ccccCCCcHHHHHHHHHHhcc--cHHHHHHHHH
Confidence 3 45789999999999999999999998763 444333 322 134568999999999999842 2678999999
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012095 363 AFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 442 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi 442 (471)
+++++++++.+.|++++|+.+..|.+++|+|++++... .....+..+++++|++++||.+.||..|+.++++||
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRi 390 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEK------YRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRL 390 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGG------BSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHH------cCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEE
Confidence 99999999999999988998888888999999886310 000025778999887666999999999988899999
Q ss_pred EeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 443 SYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 443 s~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+++.+++++++++++|.+++++.+.
T Consensus 391 s~~~~~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 391 TTTRPVEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp ECCSCHHHHHHHHHHHHHHHHHHBC
T ss_pred EecCCHHHHHHHHHHHHHHHHHhhc
Confidence 9988999999999999999987653
No 27
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.1e-51 Score=413.66 Aligned_cols=352 Identities=22% Similarity=0.356 Sum_probs=316.8
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
..|+++|+|+.|++++++|+.+.+++.+++.++..+|++ .| .++|+++++++.+.+|.++++++|++|+|+++++..+
T Consensus 20 ~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~ 97 (377)
T 3fdb_A 20 RYGQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA 97 (377)
T ss_dssp SSCTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred ccCCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHH
Confidence 358899999999999999999999999999877788987 77 8999999999999999888899999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+++++++||+|+++.|+|.++...++..|++++.+|++.+ +|+++++++++++++++++++||||||.+++.++++
T Consensus 98 ~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 173 (377)
T 3fdb_A 98 IDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLN 173 (377)
T ss_dssp HHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred HHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999998753 899999999998899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCC-CCccccccCCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHh
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQS 329 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~ 329 (471)
+|+++|++| ++++|+||+|.++.+++ ....++..+.. .++++++.||||.+|++|+|+||+++ ++++++.+.....
T Consensus 174 ~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 251 (377)
T 3fdb_A 174 ELCDLAHRY-DARVLVDEIHAPLVFDGQHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSP 251 (377)
T ss_dssp HHHHHHHHT-TCEEEEECTTGGGBSSSCCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCH
T ss_pred HHHHHHHHc-CCEEEEEcccchhhcCCCCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHH
Confidence 999999999 99999999999998876 55555555433 57889999999999999999999886 7899999888766
Q ss_pred cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 330 QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 330 ~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
..++++++++|.++.++|.. ..++++++++.++++++++.+.|++ +||+.+..|++++++|++++...
T Consensus 252 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 320 (377)
T 3fdb_A 252 VIKDGASTLGLIAAEAAYRY---GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTT-------- 320 (377)
T ss_dssp HHHCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSC--------
T ss_pred hhcCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccC--------
Confidence 66778999999999999986 4788999999999999999999998 78999999999999999997531
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
...++++.|++++||.+.||+.|+. ++++|++++.+++++++++++|+++++++
T Consensus 321 ---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 321 ---IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp ---CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred ---CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 2256788888877999999999985 68999999999999999999999998764
No 28
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.3e-51 Score=415.57 Aligned_cols=357 Identities=23% Similarity=0.338 Sum_probs=319.4
Q ss_pred CeEEcCCCCCC-CCChHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHHHHHH
Q 012095 96 SVIRLAAGEPD-FDTPVLIAEAGINAIREG-FTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSILQAV 172 (471)
Q Consensus 96 ~~i~l~~g~~~-~~~p~~v~~a~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al~~~~ 172 (471)
.+|+|+.|++. +++|+.+++++.+++.+. ...|++..|..++++++++++.+.+|.++++ ++|++|+|+++++..++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 119 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAV 119 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH
Confidence 38999999876 778899999999988753 3468888999999999999999999987767 79999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC----CCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI----SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~----~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
++++++||+|+++.|+|.++...++..|++++.++++. ++++.+|+++|++++++++++|++++||||||.+++.+
T Consensus 120 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 199 (407)
T 3nra_A 120 AATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAE 199 (407)
T ss_dssp HTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCcccCHH
Confidence 99999999999999999999999999999999999843 35678999999999988999999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC-CCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP-GMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 327 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~ 327 (471)
++++|+++|++| +++||+||+|..+.+++....++..+. ...++++++.||||.+|++|+|+||+++++++++.+...
T Consensus 200 ~l~~i~~~~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~ 278 (407)
T 3nra_A 200 EIGQIAALAARY-GATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKL 278 (407)
T ss_dssp HHHHHHHHHHHH-TCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHH
Confidence 999999999999 999999999999998876666666654 456899999999999999999999999999999999988
Q ss_pred HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCC
Q 012095 328 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 407 (471)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~ 407 (471)
...+.++++++.|.++.++|.. ..+++++.+++++++++.+.+.|++++|+.+..|.+++|+|++++...
T Consensus 279 ~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------- 348 (407)
T 3nra_A 279 QAIVSLRAAGYSQAVLRGWFDE---APGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLA------- 348 (407)
T ss_dssp HHHHTSSSCHHHHGGGGGTTCC---CTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBS-------
T ss_pred HhhhccCCChHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCC-------
Confidence 8888888899999888888875 357888999999999999999999998999988999999999987521
Q ss_pred CCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 408 GKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 408 ~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+..++.+.|++++||.+.||..|+. ++++|++++.++++|++++++|++++++++
T Consensus 349 ---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 349 ---VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp ---SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred ---CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 26788999988777999999998873 589999999999999999999999998765
No 29
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-52 Score=430.91 Aligned_cols=393 Identities=20% Similarity=0.349 Sum_probs=306.3
Q ss_pred ccccccccCCChHHHHHHHHHHHHh---cCC-----CeEEcCCCCCC---CCC----------------------hHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQ---AGV-----SVIRLAAGEPD---FDT----------------------PVLIA 114 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~---~g~-----~~i~l~~g~~~---~~~----------------------p~~v~ 114 (471)
+++++.++.......+...+.++++ +|. ++|++++|+|. ..+ |..++
T Consensus 28 ~~~~~~~~~y~~rg~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~ 107 (498)
T 3ihj_A 28 MNPQVKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAK 107 (498)
T ss_dssp ETTEEEEEEEEECCHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHH
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHH
Confidence 4444544443222234455555554 355 89999999973 222 55555
Q ss_pred HHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCCCCcEEEeCChHHHHHHHHHHhcCCCC----eEEEc
Q 012095 115 EAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEEN-GLSYTPDQILVSNGAKQSILQAVLAVCSPGD----EVIIP 185 (471)
Q Consensus 115 ~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~-g~~~~~~~i~it~G~~~al~~~~~~l~~~gd----~Vlv~ 185 (471)
+++.+++.+ ....|++..|..++|+++++++.+++ |+++++++|++|+|+++++..++.+++++|| .|+++
T Consensus 108 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~ 187 (498)
T 3ihj_A 108 KRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP 187 (498)
T ss_dssp HHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEE
T ss_pred HHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEe
Confidence 666766664 24679999999999999999999888 4888999999999999999999999999875 99999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
.|+|+.|...++..|++++.++++++++|.+|+++|++++++ ++++|+++|||||||.+++.+++++|+++|++|
T Consensus 188 ~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~ 267 (498)
T 3ihj_A 188 IPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE 267 (498)
T ss_dssp ESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 999999999999999999999999888899999999999976 589999999999999999999999999999999
Q ss_pred CCeEEEEccCCCccccCCC-CccccccCCC-------CCCceEEEecCCccc-CccchhheeeE---cCHHHHHHHHHHH
Q 012095 261 PRLLVLSDEIYEHIIYAPA-THTSFASLPG-------MWERTLTVNGFSKAF-AMTGWRLGYIA---GPKHFVAACNKIQ 328 (471)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~-~~~~~~~~~~-------~~~~~i~~~S~SK~~-g~~G~R~G~v~---~~~~~i~~l~~~~ 328 (471)
+++||+||+|.++.|++. ...++..+.. ...++|+++||||.| |++|+|+||++ +++++++.+.+..
T Consensus 268 -~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~ 346 (498)
T 3ihj_A 268 -KLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLL 346 (498)
T ss_dssp -TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHH
T ss_pred -CcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHH
Confidence 999999999999999754 4455544311 124589999999999 89999999998 6999999998876
Q ss_pred hcccCCCChHHHHHHHHHHhccC----CChHH---HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 329 SQFTSGASSISQKAGVAALGLGY----AGGEV---VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 329 ~~~~~~~~~~~q~aa~~~L~~~~----~~~~~---~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
. ...+++.++|.++..++.... ....| ..++++.++++++++.+.|+++||+++.+|+++||+|++++....
T Consensus 347 ~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~ 425 (498)
T 3ihj_A 347 S-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAK 425 (498)
T ss_dssp H-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHH
T ss_pred h-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchh
Confidence 5 566789999998888886310 01233 467788999999999999999999999999999999987642100
Q ss_pred C----cccCCCCCCCHHHH-HHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 402 S----EAEGFGKIENSESL-CRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 402 ~----~~~~~~~~~~~~~l-~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
. ...+ .+..++ +..+++++||.++||+.|+. +++||++++.+++++++++++|+++++++.
T Consensus 426 ~~~~~~~~g----~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~ 494 (498)
T 3ihj_A 426 AVEAAQAHQ----MAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFL 494 (498)
T ss_dssp HHHHHHHTT----SCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHhcC----CCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 134444 67777777999999999984 359999998899999999999999988764
No 30
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=7.6e-51 Score=408.27 Aligned_cols=353 Identities=23% Similarity=0.387 Sum_probs=315.7
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
++++|+|+.|++++++|+.+.+++.+++.++..+|++. ..++++++++++.+.+|.++++++|++|+|+++++..+++
T Consensus 23 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 100 (383)
T 3kax_A 23 NEELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQ 100 (383)
T ss_dssp SSCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHH
Confidence 56899999999999999999999999998777788665 6899999999999999988889999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~-~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++++||+|+++.|+|.++...++..|++++.++++.++ +|.+|+++|++++++++++|++++|+||||.+++.+++++
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~ 180 (383)
T 3kax_A 101 AFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELTK 180 (383)
T ss_dssp HHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHHH
T ss_pred HhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 999999999999999999999999999999999987543 4779999999999889999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ 330 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~ 330 (471)
|+++|++| +++||+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||+++ ++++++.+......
T Consensus 181 l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 259 (383)
T 3kax_A 181 LGSLCTKY-NVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYR 259 (383)
T ss_dssp HHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHC-CCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhh
Confidence 99999999 99999999999998877655566655422 37899999999999999999999998 68899998887655
Q ss_pred cc-CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 331 FT-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 331 ~~-~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
+. +++++++|.++.++|.. ..+++++.+++++++++++.+.|++ ++|+.+..|++++++|++++.. +
T Consensus 260 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 328 (383)
T 3kax_A 260 QGFHGLNIFAYTAMQSAYTE---CNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSAL-N------- 328 (383)
T ss_dssp TTCCCCCHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEcccc-C-------
Confidence 43 37899999999999886 4788999999999999999999998 7899999999999999998752 0
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.+..+++++|++++||.+.||..|+. ++++|++++.+++++++++++|++++
T Consensus 329 --~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 329 --LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp --CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 26889999998777999999998876 48999999999999999999999876
No 31
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-50 Score=408.33 Aligned_cols=358 Identities=19% Similarity=0.297 Sum_probs=319.7
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.|+++|+|+.|++++++|+.+.+++.+++.++..+|++. ..++++++++++.+.+|.++++++|++|+|+++++..++
T Consensus 25 ~g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~ 102 (391)
T 3dzz_A 25 LKEKELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMV 102 (391)
T ss_dssp CCTTCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHH
T ss_pred cCCCceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHH
Confidence 467899999999999999999999999988777788665 699999999999999998888999999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC-CCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLL 250 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l 250 (471)
++++++||+|+++.|+|.++...++..|++++.+|++ .+++|.+|+++|+++++ +++++|++++|+||||.+++.+++
T Consensus 103 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l 182 (391)
T 3dzz_A 103 RQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEV 182 (391)
T ss_dssp HHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHH
T ss_pred HHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHH
Confidence 9999999999999999999999999999999999986 34567799999999997 789999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHH
Q 012095 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQ 328 (471)
Q Consensus 251 ~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~ 328 (471)
++|+++|++| |++||+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||++++ +++++.+....
T Consensus 183 ~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~ 261 (391)
T 3dzz_A 183 KRIAELCAKH-QVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESF 261 (391)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHH
Confidence 9999999999 99999999999998877656666665432 478999999999999999999999997 89999988775
Q ss_pred hc-ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccC
Q 012095 329 SQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 329 ~~-~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~ 406 (471)
.. ..++++++.+.++.++|.. ..+++++.++.++++++++.+.|++ ++|+.+..|.+++++|++++...
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------ 332 (391)
T 3dzz_A 262 FLAGIGEPNLLAIPAAIAAYEE---GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALG------ 332 (391)
T ss_dssp HHHTCSSCCTTHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGC------
T ss_pred HhhccCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcC------
Confidence 43 3457899999999999986 4788999999999999999999998 88999999999999999987520
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCC--CcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~--~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+..++.++|++++||.+.||..|+.. +++|++++.+++++++++++|.+++++++
T Consensus 333 ----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 333 ----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp ----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 268899999975569999999998864 79999999999999999999999998764
No 32
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.1e-50 Score=410.77 Aligned_cols=386 Identities=22% Similarity=0.366 Sum_probs=330.5
Q ss_pred ccccccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHH
Q 012095 62 VQVDVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLE 136 (471)
Q Consensus 62 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~ 136 (471)
|+|...+++++..+.++.+..+...+..+..+|+++|+|+.|.|+.. +++.+.+++.+++.+. .. |++..|..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~ 79 (407)
T 2zc0_A 1 MDYTKYLAGRANWIKGSALADVMKKASELQKKGVKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPE 79 (407)
T ss_dssp CCGGGGSCGGGGGCCCCHHHHHHHHHHHHHHSSCCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHH
T ss_pred CcchhhhhhhhccCCchHHHHHHHhhhcccCCCCceEeCCCCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHH
Confidence 34444578888888888887777666544456778999999987654 5788999999888753 35 988889999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcC
Q 012095 137 LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (471)
Q Consensus 137 lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~l 216 (471)
+|+++++++.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|++.+ ++
T Consensus 80 l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~ 156 (407)
T 2zc0_A 80 LREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---GM 156 (407)
T ss_dssp HHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EE
T ss_pred HHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---CC
Confidence 999999999888897778899999999999999999999999999999999999999999999999999998643 38
Q ss_pred CHHHHHhhhc----c--CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 217 DPKVLESKLT----E--KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 217 d~e~l~~~l~----~--~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
|+++|+++++ + ++++|+ +++|+||||.+++.+++++|+++|++| +++||+||+|..+.+++....++..++.
T Consensus 157 d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~ 235 (407)
T 2zc0_A 157 RVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKY-DLLIIEDTAYNFMRYEGGDIVPLKALDN 235 (407)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBSSCSSCCCGGGGCS
T ss_pred CHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECCCcccccCCCCCCChhhcCC
Confidence 9999999987 5 788875 789999999999999999999999999 9999999999998887654455555543
Q ss_pred CCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCCh-HHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERR 368 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~-~~~~~~~~~~~~~r 368 (471)
.+++++++||||.++ +|+|+||+++++++++.+......++++++++.|.++.++|+.... . .++++.++.+++++
T Consensus 236 -~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 312 (407)
T 2zc0_A 236 -EGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYF-EKYHLEGALLGYKEKR 312 (407)
T ss_dssp -SCCEEEEEESTTTTC-TTSCCEEEECCHHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHH-HHHTTTTHHHHHHHHH
T ss_pred -CCCEEEEcccccccC-CCcceEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHH
Confidence 468999999999999 9999999999999999999887777778899999999999986311 3 56788899999999
Q ss_pred HHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEE
Q 012095 369 DFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRIS 443 (471)
Q Consensus 369 ~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis 443 (471)
+++.+.|++ ++|+.+..|.+++|+|++++.. .+..++.+.|++++||.+.||..|+. ++++|++
T Consensus 313 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis 381 (407)
T 2zc0_A 313 DIMLKALENHLPNAEFTKPIAGMFVMFFLPEG-----------ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLN 381 (407)
T ss_dssp HHHHHHHHHHCTTSCBCCCSBSSEEEEECSTT-----------CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEE
T ss_pred HHHHHHHHHhCCCCEEecCCCcEEEEEEcCCC-----------CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEE
Confidence 999999987 5788887788999999999753 26788999998877999999998863 5799999
Q ss_pred eec-CHHHHHHHHHHHHHHHHhhC
Q 012095 444 YAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 444 ~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
++. +++++++++++|+++++++.
T Consensus 382 ~~~~~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 382 FSRPSKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp CSSSCTTHHHHHHHHHHHHHHHHC
T ss_pred eCCCCHHHHHHHHHHHHHHHHHHh
Confidence 998 78999999999999998764
No 33
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=2.7e-50 Score=405.31 Aligned_cols=352 Identities=24% Similarity=0.407 Sum_probs=314.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.++|+|+.|++++++|+.+.+++.+++.+....|++ +..++++++++++.+.+|.++++++|++|+|+++++..+++
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 31 TNDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLIN 108 (391)
T ss_dssp CSCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHH
Confidence 5689999999999999999999999998776677755 67999999999999999988889999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC--CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~--~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+++++||+|+++.|+|.++...++..|++++.+|++ .+++|.+|++++++++++ +++|++++|+||||.+++.++++
T Consensus 109 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~ 187 (391)
T 4dq6_A 109 ELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELK 187 (391)
T ss_dssp HHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHH
T ss_pred HhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHH
Confidence 999999999999999999999999999999999997 456688999999999988 99999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEcCH-HHHHHHHHHHh
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQS 329 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l~~~~~ 329 (471)
+|+++|++| ++++|+||+|.++.+++....++..+..+ .++++++.||||.+|++|+|+||+++++ ++++.+.....
T Consensus 188 ~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 266 (391)
T 4dq6_A 188 KLGDICLKH-NVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFT 266 (391)
T ss_dssp HHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHH
Confidence 999999999 99999999999998887655566555421 4788999999999999999999999875 89998887754
Q ss_pred cc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCC
Q 012095 330 QF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGF 407 (471)
Q Consensus 330 ~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~ 407 (471)
.+ .++++.++|.++.++|.. .++++++.++.++++++++.+.|++ +||+.+..+++++++|++++.. +
T Consensus 267 ~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 336 (391)
T 4dq6_A 267 RIDIKRNNCFSLVATEASYNN---GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSAL-G------ 336 (391)
T ss_dssp HTTCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGG-C------
T ss_pred hhcCCCCCHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhc-C------
Confidence 44 447899999999999986 4788999999999999999999988 7899999999999999999752 0
Q ss_pred CCCCCHHHHHHHHHHcCCEEEECCCCCCCC--CcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 408 GKIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 408 ~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~--~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.+..++.++|++++||.+.||..|+.. +++|++++.+++++++++++|++++
T Consensus 337 ---~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 337 ---LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp ---CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 268899999988779999999998754 8999999999999999999999876
No 34
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.5e-50 Score=420.74 Aligned_cols=355 Identities=20% Similarity=0.291 Sum_probs=294.9
Q ss_pred hHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-CCCCeEEE
Q 012095 110 PVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-SPGDEVII 184 (471)
Q Consensus 110 p~~v~~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-~~gd~Vlv 184 (471)
|..+++++.+++.. ....|++..|..++|+++++++.+.+|.++++++|++|+|+++++..++.+++ ++||+|++
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv 187 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILV 187 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEE
Confidence 45566666666665 35789999999999999999999999988899999999999999999999998 89999999
Q ss_pred cCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHHHH
Q 012095 185 PAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARIVA 258 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~ 258 (471)
++|+|+.|...++..|++++.++++.+++|.+|+++|++++++ ++++|++++||||||.++|.+++++|+++|+
T Consensus 188 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~ 267 (500)
T 3tcm_A 188 PIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCK 267 (500)
T ss_dssp EESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred eCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999887899999999999976 7899999999999999999999999999999
Q ss_pred hCCCeEEEEccCCCccccCCC-Ccccccc----CC--CCCCceEEEecCCccc-CccchhheeeEc---CHHHHHHHHHH
Q 012095 259 KHPRLLVLSDEIYEHIIYAPA-THTSFAS----LP--GMWERTLTVNGFSKAF-AMTGWRLGYIAG---PKHFVAACNKI 327 (471)
Q Consensus 259 ~~~~~~ii~De~y~~~~~~~~-~~~~~~~----~~--~~~~~~i~~~S~SK~~-g~~G~R~G~v~~---~~~~i~~l~~~ 327 (471)
+| +++||+||+|.++.|++. ...++.. +. ....++++++||||.| |++|+|+||+++ ++++++.+.+.
T Consensus 268 ~~-~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~ 346 (500)
T 3tcm_A 268 NE-GLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI 346 (500)
T ss_dssp HH-TCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH
T ss_pred Hc-CCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH
Confidence 99 999999999999998643 3444432 21 1234689999999999 899999999998 89999999887
Q ss_pred HhcccCCCChHHHHHHHHHHhccCC-------ChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc
Q 012095 328 QSQFTSGASSISQKAGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY 400 (471)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~L~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~ 400 (471)
.. ...+++.++|.++..+|..... ...++.++++.++++++++.+.|++++|+++.+|+++||+|+++....
T Consensus 347 ~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~lp~ 425 (500)
T 3tcm_A 347 AS-VNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCNEAEGAMYVFPQICLPQ 425 (500)
T ss_dssp HH-TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBTTEECCEECCCH
T ss_pred Hh-cccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEecCCeEEEEeeeecCch
Confidence 64 5678999999999999874210 135577888999999999999999999999999999999997654210
Q ss_pred CC-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 401 GS-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 401 ~~-~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. ......+..+...++..+++++||+++||+.|+. .++||++++.+++++++++++|+++++++.
T Consensus 426 ~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~ 495 (500)
T 3tcm_A 426 KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFM 495 (500)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 00 0000000012344566777778999999999984 358999999988999999999999988754
No 35
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.2e-50 Score=414.55 Aligned_cols=372 Identities=18% Similarity=0.202 Sum_probs=324.7
Q ss_pred ccCCChHHHHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHHhCC
Q 012095 74 AVKPSKTVAITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTPNAGTLELRSAICHKLKEENGL 151 (471)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~-~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~g~ 151 (471)
.+.+++++.+......+. ..|+++|+|+.|++++++|+.+.+++.+++.++. .+|++..|..++|+++++++++.+|+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~ 101 (437)
T 3g0t_A 22 DLGMASIRDLVALVTNLEKATGTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNI 101 (437)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHTCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCC
T ss_pred cCCCcHHHHHHHHHHHHHHhcCCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCC
Confidence 444566767766665544 3588999999999999999999999999988666 88988889999999999999999999
Q ss_pred CCCCCcEEEeCChHHHHHHHHHHhc--CCCC--eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh-c
Q 012095 152 SYTPDQILVSNGAKQSILQAVLAVC--SPGD--EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-T 226 (471)
Q Consensus 152 ~~~~~~i~it~G~~~al~~~~~~l~--~~gd--~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l-~ 226 (471)
++++++|++|+|+++++..++++++ ++|| +|+++.|+|.++...++..|++++.++++ +++|.+|+++|++++ +
T Consensus 102 ~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~ 180 (437)
T 3g0t_A 102 DIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT 180 (437)
T ss_dssp CCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT
T ss_pred CCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc
Confidence 8899999999999999999999999 9999 99999999999999999999999999997 467889999999999 7
Q ss_pred cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc----cc-ccCCCCCCceEEEecCC
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT----SF-ASLPGMWERTLTVNGFS 301 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~----~~-~~~~~~~~~~i~~~S~S 301 (471)
+++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++.... ++ ..+....++++++.|||
T Consensus 181 ~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 259 (437)
T 3g0t_A 181 GQFCSIIYSNPNNPTWQCMTDEELRIIGELATKH-DVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS 259 (437)
T ss_dssp TCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred CCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHC-CcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence 7899999999999999999999999999999999 999999999999888632111 11 34433368899999999
Q ss_pred cccCccchhheeeEcCHHHHH-H-----------------HHHHHhcccCCCChHHHHHHHHHHhccCCChHH---HHHH
Q 012095 302 KAFAMTGWRLGYIAGPKHFVA-A-----------------CNKIQSQFTSGASSISQKAGVAALGLGYAGGEV---VSKM 360 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~-~-----------------l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~---~~~~ 360 (471)
|.+|++|+|+||+++++++++ . +........++++.++|.++.++|+.. ..| +++.
T Consensus 260 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~ 336 (437)
T 3g0t_A 260 KAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC---NDGEYNFRDS 336 (437)
T ss_dssp TTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH---HTTSCCHHHH
T ss_pred cCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc---HhHHHHHHHH
Confidence 999999999999999999999 7 777666667789999999999999862 223 8899
Q ss_pred HHHHHHHHHHHHHHhcCCCCCeee-------CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 361 VKAFRERRDFLVKSFGELEGVKMS-------EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 361 ~~~~~~~r~~l~~~L~~~~g~~~~-------~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
+++++++++++.+.|+++ |+.+. ++.+++|+|++++.. +..++.+.|+++ ||.+.||..
T Consensus 337 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~-gi~v~~~~~ 402 (437)
T 3g0t_A 337 VIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGM------------DSSKLIEKFVRY-GMCAITLKT 402 (437)
T ss_dssp HHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTC------------CHHHHHHHHHHT-TEECEESTT
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCC------------CHHHHHHHHHHc-CeEEeeccc
Confidence 999999999999999999 88887 448899999999732 788999998876 999999998
Q ss_pred CCCC--CcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 434 FGDD--TCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 434 f~~~--~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
|+.. +++|++++. +++++++++++|++++++
T Consensus 403 ~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 403 TGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp TTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 8754 789999998 889999999999998764
No 36
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=2e-50 Score=407.85 Aligned_cols=357 Identities=24% Similarity=0.344 Sum_probs=313.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
+++|+|+.|++++++|+.+.+++.+++.....+|++. ..++|+++++++.+.+|+++++++|++|+|+++++..++++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~ 108 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVRE 108 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHH
Confidence 3799999999998889999999999887666788653 89999999999998889877889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++++||+|++++|+|+++...++..|++++.+|++.+ ++|.+|+++|+++++ +++++|++++||||||.++|.+++++
T Consensus 109 l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (399)
T 1c7n_A 109 FTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQK 188 (399)
T ss_dssp HCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHH
T ss_pred hcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHH
Confidence 9999999999999999999999999999999998633 357799999999997 68899999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQ 330 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~ 330 (471)
|+++|++| +++||+||+|.++.+++....++..+... .++++++.||||.+|++|+|+||++++ +++++.+......
T Consensus 189 i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~ 267 (399)
T 1c7n_A 189 IKDIVLKS-DLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDA 267 (399)
T ss_dssp HHHHHHHS-SCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhh
Confidence 99999999 99999999999998876544455554321 368899999999999999999999997 6799999887766
Q ss_pred ccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 331 FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 331 ~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
+++ ++++++|.++.++|+. ..+++++.++.++++++++.+.|++ +||+.+..+.++|++|++++.. +
T Consensus 268 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 336 (399)
T 1c7n_A 268 TSGMPFTTLGYKACEICYKE---CGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRAL-K------- 336 (399)
T ss_dssp TTCCCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccC-C-------
Confidence 644 6799999999999986 3688999999999999999999998 8899988899999999998742 0
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+..++++.|++++||.+.||..|+ .++++||+++.+++++++++++|.+++++++.
T Consensus 337 --~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 337 --MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp --CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred --CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHh
Confidence 1678899998866799999999887 46899999999889999999999999988763
No 37
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=9.2e-51 Score=412.49 Aligned_cols=374 Identities=16% Similarity=0.217 Sum_probs=310.8
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhc--CCCeEEcCCCCC-----CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQA--GVSVIRLAAGEP-----DFDTPVLIAEAGINAIREGFTRYTPNAGTLELR 138 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~l~~g~~-----~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr 138 (471)
+.++.+.....++++..+...+.+.... |+++|+|+.|++ ++++|+.+.+++.+....+..+|++..|..++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr 85 (413)
T 3t18_A 6 MTIKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYR 85 (413)
T ss_dssp SSCTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHH
T ss_pred hhhhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 4457888888899998888887776655 678999999997 777888898888764333456898889999999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 139 SAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 139 ~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
+++++++...++.. ++++|++|+|+++++..++++++++||+|++++|+|..|...++..|++++.+|+..++ |.+|+
T Consensus 86 ~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~ 163 (413)
T 3t18_A 86 KIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNI 163 (413)
T ss_dssp HHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCH
T ss_pred HHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCH
Confidence 99999997766533 45599999999999999999999999999999999999999999999999999986444 78999
Q ss_pred HHHHhhhcc----CCc-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCeEEEEccCCCccccCCCCcccccc
Q 012095 219 KVLESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 219 e~l~~~l~~----~~~-~i~i~~p-~NPtG~~~~~~~l~~i~~l~~------~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
++|++++++ +++ ++++++| |||||.+++.+++++|+++|+ +| +++||+||+|.++.+++....++..
T Consensus 164 ~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~ 242 (413)
T 3t18_A 164 DVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDK-KITLIVDVAYLEFAGDGDQQRKFFE 242 (413)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTC-EEEEEEECTTGGGSSSSSTTTGGGG
T ss_pred HHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCC-cEEEEEecccccccCChhhHHHHHH
Confidence 999999875 677 6778999 999999999999999999999 89 9999999999999887654444433
Q ss_pred -CCCCCCc--eEEEecCCcccCccchhheeeEc---CHHHHHHHHHHHhcc----cCCCChHHHHHHHHHHhccCC--Ch
Q 012095 287 -LPGMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSISQKAGVAALGLGYA--GG 354 (471)
Q Consensus 287 -~~~~~~~--~i~~~S~SK~~g~~G~R~G~v~~---~~~~i~~l~~~~~~~----~~~~~~~~q~aa~~~L~~~~~--~~ 354 (471)
.+...++ +++++||||.+|++|+|+||+++ ++++++.+....... ..+++.++|.++..+|++... ..
T Consensus 243 ~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 322 (413)
T 3t18_A 243 KFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYE 322 (413)
T ss_dssp GGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHH
T ss_pred HHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHH
Confidence 2322344 58899999999999999999998 999999988765432 245889999998888865210 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
++++++++.++++++++.+.|+++ |+++..|+++||+|+++. +..++++.|.+ +||.+.||
T Consensus 323 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~-~gv~v~~g--- 383 (413)
T 3t18_A 323 QELVDLRNMLKSRADVFVTAAKEN-KLTMIPYFGGFFTFIPTD--------------KAFDIVKDLEK-ENIFTIPS--- 383 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSSSCEEEECS--------------CHHHHHHHHHH-TTEECEEC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCCccCCCceEEEEeCCC--------------CHHHHHHHHHh-CCEEEecC---
Confidence 456678889999999999999988 899999999999998763 67788887754 59999998
Q ss_pred CCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012095 435 GDDTCIRISYAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 435 ~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
++++||+++. +++++ +++|.+++++++
T Consensus 384 --~~~iRis~~~~~~~~~---l~~l~~~l~~~~ 411 (413)
T 3t18_A 384 --AKGIRVAICGVGEEKI---PKLVQRLAFYTN 411 (413)
T ss_dssp --SSEEEECTTTSCGGGH---HHHHHHHHHHHH
T ss_pred --CCceEEEEeeCCHHHH---HHHHHHHHHHHh
Confidence 4789999997 66666 888888888764
No 38
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=5.6e-50 Score=403.50 Aligned_cols=353 Identities=18% Similarity=0.303 Sum_probs=307.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHH-HHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLE-LRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~-lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
++|+|+.|++++++|+.+.+++.+++.....+|++. ..+ +|+++++++++.+|+++++++|++|+|+++++..++++
T Consensus 29 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~ 106 (390)
T 1d2f_A 29 DLLPFTISDMDFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQ 106 (390)
T ss_dssp -CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHH
T ss_pred CeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHH
Confidence 689999999999889999999999887666788654 678 99999999999889878889999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCC-CCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISE-NFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~-~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++++||+|+++.|+|+++...++..|++++.+|++.++ +|.+|+++|++++++ ++++|++++|+||||.+++.+++++
T Consensus 107 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~ 186 (390)
T 1d2f_A 107 WSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186 (390)
T ss_dssp SSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHH
T ss_pred hcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHH
Confidence 99999999999999999999999999999999987653 577999999999975 7899999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHh-c
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS-Q 330 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~-~ 330 (471)
|+++|++| +++||+||+|.++.+++....++..+.... ... +.||||.+|++|+|+||++++ +++++.+..... .
T Consensus 187 l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~-~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 263 (390)
T 1d2f_A 187 MADLCERH-GVRVISDEIHMDMVWGEQPHIPWSNVARGD-WAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGR 263 (390)
T ss_dssp HHHHHHHT-TCEEEEECTTTTCBCSSSCCCCGGGTCCSS-EEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTT
T ss_pred HHHHHHHc-CCEEEEEccccccccCCCCCcCHHHcchhh-Hhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhh
Confidence 99999999 999999999999988765555555554322 023 999999999999999999985 789998887765 4
Q ss_pred ccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 331 FTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 331 ~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
..+ +++.+.|.++.++|+. ..+++++.++.++++++++.+.|++ +||+.+..|.+++++|++++.. +
T Consensus 264 ~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~------- 332 (390)
T 1d2f_A 264 DGLSSPSVLALTAHIAAYQQ---GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPL-N------- 332 (390)
T ss_dssp SCCCSCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGG-C-------
T ss_pred cccCCCCHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEcccc-C-------
Confidence 443 6899999999999986 4678999999999999999999998 7899888899999999998742 0
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCC--CCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFG--DDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+..++.+.|++++||.+.||..|+ .++++||+++.+++++++++++|++++++++
T Consensus 333 --~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~~ 390 (390)
T 1d2f_A 333 --IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR 390 (390)
T ss_dssp --CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhhC
Confidence 1677899998866799999999886 3579999999998999999999999998753
No 39
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.7e-50 Score=411.20 Aligned_cols=374 Identities=17% Similarity=0.216 Sum_probs=308.2
Q ss_pred cccccccCCChHHHHHHHHHHHHhc--CCCeEEcCCCCC-----CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQA--GVSVIRLAAGEP-----DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAI 141 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~--g~~~i~l~~g~~-----~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~i 141 (471)
..+.....++++..+.+.+.+.... |.++|+|+.|+| ++++|+.+.+++.+....+..+|++..|.++||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~i 89 (418)
T 3rq1_A 10 KHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAA 89 (418)
T ss_dssp TTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHH
T ss_pred hhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHH
Confidence 4455556677777877777766655 668999999987 777888898888765443456899999999999999
Q ss_pred HHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHH
Q 012095 142 CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL 221 (471)
Q Consensus 142 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l 221 (471)
++++...++.. .+++|++|+|+++++..+++++++|||+|++++|+|.+|...++..|++++.+|++.++ |.+|++.+
T Consensus 90 a~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l 167 (418)
T 3rq1_A 90 EKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAF 167 (418)
T ss_dssp HHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHH
T ss_pred HHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHH
Confidence 99997766532 23499999999999999999999999999999999999999999999999999986544 78999999
Q ss_pred Hhhhcc----CCc-EEEEcCC-CCCcccCCCHHHHHHHHHHHH------hCCCeEEEEccCCCccccCCCCcccccc-CC
Q 012095 222 ESKLTE----KSR-LLILCSP-SNPTGSVYPKNLLDEIARIVA------KHPRLLVLSDEIYEHIIYAPATHTSFAS-LP 288 (471)
Q Consensus 222 ~~~l~~----~~~-~i~i~~p-~NPtG~~~~~~~l~~i~~l~~------~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~ 288 (471)
++++++ +++ ++++++| |||||.+++.+++++|+++|+ +| +++||+||+|.++.+++....++.. .+
T Consensus 168 ~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~ 246 (418)
T 3rq1_A 168 QNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRN-NVIIGIDVAYLDYSGEKDEVRAFFNKFS 246 (418)
T ss_dssp HHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSC-EEEEEEECTTGGGSSCHHHHHGGGGGGT
T ss_pred HHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCC-CeEEEEecccccccCChHHHHHHHHHHH
Confidence 999875 666 7778999 999999999999999999999 89 9999999999998876533333332 23
Q ss_pred CCCCc--eEEEecCCcccCccchhheeeEc---CHHHHHHHHHHHhcc----cCCCChHHHHHHHHHHhccCC---ChHH
Q 012095 289 GMWER--TLTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNKIQSQF----TSGASSISQKAGVAALGLGYA---GGEV 356 (471)
Q Consensus 289 ~~~~~--~i~~~S~SK~~g~~G~R~G~v~~---~~~~i~~l~~~~~~~----~~~~~~~~q~aa~~~L~~~~~---~~~~ 356 (471)
...++ +++++||||.+|++|+|+||+++ ++++++.+....... ..+++.++|.++..+|.+... ..++
T Consensus 247 ~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 326 (418)
T 3rq1_A 247 HLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAE 326 (418)
T ss_dssp TCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHH
Confidence 32344 58999999999999999999999 999999988765432 246889999999999975210 0223
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
++++++.++++++++.+.|+++ |+++..|+++||+|++++ +..++++.|. ++||.+.||.
T Consensus 327 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~-~~gi~v~~g~---- 386 (418)
T 3rq1_A 327 RNCYYQLIRDRADIFKQEAAQV-GLPMLPYRGGFFITIPTD--------------SANAICEELK-KEHIYVIALA---- 386 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCCCCCCSSSEEEEECT--------------THHHHHHHHH-HTTEECEECS----
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCceEEEEcCCC--------------CHHHHHHHHH-hCCEEEecCC----
Confidence 4567789999999999999988 899999999999998874 5778888765 4599999984
Q ss_pred CCcEEEEeec-CHHHHHHHHHHHHHHHHhhC
Q 012095 437 DTCIRISYAA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 437 ~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++||+++. +++++++++++|+++++++.
T Consensus 387 -~~iRis~~~~~~~~i~~~~~~l~~~l~~~~ 416 (418)
T 3rq1_A 387 -NGIRIAACGIPKCQMTGLAEKIYNAMKSLG 416 (418)
T ss_dssp -SEEEEEGGGSCHHHHTTHHHHHHHHHHHTT
T ss_pred -CCeEEEEecCCHHHHHHHHHHHHHHHHHHh
Confidence 689999986 99999999999999998765
No 40
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=4.8e-50 Score=409.69 Aligned_cols=375 Identities=24% Similarity=0.395 Sum_probs=315.2
Q ss_pred ccccccccccCC-ChHHHHHHHHHHHH--hcCCCeEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCHHH
Q 012095 66 VSLSPRVNAVKP-SKTVAITDQATALA--QAGVSVIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTLEL 137 (471)
Q Consensus 66 ~~~s~~~~~~~~-~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~~l 137 (471)
..+++++..+++ +.+..+........ ..++++|+|+.|++++++|+.+.+++.+++. .+..+|++..|..+|
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 24 VSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPL 103 (432)
T ss_dssp CCCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHH
T ss_pred cccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHH
Confidence 345667777877 46666554433222 2466899999999999999999999999887 345689888999999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCC------------EEEE
Q 012095 138 RSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA------------TPVI 205 (471)
Q Consensus 138 r~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~------------~~~~ 205 (471)
++++++++.+ +..+++++|++|+|+++++.. +..++++||.|++++|+|+++...++..|. +++.
T Consensus 104 ~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~-l~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 180 (432)
T 3ei9_A 104 RAAIAKTFYG--GLGIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180 (432)
T ss_dssp HHHHHHHHHT--TTTCCGGGEEEESCHHHHHHH-HHHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEE
T ss_pred HHHHHHHHHc--cCCCCcceEEECCChHHHHHH-HHHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEE
Confidence 9999999974 555788999999999999996 577889999999999999999999998884 6788
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++++.++++..|++. .+++++|++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++. ..++.
T Consensus 181 ~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~-~~~li~Dea~~~~~~~~~-~~~~~ 253 (432)
T 3ei9_A 181 MRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKN-GSIIVYDSAYAMYMSDDN-PRSIF 253 (432)
T ss_dssp EECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSSC-CSSGG
T ss_pred eccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEccchHhhccCCC-CCChh
Confidence 888766666666543 35789999999999999999999999999999999 999999999999887753 33455
Q ss_pred cCCCCCCceEEEecCCcccCccchhheeeEcCHHH--------HHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF--------VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVV 357 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~--------i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~ 357 (471)
.+....+++++++||||.||++|+|+||+++++++ ++.+.+.......++++++|.++.+++... ..+|+
T Consensus 254 ~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~ 331 (432)
T 3ei9_A 254 EIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPE--GLEAM 331 (432)
T ss_dssp GSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHH--HHHHH
T ss_pred hcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcc--cHHHH
Confidence 55544678999999999999999999999999888 788877766666778999999999888631 24688
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-
Q 012095 358 SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD- 436 (471)
Q Consensus 358 ~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~- 436 (471)
++++++++++++++.+.|.++ |+++..+.+++|+|++++.. +..++++.|++++||.+.||..|+.
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ll~~~gv~v~~g~~f~~~ 398 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPNQ------------SSWDVFAEILEKTHVVTTPGSGFGPG 398 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTTS------------CHHHHHHHHHHHHCEECEEGGGGCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCCC------------CHHHHHHHHHHHCCEEEeCchHhCCC
Confidence 999999999999999999988 89888888899999999842 6788999999888999999999985
Q ss_pred -CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 437 -DTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 -~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
++++||+++.+++++++++++|++--+..
T Consensus 399 ~~~~iRis~~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 399 GEGFVRVSAFGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp GTTEEEEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEEEecCCHHHHHHHHHHHHHHhhhc
Confidence 58999999889999999999999865543
No 41
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.1e-51 Score=414.27 Aligned_cols=381 Identities=21% Similarity=0.329 Sum_probs=323.4
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHH
Q 012095 65 DVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLELRS 139 (471)
Q Consensus 65 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~ 139 (471)
+..+++++..++++.+..+...+ .++++|+|+.|.|+.. +++.+.+++.+++... ..+|++..|..++|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~ 92 (425)
T 1vp4_A 18 EGKISKIGQNMKSSIIREILKFA-----ADKDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92 (425)
T ss_dssp HHHCCHHHHTCCCCCHHHHTTTT-----TSTTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHH
T ss_pred HhhhhhhhhcCCCcHHHHHHHhc-----cCCCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHH
Confidence 34567777777777665544321 3567999999987654 5788999999888653 368988889999999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 140 AICHKLKEENGLS-YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 140 ~ia~~~~~~~g~~-~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++++++.+.+|.+ +++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.+|++.+ ++|+
T Consensus 93 ~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~ 169 (425)
T 1vp4_A 93 QILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDL 169 (425)
T ss_dssp HHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECH
T ss_pred HHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCH
Confidence 9999998887876 78899999999999999999999999999999999999999999999999999998753 3899
Q ss_pred HHHHhhhcc--------CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC
Q 012095 219 KVLESKLTE--------KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 219 e~l~~~l~~--------~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
++|++++++ ++++|+ +++|+||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..++.
T Consensus 170 ~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~ 248 (425)
T 1vp4_A 170 NVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY-DLFIVEDDPYGALRYEGETVDPIFKIGG 248 (425)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECSSTTCBCSSCCCCCHHHHHC
T ss_pred HHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCCCcCHHHhCC
Confidence 999999875 788885 799999999999999999999999999 9999999999999887654445544432
Q ss_pred CCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRD 369 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~ 369 (471)
.+++++++||||.+| +|+|+||+++++++++.+......+++++++++|.++.++|+... ..++++++++.++++++
T Consensus 249 -~~~~i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~ 325 (425)
T 1vp4_A 249 -PERVVLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYD-LLEQLKPTIELYRRKRT 325 (425)
T ss_dssp -TTTEEEEEESTTTTC-GGGCEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSC-HHHHTHHHHHHHHHHHH
T ss_pred -CCCEEEEeccccccc-cccceEEEeeCHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHH
Confidence 468999999999999 999999999999999999887777777789999999999998632 15788999999999999
Q ss_pred HHHHHhcC-CC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEE
Q 012095 370 FLVKSFGE-LE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIR 441 (471)
Q Consensus 370 ~l~~~L~~-~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iR 441 (471)
++.+.|++ ++ |+.+..|.+++|+|++++... +..++++.|+++ ||.+.||..|+. ++++|
T Consensus 326 ~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iR 393 (425)
T 1vp4_A 326 VMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF-----------DTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMR 393 (425)
T ss_dssp HHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC-----------CTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEE
T ss_pred HHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC-----------CHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEE
Confidence 99999987 35 688888899999999997531 456788988887 999999998863 57999
Q ss_pred EEeec-CHHHHHHHHHHHHHHHHhhCCCC
Q 012095 442 ISYAA-SLTTLQAAVERIKKGLLTLRPGV 469 (471)
Q Consensus 442 is~~~-~~e~i~~~~~~l~~~l~~~~~~~ 469 (471)
|+++. +++++++++++|+++++++..+.
T Consensus 394 is~~~~~~e~i~~~l~~l~~~l~~~~~~~ 422 (425)
T 1vp4_A 394 LSFCLPPDEKIVEGIKRLREVVLEYGKEK 422 (425)
T ss_dssp EECSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 99998 79999999999999998765443
No 42
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=8.1e-50 Score=406.73 Aligned_cols=354 Identities=24% Similarity=0.356 Sum_probs=317.3
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
|+++|+|+.|++++++|+.+.+++.+++......|++. ..++++++++++.+.+|+++++++|++|+|+++++..+++
T Consensus 60 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~ 137 (421)
T 3l8a_A 60 NPELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQ 137 (421)
T ss_dssp CTTCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHH
T ss_pred CCCeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHH
Confidence 77899999999999999999999999988777788654 3899999999999999988889999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC-CCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR-ISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~-~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+++++||+|+++.|+|.++...++..|.+++.+|++ .+++|.+|+++|+++++ +++++|++++|+||||.++++++++
T Consensus 138 ~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~ 217 (421)
T 3l8a_A 138 AFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLI 217 (421)
T ss_dssp HHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred HhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHH
Confidence 999999999999999999999999999999999987 45668899999999998 7899999999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCC-CCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHh
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPG-MWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~ 329 (471)
+|+++|++| +++||+||+|.++.+++....++..+.. ..++++++.|+||.+|++|+|+||++++ +++++.+.....
T Consensus 218 ~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~ 296 (421)
T 3l8a_A 218 KIAELCKKH-GVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQL 296 (421)
T ss_dssp HHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHH
Confidence 999999999 9999999999999988766666666653 2578999999999999999999999998 899999887653
Q ss_pred c-ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCC
Q 012095 330 Q-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG 408 (471)
Q Consensus 330 ~-~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 408 (471)
. ..++++++++.++.++|+. .++|++++++.++++++++.+.|++++++.+..+.++|++|++++.. +
T Consensus 297 ~~~~~~~n~~~~~a~~aal~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~-~------- 365 (421)
T 3l8a_A 297 ANNQHEVPTVGMIATQAAFQY---GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAY-A------- 365 (421)
T ss_dssp HTTCSCCCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGG-T-------
T ss_pred hcccCCCCHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEecccc-C-------
Confidence 3 3447899999999999986 47899999999999999999999887899999999999999999752 0
Q ss_pred CCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 409 KIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 409 ~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.+..++.+.|++++||.+.||..|+. ++++||+++.++++|++++++|+++++
T Consensus 366 --~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 366 --IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp --CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred --CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 15678999998878999999999975 589999999999999999999998864
No 43
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.8e-49 Score=398.53 Aligned_cols=366 Identities=29% Similarity=0.499 Sum_probs=306.9
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKE 147 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~ 147 (471)
+++++..++++.+..+...+.. +++|+|+.|+|++++|+.+.+++.+++.+ ...|++..|..+||+.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~-----~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~-- 74 (381)
T 1v2d_A 3 LHPRTEAAKESIFPRMSGLAQR-----LGAVNLGQGFPSNPPPPFLLEAVRRALGR-QDQYAPPAGLPALREALAEEF-- 74 (381)
T ss_dssp CCGGGGGC---CHHHHHHHHHH-----HTCEECCCCSCSSCCCHHHHHHHHHHTTT-SCSCCCTTCCHHHHHHHHHHH--
T ss_pred hhhhhhhcCccHHHHHHHHHhc-----CCeEEecCCCCCCCCCHHHHHHHHHHHHH-hcCCCCCCCCHHHHHHHHHhc--
Confidence 5677788877776665544332 34899999999998899999999998865 567988789999999999995
Q ss_pred HhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCC--CCCCCcCCHHHHHhhh
Q 012095 148 ENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTR--ISENFLLDPKVLESKL 225 (471)
Q Consensus 148 ~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~--~~~~~~ld~e~l~~~l 225 (471)
+ +++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.++++ ++ ++.+|+++|++++
T Consensus 75 --~--~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~~~l 149 (381)
T 1v2d_A 75 --A--VEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALEKAL 149 (381)
T ss_dssp --T--SCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHHTTC
T ss_pred --C--CChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHHHhc
Confidence 3 467899999999999999999999999999999999999999999999999999986 32 3779999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|.++.+ +....++..+ ..++++++.||||.+|
T Consensus 150 ~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~-g~~~~~~~~~--~~~~~~~~~s~sK~~~ 225 (381)
T 1v2d_A 150 TPRTRALLLNTPMNPTGLVFGERELEAIARLARAH-DLFLISDEVYDELYY-GERPRRLREF--APERTFTVGSAGKRLE 225 (381)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBS-SSCCCCHHHH--CTTTEEEEEEHHHHTT
T ss_pred CcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEEcCcccccc-CCCCCCHHHh--cCCCEEEEeechhhcC
Confidence 88899999999999999999999999999999999 999999999999887 4333444443 3578999999999999
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
++|+|+||+++++++++.+........++++++.|.++.++|+... ..+++++++++++++++++.+.|++. |+++..
T Consensus 226 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 303 (381)
T 1v2d_A 226 ATGYRVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLAR-REGFYEALREGYRRRRDLLAGGLRAM-GLRVYV 303 (381)
T ss_dssp CGGGCCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred CcccceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC
Confidence 9999999999999999999887766677789999999999988521 04678899999999999999999986 899888
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC----CCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD----DTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~----~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
|.+++|+|++++.. + +..+++++||.+.||..|+. ++++|++++.+++++++++++|+++
T Consensus 304 ~~~~~~~~~~~~~~------------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 304 PEGTYFLMAELPGW------------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRV 367 (381)
T ss_dssp CSBSSEEEEECTTC------------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCcceEEEEecChH------------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHH
Confidence 88899999998641 2 34455566999999998874 5799999999999999999999999
Q ss_pred HHhhCCC
Q 012095 462 LLTLRPG 468 (471)
Q Consensus 462 l~~~~~~ 468 (471)
+++.+..
T Consensus 368 l~~~r~~ 374 (381)
T 1v2d_A 368 VNSPREA 374 (381)
T ss_dssp C------
T ss_pred Hhhcccc
Confidence 8876543
No 44
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=4e-50 Score=408.91 Aligned_cols=370 Identities=16% Similarity=0.182 Sum_probs=305.2
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCC---CCCCCCh--HHHHHHHHHHHHc-CCCCCCCCCCCHHHHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAG---EPDFDTP--VLIAEAGINAIRE-GFTRYTPNAGTLELRS 139 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g---~~~~~~p--~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~ 139 (471)
+++++++..++++++..+...+.. ...+++|+|+.| +|+..+| +.+.+++.+++.+ ...+|++..|..++|+
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 99 (420)
T 4f4e_A 22 MSLFSAVELAPRDPILGLNEAFNA--DTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA 99 (420)
T ss_dssp CCTTTTCCCCCCCHHHHHHHHHHH--CCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred cCHhhcCCcCCCChHHHHHHHHHh--cCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence 457889999999988888766554 234579999999 6776665 8999999998876 4568999999999999
Q ss_pred HHHHHHHHHhCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCc
Q 012095 140 AICHKLKEENGLSYTPD--QILVSNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFL 215 (471)
Q Consensus 140 ~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ 215 (471)
++++++....+..++++ +|++|+|+++++..++ ..++++||+|++++|+|.+|...++..|++++.+|+..++++.
T Consensus 100 ~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (420)
T 4f4e_A 100 SVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG 179 (420)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred HHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence 99999976555444678 9999999999999984 4668999999999999999999999999999999985445788
Q ss_pred CCHHHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-CccccccCCCCC
Q 012095 216 LDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMW 291 (471)
Q Consensus 216 ld~e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~ 291 (471)
+|++.+++.++ ++++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++. ...++..+....
T Consensus 180 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~ 258 (420)
T 4f4e_A 180 VNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKAR-RLVPFLDIAYQGFGESIEADAAAVRLFAAAN 258 (420)
T ss_dssp ECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCTTGGGHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEccccccccCCcchhhHHHHHHHhcC
Confidence 99999999997 5778889999999999999999999999999999 999999999999988742 233444443346
Q ss_pred CceEEEecCCcccCccchhheeeEc---CHHHHHH----HHHHHhcccCCCChHHHHHHHHHHhccCC---ChHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTGWRLGYIAG---PKHFVAA----CNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMV 361 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G~R~G~v~~---~~~~i~~----l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---~~~~~~~~~ 361 (471)
+++++++||||.||++|+|+||+++ ++++++. +....+....+++.+.|.++..+|..... .++++++++
T Consensus 259 ~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 338 (420)
T 4f4e_A 259 LNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR 338 (420)
T ss_dssp CCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 8899999999999999999999863 5666554 33333445667889999999988875211 146688999
Q ss_pred HHHHHHHHHHHHHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCC
Q 012095 362 KAFRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDT 438 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~ 438 (471)
++|+++++++.+.|+++ +|+.+..|++|||+|+.++ ... +..+++++||.+.|+.
T Consensus 339 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~-~~~~l~~~gI~v~~~~------ 396 (420)
T 4f4e_A 339 DRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT---------------SAQ-VDRLREEFGIYAVSTG------ 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC---------------HHH-HHHHHHHHCEECCTTS------
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC---------------HHH-HHHHHHhCCEEecCCC------
Confidence 99999999999999986 4788888999999997763 334 4445556699999963
Q ss_pred cEEEEeec-CHHHHHHHHHHHHHHH
Q 012095 439 CIRISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 439 ~iRis~~~-~~e~i~~~~~~l~~~l 462 (471)
|++++. +++++++++++|++++
T Consensus 397 --Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 --RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp --EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred --eEEEecCCHHHHHHHHHHHHHHh
Confidence 999997 8888999999999876
No 45
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=2.5e-49 Score=400.37 Aligned_cols=372 Identities=25% Similarity=0.393 Sum_probs=298.5
Q ss_pred ccccccccCC-ChHHHHHHHHHHHH--hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHc-----CCCCCCCCCCCHHHHH
Q 012095 68 LSPRVNAVKP-SKTVAITDQATALA--QAGVSVIRLAAGEPDFDTPVLIAEAGINAIRE-----GFTRYTPNAGTLELRS 139 (471)
Q Consensus 68 ~s~~~~~~~~-~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-----~~~~Y~~~~G~~~lr~ 139 (471)
+++++.++.+ +.+..+........ ..|+++|+|+.|++++++|+.+.+++.+++.. ...+|++..|..+||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~ 82 (400)
T 3asa_A 3 RNPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQ 82 (400)
T ss_dssp CCHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHH
T ss_pred cchhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHH
Confidence 4667777766 44555544444332 24678999999999988889999999888764 2467988889999999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCE-EEEecCCCCCCCcCCH
Q 012095 140 AICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADAT-PVILPTRISENFLLDP 218 (471)
Q Consensus 140 ~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~~~~~~ld~ 218 (471)
++++++. +|. +++++|++|+|+++++..++. ++++||.|++++|+|.++...++..|++ ++.+|++.++++..|+
T Consensus 83 ~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~-~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l 158 (400)
T 3asa_A 83 KLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLS-FFGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEF 158 (400)
T ss_dssp HHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHH-HHCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCC
T ss_pred HHHHHHH--cCC-CCHHHEEEccChHHHHHHHHH-HcCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccCh
Confidence 9999964 464 578999999999999998654 5589999999999999999999999999 9999987655555554
Q ss_pred HHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe
Q 012095 219 KVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (471)
Q Consensus 219 e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (471)
++ + +++++|++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..++...+++++++
T Consensus 159 ~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 232 (400)
T 3asa_A 159 PE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEH-EILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEIN 232 (400)
T ss_dssp CT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEE
T ss_pred hh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEe
Confidence 32 1 5789999999999999999999999999999999 9999999999988776543344555543346799999
Q ss_pred cCCcccCccchhheeeEcCHHH-------HHHHHHHHhcc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Q 012095 299 GFSKAFAMTGWRLGYIAGPKHF-------VAACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~~~~~-------i~~l~~~~~~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~ 370 (471)
||||.+|++|+|+||+++++++ ++.+....... ..+++.++|.++.++|+.. +++++++.+++++++
T Consensus 233 s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-----~~~~~~~~~~~~~~~ 307 (400)
T 3asa_A 233 SFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL-----PQLEAIHYYRENSDL 307 (400)
T ss_dssp ECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT-----TTCHHHHHHHHHHHH
T ss_pred cchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcH-----HHHHHHHHHHHHHHH
Confidence 9999999999999999999988 67665432222 2358999999999999862 577888999999999
Q ss_pred HHHHhcCCCCCeeeCCCcceEEeEe-cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecC
Q 012095 371 LVKSFGELEGVKMSEPQGAFYLFID-FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAAS 447 (471)
Q Consensus 371 l~~~L~~~~g~~~~~p~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~ 447 (471)
+.+.|+++ |+++..|.+++|+|++ ++... +..+++++|++++||.+.||..|+. ++++||++..+
T Consensus 308 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~ 375 (400)
T 3asa_A 308 LRKALLAT-GFEVFGGEHAPYLWVKPTQANI-----------SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGK 375 (400)
T ss_dssp HHHHHHHT-TCEEEECSSSSEEEEECCCTTC-----------CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSC
T ss_pred HHHHHHHC-CCeeeCCCCceEEEEeccCCCC-----------CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCC
Confidence 99999988 8988888888999999 76431 4557888888777999999998863 57999998779
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 012095 448 LTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~~~ 466 (471)
++++++++++|++++++..
T Consensus 376 ~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 376 REDILAACERLQMAPALQS 394 (400)
T ss_dssp HHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999887643
No 46
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1e-49 Score=407.03 Aligned_cols=352 Identities=18% Similarity=0.256 Sum_probs=302.1
Q ss_pred CCCeEEcCCCCC-CCCChHHH--HHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---EEEeCChHH
Q 012095 94 GVSVIRLAAGEP-DFDTPVLI--AEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ---ILVSNGAKQ 166 (471)
Q Consensus 94 g~~~i~l~~g~~-~~~~p~~v--~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~---i~it~G~~~ 166 (471)
.+++|+|+.|+| ++++|+.+ .+++.+++.. ...+|++..|..+||+++++++.+.+ +.+++++ |++|+|+++
T Consensus 46 ~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~ 124 (430)
T 2x5f_A 46 KSTTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTH 124 (430)
T ss_dssp TTCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHH
T ss_pred CCCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchH
Confidence 356899999999 88877666 7776665544 46789888899999999999998764 6677889 999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcc
Q 012095 167 SILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTG 242 (471)
Q Consensus 167 al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG 242 (471)
++..++++++++||+|++++|+|.++...++. .|++++.++++.++ |.+|++++++++++ +++++++++||||||
T Consensus 125 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG 203 (430)
T 2x5f_A 125 GLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPNNPTG 203 (430)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTC
T ss_pred HHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCC
Confidence 99999999999999999999999999999999 99999999987544 77999999999976 789999999999999
Q ss_pred cCCCHHHHHHHHHHHHh-----CCCeEEEEccCCCccccCCCCccccc-cCCCCCCc---eEEEecCCcccCccchhhee
Q 012095 243 SVYPKNLLDEIARIVAK-----HPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWER---TLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~-----~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~~---~i~~~S~SK~~g~~G~R~G~ 313 (471)
.+++.+++++|+++|++ | +++||+||+|.++.+++....++. .+....++ +++++||||.+|++|+|+||
T Consensus 204 ~~~~~~~l~~i~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~ 282 (430)
T 2x5f_A 204 YTPTHKEVTTIVEAIKALANKGT-KVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGF 282 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTC-EEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEE
T ss_pred CcCCHHHHHHHHHHHHhhhhccC-CEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEE
Confidence 99999999999999999 9 999999999999988765444444 44333567 89999999999999999999
Q ss_pred eEc---CHHHHHHHHHHHhc----ccCCCChHHHHHHHHHHh-ccCCChHHHHHHHHHHHHHHHHHHHHhc----CCCCC
Q 012095 314 IAG---PKHFVAACNKIQSQ----FTSGASSISQKAGVAALG-LGYAGGEVVSKMVKAFRERRDFLVKSFG----ELEGV 381 (471)
Q Consensus 314 v~~---~~~~i~~l~~~~~~----~~~~~~~~~q~aa~~~L~-~~~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~g~ 381 (471)
+++ ++++++.+...... ..++++.+.|.++.++|+ +..+ .+.++++++.++++++.+.+.|+ +. |+
T Consensus 283 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~ 360 (430)
T 2x5f_A 283 MTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQF-DKEIEQNIQTLKERYEVTKEVVYADQYHS-HW 360 (430)
T ss_dssp EEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHH-HHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TE
T ss_pred EEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHH-HHHHHHHHHHHHHHHHHHHHHHHhhCCCC-Cc
Confidence 999 99999999876655 567799999999999998 6211 23344499999999999999998 55 78
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee-cCHHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-ASLTTLQAAVERIKK 460 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~-~~~e~i~~~~~~l~~ 460 (471)
.+..|++|+|+|++++ . .+..+++++|++++||.+.|| .++++||+++ .+++++++++++|++
T Consensus 361 ~~~~~~~g~~~~~~~~-~-----------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l~~ 424 (430)
T 2x5f_A 361 QAYDFNSGYFMAIKVH-D-----------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSIAK 424 (430)
T ss_dssp EECCCCBSSEEEEEES-S-----------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHHHH
T ss_pred eeeCCCceEEEEeCCC-C-----------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHHHH
Confidence 8888999999999997 2 167899999987459999998 3579999999 588999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
++++++
T Consensus 425 ~l~~~~ 430 (430)
T 2x5f_A 425 AIDDLR 430 (430)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998753
No 47
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.9e-48 Score=393.42 Aligned_cols=367 Identities=21% Similarity=0.367 Sum_probs=312.8
Q ss_pred cccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHH
Q 012095 67 SLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFD--TPVLIAEAGINAIREG---FTRYTPNAGTLELRSAI 141 (471)
Q Consensus 67 ~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~--~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~i 141 (471)
+++++...+.++.+..+...+ .++++|+|+.|.++.. +++.+.+++.+++.+. ..+|++..|..+||+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~l 83 (397)
T 2zyj_A 9 AFGKGAGRIQASTIRELLKLT-----QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFV 83 (397)
T ss_dssp HSCGGGGGCCCCHHHHHHHHH-----TSTTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHH
T ss_pred HhhhhhcccCchHHHHHHhhc-----cCCCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHH
Confidence 367777777777665544322 3567999999987643 5788999998887642 36898888999999999
Q ss_pred HHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHH
Q 012095 142 CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVL 221 (471)
Q Consensus 142 a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l 221 (471)
++++ | +++++|++|+|+++++..++++++++||+|++++|+|+++...++..|++++.+|++.+ ++|+++|
T Consensus 84 a~~~----g--~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l 154 (397)
T 2zyj_A 84 AEWI----G--VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDAL 154 (397)
T ss_dssp HHHH----T--SCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHH
T ss_pred HHHh----C--CChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHH
Confidence 9998 4 46789999999999999999999999999999999999999999999999999998643 3899999
Q ss_pred Hhhhcc-CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC---CceEE
Q 012095 222 ESKLTE-KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW---ERTLT 296 (471)
Q Consensus 222 ~~~l~~-~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~---~~~i~ 296 (471)
++++++ ++++|+ +++||||||.+++.+++++|+++|++| +++||+||+|.++.+++....++..+.. . +++++
T Consensus 155 ~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~ 232 (397)
T 2zyj_A 155 EEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMER-GLVVVEDDAYRELYFGEARLPSLFELAR-EAGYPGVIY 232 (397)
T ss_dssp HHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCSSCCCCCHHHHHH-HHTCCCEEE
T ss_pred HHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeCCcccccCCCCCCCchhhhCc-ccCCCeEEE
Confidence 999976 789875 699999999999999999999999999 9999999999999887654444444432 2 68899
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCCh-HHHHHHHHHHHHHHHHHHHHh
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG-EVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~-~~~~~~~~~~~~~r~~l~~~L 375 (471)
++||||.+| +|+|+||+++++++++.+......+.++++.++|.++.++|+.. . ++++++++.++++++++.+.|
T Consensus 233 ~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~~~~l~~~L 308 (397)
T 2zyj_A 233 LGSFSKVLS-PGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEG---FSERLERVRRVYREKAQAMLHAL 308 (397)
T ss_dssp EEESTTTTC-GGGCCEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTT---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eeccccccc-ccceeEEEecCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 99999999999999999988777667778999999999999862 2 678899999999999999999
Q ss_pred cC-CC-CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----CCCcEEEEeec-CH
Q 012095 376 GE-LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----DDTCIRISYAA-SL 448 (471)
Q Consensus 376 ~~-~~-g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----~~~~iRis~~~-~~ 448 (471)
++ +| |+.+..|.+|+|+|++++.. .+..+++++|+++ ||.+.||..|+ .++++||+++. ++
T Consensus 309 ~~~~~~g~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~~~~~~ 376 (397)
T 2zyj_A 309 DREVPKEVRYTRPKGGMFVWMELPKG-----------LSAEGLFRRALEE-NVAFVPGGPFFANGGGENTLRLSYATLDR 376 (397)
T ss_dssp HHHSCTTSEECCCSBSSEEEEECSTT-----------CCHHHHHHHHHHT-TEEEEESGGGCTTSCCTTEEEEECSSSCH
T ss_pred HHHCCCCeEEccCCccEEEEEEcCCC-----------CCHHHHHHHHHHC-CCEEechHHhcCCCCCCCeEEEEcCCCCH
Confidence 87 57 68888888999999999753 2678899999887 99999999886 35799999998 79
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012095 449 TTLQAAVERIKKGLLTL 465 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~~ 465 (471)
+++++++++|+++++++
T Consensus 377 ~~i~~~~~~l~~~l~~~ 393 (397)
T 2zyj_A 377 EGIAEGVRRLGRALKGL 393 (397)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 48
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1.9e-48 Score=397.42 Aligned_cols=360 Identities=20% Similarity=0.351 Sum_probs=297.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH-----------cCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--CCCCcEEEeC
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIR-----------EGFTRYTPNAGTLELRSAICHKLKEENGLS--YTPDQILVSN 162 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~-----------~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~--~~~~~i~it~ 162 (471)
.+|+|+.|++.++++ .+.+++.+... ....+|++..|..+||+++++++++.+|.. +++++|++|+
T Consensus 37 ~~i~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~ 115 (428)
T 1iay_A 37 GVIQMGLAENQLCLD-LIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAG 115 (428)
T ss_dssp SBEECSSCCCCSSHH-HHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEE
T ss_pred ceeeeccccchhhHH-HHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEcc
Confidence 589999999887654 77777764310 113578777899999999999999988865 6789999999
Q ss_pred ChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH-HHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEc
Q 012095 163 GAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILC 235 (471)
Q Consensus 163 G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~ 235 (471)
|+++++..++++++++||.|++++|+|.++...+ ...|++++.+|++.+++|.+|++++++++++ ++++|+++
T Consensus 116 G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~ 195 (428)
T 1iay_A 116 GATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILT 195 (428)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEc
Confidence 9999999999999999999999999999998755 4789999999987666788999999998863 68899999
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-------CCceEEEecCCcccCccc
Q 012095 236 SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-------WERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 236 ~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-------~~~~i~~~S~SK~~g~~G 308 (471)
+||||||.+++.+++++|+++|++| +++||+||+|.++.|++....++..+... .++++++.||||.||++|
T Consensus 196 ~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~G 274 (428)
T 1iay_A 196 NPSNPLGTTLDKDTLKSVLSFTNQH-NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPG 274 (428)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGG
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHC-CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCC
Confidence 9999999999999999999999999 99999999999988765433344444322 478999999999999999
Q ss_pred hhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 309 WRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 309 ~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
+|+||+++ ++++++.+.+.... ++.++++|.++.++|+...+.+++++++++.++++++++.+.|+++ |+++.++.
T Consensus 275 lr~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 351 (428)
T 1iay_A 275 FRVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNN 351 (428)
T ss_dssp GCEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCS
T ss_pred ceEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence 99999998 68899988876543 4588999999999987521112477889999999999999999988 88888787
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEee-cCHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYA-ASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~-~~~e~i~~~~~~l~~~l~~ 464 (471)
+|+|+|++++..... . ...+..++++.|++++||.+.||..|+. ++++||+++ .+++++++++++|++++++
T Consensus 352 ~g~~~~~~~~~~~~~--~---~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 426 (428)
T 1iay_A 352 AGLFCWMDLRPLLRE--S---TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRFVGV 426 (428)
T ss_dssp SSSEEEEECGGGCSS--S---SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHHHHHHHT
T ss_pred eeEEEEEechhhcCC--C---chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 899999999753100 0 0003457889888877999999998875 579999999 5999999999999999876
Q ss_pred h
Q 012095 465 L 465 (471)
Q Consensus 465 ~ 465 (471)
.
T Consensus 427 ~ 427 (428)
T 1iay_A 427 E 427 (428)
T ss_dssp T
T ss_pred c
Confidence 4
No 49
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.7e-48 Score=387.67 Aligned_cols=334 Identities=22% Similarity=0.290 Sum_probs=291.7
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
.+++|+|+.|++++++|+.+++++.+++. ...+|++..+ .++|+++++++ | +++++|++|+|+++++..+++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y~~~~~-~~lr~~la~~~----~--~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 29 VKEVIKLASNENPFGTPPKAIECLRQNAN-KAHLYPDDSM-IELKSTLAQKY----K--VQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp CSCCEECSSCCCTTCSCHHHHHHHHHHGG-GTTSCCCTTC-HHHHHHHHHHH----T--CCGGGEEEESSHHHHHHHHHH
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHH-hhccCCCCCh-HHHHHHHHHHh----C--CCcceEEECCCHHHHHHHHHH
Confidence 36799999999999999999999999876 3677866655 89999999987 3 467899999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++++||+|+++.|+|..+...++..|++++.+++ .++++ +|++++++++++++++|++++||||||.+++.+++++|
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l 178 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEF 178 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999998 34567 99999999999899999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCCcccc--CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+++| ++ +++||+||+|.++.| .+....+........+++++++||||.+|++|+|+||+++++++++.+......
T Consensus 179 ~~~~-~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~- 255 (365)
T 3get_A 179 IKGV-NE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAP- 255 (365)
T ss_dssp HHTS-CT-TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCT-
T ss_pred HHhC-CC-CcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCC-
Confidence 9988 68 999999999998875 433333333322235789999999999999999999999999999999887654
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
++++.+.|.++.++|+. .+++++.+++++++++++.+.|+++ |+.+.++.++ |+|++++..
T Consensus 256 -~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-~~~~~~~~~------------ 316 (365)
T 3get_A 256 -FNVSNLALKAAVAAMDD----DEFTEKTLENNFSQMELYKEFAKKH-NIKIIDSYTN-FITYFFDEK------------ 316 (365)
T ss_dssp -TCSCHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEECCCSSS-EEEEECSSS------------
T ss_pred -CCcCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCCCCe-EEEEECCCC------------
Confidence 45899999999999985 6889999999999999999999998 8988766655 589998752
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+..++.+.|.++ ||.+.||..|+ ++++|++++ ++++++++++.|++++
T Consensus 317 ~~~~~~~~l~~~-gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 NSTDLSEKLLKK-GIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CHHHHHHHHHTT-TEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHC-CEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 578899988765 99999999998 899999998 7899999999999876
No 50
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=3.1e-48 Score=392.26 Aligned_cols=366 Identities=16% Similarity=0.142 Sum_probs=292.8
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC-CCCC-h---HHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDT-P---VLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~-~~~~-p---~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (471)
..+...++..+..+...... ...+++|+|+.|.+ ++.. | +.+.+++.+.... +..+|++..|.+++|+++++
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 82 (401)
T 7aat_A 5 SHVEMGPPDPILGVTEAFKR--DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAE 82 (401)
T ss_dssp TTCCCCCCCHHHHHHHHHHH--CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHH
T ss_pred hcCCCCCCChhHHHHHHHhh--CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHHH
Confidence 34555566655554433322 23345899999997 5543 2 4688888777653 56789888999999999999
Q ss_pred HHHHHhCCCCCCCcEEE--eCChHHHHHHHHHHhc---CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAVC---SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~~l~---~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++.+.+|..+++++|++ |+|+++++..++..+. +|||.|++++|+|.+|...++..|++++.+|++.++++.+|+
T Consensus 83 ~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 162 (401)
T 7aat_A 83 LALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLDF 162 (401)
T ss_dssp HHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEECH
T ss_pred HhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccCH
Confidence 99988887777999977 9999999998877664 899999999999999999999999999999987656788999
Q ss_pred HHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCC--ccccccCCCCCCc
Q 012095 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPAT--HTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~~~~ 293 (471)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++.. ..++..+....++
T Consensus 163 ~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
T 7aat_A 163 TGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241 (401)
T ss_dssp HHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEccccccccCCCccccHHHHHHHHhcCCc
Confidence 97777664 5778889999999999999999999999999999 9999999999999876431 1222222233578
Q ss_pred eEEEecCCcccCccchhheeeEc---CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCC---hHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMVKA 363 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~~---~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~---~~~~~~~~~~ 363 (471)
+++++||||.||++|+|+||+++ +++ +++.+.........+++.+.|.++..++.++... .+++++++++
T Consensus 242 ~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 321 (401)
T 7aat_A 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADR 321 (401)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999876 665 5566666666677788888998888888752110 4567888999
Q ss_pred HHHHHHHHHHHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 364 FRERRDFLVKSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
++++|+++.+.|.++ +++.+..|+++||+|++++ . +++..|++++||.+.|+ +
T Consensus 322 ~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~ll~~~gi~v~~~--------~ 377 (401)
T 7aat_A 322 IISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK---------------P-EQVERLTKEFSIYMTKD--------G 377 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEECCTT--------C
T ss_pred HHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC---------------H-HHHHHHHHhCCEeccCC--------C
Confidence 999999999999886 2477788999999997653 2 44567777779999875 5
Q ss_pred EEEeec-CHHHHHHHHHHHHHHH
Q 012095 441 RISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 441 Ris~~~-~~e~i~~~~~~l~~~l 462 (471)
|++++. ++++|++++++|++++
T Consensus 378 Ris~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 378 RISVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred eEEeccCChhhHHHHHHHHHHHh
Confidence 999986 6677999999999876
No 51
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=9.3e-48 Score=385.14 Aligned_cols=328 Identities=21% Similarity=0.332 Sum_probs=292.8
Q ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH
Q 012095 115 EAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE 194 (471)
Q Consensus 115 ~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~ 194 (471)
+++.+++..+...|++..|..+||+++++++. .+++++|++|+|+++++..++++++++||+|++++|+|.++..
T Consensus 46 ~~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 46 EDFYKKLQGTKLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHHTSCCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHHhcCCcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 45666677778899999999999999999862 2577899999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc
Q 012095 195 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI 274 (471)
Q Consensus 195 ~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~ 274 (471)
.++..|++++.++++.+++|.+|++++++++++++++|++++|+||||.+++.+++++|+++|++| |++||+||+|..+
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~-~~~li~De~~~~~ 199 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEV-GAYILSDEVYRSF 199 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECCSCCC
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccc
Confidence 999999999999998777888999999999999999999999999999999999999999999999 9999999999998
Q ss_pred ccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCCh
Q 012095 275 IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGG 354 (471)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 354 (471)
.+++ ...+... .+++++++||||.+|++|+|+||+++++++++.+......+.++++.+.|.++..+|.. .+
T Consensus 200 ~~~~--~~~~~~~---~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~ 271 (375)
T 3op7_A 200 SELD--VPSIIEV---YDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAH---YQ 271 (375)
T ss_dssp SSSC--CCCHHHH---CTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHT---HH
T ss_pred cccC--CCchhhh---cCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhc---cH
Confidence 7652 2222222 46789999999999999999999999999999999888878888899999999999885 46
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 355 EVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
.++++.++.++++++.+.+.|++.+++.+..|.+++++|+.++.. .+..+++++|++++||.+.||..|
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ll~~~gi~v~~g~~~ 340 (375)
T 3op7_A 272 EILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVD-----------MPMEDFCLQLLQEHGVLLVPGNRF 340 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCS-----------SCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCC-----------CCHHHHHHHHHHhCCEEEeChhhh
Confidence 788999999999999999999988889988899999899988753 267889999877779999999999
Q ss_pred CCCCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 435 GDDTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 435 ~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+.++++|++++.+.+++++++++|.+++++++.
T Consensus 341 ~~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 341 ERDGYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp TCTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred CCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 888999999999889999999999999988764
No 52
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2.8e-48 Score=395.57 Aligned_cols=356 Identities=15% Similarity=0.184 Sum_probs=289.9
Q ss_pred HHHHHHHhcCCCeEEcCCCCCC---CCChHHHHHHHHHHH--Hc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc
Q 012095 85 DQATALAQAGVSVIRLAAGEPD---FDTPVLIAEAGINAI--RE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQ 157 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~---~~~p~~v~~a~~~~~--~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~ 157 (471)
..+.++...| .+|+|+.|+|+ +++|+.+.+++.+.+ .. ...+|++..|..+||+++++++ + +++++
T Consensus 23 ~~~~~l~~~~-~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~----~--~~~~~ 95 (422)
T 3d6k_A 23 AKYAELKAKN-LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL----G--LPADL 95 (422)
T ss_dssp HHHHHHHHTT-CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH----T--CCGGG
T ss_pred HHHHHHhccC-CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh----C--CChhH
Confidence 3444555554 48999999998 777777888776542 12 2468999999999999999998 3 57899
Q ss_pred EEEeCChHHHH--HHHHHHhcCC------------CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHh
Q 012095 158 ILVSNGAKQSI--LQAVLAVCSP------------GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES 223 (471)
Q Consensus 158 i~it~G~~~al--~~~~~~l~~~------------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~ 223 (471)
|++|+|+++++ ..++++++.+ +|+|++++|+|+.|...++..|++++.+|++.+ ++|++++++
T Consensus 96 i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~ 172 (422)
T 3d6k_A 96 VVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRE 172 (422)
T ss_dssp EEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHH
T ss_pred EEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHH
Confidence 99999999987 6677777766 347999999999999999999999999998753 389999999
Q ss_pred hhcc-CCcEEE-EcCCCCCcccCCCHHHHHHHHHHHH-hCCCeEEEEccCCCc--cccCCCCccccccC---CCCCCceE
Q 012095 224 KLTE-KSRLLI-LCSPSNPTGSVYPKNLLDEIARIVA-KHPRLLVLSDEIYEH--IIYAPATHTSFASL---PGMWERTL 295 (471)
Q Consensus 224 ~l~~-~~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~-~~~~~~ii~De~y~~--~~~~~~~~~~~~~~---~~~~~~~i 295 (471)
++++ ++++|+ +++||||||.+++.+++++|+++|+ +| +++||+||+|.+ +.+++....++..+ ....++++
T Consensus 173 ~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 251 (422)
T 3d6k_A 173 LVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAP-DFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFW 251 (422)
T ss_dssp HHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEE
T ss_pred HHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhcc-CCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEE
Confidence 9975 789888 6999999999999999999999999 89 999999999986 43333223344222 22357899
Q ss_pred EEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc-cCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~-~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+++||||. +++|+|+||+++++++++.+.......+++++.++|.++.++|+. +. ..++++++++.|+++++.+.+.
T Consensus 252 ~~~S~SK~-~~~GlriG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 329 (422)
T 3d6k_A 252 FMSSTSKI-THAGSGVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAG-LKAHMLKHAASLAPKFERVLEI 329 (422)
T ss_dssp EEEESTTT-SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEcChhhh-cCcccceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcch-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 679999999999999999999888877888999999999999975 21 1477888999999999988888
Q ss_pred hcC----CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCCC-----CCCcEEEEe
Q 012095 375 FGE----LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAFG-----DDTCIRISY 444 (471)
Q Consensus 375 L~~----~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p-g~~f~-----~~~~iRis~ 444 (471)
|.+ ++++.+..|++|+|+|++++.. +...+.+.|. ++||.+.| |..|. .++++|||+
T Consensus 330 L~~~l~~~~~~~~~~p~~g~~~~~~~~~~------------~~~~~~~~l~-~~gV~v~~~g~~f~~~~~~~~~~iRis~ 396 (422)
T 3d6k_A 330 LDSRLSEYGVAKWTSPTGGYFISVDVVPG------------TASRVVELAK-EAGIALTGAGSSFPLHNDPNNENIRLAP 396 (422)
T ss_dssp HHHHHGGGTCEEECCCSBSSCEEEEESTT------------CHHHHHHHHH-HTTEECCCTTTTSGGGCCTTSCEEEECC
T ss_pred HHHhcCcCCceEEeCCCcceEEEEECCCC------------CHHHHHHHHH-HCCeEEEcCccccCCCCCCCCCeEEEec
Confidence 865 3346777889999999999742 4566766554 56999999 45563 257999999
Q ss_pred ec-CHHHHHHHHHHHHHHHHhhC
Q 012095 445 AA-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 445 ~~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. +++++++++++|+++++++.
T Consensus 397 ~~~~~e~i~~~~~~l~~~l~~~~ 419 (422)
T 3d6k_A 397 SLPPVAELEVAMDGFATCVLMAA 419 (422)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Confidence 95 99999999999999988754
No 53
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.6e-47 Score=391.35 Aligned_cols=361 Identities=20% Similarity=0.338 Sum_probs=302.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC------------CCCCCCCCCHHHHHHHHHHHHHHhC--CCCCCCcEEEe
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF------------TRYTPNAGTLELRSAICHKLKEENG--LSYTPDQILVS 161 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~------------~~Y~~~~G~~~lr~~ia~~~~~~~g--~~~~~~~i~it 161 (471)
.+|+|+.+++.+. ++.+.+++.+...... .+|++..|..+||+++++++.+.+| +++++++|++|
T Consensus 39 ~~i~lg~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~ 117 (435)
T 3piu_A 39 GIIQMGLAENQLC-FDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLT 117 (435)
T ss_dssp SBEECSSCCCCSS-HHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEE
T ss_pred CeEEecccccccc-HHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEc
Confidence 5899999888776 6667777765433211 4698999999999999999986655 55678999999
Q ss_pred CChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH-HcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEE
Q 012095 162 NGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR-IADATPVILPTRISENFLLDPKVLESKLTE------KSRLLIL 234 (471)
Q Consensus 162 ~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i 234 (471)
+|+++++..++.+++++||.|++++|+|.++...+. ..|++++.++++.+++|.+|+++|++++++ ++++|++
T Consensus 118 ~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i 197 (435)
T 3piu_A 118 AGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLV 197 (435)
T ss_dssp EHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEE
Confidence 999999999999999999999999999999998888 789999999998777788999999999975 7899999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC---------CCceEEEecCCcccC
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM---------WERTLTVNGFSKAFA 305 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~---------~~~~i~~~S~SK~~g 305 (471)
++|+||||.+++.+++++|+++|++| +++||+||+|..+.|++....++..+... .+++++++||||.+|
T Consensus 198 ~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g 276 (435)
T 3piu_A 198 TNPSNPLGTTMTRNELYLLLSFVEDK-GIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLG 276 (435)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccC
Confidence 99999999999999999999999999 99999999999988877554444443222 578999999999999
Q ss_pred ccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 306 MTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 306 ~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
++|+|+||+++ ++++++.+.+.... .+.+++.|.++.++|......++++++.+++++++++++.+.|.++ |+++.
T Consensus 277 ~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 353 (435)
T 3piu_A 277 LPGFRVGAIYSNDDMVVAAATKMSSF--GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCL 353 (435)
T ss_dssp CGGGCEEEEEESCHHHHHHHHHHGGG--SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEC
T ss_pred CCceeEEEEEeCCHHHHHHHHHHhhc--CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCccc
Confidence 99999999999 56788877766543 3478899999999888521113466788899999999999999998 89998
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeec-CHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~-~~e~i~~~~~~l~~~ 461 (471)
.+.+|+|+|++++...... ...+..+++++|++++||.+.||..|+. ++++||+++. +++++++++++|+++
T Consensus 354 ~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~l~~l~~~ 428 (435)
T 3piu_A 354 NGNAGLFCWVDMRHLLRSN-----TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 428 (435)
T ss_dssp CCCSSSEEEEECGGGSSSS-----SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEEEcccccccC-----CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 9999999999997542100 0003468889998888999999998864 5799999998 999999999999999
Q ss_pred HHhhC
Q 012095 462 LLTLR 466 (471)
Q Consensus 462 l~~~~ 466 (471)
+++++
T Consensus 429 l~~~~ 433 (435)
T 3piu_A 429 VGEYY 433 (435)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98765
No 54
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=4.4e-47 Score=378.55 Aligned_cols=332 Identities=19% Similarity=0.282 Sum_probs=286.8
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
++++|+|+.|++++++|+.+.+++.+.+. ....| |..+..++|++++++++ +++++|++|+|+++++..+++
T Consensus 31 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~-~~~~y-~~~~~~~lr~~la~~~~------~~~~~v~~~~g~t~a~~~~~~ 102 (363)
T 3ffh_A 31 LTKITKLSSNENPLGTSKKVAAIQANSSV-ETEIY-PDGWASSLRKEVADFYQ------LEEEELIFTAGVDELIELLTR 102 (363)
T ss_dssp CSCCEECSSCSCTTCCCHHHHHHHHTCBS-CCCBC-----CHHHHHHHHHHHT------CCGGGEEEESSHHHHHHHHHH
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHHHH-HhhcC-CCcchHHHHHHHHHHhC------CChhhEEEeCCHHHHHHHHHH
Confidence 45799999999999999999999988653 34566 67889999999999973 467899999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++++||+|++++|+|.++...++..|++++.+++++ ++.+|++++++++++++++|++++|+||||.+++.+++.+|
T Consensus 103 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l 180 (363)
T 3ffh_A 103 VLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAF 180 (363)
T ss_dssp HHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999874 57799999999999899999999999999999998888888
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
++.|++ |+++|+||+|.++.+ +. ..+........++++++.||||.+|++|+|+||+++++++++.+..... .+
T Consensus 181 ~~~~~~--~~~li~De~~~~~~~-~~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--~~ 254 (363)
T 3ffh_A 181 LDRVPS--DVLVVLDEAYIEYVT-PQ-PEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRP--PF 254 (363)
T ss_dssp HTTSCT--TSEEEEECTTGGGCS-SC-CCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCC--SC
T ss_pred HHhCCC--CcEEEEeCchHhhcC-cc-ccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCC--CC
Confidence 887754 799999999998877 32 2233333334689999999999999999999999999999999888665 45
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
+++.+.|.++.++|+. .+++++.+++++++++++.+.|++++|+.+.++.+ +|+|++++. +.
T Consensus 255 ~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~~~~~-~~~~~~~~~-------------~~ 316 (363)
T 3ffh_A 255 NTTSIGQKLAIEAIKD----QAFIGECRTSNANGIKQYEAFAKRFEKVKLYPANG-NFVLIDLGI-------------EA 316 (363)
T ss_dssp CCBHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHCTTCEECCCCS-SEEEEECSS-------------CH
T ss_pred CCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHhhCCCceECCCCC-eEEEEECCC-------------CH
Confidence 6899999999999984 68899999999999999999999866998876655 568998863 57
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.++.+.|.++ ||.+.||..|+.++++|++++ +++++++++++|+++
T Consensus 317 ~~~~~~l~~~-gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 317 GTIFSYLEKN-GYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHHHHHHT-TEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC-CeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 7899988875 999999999998999999998 889999999999875
No 55
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=1.2e-48 Score=396.48 Aligned_cols=370 Identities=13% Similarity=0.100 Sum_probs=285.7
Q ss_pred cccccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q 012095 65 DVSLSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 65 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~ 143 (471)
+-+++.++..++++++..+.+.+.. ...+++|+|+.|+| +++.|+.+.+++.++......+|++..|..+||+++++
T Consensus 13 ~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~ 90 (409)
T 4eu1_A 13 EAQTQGPGSMGKPDPILGLGQDFRM--DPAKRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYAPVTGIASFVEEAQK 90 (409)
T ss_dssp --------------CHHHHHHHHHH--CCCSSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCCCTTCCHHHHHHHHH
T ss_pred hhhHhhcCCCCCCChHHHHHHHHhh--CCCcCceeeeeeEEECCCCCEeecHHHHhcCccccccCCCCCCcHHHHHHHHH
Confidence 4456778888999877666554433 34467999999997 88777777788777644456789999999999999999
Q ss_pred HHHHHhCCCCCCCcE--EEeCChHHHHHHH---HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 144 KLKEENGLSYTPDQI--LVSNGAKQSILQA---VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i--~it~G~~~al~~~---~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
++....+.++++++| ..|.|+++++..+ +++++++||.|++++|+|.+|...++..|++++.++++.+++|.+|+
T Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 170 (409)
T 4eu1_A 91 LCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNL 170 (409)
T ss_dssp HHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECH
T ss_pred HHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcH
Confidence 984222211236788 4589999988765 44567899999999999999999999999999999986566788999
Q ss_pred HHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--CccccccCCCCCCc
Q 012095 219 KVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA--THTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~ 293 (471)
+++++++++ +++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ...++..+....++
T Consensus 171 ~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 249 (409)
T 4eu1_A 171 AGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRR-NHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPN 249 (409)
T ss_dssp HHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSC
T ss_pred HHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccCCcccchHHHHHHHhhCCc
Confidence 999999862 455666799999999999999999999999999 999999999999988652 12233333233578
Q ss_pred eEEEecCCcccCccchhheee---EcCHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCC---hHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYI---AGPKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEVVSKMVKA 363 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v---~~~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~---~~~~~~~~~~ 363 (471)
+++++||||.+|++|+|+||+ +++++ +++.+.........+++.+.|.++..+|..+... .+++++++++
T Consensus 250 ~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 329 (409)
T 4eu1_A 250 LIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSR 329 (409)
T ss_dssp CEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 899999999999999999996 56777 7777777666667778999999999999852110 3447888999
Q ss_pred HHHHHHHHHHHhcCCCC----CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCc
Q 012095 364 FRERRDFLVKSFGELEG----VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTC 439 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g----~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~ 439 (471)
++++++++.+.|+++ | +.+..|+++||+|++++ .+++.+|++++||.+.||.
T Consensus 330 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ll~~~gv~v~p~~------- 385 (409)
T 4eu1_A 330 IAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT----------------REQVELLRSEYHIYMTLNG------- 385 (409)
T ss_dssp HHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC----------------HHHHHHHHHHHCEECCTTC-------
T ss_pred HHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC----------------HHHHHHHHHcCCEEEcCCC-------
Confidence 999999999999987 4 77788999999996542 3567788877799999973
Q ss_pred EEEEeec-CHHHHHHHHHHHHHHH
Q 012095 440 IRISYAA-SLTTLQAAVERIKKGL 462 (471)
Q Consensus 440 iRis~~~-~~e~i~~~~~~l~~~l 462 (471)
||+++. +++++++++++|++++
T Consensus 386 -Ri~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 386 -RAAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp -EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -EEEEEecCHhhHHHHHHHHHHHh
Confidence 999987 7788999999998876
No 56
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=9.7e-48 Score=387.83 Aligned_cols=365 Identities=18% Similarity=0.160 Sum_probs=295.6
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCC---CCCCCCh--HHHHHHHHH-HHHc-CCCCCCCCCCCHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAG---EPDFDTP--VLIAEAGIN-AIRE-GFTRYTPNAGTLELRSAIC 142 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g---~~~~~~p--~~v~~a~~~-~~~~-~~~~Y~~~~G~~~lr~~ia 142 (471)
+++...+++.+..+...+.. ...+++|+|+.| +++.++| +.+.+++.+ ++.. +..+|++..|..++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la 80 (397)
T 3fsl_A 3 QKVDAYAGDPILTLMERFKE--DPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp TTCCCCCCCHHHHHHHHHHT--CCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHH
T ss_pred ccCCCCCCCchhhHHHHHhc--CCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHH
Confidence 35666777777666554432 234579999999 5666554 899999998 8865 4568988899999999999
Q ss_pred HHHHHHhCCCCCCC--cEEEeCChHHHHHHHH--HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 143 HKLKEENGLSYTPD--QILVSNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 143 ~~~~~~~g~~~~~~--~i~it~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
+++...++..++++ +|++|+|+++++..++ ..++++||+|++++|+|.+|...++..|++++.+++..++++.+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 160 (397)
T 3fsl_A 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECH
T ss_pred HHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcH
Confidence 99976655444678 9999999999999985 4567999999999999999999999999999999985556788999
Q ss_pred HHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-CccccccCCCCCCce
Q 012095 219 KVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMWERT 294 (471)
Q Consensus 219 e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~ 294 (471)
++++++++ ++++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ...++..+....+++
T Consensus 161 ~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 3fsl_A 161 NDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAR-ELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPA 239 (397)
T ss_dssp HHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhC-CEEEEEecCchhhccCcccccHHHHHHHhcCCCE
Confidence 99999997 5678888999999999999999999999999999 999999999999988632 233444443346889
Q ss_pred EEEecCCcccCccchhheeeEc---CHHHHHHHHH----HHhcccCCCChHHHHHHHHHHhccCC---ChHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAG---PKHFVAACNK----IQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAF 364 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~---~~~~i~~l~~----~~~~~~~~~~~~~q~aa~~~L~~~~~---~~~~~~~~~~~~ 364 (471)
++++||||.+|++|+|+||+++ ++++++.+.. .......+++.++|.++..+|..... ..++++++++++
T Consensus 240 i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~ 319 (397)
T 3fsl_A 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMRTRI 319 (397)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999974 5566654432 22334556788999999888875211 046788999999
Q ss_pred HHHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEE
Q 012095 365 RERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR 441 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iR 441 (471)
+++++++.+.|++++ |+.+..|++++|+|++++ ... +..+++++||.+.||. |
T Consensus 320 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~~l~~~gi~v~~g~--------R 375 (397)
T 3fsl_A 320 LAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS---------------AAQ-VDRLREEFGVYLIASG--------R 375 (397)
T ss_dssp HHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC---------------HHH-HHHHHHTTCEECCTTC--------E
T ss_pred HHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC---------------HHH-HHHHHHhCCEEECCCC--------e
Confidence 999999999999864 788888999999998763 333 4556667799999985 9
Q ss_pred EEeec-CHHHHHHHHHHHHHH
Q 012095 442 ISYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 442 is~~~-~~e~i~~~~~~l~~~ 461 (471)
++++. ++++|++++++|+++
T Consensus 376 is~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 376 MCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp EEGGGCCTTTHHHHHHHHHHH
T ss_pred EEEEecCHhhHHHHHHHHHhh
Confidence 99998 888899999999876
No 57
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=1e-47 Score=388.24 Aligned_cols=368 Identities=13% Similarity=0.137 Sum_probs=279.1
Q ss_pred cccccccc---CCChHHHHHHHHHHHHhcCCCeEEcCCCC---CCCC--ChHHHHHHHHHHHHcCCC-CCCCCCCCHHHH
Q 012095 68 LSPRVNAV---KPSKTVAITDQATALAQAGVSVIRLAAGE---PDFD--TPVLIAEAGINAIREGFT-RYTPNAGTLELR 138 (471)
Q Consensus 68 ~s~~~~~~---~~~~~~~~~~~~~~~~~~g~~~i~l~~g~---~~~~--~p~~v~~a~~~~~~~~~~-~Y~~~~G~~~lr 138 (471)
.+++..++ ++.++..+. ...++.+.++|||+.|. ++-. ..+.|++|....+..+.. .|.|..|+++||
T Consensus 17 ~~~~~~~v~~~p~d~i~~l~---~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr 93 (420)
T 4h51_A 17 TAERWQKIQAQAPDVIFDLA---KRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFI 93 (420)
T ss_dssp HHHHHHTCCCCCCCHHHHHH---HHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHH
T ss_pred hhHHHhCCCCCCCChHHHHH---HHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHH
Confidence 34444444 455555544 44445556799999994 3322 347899998888776554 599999999999
Q ss_pred HHHHHHHHHHhCCCCCCCc--EEEeCChHHHHHHHHHHh----cCCCCeEEEcCCCCCChHHHHHHcCCE-EEEecCCCC
Q 012095 139 SAICHKLKEENGLSYTPDQ--ILVSNGAKQSILQAVLAV----CSPGDEVIIPAPFWVSYPEMARIADAT-PVILPTRIS 211 (471)
Q Consensus 139 ~~ia~~~~~~~g~~~~~~~--i~it~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~~ 211 (471)
+++++++. |.....++ .+.|.|++.++...+..+ ++|||+|++++|+|++|..+++.+|++ +..++...+
T Consensus 94 ~aia~~~~---g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~ 170 (420)
T 4h51_A 94 DEAVKIIY---GNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDP 170 (420)
T ss_dssp HHHHHHHH---C---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEG
T ss_pred HHHHHHhc---CCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccccc
Confidence 99999974 33333333 456889988877665544 579999999999999999999999997 455666555
Q ss_pred CCCcCCHHHHHhhhc---cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc--ccc
Q 012095 212 ENFLLDPKVLESKLT---EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS--FAS 286 (471)
Q Consensus 212 ~~~~ld~e~l~~~l~---~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~--~~~ 286 (471)
+++.+|.+.+.+.+. ++++++++++||||||.++++++|++|+++|+++ ++++|+||+|.+|.|++..... ...
T Consensus 171 ~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~~~~D~~Y~~~~~~~~~~~~~~~~~ 249 (420)
T 4h51_A 171 KTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK-HHQVFFDSAYQGYASGSLDTDAYAARL 249 (420)
T ss_dssp GGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred cccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-CceEeeehhhhhhccCCcccchHHHHh
Confidence 678899999888774 4667788899999999999999999999999999 9999999999999887532222 122
Q ss_pred CCCCCCceEEEecCCcccCccchhheeeEcCHHH-------HHHHHHHHhcccCCCChHHHHHHHHHHhccCCC---hHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-------VAACNKIQSQFTSGASSISQKAGVAALGLGYAG---GEV 356 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~-------i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~---~~~ 356 (471)
.....++++++.||||.|+|+|||+||++++.+. ...+....+...++++..+|.++..+|.+.... +..
T Consensus 250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~ 329 (420)
T 4h51_A 250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAE 329 (420)
T ss_dssp HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHH
Confidence 2233578999999999999999999999876443 334445566678889999999999999863221 244
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 357 VSKMVKAFRERRDFLVKSFGEL--EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~~--~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
++.++++|+++|+.+.+.|.++ ++ |.++.+++|||.|+.++ . +.++.| +++||+++||+
T Consensus 330 ~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls---------------~-e~v~~L-~e~~Vy~~~~g- 391 (420)
T 4h51_A 330 LSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS---------------K-AQCEYC-QNHNIFITVSG- 391 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC---------------H-HHHHHH-HHTTEECCTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC---------------H-HHHHHH-HhCCEEEcCCC-
Confidence 7788999999999999999886 22 55567889999987552 3 345655 56799999975
Q ss_pred CCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhCC
Q 012095 434 FGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 434 f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~~ 467 (471)
|||++. ++++|+.++++|.+++++...
T Consensus 392 -------Ris~Agl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 392 -------RANMAGLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp -------EEEGGGCCHHHHHHHHHHHHHHHC----
T ss_pred -------EEEeccCCHHHHHHHHHHHHHHHHHhhc
Confidence 999998 999999999999999987654
No 58
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=4e-48 Score=397.36 Aligned_cols=372 Identities=17% Similarity=0.150 Sum_probs=297.8
Q ss_pred ccccccccccCCChHHHHHHHHHHHHhcCC-CeEEcCCCCC-CCCCh----HHHHHHHHHHHH---cCCCCCCCCCCCHH
Q 012095 66 VSLSPRVNAVKPSKTVAITDQATALAQAGV-SVIRLAAGEP-DFDTP----VLIAEAGINAIR---EGFTRYTPNAGTLE 136 (471)
Q Consensus 66 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~-~~i~l~~g~~-~~~~p----~~v~~a~~~~~~---~~~~~Y~~~~G~~~ 136 (471)
+++..++...++.++..+... ++..+. .+|+|+.|.+ ++..+ +.+.+++.+... .+...|.+..|.++
T Consensus 22 ~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~ 98 (448)
T 3meb_A 22 MSVFSGFPASPPDAILNLTVL---YNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPL 98 (448)
T ss_dssp CCTTTTCCCCCCCTTHHHHHH---HHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHH
T ss_pred hhHHhcCCCCCCChHHHHHHH---HHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHH
Confidence 345567777777766665543 344444 4799999998 76543 556666554441 34678999999999
Q ss_pred HHHHHHHHHHHHhCCC---CCCCcEEE--eCChHHHHHH--HHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEE
Q 012095 137 LRSAICHKLKEENGLS---YTPDQILV--SNGAKQSILQ--AVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVI 205 (471)
Q Consensus 137 lr~~ia~~~~~~~g~~---~~~~~i~i--t~G~~~al~~--~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~ 205 (471)
+|+++++++ +|.+ +++++|++ |+|+++++.. .+..++.+||+|++++|+|.+|...++ ..|++++.
T Consensus 99 lr~~ia~~l---~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~ 175 (448)
T 3meb_A 99 FLEAAQFLM---FGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKE 175 (448)
T ss_dssp HHHHHHHHH---HCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEE
T ss_pred HHHHHHHHh---cCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEE
Confidence 999999998 3543 22689999 9999999987 456678899999999999999999999 99999999
Q ss_pred ecCCCCC-CCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC--
Q 012095 206 LPTRISE-NFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-- 279 (471)
Q Consensus 206 v~~~~~~-~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-- 279 (471)
+|+..++ +|.+|++++++++++ +++++++++||||||.+++.+++++|+++|++| ++++|+||+|.++.+++.
T Consensus 176 ~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~li~Deay~~~~~~~~~~ 254 (448)
T 3meb_A 176 YTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK-KHIAFFDSAYQGFATGSFEA 254 (448)
T ss_dssp ECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTSSSCHHH
T ss_pred EeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCCccc
Confidence 9984444 688999999999974 567778899999999999999999999999999 999999999999887651
Q ss_pred CccccccCCCCCCceEEEecCCcccCccchhheee--Ec--------C-H----HHHHHHHHHHhcccCCCChHHHHHHH
Q 012095 280 THTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYI--AG--------P-K----HFVAACNKIQSQFTSGASSISQKAGV 344 (471)
Q Consensus 280 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v--~~--------~-~----~~i~~l~~~~~~~~~~~~~~~q~aa~ 344 (471)
...++..+....+++++++||||.||++|+|+||+ ++ + + ++++.+....+....+++.++|.++.
T Consensus 255 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~ 334 (448)
T 3meb_A 255 DAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQ 334 (448)
T ss_dssp HTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHH
T ss_pred CchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHH
Confidence 11223322223578999999999999999999998 66 4 4 67777777777777789999999999
Q ss_pred HHHhccCCCh---HHHHHHHHHHHHHHHHHHHHhcCC--CC------CeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 345 AALGLGYAGG---EVVSKMVKAFRERRDFLVKSFGEL--EG------VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 345 ~~L~~~~~~~---~~~~~~~~~~~~~r~~l~~~L~~~--~g------~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
.+|....... +++++++++++++|+++.+.|+++ +| +.+..|+++||+|+.++
T Consensus 335 ~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---------------- 398 (448)
T 3meb_A 335 VIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLT---------------- 398 (448)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCC----------------
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCC----------------
Confidence 9997521111 447888999999999999999886 56 77778999999997653
Q ss_pred HHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhCC
Q 012095 414 ESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+++..|++++||++.||+ .|||++. ++++|++++++|+++++++..
T Consensus 399 ~~~~~~ll~~~gV~v~~G~-------gRis~a~~~~~~i~~~~~~l~~~l~~~~~ 446 (448)
T 3meb_A 399 PEHVDYLKEKWSIYLVKAG-------GRMSMCGLTESNCDYVAEAIHDAVTKLPF 446 (448)
T ss_dssp HHHHHHHHHHHCEEECSGG-------GEEEGGGCCTTTHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCEEEeCCC-------cEEEEecCCHHHHHHHHHHHHHHHHhccc
Confidence 3677778777899999986 2999998 888899999999999986553
No 59
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=5.3e-47 Score=376.49 Aligned_cols=336 Identities=18% Similarity=0.244 Sum_probs=291.9
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.|+++|+|+.|++++++|+.+.+++.+++.+ ..+| |..+..++|+++++++ | +++++|++|+|+++++..++
T Consensus 14 ~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~l~~~la~~~----~--~~~~~i~~~~g~~~a~~~~~ 85 (354)
T 3ly1_A 14 STDNPIRINFNENPLGMSPKAQAAARDAVVK-ANRY-AKNEILMLGNKLAAHH----Q--VEAPSILLTAGSSEGIRAAI 85 (354)
T ss_dssp CSSSCEECSSCCCSSCCCHHHHHHHHHTGGG-TTSC-CHHHHHHHHHHHHHHT----T--SCGGGEEEESHHHHHHHHHH
T ss_pred CCCceEEccCCCCCCCCCHHHHHHHHHHHhh-CcCC-CCCchHHHHHHHHHHh----C--CChHHEEEeCChHHHHHHHH
Confidence 4678999999999999999999999988764 5678 6678889999999986 3 46789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEEcCCCCCcccCCCHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLL 250 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i~~p~NPtG~~~~~~~l 250 (471)
++++++||+|+++.|+|.++...++..|++++.++++. ++.+|+++++++++ +++++|++++|+||||.+++.+++
T Consensus 86 ~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l 163 (354)
T 3ly1_A 86 EAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVI 163 (354)
T ss_dssp HHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHH
T ss_pred HHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHH
Confidence 99999999999999999999999999999999999864 47799999999998 789999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhc
Q 012095 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ 330 (471)
Q Consensus 251 ~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~ 330 (471)
++|+++| +| ++++|+||+|.++.+++.....+...+...+++++++||||.+|++|+|+||+++++++++.+......
T Consensus 164 ~~l~~~~-~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 241 (354)
T 3ly1_A 164 EPWIASK-PA-NTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG 241 (354)
T ss_dssp HHHHHTC-CT-TEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC
T ss_pred HHHHHhC-CC-CeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC
Confidence 9999999 88 999999999999887654322222222222789999999999999999999999999999998877655
Q ss_pred ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCC
Q 012095 331 FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 331 ~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
++++.+.|.++.++|+. .+++++.+++++++++++.+.|+++ |+.+.++. +.|+|++++.
T Consensus 242 --~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~-~~~~~~~~~~------------ 301 (354)
T 3ly1_A 242 --EKINFSGVDAALASMND----SAFITYSKKSNDVSRQILLKALEDL-KLPYLPSE-GNFVFHQLVV------------ 301 (354)
T ss_dssp --SCCCHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCC-SSEEEEECSS------------
T ss_pred --CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCeECCCC-ceEEEEECCC------------
Confidence 57899999999999985 5889999999999999999999988 88877555 5568999873
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
+..++.+.|.++ ||.+. |..++.++++||+++ +++++++++++|++++++
T Consensus 302 -~~~~~~~~l~~~-gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 -PLKDYQTHMADA-GVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -CHHHHHHHHHHT-TEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHC-CEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 577899988865 99998 876677899999988 778999999999999875
No 60
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=3.8e-47 Score=385.99 Aligned_cols=352 Identities=19% Similarity=0.311 Sum_probs=284.8
Q ss_pred CCCeEEcCCCCCCCCCh--HHHHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 94 GVSVIRLAAGEPDFDTP--VLIAEAGINAIREGF-----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p--~~v~~a~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
++++|+|+.|.|+..++ +.+.+++.+.+.+.. .+|++..|..+||+++++++.+.+|+++++++|++|+|+++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~ 109 (417)
T 3g7q_A 30 TPGAIMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQS 109 (417)
T ss_dssp --CCEECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred CCCceEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHH
Confidence 46799999999988553 567788877765432 47999999999999999999999999899999999999999
Q ss_pred HHHHHHHHhcCCCC-----eEEEc-CCCCCChHHHHHH------cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE
Q 012095 167 SILQAVLAVCSPGD-----EVIIP-APFWVSYPEMARI------ADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 167 al~~~~~~l~~~gd-----~Vlv~-~p~y~~~~~~~~~------~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i 234 (471)
++..++++++++|| .|+++ +|+|+.|...+.. .+..+..++.+. .+|.+|+++++ +++++++|++
T Consensus 110 al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~--~~~~~~~v~~ 186 (417)
T 3g7q_A 110 AFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQ-FKYHVDFEHLH--IGEETGMICV 186 (417)
T ss_dssp HHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGE-EEEECCGGGCC--CCTTEEEEEE
T ss_pred HHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcc-cccccCHHHhc--cccCceEEEE
Confidence 99999999999987 89997 9999988866532 233444554321 24678999998 6778999999
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-CCCCCceEEEecCCcccCccchhhee
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
++||||||.+++.+++++|+++|++| +++||+||+|..+..+ . .+... +...++++++.|||| ++++|+|+||
T Consensus 187 ~~p~NptG~~~~~~~~~~l~~~a~~~-~~~li~De~~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~ 260 (417)
T 3g7q_A 187 SRPTNPTGNVITDEELMKLDRLANQH-NIPLVIDNAYGVPFPG-I---IFSEARPLWNPNIILCMSLSK-LGLPGSRCGI 260 (417)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTCTTTTC-C---BCSCCCCCCCTTEEEEEESGG-GTCTTSCCEE
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEeCCCcccccc-c---cccccccCCCCCEEEEEechh-ccCCCcceEE
Confidence 99999999999999999999999999 9999999999863211 1 11111 123578999999999 5789999999
Q ss_pred eEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH-HHHHHHHHHHHHHHHhcC-CC--CCeeeCCCcc
Q 012095 314 IAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGA 389 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~-~~--g~~~~~p~~g 389 (471)
+++++++++.+......++++++++.|.++.++++.... ..++.+ +++.|+++++.+.+.|.+ ++ |+.+..|++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g 339 (417)
T 3g7q_A 261 IIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDL-LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGA 339 (417)
T ss_dssp EECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCH-HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBS
T ss_pred EEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcch-HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcc
Confidence 999999999999988888888999999999999986432 344444 778899999999888876 55 4788889999
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---------CCcEEEEeecCHHHHHHHHHHHHH
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---------DTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---------~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
+|+|++++... .+..++++.|.+ +||.+.||+.|+. ++++||+++.+++++++++++|++
T Consensus 340 ~~~~~~~~~~~----------~~~~~l~~~l~~-~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 408 (417)
T 3g7q_A 340 IFLWLWFKDLP----------ITTELLYQRLKA-RGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAE 408 (417)
T ss_dssp SEEEEECTTCS----------SCHHHHHHHHHH-TTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCC----------CCHHHHHHHHHH-CCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 99999998520 267889998865 5999999998864 468999999999999999999999
Q ss_pred HHHhhC
Q 012095 461 GLLTLR 466 (471)
Q Consensus 461 ~l~~~~ 466 (471)
+++++.
T Consensus 409 ~l~~~~ 414 (417)
T 3g7q_A 409 EIERAW 414 (417)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998753
No 61
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=3e-51 Score=413.34 Aligned_cols=352 Identities=24% Similarity=0.375 Sum_probs=307.4
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+.|++++++|+.+.+++.+++..+..+|++. ..++|+++++++.+.+|+++++++|++|+|+++++..+++++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAF 109 (392)
Confidence 799999999999999999999999887666778654 889999999999988887778899999999999999999999
Q ss_pred cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCC-CCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRIS-ENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~-~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+++||+|+++.|+|.++...++..|++++.++++.+ ++|.+|+++++++++ +++++|++++|+||||.+++.+++++|
T Consensus 110 ~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l 189 (392)
T 3b1d_A 110 TKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQI 189 (392)
Confidence 999999999999999999999999999999998533 357899999999987 678999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC-CCceEEEecCCcccCccchhheeeEcCH-HHHHHHHHHHhcc
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM-WERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACNKIQSQF 331 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l~~~~~~~ 331 (471)
+++|++| +++||+||+|.++.+++....++..+... .+++++++||||.+|++|+|+||+++++ ++++.+......+
T Consensus 190 ~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 268 (392)
T 3b1d_A 190 GHLCQKH-HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN 268 (392)
Confidence 9999999 99999999999998876555555555432 5789999999999999999999999875 5999888876665
Q ss_pred c-CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCcceEEeEecCCccCCcccCCCC
Q 012095 332 T-SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK 409 (471)
Q Consensus 332 ~-~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~ 409 (471)
+ .++++++|.++.++|+. ..++++++++.++++++.+.+.|++ ++|+.+..|.++|++|++++.. +
T Consensus 269 ~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~-------- 336 (392)
T 3b1d_A 269 NHHEVSSLGYIATETAYRY---GKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDY-G-------- 336 (392)
Confidence 4 35789999999999875 3578899999999999999999998 7889988999999999998742 0
Q ss_pred CCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 410 IENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 410 ~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
.+..+++++|++++||.+.||..|+. ++++||+++.++++|++++++|+++++
T Consensus 337 -~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 337 -LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 14667888887666999999999873 579999999988999999999998875
No 62
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=9.3e-47 Score=375.69 Aligned_cols=323 Identities=21% Similarity=0.339 Sum_probs=273.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|+|+.|++++++|+.+ + + ....+|++ .+..+||+++++++ | +++++|++|+|+++++..++++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v--a----~-~~~~~Y~~-~~~~~lr~~la~~~----~--~~~~~v~~~~G~~~ai~~~~~~ 94 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL--T----Q-QTLNRYPE-CQPKAVIENYAQYA----G--VKPEQVLVSRGADEGIELLIRA 94 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC--C----C-CCTTSCCC-SSCHHHHHHHHHHH----T--SCGGGEEEESHHHHHHHHHHHH
T ss_pred CceEEeeCCCCCCCCCHhH--h----h-hhhccCCC-ccHHHHHHHHHHHh----C--CChHHEEEcCCHHHHHHHHHHH
Confidence 3589999999999887766 1 2 34578854 56899999999997 3 4678999999999999999999
Q ss_pred hcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 175 VCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 175 l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
++++| |+|++++|+|++|...++..|++++.+|++ ++|.+|+++++++++ ++++|++++||||||.+++.+++++|
T Consensus 95 ~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l 171 (356)
T 1fg7_A 95 FCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTL 171 (356)
T ss_dssp HCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 99999 999999999999999999999999999986 457799999999988 89999999999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccC
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTS 333 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~ 333 (471)
+++|+ + +++||+||+|.++.. ..++..+....+++++++||||.||++|+|+||+++++++++.+......+
T Consensus 172 ~~~~~-~-~~~li~De~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~-- 243 (356)
T 1fg7_A 172 LELTR-G-KAIVVADEAYIEFCP----QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPY-- 243 (356)
T ss_dssp HHHHT-T-TCEEEEECTTGGGSG----GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCSS--
T ss_pred HHhCC-C-CCEEEEEccchhhcC----CCcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCCC--
Confidence 99999 8 999999999998652 123334433457899999999999999999999999999999998876544
Q ss_pred CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCH
Q 012095 334 GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENS 413 (471)
Q Consensus 334 ~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 413 (471)
++++++|.++.++|++.. .+|+++.+++++++++++.+.|++++++....|.+++|+|++++ +.
T Consensus 244 ~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--------------~~ 307 (356)
T 1fg7_A 244 PLSTPVADIAAQALSPQG--IVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--------------AS 307 (356)
T ss_dssp CSCHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--------------TH
T ss_pred CCCHHHHHHHHHHhcCcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--------------CH
Confidence 689999999999987410 13488999999999999999999886543445667888999986 46
Q ss_pred HHHHHHHHHcCCEEEEC-CCCCCCCCcEEEEeecCHHHHHHHHHHHHH
Q 012095 414 ESLCRYLLDKAQVALVP-GDAFGDDTCIRISYAASLTTLQAAVERIKK 460 (471)
Q Consensus 414 ~~l~~~Ll~~~gV~v~p-g~~f~~~~~iRis~~~~~e~i~~~~~~l~~ 460 (471)
.++.++|.+ +||.+.| |..|+.++++|++++ +++++++++++|++
T Consensus 308 ~~l~~~L~~-~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~ 353 (356)
T 1fg7_A 308 SAVFKSLWD-QGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRA 353 (356)
T ss_dssp HHHHHHHHH-TTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-CCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHh
Confidence 788998854 5999999 988887789999998 46889999888765
No 63
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2e-47 Score=387.71 Aligned_cols=371 Identities=16% Similarity=0.148 Sum_probs=301.8
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC-C----CCChHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-D----FDTPVLIAEAGINAIRE--GFTRYTPNAGTLELRSA 140 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~-~----~~~p~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ 140 (471)
+++++..++++++..+...+.+ ..|+++|+|+.|.+ + ..+++.+.+++.+.+.+ ...+|++..|..+||++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 82 (412)
T 1ajs_A 5 VFAEVPQAQPVLVFKLIADFRE--DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTC 82 (412)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHT--CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred hhhhCcccCCchHHHHHHHHhh--cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHH
Confidence 4567788888888887766553 24678999999995 3 23468899999888732 45679899999999999
Q ss_pred HHHHHHHHhCCCCCCCcEEE--eCChHHHHHHHHH--HhcCCC-----CeEEEcCCCCCChHHHHHHcCCE-EEEecCCC
Q 012095 141 ICHKLKEENGLSYTPDQILV--SNGAKQSILQAVL--AVCSPG-----DEVIIPAPFWVSYPEMARIADAT-PVILPTRI 210 (471)
Q Consensus 141 ia~~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~--~l~~~g-----d~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~ 210 (471)
+++++...+|..+++++|++ |+|+++++..+++ .++++| |+|++++|+|++|...++..|++ ++.++++.
T Consensus 83 la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 162 (412)
T 1ajs_A 83 ASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWD 162 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEE
T ss_pred HHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeec
Confidence 99999766665557889999 9999999998854 456899 99999999999999999999999 99999865
Q ss_pred CCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC--CCccccc
Q 012095 211 SENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFA 285 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~--~~~~~~~ 285 (471)
+++|.+|++++++++++ +++++++++||||||.+++.+++++|+++|++| |++||+||+|.++.+++ ....++.
T Consensus 163 ~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~ 241 (412)
T 1ajs_A 163 TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR-FLFPFFDSAYQGFASGNLEKDAWAIR 241 (412)
T ss_dssp TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred CCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcccccccCCcccccchHHH
Confidence 56788999999999865 567788899999999999999999999999999 99999999999988764 1222333
Q ss_pred cCCCCCCceEEEecCCcccCccchhheeeEc---CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCC---ChH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GGE 355 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~---~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---~~~ 355 (471)
.+....++++++.||||.+|++|+|+||+++ +++ +++.+.........+++.++|.++.++|+.... ..+
T Consensus 242 ~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1ajs_A 242 YFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG 321 (412)
T ss_dssp HHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHH
Confidence 3332357899999999999988999999999 887 455555544444555799999999999986210 034
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 356 VVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 356 ~~~~~~~~~~~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
++++++++++++++++.+.|+++. ++++..|.+++|+|+++ + .+++..+++++||.+.|+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~~l~~~gv~v~~~- 384 (412)
T 1ajs_A 322 NVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGL---------------N-PKQVEYLINQKHIYLLPS- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCC---------------C-HHHHHHHHHTTCEECCTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCC---------------C-HHHHHHHHHhCCEEecCC-
Confidence 788999999999999999999873 48887889999999755 2 345666777779999984
Q ss_pred CCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 433 AFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 433 ~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
+|++++. +++++++++++|+++++++
T Consensus 385 -------~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 -------GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp -------SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred -------cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 5999996 8899999999999998764
No 64
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=9.2e-47 Score=386.65 Aligned_cols=382 Identities=16% Similarity=0.240 Sum_probs=304.5
Q ss_pred cccccccccC-CChHHHHHHHHHHHHhcCCCeE-EcCCCCCCCCCh--HHHHHHHHHHHHc-------C-----CCCCCC
Q 012095 67 SLSPRVNAVK-PSKTVAITDQATALAQAGVSVI-RLAAGEPDFDTP--VLIAEAGINAIRE-------G-----FTRYTP 130 (471)
Q Consensus 67 ~~s~~~~~~~-~~~~~~~~~~~~~~~~~g~~~i-~l~~g~~~~~~p--~~v~~a~~~~~~~-------~-----~~~Y~~ 130 (471)
.+|+....+. ++.+..++....+.. ..+++| +|+.|.|+.+++ +.+.+++.+.+.+ . ..+|++
T Consensus 3 ~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 81 (444)
T 3if2_A 3 KFSKFGQKFTQPTGISQLMDDLGDAL-KSDQPVNMLGGGNPAKIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSN 81 (444)
T ss_dssp CCCHHHHHHHSCCHHHHHHHHHHHHH-HSSSCCEECSCCCCCCCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCC
T ss_pred CcchhhhhccCchhHHHHHHHHHhhh-cCchhhhccCCCCCCcccchHHHHHHHHHHHHhccccccccchhhhhhhccCC
Confidence 3455444443 455655554443332 236799 999999988543 5567777776654 2 257999
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--------------eEEEc-CCCCCChHHH
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--------------EVIIP-APFWVSYPEM 195 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd--------------~Vlv~-~p~y~~~~~~ 195 (471)
..|..+||+++++++.+.+|+.+++++|++|+|+++++..++++++++|| +|+++ +|+|+.|...
T Consensus 82 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~ 161 (444)
T 3if2_A 82 PQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDV 161 (444)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTC
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhc
Confidence 99999999999999999999989999999999999999999999999998 78876 9999998763
Q ss_pred ------HHHcCCEEEEecCCCCC---CCcCCHHHHHhh---hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 196 ------ARIADATPVILPTRISE---NFLLDPKVLESK---LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 196 ------~~~~G~~~~~v~~~~~~---~~~ld~e~l~~~---l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
+...|..++.++++.++ +|.+|+++|+++ +++++++|++++||||||.+++.+++++|+++|++| ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~-~~ 240 (444)
T 3if2_A 162 HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRY-DI 240 (444)
T ss_dssp CSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TC
T ss_pred ccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHC-CC
Confidence 35568888888876422 367999999998 677899999999999999999999999999999999 99
Q ss_pred EEEEccCCCccccCCCCccccccC-CCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHH
Q 012095 264 LVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKA 342 (471)
Q Consensus 264 ~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~a 342 (471)
+||+||+|..+... . .+... ....++++++.||||. +++|+|+||+++++++++.+.......+++++++.|.+
T Consensus 241 ~li~De~~~~~~~~-~---~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a 315 (444)
T 3if2_A 241 PLIIDNAYGMPFPN-I---IYSDAHLNWDNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAI 315 (444)
T ss_dssp CEEEECTTCTTTTC-C---BCSCCCCCCCTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHH
T ss_pred EEEEECCCCCcccc-c---ccccccccCCCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHHHHhccCCCChHHHHH
Confidence 99999999863211 1 11111 1235789999999997 78999999999999999999988887788899999999
Q ss_pred HHHHHhccCCChHHHHH-HHHHHHHHHHHHHHHhcC-CC--CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHH
Q 012095 343 GVAALGLGYAGGEVVSK-MVKAFRERRDFLVKSFGE-LE--GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCR 418 (471)
Q Consensus 343 a~~~L~~~~~~~~~~~~-~~~~~~~~r~~l~~~L~~-~~--g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (471)
+..++..... ..+..+ +++.|+++++.+.+.|.+ ++ ++.+..|.+++|+|++++... .+..++++
T Consensus 316 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~----------~~~~~l~~ 384 (444)
T 3if2_A 316 ATPLVANDRI-KQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLP----------ISTLDLYE 384 (444)
T ss_dssp HHHHHHTSHH-HHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCS----------SCHHHHHH
T ss_pred HHHHHHcCch-hHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCC----------CCHHHHHH
Confidence 9999986322 233444 777889999988888766 44 467778899999999998520 26788998
Q ss_pred HHHHcCCEEEECCCCCCCC----------CcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 419 YLLDKAQVALVPGDAFGDD----------TCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 419 ~Ll~~~gV~v~pg~~f~~~----------~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.|.+ +||.+.||+.|... ++|||+++.++++|++++++|.++++++..
T Consensus 385 ~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 385 RLKA-KGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp HHHH-TTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHH-CCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHc
Confidence 8765 59999999988532 589999999999999999999999987654
No 65
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-47 Score=391.86 Aligned_cols=347 Identities=14% Similarity=0.164 Sum_probs=289.4
Q ss_pred CCeEEcCCCCCCCCCh---HHHHHHH--HHHHHc---CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 95 VSVIRLAAGEPDFDTP---VLIAEAG--INAIRE---GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p---~~v~~a~--~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
..+|+|+.|.|+.... +.+.+++ .+++.+ ...+|++..|..+||++|++++ + +++++|++|+|+++
T Consensus 33 ~~~i~~~~G~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~----~--~~~~~i~~t~G~~~ 106 (427)
T 3ppl_A 33 NLKLDLTRGKPSSEQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL----G--VPVEQVLAGDASSL 106 (427)
T ss_dssp CCCEECCCCSCCHHHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH----T--SCGGGEEECSSCHH
T ss_pred CceEecCCCCCChHHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh----C--CCcceEEEeCCcHH
Confidence 4589999999986542 2466665 444433 2478988899999999999998 3 57899999999999
Q ss_pred HH--HHHHHHhcC--C----------CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcE
Q 012095 167 SI--LQAVLAVCS--P----------GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRL 231 (471)
Q Consensus 167 al--~~~~~~l~~--~----------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~ 231 (471)
++ ..+++++++ | ||+|++++|+|..|...++..|++++.+|++.+ ++|+++|+++++ +++++
T Consensus 107 al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~ 183 (427)
T 3ppl_A 107 NIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQVKG 183 (427)
T ss_dssp HHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTEEE
T ss_pred HHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCCeE
Confidence 99 478888877 6 899999999999999999999999999999753 389999999994 67888
Q ss_pred EEE-cCCCCCcccCCCHHHHHHHHHHH-HhCCCeEEEEccCCCccccCCCCc--cccccC---CCCCCceEEEecCCccc
Q 012095 232 LIL-CSPSNPTGSVYPKNLLDEIARIV-AKHPRLLVLSDEIYEHIIYAPATH--TSFASL---PGMWERTLTVNGFSKAF 304 (471)
Q Consensus 232 i~i-~~p~NPtG~~~~~~~l~~i~~l~-~~~~~~~ii~De~y~~~~~~~~~~--~~~~~~---~~~~~~~i~~~S~SK~~ 304 (471)
|++ ++||||||.+++.+++++|+++| ++| +++||+||+|.++.|++... .++..+ .+..+++++++||||.
T Consensus 184 v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~- 261 (427)
T 3ppl_A 184 MWVVPVFSNPTGFTVTEDVAKRLSAMETAAP-DFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI- 261 (427)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT-
T ss_pred EEECCCCCCCCCccCCHHHHHHHHHHHhhcC-CCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc-
Confidence 885 48899999999999999999999 999 99999999999988875432 233333 1236899999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC----CCC
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE----LEG 380 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g 380 (471)
+++|+|+||+++++++++.+........++++++.|.++..+|.......+++.+.++.|+++++.+.+.|.+ +++
T Consensus 262 ~~~G~r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~ 341 (427)
T 3ppl_A 262 TLAGAGVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGV 341 (427)
T ss_dssp SCTTSSCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred cCcCccEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 5799999999999999999998888788889999999999999751111467888999999999998888765 335
Q ss_pred CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCCC-----CCCcEEEEeec-CHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAFG-----DDTCIRISYAA-SLTTLQA 453 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p-g~~f~-----~~~~iRis~~~-~~e~i~~ 453 (471)
+.+..|++|+|+|++++.. +..++.+.|.+ +||.+.| |..|+ .++++||+++. +++++++
T Consensus 342 ~~~~~p~~g~~~~~~~~~~------------~~~~~~~~l~~-~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~ 408 (427)
T 3ppl_A 342 AQWTVPAGGYFISLDVVPG------------TASRVAELAKE-AGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEV 408 (427)
T ss_dssp CEECCCSBSSCEEEECSTT------------CHHHHHHHHHH-TTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHH
T ss_pred eEEeCCCccEEEEEECCcc------------hHHHHHHHHHH-CCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHH
Confidence 7888899999999999853 57788877665 5999999 55554 35799999998 8999999
Q ss_pred HHHHHHHHHHhh
Q 012095 454 AVERIKKGLLTL 465 (471)
Q Consensus 454 ~~~~l~~~l~~~ 465 (471)
++++|.++++++
T Consensus 409 ~~~~l~~~l~~~ 420 (427)
T 3ppl_A 409 AMDGVATCVLLA 420 (427)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998765
No 66
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=3.3e-47 Score=386.17 Aligned_cols=370 Identities=15% Similarity=0.125 Sum_probs=296.9
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC-CC----CChHHHHHHHHH-HHHcC-CCCCCCCCCCHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP-DF----DTPVLIAEAGIN-AIREG-FTRYTPNAGTLELRSA 140 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~-~~----~~p~~v~~a~~~-~~~~~-~~~Y~~~~G~~~lr~~ 140 (471)
+++++..++++++..+...+.. ..|+++|+|+.|.+ ++ .+++.+.+++.+ ++..+ ..+|++..|..++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 4 LFNNIELLPPDALFGIKQRYGQ--DQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTTTCCCCCCCTTHHHHHHHHT--CCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred hhccCcccCCCcHHHHHHHHhc--CCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 4567788888877776654432 24678999999996 33 356889999988 76533 4579889999999999
Q ss_pred HHHHHHHHhCCCCCCCcEEE--eCChHHHHHHHH--HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcC
Q 012095 141 ICHKLKEENGLSYTPDQILV--SNGAKQSILQAV--LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLL 216 (471)
Q Consensus 141 ia~~~~~~~g~~~~~~~i~i--t~G~~~al~~~~--~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~l 216 (471)
+++++...+|.++++++|++ |+|+++++..++ ..++.+||+|++++|+|.+|...++..|++++.+++..++++.+
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence 99999766676567899999 999999999873 34457999999999999999999999999999999832346789
Q ss_pred CHHHHHhhhccC--CcEEE-EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC--CCccccccCCCCC
Q 012095 217 DPKVLESKLTEK--SRLLI-LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP--ATHTSFASLPGMW 291 (471)
Q Consensus 217 d~e~l~~~l~~~--~~~i~-i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~ 291 (471)
|+++++++++++ .++++ +++||||||.+++.+++++|+++|++| +++||+||+|.++.+++ ....++..+....
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 240 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASK-NHIALFDTAYQGFATGDLDKDAYAVRLGVEKL 240 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCcccchhHHHHHHHhcC
Confidence 999999998653 34454 599999999999999999999999999 99999999999988764 1122332322122
Q ss_pred C---ceEEEecCCcccCccchhheeeE--c-----CHH----HHHHHHHHHhcccCCCChHHHHHHHHHHhccCC---Ch
Q 012095 292 E---RTLTVNGFSKAFAMTGWRLGYIA--G-----PKH----FVAACNKIQSQFTSGASSISQKAGVAALGLGYA---GG 354 (471)
Q Consensus 292 ~---~~i~~~S~SK~~g~~G~R~G~v~--~-----~~~----~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---~~ 354 (471)
+ ++++++||||.+|++|+|+||++ + +++ +++.+.........+++.+.|.++.++|+.... ..
T Consensus 241 ~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 320 (412)
T 1yaa_A 241 STVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp TTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred CCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHH
Confidence 4 89999999999998899999998 7 666 888887755555566799999999999986210 02
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012095 355 EVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 431 (471)
Q Consensus 355 ~~~~~~~~~~~~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg 431 (471)
+++++++++++++++++.+.|++++ ++++..|++|+|+|+.+ +...+ ..+++++||.+.|
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~l~~~gi~v~~- 383 (412)
T 1yaa_A 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGL---------------TPQMV-KRLEETHAVYLVA- 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCC---------------CHHHH-HHHHHHHCEECCT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCC---------------CHHHH-HHHHHhCCEEecc-
Confidence 5789999999999999999999873 48888899999999754 33445 6667666999987
Q ss_pred CCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHh
Q 012095 432 DAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 432 ~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~ 464 (471)
++||+++. +++++++++++|+++++.
T Consensus 384 -------~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 -------SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp -------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred -------CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 47999997 889999999999998875
No 67
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=3.4e-47 Score=387.41 Aligned_cols=347 Identities=15% Similarity=0.196 Sum_probs=289.3
Q ss_pred CCeEEcCCCCCC---CCChHHHHHHHH--HHHHcC--CCCC-CCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 95 VSVIRLAAGEPD---FDTPVLIAEAGI--NAIREG--FTRY-TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 95 ~~~i~l~~g~~~---~~~p~~v~~a~~--~~~~~~--~~~Y-~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
...|+|+.|.|+ +++|+.+.+++. +++..+ ..+| ++..|..+||+++++++ + +++++|++|+|+++
T Consensus 25 ~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~----~--~~~~~i~~t~G~~~ 98 (423)
T 3ez1_A 25 GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL----D--VKAENVLVWNNSSL 98 (423)
T ss_dssp TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT----T--SCGGGEEECSSCHH
T ss_pred CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh----C--CChhhEEEeCCcHH
Confidence 358999999999 777878888875 444332 3789 88899999999999997 3 57889999999999
Q ss_pred HHH--HHHHHhcC--C---------CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh--ccCCcE
Q 012095 167 SIL--QAVLAVCS--P---------GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRL 231 (471)
Q Consensus 167 al~--~~~~~l~~--~---------gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l--~~~~~~ 231 (471)
++. .+++++++ | ||+|++++|+|..|...++..|++++.+|++.+ ++|+++|++++ ++++++
T Consensus 99 al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~~ 175 (423)
T 3ez1_A 99 ELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSVKG 175 (423)
T ss_dssp HHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTEEE
T ss_pred HHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCceE
Confidence 997 88888888 8 599999999999999999999999999998753 38999999999 568898
Q ss_pred EEE-cCCCCCcccCCCHHHHHHHHHHH-HhCCCeEEEEccCCCccccCC-C--CccccccC---CCCCCceEEEecCCcc
Q 012095 232 LIL-CSPSNPTGSVYPKNLLDEIARIV-AKHPRLLVLSDEIYEHIIYAP-A--THTSFASL---PGMWERTLTVNGFSKA 303 (471)
Q Consensus 232 i~i-~~p~NPtG~~~~~~~l~~i~~l~-~~~~~~~ii~De~y~~~~~~~-~--~~~~~~~~---~~~~~~~i~~~S~SK~ 303 (471)
|++ ++||||||.+++.+++++|+++| ++| +++||+||+|..+.|.+ . ...++..+ ....+++++++||||.
T Consensus 176 v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~ 254 (423)
T 3ez1_A 176 ILFVPTYSNPGGETISLEKARRLAGLQAAAP-DFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKI 254 (423)
T ss_dssp EEECSSSCTTTCCCCCHHHHHHHHTCCCSST-TCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTT
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHhcc-CCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhh
Confidence 875 68999999999999999999999 999 99999999999766544 2 22233332 1235899999999999
Q ss_pred cCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHHHHHHHhcC----
Q 012095 304 FAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGL--GYAGGEVVSKMVKAFRERRDFLVKSFGE---- 377 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~--~~~~~~~~~~~~~~~~~~r~~l~~~L~~---- 377 (471)
+++|+|+||+++++++++.+........++++.+.|.++..+|.. .. ..+++++.++.|+++++.+.+.|.+
T Consensus 255 -~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 332 (423)
T 3ez1_A 255 -TFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGG-LEGLMRDHAAIIAPKFRAVDEVLRAELGE 332 (423)
T ss_dssp -SCSSSSCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -ccCCcceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 579999999999999999999988888888999999999999985 22 2467888888888888887777654
Q ss_pred CC-CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-CCCCC-----CCCcEEEEeec-CHH
Q 012095 378 LE-GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP-GDAFG-----DDTCIRISYAA-SLT 449 (471)
Q Consensus 378 ~~-g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p-g~~f~-----~~~~iRis~~~-~~e 449 (471)
++ ++.+..|++|+|+|++++.. +..++.+.|.+ +||.+.| |..|+ .++++||+++. +++
T Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~------------~~~~~~~~l~~-~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~ 399 (423)
T 3ez1_A 333 GGEYATWTLPKGGYFISLDTAEP------------VADRVVKLAEA-AGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVE 399 (423)
T ss_dssp TTSSEEECCCSBSSCEEEEESSS------------CHHHHHHHHHH-TTEECCCTTTTSSTTCCSSSCEEEECCSSSCHH
T ss_pred CCCceEEeCCCccEEEEEECCCC------------cHHHHHHHHHH-CCcEEecCcccccCCCCCCCCeEEEEcCCCCHH
Confidence 43 37788899999999999753 56677776654 5999999 66665 25799999987 999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 012095 450 TLQAAVERIKKGLLTLR 466 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~~~ 466 (471)
++++++++|+++++++.
T Consensus 400 ~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 400 EVRTAMQVVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987653
No 68
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-45 Score=365.12 Aligned_cols=332 Identities=17% Similarity=0.252 Sum_probs=283.2
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.|+++|+|+.|++++++|+.+.+++.+++.. ..+| +..+..++|+++++++ | +++++|++|+|+++++..++
T Consensus 24 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~l~~~la~~~----~--~~~~~i~~~~g~t~al~~~~ 95 (361)
T 3ftb_A 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKN-LGVY-PDVNYRRLNKSIENYL----K--LKDIGIVLGNGASEIIELSI 95 (361)
T ss_dssp ----CEETTCCCCTTCSCHHHHTTHHHHHHG-GGSC-CCTTCHHHHHHHHHHH----T--CCSCEEEEESSHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCCCCHHHHHHHHHHHHH-hcCC-CCccHHHHHHHHHHHh----C--CCcceEEEcCCHHHHHHHHH
Confidence 5678999999999999999999999998876 4677 6688999999999997 3 57889999999999999988
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++ |+|+++.|+|.++...++..|++++.++++.+++ ++++++++++++ +++|++++||||||.+++.+++++
T Consensus 96 ~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~ 168 (361)
T 3ftb_A 96 SLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIH 168 (361)
T ss_dssp TTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHH
T ss_pred HHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHH
Confidence 877 8999999999999999999999999999986544 677999999988 999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE-cCHHHHHHHHHHHhcc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQF 331 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~~i~~l~~~~~~~ 331 (471)
|+++|++| |+++|+||+|.++.++ ...+........+++++++||||.+|++|+|+||++ +++++++.+.....
T Consensus 169 i~~~~~~~-~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~-- 243 (361)
T 3ftb_A 169 VLKLAEEK-KKTIIIDEAFIEFTGD--PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQN-- 243 (361)
T ss_dssp HHHHHHHH-TCEEEEECSSGGGTCC--TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSC--
T ss_pred HHHHhhhc-CCEEEEECcchhhcCC--cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCC--
Confidence 99999999 9999999999998876 223334444446889999999999999999999998 89999999887654
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceEEeEecCCccCCcccCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFYLFIDFSTYYGSEAEGFGKI 410 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~ 410 (471)
.+++++++|.++.++|+. .+++++.+++++++++++.+.|++++|+. +.++.++ |+|++++..
T Consensus 244 ~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~----------- 307 (361)
T 3ftb_A 244 PWNINCFAEMAAINCLKD----TNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPHAN-FVLCRLENI----------- 307 (361)
T ss_dssp TTCSCHHHHHHHHHTSSC----HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCSSS-EEEEEESSS-----------
T ss_pred CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCCCe-EEEEEcCCC-----------
Confidence 346899999999999874 68899999999999999999999998898 6666655 578888752
Q ss_pred CCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 411 ENSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 411 ~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++.+.|.++ ||.+.||..|+. ++++|++++ +.++++++++.|+++.+
T Consensus 308 -~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 308 -SGEKLYDSLLKE-DIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -CHHHHHHHHHTT-TEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHC-CeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 678999998876 999999999874 579999998 55566666666666554
No 69
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.4e-45 Score=368.14 Aligned_cols=337 Identities=19% Similarity=0.275 Sum_probs=281.1
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.|+++|+|+.|++++++|+.+.+++.+++.. ..+| +..|..++|+++++++ | +++++|++|+|+++++..++
T Consensus 22 ~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~l~~~la~~~----~--~~~~~v~~~~g~~~al~~~~ 93 (364)
T 1lc5_A 22 SPDQLLDFSANINPLGMPVSVKRALIDNLDC-IERY-PDADYFHLHQALARHH----Q--VPASWILAGNGETESIFTVA 93 (364)
T ss_dssp CGGGSEECSSCCCTTCCCHHHHHHHHHTGGG-GGSC-CCTTCHHHHHHHHHHH----T--SCGGGEEEESSHHHHHHHHH
T ss_pred CccceEEeccccCCCCCCHHHHHHHHHHHHH-hhcC-CCCCHHHHHHHHHHHH----C--cCHHHEEECCCHHHHHHHHH
Confidence 4567999999998888889999999887754 4678 4468999999999997 3 46789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++ +||+|+++.|+|.++...++..|++++.+|++.++++.+ ++++.+.+++++++|++++||||||.+++.+++++
T Consensus 94 ~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 170 (364)
T 1lc5_A 94 SGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQA 170 (364)
T ss_dssp HHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 988 789999999999999999999999999999875445554 57677777778999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE-cCHHHHHHHHHHHhcc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKHFVAACNKIQSQF 331 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~~i~~l~~~~~~~ 331 (471)
|+++|++| +++||+||+|.++.+++. ++.......++++++.||||.+|++|+|+||++ +++++++.+.....
T Consensus 171 i~~~~~~~-~~~li~De~~~~~~~~~~---~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-- 244 (364)
T 1lc5_A 171 IADRCKSL-NINLILDEAFIDFIPHET---GFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM-- 244 (364)
T ss_dssp HHHHHHHH-TCEEEEECTTGGGSTTCC---CSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC--
T ss_pred HHHHhhhc-CcEEEEECcChhhccCcc---chhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC--
Confidence 99999999 999999999998876532 222322335789999999999999999999999 99999999887654
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
.++++.++|.++.++|+. .+++++.++.++++++++.+.|++++|+.+.++. |+|+|++++.
T Consensus 245 ~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-g~~~~~~~~~------------- 306 (364)
T 1lc5_A 245 PWSVNALAALAGEVALQD----SAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCER------------- 306 (364)
T ss_dssp TTCSCHHHHHHHHHGGGC----HHHHHHHHHHHHHHHHHHHHHHHTSTTEEECCCS-SSEEEEEESC-------------
T ss_pred CCCCCHHHHHHHHHHHhC----cHHHHHHHHHHHHHHHHHHHHHhcCCCCEECCCC-CeEEEEECCC-------------
Confidence 456899999999999885 5789999999999999999999998888887555 5567888863
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+..++.+.|+++ ||.+.||..|+. ++++|++++. .++++++++.|+++++++.
T Consensus 307 ~~~~l~~~l~~~-gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 307 EDIDLQRRLLTQ-RILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp TTCCHHHHHHTT-TEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC----
T ss_pred cHHHHHHHHHHC-CcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhccc
Confidence 234688888765 999999998853 5799999874 6778888888888877654
No 70
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=7.2e-47 Score=395.62 Aligned_cols=357 Identities=22% Similarity=0.293 Sum_probs=290.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHHH-hC-CCCC-CCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEE-NG-LSYT-PDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~-~g-~~~~-~~~i~it~G~~~al~~~ 171 (471)
++|+|+.|.++++ |+.+++++.+++.. .+|+ +..|..++|+++++++.+. .+ +++. +++|++|+|+++++..+
T Consensus 104 ~~i~l~~g~~~~~-~~~~v~a~~~~~~~--~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~ 180 (533)
T 3f6t_A 104 DAVNYCHTELGLN-RDKVVAEWVNGAVA--NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYA 180 (533)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHH
T ss_pred hheeccCCCCCcC-CcHHHHHHHHHHHh--CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHH
Confidence 3789999999986 55666666666554 3454 7889999999999999766 34 4555 47999999999999999
Q ss_pred HHH-----hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC--CCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccC
Q 012095 172 VLA-----VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRI--SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 172 ~~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~--~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~ 244 (471)
+.+ ++++||.|++++|+|.+|...++..|++++.++++. +++|.+|+++|++++++++++|++++||||||.+
T Consensus 181 ~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~ 260 (533)
T 3f6t_A 181 FHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKE 260 (533)
T ss_dssp HHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBC
T ss_pred HHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccc
Confidence 998 789999999999999999999999999999999875 5678999999999999899999999999999999
Q ss_pred CCHHHHHHHHHHHH-hCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH----
Q 012095 245 YPKNLLDEIARIVA-KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---- 319 (471)
Q Consensus 245 ~~~~~l~~i~~l~~-~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~---- 319 (471)
++.+++++|+++|+ +| +++||+||+|.++.++. .++.... .+++++++||||.+|++|+|+||++++++
T Consensus 261 ~~~~~l~~l~~la~~~~-~~~li~De~y~~~~~~~---~~~~~~~--~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~ 334 (533)
T 3f6t_A 261 FDTNALNAIKQAVEKNP-KLMIISDEVYGAFVPNF---KSIYSVV--PYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFD 334 (533)
T ss_dssp CCHHHHHHHHHHHHHCT-TCEEEEECTTGGGSTTC---CCHHHHS--GGGEEEEEESHHHHTCGGGCEEEEEEESSCHHH
T ss_pred cCHHHHHHHHHHHHhCC-CCEEEEcCCccccccCc---cCHhhcC--CCCEEEEecCcccCCCcccceEEEEECcHHHHH
Confidence 99999999999999 68 99999999999887643 2333332 47899999999999999999999999776
Q ss_pred -HHHHH--------------------------------HHHHhcccCCCChHHHHH----HHHHHhc----cCCChHHHH
Q 012095 320 -FVAAC--------------------------------NKIQSQFTSGASSISQKA----GVAALGL----GYAGGEVVS 358 (471)
Q Consensus 320 -~i~~l--------------------------------~~~~~~~~~~~~~~~q~a----a~~~L~~----~~~~~~~~~ 358 (471)
+++.+ .........+++.+.|.+ +..+|.. .. ...+++
T Consensus 335 ~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~-~~~~~~ 413 (533)
T 3f6t_A 335 DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGS-DDPYID 413 (533)
T ss_dssp HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGT-BCHHHH
T ss_pred HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccc-hHHHHH
Confidence 43322 233445566788999988 4556641 11 368899
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCC------CCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGF------GKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
++++.|+++++++.+.|. + ++.+..|+++||+|++++...... .+. ....++.+++.+|++++||.+.||+
T Consensus 414 ~~~~~~~~r~~~l~~~L~-~-~~~~~~~~~g~~~~~~l~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~ 490 (533)
T 3f6t_A 414 IARKLVSERYDQLHDAMQ-A-PKDETDTNTHYYSLIDIYRLAEKI-YGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGV 490 (533)
T ss_dssp HHHHHHHHHHHHHHHHHT-C-CCCCSTTBCCSEEEEEHHHHHHHH-HCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTE
T ss_pred HHHHHHHHHHHHHHHhcC-C-CccccCCCceEEEEEehHhhhhhc-cchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCc
Confidence 999999999999999997 6 788888999999999986410000 000 0001567888888888899999999
Q ss_pred CCCC-CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 433 AFGD-DTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 433 ~f~~-~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
.|+. ++++|+|++. +++++++++++|.++++++
T Consensus 491 ~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~ 525 (533)
T 3f6t_A 491 GFGAKPGELRVSQANLPTEDYALIGKQVLELLKEY 525 (533)
T ss_dssp EECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHH
Confidence 9986 5899999996 9999999999999998875
No 71
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1e-46 Score=380.28 Aligned_cols=365 Identities=15% Similarity=0.120 Sum_probs=279.6
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCC---CCC--CChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGE---PDF--DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~---~~~--~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (471)
.++..++++++..+....... .++++|+|+.|+ ++. ++++.+.+++.+++.+ ...+|++..|..+||+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (396)
T 2q7w_A 3 ENITAAPADPILGLADLFRAD--ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp TTCCCCCC-------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCCchHHHHHHHHhcc--CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence 345666677666555443332 356799999998 333 4568899999888765 45679899999999999999
Q ss_pred HHHHHhCCCCCCCcEEE--eCChHHHHHHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHH
Q 012095 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 219 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e 219 (471)
++....+.++++++|++ |+|+++++..+++.+ +.+||+|++++|+|++|...++..|++++.++++.++++.+|++
T Consensus 81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 99654443346789998 999999999988766 46999999999999999999999999999999865456889999
Q ss_pred HHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCC-CCccccccCCCCCCceE
Q 012095 220 VLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAP-ATHTSFASLPGMWERTL 295 (471)
Q Consensus 220 ~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~~i 295 (471)
++++++++ +++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++ ....++..+....++++
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 239 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEK-GWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI 239 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCccchhHHHHHHHhcCCcEE
Confidence 99999864 366777899999999999999999999999999 99999999999987753 11223333322247899
Q ss_pred EEecCCcccCccchhheeeEc---CH----HHHHHHHHHHhcccCCCChHHHHHHHHHHhccC---CChHHHHHHHHHHH
Q 012095 296 TVNGFSKAFAMTGWRLGYIAG---PK----HFVAACNKIQSQFTSGASSISQKAGVAALGLGY---AGGEVVSKMVKAFR 365 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~---~~----~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~---~~~~~~~~~~~~~~ 365 (471)
+++||||.+|++|+|+||+++ ++ ++++.+.........+++.++|.++.++|+... ...++++++++.++
T Consensus 240 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~ 319 (396)
T 2q7w_A 240 VASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQ 319 (396)
T ss_dssp EEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHH
T ss_pred EEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999986 55 456655554444455679999999999987520 00367888999999
Q ss_pred HHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012095 366 ERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 442 (471)
Q Consensus 366 ~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi 442 (471)
++++++.+.|+++. ++++..|++|+|+|++++ . +++..+++++||.+.|| +||
T Consensus 320 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~~l~~~gv~v~~~--------~Ri 375 (396)
T 2q7w_A 320 RMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT---------------K-EQVLRLREEFGVYAVAS--------GRV 375 (396)
T ss_dssp HHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEECCTT--------CEE
T ss_pred HHHHHHHHHHHhcCCCCCcceecCCCceEEEecCC---------------H-HHHHHHHHhcCeeecCC--------ceE
Confidence 99999999999873 388878899999998653 3 34445565669999885 599
Q ss_pred Eeec-CHHHHHHHHHHHHHH
Q 012095 443 SYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 443 s~~~-~~e~i~~~~~~l~~~ 461 (471)
+++. +++++++++++|+++
T Consensus 376 s~~~~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 376 NVAGMTPDNMAPLCEAIVAV 395 (396)
T ss_dssp EGGGCCTTTHHHHHHHHHHH
T ss_pred EEeecCHHHHHHHHHHHHhc
Confidence 9997 889999999999875
No 72
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=2.7e-46 Score=391.49 Aligned_cols=355 Identities=22% Similarity=0.322 Sum_probs=279.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHH-HHHhCCCC---CCCcEEEeCChHHHHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKL-KEENGLSY---TPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~~~~g~~~---~~~~i~it~G~~~al~~~~ 172 (471)
+|+|+.|++.++ ++.+.+++.+.+.. .+|++..|..++|+++++++ .+.++..+ ++++|++|+|+++++..++
T Consensus 106 ~i~l~~g~~~~~-~~~~~~al~~~~~~--~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~ 182 (546)
T 2zy4_A 106 SLSYVRDQLGLD-PAAFLHEMVDGILG--CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIF 182 (546)
T ss_dssp HHHHHHHTSCCC-HHHHHHHHHHHHHT--CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHH
T ss_pred hhecccCCCCCC-ChHHHHHHHHhhhc--CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHH
Confidence 799999999874 55666777776642 68988889999999988765 44444322 4689999999999999999
Q ss_pred HH-----hcCCCCeEEEcCCCCCChHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 173 LA-----VCSPGDEVIIPAPFWVSYPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 173 ~~-----l~~~gd~Vlv~~p~y~~~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
.+ +++|||.|++++|+|+.|...+... |++++.++++++++|.+|+++|++++++++++|++++||||||.++
T Consensus 183 ~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~ 262 (546)
T 2zy4_A 183 ESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKM 262 (546)
T ss_dssp HHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCC
T ss_pred HHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccC
Confidence 87 5789999999999999999886654 6899999998877899999999998888899999999999999999
Q ss_pred CHHHHHHHHHHH--HhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH-HHH
Q 012095 246 PKNLLDEIARIV--AKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVA 322 (471)
Q Consensus 246 ~~~~l~~i~~l~--~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~i~ 322 (471)
+.+++++|+++| +++ +++||+||+|.++.++ ..++.... .+++|+++||||.+|++|+|+||++++++ +++
T Consensus 263 ~~~~l~~l~~~a~~~~~-~~~ii~De~y~~~~~~---~~s~~~~~--~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~ 336 (546)
T 2zy4_A 263 DQRSLERVRNIVAEHRP-DLMILTDDVYGTFADD---FQSLFAIC--PENTLLVYSFSKYFGATGWRLGVVAAHQQNVFD 336 (546)
T ss_dssp CHHHHHHHHHHHHHTCT-TCEEEEECTTGGGSTT---CCCHHHHC--GGGEEEEEESTTTTTCGGGCEEEEEEESSCHHH
T ss_pred CHHHHHHHHHHHHhccC-CcEEEEeCcchhhccc---CcCHHHhC--CCCEEEEEeCccccCCCCcceEEEEECCHHHHH
Confidence 999999999999 778 9999999999998753 23444332 36899999999999999999999999875 777
Q ss_pred HHHHH-------------H-----------------------hcccCCCChHHHHHH-----HHHHhccCCChHHHHHHH
Q 012095 323 ACNKI-------------Q-----------------------SQFTSGASSISQKAG-----VAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 323 ~l~~~-------------~-----------------------~~~~~~~~~~~q~aa-----~~~L~~~~~~~~~~~~~~ 361 (471)
.+.+. . .....+.+.+.|.++ .+++++ .+.|+++++
T Consensus 337 ~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~---~~~~~~~~r 413 (546)
T 2zy4_A 337 LALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE---ADEYKHTLK 413 (546)
T ss_dssp HHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT---TCHHHHHHH
T ss_pred HHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 76321 1 122346788888774 233443 368899999
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCC-cccCCC----CCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 362 KAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGS-EAEGFG----KIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~-~~~~~~----~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
+.|+++++.+.+.|. + ++.+.+|+++||+|++++..... ...++. ...++.+++.++++++||.+.||+.|+.
T Consensus 414 ~~~~~r~~~l~~~L~-~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~ 491 (546)
T 2zy4_A 414 QLIRRRETTLYRELG-M-PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGS 491 (546)
T ss_dssp HHHHHHHHHHHGGGT-S-SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTC
T ss_pred HHHHHHHHHHHHhcC-C-CcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCC
Confidence 999999999999996 5 56667889999999998631000 000000 0002345555566667999999999985
Q ss_pred -CCcEEEEeec-CHHHHHHHHHHHHHHHHhh
Q 012095 437 -DTCIRISYAA-SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 -~~~iRis~~~-~~e~i~~~~~~l~~~l~~~ 465 (471)
++++||+++. +++++++++++|+++++++
T Consensus 492 ~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 492 NRPSGRASLANLNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp SSCEEEEESSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 4689999998 8899999999999988754
No 73
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=3.9e-45 Score=364.97 Aligned_cols=332 Identities=23% Similarity=0.375 Sum_probs=286.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+++|+|+.|++++++|+.+.+++.+++.+ ...+|+ ..+..++|+++++++ |.+ ++++|++|+|+++++..+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~~~~l~~~la~~~----g~~-~~~~i~~~~g~t~a~~~~~~ 103 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYP-VPSSEALRAKLKEVM----QVP-AGMEVLLGNGSDEIISMLAL 103 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSC-CCCHHHHHHHHHHHH----TCC-TTCEEEEEEHHHHHHHHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCC-CCcHHHHHHHHHHHh----CCC-CcceEEEcCCHHHHHHHHHH
Confidence 57899999999999999999999998874 467784 468899999999987 432 67899999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++++||+|+++.|+|.++...++..|++++.++++. +|.+|++++++++++ ++++|++++||||||.+++.+++++
T Consensus 104 ~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~ 181 (367)
T 3euc_A 104 AAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEA 181 (367)
T ss_dssp HTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999874 577999999999987 8999999999999999999999999
Q ss_pred HHHHHHhCC-CeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 253 IARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 253 i~~l~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
|+++|++|+ |+++|+||+|.++...+ ... .+ ...++++++.||||. +++|+|+||+++++++++.+.....
T Consensus 182 i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~-~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~~~~-- 253 (367)
T 3euc_A 182 IVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RL-TDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRP-- 253 (367)
T ss_dssp HHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GG-GTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHGGGCC--
T ss_pred HHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HH-hhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHHHhCC--
Confidence 999999873 59999999999876332 111 12 235789999999999 8999999999999999998877554
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
.++++.++|.++.++|+. .+++++.+++++++++++.+.|+++||+.+. +.+++|+|++++
T Consensus 254 ~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-------------- 314 (367)
T 3euc_A 254 PYNVNVLTEATALFALEH----VAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-------------- 314 (367)
T ss_dssp SSCCCHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--------------
T ss_pred CCCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--------------
Confidence 446899999999999985 7889999999999999999999999899865 556667898886
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++.+.|.+ +||.+.+|..|+. ++++|++++ +++++++++++|+++++
T Consensus 315 ~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 315 DAAQTFDRLLA-RKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp CHHHHHHHHHT-TTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHH-CCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 46788888754 5999999998763 589999988 88999999999998764
No 74
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.3e-46 Score=379.33 Aligned_cols=331 Identities=18% Similarity=0.183 Sum_probs=266.7
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHH--Hc--CCCCCCCCCCC-----HHHHHHHHHHHHHHhCCCCCC-CcEEEeC
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAI--RE--GFTRYTPNAGT-----LELRSAICHKLKEENGLSYTP-DQILVSN 162 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~--~~--~~~~Y~~~~G~-----~~lr~~ia~~~~~~~g~~~~~-~~i~it~ 162 (471)
.+.++|+|+.|+|++++|+.+.+++.+.. .. +..+|++..|. ++||++++++++ .+|+++++ ++|++|+
T Consensus 20 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~ 98 (391)
T 3bwn_A 20 MSDFVVNLDHGDPTAYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGT 98 (391)
T ss_dssp TTTSCEECSSCCCGGGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEE
T ss_pred CCCCeeEcCCCCCCCCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeC
Confidence 46679999999999877777777653322 11 45689999998 999999999998 67888877 5999999
Q ss_pred ChHHHHHHHHHHhcCCCC----eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 163 GAKQSILQAVLAVCSPGD----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 163 G~~~al~~~~~~l~~~gd----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
|+++++..++++++++|| +|++++|+|+.|...++..|++++.++++.+ + ++ .+++++|++++||
T Consensus 99 G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l~~p~ 167 (391)
T 3bwn_A 99 GSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELVTSPN 167 (391)
T ss_dssp HHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEEESSC
T ss_pred ChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEECCCC
Confidence 999999999999999999 9999999999999999999999999887643 2 22 2578999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc-C
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-P 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~ 317 (471)
||||.+++ +|++.++.+ +++||+||+|.+ +. ..++. ...+++|+++||||.||++|+|+||+++ +
T Consensus 168 NPtG~~~~-----~l~~~~~~~-~~~ii~De~y~~----~~-~~~l~---~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 233 (391)
T 3bwn_A 168 NPDGTIRE-----TVVNRPDDD-EAKVIHDFAYYW----PH-YTPIT---RRQDHDIMLFTFSKITGHAGSRIGWALVKD 233 (391)
T ss_dssp TTTCCCCC-----CCC-----C-CCEEEEECTTCS----TT-TSCCC---CCBCCSEEEEEHHHHHSCGGGCEEEEEECC
T ss_pred CCCchhHH-----HHHHHhhcC-CCEEEEeCCCCC----CC-CCccc---cCCCCeEEEEechhhcCCCccceEEEEecC
Confidence 99999997 344422222 399999999973 21 12222 1357899999999999999999999997 8
Q ss_pred HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCC-------ChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC----
Q 012095 318 KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYA-------GGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP---- 386 (471)
Q Consensus 318 ~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p---- 386 (471)
+++++.+...+.....+++.++|.++..+|+.+.. .+.|++++++.|+++++++.+.|++++|+.+..|
T Consensus 234 ~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~ 313 (391)
T 3bwn_A 234 KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAF 313 (391)
T ss_dssp HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEE
T ss_pred HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccc
Confidence 99999999887766678999999999999986310 1468999999999999999999999877776543
Q ss_pred ---------CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-CCcEEEEeecCHHHHHHHHH
Q 012095 387 ---------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAVE 456 (471)
Q Consensus 387 ---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-~~~iRis~~~~~e~i~~~~~ 456 (471)
.+|+|+|++++.. +++..+++++||.+.||+.|+. ++++|||++.++++++++++
T Consensus 314 ~~f~~~~~~~~g~~~~~~~~~~---------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~~~~~ 378 (391)
T 3bwn_A 314 CNYFGKSLESYPAFAWLGTKEE---------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLE 378 (391)
T ss_dssp ETTTTEEECCCCSEEEEEESSS---------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHH
T ss_pred cccccccCCCcceEEEecCCcH---------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHHHHHH
Confidence 4556899998631 1334455567999999999986 68999999999999999999
Q ss_pred HHHHHHHh
Q 012095 457 RIKKGLLT 464 (471)
Q Consensus 457 ~l~~~l~~ 464 (471)
+|++++++
T Consensus 379 ~L~~~~~~ 386 (391)
T 3bwn_A 379 RLANMKLI 386 (391)
T ss_dssp HHHSCC--
T ss_pred HHHHHHHh
Confidence 99987754
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=4e-44 Score=358.28 Aligned_cols=330 Identities=21% Similarity=0.310 Sum_probs=280.9
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
.|+|+.|++++++|+.+.+++.+++.+. ..+|++..+ .++++++++++++.+|.++++++|++|+|+++++..+++
T Consensus 32 ~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~ 110 (369)
T 3cq5_A 32 DIRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQ 110 (369)
T ss_dssp SEECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred ceeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHH
Confidence 3999999999988999999999888652 567866555 799999999999998887888999999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
+++++||.|++++|+|+++...++..|++++.+|.+ ++|.+|++++++++++ ++++|++++|+||||.+++. ++
T Consensus 111 ~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~---~~ 185 (369)
T 3cq5_A 111 AFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSL---DD 185 (369)
T ss_dssp HHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCH---HH
T ss_pred HhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH---HH
Confidence 999999999999999999999999999999999975 4577999999999987 89999999999999999995 55
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC-ceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE-RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+.++|+.+ +++||+||+|.++.++ .+...+....+ +++++.||||.+|++|+|+||+++++++++.+......
T Consensus 186 l~~l~~~~-~~~li~De~~~~~~~~----~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~- 259 (369)
T 3cq5_A 186 VERIINVA-PGIVIVDEAYAEFSPS----PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLP- 259 (369)
T ss_dssp HHHHHHHC-SSEEEEECTTGGGCCS----CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCT-
T ss_pred HHHHHHhC-CCEEEEECCchhhcCC----cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCC-
Confidence 55566667 7999999999987653 23333322345 89999999999999999999999999999888765543
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
++++.+.|.++.++|+. .+++++.+++++++++++.+.|++. |+.+.++ ++.|+|++++.
T Consensus 260 -~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~------------- 319 (369)
T 3cq5_A 260 -YHLSALSQAAAIVALRH----SADTLGTVEKLSVERVRVAARLEEL-GYAVVPS-ESNFVFFGDFS------------- 319 (369)
T ss_dssp -TCSCHHHHHHHHHHHHT----HHHHHTHHHHHHHHHHHHHHHHHHH-TCEEECC-SSSEEEEECCS-------------
T ss_pred -CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHhC-CCEECCC-CCeEEEEECCC-------------
Confidence 45899999999999985 5788999999999999999999885 8888754 45568888861
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++.+.|.+ +||.+.|| +.++++|++++ +++++++++++|+++++
T Consensus 320 ~~~~l~~~l~~-~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 DQHAAWQAFLD-RGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp SHHHHHHHHHH-TTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHH-CCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 67789988865 59999998 34689999999 78899999999998874
No 76
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=7.6e-46 Score=377.81 Aligned_cols=330 Identities=16% Similarity=0.197 Sum_probs=277.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHH-cCCCC--CCCCC-C---CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIR-EGFTR--YTPNA-G---TLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~-~~~~~--Y~~~~-G---~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..+|+|+.|+|++++|+.+.+++.+++. .+... |++.. | ..+||++|++++++.++..+++++|++|+|++++
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 4589999999999888888888887763 33433 98888 9 9999999999999877776789999999999999
Q ss_pred HHHHHHHh--------cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCC
Q 012095 168 ILQAVLAV--------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSN 239 (471)
Q Consensus 168 l~~~~~~l--------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~N 239 (471)
+..++.++ ++|||.|++++|+|+.|...++..|++++. |.+|++.|++++++++|+|++++|||
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l~~p~N 207 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMVTSPNN 207 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEEESSCT
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEEcCCCC
Confidence 99999999 999999999999999999999999988763 44788999998888899999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc-CH
Q 012095 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PK 318 (471)
Q Consensus 240 PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~ 318 (471)
|||.+++ +. ++ ++.++.|+.|.+ + ..++..+. .+++|+++||||.+|++|+|+||+++ ++
T Consensus 208 PtG~~~~-~~-------l~---~~~~i~d~~~~~----~--~~s~~~~~--~~~~i~~~S~SK~~g~~G~RiG~~~~~~~ 268 (427)
T 2hox_A 208 PEGLLRH-AV-------IK---GCKSIYDMVYYW----P--HYTPIKYK--ADEDILLFTMSKFTGHSGSRFGWALIKDE 268 (427)
T ss_dssp TTCCCCC-CS-------ST---TCEEEEECTTCS----T--TTSCCCSC--BCCSEEEEEHHHHTSCGGGCCEEEEECCH
T ss_pred CcccccH-HH-------Hc---CCCEEEeecccC----C--CCCccccC--CCceEEEEeChhcCCCCCceEEEEEECCH
Confidence 9999999 42 22 456778887742 2 23444443 57899999999999999999999999 58
Q ss_pred HHHHHHHHHHhcccCCCChHHHHHHHHHHhccC--------CChHHHHHHHHHHHHHHHHHHHHhcCCCCCee-------
Q 012095 319 HFVAACNKIQSQFTSGASSISQKAGVAALGLGY--------AGGEVVSKMVKAFRERRDFLVKSFGELEGVKM------- 383 (471)
Q Consensus 319 ~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~--------~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~------- 383 (471)
++++.+.+.......+++.++|.++..+|..+. ..++++++.++.++++++++.+.|++++|+.+
T Consensus 269 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~ 348 (427)
T 2hox_A 269 SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSE 348 (427)
T ss_dssp HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCE
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcccccccccc
Confidence 999999998877777899999999999997521 02467788899999999999999998766553
Q ss_pred -------eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-CCcEEEEeecCHHHHHHHH
Q 012095 384 -------SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYAASLTTLQAAV 455 (471)
Q Consensus 384 -------~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-~~~iRis~~~~~e~i~~~~ 455 (471)
..|++++|+|++++. +..++++.|+++.||.+.||..|+. +++||||++.++++|++++
T Consensus 349 ~~~~~~~~~p~~g~f~~~~~~~-------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l~~~l 415 (427)
T 2hox_A 349 YCNYFRRMRPPSPSYAWVKCEW-------------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLM 415 (427)
T ss_dssp EETTTTEEECCCCSEEEEEECS-------------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHH
T ss_pred ccccccccCCCCceEEEEECCC-------------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHHHHHH
Confidence 356789999999974 3456788888667999999999986 7899999999999999999
Q ss_pred HHHHHHHHh
Q 012095 456 ERIKKGLLT 464 (471)
Q Consensus 456 ~~l~~~l~~ 464 (471)
++|++++++
T Consensus 416 ~~l~~~~~~ 424 (427)
T 2hox_A 416 YYLKDMVKA 424 (427)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhh
Confidence 999998854
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=5.8e-44 Score=352.06 Aligned_cols=323 Identities=19% Similarity=0.273 Sum_probs=266.9
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
...+++|+|+.|++++++|+.+.+++.+.... ..+| |..|..+||+++++++ | +++++|++|+|+++++..+
T Consensus 13 ~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~~~y-~~~~~~~lr~~la~~~----~--~~~~~i~~t~G~~~~l~~~ 84 (337)
T 3p1t_A 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR-INRY-PFDAEPRVMRKLAEHF----S--CPEDNLMLVRGIDECFDRI 84 (337)
T ss_dssp -CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG-TTSC-CTTHHHHHHHHHHHHH----T--SCGGGEEEESHHHHHHHHH
T ss_pred cCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh-hccC-CCCchHHHHHHHHHHh----C--cCHHHEEEeCCHHHHHHHH
Confidence 34567999999999999999999999987654 6678 6789999999999997 3 4678999999999999999
Q ss_pred HHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 172 VLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 172 ~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
+..+ +||+|++++|+|.++...++..|++++.++++. +|.+|+++++++ .+++++++++||||||.+++.+
T Consensus 85 ~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~--- 155 (337)
T 3p1t_A 85 SAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG--- 155 (337)
T ss_dssp HHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH---
T ss_pred HHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH---
Confidence 8887 999999999999999999999999999999863 577999999986 4688999999999999999954
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
++.++|+++ ++ +|+||+|.++.+.+.. . ....+++++++||||.+|++|+|+||+++++++++.+.+...
T Consensus 156 ~l~~l~~~~-~~-~ivDea~~~~~~~~~~--~----~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~-- 225 (337)
T 3p1t_A 156 ELDQLRQRA-GK-LLIDETYVDYSSFRAR--G----LAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQW-- 225 (337)
T ss_dssp HHHHHHHHC-SE-EEEECTTGGGSSCSSS--C----CCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTSC--
T ss_pred HHHHHHHhC-Cc-EEEECCChhhcccccc--c----cccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhcC--
Confidence 556667788 77 5559999986543321 1 122578899999999999999999999999999998877543
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
.++++.+.|.++.++|+. .+++.+.++++.++++.+.+.|+++ |+.+.+++++| +|+..+
T Consensus 226 ~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~-------------- 285 (337)
T 3p1t_A 226 FCNVGTLDLHALEAALDN----DRAREAHIAKTLAQRRRVADALRGL-GYRVASSEANF-VLVENA-------------- 285 (337)
T ss_dssp TTCSCHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSE-EEEECT--------------
T ss_pred CCCCCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-cCEECCCCCeE-EEEEcC--------------
Confidence 456889999999999874 4556677777888899999999988 88888777776 555554
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
+..++.+.|. ++||.+.||..|+.++++|+|++ ++++++++++.|+++++
T Consensus 286 ~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 286 AGERTLRFLR-ERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYSD 335 (337)
T ss_dssp TTHHHHHHHH-HTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHH-HCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhh
Confidence 3346666655 45999999999998899999998 67888999988887653
No 78
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=9.1e-44 Score=354.37 Aligned_cols=345 Identities=19% Similarity=0.306 Sum_probs=283.7
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHK 144 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~ 144 (471)
+.+.+..++++..... ...|+++|+|+.|++++++|+.+.+++.+++.++ ..+| +..+..+||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~-------~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~lr~~la~~ 77 (360)
T 3hdo_A 6 LRQNIASMKGYIPGYQ-------PPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIY-PSASSQKLREVAGEL 77 (360)
T ss_dssp CCHHHHHCCCCCCCCC-------CSCCTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSC-CCSSCHHHHHHHHHH
T ss_pred hHHHHHhcCCcCCCCC-------CccccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcC-CCCchHHHHHHHHHH
Confidence 4555666655533110 0245679999999999999999999999998775 6678 455779999999999
Q ss_pred HHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 145 LKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 145 ~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
+ | +++++|++|+|+++++..++++++++||+|++++|+|.++...++..|++++.++++. ++.+ +++++.
T Consensus 78 ~----g--~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~ 147 (360)
T 3hdo_A 78 Y----G--FDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPER 147 (360)
T ss_dssp H----T--CCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSS
T ss_pred h----C--cCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhh
Confidence 7 3 5788999999999999999999999999999999999999999999999999999864 3444 555444
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
+ +++++++++|+||||.+++ +++|.++|+++ +++||+||+|.++. +.....+ ....++++++.||||.+
T Consensus 148 ~--~~~~v~i~~p~nptG~~~~---~~~l~~l~~~~-~~~li~De~~~~~~--~~~~~~~---~~~~~~~i~~~s~sK~~ 216 (360)
T 3hdo_A 148 Y--EGKVFFLTTPNAPLGPSFP---LEYIDELARRC-AGMLVLDETYAEFA--ESNALEL---VRRHENVVVTRTLSKSY 216 (360)
T ss_dssp B--CSSEEEEESSCTTTCCCCC---HHHHHHHHHHB-SSEEEEECTTGGGS--SCCCTHH---HHHCSSEEEEEESTTTT
T ss_pred c--CCCEEEEeCCCCCCCCCcC---HHHHHHHHHHC-CCEEEEECChHhhC--CcchhHH---hccCCCEEEEecchHhh
Confidence 3 4678999999999999999 55667778899 99999999999863 2222222 12357899999999999
Q ss_pred CccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 305 AMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 305 g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
|++|+|+||+++++++++.+...... ++++.++|.++.++|+. .+++++.+++++++++++.+.|+++ |+.+.
T Consensus 217 g~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 289 (360)
T 3hdo_A 217 SLAGMRIGLAIARPEVIAALDKIRDH--YNLDRLAQAACVAALRD----QAYLSECCRRIRETREWFTTELRSI-GYDVI 289 (360)
T ss_dssp SCTTSCCEEEECCHHHHHHHHHHSCS--CCSCHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC
T ss_pred cCCccceeeEeeCHHHHHHHHHhCCC--CCCCHHHHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc
Confidence 99999999999999999999887654 56899999999999985 6789999999999999999999988 88887
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~ 463 (471)
++.+ .|+|+.++.. +..++.+.|.++ ||.+.||..++.++++|++++ ++++++++++.|+++.+
T Consensus 290 ~~~~-~~~~~~~~~~------------~~~~l~~~l~~~-gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 290 PSQG-NYLFATPPDR------------DGKRVYDGLYAR-KVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGE 353 (360)
T ss_dssp CCSS-SEEEEECTTC------------CHHHHHHHHHHT-TEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC
T ss_pred CCCc-cEEEEECCCC------------CHHHHHHHHHHC-CEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhc
Confidence 5554 5578887642 678899988765 999999887666789999998 77899999999988754
No 79
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=7.2e-45 Score=366.58 Aligned_cols=362 Identities=15% Similarity=0.124 Sum_probs=287.0
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC---CC--CChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP---DF--DTPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~---~~--~~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 143 (471)
.++..++++.+..+...... ..++++|+|+.|++ +. ++++.+.+++.+++.. ...+|++..|..++|+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (394)
T 2ay1_A 3 GNLKPQAPDKILALMGEFRA--DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp GGCCCCCCCSHHHHHHHHHH--CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred ccCccCCCccHHHHHHHHHh--CCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence 45677888887776655443 25678999999984 22 4568899999888764 45689888999999999999
Q ss_pred HHHHHhCCCCCCCcEEE--eCChHHHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHH
Q 012095 144 KLKEENGLSYTPDQILV--SNGAKQSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPK 219 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~i--t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e 219 (471)
++... .+++++|++ |+|+++++..+++.+.. +||+|++++|+|+++...++..|++++.++++.++++.+|++
T Consensus 81 ~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 157 (394)
T 2ay1_A 81 LILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFE 157 (394)
T ss_dssp HHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHH
T ss_pred HHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHH
Confidence 98422 236789999 99999999999887754 999999999999999999999999999999865456889999
Q ss_pred HHHhhhccC---CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCC-CccccccCCCCCCceE
Q 012095 220 VLESKLTEK---SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPA-THTSFASLPGMWERTL 295 (471)
Q Consensus 220 ~l~~~l~~~---~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~i 295 (471)
++++++++. ++++++++||||||.+++.+++++|+++|++| +++||+||+|.++.+++. ...++..+....++++
T Consensus 158 ~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i 236 (394)
T 2ay1_A 158 GMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKT-GALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL 236 (394)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecCccccccCcccchHHHHHHhhcCCCEE
Confidence 999998653 56667799999999999999999999999999 999999999999877531 1222332322246789
Q ss_pred EEecCCcccCccchhheeeEc---CHHHHHH----HHHHHhcccCCCChHHHHHHHHHHhccCC---ChHHHHHHHHHHH
Q 012095 296 TVNGFSKAFAMTGWRLGYIAG---PKHFVAA----CNKIQSQFTSGASSISQKAGVAALGLGYA---GGEVVSKMVKAFR 365 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~---~~~~i~~----l~~~~~~~~~~~~~~~q~aa~~~L~~~~~---~~~~~~~~~~~~~ 365 (471)
+++||||.+|++|+|+||+++ ++++++. +.........++++++|.++.++|+.... ..+++++++++++
T Consensus 237 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~ 316 (394)
T 2ay1_A 237 IAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGML 316 (394)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 6765544 33333344455699999999999985200 0357889999999
Q ss_pred HHHHHHHHHhcCCC---CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEE
Q 012095 366 ERRDFLVKSFGELE---GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRI 442 (471)
Q Consensus 366 ~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRi 442 (471)
++++++.+.|+++. ++++..|++|+|+|++++ ...+ ..+++++||.+.|| +|+
T Consensus 317 ~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~-~~~l~~~gi~v~~~--------~Ri 372 (394)
T 2ay1_A 317 RLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT---------------PEQV-KRIKEEFGIYMVGD--------SRI 372 (394)
T ss_dssp HHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC---------------HHHH-HHHHHHHCEECCTT--------CEE
T ss_pred HHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC---------------HHHH-HHHHHhCCEEecCC--------CeE
Confidence 99999999998863 478778888999998663 3344 44555569999885 599
Q ss_pred Eeec-CHHHHHHHHHHHHHH
Q 012095 443 SYAA-SLTTLQAAVERIKKG 461 (471)
Q Consensus 443 s~~~-~~e~i~~~~~~l~~~ 461 (471)
+++. +++++++++++|+++
T Consensus 373 s~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 373 NIAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp EGGGCCTTTHHHHHHHHHHH
T ss_pred EeecCCHhhHHHHHHHHHHc
Confidence 9986 889999999999875
No 80
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.7e-44 Score=355.71 Aligned_cols=327 Identities=16% Similarity=0.264 Sum_probs=266.5
Q ss_pred cCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 93 AGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
.|+++|||+.|++++++|+.+.+++.+++ ....+|++..+ .+||+++++++ | +++++|++|+|+++++..++
T Consensus 13 ~g~~~id~~~~~~~~~~~~~v~~a~~~~~-~~~~~y~~~~~-~~lr~~la~~~----~--~~~~~i~~t~g~~~al~~~~ 84 (350)
T 3fkd_A 13 LSSEIVNFSTTVWTDGDKDHLEKHLVENL-NCIRHYPEPDA-GTLRQMLAKRN----S--VDNNAILVTNGPTAAFYQIA 84 (350)
T ss_dssp ---CCEECSCCSCCCSCCHHHHHHHHHTG-GGGGSCCCTTC-HHHHHHHHHHT----T--CCGGGEEEESHHHHHHHHHH
T ss_pred ccccEEEccCCCCCCCCCHHHHHHHHHhH-hHHhcCCCCcH-HHHHHHHHHHh----C--cCHHHEEEcCCHHHHHHHHH
Confidence 46789999999999999999999998877 44677866666 89999999986 3 57789999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC-CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPT-RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~-~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
++++ ||+|++++|+|..+...++..|++++.+++ +.+++ +++ +++++|++++|+||||.+++.++++
T Consensus 85 ~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~~~l~ 152 (350)
T 3fkd_A 85 QAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQRTEIL 152 (350)
T ss_dssp HHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCHHHHH
Confidence 9887 999999999999999999999999999998 54344 333 5789999999999999999988888
Q ss_pred HHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcc
Q 012095 252 EIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQF 331 (471)
Q Consensus 252 ~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~ 331 (471)
+|+++|++ .+||+||+|.++.+++.... ..+. ..+++++++||||.+|++|+|+||+++++++++.+.....
T Consensus 153 ~l~~~~~~---~~li~Dea~~~~~~~~~~~~--~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~-- 224 (350)
T 3fkd_A 153 RLLNDHPD---TTFVLDQSYVSFTTEEVIRP--ADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFST-- 224 (350)
T ss_dssp HHHHHCTT---SEEEEECTTTTSCSSCCCCG--GGGT-TCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCC--
T ss_pred HHHHhCCC---CEEEEECchhhhccCcchhh--HHhh-cCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCC--
Confidence 87777654 39999999999877654222 2232 3688999999999999999999999999999999887654
Q ss_pred cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCC
Q 012095 332 TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIE 411 (471)
Q Consensus 332 ~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 411 (471)
.++++.++|.++.++|+.. ..+.++.++.+ ++++.+.+.|++++|+.+.++. +.|+|++++..
T Consensus 225 ~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~~------------ 287 (350)
T 3fkd_A 225 PWAVNALAIEAAKFILIHP---AQFTLPIRKWQ-RNTVDFITALNRLDGVEVHPSG-TTFFLLRLKKG------------ 287 (350)
T ss_dssp TTCSCHHHHHHHHHHHHCT---TTTCCCHHHHH-HHHHHHHHHHHHSTTEEECCCS-SSEEEEEESSS------------
T ss_pred CCCCCHHHHHHHHHHHhCH---HHHHHHHHHHH-HHHHHHHHHHhcCCCcEECCCC-CcEEEEECCCC------------
Confidence 3468999999999999863 23444444444 8888999999888899887555 45578888752
Q ss_pred CHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 412 NSESLCRYLLDKAQVALVPGDAFGD--DTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 412 ~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
+..++.+.|++++||.+.||..|+. ++++||+++ +.++++++++.|++++++.
T Consensus 288 ~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 288 TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence 6789999998856999999999875 689999998 5577888888888877654
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=2.2e-42 Score=340.99 Aligned_cols=314 Identities=21% Similarity=0.332 Sum_probs=259.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIR-EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
++|+|+.|++++++|+.+.+++.+++. .+..+| +..+..++|+++++++++. ++++++|++|+|+++++..++++
T Consensus 20 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y-~~~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~~~~~~ 95 (335)
T 1uu1_A 20 DKTYLALNENPFPFPEDLVDEVFRRLNSDALRIY-YDSPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIYVMMLM 95 (335)
T ss_dssp CSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSC-CCSSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHHHHHHH
T ss_pred cceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHHHHHHH
Confidence 589999999988889999999998773 335678 4457999999999998543 35678999999999999999988
Q ss_pred hcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+ ||+|+++ |+|.++...++..|++++.+|++ ++|.+|++++ +++++|++++||||||.+++.+++++|+
T Consensus 96 ~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~ 164 (335)
T 1uu1_A 96 F---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERIL 164 (335)
T ss_dssp S---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred h---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 7 8999999 99999999999999999999985 3467888877 5789999999999999999977666665
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG 334 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~ 334 (471)
++ . + ++|+||+|.++.++ ++.......+++++++||||.+|++|+|+||+++++++++.+...... ++
T Consensus 165 ~~---~-~-~li~De~~~~~~~~-----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~--~~ 232 (335)
T 1uu1_A 165 KT---G-A-FVALDEAYYEFHGE-----SYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP--FN 232 (335)
T ss_dssp HT---T-C-EEEEECTTHHHHCC-----CCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT--TC
T ss_pred Hh---C-C-EEEEECcchhhcch-----hHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC--CC
Confidence 54 4 7 89999999986542 112221235789999999999999999999999999999998876544 47
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHH
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSE 414 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (471)
++.++|.++.++|+. .+++++.+++++++++++.+.|+++ |+.+. |.+++|+|++++.. +..
T Consensus 233 ~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~------------~~~ 294 (335)
T 1uu1_A 233 VSYVSQMFAKVALDH----REIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFVFMEKE------------EKE 294 (335)
T ss_dssp SCHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECCTH------------HHH
T ss_pred cCHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECCCC------------CHH
Confidence 899999999999985 5688899999999999999999987 77765 45567899998741 567
Q ss_pred HHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 415 SLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 415 ~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
++.+.|.++ ||.+.|+ ++++|++++. .+++++++++|+++
T Consensus 295 ~~~~~l~~~-gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 295 RLLEHLRTK-NVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHH-TEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred HHHHHHHHC-CEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 889988875 9999982 4789999975 46799999988754
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.4e-41 Score=341.41 Aligned_cols=338 Identities=17% Similarity=0.190 Sum_probs=279.0
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+++|+|+.|++ ++++|+.+.+++.+++.+. ...|.+..|..++++++++++.+.+|. +++++|+|+++++
T Consensus 41 ~g~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~a~ 116 (398)
T 3a2b_A 41 DGRRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQSN 116 (398)
T ss_dssp TTEEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHHHH
T ss_pred CCceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHHHH
Confidence 4567999999998 6667889999999887652 234556778889999999999998884 5899999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCcccC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSV 244 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~~ 244 (471)
..++++++++||.|++++|+|..+...++..|++++.+++ +|++++++++++ ++++|++++|+||||.+
T Consensus 117 ~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~ 189 (398)
T 3a2b_A 117 LGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDI 189 (398)
T ss_dssp HHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCB
T ss_pred HHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCc
Confidence 9999999999999999999999999999999999999986 489999999876 78999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc-eEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER-TLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
++ +++|.++|++| +++||+||+|..+.++.. ..++....+..++ +++++||||.++++| ||+++++++++.
T Consensus 190 ~~---~~~l~~~~~~~-~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~ 261 (398)
T 3a2b_A 190 VN---LPELTSIANEF-DAAVMVDDAHSLGVIGHK-GAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDF 261 (398)
T ss_dssp CC---HHHHHHHHHHH-TCEEEEECTTTTTTSSGG-GCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHH
T ss_pred cC---HHHHHHHHHHc-CcEEEEECCCcccccCCC-CCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHH
Confidence 99 89999999999 999999999998776421 1222222122245 699999999999778 999999999999
Q ss_pred HHHH-HhcccCCCChHHHH-HHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 324 CNKI-QSQFTSGASSISQK-AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 324 l~~~-~~~~~~~~~~~~q~-aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
+... ......+.+.+.|. ++.++|+. .+++++++++++++++++.+.|+++ |+++..|. ++|+|+.++...
T Consensus 262 l~~~~~~~~~~~~~~~~~~a~~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~-g~~~~~~~~~~~- 334 (398)
T 3a2b_A 262 LKHNARSVMFSASMTPASVASTLKALEI----IQNEPEHIEKLWKNTDYAKAQLLDH-GFDLGATE-SPILPIFIRSNE- 334 (398)
T ss_dssp HHHHCHHHHSSBCCCHHHHHHHHHHHHH----HHHCTHHHHHHHHHHHHHHHHHHHT-TCCBCSCC-SSEEEEECCCHH-
T ss_pred HHHhcccceecCCCCHHHHHHHHHHHHH----HhhCHHHHHHHHHHHHHHHHHHHhc-CCCcCCCC-CCEEEEEcCCHH-
Confidence 8875 33334445666666 45677774 3456788999999999999999988 88887776 567899887421
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+..++.++|+++ ||.+.||..|+. ++++|++++. +++++++++++|+++++++..
T Consensus 335 ----------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~~ 394 (398)
T 3a2b_A 335 ----------KTFWVTKMLQDD-GVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAEV 394 (398)
T ss_dssp ----------HHHHHHHHHHHT-TEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC-
T ss_pred ----------HHHHHHHHHHHC-CcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 567899999887 999999998863 4799999996 999999999999999987653
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=3.2e-38 Score=320.11 Aligned_cols=335 Identities=16% Similarity=0.229 Sum_probs=264.5
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC-------CCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG-------FTRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-------~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
|+++|+|+.|.++ ++|+.+.+++.+++.+. ...|++ ..+..++++.+++++ |.. ++++|++|+|+
T Consensus 26 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~g~ 99 (420)
T 1t3i_A 26 GHPLVYLDNAATS-QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI----NAR-SPREIVYTRNA 99 (420)
T ss_dssp TEECEECBTTTCC-CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT----TCS-CGGGEEEESSH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc----CCC-CCCeEEEcCCh
Confidence 3458999999998 67889999999888652 233433 356677888888775 421 56899999999
Q ss_pred HHHHHHHHHHh----cCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 165 KQSILQAVLAV----CSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 165 ~~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
++++..+++++ +++||+|++++|+|++ +...++..|++++.++++ .++.+|++++++++++++++|++++
T Consensus 100 t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~ 177 (420)
T 1t3i_A 100 TEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKLVTVVH 177 (420)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEEEEEES
T ss_pred HHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceEEEEeC
Confidence 99999999999 8999999999999998 567778899999999986 4567999999999998999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
|+||||.+++ +++|.++|++| +++||+||+|..+.. ...+.. .+.++++.||||.+|.+| +||+++
T Consensus 178 ~~nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~~~~----~~~~~~----~~~di~~~s~sK~~~~~g--~G~~~~ 243 (420)
T 1t3i_A 178 ISNTLGCVNP---AEEIAQLAHQA-GAKVLVDACQSAPHY----PLDVQL----IDCDWLVASGHKMCAPTG--IGFLYG 243 (420)
T ss_dssp BCTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTTTTS----CCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEE
T ss_pred CcccccCcCC---HHHHHHHHHHc-CCEEEEEhhhccCCc----cCchhh----cCCCEEEEehhhhcCCCc--eEEEEE
Confidence 9999999999 89999999999 999999999986422 111211 245689999999988777 999999
Q ss_pred CHHHHHHHHHHHhc--------------------ccCCCChHHHHHHHH-HHhccCCChHHHHHHHHHHHHHHHHHHHHh
Q 012095 317 PKHFVAACNKIQSQ--------------------FTSGASSISQKAGVA-ALGLGYAGGEVVSKMVKAFRERRDFLVKSF 375 (471)
Q Consensus 317 ~~~~i~~l~~~~~~--------------------~~~~~~~~~q~aa~~-~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L 375 (471)
++++++.+...... +..+.+.+.+.++.. +++.. ...++++++++++++++++.+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L 321 (420)
T 1t3i_A 244 KEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYL--TDLGMENIHNYEVELTHYLWQGL 321 (420)
T ss_dssp CHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHHHHHHH
Confidence 99998877654321 223566777776554 45431 02246788899999999999999
Q ss_pred cCCCCCeeeCCC------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEE
Q 012095 376 GELEGVKMSEPQ------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIR 441 (471)
Q Consensus 376 ~~~~g~~~~~p~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iR 441 (471)
++++|+++..|. ++++ ++.++.. +..++.+.|. +.||.+.||..| +.++++|
T Consensus 322 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~g~~~~iR 387 (420)
T 1t3i_A 322 GQIPQLRLYGPNPKHGDRAALA-SFNVAGL------------HASDVATMVD-QDGIAIRSGHHCTQPLHRLFDASGSAR 387 (420)
T ss_dssp HTCTTEEEESCCGGGSCBCSEE-EEEETTB------------CHHHHHHHHH-TTTEECBCSCTTCHHHHHHTTCCCCEE
T ss_pred HhCCCeEEeCCCccccccCCEE-EEEECCC------------CHHHHHHHHH-HCCeEEeeccccchHHHHhcCCCCeEE
Confidence 998899887765 5665 4467632 5678887665 459999999643 4468999
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
++++. +++++++++++|++++++++
T Consensus 388 is~~~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 388 ASLYFYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred EecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 99996 89999999999999988765
No 84
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-37 Score=310.37 Aligned_cols=322 Identities=14% Similarity=0.164 Sum_probs=263.9
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC
Q 012095 108 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP 187 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p 187 (471)
+.++.+.+++.+.+. .+|++. ..++++.+++++.+.+|.+ +++++++|+|+++++..++++++++||+|++++|
T Consensus 30 ~~~~~v~~a~~~~~~---~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~ 103 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF---SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII 103 (386)
T ss_dssp CCCHHHHHHTTSCCC---CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCcHHHHHHHhcccc---cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence 346777777665432 356432 3789999999999999965 4678999999999999999999999999999999
Q ss_pred CCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh--ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 188 FWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKL--TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 188 ~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l--~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
+|++ +...++..|++++.++++. ++.+|+++|++++ .+++++|++++|+||||.+.+ +++|.++|++| ++
T Consensus 104 ~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~ 177 (386)
T 2dr1_A 104 GAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEH-DK 177 (386)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHT-TC
T ss_pred CchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHc-CC
Confidence 9998 8888999999999999864 4668999999999 468999999999999999998 89999999999 99
Q ss_pred EEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH----------------HH
Q 012095 264 LVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN----------------KI 327 (471)
Q Consensus 264 ~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~----------------~~ 327 (471)
+||+||+|..+.+. .+ +. ..+.++++.||||.++.++ ++||+++++++++.+. ..
T Consensus 178 ~li~D~a~~~~~~~----~~---~~-~~~~di~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (386)
T 2dr1_A 178 LVFVDAVSAMGGAD----IK---FD-KWGLDVVFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYL 248 (386)
T ss_dssp EEEEECTTTBTTBC----CC---TT-TTTCSEEEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHH
T ss_pred eEEEEccccccCcc----cc---cc-ccCCcEEEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhh
Confidence 99999999875431 11 22 1356799999999998553 4999999999888762 22
Q ss_pred --HhcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC---cceEEeEecCCcc
Q 012095 328 --QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYY 400 (471)
Q Consensus 328 --~~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~---~g~~~~~~~~~~~ 400 (471)
......+++.+.|.++.++|+. ..+ .+++++++++++++++.+.|+++ |+++..+. .+.++|++++..
T Consensus 249 ~~~~~~~~~~~~~~~~a~~~~l~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~- 323 (386)
T 2dr1_A 249 KEKESTPSTPPMPQVFGINVALRI---IEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPG- 323 (386)
T ss_dssp HHHSSCSSCCCHHHHHHHHHHHHH---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTT-
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCC-
Confidence 1244557888999999888875 233 37888999999999999999988 88887765 366788888742
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+..++.++|.++ ||.+.||..+..++++|++++. +++++++++++|++++++++
T Consensus 324 ----------~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 324 ----------IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp ----------CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 2678899999887 9999999877667899999994 99999999999999988764
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=2.2e-37 Score=312.04 Aligned_cols=335 Identities=16% Similarity=0.134 Sum_probs=257.8
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHcCCC-----C--CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIREGFT-----R--YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~~~~-----~--Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+++|||+.|+| .+.+++.+.+++.+++.+... . |+...+..++++.+++++ |. +++|++++|
T Consensus 41 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----~~---~~~i~~~sG- 112 (399)
T 3tqx_A 41 GEKEVLNFCANNYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL----GT---DDTILYSSC- 112 (399)
T ss_dssp TTEEEEECSSCCTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH----TC---SEEEEESCH-
T ss_pred CCeeEEEeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH----CC---CcEEEECch-
Confidence 3567899999965 334578899999888765211 1 112223456666666654 52 346666655
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPS 238 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~ 238 (471)
++++..++++++++||.|+++.|+|..+...++..|++++.++. +|++++++.+++ ++++|++++|+
T Consensus 113 t~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~ 185 (399)
T 3tqx_A 113 FDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVF 185 (399)
T ss_dssp HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEE
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCC
Confidence 67899999999999999999999999999999999999999986 377888888865 78999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccC-CCCCCceEEEecCCcccCccchhheeeEcC
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASL-PGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
||||.+++ +++|+++|++| +++||+||+|....++.... +.... ....+++++++||||.++ |.+.||++++
T Consensus 186 nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 186 SMDGIIAD---LKSICDLADKY-NALVMVDDSHAVGFIGENGR-GTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp TTTTEECC---HHHHHHHHHHT-TCEEEEECTTTTTTSSTTSC-CHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCcCC---HHHHHHHHHHc-CCEEEEECCccccccCCCCC-chHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 99999999 99999999999 99999999997433332211 22222 111356699999999997 3444999999
Q ss_pred HHHHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEe
Q 012095 318 KHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (471)
Q Consensus 318 ~~~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~ 395 (471)
+++++.+...... +..+++++.+.++.++++. ..++.++++++++++++++.+.|+++ |+++.++.++| +|+.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~ 333 (399)
T 3tqx_A 259 KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLEL---LKTEGPQLRKQLQENSRYFRAGMEKL-GFQLVPGNHPI-IPVM 333 (399)
T ss_dssp HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSSE-EEEE
T ss_pred HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHH---HhhccHHHHHHHHHHHHHHHHHHHHc-CCCcCCCCCCE-EEEE
Confidence 9999998876332 2446778888888888875 12668899999999999999999988 88887666665 7778
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
++... +..+++++|+++ ||.+.|+..+.. ++++|++++ .+++++++++++|+++++++.
T Consensus 334 ~~~~~-----------~~~~~~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 334 LGDAQ-----------LATNMADHLLQE-GIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp EECHH-----------HHHHHHHHHHHT-TEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred eCCHH-----------HHHHHHHHHHHC-CCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 76431 567899998885 999998765432 368999998 499999999999999998764
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.2e-37 Score=314.30 Aligned_cols=334 Identities=16% Similarity=0.220 Sum_probs=262.4
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC---CC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGF---TR------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~---~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
|+++++|+.|.++ +.|+.+.+++.+++.+.. .. |.+..+..++++.+++++ |.. ++++|++|+|+
T Consensus 21 g~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~~~-~~~~v~~~~g~ 94 (406)
T 1kmj_A 21 GLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI----NAR-SAEELVFVRGT 94 (406)
T ss_dssp TEECEECCTTTCC-CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT----TCS-CGGGEEEESSH
T ss_pred CCceEEecCCccC-CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc----CCC-CCCeEEEeCCh
Confidence 4568999999987 567889999999887532 11 123455667777777775 421 46899999999
Q ss_pred HHHHHHHHHHh----cCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 165 KQSILQAVLAV----CSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 165 ~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
++++..+++++ +++||+|++++|+|++. ...++..|++++.++++. ++.+|+++|++++++++++|++++
T Consensus 95 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 172 (406)
T 1kmj_A 95 TEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRLLAITH 172 (406)
T ss_dssp HHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeEEEEeC
Confidence 99999999999 89999999999998764 345778899999999863 467899999999998999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
|+||||.+++ +++|.++|++| +++||+||+|..+.. ...+.. .+.++++.||||.+|++| +||+++
T Consensus 173 ~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~g~~----~~~~~~----~~~d~~~~s~~K~~g~~G--~G~~~~ 238 (406)
T 1kmj_A 173 VSNVLGTENP---LAEMITLAHQH-GAKVLVDGAQAVMHH----PVDVQA----LDCDFYVFSGHKLYGPTG--IGILYV 238 (406)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTTTTTS----CCCHHH----HTCSEEEEEGGGTTSCTT--CEEEEE
T ss_pred CCccccCcCC---HHHHHHHHHHc-CCEEEEEchhhcCCC----CCcccc----cCCCEEEEEchhccCCCC--cEEEEE
Confidence 9999999999 99999999999 999999999986321 111111 246799999999998888 899999
Q ss_pred CHHHHHHHHHHHh---------------------cccCCCChHHHHHHH-HHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 317 PKHFVAACNKIQS---------------------QFTSGASSISQKAGV-AALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 317 ~~~~i~~l~~~~~---------------------~~~~~~~~~~q~aa~-~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
++++++.+..... .+..+.+.+.+.++. ++++.. ...++++++++++++++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~ 316 (406)
T 1kmj_A 239 KEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYV--SALGLNNIAEYEQNLMHYALSQ 316 (406)
T ss_dssp CHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHH
T ss_pred eHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHH
Confidence 9999887754321 122345667776655 555531 1235778889999999999999
Q ss_pred hcCCCCCeeeCC--CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------CCCCcEEEEe
Q 012095 375 FGELEGVKMSEP--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------GDDTCIRISY 444 (471)
Q Consensus 375 L~~~~g~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------~~~~~iRis~ 444 (471)
|++++|+++..+ .++++.| .++.. +..++.+.|.++ ||.+.||..| +.++++||++
T Consensus 317 L~~~~~~~~~~~~~~~~~~~~-~~~~~------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~g~~~~iRis~ 382 (406)
T 1kmj_A 317 LESVPDLTLYGPQNRLGVIAF-NLGKH------------HAYDVGSFLDNY-GIAVRTGHHCAMPLMAYYNVPAMCRASL 382 (406)
T ss_dssp HTTSTTEEEESCTTCCSEEEE-EETTC------------CHHHHHHHHHHT-TEECEEECTTCHHHHHHTTCSCEEEEEC
T ss_pred HhcCCCeEEecCCCcCCEEEE-EECCC------------CHHHHHHHHhhC-CcEEEeccccchHHHHhcCCCCeEEEEe
Confidence 999889998888 7887665 56532 577888877654 9999998753 4468999999
Q ss_pred ec--CHHHHHHHHHHHHHHHHhh
Q 012095 445 AA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 445 ~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+. ++++++++++.|+++++.+
T Consensus 383 ~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 383 AMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHHHHhh
Confidence 97 8999999999999998765
No 87
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.2e-37 Score=315.05 Aligned_cols=315 Identities=17% Similarity=0.176 Sum_probs=242.8
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHH-----cCCCCCCCCCCCH---HHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIR-----EGFTRYTPNAGTL---ELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~-----~~~~~Y~~~~G~~---~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..+++.|+|++.+|+.+.+++.++.. .+...|+. .|.+ +|++++++++ |. +++++++|+++++
T Consensus 20 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~----g~----~~~i~~~~g~~ai 90 (404)
T 1e5e_A 20 DQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE----KT----EACVATSSGMGAI 90 (404)
T ss_dssp CTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH----TC----SEEEEESSHHHHH
T ss_pred CCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh----CC----CcEEEeCChHHHH
Confidence 45689999999988776666655543 23456865 6666 7888888876 32 3788888889999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV 244 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~ 244 (471)
..++++++++||+|++++|+|.++.. .++..|++++.++.+ |++++++++++++++|++++|+||||.+
T Consensus 91 ~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~NptG~v 163 (404)
T 1e5e_A 91 AATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANPTLKI 163 (404)
T ss_dssp HHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCCCCcc
Confidence 99999999999999999999999888 788899999999864 7889999998899999999999999999
Q ss_pred CCHHHHHHHHHHHHh-CCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHH
Q 012095 245 YPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA 322 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~ 322 (471)
++ +++|+++|++ | +++||+||+|..+.+.. ++ . .++++++.|+||.++++|+|+ ||+++++++++
T Consensus 164 ~~---l~~i~~la~~~~-~~~li~De~~~~~~~~~----~~-~----~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~ 230 (404)
T 1e5e_A 164 ID---MERVCKDAHSQE-GVLVIADNTFCSPMITN----PV-D----FGVDVVVHSATKYINGHTDVVAGLICGKADLLQ 230 (404)
T ss_dssp CC---HHHHHHHHHTST-TCEEEEECTTTCTTTCC----GG-G----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHH
T ss_pred cC---HHHHHHHHHhhc-CCEEEEECCCchhhhCC----cc-c----cCCEEEEEcCccccCCCCCCeEEEEEECHHHHH
Confidence 98 9999999999 9 99999999999876531 11 1 357799999999999999998 99999999988
Q ss_pred -HHHHHHhcc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc--------------CCCCCeeeCC
Q 012095 323 -ACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG--------------ELEGVKMSEP 386 (471)
Q Consensus 323 -~l~~~~~~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~--------------~~~g~~~~~p 386 (471)
.+......+ +.+.+++.|.++..+|+. ....++ +..++.+.+.+.++ ++||+++..+
T Consensus 231 ~~l~~~~~~~~g~~~~~~~~~~~~~~l~~---~~~~~~----~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~ 303 (404)
T 1e5e_A 231 QIRMVGIKDITGSVISPHDAWLITRGLST---LNIRMK----AESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKK 303 (404)
T ss_dssp HHHHTCCCCCCCCCCCHHHHHHHHHHHTT---HHHHHH----HHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHhHhH---HHHHHH----HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHh
Confidence 777766555 567889999998888874 122222 22333333333333 2345555444
Q ss_pred C----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--------------------------
Q 012095 387 Q----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------------- 436 (471)
Q Consensus 387 ~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------------- 436 (471)
+ ++|+.| ++++ ..+.+..++++.|| +.+|..||.
T Consensus 304 ~~~~~g~~~~~-~~~~--------------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~ 367 (404)
T 1e5e_A 304 QMRMYGSMITF-ILKS--------------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGI 367 (404)
T ss_dssp HCSSCCSEEEE-EETT--------------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTC
T ss_pred hCCCCceEEEE-EeCC--------------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCC
Confidence 4 888777 7752 22345557777898 777765552
Q ss_pred -CCcEEEEeecCHHHHHHHHHHHHHHHHhh
Q 012095 437 -DTCIRISYAASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 -~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 465 (471)
++++|||++. |++++++++|+++++.+
T Consensus 368 ~~~~iRis~g~--e~~~~li~~l~~al~~~ 395 (404)
T 1e5e_A 368 TDGMIRLSVGI--EDADELIADFKQGLDAL 395 (404)
T ss_dssp CTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCC--CCHHHHHHHHHHHHHHH
Confidence 5799999999 78888899998888764
No 88
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=5.8e-37 Score=307.68 Aligned_cols=328 Identities=12% Similarity=0.094 Sum_probs=257.3
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-CC----CCC--CCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-GF----TRY--TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~-~~----~~Y--~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+++|||+.|++ ++++++.+.+++.+++.+ +. ..| +...+..++++.+++++ |. ++.|++++|
T Consensus 37 ~g~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~---~~~i~~~sG- 108 (384)
T 1bs0_A 37 DDRQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL----GY---SRALLFISG- 108 (384)
T ss_dssp TTEEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH----TC---SEEEEESCH-
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh----CC---CcEEEeCCc-
Confidence 4667999999985 556688899999988865 21 223 34456778888888876 43 245555555
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC---CcEEEEcCCCCCc
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK---SRLLILCSPSNPT 241 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~---~~~i~i~~p~NPt 241 (471)
++++..++++++++||.|++++|+|..+...++..|++++.+|. .|++++++++++. +++|++++|||||
T Consensus 109 t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~npt 181 (384)
T 1bs0_A 109 FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFSMD 181 (384)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCTTT
T ss_pred HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 89999999999999999999999999999999999999999984 4899999988653 6788889999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFV 321 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i 321 (471)
|.+++ +++|.++|++| +++||+||+|..+.++.........+. .+..++++||||.++++| ||++++++++
T Consensus 182 G~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~--~~~di~~~s~sK~~~~~G---G~~~~~~~~~ 252 (384)
T 1bs0_A 182 GDSAP---LAEIQQVTQQH-NGWLMVDDAHGTGVIGEQGRGSCWLQK--VKPELLVVTFGKGFGVSG---AAVLCSSTVA 252 (384)
T ss_dssp CCBCC---HHHHHHHHHHT-TCEEEEECTTTTTTSSGGGCCHHHHTT--CCCSEEEEESSSTTSSCC---EEEEECHHHH
T ss_pred CCccC---HHHHHHHHHHc-CcEEEEECCcccceecCCCCchHHhcC--CCCcEEEeeccchhhccC---cEEEeCHHHH
Confidence 99999 88999999999 999999999987655311111111122 123499999999999777 9999999999
Q ss_pred HHHHHHHhcc--cCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCC
Q 012095 322 AACNKIQSQF--TSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (471)
Q Consensus 322 ~~l~~~~~~~--~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~ 398 (471)
+.+......+ +.+++++.+.++.++|+. ..+ +.++.+++++++++++.+.|+++ |+++.++ ++.++|+.++.
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~ 327 (384)
T 1bs0_A 253 DYLLQFARHLIYSTSMPPAQAQALRASLAV---IRSDEGDARREKLAALITRFRAGVQDL-PFTLADS-CSAIQPLIVGD 327 (384)
T ss_dssp HHHHHHCHHHHSSBCCCHHHHHHHHHHHHH---HHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEECSC-CSSBCCEEEES
T ss_pred HHHHHhchhhhcCCCCCHHHHHHHHHHHHH---HhccccHHHHHHHHHHHHHHHHHHHhc-CCcccCC-CCCEEEEEeCC
Confidence 9887653222 335888999888888875 122 77889999999999999999998 8887654 45557888864
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
.. +..++.++|+++ ||.+.||..|+. ++++|++++. +++++++++++|+++
T Consensus 328 ~~-----------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 328 NS-----------RALQLAEKLRQQ-GCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HH-----------HHHHHHHHHHHT-TEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HH-----------HHHHHHHHHHHC-CcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 21 567899998876 999999988763 3689999996 899999999999864
No 89
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=5.3e-37 Score=312.75 Aligned_cols=339 Identities=16% Similarity=0.165 Sum_probs=262.9
Q ss_pred cCCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-C--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-G--FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~-~--~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+++|+|+.|++ ++.+++.+.+++.+++.+ + ...|....|..++.+.+++.+.+.+|. ++.++++++++++
T Consensus 62 ~g~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g~----~~~i~~~sGs~a~ 137 (427)
T 2w8t_A 62 RGKDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYGT----TGAIVFSTGYMAN 137 (427)
T ss_dssp TTEEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESCHHHHH
T ss_pred CCceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhCC----CceEEecCcHHHH
Confidence 4677999999985 545678899999988865 3 233444455544444455555544563 2455556666788
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----CCcEEEEcCCCCCcccC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----KSRLLILCSPSNPTGSV 244 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPtG~~ 244 (471)
..++.+++++||.|+++.|+|.++...++..|++++.++. +|+++|++++++ ++++|++++++||||.+
T Consensus 138 ~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~ 210 (427)
T 2w8t_A 138 LGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDI 210 (427)
T ss_dssp HHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCc
Confidence 8899999999999999999999999999999999998874 499999999876 78899999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc-CCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
++ +++|.++|++| |++||+||+|..+.++.... .+.. +....+.++++.||||.+|++| ||+++++++++.
T Consensus 211 ~~---l~~l~~l~~~~-g~~li~Dea~~~~~~~~~g~-~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~~l~~~ 282 (427)
T 2w8t_A 211 AP---LKEMVAVAKKH-GAMVLVDEAHSMGFFGPNGR-GVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNHPKFEA 282 (427)
T ss_dssp CC---HHHHHHHHHHT-TCEEEEECTTTTTTSSTTSC-CHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECCTTGGG
T ss_pred cC---HHHHHHHHHHc-CCEEEEECCccccccCCCCC-chHhhcCCCcCCcEEEecchhhhccCC---CEEEeCHHHHHH
Confidence 99 99999999999 99999999999987753222 2222 2212356899999999999777 999999998887
Q ss_pred HHHHHh--cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEecCCcc
Q 012095 324 CNKIQS--QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYY 400 (471)
Q Consensus 324 l~~~~~--~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~~~~~ 400 (471)
+..... .++.+.+++.+.++.++|+. .+.+++++++++++++++.+.|+++ |+.+. ++..+.++|+.+++.
T Consensus 283 l~~~~~~~~~~~~~~~~~~aa~~~al~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~- 356 (427)
T 2w8t_A 283 VRLACRPYIFTASLPPSVVATATTSIRK----LMTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLEDQ- 356 (427)
T ss_dssp GGGTCHHHHSSCCCCHHHHHHHHHHHHH----HTSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESSH-
T ss_pred HHHhcccccccCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECCH-
Confidence 765421 23445677777777778875 2235678889999999999999988 88876 451445688888742
Q ss_pred CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 401 GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+..+++++|+++ ||.+.||..|+.+ +++|++++. +++++++++++|+++++++..
T Consensus 357 ----------~~~~~l~~~L~~~-Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 357 ----------EQAAMMWQALLDG-GLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp ----------HHHHHHHHHHHHT-TEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred ----------HHHHHHHHHHHHC-CeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 1467899998887 9999999887643 589999997 999999999999999987653
No 90
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-37 Score=313.22 Aligned_cols=320 Identities=14% Similarity=0.149 Sum_probs=260.7
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
.++|+.+.+++.+.+. ..|++ ...++++.+++++.+.+|. +++ +|++|+|+++++..++++++++||+|+++
T Consensus 43 ~~~~~~v~~a~~~~~~---~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 43 SNAHPSVLQAMNVSPV---GHLDP--AFLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCCHHHHHHHSSCCC---CTTSH--HHHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHHhcccc---cccCH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 3557778887776542 25644 2568999999999999885 567 99999999999999999999999999999
Q ss_pred CCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 186 APFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 186 ~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
+|+|.+ +...++..|++++.++++. ++.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++| +
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~ 189 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREF-G 189 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-T
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHc-C
Confidence 999998 8889999999999999864 466899999999988 8999999999999999998 88999999999 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH----H----------
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI----Q---------- 328 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~----~---------- 328 (471)
++||+||+|.. +.... .+. ..+..+++.|+||.++.+| |+||+++++++++.+... .
T Consensus 190 ~~li~Dea~~~----g~~~~---~~~-~~~~di~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (393)
T 1vjo_A 190 TLLLVDTVTSL----GGVPI---FLD-AWGVDLAYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLG 260 (393)
T ss_dssp CEEEEECTTTT----TTSCC---CTT-TTTCSEEECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHH
T ss_pred CEEEEECCccc----cCcCC---ccc-ccCccEEEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhh
Confidence 99999999983 11111 222 2456799999999998777 999999999998877432 0
Q ss_pred -----hcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc---ceEEeEecCCc
Q 012095 329 -----SQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTY 399 (471)
Q Consensus 329 -----~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~---g~~~~~~~~~~ 399 (471)
..... +++.+.|.++.++|+.. .+.++++++++++++++++.+.|+++ |+++..|.+ +.++++.++..
T Consensus 261 ~~~~~~~~~~g~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~ 337 (393)
T 1vjo_A 261 KYWGSERVYHHTAPINLYYALREALRLI--AQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDG 337 (393)
T ss_dssp HHHSTTCCCCSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTT
T ss_pred hhhccCCCCCCCCCHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCC
Confidence 01223 67889999999888751 12357889999999999999999988 888877765 34577777642
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-e--cCHHHHHHHHHHHHHHH
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-A--ASLTTLQAAVERIKKGL 462 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~--~~~e~i~~~~~~l~~~l 462 (471)
.+..++.+.|++++||.+.||..|..++++|+++ + .+++++++++++|++++
T Consensus 338 -----------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 338 -----------VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp -----------CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred -----------CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 2678899998876699999999887789999994 3 37778999999999876
No 91
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=1.2e-36 Score=307.14 Aligned_cols=332 Identities=17% Similarity=0.166 Sum_probs=262.4
Q ss_pred cCCCeEEcCCCCCCCC--ChHHHHHHHHHHHHc-CCC----CCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 93 AGVSVIRLAAGEPDFD--TPVLIAEAGINAIRE-GFT----RYT--PNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~--~p~~v~~a~~~~~~~-~~~----~Y~--~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
.|+++|||+.|.| ++ +++.+.+++.+++.. +.. .|. ...+..++++.+++++ |. + ++|++++|
T Consensus 43 ~g~~~id~~~~~~-~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~----g~--~-~~i~~~sG 114 (401)
T 1fc4_A 43 DGSHVINFCANNY-LGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL----GM--E-DAILYSSC 114 (401)
T ss_dssp TSCEEEECCCSCT-TSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH----TC--S-EEEEESCH
T ss_pred CCccEEEeeccCc-ccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh----CC--C-cEEEeCCh
Confidence 5778999999965 54 478899999988765 221 221 1455678888888876 43 3 56666655
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCC
Q 012095 164 AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSP 237 (471)
Q Consensus 164 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p 237 (471)
++++..++++++++||.|+++.|+|..+...++..|++++.++. .|++++++++++ ++++|++++|
T Consensus 115 -s~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~ 186 (401)
T 1fc4_A 115 -FDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGV 186 (401)
T ss_dssp -HHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESE
T ss_pred -HHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCC
Confidence 66888899999999999999999999888889999999998873 488999998865 7899999999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC-cccc-CCCCccccccCCCCCCceEEEecCCccc-Cccchhheee
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIY-APATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYI 314 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~-~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v 314 (471)
+||||.+++ +++|.++|++| +++||+||+|. ++.+ .+....+...+. .+.+++++||||.+ |++| ||+
T Consensus 187 ~nptG~~~~---~~~i~~l~~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~--~~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 187 FSMDGVIAN---LKGVCDLADKY-DALVMVDDSHAVGFVGENGRGSHEYCDVM--GRVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp ETTTTEECC---HHHHHHHHHHT-TEEEEEECTTTTTTSSTTSCCHHHHTTCT--TCCSEEEEESSSTTCSSSC---EEE
T ss_pred cCCCCCCCC---HHHHHHHHHHc-CCEEEEECcccccccCCCCCccHHHcCCC--cCCcEEEecchhhccCCCC---EEE
Confidence 999999999 99999999999 99999999996 6653 333222223332 25679999999999 6565 999
Q ss_pred EcCHHHHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEE
Q 012095 315 AGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYL 392 (471)
Q Consensus 315 ~~~~~~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~ 392 (471)
++++++++.+...... ++.+++.+.+.++.++|+. .+..++.+++++++++++.+.|+++ |+++. +..++++
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 331 (401)
T 1fc4_A 258 AARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEM----VEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAII 331 (401)
T ss_dssp EECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHH----HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEE
T ss_pred EcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEE
Confidence 9999999988875422 3557899999999988875 2224678888999999999999988 88877 4566678
Q ss_pred eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
|+++++.. +..++.+.|.++ ||.+.+|..|+.+ +++|++++. +++++++++++|++++++++.
T Consensus 332 ~~~~~~~~-----------~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 399 (401)
T 1fc4_A 332 PVMLGDAV-----------VAQKFARELQKE-GIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLGV 399 (401)
T ss_dssp EEEEECHH-----------HHHHHHHHHHHT-TEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCChH-----------HHHHHHHHHHHC-CcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 88886421 467889988876 9999999887643 589999983 899999999999999988754
No 92
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=4.7e-37 Score=307.66 Aligned_cols=330 Identities=18% Similarity=0.171 Sum_probs=252.9
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHHcCCCC--------CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 98 IRLAAGEPDFDTPVLIAEAGINAIREGFTR--------YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~--------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
+.|..+.+. ++|+.+.+++.+++.+.... |.+..+..++++.+++++ | +++++|++|+|+++++.
T Consensus 3 ~yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a~~ 75 (384)
T 1eg5_A 3 VYFDNNATT-RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL----G--VSPSEIFFTSCATESIN 75 (384)
T ss_dssp EECBTTTCC-CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH----T--SCGGGEEEESCHHHHHH
T ss_pred EEEecCccC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc----C--CCCCeEEEECCHHHHHH
Confidence 567777665 56889999999988752110 212344567777777776 4 46789999999999999
Q ss_pred HHHHHhc----CCCCeEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcc
Q 012095 170 QAVLAVC----SPGDEVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (471)
Q Consensus 170 ~~~~~l~----~~gd~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG 242 (471)
.++++++ ++||+|++++|+|+++...+ +..|++++.++++. ++.+|+++|++++++++++|++++|+||||
T Consensus 76 ~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 76 WILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVG 153 (384)
T ss_dssp HHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTC
T ss_pred HHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcc
Confidence 9999998 79999999999999887655 77899999999863 467999999999988899999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCC--eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 243 SVYPKNLLDEIARIVAKHPR--LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~--~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
.+++ +++|.++|++| + ++||+||+|.. +. .... +.. .+.++++.|+||.+|++| +||+++++++
T Consensus 154 ~~~~---~~~i~~l~~~~-~~~~~li~Dea~~~---~~-~~~~---~~~-~~~di~~~s~sK~~g~~G--~G~~~~~~~~ 219 (384)
T 1eg5_A 154 TIQP---VEDVTRIVKKK-NKETLVHVDAVQTI---GK-IPFS---LEK-LEVDYASFSAHKFHGPKG--VGITYIRKGV 219 (384)
T ss_dssp BBCC---HHHHHHHHHHH-CTTCEEEEECTTTT---TT-SCCC---CTT-TCCSEEEEEGGGGTSCTT--CEEEEECTTS
T ss_pred cccC---HHHHHHHHHhc-CCceEEEEEhhhhc---CC-cccC---chh-cCCCEEEecHHHhcCCCc--eEEEEEcCCC
Confidence 9999 88999999999 8 99999999973 21 1112 222 256799999999999888 8999998875
Q ss_pred --HHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-c--ceEE
Q 012095 321 --VAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-G--AFYL 392 (471)
Q Consensus 321 --i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~--g~~~ 392 (471)
...+... ......+++.+.|.++.++|+. ..+++++++++++++++++.+.|++ +|+++..+. + +.++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~ 295 (384)
T 1eg5_A 220 PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI---AVEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTL 295 (384)
T ss_dssp CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH---HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEE
T ss_pred ccccccccCcccccccCCCCChHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEE
Confidence 2222111 1123456889999998888875 2467889999999999999999998 588886553 2 2346
Q ss_pred eEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEee--cCHHHH
Q 012095 393 FIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYA--ASLTTL 451 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~--~~~e~i 451 (471)
++.+++. +..++.+.|.+ +||.+.+|..|+. ++++||+++ .+++++
T Consensus 296 ~~~~~~~------------~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i 362 (384)
T 1eg5_A 296 SVSFPNI------------RGSTLQNLLSG-YGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEV 362 (384)
T ss_dssp EEECTTC------------CHHHHHHHHHH-TTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHH
T ss_pred EEEeCCC------------CHHHHHHHHhh-CCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHH
Confidence 6666532 67789988765 5999999987743 368999999 489999
Q ss_pred HHHHHHHHHHHHhhCC
Q 012095 452 QAAVERIKKGLLTLRP 467 (471)
Q Consensus 452 ~~~~~~l~~~l~~~~~ 467 (471)
++++++|++++++++.
T Consensus 363 ~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 363 DYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988754
No 93
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=2.2e-37 Score=312.64 Aligned_cols=335 Identities=15% Similarity=0.132 Sum_probs=257.3
Q ss_pred CCCeEEcCCCCC-CCCChHHHHHHHHHHHHc-CC------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 94 GVSVIRLAAGEP-DFDTPVLIAEAGINAIRE-GF------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 94 g~~~i~l~~g~~-~~~~p~~v~~a~~~~~~~-~~------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
|++++++..|++ .+++++.+.+++.+++.+ +. ..|+...+..++|+.+++++ | .+++|++|+|++
T Consensus 45 g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~---~~~~i~~~sG~~ 117 (401)
T 2bwn_A 45 KQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH----Q---KEAALVFSSAYN 117 (401)
T ss_dssp EEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT----T---CSEEEEESCHHH
T ss_pred CCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh----C---CCcEEEECCcHH
Confidence 566899988876 565667899999988865 21 23445557788888888886 3 257888888877
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----cCCcEEEEcCCCC
Q 012095 166 QSILQAVLAVC--SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT----EKSRLLILCSPSN 239 (471)
Q Consensus 166 ~al~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~----~~~~~i~i~~p~N 239 (471)
++..++..++ .+||.|+++.|+|+++...++..|++++.++.+ |++++++.++ +++++|++++|+|
T Consensus 118 -a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~~~n 189 (401)
T 2bwn_A 118 -ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFESVYS 189 (401)
T ss_dssp -HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEESBCT
T ss_pred -HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEecCcC
Confidence 6666666553 599999999999999999999999999999863 7888888876 5789999999999
Q ss_pred CcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH
Q 012095 240 PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (471)
Q Consensus 240 PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~ 319 (471)
|||.+++ +++|+++|++| +++||+||+|..+.+++.+...+.......+.+++++||||.+|++| ||++++++
T Consensus 190 ptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~~~ 262 (401)
T 2bwn_A 190 MDGDFGP---IKEICDIAEEF-GALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAASAR 262 (401)
T ss_dssp TTCCBCC---HHHHHHHHHHH-TCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEECHH
T ss_pred CCCCcCC---HHHHHHHHHHc-CCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecCHH
Confidence 9999999 89999999999 99999999999665543221111111111234699999999999888 99999999
Q ss_pred HHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecC
Q 012095 320 FVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 320 ~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~ 397 (471)
+++.+...... +..+.+++.+.++.++++.. ....+++++++++++++++.+.|+++ |+++..+.++ ++|+.++
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~ 338 (401)
T 2bwn_A 263 MVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFL--KTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIIDHGSH-IVPVVIG 338 (401)
T ss_dssp HHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSSS-CEEEECC
T ss_pred HHHHHHHhCcCceecCCCCHHHHHHHHHHHHHH--HhcccHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCC-eEEEEeC
Confidence 99888754332 23345568888888888641 12235788899999999999999988 8888877777 5788886
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC---CcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD---TCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~---~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
... +..++.+.|++++||.+.|+..|+.+ +++|++++. +++++++++++|+++++++
T Consensus 339 ~~~-----------~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 339 DPV-----------HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp CHH-----------HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred ChH-----------HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 421 46788988875569999999887643 589999995 8999999999999987654
No 94
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=2.5e-36 Score=305.86 Aligned_cols=332 Identities=17% Similarity=0.125 Sum_probs=254.1
Q ss_pred cCCCeEEcCCCC-CCCCChHHHHHHHHHHHHcC---CCCCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE-PDFDTPVLIAEAGINAIREG---FTRYTPNAG----TLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~-~~~~~p~~v~~a~~~~~~~~---~~~Y~~~~G----~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+.+|||+.++ .++++++.+.+++.+++.+. ...|....| ..++++.++++ +|. +..++++++
T Consensus 57 ~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~----~g~----~~~i~~~sG 128 (409)
T 3kki_A 57 ASPDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKF----TGF----DECLLSQSG 128 (409)
T ss_dssp CCTTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHH----HTC----SEEEEESCH
T ss_pred CCCceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHH----hCC----CeEEEecch
Confidence 467799999887 44667899999999998762 222323334 44555555555 453 234455555
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCccc
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 243 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~ 243 (471)
++++..++++++++||.|++++|+|.++...++..|++++.++. .|+++|++++++ ++++|++++|+||||.
T Consensus 129 t~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~nptG~ 201 (409)
T 3kki_A 129 WNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYSTLGT 201 (409)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTTTCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCCCCC
Confidence 79999999999999999999999999999999999999988874 489999999975 5899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
+++ +++|+++|++| |++||+||+|..+.++..............+..+++.||||.++++| ||+++++++++.
T Consensus 202 ~~~---l~~l~~la~~~-~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~~~~~~ 274 (409)
T 3kki_A 202 IAP---LAELVNISKEF-GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNNEVNRC 274 (409)
T ss_dssp BCC---HHHHHHHHHHH-TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESSSGGGT
T ss_pred cCC---HHHHHHHHHHc-CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECHHHHHH
Confidence 999 99999999999 99999999999865543222111112222345699999999999665 999999999888
Q ss_pred HHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC
Q 012095 324 CNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG 401 (471)
Q Consensus 324 l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~ 401 (471)
+...... +..+.+++.+.++.++++. .+..++++++++++++++.+.|+++ |+.+. .+++++|+.++...
T Consensus 275 ~~~~~~~~~~~~~~~~~~~aa~~aal~~----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~~- 346 (409)
T 3kki_A 275 VPFISYPAIFSSTLLPYEAAGLETTLEI----IESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDER- 346 (409)
T ss_dssp HHHHCHHHHHSBCCCHHHHHHHHHHHHH----HHHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESHH-
T ss_pred HHHhCcCccccCCCcHHHHHHHHHHHHH----HhcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCHH-
Confidence 7764332 2334667777777777774 2333678889999999999999998 77765 35667888886431
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC---CCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD---DTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~---~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+..++++.|+++ ||.+.|+..+.. ++++|++++. +++++++++++|+++++..
T Consensus 347 ----------~~~~~~~~L~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 347 ----------NTEKVRDYLESN-GVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp ----------HHHHHHHHHHHT-TEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred ----------HHHHHHHHHHHC-CceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 466789998887 999988664432 4699999985 8999999999999999764
No 95
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.1e-36 Score=305.70 Aligned_cols=328 Identities=18% Similarity=0.154 Sum_probs=253.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC----C---CCCC-CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF----T---RYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~----~---~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
+.++|+.|.+. +.|+.+.+++.+++.... . .|.. ..+..++++.+++++ | +++++|++|+|++++
T Consensus 16 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a 88 (390)
T 1elu_A 16 NKTYFNFGGQG-ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF----N--VDPNTITITDNVTTG 88 (390)
T ss_dssp TSEECCTTTCC-CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT----T--SCGGGEEEESSHHHH
T ss_pred CeEEecCCccC-CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc----C--CCHHHEEEeCChHHH
Confidence 47899988754 457789999888776421 1 3422 256778888888875 4 466799999999999
Q ss_pred HHHHHHHh-cCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcc
Q 012095 168 ILQAVLAV-CSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTG 242 (471)
Q Consensus 168 l~~~~~~l-~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG 242 (471)
+..+++++ +++||+|++++|+|+++... ++..|++++.++++.++++.+|++.|++++++++++|++++|+||||
T Consensus 89 ~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 168 (390)
T 1elu_A 89 CDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHLLWNTG 168 (390)
T ss_dssp HHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESBCTTTC
T ss_pred HHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEeccccCCc
Confidence 99999999 89999999999999997653 56789999999986545678999999999988899999999999999
Q ss_pred cCCCHHHHHHHHHHHH----hCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 243 SVYPKNLLDEIARIVA----KHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~----~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
.+++ +++|.++|+ +| +++||+||+|... .... .+. ..+..+++.|+||.+. +|.++||+++++
T Consensus 169 ~~~~---~~~i~~l~~~~~~~~-~~~li~Dea~~~g----~~~~---~~~-~~~~d~~~~s~~K~~~-~~~g~G~~~~~~ 235 (390)
T 1elu_A 169 QVLP---LAEIMAVCRRHQGNY-PVRVLVDGAQSAG----SLPL---DFS-RLEVDYYAFTGHKWFA-GPAGVGGLYIHG 235 (390)
T ss_dssp CBCC---HHHHHHHHHHCCSSS-CCEEEEECTTTBT----TBCC---CTT-TSCCSEEEEESSSTTC-CCTTCEEEEECT
T ss_pred eecC---HHHHHHHHhhhhhhc-CcEEEEEcccccC----CcCC---Chh-hcCCCEEEcccccccc-CCCceEEEEECH
Confidence 9999 889999999 99 9999999999852 1111 121 1356699999999543 677899999999
Q ss_pred HHHHHHHHH----------------------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 319 HFVAACNKI----------------------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 319 ~~i~~l~~~----------------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
++++.+... ......+++.+.+.++.++++... ...++++++++++++++++.+.|+
T Consensus 236 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~-~~~~~~~~~~~~~~~~~~l~~~L~ 314 (390)
T 1elu_A 236 DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQ-RQGTAEERYQAICQRSEFLWRGLN 314 (390)
T ss_dssp TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHHH
Confidence 888776532 111233466777777766665310 023488899999999999999999
Q ss_pred CCCCCeeeC---CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHH
Q 012095 377 ELEGVKMSE---PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTL 451 (471)
Q Consensus 377 ~~~g~~~~~---p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i 451 (471)
+++|+++.. +.++|+.| +++.. .+..++.++|.++ ||.+.+|. .++++||+++ .+++++
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~~~~l~~~-gi~v~~~~---~~~~iRis~~~~~~~~~i 378 (390)
T 1elu_A 315 QLPHVHCLATSAPQAGLVSF-TVDSP-----------LGHRAIVQKLEEQ-RIYLRTIA---DPDCIRACCHYITDEEEI 378 (390)
T ss_dssp HSTTEEESCSSCCSSSEEEE-EECSS-----------SCHHHHHHHHHHT-TEECEEET---TTTEEEEECCTTCCHHHH
T ss_pred hcCCcEEecCccccccEEEE-EcCCC-----------CCHHHHHHHHHHC-CEEEEecC---CCCeEEEecccCCCHHHH
Confidence 988888874 46777655 77632 2678899988655 99999986 3579999986 489999
Q ss_pred HHHHHHHHH
Q 012095 452 QAAVERIKK 460 (471)
Q Consensus 452 ~~~~~~l~~ 460 (471)
++++++|++
T Consensus 379 ~~~~~~l~~ 387 (390)
T 1elu_A 379 NHLLARLAD 387 (390)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999998865
No 96
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.3e-37 Score=310.49 Aligned_cols=326 Identities=12% Similarity=0.093 Sum_probs=251.7
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcC---------CCCCCCCCCCHHHHHH-HHHHHHHHhCCCCCCCcEEEeCC
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREG---------FTRYTPNAGTLELRSA-ICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~---------~~~Y~~~~G~~~lr~~-ia~~~~~~~g~~~~~~~i~it~G 163 (471)
.+++++|..|.+..++|+.+.+++.+.+... ...|.+..+..++++. +++++ |. + +|++|+|
T Consensus 6 ~~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~----~~--~--~v~~~~g 77 (371)
T 2e7j_A 6 TKDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL----GC--D--VARVTNG 77 (371)
T ss_dssp --CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT----TS--S--EEEEESS
T ss_pred CCCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc----CC--C--EEEEeCC
Confidence 3468999998877778899999998877542 1235577888999999 99886 32 2 9999999
Q ss_pred hHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEec--CCCCCCCcCCHHHHHhhhc-----cCCcEEEEcC
Q 012095 164 AKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP--TRISENFLLDPKVLESKLT-----EKSRLLILCS 236 (471)
Q Consensus 164 ~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~--~~~~~~~~ld~e~l~~~l~-----~~~~~i~i~~ 236 (471)
+++++..++++++++||+|++++|+|+++...++..|++++.++ ++ .++.+|+++|+++++ +++++|++++
T Consensus 78 ~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 78 AREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 99999999999999999999999999999999999999999999 64 347799999999997 6889999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
|+||||.+++ +++|.++|++| |++||+||+|..+... ..+..+ +..+++.||||.++ +|.|+||+++
T Consensus 156 ~~nptG~~~~---~~~i~~~~~~~-~~~li~D~a~~~~~~~----~~~~~~----~~di~~~s~sK~~~-~~~~~G~~~~ 222 (371)
T 2e7j_A 156 PDGNYGNLPD---VKKIAKVCSEY-DVPLLVNGAYAIGRMP----VSLKEI----GADFIVGSGHKSMA-ASGPIGVMGM 222 (371)
T ss_dssp SCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTTBTTBC----CCHHHH----TCSEEEEEHHHHSS-CCSSCEEEEE
T ss_pred CCCCCcccCC---HHHHHHHHHHc-CCeEEEECccccCCCC----CChhhc----CCCEEEecCCcCCC-CCCCcEEEEE
Confidence 9999999999 79999999999 9999999999975431 122222 34499999999998 4569999999
Q ss_pred CHHHHHH-HHHHHh--cc-----cCCCChHHHHHHHHHHhccCCChHHHHHHHHHH--HHHHHHHHHHhcCCCCCeeeCC
Q 012095 317 PKHFVAA-CNKIQS--QF-----TSGASSISQKAGVAALGLGYAGGEVVSKMVKAF--RERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 317 ~~~~i~~-l~~~~~--~~-----~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~--~~~r~~l~~~L~~~~g~~~~~p 386 (471)
++++++. +..... .. ..+++...+.++.++++. ... +..+++ +++++++.+.|+++ |+++..|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~---~~~---~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 295 (371)
T 2e7j_A 223 KEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPH---VRE---RIKRWDEEVEKARRFAAEMEKL-GIKQLGD 295 (371)
T ss_dssp CTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHH---HHH---HGGGHHHHHHHHHHHHHHHHHT-TCEEESS
T ss_pred echhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHH---HHH---HHHHHHHHHHHHHHHHHHHHHc-CcEEecC
Confidence 9988776 654332 11 234556656666666653 111 566677 88899999999888 8888766
Q ss_pred C--cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC------CCcEE-EEee---cCHHHHHHH
Q 012095 387 Q--GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------DTCIR-ISYA---ASLTTLQAA 454 (471)
Q Consensus 387 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~------~~~iR-is~~---~~~e~i~~~ 454 (471)
. .+.++|++++ +..++.+.|. ++||.+.| ..|.. ++++| ++++ .++++++++
T Consensus 296 ~~~~~~~~~~~~~--------------~~~~~~~~l~-~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~ 359 (371)
T 2e7j_A 296 NPHNHDLMFFHAE--------------VLYEISKKAK-GGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYV 359 (371)
T ss_dssp SSCCSSEEEEECH--------------HHHHHHHHSS-SGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHHH
T ss_pred CCccCceEEEECC--------------CHHHHHHHHH-HCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHHH
Confidence 3 2446888875 2567888877 45999988 43322 67999 9999 589999999
Q ss_pred HHHHHHHHHhh
Q 012095 455 VERIKKGLLTL 465 (471)
Q Consensus 455 ~~~l~~~l~~~ 465 (471)
+++|+++++++
T Consensus 360 ~~~l~~~~~~~ 370 (371)
T 2e7j_A 360 LNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999998765
No 97
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=5.8e-36 Score=301.12 Aligned_cols=332 Identities=14% Similarity=0.147 Sum_probs=253.5
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP--NAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAV 172 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~ 172 (471)
..+.+..|. +++|+.+.+++.+++.. .|.+ ..+..++++.++++ +|. +++ +|++|+|+++++..++
T Consensus 19 ~~~~~~~g~--~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~----~g~--~~~~~i~~~~g~t~a~~~~~ 87 (393)
T 2huf_A 19 NKLLMGPGP--SNAPQRVLDAMSRPILG---HLHPETLKIMDDIKEGVRYL----FQT--NNIATFCLSASGHGGMEATL 87 (393)
T ss_dssp CCEECSSSC--CCCCHHHHHHTTSCCCC---TTSHHHHHHHHHHHHHHHHH----HTC--CCSEEEEESSCHHHHHHHHH
T ss_pred CeEEecCCC--CCCCHHHHHHHHhhhcc---CCCHHHHHHHHHHHHHHHHH----hCC--CCCcEEEEcCcHHHHHHHHH
Confidence 456666663 55678888887765432 3432 23445566666655 453 454 8999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHH
Q 012095 173 LAVCSPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
++++++||+|++++|+|+++. ..++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++
T Consensus 88 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~--- 162 (393)
T 2huf_A 88 CNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQG--- 162 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---
T ss_pred HHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCccccCC---
Confidence 999999999999999998743 34566899999999864 356899999999987 8999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc-cCccchhheeeEcCHHHHHHHHHHH
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA-FAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
+++|.++|++| +++||+||+|... .... .+. ..+..+++.|+||. +|++|+ ||+++++++++.+....
T Consensus 163 l~~i~~~~~~~-~~~li~D~a~~~~----~~~~---~~~-~~~~d~~~~s~sK~l~g~~G~--G~~~~~~~~~~~~~~~~ 231 (393)
T 2huf_A 163 LEGVGALCHQH-NCLLIVDTVASLG----GAPM---FMD-RWEIDAMYTGSQKVLGAPPGI--TPVSFSHRAVERYKRRN 231 (393)
T ss_dssp CTTHHHHHHHT-TCEEEEECTTTBT----TBCC---CTT-TTTCSEEECCSSSTTCCCSSC--EEEEECHHHHHHHHTCS
T ss_pred HHHHHHHHHHc-CCEEEEEcccccC----CCCc---chh-hcCccEEEECCCcccccCCCe--EEEEECHHHHHHHhhcC
Confidence 88999999999 9999999998642 1111 122 13567999999997 467786 99999999998876541
Q ss_pred ---hc--------------------ccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 329 ---SQ--------------------FTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 329 ---~~--------------------~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
.. ...+++...+.++.++++. ..+ .+++.+++++++++++.+.|+++ |+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 307 (393)
T 2huf_A 232 TKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAM---ACEEGLPALIARHEDCAKRLYRGLQDA-GFELY 307 (393)
T ss_dssp SCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred CCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 01 1124566666666667764 223 37888899999999999999988 88877
Q ss_pred CCC---cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-e--cCHHHHHHHHHHH
Q 012095 385 EPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-A--ASLTTLQAAVERI 458 (471)
Q Consensus 385 ~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~--~~~e~i~~~~~~l 458 (471)
.+. ++++++++++.. .+..++.++|++++||.+.+|..|..++++|+++ + .+++++++++++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l 376 (393)
T 2huf_A 308 ADPKDRLSTVTTIKVPQG-----------VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVF 376 (393)
T ss_dssp SCGGGBCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred cCccccCCcEEEEEcCCC-----------CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHHHHHHH
Confidence 663 355678888632 2678899998876799999998877778999999 5 2688999999999
Q ss_pred HHHHHhhCCCC
Q 012095 459 KKGLLTLRPGV 469 (471)
Q Consensus 459 ~~~l~~~~~~~ 469 (471)
++++++++.++
T Consensus 377 ~~~~~~~~~~~ 387 (393)
T 2huf_A 377 QEAVAAVKPDV 387 (393)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHHcCCCc
Confidence 99999887654
No 98
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=9.8e-37 Score=310.29 Aligned_cols=348 Identities=11% Similarity=0.080 Sum_probs=251.7
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGF---TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
.|+.+||++.|.+ +++ +++.+.+++.+++.... ..|++..+..+|++.|++++. | + .+++|++|+|+++
T Consensus 39 ~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~~ 113 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGSE 113 (426)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHHH
T ss_pred CCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchHH
Confidence 4677999998874 444 57889999999876532 246677888999999999862 3 2 3489999999999
Q ss_pred HHHHHHH---HhcCCCCeEEEcCCCCCChH-HHHHHcCCE-------------EEEecCCC---CCCCcCCHHHHHhhhc
Q 012095 167 SILQAVL---AVCSPGDEVIIPAPFWVSYP-EMARIADAT-------------PVILPTRI---SENFLLDPKVLESKLT 226 (471)
Q Consensus 167 al~~~~~---~l~~~gd~Vlv~~p~y~~~~-~~~~~~G~~-------------~~~v~~~~---~~~~~ld~e~l~~~l~ 226 (471)
++..+++ .++++| .|++++|+|+++. ..+...|.+ ++.++++. ..++.+|+++|+++++
T Consensus 114 a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~ 192 (426)
T 1sff_A 114 AVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFK 192 (426)
T ss_dssp HHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHH
Confidence 9999988 677777 8999999998765 456666653 66777653 1234579999999886
Q ss_pred -----cCCcEEEE-cCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 227 -----EKSRLLIL-CSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 227 -----~~~~~i~i-~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
+++++|++ ++++| || .+++++++++|.++|++| +++||+||+|.++.+.+.. ..+ .. .+..+.+.|
T Consensus 193 ~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~-~~~-~~---~~~~~di~s 265 (426)
T 1sff_A 193 NDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEH-GIMLIADEVQSGAGRTGTL-FAM-EQ---MGVAPDLTT 265 (426)
T ss_dssp HTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGG-GG---TTSCCSEEE
T ss_pred hccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHc-CCEEEEechhhccCcccch-hhh-hh---cCCCCCEEE
Confidence 45677766 45688 99 889999999999999999 9999999999987655421 111 11 122233559
Q ss_pred CCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC--
Q 012095 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 377 (471)
Q Consensus 300 ~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-- 377 (471)
|||.++. |+|+||+++++++++.+.......+++.++++|.++.++|+.. .+ ....++++++++++.+.|++
T Consensus 266 ~sK~~~~-GlriG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~~~l~~~~ 339 (426)
T 1sff_A 266 FAKSIAG-GFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVF---EQ--ENLLQKANDLGQKLKDGLLAIA 339 (426)
T ss_dssp ECGGGGT-SSCCEEEEEEHHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHH
T ss_pred EcccccC-CCceEEEEEcHHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHH---Hh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 9999999999998887764334456678999999999888641 11 12344555556666555544
Q ss_pred --CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHH
Q 012095 378 --LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQA 453 (471)
Q Consensus 378 --~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~ 453 (471)
++.+....+. |+|+|++++........ ...+..++++.|+++ ||.+.||..| ++++|++++ .+++++++
T Consensus 340 ~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~-gi~v~~~~~~--~~~iRi~~~~~~~~~~i~~ 412 (426)
T 1sff_A 340 EKHPEIGDVRGL-GAMIAIELFEDGDHNKP---DAKLTAEIVARARDK-GLILLSCGPY--YNVLRILVPLTIEDAQIRQ 412 (426)
T ss_dssp HTCTTEEEEEEE-TTEEEEEEBGGGCTTSB---CHHHHHHHHHHHHHT-TEECEEESTT--SCEEEECCCTTCCHHHHHH
T ss_pred HhCCCeEEEEEE-EEEEEEEEecCccccCC---ChHHHHHHHHHHHHC-CcEEecCCCC--CCEEEEECCccCCHHHHHH
Confidence 3334444455 56789988531000000 001467788888875 9999998864 679999986 39999999
Q ss_pred HHHHHHHHHHhhC
Q 012095 454 AVERIKKGLLTLR 466 (471)
Q Consensus 454 ~~~~l~~~l~~~~ 466 (471)
++++|++++++++
T Consensus 413 ~~~~l~~~l~~~~ 425 (426)
T 1sff_A 413 GLEIISQCFDEAK 425 (426)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998764
No 99
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=2.8e-36 Score=303.69 Aligned_cols=330 Identities=14% Similarity=0.137 Sum_probs=255.6
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHHHHHHHHHhc
Q 012095 100 LAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 100 l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~al~~~~~~l~ 176 (471)
+..+.++.++++.+.+++.+.+. .+|.+. ....++|+.+++++ | .+++ +|++|+|+++++..++++++
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~----~--~~~~~~v~~~~g~t~al~~~~~~~~ 90 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVL---SNFHAELFRTMDEVKDGLRYIF----Q--TENRATMCVSGSAHAGMEAMLSNLL 90 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCC---CTTCHHHHHHHHHHHHHHHHHH----T--CCCSCEEEESSCHHHHHHHHHHHHC
T ss_pred eeecCCCCCCCHHHHHHhccccc---cCCChhHHHHHHHHHHHHHHHh----C--CCCCcEEEECCcHHHHHHHHHHHhc
Confidence 34455556667888887765432 235442 22567777777776 4 3556 89999999999999999999
Q ss_pred CCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
++||+|++++|+|.++. ..++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|
T Consensus 91 ~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i 165 (396)
T 2ch1_A 91 EEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGV 165 (396)
T ss_dssp CTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTH
T ss_pred CCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHH
Confidence 99999999999999985 47788999999999864 567999999999987 8999999999999999999 8899
Q ss_pred HHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH-----
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ----- 328 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~----- 328 (471)
.++|++| +++||+||+|... ..... +.. .+..+++.|++|.++ ++.++||+++++++++.+...+
T Consensus 166 ~~l~~~~-~~~li~Dea~~~g----~~~~~---~~~-~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~ 235 (396)
T 2ch1_A 166 GQICHQH-DCLLIVDAVASLC----GVPFY---MDK-WEIDAVYTGAQKVLG-APPGITPISISPKALDVIRNRRTKSKV 235 (396)
T ss_dssp HHHHHHT-TCEEEEECTTTBT----TBCCC---TTT-TTCCEEECCCC-CCC-CCSSCEEEEECHHHHHHHHTCSSCCSC
T ss_pred HHHHHHc-CCEEEEEcccccc----CCccc---hhh-cCcCEEEEcCCcccc-CCCCeEEEEECHHHHHhhhhccCcccc
Confidence 9999999 9999999999832 11111 211 233477889999875 4456799999998888764310
Q ss_pred ------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcc-
Q 012095 329 ------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGA- 389 (471)
Q Consensus 329 ------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g- 389 (471)
.....+++...|.++.++|+.. .++++++++++++++++++.+.|+++ |+++..+.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 312 (396)
T 2ch1_A 236 FYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI--AEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRH 312 (396)
T ss_dssp GGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGG
T ss_pred eEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccc
Confidence 1122456788888888888741 12457888999999999999999988 8888777663
Q ss_pred ---eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-ec--CHHHHHHHHHHHHHHHH
Q 012095 390 ---FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 390 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~~--~~e~i~~~~~~l~~~l~ 463 (471)
.+++++++.. .+..++.++|++++||.+.+|..+..++++|+++ +. +++++++++++|+++++
T Consensus 313 ~~~~~~~~~~~~~-----------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 313 RLPTVTGIMIPKG-----------VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLK 381 (396)
T ss_dssp BCTTEEEEECCTT-----------CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEEcCCC-----------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHH
Confidence 3678888642 2678899999876799999988766678999999 42 88999999999999998
Q ss_pred hhCC
Q 012095 464 TLRP 467 (471)
Q Consensus 464 ~~~~ 467 (471)
++++
T Consensus 382 ~~~~ 385 (396)
T 2ch1_A 382 ATHP 385 (396)
T ss_dssp HHCT
T ss_pred HhCc
Confidence 8754
No 100
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=1.3e-35 Score=305.04 Aligned_cols=366 Identities=13% Similarity=0.139 Sum_probs=256.4
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC--CC-------CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP--DF-------DTPVLIAEAGINAIREGFTRYTPNAGTLELRSA 140 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~--~~-------~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ 140 (471)
.++..+.++.+..+...+..+...|.++++|+.|++ ++ +.++.+.+++. .+...|++..+..+|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~~~~y~~~~~~~~l~~~ 83 (456)
T 2ez2_A 8 FRIKSVETVSMIPRDERLKKMQEAGYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MGDEAYAGSENFYHLERT 83 (456)
T ss_dssp SCCCCCCCCCCCCHHHHHHHHHHTTTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TCCCCSSSCHHHHHHHHH
T ss_pred eeeeeecccCCCCHHHHHHHHHHCCCCcccCCcccceeeeccccCCccCCHHHHHHhh----cchhhcccChhHHHHHHH
Confidence 466667776555555556666667777777777765 43 22345555443 445678888889999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHHHHcCCEEEEecCCCC----C---
Q 012095 141 ICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRIS----E--- 212 (471)
Q Consensus 141 ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~----~--- 212 (471)
++++++ .+++++|+|+++++..++++++++|| +++.|+| ..|...+...|++++.++++.+ +
T Consensus 84 la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~ 153 (456)
T 2ez2_A 84 VQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIA 153 (456)
T ss_dssp HHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCS
T ss_pred HHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEeccccccccccccc
Confidence 999872 35899999999999999999999999 7889999 7778899999999999998732 2
Q ss_pred -CCcCCHHHHHhhhccCC----cEEEEcCCCC-CcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc----------ccc
Q 012095 213 -NFLLDPKVLESKLTEKS----RLLILCSPSN-PTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH----------IIY 276 (471)
Q Consensus 213 -~~~ld~e~l~~~l~~~~----~~i~i~~p~N-PtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~----------~~~ 276 (471)
+|.+|+++|++++++++ ++|++++|+| |||.+++.+++++|+++|++| |++||+||+|.. +.+
T Consensus 154 ~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~-~i~li~De~~~~g~~~~~~~~~~~~ 232 (456)
T 2ez2_A 154 FKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAH-GIKVFYDATRCVENAYFIKEQEQGF 232 (456)
T ss_dssp CTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHT-TCCEEEECTTHHHHHHHHHHHSTTC
T ss_pred ccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHc-CCeEEEEcccccccccccccccccc
Confidence 36799999999997665 8889999998 999999999999999999999 999999999986 344
Q ss_pred CCCCccccc-cCCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcc-----cCCCChHHHHH-HHHHHh
Q 012095 277 APATHTSFA-SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQF-----TSGASSISQKA-GVAALG 348 (471)
Q Consensus 277 ~~~~~~~~~-~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~-----~~~~~~~~q~a-a~~~L~ 348 (471)
.+....++. .+.. ...++++ |++|.++ +| |.||+++ ++++++.+....... ..+.+.....+ +.+.++
T Consensus 233 ~g~~~~~~~~~~~~-~~d~~~~-S~kk~~~-~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~ 308 (456)
T 2ez2_A 233 ENKSIAEIVHEMFS-YADGCTM-SGKKDCL-VN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLRE 308 (456)
T ss_dssp TTSCHHHHHHHHHT-TCSEEEE-ETTTTTC-CS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHH
T ss_pred CCcchhhhhhhhcc-cCCEEEE-eCcccCC-CC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHH
Confidence 442111110 0111 1234444 7888765 77 8899998 788998887654321 11233333222 333332
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCC-HHHHHHHHHHcCCE
Q 012095 349 LGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIEN-SESLCRYLLDKAQV 426 (471)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~-~~~l~~~Ll~~~gV 426 (471)
. .. ++..++.+++.+++.+.|.+. |+.+..|.+++++|++++... +.... .- ...+++.|++++||
T Consensus 309 ~---~~---~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~~~gv 376 (456)
T 2ez2_A 309 A---MQ---YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFCEHLTQD-----EFPAQSLAASIYVETGV 376 (456)
T ss_dssp H---TC---HHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEEHHHHTTTSCGG-----GCHHHHHHHHHHHHHSE
T ss_pred H---hH---HHHHHHHHHHHHHHHHHHhcC-CCccccCCCceEEEEEhHHhcCCCChh-----hccHHHHHHHHHHhcCe
Confidence 1 11 233444455666777777775 888878888999999874210 00000 01 23347777556699
Q ss_pred EEEC-CCCC------------CCCCcEEEEee---cCHHHHHHHHHHHHHHHHhhC
Q 012095 427 ALVP-GDAF------------GDDTCIRISYA---ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 427 ~v~p-g~~f------------~~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+.+ |..| ...+++||+++ .+++++++++++|++++++..
T Consensus 377 ~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 377 RSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp ECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred eeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 8776 4322 12378999999 589999999999999987643
No 101
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=2.2e-35 Score=295.42 Aligned_cols=332 Identities=14% Similarity=0.110 Sum_probs=247.0
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 99 RLAAGEPDFDTPVLIAEAGINAIREGFT----RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 99 ~l~~g~~~~~~p~~v~~a~~~~~~~~~~----~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.|..+.+. ++|+.+++++.+.+.+... .|....+..+..+.+.+.+.+.+|. ++++|++|+|+++++..++.+
T Consensus 3 yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~v~~~~g~t~a~~~~~~~ 79 (382)
T 4eb5_A 3 YFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG--GGGTVVFTSGATEANNLAIIG 79 (382)
T ss_dssp BCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC--TTEEEEEESSHHHHHHHHHHH
T ss_pred eeccCCCC-CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEcCchHHHHHHHHHH
Confidence 34444443 5688999999998865211 1422212223444444444444563 568999999999999999999
Q ss_pred hc----CCCCeEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCH
Q 012095 175 VC----SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 175 l~----~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~ 247 (471)
+. ++||+|++++|+|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+||||.+++
T Consensus 80 l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 156 (382)
T 4eb5_A 80 YAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP- 156 (382)
T ss_dssp HHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC-
T ss_pred HHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC-
Confidence 98 8999999999999988776654 699999999864 4668999999999888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH-HHHHHH
Q 012095 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNK 326 (471)
Q Consensus 248 ~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~-i~~l~~ 326 (471)
+++|.++|++| +++ |+||+|.. +.....+.. .+.++++.||||.+|++| +||++++++. +..+..
T Consensus 157 --l~~i~~l~~~~-~~~-i~D~a~~~----g~~~~~~~~----~~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~~~~~ 222 (382)
T 4eb5_A 157 --VEEISEVLAGK-AAL-HIDATASV----GQIEVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEAKLQPVIL 222 (382)
T ss_dssp --HHHHHHHHTTS-SEE-EEECTTTB----TTBCCCHHH----HTCSEEEEETGGGTCCSS--CEEEEEETTCCCCCSSC
T ss_pred --HHHHHHHHHHC-CCE-EEEcchhc----CCcccCccc----cCCCEEEeehHHhcCCCc--eEEEEEccccccCceec
Confidence 88999999999 999 99999983 111111111 245689999999988666 7999987763 211100
Q ss_pred ----HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc---ceEEeEecCCc
Q 012095 327 ----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFSTY 399 (471)
Q Consensus 327 ----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~---g~~~~~~~~~~ 399 (471)
.......+++...+.++.++++. ..+++++++++++++++++.+.|++++|+++..+.+ +.++++.++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T 4eb5_A 223 GGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI 299 (382)
T ss_dssp SSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTS
T ss_pred CCCccccccCCCccHHHHHHHHHHHHH---HHHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc
Confidence 01122334566667777777764 245678899999999999999999988888876642 33467777632
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHHHHHHHH
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQAAVERI 458 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~i~~~~~~l 458 (471)
+..++.+.|.++ ||.+.+|..|.. ++++|++++. +++++++++++|
T Consensus 300 ------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 366 (382)
T 4eb5_A 300 ------------EGESIVLSLDMA-GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVL 366 (382)
T ss_dssp ------------CHHHHHHHHHHH-TCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHH
T ss_pred ------------CHHHHHHHHHHC-CEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHH
Confidence 678899988765 999999976432 4789999994 899999999999
Q ss_pred HHHHHhhC
Q 012095 459 KKGLLTLR 466 (471)
Q Consensus 459 ~~~l~~~~ 466 (471)
++++++++
T Consensus 367 ~~~~~~~~ 374 (382)
T 4eb5_A 367 PGVIERLR 374 (382)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987754
No 102
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.3e-35 Score=298.36 Aligned_cols=333 Identities=13% Similarity=0.073 Sum_probs=250.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~ 176 (471)
.+.|..+.+ .++|+.+.+++.+.+.. ...|....+..++|+.++++ +|. ++++|++|+|+++++..++++++
T Consensus 9 ~~yl~~~~~-~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~----~g~--~~~~v~~t~g~t~a~~~~~~~~~ 80 (392)
T 2z9v_A 9 PVITLTAGP-VNAYPEVLRGLGRTVLY-DYDPAFQLLYEKVVDKAQKA----MRL--SNKPVILHGEPVLGLEAAAASLI 80 (392)
T ss_dssp CSEECSSSC-CCCCHHHHHHTTSCCCC-TTSHHHHHHHHHHHHHHHHH----TTC--SSCCEEESSCTHHHHHHHHHHHC
T ss_pred cceeecCCC-cCCCHHHHHHHhccccc-cccHHHHHHHHHHHHHHHHH----hCC--CCCEEEEeCCchHHHHHHHHHhc
Confidence 355555543 35577888887765432 11111122345566666665 453 56899999999999999999999
Q ss_pred CCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++||+|++++|+|+++. ..++..|++++.++++.+ +.+|+++++++++ +++++|++++|+||||.+++ +++
T Consensus 81 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~ 155 (392)
T 2z9v_A 81 SPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDA 155 (392)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHH
T ss_pred CCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHH
Confidence 99999999999998753 445668999999998643 4689999999994 57899999999999999999 889
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHHHHHHH---
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQ--- 328 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~~--- 328 (471)
|.++|++| +++||+||+|... .....+.. .+..+++.|+||.+ |.+| +||+++++++++.+....
T Consensus 156 i~~l~~~~-~~~li~D~a~~~g----~~~~~~~~----~~~d~~~~s~sK~~~~~~g--~G~l~~~~~~~~~l~~~~~g~ 224 (392)
T 2z9v_A 156 IGALVSAH-GAYLIVDAVSSFG----GMKTHPED----CKADIYVTGPNKCLGAPPG--LTMMGVSERAWAKMKANPLAP 224 (392)
T ss_dssp HHHHHHHT-TCEEEEECTTTBT----TBSCCGGG----GTCSEEEECSSSTTCCCSC--CEEEEECHHHHHHHHTCTTSC
T ss_pred HHHHHHHc-CCeEEEEcccccC----Cccccccc----ccceEEEecCcccccCCCc--eeEEEECHHHHHHhhhccCCC
Confidence 99999999 9999999999742 11111211 24568999999965 4455 599999999988876421
Q ss_pred -----------------hcccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC---
Q 012095 329 -----------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--- 387 (471)
Q Consensus 329 -----------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~--- 387 (471)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..|.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 300 (392)
T 2z9v_A 225 RASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDL---YLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSI 300 (392)
T ss_dssp CSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGG
T ss_pred CceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccc
Confidence 112234566666666677764 2444 7788999999999999999988 88877633
Q ss_pred -cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-e--cCHHHHHHHHHHHHHHHH
Q 012095 388 -GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-A--ASLTTLQAAVERIKKGLL 463 (471)
Q Consensus 388 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~--~~~e~i~~~~~~l~~~l~ 463 (471)
.+.++|+.++.. .+..++.++|.+++||.+.+|..+..++++|+++ + .+++++++++++|+++++
T Consensus 301 ~~~~~~~~~~~~~-----------~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 301 ASPTTTAVRTPDG-----------VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp BCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH
T ss_pred cCCceEEEECCCC-----------CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHH
Confidence 456688888642 1678899998876699999998776678999995 5 499999999999999998
Q ss_pred hhCCC
Q 012095 464 TLRPG 468 (471)
Q Consensus 464 ~~~~~ 468 (471)
+++.+
T Consensus 370 ~~~~~ 374 (392)
T 2z9v_A 370 AAGRK 374 (392)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 87654
No 103
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.6e-35 Score=300.86 Aligned_cols=338 Identities=17% Similarity=0.164 Sum_probs=254.9
Q ss_pred hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCC-------CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 92 QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNA-------GTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~-------G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
..+++.|.|..+.+. ++|+.+.+++.+++.. ...|+ |.. +..+..+.+.+.+.+.+| .++++|++|+|
T Consensus 18 ~~~~~~iyld~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~g 93 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-PVDPRVAEKMMQFMTM-DGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG--ADPREIVFTSG 93 (423)
T ss_dssp --CCSSEECBTTTCC-CCCHHHHHHHTTSSST-TSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT--CCGGGEEEESS
T ss_pred cccCCCEeecCCCcC-CCCHHHHHHHHHHHhh-cccccCCCccccchhHHHHHHHHHHHHHHHHHcC--CCCCeEEEeCC
Confidence 356788999988876 5688898988877651 01221 111 123444555555555566 36789999999
Q ss_pred hHHHHHHHHHHhcC----CCCeEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC
Q 012095 164 AKQSILQAVLAVCS----PGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS 236 (471)
Q Consensus 164 ~~~al~~~~~~l~~----~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~ 236 (471)
+++++..+++++++ +||+|+++.|+|+++...+. ..|++++.++++. ++.+|+++|++++++++++|++++
T Consensus 94 gt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~ 171 (423)
T 3lvm_A 94 ATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTILVSIMH 171 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEEEEECCS
T ss_pred hHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCcEEEEEeC
Confidence 99999999998874 89999999999999887774 4599999999874 567899999999999999999999
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
|+||||.+++ +++|+++|++| |++||+||+|..... .. .... .+..+++.||||.+|.+| +||+++
T Consensus 172 ~~nptG~~~~---l~~i~~l~~~~-~~~li~Dea~~~~~~----~~---~~~~-~~~di~~~s~sK~~g~~g--~G~~~~ 237 (423)
T 3lvm_A 172 VNNEIGVVQD---IAAIGEMCRAR-GIIYHVDATQSVGKL----PI---DLSQ-LKVDLMSFSGHKIYGPKG--IGALYV 237 (423)
T ss_dssp BCTTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTTTTS----CC---CTTT-SCCSEEEEESTTTTSCSS--CEEEEE
T ss_pred CCCCCccccC---HHHHHHHHHHc-CCEEEEEhhhhcCCC----Cc---Chhh-cCCCEEEechHHhcCCCC--eEEEEE
Confidence 9999999999 88899999999 999999999875221 11 1111 345699999999888666 999999
Q ss_pred CHHHHHHHHHHHh-------cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc-
Q 012095 317 PKHFVAACNKIQS-------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG- 388 (471)
Q Consensus 317 ~~~~i~~l~~~~~-------~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~- 388 (471)
++++++.+..... ....+++...+.++.+++.. ...++++++++++++++++.+.|++++|+.+..+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 314 (423)
T 3lvm_A 238 RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI---AKEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEH 314 (423)
T ss_dssp CBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTT
T ss_pred eccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc
Confidence 8877665543321 22345677777777777764 345688999999999999999999998998876654
Q ss_pred --ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec-
Q 012095 389 --AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA- 446 (471)
Q Consensus 389 --g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~- 446 (471)
+.++++.++.. +..++.+.|.+ |.+.+|..|.. .+++||+++.
T Consensus 315 ~~~~~~~~~~~~~------------~~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~ 379 (423)
T 3lvm_A 315 GAPNILNVSFNYV------------EGESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRF 379 (423)
T ss_dssp BCTTEEEEEETTS------------CHHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCTT
T ss_pred cCCCeEEEEeCCC------------CHHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceEEEECCCC
Confidence 23355555432 67788887653 99999977543 3789999995
Q ss_pred -CHHHHHHHHHHHHHHHHhhCC
Q 012095 447 -SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l~~~~~ 467 (471)
+++++++++++|++++++++.
T Consensus 380 ~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 380 TTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHhhc
Confidence 889999999999999987643
No 104
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=1e-34 Score=290.70 Aligned_cols=334 Identities=16% Similarity=0.091 Sum_probs=245.3
Q ss_pred HHhcCC-CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 90 LAQAGV-SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 90 ~~~~g~-~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
+...|. ++|+++.|.++.++|+.+++++. .|+ +...+++.+++.+++.+|.+ +++++++++|+++++
T Consensus 22 i~~~g~~~v~~~~~~~~~~~~~~~v~~a~~--------~~~---~~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a~ 89 (374)
T 2aeu_A 22 LNEKGRDALYDLSGLSGGFLIDEKDKALLN--------TYI---GSSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSAI 89 (374)
T ss_dssp HHHTCGGGCEECSSCCCCCCCCHHHHHHHT--------STT---HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred HhccCccceeeecccCCCCCCCHHHHHHHH--------Hhc---CchHHHHHHHHHHHHHhCCC-CcceEEEEcChHHHH
Confidence 345677 89999999988889999988875 221 11456778888887778853 357999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcE-EEEcCCCCCcccC
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTEKSRL-LILCSPSNPTGSV 244 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~-i~i~~p~NPtG~~ 244 (471)
..+++++ |||+|++++|+|+++.. .++..|++++.+ .|+++++++ ++++++ |++++||||||.
T Consensus 90 ~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~- 156 (374)
T 2aeu_A 90 LATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI- 156 (374)
T ss_dssp HHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC-
T ss_pred HHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC-
Confidence 9999987 99999999998877543 678889999887 288999998 778999 889999999997
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC 324 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l 324 (471)
+..++++|.++|++| +++||+||+|..+..++....+... .+..++++||||.+ +|+|+||+++++++++.+
T Consensus 157 -~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~----~~~di~~~S~sK~l--~g~~~G~~~~~~~~~~~l 228 (374)
T 2aeu_A 157 -ELENFKKVINTAKNK-EAIVFVDDASGARVRLLFNQPPALK----LGADLVVTSTDKLM--EGPRGGLLAGKKELVDKI 228 (374)
T ss_dssp -CHHHHHHHHHHHHHH-TCCEEEECTTHHHHHHHTTCCCHHH----HTCSEEEEETTSSS--SSCSCEEEEEEHHHHHHH
T ss_pred -CcccHHHHHHHHHHc-CCEEEEECCcccccccccccCCccc----cCCcEEEecCcccc--cCcceEEEEECHHHHHHH
Confidence 778899999999999 9999999999876421110111111 13458999999985 578999999999999999
Q ss_pred HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH----HHHHHHHhcCC---CCCeee-CCCcceEEeEec
Q 012095 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER----RDFLVKSFGEL---EGVKMS-EPQGAFYLFIDF 396 (471)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~----r~~l~~~L~~~---~g~~~~-~p~~g~~~~~~~ 396 (471)
......+..+++++.+.++.++|... ..+.+++..+..+.. ++.+.+.|..+ +|+.+. .|.|.+|.|.++
T Consensus 229 ~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~ 306 (374)
T 2aeu_A 229 YIEGTKFGLEAQPPLLAGIYRALKNF--NLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYK 306 (374)
T ss_dssp HHHHHTTTCBCCHHHHHHHHHHHHHC--CHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEES
T ss_pred HHhhccccCCCCHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecc
Confidence 88776666678999999999998862 121223322222222 56666666664 366654 556666666554
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-CCCcEEEEeec-CH--HHHHHHHHHHHHHHHhhC
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCIRISYAA-SL--TTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-~~~~iRis~~~-~~--e~i~~~~~~l~~~l~~~~ 466 (471)
+.... ..+..+++..+++++||.+.||..|. .++++||+++. +. ++++++++.|+++++++-
T Consensus 307 ~~~~~--------~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~ 372 (374)
T 2aeu_A 307 DDTIN--------IKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAF 372 (374)
T ss_dssp SHHHH--------HHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHT
T ss_pred ccccc--------ccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 32100 00123477777777799999998774 35799999986 22 248888888888887754
No 105
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=1.5e-34 Score=289.40 Aligned_cols=325 Identities=12% Similarity=0.115 Sum_probs=249.7
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
+.++|+.+.+++.+.+. ..+ .....++.+.+.+.+.+.+|.+.+.++|++|+|+++++. ++..++++||+|+++
T Consensus 10 p~~~~~~v~~a~~~~~~---~~~--~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi~~ 83 (384)
T 3zrp_A 10 PTTIKEDVLVAGLENNV---GFT--SKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLKPNDKILVV 83 (384)
T ss_dssp CSCCCHHHHHHTTCCSC---CTT--SHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEEEE
T ss_pred CCCCCHHHHHHhhcccc---ccc--cHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEEEe
Confidence 44567788877765432 122 122245555555666656675433389999999999999 999999999999999
Q ss_pred CCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 186 APFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 186 ~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
+|+|.+ +...++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++| |
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~ 157 (384)
T 3zrp_A 84 SNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY-V 157 (384)
T ss_dssp CSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG-E
T ss_pred cCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc-C
Confidence 999965 5566788899999999875 456899999999987 8999999999999999999 88999999999 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH-------------HHHHh
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------------NKIQS 329 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l-------------~~~~~ 329 (471)
++||+|++|..... ... +. ..+..+++.|+||.++ ++.++||+++++++++.+ .....
T Consensus 158 ~~li~D~a~~~~~~----~~~---~~-~~~~d~~~~s~~K~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (384)
T 3zrp_A 158 ELIVVDGVSSVGAE----EVK---AE-EWNVDVYLTASQKALG-SAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLP 228 (384)
T ss_dssp EEEEEECTTTTTTS----CCC---TT-TTTCSEEEEETTSTTC-CCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHH
T ss_pred CEEEEECcccccCc----ccc---cc-ccCCCEEEecCccccc-CCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHH
Confidence 99999999875321 111 11 1346699999999885 334599999999998877 32221
Q ss_pred ---------cccC-CCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC----cceEEeE
Q 012095 330 ---------QFTS-GASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAFYLFI 394 (471)
Q Consensus 330 ---------~~~~-~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----~g~~~~~ 394 (471)
...+ +++...+.++.++++. ...+ +++++++++++++++.+.|+++ |+++..+. +++++|+
T Consensus 229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 304 (384)
T 3zrp_A 229 VMRGAEEGKAAYFATPPVHVILQLAEAFRL---IEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGV 304 (384)
T ss_dssp HHHHHHTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEE
T ss_pred HHHhhcccCCCcCCCCCHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEE
Confidence 1112 5666677766677764 2333 7889999999999999999998 88887766 5677888
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCCC
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRPGV 469 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~~ 469 (471)
.++.. +..++.+.|.++ ||.+.+|..+.. +++|+++.. +++++++++++|++++++++...
T Consensus 305 ~~~~~------------~~~~~~~~l~~~-gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~~ 367 (384)
T 3zrp_A 305 ILKVA------------DPQKVLAGTVNE-GVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLGEPI 367 (384)
T ss_dssp ECSSS------------CHHHHHHHHHTT-TCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred ECCCC------------CHHHHHHHHHHC-CEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 88752 688999998876 999999884433 899999884 89999999999999999876543
No 106
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.5e-35 Score=293.03 Aligned_cols=322 Identities=13% Similarity=0.095 Sum_probs=248.6
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCC--------
Q 012095 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP-------- 178 (471)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~-------- 178 (471)
.++++.+.+++.+++.....+|....+..++++.+++++.+.+|. ++++|++|+|+++++..++++++.+
T Consensus 40 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 40 SNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNN--KDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTC--TTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCC--CCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 345678889998887654444433336678888889999888884 6789999999999999999998776
Q ss_pred -----CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 179 -----GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 179 -----gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
||+|++++|+|.++...++..|++++.+|++. ++.+|+++|++++++ ++++|++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 99999999999999999999999999999864 467999999999988 8999999999999999998 889
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCc-cc------cccCCCCCCceEEEecCCcccCccchhheeeEcCHH-HHHHH
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATH-TS------FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-FVAAC 324 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~------~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~i~~l 324 (471)
|.++|++| |++||+||+|..+.++.... .. ...+. . +..+++.|++|.++ +|.|+||++++++ +++.+
T Consensus 193 i~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~K~~~-~~~~~g~~~~~~~~~~~~~ 268 (397)
T 3f9t_A 193 LSKIAKEN-NIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS-L-GVDSITIDPHKMGH-CPIPSGGILFKDIGYKRYL 268 (397)
T ss_dssp HHHHHHHH-TCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG-G-TCSEEECCTTTTTC-CCSSCEEEEESSGGGGGGT
T ss_pred HHHHHHHh-CCeEEEEccccchhhhhccccccccccccccccc-c-cCCeEEEccccccC-CCCCceEEEEeCHHHHHhh
Confidence 99999999 99999999998765422111 00 11111 1 45688999999875 7889999987554 44443
Q ss_pred HHHHhccc-----------CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEe
Q 012095 325 NKIQSQFT-----------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLF 393 (471)
Q Consensus 325 ~~~~~~~~-----------~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~ 393 (471)
........ .+.+.+++.++...+. ..++++..++++++++++.+.|+++ |+.+..+..+.++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~ 342 (397)
T 3f9t_A 269 DVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG-----REGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVA 342 (397)
T ss_dssp CEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEE
T ss_pred ccCCccccCCCccccccccccchHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEE
Confidence 22111111 1124455666655554 4667888888999999999999998 88755444455567
Q ss_pred EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 394 IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
++++ +..++.+.|.++ ||.+.+|.. ++++|++++. +++++++++++|+++++
T Consensus 343 ~~~~--------------~~~~~~~~l~~~-gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 343 IEDE--------------DYKEVCKKLRDR-GIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp EECT--------------THHHHHHHHHHT-TCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEeC--------------CHHHHHHHHHhC-CeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 7765 467888888876 999999864 5899999995 89999999999998764
No 107
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.1e-35 Score=295.06 Aligned_cols=328 Identities=13% Similarity=0.053 Sum_probs=249.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCC----CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYT----PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
+.+.|..+.+. ++|+.+.+++.+.+.... ..|. ...+..++++.+++++ | .++++|++|+|++++
T Consensus 26 ~~~~ld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~t~a 98 (406)
T 3cai_A 26 GWVHFDAPAGM-LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV----N--ADPGGVVLGADRAVL 98 (406)
T ss_dssp SCEECBGGGCC-CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCHHHH
T ss_pred CeEEEeCCCcC-CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh----C--CCCCeEEEeCChHHH
Confidence 37888888876 568889999998886532 1232 1234556666666665 5 356899999999999
Q ss_pred HHHHHHHh---cCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 168 ILQAVLAV---CSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 168 l~~~~~~l---~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
+..+++++ +++||+|+++.|+|+++...+.. .|++++.++++++ ++.+|+++|++++++++++|++++|+||
T Consensus 99 l~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~np 177 (406)
T 3cai_A 99 LSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNSASGT 177 (406)
T ss_dssp HHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEESBCTT
T ss_pred HHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeCCcCC
Confidence 99999887 78999999999999987655443 7999999998743 4568999999999989999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhe-eeEcCHH
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKH 319 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~ 319 (471)
||.+++ +++|.++|+++ +++||+|++|... .....+.. .+..+++.|+||.+| ++ +| |++++++
T Consensus 178 tG~~~~---l~~i~~l~~~~-~~~li~D~a~~~g----~~~~~~~~----~~~d~~~~s~~K~~g-~~--~G~~~~~~~~ 242 (406)
T 3cai_A 178 LGGVTD---LRAMTKLVHDV-GALVVVDHSAAAP----YRLLDIRE----TDADVVTVNAHAWGG-PP--IGAMVFRDPS 242 (406)
T ss_dssp TCBBCC---CHHHHHHHHHT-TCEEEEECTTTTT----TCCCCHHH----HCCSEEEEEGGGGTS-CS--CEEEEESCHH
T ss_pred ccccCC---HHHHHHHHHHc-CCEEEEEcccccC----CCCCCchh----cCCCEEEeehhhhcC-CC--cCeEEEEehH
Confidence 999999 88999999999 9999999999742 11111211 245689999999887 54 99 9999998
Q ss_pred HHHHHHHHHh---------cccCCCChHHHHHHHHHHhccCC-C-----------hHHHHHHHHHHHHHHHHHHHHhcCC
Q 012095 320 FVAACNKIQS---------QFTSGASSISQKAGVAALGLGYA-G-----------GEVVSKMVKAFRERRDFLVKSFGEL 378 (471)
Q Consensus 320 ~i~~l~~~~~---------~~~~~~~~~~q~aa~~~L~~~~~-~-----------~~~~~~~~~~~~~~r~~l~~~L~~~ 378 (471)
+++.+..... ....+++...+.++.++++.... . ..++++++++++++++++.+.|+++
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (406)
T 3cai_A 243 VMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSL 322 (406)
T ss_dssp HHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 8877654321 11234566666566566653100 0 0167889999999999999999998
Q ss_pred CCCeeeCCC---cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC------CCCC---CCcEEEEeec
Q 012095 379 EGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD------AFGD---DTCIRISYAA 446 (471)
Q Consensus 379 ~g~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~------~f~~---~~~iRis~~~ 446 (471)
+|+++..|. ++ ++++.++.. +..++.+.|.+ .||.+.+|. .|+. .+++|++++.
T Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~L~~-~gi~v~~g~~~~~~~~~g~~~~~~~iRis~~~ 388 (406)
T 3cai_A 323 PLVMLIGRPEAQIP-VVSFAVHKV------------PADRVVQRLAD-NGILAIANTGSRVLDVLGVNDVGGAVTVGLAH 388 (406)
T ss_dssp TTEEECCCCSSBCS-EEEEEETTB------------CHHHHHHHHHH-TTEECEECCSCHHHHHHTTTTTTCCEEEECCT
T ss_pred CCeEEcCCccccCC-EEEEEECCc------------CHHHHHHHHHH-CCcEEecCChHHHHHHcCCCCCCCeEEEEeec
Confidence 888887664 55 577777642 67789988876 599999987 3443 3799999997
Q ss_pred --CHHHHHHHHHHHHH
Q 012095 447 --SLTTLQAAVERIKK 460 (471)
Q Consensus 447 --~~e~i~~~~~~l~~ 460 (471)
+++++++++++|++
T Consensus 389 ~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 389 YSTMAEVDQLVRALAS 404 (406)
T ss_dssp TCCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHH
Confidence 88999999998875
No 108
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=5e-35 Score=290.76 Aligned_cols=330 Identities=14% Similarity=0.158 Sum_probs=254.2
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN---AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAV 172 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~---~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~ 172 (471)
++++|+.| | ..+|+.+.+++.+.+ .++.+. .+..++++.+++++ |.+.+++++++|+|+++++..++
T Consensus 4 ~~~~~~~g-p-~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~~~g~t~a~~~~~ 73 (366)
T 1m32_A 4 NYLLLTPG-P-LTTSRTVKEAMLFDS----CTWDDDYNIGVVEQIRQQLTALA----TASEGYTSVLLQGSGSYAVEAVL 73 (366)
T ss_dssp -CEECSSS-S-CCCCHHHHHTTCCCC----CTTSHHHHTTTHHHHHHHHHHHH----CSSSSEEEEEEESCHHHHHHHHH
T ss_pred ccccccCC-C-cCCCHHHHHHHhhhh----cCCCHHHHHHHHHHHHHHHHHHh----CCCCcCcEEEEecChHHHHHHHH
Confidence 36899999 4 457888888887642 122222 67888999999887 32223468999999999999999
Q ss_pred HHhcCCCCeEEEcC-CCCCC-hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCcEEEEcCCCCCcccCCCHH
Q 012095 173 LAVCSPGDEVIIPA-PFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 173 ~~l~~~gd~Vlv~~-p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~~i~i~~p~NPtG~~~~~~ 248 (471)
++++++||+|++.+ ++|+. +...++..|++++.++++. ++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 74 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~-- 149 (366)
T 1m32_A 74 GSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNP-- 149 (366)
T ss_dssp HHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC--
T ss_pred HHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecC--
Confidence 99999999988775 66654 5677888999999999863 456899999999975 5789999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
+++|.++|++| +++||+||+|..... .. .+.. .+..+++.|+||.++ .+.++||+++++++++.+....
T Consensus 150 -l~~i~~l~~~~-~~~li~Dea~~~~~~----~~---~~~~-~~~di~~~s~~K~~~-~~~g~G~~~~~~~~~~~~~~~~ 218 (366)
T 1m32_A 150 -IDEVGALAHRY-GKTYIVDAMSSFGGI----PM---DIAA-LHIDYLISSANKCIQ-GVPGFAFVIAREQKLAACKGHS 218 (366)
T ss_dssp -HHHHHHHHHHH-TCEEEEECTTTTTTS----CC---CTTT-TTCSEEEEESSSTTC-CCSSEEEEEEEHHHHTTCTTCC
T ss_pred -HHHHHHHHHHc-CCEEEEECCccccCc----Cc---cccc-cCccEEEecCccccc-CCCceEEEEECHHHHHhhcCCC
Confidence 88999999999 999999999985321 11 1211 346699999999873 2345799999998887654310
Q ss_pred ------------------hcccCCCChHHHHHHHHHHhccCCChHH--HHHHHHHHHHHHHHHHHHhcCCCCCeeeCC--
Q 012095 329 ------------------SQFTSGASSISQKAGVAALGLGYAGGEV--VSKMVKAFRERRDFLVKSFGELEGVKMSEP-- 386 (471)
Q Consensus 329 ------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~--~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-- 386 (471)
....++++...+.++.++|+. ..++ +++++++++++++++.+.|+++ |+++..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~ 294 (366)
T 1m32_A 219 RSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKE---LAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDE 294 (366)
T ss_dssp SCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGG
T ss_pred CCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHH---HHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCch
Confidence 011246788888888888875 2344 6788999999999999999988 8877655
Q ss_pred -CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 387 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
.+++++|++++...+ .+..++.+.|.++ ||.+.+|..| .++++|++++. +++++++++++|+++++
T Consensus 295 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 295 LHSPIITAFYSPEDPQ---------YRFSEFYRRLKEQ-GFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp GBCSSEEEEECCCCTT---------CCHHHHHHHHHHT-TEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred hcCceEEEEEcCccCC---------CCHHHHHHHHHHC-CEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 467788999874100 2678899998876 9999999877 46899999996 78999999999999876
Q ss_pred hh
Q 012095 464 TL 465 (471)
Q Consensus 464 ~~ 465 (471)
++
T Consensus 364 ~~ 365 (366)
T 1m32_A 364 WT 365 (366)
T ss_dssp TC
T ss_pred hc
Confidence 54
No 109
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=3e-35 Score=291.19 Aligned_cols=321 Identities=13% Similarity=0.070 Sum_probs=243.6
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
+.++|+.+++++.+++.. ...|....+..++|+.+++++ |. +++++++|+|+++++..++++++++||+|+++
T Consensus 9 p~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~----g~--~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 9 PVRLHPKALEALARPQLH-HRTEAAREVFLKARGLLREAF----RT--EGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp SCCCCHHHHHHHHSCCCC-TTSHHHHHHHHHHHHHHHHHH----TC--SSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHhccCCCC-ccCHHHHHHHHHHHHHHHHHh----CC--CCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 345678888888765432 111111233466677766665 53 46899999999999999999999999999999
Q ss_pred CCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC-C
Q 012095 186 APFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP-R 262 (471)
Q Consensus 186 ~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~-~ 262 (471)
+|+|+++. ..++..|++++.++++. ++.+|++++++ +++++|++++|+||||.+++ +++|.++|++|+ |
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 99999875 44566899999999864 35689988887 67899999999999999999 889999999863 7
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHH---------HHH----H-
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAA---------CNK----I- 327 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~---------l~~----~- 327 (471)
++||+||+|... .....+.. .+..+++.|+||.+ |.+| +||+++++++++. +.. .
T Consensus 154 ~~li~D~a~~~~----~~~~~~~~----~~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (352)
T 1iug_A 154 GLVGADMVTSLL----VGEVALEA----MGVDAAASGSQKGLMCPPG--LGFVALSPRALERLKPRGYYLDLARELKAQK 223 (352)
T ss_dssp CEEEEECTTTBT----TBCCCSGG----GTCSEEEEESSSTTCCCSC--EEEEEECHHHHHTCCCCSSTTCHHHHHHHHT
T ss_pred CEEEEECCcccc----Ccceeccc----cCeeEEEecCcccccCCCc--eeEEEECHHHHHHhhCCCceeeHHHHHhhcc
Confidence 999999999742 11111111 24568899999954 4334 7999999988765 221 1
Q ss_pred HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-cceEEeEecCCccCCcccC
Q 012095 328 QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 328 ~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~g~~~~~~~~~~~~~~~~~ 406 (471)
......+++...+.++.++++. .++++++.+++++++++++.+.|+++ |+++..|. .++++|++++..
T Consensus 224 ~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~------- 292 (352)
T 1iug_A 224 EGESAWTPAINLVLAVAAVLEE---VLPRLEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEG------- 292 (352)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHH---HGGGHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTT-------
T ss_pred cCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCC-------
Confidence 1223445677788777778775 23447889999999999999999988 88887774 566788888742
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhCC
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+..++.++|.++ ||.+.+|..+..++++|++++. +++++++++++|+++++++.+
T Consensus 293 ----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 350 (352)
T 1iug_A 293 ----VPYARVKEAFAQR-GAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEILP 350 (352)
T ss_dssp ----CCHHHHHHHHHTT-TEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ----CCHHHHHHHHHHC-CEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhcC
Confidence 2678899988866 9999999855456899999996 789999999999999988743
No 110
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.3e-34 Score=289.36 Aligned_cols=330 Identities=14% Similarity=0.111 Sum_probs=245.8
Q ss_pred EcCCCCCCCCChHHHHHHHHHHHHcCCC----CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 99 RLAAGEPDFDTPVLIAEAGINAIREGFT----RYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 99 ~l~~g~~~~~~p~~v~~a~~~~~~~~~~----~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.|..+.+. ++|+.+.+++.+.+.+... .|....+..++.+.+.+.+++.+|. ++++|++|+|+++++..++++
T Consensus 3 yld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~i~~~~g~~~a~~~~~~~ 79 (382)
T 4hvk_A 3 YFDYTSAK-PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG--GGGTVVFTSGATEANNLAIIG 79 (382)
T ss_dssp BCBTTTCC-CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC--TTEEEEEESSHHHHHHHHHHH
T ss_pred eecCCCcC-CCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC--CcCeEEEECCchHHHHHHHHH
Confidence 34444433 4577899999988865211 1211123345666666666666774 678999999999999999999
Q ss_pred hc----CCCCeEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCH
Q 012095 175 VC----SPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 175 l~----~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~ 247 (471)
++ ++||+|++++++|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+||||.+++
T Consensus 80 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 156 (382)
T 4hvk_A 80 YAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP- 156 (382)
T ss_dssp HHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC-
T ss_pred hhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEECCCCCceeeCC-
Confidence 88 9999999999999998876554 599999999873 4579999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHH
Q 012095 248 NLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKI 327 (471)
Q Consensus 248 ~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~ 327 (471)
+++|.++|++| ++ ||+|++|..... ...+.. .+..+++.|+||.+|.+| +|+++++++. .+...
T Consensus 157 --~~~i~~l~~~~-~~-li~D~a~~~~~~----~~~~~~----~~~d~~~~s~~K~~g~~g--~g~~~~~~~~--~~~~~ 220 (382)
T 4hvk_A 157 --VEEISEVLAGK-AA-LHIDATASVGQI----EVDVEK----IGADMLTISSNDIYGPKG--VGALWIRKEA--KLQPV 220 (382)
T ss_dssp --HHHHHHHHSSS-SE-EEEECTTTBTTB----CCCHHH----HTCSEEEEESGGGTSCTT--CEEEEEETTC--CCCCS
T ss_pred --HHHHHHHHHHc-CE-EEEEhHHhcCCC----CCCchh----cCCCEEEEeHHHhcCCCc--eEEEEEcCcc--CcCcc
Confidence 88999999999 99 999999874211 111111 234589999999887666 7887776543 11111
Q ss_pred -------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc---ceEEeEecC
Q 012095 328 -------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG---AFYLFIDFS 397 (471)
Q Consensus 328 -------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~---g~~~~~~~~ 397 (471)
......+++...+.++.+++.. ..+++++.+++++++++++.+.|++++|+.+..+.+ +.++++.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (382)
T 4hvk_A 221 ILGGGQENGLRSGSENVPSIVGFGKAAEI---TAMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFS 297 (382)
T ss_dssp SCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEET
T ss_pred cccCCCcCccccCCcCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEEC
Confidence 1111334567777777777764 356789999999999999999999998988876654 234666665
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEeec--CHHHHHHHHH
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~~~--~~e~i~~~~~ 456 (471)
.. +..++.+.|.++ ||.+.+|..|.. ++++|++++. ++++++++++
T Consensus 298 ~~------------~~~~~~~~l~~~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~ 364 (382)
T 4hvk_A 298 YI------------EGESIVLSLDMA-GIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLE 364 (382)
T ss_dssp TC------------CHHHHHHHHHHT-TCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHH
T ss_pred CC------------CHHHHHHHHHHC-CEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHH
Confidence 42 678888887765 999999987653 4789999995 8899999999
Q ss_pred HHHHHHHhhC
Q 012095 457 RIKKGLLTLR 466 (471)
Q Consensus 457 ~l~~~l~~~~ 466 (471)
+|++++++++
T Consensus 365 ~l~~~~~~~~ 374 (382)
T 4hvk_A 365 VLPGVIERLR 374 (382)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 111
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=4e-35 Score=290.08 Aligned_cols=325 Identities=19% Similarity=0.238 Sum_probs=238.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+.+.+.+ +++.+.+++.++.. +...|++..+..+|++++++++ | .+++++++|+++++..+++++
T Consensus 4 ~~i~~~~~~~~~-p~~~~~~a~~~~~~-~~~~y~~~~~~~~l~~~la~~~----g----~~~~~~~~~gt~a~~~~~~~~ 73 (347)
T 1jg8_A 4 MMIDLRSDTVTK-PTEEMRKAMAQAEV-GDDVYGEDPTINELERLAAETF----G----KEAALFVPSGTMGNQVSIMAH 73 (347)
T ss_dssp -CEECSCGGGCC-CCHHHHHHHHTCCC-CCGGGTCCHHHHHHHHHHHHHH----T----CSEEEEESCHHHHHHHHHHHH
T ss_pred eEEEeccccCCC-CCHHHHHHHhcCCC-CCcccCCChHHHHHHHHHHHHh----C----CceEEEecCcHHHHHHHHHHh
Confidence 579999999887 55678887765432 2346878888899999999986 3 246788888889999999999
Q ss_pred cCCCCeEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCc-ccCC
Q 012095 176 CSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPT-GSVY 245 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPt-G~~~ 245 (471)
++|||+|++++|+|.... ..++..|++++.+ .+ .++.+|++++++++++ ++++|++++||||| |.++
T Consensus 74 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~ 150 (347)
T 1jg8_A 74 TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV 150 (347)
T ss_dssp CCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC
T ss_pred cCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEeccccccCCccC
Confidence 999999999999986533 3677889999988 43 3456899999999975 68899999999999 9999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCcc--ccCCCCccccccCCCCCCceEEEecCCcccCccchhhe-eeEcCHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHI--IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHFVA 322 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~~i~ 322 (471)
+.+++++|+++|++| |++||+||+|... .+.+.. ...+....+ .++.||||.++++ +| |+++++++++
T Consensus 151 ~~~~l~~i~~~a~~~-~~~li~D~a~~~~~~~~~~~~---~~~~~~~~d--~~~~s~sK~l~~~---~G~~~~~~~~~~~ 221 (347)
T 1jg8_A 151 PLENIKEICTIAKEH-GINVHIDGARIFNASIASGVP---VKEYAGYAD--SVMFCLSKGLCAP---VGSVVVGDRDFIE 221 (347)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEEETTHHHHHHHHCCC---HHHHHHTCS--EEEEESSSTTCCS---SCEEEEECHHHHH
T ss_pred cHHHHHHHHHHHHHC-CCEEEeehhhhhcchhhcCCC---hHHhccccc--EEEEecccccCCC---ceEEEEcCHHHHH
Confidence 999999999999999 9999999997532 122221 111111123 3345899999743 67 5678999998
Q ss_pred HHHHHHhcccCC--CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEecCCc
Q 012095 323 ACNKIQSQFTSG--ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTY 399 (471)
Q Consensus 323 ~l~~~~~~~~~~--~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~~~~ 399 (471)
.+...+..+..+ .+.+.+.++..+|+.. .+.+. + ..++++.+.+.|+++ |+.+. .+..+.|+|++++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~---~-~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 1jg8_A 222 RARKARKMLGGGMRQAGVLAAAGIIALTKM---VDRLK---E-DHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNL 293 (347)
T ss_dssp HHHHHHHHHTCCCSSTHHHHHHHHHHHHHS---STTHH---H-HHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTS
T ss_pred HHHHHHHHcCCchhHHHHHHHHHHHHHHHH---HHHHH---H-HHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcccc
Confidence 887765544433 3445666666666541 12222 2 234667788888877 77652 234455689988731
Q ss_pred cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 400 YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+ .+..+++++|.++ ||.+.++. ++++|++++. +++++++++++|+++++++
T Consensus 294 -~---------~~~~~~~~~l~~~-gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 294 -K---------VNAHGFIEALRNS-GVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp -S---------SCHHHHHHHHHHH-TEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -c---------CCHHHHHHHHHHC-CCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 0 2678899998765 99999853 4689999865 8999999999999998764
No 112
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=7.8e-35 Score=288.79 Aligned_cols=333 Identities=13% Similarity=0.059 Sum_probs=250.2
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
+.+|+|+.+.+. ++|+.+.+++.+++. +|.+..|..++++.+++++.+.+| .++++|++|+|+++++..++++
T Consensus 13 p~~i~l~~~~~~-~~~~~v~~a~~~~~~----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~~~~~~~ 85 (359)
T 1svv_A 13 PKPYSFVNDYSV-GMHPKILDLMARDNM----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTNLIACSL 85 (359)
T ss_dssp --CEECSCSCSS-CCCHHHHHHHHHHTT----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHHHHHHHH
T ss_pred CeeEEecCCCcC-CCCHHHHHHHHHHHh----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHHHHHHHH
Confidence 458999998776 678889999988764 476777889999999999999988 4678999999999999999999
Q ss_pred hcCCCCeEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC-------CcEEEEcCCCCCcccCC
Q 012095 175 VCSPGDEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEK-------SRLLILCSPSNPTGSVY 245 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~-------~~~i~i~~p~NPtG~~~ 245 (471)
++++||.|++++|+|+++.. .++..|++++.++.+ ++.+|+++|+++++++ +++|++++| ||||.++
T Consensus 86 ~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~ 161 (359)
T 1svv_A 86 ALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY 161 (359)
T ss_dssp HCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC
T ss_pred HhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec
Confidence 99999999999999998887 488899999999974 5779999999999765 889999999 7999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+.+++++|+++|++| |++||+||+|..+.++..+ .....+.-.....+++.|++|..+ ...+|++++++++++.+.
T Consensus 162 ~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~d~~~~s~~K~g~--~~~~g~l~~~~~~~~~~~ 237 (359)
T 1svv_A 162 TKQELEDISASCKEH-GLYLFLDGARLASALSSPV-NDLTLADIARLTDMFYIGATKAGG--MFGEALIILNDALKPNAR 237 (359)
T ss_dssp CHHHHHHHHHHHHHH-TCEEEEECTTHHHHHTSTT-CCCCHHHHHHHCSEEEEECTTTTC--SSCEEEEECSGGGCTTHH
T ss_pred CHHHHHHHHHHHHHh-CCEEEEEccchhhhhcCCC-cchhhhhhhhcCCEEEEecccCCC--CCceEEEEEcccHHHHHH
Confidence 999999999999999 9999999999554322111 000000000112367778888743 245788888999888776
Q ss_pred HHH--hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCc
Q 012095 326 KIQ--SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSE 403 (471)
Q Consensus 326 ~~~--~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~ 403 (471)
... .......+.....++.+++. +..+++++++++++++++.+.| +.+|+++..|.+++|+|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------ 305 (359)
T 1svv_A 238 HLIKQRGALMAKGWLLGIQFEVLMK-----DNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------ 305 (359)
T ss_dssp HHHHHTTCCCTTTHHHHHHHHHHTS-----TTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------
T ss_pred HHHhcCCcccccchhhHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------
Confidence 542 11111212222222333343 2346778899999999999999 566898887888999998763
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 404 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 404 ~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
.++.++|++++||.+.+. ....++++|++++. +++++++++++|+++++++
T Consensus 306 ----------~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 306 ----------NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ----------HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred ----------HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 368888887668988321 11235689998764 8999999999999887653
No 113
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=9.2e-35 Score=292.57 Aligned_cols=326 Identities=17% Similarity=0.174 Sum_probs=245.7
Q ss_pred cCCCeEEcCCCCCCCC---ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPDFD---TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~~~---~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|++++|++.|.+... .++.+.+++.+++.+.... ...+..+.++.+++++.+.+| ++++++|+|+++++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~g----~~~v~~~~~gt~a~~ 107 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLT--SRAFHSDQLGPWYEKVAKLTN----KEMVLPMNTGAEAVE 107 (392)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCC--CTTSEETTHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHhcC----CCEEEEeCcHHHHHH
Confidence 4678999998875544 4789999999988653222 112233344444444444445 579999999999999
Q ss_pred HHHHHhcCC----------CCeEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVCSP----------GDEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~~~----------gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++.+..+ +|.|+++.|+|+++...+...+.. +..++. .|+++|+++++
T Consensus 108 ~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 180 (392)
T 3ruy_A 108 TAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAIT 180 (392)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhc
Confidence 999887644 689999999998877666554332 444443 28999999999
Q ss_pred cCCcEEEEcCCCCCcccCCCHHH-HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 227 EKSRLLILCSPSNPTGSVYPKNL-LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~~~~~~-l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
+++++|++++|+||||.+++.++ +++|+++|++| +++||+||+|.++.+.+... .. ...+...+ +.||||.++
T Consensus 181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g~~~-~~-~~~~~~~d---~~~~SK~l~ 254 (392)
T 3ruy_A 181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKE-NVLFVADEIQTGLGRTGKVF-AC-DWDNVTPD---MYILGKALG 254 (392)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTTTTTSSSS-GG-GGGTCCCS---EEEECGGGG
T ss_pred cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCccccch-hh-hccCCCCC---EEEEchhhh
Confidence 89999999999999999996555 99999999999 99999999998776554321 11 11111122 337899876
Q ss_pred ccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC--CCCe
Q 012095 306 MTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL--EGVK 382 (471)
Q Consensus 306 ~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~--~g~~ 382 (471)
+| +|+||+++++++++.+.......+++.+++++.++.++|+. .+. ++.+++++++++++.+.|+++ +.+.
T Consensus 255 -gG~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (392)
T 3ruy_A 255 -GGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEV----LEE-EKLTERSLQLGEKLVGQLKEIDNPMIT 328 (392)
T ss_dssp -TTTSCCEEEEECHHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHH----HHH-TTHHHHHHHHHHHHHHHHTTCCCTTEE
T ss_pred -CChhhhEEEEECHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHH----HHh-hhHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 56 99999999999998887666666778999999999999985 222 677888999999999999987 3355
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~ 460 (471)
...+.++|+. +.++. +..++.+.|.+ .||.+.||. ++++|+++. .+++++++++++|++
T Consensus 329 ~~~~~g~~~~-~~~~~-------------~~~~l~~~l~~-~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~ 389 (392)
T 3ruy_A 329 EVRGKGLFIG-IELNE-------------PARPYCEQLKA-AGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKIKA 389 (392)
T ss_dssp EEEEETTEEE-EEESS-------------CSHHHHHHHHT-TTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEeeeeEEE-EEEcc-------------hHHHHHHHHHH-CCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 5666666654 45653 45688888875 599999875 679999955 489999999999998
Q ss_pred HH
Q 012095 461 GL 462 (471)
Q Consensus 461 ~l 462 (471)
++
T Consensus 390 ~l 391 (392)
T 3ruy_A 390 VL 391 (392)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 114
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=4.5e-35 Score=289.63 Aligned_cols=318 Identities=16% Similarity=0.157 Sum_probs=243.4
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEE
Q 012095 106 DFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVI 183 (471)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vl 183 (471)
+.++|+.+.+++.+.+.. ++++. .+..++++.++++ +|.+.++++|++|+|+++++..+++++++ |+|+
T Consensus 8 p~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~----~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl 78 (353)
T 2yrr_A 8 PTPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAAL----FDPGEGALVAALAGSGSLGMEAGLANLDR--GPVL 78 (353)
T ss_dssp SCCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHH----HCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEE
T ss_pred CCCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHH----hCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEE
Confidence 345678888888765532 22221 2345555555555 56544578999999999999999998876 8999
Q ss_pred EcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 184 IPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 184 v~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
+++|.|+++ ...++..|++++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 153 (353)
T 2yrr_A 79 VLVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEA 153 (353)
T ss_dssp EEECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHH
T ss_pred EEcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHc
Confidence 999998875 455678899999999864 456899999999988 8999999999999999999 88999999999
Q ss_pred CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHHHH-------------H
Q 012095 261 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACN-------------K 326 (471)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~-------------~ 326 (471)
+++||+||+|.... ....+..+ +..+++.|++|.+ |.+| +||+++++++++.+. .
T Consensus 154 -~~~li~D~a~~~~~----~~~~~~~~----~~d~~~~s~~K~~~~~~g--~G~~~~~~~~~~~l~~~~~~~~~~~~~~~ 222 (353)
T 2yrr_A 154 -GALFFLDAVTTLGM----LPFSMRAM----GVDYAFTGSQKCLSAPPG--LAPIAASLEARKAFTGKRGWYLDLARVAE 222 (353)
T ss_dssp -TCEEEEECTTTTTT----SCCCHHHH----TCSEEECCTTSTTCCCSS--CEEEEECHHHHHHCCCCSCSTTCHHHHHH
T ss_pred -CCeEEEEcCccccc----cccccccc----CceEEEecCcccccCCCc--eEEEEECHHHHHHhccCCCccccHHHHhh
Confidence 99999999996421 11122221 3358889999965 4455 799999999887664 1
Q ss_pred H--HhcccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC--cceEEeEecCCccC
Q 012095 327 I--QSQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSEPQ--GAFYLFIDFSTYYG 401 (471)
Q Consensus 327 ~--~~~~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~--~g~~~~~~~~~~~~ 401 (471)
. ......+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..+. +++++|++++..
T Consensus 223 ~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-- 296 (353)
T 2yrr_A 223 HWERGGYHHTTPVLLHYALLEALDL---VLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEG-- 296 (353)
T ss_dssp HHTTCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTT--
T ss_pred hhhcCCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCC--
Confidence 1 1222345677777777777764 2333 7888999999999999999988 88887654 677778888642
Q ss_pred CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHH-HHHHHHHHHHHh
Q 012095 402 SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQ-AAVERIKKGLLT 464 (471)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~-~~~~~l~~~l~~ 464 (471)
.+..++.+.|.++ ||.+.+|..|..++++|+++.. ++++++ +++++|++++++
T Consensus 297 ---------~~~~~~~~~l~~~-gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 297 ---------VDADRLVRALYAE-GVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp ---------CCHHHHHHHHHHT-TEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred ---------CCHHHHHHHHHHC-CEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 2678899998876 9999999988778899999943 778888 999999998764
No 115
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=2.3e-34 Score=285.22 Aligned_cols=328 Identities=11% Similarity=0.075 Sum_probs=240.9
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
.+.+|+|+.+.+ ..+++.+.+++.++.......|+ ..++++.+++++.+.+| .+++|++|+|+++++..+++
T Consensus 6 ~~~~id~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~----~~~~~~~l~~~la~~~g---~~~~v~~~~~gt~a~~~al~ 77 (356)
T 1v72_A 6 RPPALGFSSDNI-AGASPEVAQALVKHSSGQAGPYG----TDELTAQVKRKFCEIFE---RDVEVFLVPTGTAANALCLS 77 (356)
T ss_dssp CCCCCBCSCGGG-CCCCHHHHHHHHHTTSSCCCSTT----CSHHHHHHHHHHHHHHT---SCCEEEEESCHHHHHHHHHH
T ss_pred CCceEeeccCCc-cCCCHHHHHHHHhhccCcccccc----cchHHHHHHHHHHHHhC---CCCcEEEeCCccHHHHHHHH
Confidence 356899998865 45678899998876522123443 34566666666666667 24579999999999999999
Q ss_pred HhcCCCCeEEEcCCCCCChHHH--HHHc--CCEEEEecCCCCCCCcCCHHHHHh-hhcc-------CCcEEEEcCCCCCc
Q 012095 174 AVCSPGDEVIIPAPFWVSYPEM--ARIA--DATPVILPTRISENFLLDPKVLES-KLTE-------KSRLLILCSPSNPT 241 (471)
Q Consensus 174 ~l~~~gd~Vlv~~p~y~~~~~~--~~~~--G~~~~~v~~~~~~~~~ld~e~l~~-~l~~-------~~~~i~i~~p~NPt 241 (471)
++++|||.|+++.|+|.++... +... |++++.+|.+ ++.+|+++|++ ++++ ++++|++++|+| |
T Consensus 78 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-t 153 (356)
T 1v72_A 78 AMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-V 153 (356)
T ss_dssp TSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-T
T ss_pred HhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-C
Confidence 9999999999999998766554 6666 9999999874 36799999999 8875 688999999987 9
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcccc--CCCCccccccCCCCCCceEEEecCCcccCccchhhe--eeEcC
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLG--YIAGP 317 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G--~v~~~ 317 (471)
|.+++.+++++|+++|++| +++||+|++|..+.. .+.. .....+.. +..+++.|+||. + +|+| |++++
T Consensus 154 G~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~-~~~~~~~~--~~d~~~~s~sK~-g---~~~G~g~~~~~ 225 (356)
T 1v72_A 154 GSIYTLDEIEAIGDVCKSS-SLGLHMDGSRFANALVSLGCS-PAEMTWKA--GVDALSFGATKN-G---VLAAEAIVLFN 225 (356)
T ss_dssp SCCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHHTCC-TTTTTGGG--TCCEEEECCGGG-T---CSSCEEEEESS
T ss_pred CccCCHHHHHHHHHHHHHc-CCeEEEEchhhHhHhccCCCC-HHHhhhhh--cCCEEEEecccC-C---CcCccEEEEEC
Confidence 9999999999999999999 999999999975421 2211 11111111 112445689998 4 3666 88889
Q ss_pred HHHHHHHHHHHhcccC-CC-ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEe
Q 012095 318 KHFVAACNKIQSQFTS-GA-SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFID 395 (471)
Q Consensus 318 ~~~i~~l~~~~~~~~~-~~-~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~ 395 (471)
+++++.+.......+. .. ....+..+...+. +....+..++++++++++.+.|++++|+++..|.+++++|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 300 (356)
T 1v72_A 226 TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLT-----DDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCR 300 (356)
T ss_dssp GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTS-----TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEE
T ss_pred HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEE
Confidence 9999888765433221 11 2222222233332 233445677788899999999998889988778888889988
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
++ .+++++|.++ ||.+.||. |+ ++++|+++.. +++++++++++|++++++.
T Consensus 301 ~~----------------~~~~~~l~~~-gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 301 LD----------------SAMIDALLKA-GFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp EC----------------HHHHHHHHHT-TCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred cC----------------HHHHHHHHhc-CeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 74 2688888765 99999987 66 7899999874 8899999999999987654
No 116
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-34 Score=291.96 Aligned_cols=336 Identities=14% Similarity=0.097 Sum_probs=252.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHc-CCCCCCCCC---CCHH--HHHHHH-HHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIRE-GFTRYTPNA---GTLE--LRSAIC-HKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~-~~~~Y~~~~---G~~~--lr~~ia-~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.++|+|..|.+++ |+.+.+++.+++.+ ...+|+... |.+. +++.++ +++.+.+|. ++++|++++|+ ++
T Consensus 23 ~~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~--~~~~i~~~sGt-~a 97 (407)
T 2dkj_A 23 REGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA--AWANVQPHSGS-QA 97 (407)
T ss_dssp HTSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSHH-HH
T ss_pred hcceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC--CcceEEecchH-HH
Confidence 4689999999887 78899999888764 345564332 5554 444433 566667774 45567777775 59
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCCh---HHHHHHcCC--EEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSY---PEMARIADA--TPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~---~~~~~~~G~--~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPt 241 (471)
+..++++++++||+|++++|+|.++ ...++..|. .++.+++++ +++.+|++++++++++ ++++|++++|+||
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~- 175 (407)
T 2dkj_A 98 NMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTELIDLEEVRRLALEHRPKVIVAGASAYP- 175 (407)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEECCSSCC-
T ss_pred HHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCccCHHHHHHHHhhcCCeEEEEeccccC-
Confidence 9999999999999999999999988 345556666 455554432 3577999999999975 8999999999998
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KH 319 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~ 319 (471)
...+ +++|.++|++| +++||+||+|.. +.+.+... .. + ...++++.||||.+ +|+|+||++++ ++
T Consensus 176 -~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~-~~--~---~~~di~~~s~sK~l--~g~~~G~~~~~~~~ 242 (407)
T 2dkj_A 176 -RFWD---FKAFREIADEV-GAYLVVDMAHFAGLVAAGLHP-NP--L---PYAHVVTSTTHKTL--RGPRGGLILSNDPE 242 (407)
T ss_dssp -SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTCSC-CC--T---TTCSEEEEESSGGG--CCCSCEEEEESCHH
T ss_pred -CCCC---HHHHHHHHHHc-CCEEEEEccccccccccCccC-Cc--c---ccccEEEEeccccC--CCCCceEEEECCHH
Confidence 5666 89999999999 999999999997 54443211 11 1 12568999999954 68899999999 89
Q ss_pred HHHHHHHHHhcccCCCChHH-HHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecC
Q 012095 320 FVAACNKIQSQFTSGASSIS-QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFS 397 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~~~~~~-q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~ 397 (471)
+++.+......+..+.+... ..++.++|... ...++++++++++++++++.+.|+++ |+++.. +.+++++|++++
T Consensus 243 ~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 319 (407)
T 2dkj_A 243 LGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEA--LQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLR 319 (407)
T ss_dssp HHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECG
T ss_pred HHHHHHhhhcccccCCCcHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECc
Confidence 99998887655544443343 33556666641 13678899999999999999999988 888764 356777899887
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC------CCCCcEEEEee------cCHHHHHHHHHHHHHHHHh
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF------GDDTCIRISYA------ASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f------~~~~~iRis~~------~~~e~i~~~~~~l~~~l~~ 464 (471)
.. + .+..++.+.|.+ +||.+.+|..| +.++++|++++ .+++++++++++|++++++
T Consensus 320 ~~-~---------~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 320 PK-G---------LTGKEAEERLDA-VGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp GG-T---------CCHHHHHHHHHH-TTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cc-C---------CCHHHHHHHHHH-cCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 42 0 157788888755 59999998754 23578999996 5889999999999999876
No 117
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=4.5e-34 Score=286.82 Aligned_cols=329 Identities=16% Similarity=0.145 Sum_probs=251.1
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEE
Q 012095 105 PDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVII 184 (471)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv 184 (471)
.+.++|+.+.+++.+.. ..+|.+ +..++.+.+.+.+.+.+|.+ .+++|++|+|+++++..++++++++||+|++
T Consensus 30 ~p~~~~~~v~~a~~~~~---~~~~~~--~~~~~~~~l~~~la~~~~~~-~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~ 103 (393)
T 3kgw_A 30 GPSNLAPRVLAAGSLRM---IGHMQK--EMLQIMEEIKQGIQYVFQTR-NPLTLVVSGSGHCAMETALFNLLEPGDSFLT 103 (393)
T ss_dssp SCCCCCHHHHHHTTCCC---CCTTSH--HHHHHHHHHHHHHHHHHTCC-CSEEEEESCCTTTHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCCHHHHHHhcccc---cCcccH--HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCcHHHHHHHHHhcCCCCCEEEE
Confidence 34456778887776532 122322 22455556666666666753 3346999999999999999999999999999
Q ss_pred cCCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012095 185 PAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (471)
Q Consensus 185 ~~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~ 261 (471)
+.++|.+ +...++..|++++.++++.+ +.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++|
T Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~- 177 (393)
T 3kgw_A 104 GTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRY- 177 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT-
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHc-
Confidence 9888743 35678889999999998643 46899999999987 8999999999999999999 88999999999
Q ss_pred CeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh------------
Q 012095 262 RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------------ 329 (471)
Q Consensus 262 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~------------ 329 (471)
|++||+||+|.... ... ... ..+..+++.|+||.++ ++.++||+++++++++.+.....
T Consensus 178 ~~~li~De~~~~g~----~~~---~~~-~~~~d~~~~s~sK~~~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
T 3kgw_A 178 QCLLLVDSVASLGG----VPI---YMD-QQGIDIMYSSSQKVLN-APPGISLISFNDKAKYKVYSRKTKPVSFYTDITYL 248 (393)
T ss_dssp TCEEEEECTTTTTT----SCC---CTT-TTTCCEEEEESSSTTC-CCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred CCEEEEECCccccC----ccc---chh-hcCCCEEEecCccccc-CCCceeEEEECHHHHHHHhccCCCCCceeecHHHH
Confidence 99999999987421 111 111 1345688999999774 33449999999999988865321
Q ss_pred -----------cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc----ceEEeE
Q 012095 330 -----------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFI 394 (471)
Q Consensus 330 -----------~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~----g~~~~~ 394 (471)
....+++...+.++.++++.. .+.++++++++++++++++.+.|+++ |+++..+.+ ++++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 325 (393)
T 3kgw_A 249 AKLWGCEGETRVIHHTTPVTSLYCLRESLALI--AEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTV 325 (393)
T ss_dssp HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEE
T ss_pred HHhhhhccccCCCCCCCCHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEE
Confidence 112356777777777777641 12347889999999999999999998 887764433 566778
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-ec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
.+++.. +..++.+.|++++||.+.+|..+..++++|+++ +. +++++++++++|++++++++.+
T Consensus 326 ~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 326 TVPAGY-----------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp ECCTTB-----------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred eCCCCC-----------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 886532 678999999887799999998777788999998 53 8999999999999999887643
No 118
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=9.3e-35 Score=290.56 Aligned_cols=320 Identities=13% Similarity=0.127 Sum_probs=244.5
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcC---CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREG---FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQ 166 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 166 (471)
.|..++||+.|.+ .++ +++.+.+++.+++.+. ...| +..+..++++.+++++ |. +++|++|+|+++
T Consensus 26 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g~---~~~v~~~~g~t~ 97 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----WT---EGKVFFANSGTE 97 (375)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----SS---CEEEEEESSHHH
T ss_pred CCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----CC---CCeEEEeCchHH
Confidence 4667999999984 566 6889999999888653 2356 5566778888887774 53 389999999999
Q ss_pred HHHHHHHH---hc---CCC-CeEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCcCCHHHHHhhhc
Q 012095 167 SILQAVLA---VC---SPG-DEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 167 al~~~~~~---l~---~~g-d~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
++..++++ ++ +|| |+|++++|+|+.+...+...+.. +..++. .|+++|+++++
T Consensus 98 a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 170 (375)
T 2eh6_A 98 SVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLD 170 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHHhc
Confidence 99998865 45 788 99999999999987766554432 223321 48999999998
Q ss_pred cCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 227 EKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 227 ~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
+++++|++++|+||||.+ .+.+++++|.++|++| +++||+||+|.++.+.+.. ..+..+.. ..+++ ||||.++
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~-~~~~~~~~-~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEK-DVLLIIDEVQTGIGRTGEF-YAYQHFNL-KPDVI---ALAKGLG 244 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGGTC-CCSEE---EECGGGG
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCCcc-hhhhhcCC-CCCEE---EEccccc
Confidence 889999999999999998 5689999999999999 9999999999976443321 12222221 12222 8999998
Q ss_pred ccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 306 MTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+|+|+||+++++++++.+.......+++.+++.|.++.++|+. .+ +..++++++++++.+.|++++ ....
T Consensus 245 -~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~---~~~~~~~~~~~~l~~~L~~~~-~~~~- 314 (375)
T 2eh6_A 245 -GGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDE----VE---KLLPHVREVGNYFKEKLKELG-KGKV- 314 (375)
T ss_dssp -TTSCCEEEEEEHHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHTT-SSEE-
T ss_pred -CCCCeEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHH----HH---HHHHHHHHHHHHHHHHHHHHh-cCCc-
Confidence 7999999999998887766532334566789999988888874 22 677888889999999998873 3333
Q ss_pred CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
+..++++|++++. +..++++.|++ .||.+.|+. ++++|++++. +++++++++++|+++
T Consensus 315 ~~~g~~~~~~~~~-------------~~~~~~~~l~~-~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 315 KGRGLMLGLELER-------------ECKDYVLKALE-KGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp EEETTEEEEECSS-------------CCHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred eEEEEEEEEEEcC-------------cHHHHHHHHHH-CCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3346678888863 45678998886 599999863 5789999873 899999999999875
No 119
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=4.4e-34 Score=291.36 Aligned_cols=360 Identities=12% Similarity=0.088 Sum_probs=238.7
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.| .+.++. ++.+++++.+++.+. ..|.+..+..++++++++++.+.++ ...++|++|+|+++++.
T Consensus 27 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~~ 103 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIGHGRAEVGERMAAQAARL-PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEATE 103 (430)
T ss_dssp TSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHC-CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhc-ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHHHH
Confidence 46779999988 455554 889999999988763 3454556778899999999988877 35679999999999999
Q ss_pred HHHHHhc--------CCCCeEEEcCCCCCChHHHHHHcCCE---------------EEEecCCCC-CCCcCCHHHHHhhh
Q 012095 170 QAVLAVC--------SPGDEVIIPAPFWVSYPEMARIADAT---------------PVILPTRIS-ENFLLDPKVLESKL 225 (471)
Q Consensus 170 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~G~~---------------~~~v~~~~~-~~~~ld~e~l~~~l 225 (471)
.++++++ .++|.|++.+|+|+++...+...+.. +..++.+.. .....|+++|++++
T Consensus 104 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l 183 (430)
T 3i4j_A 104 SAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALL 183 (430)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHH
Confidence 9999886 34789999999999988665554442 222222110 00123668898888
Q ss_pred cc---CCcEEEEcCC-CC-Cccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 226 TE---KSRLLILCSP-SN-PTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 226 ~~---~~~~i~i~~p-~N-PtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
++ +..++++++| +| ++|. +++++++++|.++|++| |++||+||+|.++.+.+. ...+...++.... +.+
T Consensus 184 ~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~~~~g~-~~~~~~~~~~~~d---i~t 258 (430)
T 3i4j_A 184 EREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA-GIIFIADEVMSGMGRCGS-PLALSRWSGVTPD---IAV 258 (430)
T ss_dssp HHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSS-SSGGGGTTTCCCS---EEE
T ss_pred HhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccc-hhhhhhhcCCCCc---EEE
Confidence 62 3334444455 66 8886 77888999999999999 999999999998765543 1222222011122 346
Q ss_pred CCcccCccc-hhheeeEcCHHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 300 FSKAFAMTG-WRLGYIAGPKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 300 ~SK~~g~~G-~R~G~v~~~~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
|||.++ .| ||+||+++++++++.+... ....+++.++++|.++.++|+.... ++++++.++..+..++.+.+.
T Consensus 259 ~sK~l~-~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~ 336 (430)
T 3i4j_A 259 LGKGLA-AGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVER-EDLTGAAKERGAQLLAGLQAL 336 (430)
T ss_dssp ECGGGT-TTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHH
T ss_pred Eccccc-CCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHH
Confidence 999998 69 9999999999999998874 3445677899999999999974211 344555555555666666665
Q ss_pred hcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEee--cCHH
Q 012095 375 FGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYA--ASLT 449 (471)
Q Consensus 375 L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~---~~~~iRis~~--~~~e 449 (471)
+.+++++...++.|.| +++.+.+.... ..+.......++++.|+++ ||.+.|+..+. .++++||+++ .+++
T Consensus 337 ~~~~~~~~~~~~~g~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e 412 (430)
T 3i4j_A 337 QARFPQMMQVRGTGLL-LGVVLGDLATG--QAFETPGIASRIGAAALKR-GLITYPGSGAEPNGRGDHLLLGPPLSITAA 412 (430)
T ss_dssp HHHCTTEEEEEEETTE-EEEEEC--------------CHHHHHHHHHHT-TEECC-----------CEEEECCCTTCCHH
T ss_pred HHhCCCeEEEEEEEEE-EEEEecccccc--CCCccHHHHHHHHHHHHhC-CCEEEecccccCCCCCCEEEEECCCCCCHH
Confidence 5556677776666665 66666431000 0000001246788988865 99999984322 2478999988 4999
Q ss_pred HHHHHHHHHHHHHHhhC
Q 012095 450 TLQAAVERIKKGLLTLR 466 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~~~ 466 (471)
++++++++|+++++++.
T Consensus 413 ~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 413 EVDGLLALLAGALEDVL 429 (430)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998753
No 120
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=4.4e-34 Score=290.49 Aligned_cols=335 Identities=13% Similarity=0.144 Sum_probs=242.3
Q ss_pred cCCCeEEcCCCCC--CCCC--hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGEP--DFDT--PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~--p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+.++|++.|.+ ++++ |+.+++++.+++.+.. .|++..+..+++..+++.+.+.+|.++ +++|++|+|+++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~ 117 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA-HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAI 117 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC-CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc-cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHH
Confidence 4667999999884 4443 6899999999886532 354444556777888888888888543 78999999999999
Q ss_pred HHHHHHhcC-CCCeEEEcCCCCCChHHHHH-HcC-------------CEEEEecCCCC--CCCc------------CCHH
Q 012095 169 LQAVLAVCS-PGDEVIIPAPFWVSYPEMAR-IAD-------------ATPVILPTRIS--ENFL------------LDPK 219 (471)
Q Consensus 169 ~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~~-~~G-------------~~~~~v~~~~~--~~~~------------ld~e 219 (471)
..+++++.. +||.|++.+|+|+++...+. ..| ..++.+|.+.+ .+|+ +|++
T Consensus 118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~ 197 (419)
T 2eo5_A 118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIE 197 (419)
T ss_dssp HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHH
Confidence 999987654 48999999999986554332 222 25677776421 0112 4688
Q ss_pred HHH-hhhcc-----CCcEEEEcCCC-CCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCC
Q 012095 220 VLE-SKLTE-----KSRLLILCSPS-NPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMW 291 (471)
Q Consensus 220 ~l~-~~l~~-----~~~~i~i~~p~-NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 291 (471)
+|+ +++++ +++ +++++|+ ||||. +.+++++++|.++|++| +++||+||+|.++.+.+.. ..+... +..
T Consensus 198 ~l~~~~i~~~~~~~~~~-~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~~~g~~g~~-~~~~~~-~~~ 273 (419)
T 2eo5_A 198 FIEDYIFVNLVPPEEVA-GIFFEPIQGEGGYVIPPKNFFAELQKLAKKY-GILLVDDEVQMGLGRTGKL-FAIENF-NTV 273 (419)
T ss_dssp HHHHTHHHHTCCGGGEE-EEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGG-TCC
T ss_pred HHHHHHHhhccCCCCEE-EEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCcch-hhHHhc-CCC
Confidence 999 88863 344 5556674 67896 67899999999999999 9999999999987654431 111111 112
Q ss_pred CceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDF 370 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~ 370 (471)
.+ +.||||.++ +| +|+||++++++++ .+ ......+++.++++|.++.++|+. .+++++++++++++
T Consensus 274 ~d---~~t~sK~~~-~G~~riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~-------~~~~~~~~~~~~~~ 340 (419)
T 2eo5_A 274 PD---VITLAKALG-GGIMPIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDI-------VKDLLPHVNEIGKI 340 (419)
T ss_dssp CS---EEEECGGGG-TTTSCCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred CC---EEEeccccc-CCccceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
Confidence 22 338999999 59 9999999999988 66 323345667899999999999974 12278889999999
Q ss_pred HHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCH
Q 012095 371 LVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASL 448 (471)
Q Consensus 371 l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~ 448 (471)
+.+.|.++ +...++.|. |+|+++.... .... +++.|+++ ||.+.|+. ++++||+++ .++
T Consensus 341 l~~~L~~~--~~~~~~~g~-~~~i~~~~~~----------~~~~-~~~~l~~~-Gv~v~~~~----~~~lRis~~~~~t~ 401 (419)
T 2eo5_A 341 FAEELQGL--ADDVRGIGL-AWGLEYNEKK----------VRDR-IIGESFKR-GLLLLPAG----RSAIRVIPPLVISE 401 (419)
T ss_dssp HHHHHTTS--SSEEEEETT-EEEEECSCHH----------HHHH-HHHHHHHT-TEECEEET----TTEEEECCCTTCCH
T ss_pred HHHHHHHh--hhheEeeeE-EEEEEEecCc----------cHHH-HHHHHHHC-CCEEecCC----CCEEEEECCCCCCH
Confidence 99999886 444445554 5677873210 0345 88888864 99999974 579999776 499
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012095 449 TTLQAAVERIKKGLLTL 465 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~~ 465 (471)
+++++++++|+++++++
T Consensus 402 e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 402 EEAKQGLDILKKVIKVV 418 (419)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998764
No 121
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=6.2e-34 Score=287.89 Aligned_cols=327 Identities=13% Similarity=0.112 Sum_probs=253.4
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 106 DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 106 ~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
+.++++.+.+++.+.+ ...|. ....++.+.+.+++.+.+|.+ ..+.+++|+|+++++..++++++++||+|+++
T Consensus 21 p~~~~~~v~~a~~~~~---~~~~~--~~~~~~~~~~~~~la~~~~~~-~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~ 94 (411)
T 3nnk_A 21 PINADPRVLRAMSSQL---IGQYD--PAMTHYMNEVMALYRGVFRTE-NRWTMLVDGTSRAGIEAILVSAIRPGDKVLVP 94 (411)
T ss_dssp CCCCCHHHHHHHTSCC---CCTTC--HHHHHHHHHHHHHHHHHHTCC-CSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCCHHHHHHhhccc---ccccc--HHHHHHHHHHHHHHHHHhCCC-CCcEEEECCCcHHHHHHHHHHhcCCCCEEEEe
Confidence 4455777877776432 12232 233456666666777667753 22348889999999999999999999999999
Q ss_pred CCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 186 APFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 186 ~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
+|+|.+ +...++..|++++.++++ .++.+|+++|++++++ ++++|++++|+||||.+++ +++|.++|++| |
T Consensus 95 ~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~ 168 (411)
T 3nnk_A 95 VFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRY-D 168 (411)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH-T
T ss_pred cCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHc-C
Confidence 999977 888899999999999985 3566899999999986 8999999999999999999 88999999999 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH--------------
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------- 328 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~-------------- 328 (471)
++||+||+|.... ... ... ..+..+++.|++|.++ ++.++||+++++++++.+....
T Consensus 169 ~~li~Dea~~~~~----~~~---~~~-~~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg 239 (411)
T 3nnk_A 169 ALFYTDATASLGG----NPL---ETD-VWGLDAVSAGMQKCLG-GPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDG 239 (411)
T ss_dssp CEEEEECTTTBTT----BCC---CTT-TTTCSEEECCSTTTTC-CCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCC
T ss_pred CEEEEECCcccCC----ccc---chh-ccCCcEEEecCccccC-CCCceEEEEECHHHHHHHhhcccccccccccccccc
Confidence 9999999987421 111 111 1345699999999853 3446899999999998887543
Q ss_pred ----------------------hcccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 329 ----------------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 329 ----------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 315 (411)
T 3nnk_A 240 DEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARL---ILQEGLDYGIARHKLHGDALVKGIQAM-GLETFG 315 (411)
T ss_dssp SSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCS
T ss_pred cCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCC
Confidence 112235677777777777764 2444 7889999999999999999988 888776
Q ss_pred CCc---ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-ec--CHHHHHHHHHHHH
Q 012095 386 PQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY-AA--SLTTLQAAVERIK 459 (471)
Q Consensus 386 p~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~-~~--~~e~i~~~~~~l~ 459 (471)
+.+ ++++++.+|+. .+..++.+.|++++||.+.+|.....++++|+++ +. +++++++++++|+
T Consensus 316 ~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~ 384 (411)
T 3nnk_A 316 DLKHKMNNVLGVVIPQG-----------INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALE 384 (411)
T ss_dssp CGGGBCSSEEEEECCTT-----------CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred CcccccccEEEEECCCC-----------CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHH
Confidence 654 56788888743 2678999999887799999986555568999998 53 7899999999999
Q ss_pred HHHHhhCCC
Q 012095 460 KGLLTLRPG 468 (471)
Q Consensus 460 ~~l~~~~~~ 468 (471)
++++++...
T Consensus 385 ~~l~~~~~~ 393 (411)
T 3nnk_A 385 AVLNYLKFP 393 (411)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHcCCC
Confidence 999876543
No 122
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=1.1e-34 Score=292.55 Aligned_cols=329 Identities=14% Similarity=0.130 Sum_probs=246.0
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|. .+++ +++.+.+++.+++..... ++ .....++++.+++.+.+.+| .+++++|+|+++++.
T Consensus 38 ~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~-~~-~~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a~~ 111 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH-CS-NLFWNRPQMELAELLSKNTF----GGKVFFANTGTEANE 111 (397)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC-CC-TTSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHHHH
T ss_pred CCCEEEECCccccccccCCCCHHHHHHHHHHHHhccc-Cc-cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHH
Confidence 466789998873 3333 478899999998876322 21 11224566677777766665 479999999999999
Q ss_pred HHHHHhcC------CC-CeEEEcCCCCCCh-HHHHHHcCCE------------EEEecCCCCCCCcCCHHHHHhhhccCC
Q 012095 170 QAVLAVCS------PG-DEVIIPAPFWVSY-PEMARIADAT------------PVILPTRISENFLLDPKVLESKLTEKS 229 (471)
Q Consensus 170 ~~~~~l~~------~g-d~Vlv~~p~y~~~-~~~~~~~G~~------------~~~v~~~~~~~~~ld~e~l~~~l~~~~ 229 (471)
.+++++.. +| +.|++.+|+|++. ...++..|.+ ++.++. .|+++|++++++++
T Consensus 112 ~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~~ 184 (397)
T 2ord_A 112 AAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSEDV 184 (397)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTTE
T ss_pred HHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcCe
Confidence 99988763 54 7899999999664 4477778876 666764 28999999998889
Q ss_pred cEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 230 RLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
++|++++|+||||. +++.+++++|+++|++| +++||+||+|.++.+.+. ...+..+....+ +.||||.++ +|
T Consensus 185 ~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~-~~~~~~~~~~~d----~~s~sK~~~-~G 257 (397)
T 2ord_A 185 CAVFLEPIQGESGIVPATKEFLEEARKLCDEY-DALLVFDEVQCGMGRTGK-LFAYQKYGVVPD----VLTTAKGLG-GG 257 (397)
T ss_dssp EEEEECSEECTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSS-SSHHHHHTCCCS----EEEECGGGG-TT
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCcc-chhhhhhCCCCC----eeeeccccC-CC
Confidence 99999999999999 99999999999999999 999999999997765543 122222221112 228899998 99
Q ss_pred hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCeee
Q 012095 309 WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKMS 384 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~~~ 384 (471)
+|+||++++++++ .+.......+++.+++.|.++.++|+.. .+ ++++++++++++++.+.|+++ +.+...
T Consensus 258 ~r~G~~~~~~~~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 331 (397)
T 2ord_A 258 VPIGAVIVNERAN-VLEPGDHGTTFGGNPLACRAGVTVIKEL---TK--EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV 331 (397)
T ss_dssp SCCEEEEECSTTC-CCCTTSSCCSSTTCHHHHHHHHHHHHHH---TS--TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred cCeEEEEEchHhc-ccCCCCcCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE
Confidence 9999999998876 5543333456678999999999988752 11 456778888888888888764 222223
Q ss_pred CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 012095 385 EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGL 462 (471)
Q Consensus 385 ~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l 462 (471)
.+. |.|+|++++.. .+..++.+.|++ +||.+.||. ++++|+++. .+++++++++++|++++
T Consensus 332 ~~~-g~~~~~~~~~~-----------~~~~~l~~~l~~-~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l 394 (397)
T 2ord_A 332 RGM-GLMIGIQFREE-----------VSNREVATKCFE-NKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVL 394 (397)
T ss_dssp EEE-TTEEEEEECTT-----------SCHHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEE-eEEEEEEECCh-----------HHHHHHHHHHHH-CCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 344 45577888642 157889999887 499999973 579999965 49999999999999988
Q ss_pred Hh
Q 012095 463 LT 464 (471)
Q Consensus 463 ~~ 464 (471)
++
T Consensus 395 ~~ 396 (397)
T 2ord_A 395 QG 396 (397)
T ss_dssp HT
T ss_pred hh
Confidence 64
No 123
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-33 Score=285.54 Aligned_cols=325 Identities=13% Similarity=0.137 Sum_probs=249.3
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE-EeCChHHHHHHHHHHhcCCCCeEEEc
Q 012095 107 FDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL-VSNGAKQSILQAVLAVCSPGDEVIIP 185 (471)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~-it~G~~~al~~~~~~l~~~gd~Vlv~ 185 (471)
.+.++.+.+++.+. ....|+ ....++.+.+.+.+.+.+|. ++++++ +++|+++++..+++++++|||+|+++
T Consensus 20 ~~~~~~v~~a~~~~---~~~~~~--~~~~~~~~~l~~~la~~~g~--~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~ 92 (416)
T 3isl_A 20 VEVDPRVLRVMSTP---VVGQFD--PAFTGIMNETMEMLRELFQT--KNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIP 92 (416)
T ss_dssp CCCCHHHHHHTTSC---CCCTTS--HHHHHHHHHHHHHHHHHTTC--CCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCcCHHHHHHhccc---CCCCcc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEe
Confidence 34466666655441 122332 22355666677777777774 456565 88899999999999999999999999
Q ss_pred CCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 186 APFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 186 ~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
+|+|.+ +...++..|++++.++++.+ +.+|+++++++++ +++++|++++|+||||.+++ +++|.++|++| |
T Consensus 93 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~ 166 (416)
T 3isl_A 93 IYGRFGYLLTEIAERYGANVHMLECEWG--TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTE-D 166 (416)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHT-T
T ss_pred cCCcccHHHHHHHHhcCCeeEEEecCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHc-C
Confidence 999987 66788999999999998743 4689999999998 68999999999999999999 88999999999 9
Q ss_pred eEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH--------------
Q 012095 263 LLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ-------------- 328 (471)
Q Consensus 263 ~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~-------------- 328 (471)
++||+|++|..... ... +. ..+..+++.|++|.++ ++.++||+++++++++.+...+
T Consensus 167 ~~li~D~a~~~~~~----~~~---~~-~~~~d~~~~s~~K~l~-g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~ 237 (416)
T 3isl_A 167 ALFIVDAVATIGGC----EVK---VD-EWKIDAAIGGTQKCLS-VPSGMAPITYNERVADVIAARKKVERGIATQADRAA 237 (416)
T ss_dssp CEEEEECTTTTTTS----CCC---TT-TTTCSEEECCSSSTTC-CCSSEEEEEECHHHHHHHHTC---------------
T ss_pred CEEEEECCccccCC----Ccc---hh-hcCCCEEEecCccccC-CCCCeEEEEECHHHHHHhhccccccccccccccchh
Confidence 99999999874221 111 11 1345699999999753 4446899999999998876321
Q ss_pred ------------------------hcccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 329 ------------------------SQFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 329 ------------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
.....+++...+.++.++++. ..++ +++++++++++++++.+.|+++ |+++
T Consensus 238 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 313 (416)
T 3isl_A 238 LSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRL---VLEEGLETRFERHRHHEAALAAGIKAM-GLRL 313 (416)
T ss_dssp ---CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred ccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEe
Confidence 111235677777777777775 3455 8899999999999999999986 8888
Q ss_pred eCCCc---ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHH
Q 012095 384 SEPQG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVER 457 (471)
Q Consensus 384 ~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~ 457 (471)
..+.+ +.++++.+++. .+..++.+.|++++||.+.+|.....++++|+++.. +++++++++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~ 382 (416)
T 3isl_A 314 FGDDSCKMPVVTCVEIPGG-----------IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAG 382 (416)
T ss_dssp CSCGGGBCTTEEEEECCTT-----------CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred ccCccccCCcEEEEeCCCC-----------CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHH
Confidence 77654 56678888643 268899999988779999999866667899999943 44459999999
Q ss_pred HHHHHHhhCCC
Q 012095 458 IKKGLLTLRPG 468 (471)
Q Consensus 458 l~~~l~~~~~~ 468 (471)
|+++++++...
T Consensus 383 l~~~~~~~~~~ 393 (416)
T 3isl_A 383 LEAVLLRHNAG 393 (416)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 99999876543
No 124
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=1.8e-33 Score=282.80 Aligned_cols=322 Identities=17% Similarity=0.236 Sum_probs=246.1
Q ss_pred CCCCCCCC-h---HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-c
Q 012095 102 AGEPDFDT-P---VLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-C 176 (471)
Q Consensus 102 ~g~~~~~~-p---~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~ 176 (471)
.++|+|++ | +.+++++.+++..+...|.+..+..++++.++++++ ..++|++++| ++++..+++++ +
T Consensus 4 ~~~p~f~~~p~~~~~~~~a~~~~l~~~~~~~~~~~~~~~l~~~la~~~~-------~~~~i~~~sG-t~al~~~l~~l~~ 75 (388)
T 1b9h_A 4 RKAPEFPAWPQYDDAERNGLVRALEQGQWWRMGGDEVNSFEREFAAHHG-------AAHALAVTNG-THALELALQVMGV 75 (388)
T ss_dssp -CCCCCCCSSCCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHHHHHHTT-------CSEEEEESCH-HHHHHHHHHHTTC
T ss_pred ccCCCCCCCCCCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHHHHHHhC-------CCeEEEeCCH-HHHHHHHHHHcCC
Confidence 45788887 7 899999999988765567788889999999999863 2256777776 89999999999 8
Q ss_pred CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
++||+|+++.|+|+++...++..|++++.++++++ +|.+|+++|++++++++++|+ |+||||.+.+ +++|.++
T Consensus 76 ~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~l 148 (388)
T 1b9h_A 76 GPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKI 148 (388)
T ss_dssp CTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHH
T ss_pred CCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHH
Confidence 99999999999999999999999999999999753 478999999999988888766 9999999998 8999999
Q ss_pred HHhCCCeEEEEccCCCcc-ccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH-H--HHHHHHHHhc--
Q 012095 257 VAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH-F--VAACNKIQSQ-- 330 (471)
Q Consensus 257 ~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~-~--i~~l~~~~~~-- 330 (471)
|++| +++||+|++|..+ .+.+. .+..+ .++.+.||||..+++|.|+||++++++ + ++.+......
T Consensus 149 a~~~-~~~li~D~a~~~g~~~~~~---~~~~~-----~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~ 219 (388)
T 1b9h_A 149 SADT-GVPLLQDAAHAHGARWQGK---RVGEL-----DSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGR 219 (388)
T ss_dssp HHHH-TCCBCEECTTCTTCEETTE---EGGGS-----SSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTC
T ss_pred HHHc-CCEEEEecchhcCCccCCe---ecccc-----cceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCC
Confidence 9999 9999999999863 33221 12222 158899999777777889999999876 5 5666544321
Q ss_pred -------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC------CCcceE
Q 012095 331 -------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE------PQGAFY 391 (471)
Q Consensus 331 -------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~------p~~g~~ 391 (471)
.++.++.+...++... .+++++.+++++++++++.+.|++++|+.+.. +.++++
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~a~~~~~-------~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~ 292 (388)
T 1b9h_A 220 PRDDRRYFHKIAGSNMRLNEFSASVLRAQ-------LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYM 292 (388)
T ss_dssp CTTCSSCCCCSCCCBCBCBHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSE
T ss_pred CccCccceeecccccCCcCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEE
Confidence 0111333332222222 34467788888999999999999988888765 356788
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----------C-------------------CCcEEE
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----------D-------------------DTCIRI 442 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----------~-------------------~~~iRi 442 (471)
+|++++...+ .+..++.+.|.++ ||.+.++.... . .+.+||
T Consensus 293 ~~~~~~~~~~---------~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 362 (388)
T 1b9h_A 293 AMFRIPGLTE---------ERRNALVDRLVEA-GLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWL 362 (388)
T ss_dssp EEEECTTCCH---------HHHHHHHHHHHHT-TCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEE
T ss_pred EEEEeCCcCc---------ccHHHHHHHHHHC-CCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEe
Confidence 9999874200 0456788888865 99998875321 0 125999
Q ss_pred Eeec---CHHHHHHHHHHHHHHHHh
Q 012095 443 SYAA---SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 443 s~~~---~~e~i~~~~~~l~~~l~~ 464 (471)
++.. ++++++++++.|++++++
T Consensus 363 ~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 363 HHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp EGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 9875 789999999999998764
No 125
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=100.00 E-value=1.3e-32 Score=279.99 Aligned_cols=332 Identities=14% Similarity=0.128 Sum_probs=249.2
Q ss_pred CCCeE--EcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 94 GVSVI--RLAAGEPDFDTPVLIAEAGINAIREGFTRYTP-NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 94 g~~~i--~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~-~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
|.+++ +|+.|+|++++|+.+++++.+++..+ .|++ ..+..+|+++++++++ .+++++|+|+++++..
T Consensus 13 g~~~~~~~l~~~~p~~~~p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~ 82 (424)
T 2po3_A 13 GPAAFDQPLLVGRPNRIDRARLYERLDRALDSQ--WLSNGGPLVREFEERVAGLAG--------VRHAVATCNATAGLQL 82 (424)
T ss_dssp CCCSCSSCEETTCCCCCCHHHHHHHHHHHHHHT--CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHH
T ss_pred CCccccccccccCCCCCChHHHHHHHHHHHhcC--CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHH
Confidence 44444 68999999999999999999988764 5866 6788999999999973 2589999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHH
Q 012095 171 AVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (471)
Q Consensus 171 ~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l 250 (471)
+++++. +||+|++++|+|+++...++..|++++.+++++ ++|.+|+++|++++++++++|+++ ||||...+ +
T Consensus 83 ~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~~~~---l 154 (424)
T 2po3_A 83 LAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGRPCA---A 154 (424)
T ss_dssp HHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGCCCC---H
T ss_pred HHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCCcCC---H
Confidence 999885 899999999999999999999999999999875 467899999999998889988875 48999877 9
Q ss_pred HHHHHHHHhCCCeEEEEccCCC-ccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHH
Q 012095 251 DEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQ 328 (471)
Q Consensus 251 ~~i~~l~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~ 328 (471)
++|.++|++| +++||+||+|. ++.+++. ++..+ .+ +++.||||..+++|+|+||++++ +++++.+....
T Consensus 155 ~~i~~la~~~-~~~li~Dea~~~g~~~~~~---~~~~~---~d--i~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~ 225 (424)
T 2po3_A 155 DQLRKVADEH-GLRLYFDAAHALGCAVDGR---PAGSL---GD--AEVFSFHATKAVNAFEGGAVVTDDADLAARIRALH 225 (424)
T ss_dssp HHHHHHHHHT-TCEEEEECTTCTTCEETTE---ETTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCEEEEECccccCCeECCe---ecccc---cC--EEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHH
Confidence 9999999999 99999999999 4655432 22222 12 89999996666677999999999 89999888765
Q ss_pred hcccCC---------CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcc---eEE-eE
Q 012095 329 SQFTSG---------ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGA---FYL-FI 394 (471)
Q Consensus 329 ~~~~~~---------~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g---~~~-~~ 394 (471)
.....+ ...+.+.++..++.. .+++++..++.+++++++.+.|.+++|+.+.. |.++ +++ ++
T Consensus 226 ~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~----~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i 301 (424)
T 2po3_A 226 NFGFDLPGGSPAGGTNAKMSEAAAAMGLTS----LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIV 301 (424)
T ss_dssp BTTTTCTTCCTTCCCBCCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEE
T ss_pred hcCccccccccccCcCCCcCHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEE
Confidence 432111 001223333333332 34566777888888889999999888888765 4443 333 36
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--------------CCCc-------EEEEeec--CHHHH
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--------------DDTC-------IRISYAA--SLTTL 451 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--------------~~~~-------iRis~~~--~~e~i 451 (471)
.+++.. .+ .+..++.+.|.+ .||.+.+..... .+++ ||+++.. +++++
T Consensus 302 ~~~~~~----~~----~~~~~l~~~L~~-~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t~e~i 372 (424)
T 2po3_A 302 EIDEAT----TG----IHRDLVMEVLKA-EGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIGDDDI 372 (424)
T ss_dssp EECHHH----HS----SCHHHHHHHHHH-TTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCCHHHH
T ss_pred EECCcc----ch----hhHHHHHHHHHH-CCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCCHHHH
Confidence 665300 00 157788887765 599998732100 0122 6676333 89999
Q ss_pred HHHHHHHHHHHHhh
Q 012095 452 QAAVERIKKGLLTL 465 (471)
Q Consensus 452 ~~~~~~l~~~l~~~ 465 (471)
++++++|++++++.
T Consensus 373 ~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 373 RRVADLLRLCATRG 386 (424)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988653
No 126
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=6e-34 Score=287.73 Aligned_cols=334 Identities=13% Similarity=0.138 Sum_probs=250.1
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|. ..++ .++.+.+++.+++.+... ++ .....+..+.+++++.+.+| .++|++|+|+++++.
T Consensus 37 ~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~-~~-~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~~a~~ 110 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWH-TG-NGYTNEPVLRLAKKLIDATF----ADRVFFCNSGAEANE 110 (406)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSC-CC-TTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccc-cc-CCcCCHHHHHHHHHHHhhCC----CCeEEEeCcHHHHHH
Confidence 577899999883 3333 378899999998865322 11 11223456666666666655 359999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.++++++. +| |.|++++|+|+.+...+...+. .+..+|. .|+++|+++++++
T Consensus 111 ~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 183 (406)
T 4adb_A 111 AALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS 183 (406)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC
Confidence 99998865 66 9999999999998766655554 3334432 3899999999988
Q ss_pred CcEEEEcCCCCCcccCC--CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc
Q 012095 229 SRLLILCSPSNPTGSVY--PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~--~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++|+++ |+||||.++ +.+++++|+++|++| |++||+||+|.++.+.+... .+.... ...+++ ||||.++
T Consensus 184 ~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~-~~~~~~-~~~d~~---t~sK~~~- 255 (406)
T 4adb_A 184 TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRH-NALLIFDEVQTGVGRTGELY-AYMHYG-VTPDLL---TTAKALG- 255 (406)
T ss_dssp EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-HHHHHT-CCCSEE---EECGGGG-
T ss_pred eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhH-HHHhcC-CCCCEE---Eechhhc-
Confidence 9988888 999999988 999999999999999 99999999999876654321 111111 122333 6899999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCe
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVK 382 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~ 382 (471)
+|+|+||+++++++++.+.......+++.+++.|.++.++|+... . ++..++++++++++.+.|+++ +.+.
T Consensus 256 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 330 (406)
T 4adb_A 256 GGFPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELIN---T--PEMLNGVKQRHDWFVERLNTINHRYGLFS 330 (406)
T ss_dssp TTSCCEEEEECHHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHS---S--HHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCeEEEEEcHHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---h--cCHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 999999999999999888776666677899999999999987521 1 566777788888888887764 1121
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~ 460 (471)
.. +..++++|+.++.... .+..++++.|+++ ||.+.|+. ++++|++++ .+++++++++++|++
T Consensus 331 ~~-~~~g~~~~~~~~~~~~---------~~~~~~~~~l~~~-gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~ 395 (406)
T 4adb_A 331 EV-RGLGLLIGCVLNADYA---------GQAKQISQEAAKA-GVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAA 395 (406)
T ss_dssp EE-EEETTEEEEEECTTTT---------TCHHHHHHHHHHT-TEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EE-EEEEEEEEEEEeCCcH---------HHHHHHHHHHHHC-CcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 12 2346668888875310 1578899998877 99999965 679999654 499999999999999
Q ss_pred HHHhhCC
Q 012095 461 GLLTLRP 467 (471)
Q Consensus 461 ~l~~~~~ 467 (471)
+++++..
T Consensus 396 ~l~~~~~ 402 (406)
T 4adb_A 396 ACEHFVS 402 (406)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9987654
No 127
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=8.6e-34 Score=289.41 Aligned_cols=350 Identities=12% Similarity=0.085 Sum_probs=242.5
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|.+ +++. ++.+.+++.+++.+... + ...+..+++..+++.+.+.++. ++++|++|+|+++++.
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~-~~~~~~~~~~~l~~~la~~~~~--~~~~v~~~~gg~ea~~ 116 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDH-L-FSEMLSRPVVDLATRLANITPP--GLDRALLLSTGAESNE 116 (433)
T ss_dssp TCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCC-C-CTTCCCHHHHHHHHHHHHHSCT--TCCEEEEESCHHHHHH
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcc-c-ccccCCHHHHHHHHHHHHhCCC--CcCEEEEeCchHHHHH
Confidence 4677899988774 4443 78999999998876422 2 2334456778888888877774 5689999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc--------------CCEEEEecCCCCCCCc--------CCHHHHHhhh
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA--------------DATPVILPTRISENFL--------LDPKVLESKL 225 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~--------------G~~~~~v~~~~~~~~~--------ld~e~l~~~l 225 (471)
.+++.+. ..+|.|++.+|+|+++...+... |+..+.++......|+ +|+++|++++
T Consensus 117 ~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l 196 (433)
T 1zod_A 117 AAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLI 196 (433)
T ss_dssp HHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHH
Confidence 9988653 23589999999998766543322 3333333321111222 4699999988
Q ss_pred cc----CCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEe
Q 012095 226 TE----KSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVN 298 (471)
Q Consensus 226 ~~----~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~ 298 (471)
++ ++++ ++++| +||||. +.+++++++|.++|++| +++||+||+|.++.+.+... ....... .. +.
T Consensus 197 ~~~~~~~~~~-vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~g~~g~~~~~~~~~~~---~d---i~ 268 (433)
T 1zod_A 197 DRQSSGNLAA-FIAEPILSSGGIIELPDGYMAALKRKCEAR-GMLLILDEAQTGVGRTGTMFACQRDGVT---PD---IL 268 (433)
T ss_dssp HHHCCSCEEE-EEECSEETTTTCEECCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCC---CS---EE
T ss_pred HhcCCCCeEE-EEEccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCchHhHHhhcCCC---CC---EE
Confidence 63 4444 45566 588995 67899999999999999 99999999999875444211 1111111 11 45
Q ss_pred cCCcccCccchhheeeEcCHHHHHHHHHHHhc--ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 299 GFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQ--FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 299 S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~--~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
||||.++ .|+|+||+++++++++.+...... .+++.++++|.++.++|+.. ++ +...++++++++++.+.|+
T Consensus 269 s~sK~~~-~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~~~l~ 342 (433)
T 1zod_A 269 TLSKTLG-AGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVV---QR--DGLVARANVMGDRLRRGLL 342 (433)
T ss_dssp EECHHHH-TTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHH
T ss_pred Eeccccc-CCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHHHHHH
Confidence 8999999 599999999999999988763222 56678999999998888641 11 2345556666666666665
Q ss_pred CC----CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHH
Q 012095 377 EL----EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTT 450 (471)
Q Consensus 377 ~~----~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~ 450 (471)
++ +.+...++.|. |+|+++++....... ...+..++++.|+++ ||.+.||..|+.++++||+++ .++++
T Consensus 343 ~l~~~~~~~~~~~~~g~-~~~i~~~~~~~~~~~---~~~~~~~~~~~l~~~-Gv~v~~~~~~~~~~~lRi~~~~~~t~~~ 417 (433)
T 1zod_A 343 DLMERFDCIGDVRGRGL-LLGVEIVKDRRTKEP---ADGLGAKITRECMNL-GLSMNIVQLPGMGGVFRIAPPLTVSEDE 417 (433)
T ss_dssp HHHHHCTTEEEEEEETT-EEEEEEEEETTTTEE---CTTHHHHHHHHHHHT-TEECCEECCTTSCCEEEECCCTTCCHHH
T ss_pred HHHHhCCCeEEEEEEEE-EEEEEEecCccccCC---ChHHHHHHHHHHHHC-CCeEeccCCCCCCCEEEEECCcCCCHHH
Confidence 53 44444445544 567887632100000 001367889988865 999999988875689999765 49999
Q ss_pred HHHHHHHHHHHHHhh
Q 012095 451 LQAAVERIKKGLLTL 465 (471)
Q Consensus 451 i~~~~~~l~~~l~~~ 465 (471)
+++++++|+++++++
T Consensus 418 i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 418 IDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998764
No 128
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=100.00 E-value=6e-34 Score=293.35 Aligned_cols=369 Identities=16% Similarity=0.168 Sum_probs=260.5
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC------CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP------DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~------~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~ 143 (471)
.++..+.++++..+...+..+...|.++++|+.|.+ ++++ +.+.+++.+++..+...|++..+..+|++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~ 87 (467)
T 1ax4_A 9 FRIKMVEKIRVPSREEREAALKEAGYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGDEAYAGSRNYYDLKDKAKE 87 (467)
T ss_dssp EEEEEEEECCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCCCCSSSCHHHHHHHHHHHH
T ss_pred hhhceeecccccchhHHHHHHHhcCcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcccccccCccHHHHHHHHHH
Confidence 455666666665566666667677777777777764 2222 567777777776666689888888999999999
Q ss_pred HHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC----CCCe---EEEcCCCCCChHHHHHHcCCEEEEecCCC----C-
Q 012095 144 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS----PGDE---VIIPAPFWVSYPEMARIADATPVILPTRI----S- 211 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~----~gd~---Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~----~- 211 (471)
++. .++|++|+|+++++..+++++++ +||+ |+++.+.|..+...+...|++++.++... +
T Consensus 88 ~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (467)
T 1ax4_A 88 LFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSET 159 (467)
T ss_dssp HHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTS
T ss_pred HcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccc
Confidence 872 36999999999999999999988 9999 99987777777888889999998876532 1
Q ss_pred ---CCCcCCHHHHHhhhcc----CCcEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc--c-------
Q 012095 212 ---ENFLLDPKVLESKLTE----KSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH--I------- 274 (471)
Q Consensus 212 ---~~~~ld~e~l~~~l~~----~~~~i~i~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~--~------- 274 (471)
.++.+|+++|++++++ ++++|++++||||| |.+++.+++++|+++|++| |++||+||++.. .
T Consensus 160 ~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~-gi~li~De~~~~~~~~~~~~~~ 238 (467)
T 1ax4_A 160 YDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQH-GIFVVMDSARFCENAYFIKARD 238 (467)
T ss_dssp CCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH-TCCEEEECTTHHHHHHHHHHHC
T ss_pred cCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHc-CCEEEEEchhhhhcchhccccc
Confidence 1346899999999974 68999999999999 8999999999999999999 999999998643 1
Q ss_pred -ccCCCCccccccCC----CCCCceEEEecCCcccCcc-chhheeeEcC-H-HHHHHHHHHHhcc----cCC-CChHHHH
Q 012095 275 -IYAPATHTSFASLP----GMWERTLTVNGFSKAFAMT-GWRLGYIAGP-K-HFVAACNKIQSQF----TSG-ASSISQK 341 (471)
Q Consensus 275 -~~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~g~~-G~R~G~v~~~-~-~~i~~l~~~~~~~----~~~-~~~~~q~ 341 (471)
.+.+. ++..+. ...+ +++.|+||.+|++ | ||++++ + ++++.+......+ .++ .+...+.
T Consensus 239 ~~~~~~---~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (467)
T 1ax4_A 239 PKYKNA---TIKEVIFDMYKYAD--ALTMSAKKDPLLNIG---GLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMA 310 (467)
T ss_dssp GGGTTC---CHHHHHHHHGGGCS--EEEEETTSTTCCSSC---EEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHH
T ss_pred cccCCC---chhhhhhhhccccc--eEEEeccccCCCCcc---eEEEeCCHHHHHHHHHhhccccccccccCCccchHHH
Confidence 12221 111110 0012 5668999999876 4 777777 6 8888877654321 122 2333333
Q ss_pred HHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccC-CcccCCCCCCCHHHHHHHH
Q 012095 342 AGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYG-SEAEGFGKIENSESLCRYL 420 (471)
Q Consensus 342 aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~L 420 (471)
++..+|.... ..+.+ +...++++++.+.|.+ +|+.+..|.+++++|+++..... ....+ .+..++++.|
T Consensus 311 a~~~~l~~~~-~~~~~----~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L 380 (467)
T 1ax4_A 311 AMVQGLEEGT-EEEYL----HYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIPGDQ----FPAQAVINAL 380 (467)
T ss_dssp HHHHHHHHTT-CHHHH----HHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSCGGG----CHHHHHHHHH
T ss_pred HHHHHHHHhh-hhhHH----HHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccccccCC----CCHHHHHHHH
Confidence 3333454311 11222 2334667778888877 48888788999999998322100 00000 1467899988
Q ss_pred HHcCCEEEEC-CCCC-------C-----CCCcEEEEee---cCHHHHHHHHHHHHHHHHhhC
Q 012095 421 LDKAQVALVP-GDAF-------G-----DDTCIRISYA---ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 421 l~~~gV~v~p-g~~f-------~-----~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++.||.+.| |..+ + ..+++||++. .+++++++++++|++++++.+
T Consensus 381 ~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 381 YLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp HHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHHT
T ss_pred HHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhhh
Confidence 5556999999 5431 1 1378999998 489999999999999887653
No 129
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=7.5e-33 Score=284.78 Aligned_cols=358 Identities=12% Similarity=0.030 Sum_probs=257.9
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||++.|. ..++. ++.+++++.+++.+..+.|+...+..++++++++++.+.++ ...++|++|+|+++++.
T Consensus 49 ~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA~~ 126 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDANE 126 (460)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHHHH
Confidence 577899999883 44544 68999999998877555666666777899999999988765 36679999999999999
Q ss_pred HHHHHhcC--------CCCeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCC--C-CCCcCC--------
Q 012095 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRI--S-ENFLLD-------- 217 (471)
Q Consensus 170 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~--~-~~~~ld-------- 217 (471)
.+++++.. +++.|++.+|+|+++...+...+. .+..++... . ++++.+
T Consensus 127 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~ 206 (460)
T 3gju_A 127 TNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHC 206 (460)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHH
Confidence 99998874 459999999999988766554432 234444321 0 112233
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
+++|+++++ +++++|+++.++|++|. +++++++++|.++|++| |++||+||+|.++...+... .......
T Consensus 207 ~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~-~~~~~~~--- 281 (460)
T 3gju_A 207 ADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY-DVLLVADEVVTGFGRLGTMF-GSDHYGI--- 281 (460)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSC-HHHHHTC---
T ss_pred HHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccc-hHhhcCC---
Confidence 688888886 34566666666778886 77899999999999999 99999999999875544211 1111111
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
...+.+|||.++ .| +|+||+++++++++.+... ....+++.++++|.++.++|+.... ++++++.++..
T Consensus 282 -~pdi~t~sK~l~-gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~ 358 (460)
T 3gju_A 282 -KPDLITIAKGLT-SAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDE-MDLVTNAGETG 358 (460)
T ss_dssp -CCSEEEECGGGT-TTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHH
T ss_pred -CCCeeeeehhhc-CCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 111447899997 56 8999999999999998642 3345678899999999999974211 35577777777
Q ss_pred HHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCC-CCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEE
Q 012095 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFG-KIENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 443 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis 443 (471)
+..++.+.+.+.+++++....+.|.| +++.+...... ...+. ......++++.|+++ ||.+.|+. .++++||+
T Consensus 359 ~~~~~~l~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~---~~~~iRi~ 432 (460)
T 3gju_A 359 AYFRAELAKAVGGHKNVGEVRGDGML-AAVEFVADKDD-RVFFDASQKIGPQVATALAAS-GVIGRAMP---QGDILGFA 432 (460)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEETTE-EEEEECSBTTT-TBCCCGGGCHHHHHHHHHHHT-TEECEECS---SSCEEEEC
T ss_pred HHHHHHHHHHHhcCCCeEEEeeeeEE-EEEEEccCccc-cccccchHHHHHHHHHHHHHC-CeEEecCC---CCCEEEEE
Confidence 77888888888888666666666665 56666532100 00000 001256788888876 99999976 35799999
Q ss_pred ee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 444 YA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 444 ~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. .+++++++++++|+++++++.
T Consensus 433 ~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 433 PPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 54 599999999999999998764
No 130
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=2.8e-33 Score=282.60 Aligned_cols=320 Identities=14% Similarity=0.165 Sum_probs=222.9
Q ss_pred EEcCCCCCCCCChHHHHHHHHHHHH---cCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 98 IRLAAGEPDFDTPVLIAEAGINAIR---EGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 98 i~l~~g~~~~~~p~~v~~a~~~~~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
-.++.|+|++.+++.+.+++.+++. +....|....+..+..+.+.+.+.+.+|. + +.++++++++++..++++
T Consensus 23 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~--~~i~~~sG~~a~~~~l~~ 98 (398)
T 2rfv_A 23 STGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERG--E--AGLATASGISAITTTLLT 98 (398)
T ss_dssp TTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTC--S--EEEEESSHHHHHHHHHHH
T ss_pred CCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCC--C--cEEEECCHHHHHHHHHHH
Confidence 3588999999887655555554443 22223322222334444444444444563 2 555666666999999999
Q ss_pred hcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHH
Q 012095 175 VCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLL 250 (471)
Q Consensus 175 l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l 250 (471)
++++||.|++++|+|+++...+ +..|.+++.++.+ |++++++++++++++|++++|+||||.+++ +
T Consensus 99 ~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l 168 (398)
T 2rfv_A 99 LCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD---I 168 (398)
T ss_dssp HCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC---H
T ss_pred HhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC---H
Confidence 9999999999999999988776 7889999999863 899999999989999999999999999998 9
Q ss_pred HHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHH-HHHHHH
Q 012095 251 DEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQ 328 (471)
Q Consensus 251 ~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~-~l~~~~ 328 (471)
++|+++|++| |+++|+||+|..+.+.. . .. .+.++++.|+||.++.+|+|+ ||+++++++++ .+....
T Consensus 169 ~~i~~l~~~~-~~~li~De~~~~~~~~~----~-~~----~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~ 238 (398)
T 2rfv_A 169 ETVAGIAHQQ-GALLVVDNTFMSPYCQQ----P-LQ----LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGL 238 (398)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTCTTTCC----G-GG----GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHH
T ss_pred HHHHHHHHHc-CCEEEEECCCcccccCC----c-hh----hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHH
Confidence 9999999999 99999999999765431 1 11 246699999999998899998 99999999887 666555
Q ss_pred hcc-cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC--------------CCCCeeeCC----Ccc
Q 012095 329 SQF-TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE--------------LEGVKMSEP----QGA 389 (471)
Q Consensus 329 ~~~-~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~--------------~~g~~~~~p----~~g 389 (471)
..+ +.+.+++.+.++.++|+. ...++++.. ++++.+.+.|.+ +|++++..| .++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~----~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~ 311 (398)
T 2rfv_A 239 KDITGGCMSPFNAWLTLRGVKT---LGIRMERHC----ENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGG 311 (398)
T ss_dssp HHTTCCCCCHHHHHHHHHHHTT---HHHHHHHHH----HHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCS
T ss_pred HhCCCCCCCHHHHHHHHhhhhh---HHHHHHHHH----HHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 555 567889999999888874 234444433 344444444433 345554443 456
Q ss_pred eEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC----------------------C-CCcEEEEeec
Q 012095 390 FYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG----------------------D-DTCIRISYAA 446 (471)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~----------------------~-~~~iRis~~~ 446 (471)
++ ++++++.. .+...+.+.+. ..|+.+.+|..|. . ++++|+|++.
T Consensus 312 ~~-~~~~~~~~----------~~~~~l~~~~~-~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 379 (398)
T 2rfv_A 312 II-SFEIAGGL----------EAGRRMINSVE-LCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGL 379 (398)
T ss_dssp EE-EEEETTHH----------HHHHHHHTTCS-SSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCS
T ss_pred EE-EEEEcCCH----------HHHHHHHHhCC-cceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecC
Confidence 64 55776310 01223333322 2388888886542 1 5799999998
Q ss_pred --CHHHHHHHHHHHHH
Q 012095 447 --SLTTLQAAVERIKK 460 (471)
Q Consensus 447 --~~e~i~~~~~~l~~ 460 (471)
++++++++++.|++
T Consensus 380 ~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 380 EDPEDIINDLEHAIRK 395 (398)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 45566665555543
No 131
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.3e-33 Score=280.74 Aligned_cols=334 Identities=13% Similarity=0.087 Sum_probs=246.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|. +.++. ++.+.+++.+++.+..+.| ..+..++++++++++.+.+| .++|++|+|+++++.
T Consensus 34 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea~~ 107 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTESIE 107 (395)
T ss_dssp TCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHHHH
Confidence 577899999984 45553 7899999999887643333 33456778888888877776 479999999999999
Q ss_pred HHHHHhc-------CCCCeEEEcCCCCCChHHHHHHcC-------------CEEEEecCCCCCCCcCCHHHHHhhhccCC
Q 012095 170 QAVLAVC-------SPGDEVIIPAPFWVSYPEMARIAD-------------ATPVILPTRISENFLLDPKVLESKLTEKS 229 (471)
Q Consensus 170 ~~~~~l~-------~~gd~Vlv~~p~y~~~~~~~~~~G-------------~~~~~v~~~~~~~~~ld~e~l~~~l~~~~ 229 (471)
.+++.+. .++|.|++.+|+|+++...+...+ .++..++. .|+++|++++++++
T Consensus 108 ~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~ 180 (395)
T 3nx3_A 108 GAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNEKT 180 (395)
T ss_dssp HHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCTTE
T ss_pred HHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccCCe
Confidence 9988775 457999999999988765444333 34455543 28999999998888
Q ss_pred cEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 230 RLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 230 ~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
++|+++.++|++|.. .+++++++|.++|++| |+++|+||+|.++...+.. ...... +....+.||||.++ .|
T Consensus 181 ~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~-~~~~~~----~~~~d~~t~sK~~~-~G 253 (395)
T 3nx3_A 181 CAIILESVQGEGGINPANKDFYKALRKLCDEK-DILLIADEIQCGMGRSGKF-FAYEHA----QILPDIMTSAKALG-CG 253 (395)
T ss_dssp EEEEEESEECTTSCEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGG----TCCCSEEEECGGGT-TT
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCCcCCcc-hhHHhc----CCCCCEEEeccccc-CC
Confidence 888887777777765 7899999999999999 9999999999987544321 111111 11223557999998 59
Q ss_pred hhheeeEcCHHH-HHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC
Q 012095 309 WRLGYIAGPKHF-VAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ 387 (471)
Q Consensus 309 ~R~G~v~~~~~~-i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~ 387 (471)
+|+||+++++++ ++.+.......+++.+++++.++.++|+... .++++++.++..+..++.+.+.+.+++.+....+.
T Consensus 254 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 332 (395)
T 3nx3_A 254 LSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFK-EEKILENVNKLTPYLEQSLDELINEFDFCKKRKGL 332 (395)
T ss_dssp SCCEEEEECHHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CceEEEEEchhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeE
Confidence 999999999998 8877665445567789999999999887421 13445555555555555555555555555554444
Q ss_pred cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 388 GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 388 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
|.|+|+.+++. .+..++++.|+++ ||.+.|+. ++++|+++.. +++++++++++|++++++
T Consensus 333 -g~~~~~~~~~~-----------~~~~~~~~~l~~~-Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 394 (395)
T 3nx3_A 333 -GFMQGLSLDKS-----------VKVAKVIQKCQEN-ALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALKS 394 (395)
T ss_dssp -TTEEEEEECTT-----------SCHHHHHHHHHHT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -EEEEEEEeCCc-----------chHHHHHHHHHHC-CCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 44578888753 1578899988876 99999974 6799998664 899999999999999875
No 132
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=4.2e-33 Score=283.31 Aligned_cols=332 Identities=12% Similarity=0.139 Sum_probs=246.7
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||++.|. ..++ .++.+.+++.+++.+.. .+ ...+..++++.+++.+.+.+| .++|++|+|+++++.
T Consensus 55 ~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~-~~-~~~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA~~ 128 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLW-HT-SNVFTNEPALRLGRKLIDATF----AERVLFMNSGTEANE 128 (420)
T ss_dssp TCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCC-CC-CTTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhcc-cc-cCccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHHHH
Confidence 577899999884 3333 47889999999886532 22 222345777888888877765 479999999999999
Q ss_pred HHHHHhcC-------CC-CeEEEcCCCCCChHH-HHHHcCCE------------EEEecCCCCCCCcCCHHHHHhhhccC
Q 012095 170 QAVLAVCS-------PG-DEVIIPAPFWVSYPE-MARIADAT------------PVILPTRISENFLLDPKVLESKLTEK 228 (471)
Q Consensus 170 ~~~~~l~~-------~g-d~Vlv~~p~y~~~~~-~~~~~G~~------------~~~v~~~~~~~~~ld~e~l~~~l~~~ 228 (471)
.+++++.. +| +.|++.+|+|+++.. .....|.+ +..++. .|+++|+++++++
T Consensus 129 ~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~ 201 (420)
T 2pb2_A 129 TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH 201 (420)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT
T ss_pred HHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC
Confidence 99998875 77 589999999987754 44555543 445543 2899999999888
Q ss_pred CcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc-ccccCCCCCCceEEEecCCcccCc
Q 012095 229 SRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT-SFASLPGMWERTLTVNGFSKAFAM 306 (471)
Q Consensus 229 ~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~g~ 306 (471)
+++|++++++|++| .+++.+++++|.++|++| |++||+||+|.++.+.+.... ....+. .+++ ||||.++
T Consensus 202 ~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~-gi~lI~Dev~~g~~~~g~~~~~~~~~~~---~dii---t~sK~l~- 273 (420)
T 2pb2_A 202 TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEH-QALLVFDEVQCGMGRTGDLFAYMHYGVT---PDIL---TSAKALG- 273 (420)
T ss_dssp EEEEEECSEETTTTSEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSHHHHHTCC---CSEE---EECGGGG-
T ss_pred ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHc-CCEEEEEcCCcCcccCCcHHHHHhcCCC---CCeE---Eeccccc-
Confidence 99999888889888 479999999999999999 999999999987755443211 111221 2233 7899999
Q ss_pred cchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCe
Q 012095 307 TGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVK 382 (471)
Q Consensus 307 ~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~ 382 (471)
+|+|+||+++++++++.+.......+++.+++++.++.++|+... + +++.++++++++++.+.|+++ +.+.
T Consensus 274 ~G~~iG~~~~~~~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 348 (420)
T 2pb2_A 274 GGFPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIIN---T--PEVLQGIHTKRQQFVQHLQAIDEQFDIFS 348 (420)
T ss_dssp TTSCCEEEEECHHHHTTCC----CCEECCCHHHHHHHHHHHHHHS---S--HHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCCceEEEEEhHHHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHH---h--ccHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 999999999999988877654444566789999999999887521 1 356677778888888877664 3344
Q ss_pred eeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHH
Q 012095 383 MSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKK 460 (471)
Q Consensus 383 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~ 460 (471)
...+.| .|++++++.... .+..++.+.|+++ ||.+.|+. ++++|+++. .+++++++++++|++
T Consensus 349 ~~~~~g-~~~~v~~~~~~~---------~~~~~l~~~l~~~-Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 349 DIRGMG-LLIGAELKPKYK---------GRARDFLYAGAEA-GVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp EEEEET-TEEEEEECGGGT---------TCHHHHHHHHHHT-TEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEEecc-eEEEEEECCCch---------HHHHHHHHHHHHC-CCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 444554 457788864210 1467899998875 99999974 579999965 499999999999999
Q ss_pred HHHhh
Q 012095 461 GLLTL 465 (471)
Q Consensus 461 ~l~~~ 465 (471)
+++++
T Consensus 414 ~l~~~ 418 (420)
T 2pb2_A 414 AVGKV 418 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 133
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=4.7e-33 Score=278.14 Aligned_cols=330 Identities=12% Similarity=0.045 Sum_probs=244.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC 176 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~ 176 (471)
.++|+.| +.++|+.+.+++.+.+. .+|++ +..++.+.+.+++++.+|.+.+.+.+++|+|+++++..++++++
T Consensus 20 ~~~~~pg--p~~~~~~v~~a~~~~~~---~~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~ 92 (376)
T 3f0h_A 20 MLNFTVG--PVMSSEEVRAIGAEQVP---YFRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF 92 (376)
T ss_dssp CEECSSS--SCCCCHHHHHHHTSCCC---CCSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC
T ss_pred ceeecCC--CCCCcHHHHHHhcCCCC---CCCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc
Confidence 3444444 34567888887765431 22322 44577888888888888865333455669999999999999999
Q ss_pred CCCCeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
++||+|++++|.|.++. ..+...|++++.++.+ .++.+|++++++++++++++|++++|+||||.+++ +++|.
T Consensus 93 ~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~ 167 (376)
T 3f0h_A 93 TKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD---TMMIG 167 (376)
T ss_dssp CTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC---HHHHH
T ss_pred CCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC---HHHHH
Confidence 99999999998666544 3577789999999986 35679999999999889999999999999999999 99999
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHh----
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQS---- 329 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~---- 329 (471)
++|++| |++||+|++|..+... ..+.. .+..+++.|+||.++ ++| +|++++++++++.+.....
T Consensus 168 ~l~~~~-~~~li~D~~~~~~~~~----~~~~~----~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~~~~~~~~~ 236 (376)
T 3f0h_A 168 EFCKKN-NMFFVCDCVSAFLADP----FNMNE----CGADVMITGSQKVLACPPG--ISVIVLAPRGVERVEKSKVRTMY 236 (376)
T ss_dssp HHHHHT-TCEEEEECTTTTTTSC----CCHHH----HTCSEEEEETTTTTCCCSS--CEEEEECHHHHHHHHTCCCCCST
T ss_pred HHHHHc-CCEEEEEcCccccCcc----ccccc----cCccEEEecCcccccCCCc--eEEEEECHHHHHHhhcCCCCcee
Confidence 999999 9999999999864221 11111 234588999999997 555 7889999999888764211
Q ss_pred -------------cccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeE
Q 012095 330 -------------QFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFI 394 (471)
Q Consensus 330 -------------~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~ 394 (471)
....+++...+.++.++++. ..+ .+++++++++++++++.+.|+++ |+++..+.....++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~ 312 (376)
T 3f0h_A 237 FDLKDALKNQERGQTPFTPAVGILLQINERLKE---IKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTS 312 (376)
T ss_dssp TCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEE
T ss_pred ecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEE
Confidence 11234455444555555553 122 47888999999999999999988 777665443322222
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
..+.. .+..++.+.|++++||.+.+|.....++++|+++.. +++++++++++|++++++
T Consensus 313 ~~~~~-----------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 313 VHPTT-----------ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp EEESS-----------SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred EeCCC-----------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 22221 267899999988779999998544456899999974 899999999999999875
No 134
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=2.2e-34 Score=290.23 Aligned_cols=333 Identities=15% Similarity=0.106 Sum_probs=231.3
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGF----TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~----~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
..+.|.|..+.+. ++|+.+.+++.+.+.+.. ..|....+..++.+.+.+.+++.+|. ++++|++|+|+++++.
T Consensus 18 ~~~~iyld~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~v~~~~g~t~al~ 94 (400)
T 3vax_A 18 GSHMTYLDAAATT-RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA--EPDELIFTSGATESNN 94 (400)
T ss_dssp ----CCCCCCCCS-SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC--CGGGEEEESCHHHHHH
T ss_pred cCCcEEecCCCCC-CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC--CCCcEEEeCCHHHHHH
Confidence 3457778777765 567888899888875421 11212223345566666666666774 5789999999999999
Q ss_pred HHHHHhc----CCCC-eEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 170 QAVLAVC----SPGD-EVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 170 ~~~~~l~----~~gd-~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
.++++++ ++|| +|++++++|+++...+.. .|++++.++++. ++.+|+++|++++++++++|++++|+|||
T Consensus 95 ~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~npt 172 (400)
T 3vax_A 95 IALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVSLMHVNNET 172 (400)
T ss_dssp HHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEECCSBCTTT
T ss_pred HHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEEEECCCCCc
Confidence 9999998 8999 999999999988766554 599999999864 56789999999999999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE-cCHH-
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-GPKH- 319 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~~~~- 319 (471)
|.+++ +++|.++|++| |++||+||+|.... ....+.. . ..+++.|+||.+|.+| +|+++ ++++
T Consensus 173 G~~~~---l~~i~~la~~~-~~~li~D~a~~~~~----~~~~~~~----~-~d~~~~s~~K~~g~~g--~g~~~~~~~~~ 237 (400)
T 3vax_A 173 GVIQP---VAELAQQLRAT-PTYLHVDAAQGYGK----VPGDLTT----P-IDMISISGHKIGAPKG--VGALVTRRREE 237 (400)
T ss_dssp CBBCC---HHHHHHHHTTS-SCEEEEECTTTTTT----SGGGGGS----C-CSEEEEETGGGTSCSS--CEEEEECBCSS
T ss_pred eeeCc---HHHHHHHHHhc-CCEEEEEhhhhcCC----CCcChhh----c-CcEEEEeHHHhCCCCc--eEEEEEecchh
Confidence 99999 88999999999 99999999998522 1112211 1 4489999999877555 67777 6651
Q ss_pred HH---HHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc-
Q 012095 320 FV---AACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG- 388 (471)
Q Consensus 320 ~i---~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~- 388 (471)
+. ..+... ......+++...+.++.++++. ..+++++.+++++++++++.+.|+ .+|+.+..+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~ 313 (400)
T 3vax_A 238 MDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI---FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDH 313 (400)
T ss_dssp STTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH---HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTS
T ss_pred ccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH---HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCccc
Confidence 11 111111 1122344677777777777764 345688999999999999999999 88998877665
Q ss_pred --ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC-------------------CCcEEEEe-ec
Q 012095 389 --AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD-------------------DTCIRISY-AA 446 (471)
Q Consensus 389 --g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-------------------~~~iRis~-~~ 446 (471)
+.++++.++.. +..++.+.|. + ||.+.+|..|.. ++++||++ +.
T Consensus 314 ~~~~~~~~~~~~~------------~~~~l~~~L~-~-gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~ 379 (400)
T 3vax_A 314 VVPHILNLSFEDV------------DAEAFLVTLK-D-LVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPG 379 (400)
T ss_dssp BCTTEEEEECTTC------------CHHHHHHHHH-H-HHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC
T ss_pred CCCCEEEEEeCCC------------CHHHHHHHHh-c-CcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCC
Confidence 34566677642 6788999887 4 999999865532 38999999 64
Q ss_pred --CHHHHHHHHHHHHHHHHh
Q 012095 447 --SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 447 --~~e~i~~~~~~l~~~l~~ 464 (471)
+++++++++++|++++++
T Consensus 380 ~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 380 QATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp --------------------
T ss_pred CCCHHHHHHHHHHHHHHhcc
Confidence 789999999999988754
No 135
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=8.4e-33 Score=274.47 Aligned_cols=327 Identities=13% Similarity=0.088 Sum_probs=250.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
.+.+.-| +.++|+.+.+++.+++.++...|+ ...+..++.+.+.+++.+.+|.+ ++++|++|+|+++++..+++++
T Consensus 5 ~~~~~p~--p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 5 KIYFTPG--PSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp CEEECSS--SCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHHHHHHH
T ss_pred ceeccCC--CcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHHHHHhc
Confidence 4555544 334567888888887776553332 22344567788888888888864 5689999999999999999999
Q ss_pred cCCCCeEEEcCCCCCC-hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 176 CSPGDEVIIPAPFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+++ +.+++..+.|.. +...++..|++++.++.+ .++.+|+++++ +++++++|++++|+||||.+++ +++|.
T Consensus 82 ~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~---l~~i~ 153 (362)
T 3ffr_A 82 VEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP---VEDIN 153 (362)
T ss_dssp CSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---HHHHT
T ss_pred cCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---HHHHH
Confidence 988 666666667662 334677889999999985 35679999999 7789999999999999999999 88899
Q ss_pred HHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHHHHHHHHHHh----
Q 012095 255 RIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHFVAACNKIQS---- 329 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~i~~l~~~~~---- 329 (471)
++|++|||++||+|++|..+... .. +. +..+++.|+||.++ ++| +|++++++++++.+.....
T Consensus 154 ~la~~~p~~~li~D~a~~~~~~~----~~---~~---~~d~~~~s~~K~~~~~~G--~g~~~~~~~~~~~~~~~~~gg~~ 221 (362)
T 3ffr_A 154 TFRDKNKDALIFVDAVSSLPYPK----FD---WT---KIDSVFFSVQKCFGLPAG--LGVWILNDRVIEKSKALLAKRKS 221 (362)
T ss_dssp TSGGGSTTSEEEEECTTTTTSSC----CC---TT---SCSEEEEETTSTTCCCSC--CEEEEEEHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCCEEEEecccccCCcc----cC---hh---HCcEEEEecccccCCCCc--eEEEEECHHHHHHhhhccccCCC
Confidence 99999867999999999753211 11 11 14488999999998 777 6889999999988876543
Q ss_pred -----------------cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC----Cc
Q 012095 330 -----------------QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QG 388 (471)
Q Consensus 330 -----------------~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----~~ 388 (471)
....+++...+.++.++++.. ....+++.+++++++++++.+.|+++||+++..+ .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~ 299 (362)
T 3ffr_A 222 IGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDM--LQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRS 299 (362)
T ss_dssp CCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHH--HHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBC
T ss_pred CcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcC
Confidence 113456777777777777631 0223688889999999999999999989888753 23
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
++++|+.+++ +..++.+.|.++ ||.+.+|..+..++++|++++. +++++++++++|++++
T Consensus 300 ~~~~~~~~~~-------------~~~~~~~~l~~~-gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 300 MTTIVANTTM-------------LPGEINKILEPF-DMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp SSEEEEEESS-------------CHHHHHHHHGGG-TEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CceEEEecCC-------------CHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 5667888763 477899998877 9999999766667899999986 8899999999998764
No 136
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=2.4e-33 Score=286.62 Aligned_cols=353 Identities=15% Similarity=0.081 Sum_probs=242.9
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-DQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~~~al 168 (471)
.|++++|++.|.+ +++ .++.+.+++.+++.+. ..|+...|..++++++++++.+.++. .. +++++|+|+++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANP-AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSDAN 117 (439)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSC-SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHHHH
Confidence 5778999999987 444 5889999999998764 55766678889999999999888753 33 7999999999999
Q ss_pred HHHHHHh--cCCCCeEEEcCCCCCChHHHHHHcCCE-E--------------EEecCCCCCCCcC-----CHHHHHhhh-
Q 012095 169 LQAVLAV--CSPGDEVIIPAPFWVSYPEMARIADAT-P--------------VILPTRISENFLL-----DPKVLESKL- 225 (471)
Q Consensus 169 ~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~G~~-~--------------~~v~~~~~~~~~l-----d~e~l~~~l- 225 (471)
..+++++ ..+++.|++.+|+|+++...+...+.. . ..+|.+. .+.. |+++|++++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~le~~l~ 195 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP--YRNDPTGDAILTLLTEKLA 195 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC--BTTBTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc--ccccccHHHHHHHHHHHHH
Confidence 9999885 336678888899997766554443322 1 2333321 1111 689999998
Q ss_pred ---ccCCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCC
Q 012095 226 ---TEKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 226 ---~~~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
.+++++|++++++|++|.+. +++++++|.++|++| +++||+||+|.++...+.. ... ...+.... +.|||
T Consensus 196 ~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~g~g~~g~~-~~~-~~~~~~~d---i~s~s 269 (439)
T 3dxv_A 196 AVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAH-GILVVCDEVKVGLARSGRL-HCF-EHEGFVPD---ILVLG 269 (439)
T ss_dssp TSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTCTTTTSSS-SGG-GGTTCCCS---EEEEC
T ss_pred hcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchh-hHH-HhcCCCCC---EEEEc
Confidence 45667777777788888765 555699999999999 9999999999976544421 111 11111122 23899
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
|.++ +|+|+||+++++++++.+.......++ .+++++.++.++|+.... +++++..++..+..++.+.+.+.+++.+
T Consensus 270 K~~~-~G~riG~~~~~~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 346 (439)
T 3dxv_A 270 KGLG-GGLPLSAVIAPAEILDCASAFAMQTLH-GNPISAAAGLAVLETIDR-DDLPAMAERKGRLLRDGLSELAKRHPLI 346 (439)
T ss_dssp GGGG-TTSCCEEEEEEHHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred chhc-CCcceEEEEECHHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 9999 799999999999999887765445566 899999999998874111 2223333333333344444333334555
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
...++.|. |+|+.+......... ...+..++++.|+++ ||.+.||..+ .+++||+++. +++++++++++|+
T Consensus 347 ~~~~~~g~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~ 419 (439)
T 3dxv_A 347 GDIRGRGL-ACGMELVCDRQSREP---ARAETAKLIYRAYQL-GLVVYYVGMN--GNVLEFTPPLTITETDIHKALDLLD 419 (439)
T ss_dssp EEEEEETT-EEEEEEEEETTTTEE---CHHHHHHHHHHHHHH-TEECEEESTT--SCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEEEEE-EEEEEEecCccccCC---CHHHHHHHHHHHHHC-CcEEeecCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 55555555 466666211000000 001356788888877 9999998643 4799998654 8999999999999
Q ss_pred HHHHhhC
Q 012095 460 KGLLTLR 466 (471)
Q Consensus 460 ~~l~~~~ 466 (471)
++++++.
T Consensus 420 ~~l~~~~ 426 (439)
T 3dxv_A 420 RAFSELS 426 (439)
T ss_dssp HHHHTGG
T ss_pred HHHHHHh
Confidence 9998764
No 137
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=2e-33 Score=288.37 Aligned_cols=357 Identities=16% Similarity=0.122 Sum_probs=251.8
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. |+.+++++.+++.+. .+|+...+..+++.++++++.+.++.. ..++|++|+|+++++.
T Consensus 62 ~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~ 139 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHF-THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEAVE 139 (453)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHC-SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhc-cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHHHH
Confidence 577899999884 55654 889999999998764 456656677888899999998877632 2579999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCC--------------EEEEecCCC--CCCCcCC--------HHHHHh
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADA--------------TPVILPTRI--SENFLLD--------PKVLES 223 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~--~~~~~ld--------~e~l~~ 223 (471)
.+++.+.. .++.|++.+++|+++...+...+. .+..+|... .+.++.+ ++.|++
T Consensus 140 ~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~ 219 (453)
T 4ffc_A 140 NAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIET 219 (453)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHH
Confidence 99977653 458999999999988766655432 344555431 1112233 466777
Q ss_pred hhccCCcEEEEcCCCCCcc--cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCC
Q 012095 224 KLTEKSRLLILCSPSNPTG--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS 301 (471)
Q Consensus 224 ~l~~~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 301 (471)
.+.++..++++++|.|++| .+.+++++++|.++|++| |++||+||+|.++.+.+.. ..+... +....+.|||
T Consensus 220 ~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~-~a~~~~----~~~pdi~t~s 293 (453)
T 4ffc_A 220 QIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN-GVVFIADEVQTGFARTGAW-FASEHE----GIVPDIVTMA 293 (453)
T ss_dssp HTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-STHHHH----TCCCSEEEEC
T ss_pred hcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecCccCCCccccc-chhhhc----CCCcchHhhh
Confidence 6666667788888888776 566888999999999999 9999999999987554421 111111 1122255799
Q ss_pred cccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 012095 302 KAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV 381 (471)
Q Consensus 302 K~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 381 (471)
|.++. |+|+||+++++++++.+.......+++.++++|.++.++|+.... ++++++.++..+..++.+.+.+.+++++
T Consensus 294 K~~~~-G~~~G~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 371 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRE-LDLPARARAIEASVTSRLSALAEEVDII 371 (453)
T ss_dssp GGGGT-TSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred hhhcC-CcCeEEEEECHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 99984 999999999999999887666667788999999999999874211 2334444444444555555555555555
Q ss_pred eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 382 KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 382 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
....+.|. |+|+.+... ..... ......++++.|+++ ||.+.|+..|+ +++|+++.. +++++++++++|+
T Consensus 372 ~~~~~~g~-~~~~~~~~~-~~~~~---~~~~~~~~~~~l~~~-Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~l~~l~ 443 (453)
T 4ffc_A 372 GEVRGRGA-MLAIEIVKP-GTLEP---DAALTKSIAAEALSQ-GVLILTCGTFG--NVIRLLPPLVIGDDLLDEGITALS 443 (453)
T ss_dssp EEEEEETT-EEEEEEBCT-TSCCB---CHHHHHHHHHHHHHT-TEECCEECTTS--CEEEECCCTTCCHHHHHHHHHHHH
T ss_pred EEEEeece-EEEEEEecC-cccCC---CHHHHHHHHHHHHhC-CCEEecCCCCC--CEEEEECCCCCCHHHHHHHHHHHH
Confidence 55544444 577776421 00000 001356788888876 99999987653 689998664 8999999999999
Q ss_pred HHHHhhCC
Q 012095 460 KGLLTLRP 467 (471)
Q Consensus 460 ~~l~~~~~ 467 (471)
++++++..
T Consensus 444 ~~l~~~~~ 451 (453)
T 4ffc_A 444 DIIRAKAS 451 (453)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99987653
No 138
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.8e-32 Score=279.39 Aligned_cols=340 Identities=12% Similarity=0.078 Sum_probs=240.1
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|.+ +++ .++.+++++.+++.+... |....+..+.+..+++.+.+.++ ..+++|++|+|+++++.
T Consensus 41 ~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggtea~~ 117 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSH-VMFGGITHAPAIELCRKLVAMTP--QPLECVFLADSGSVAVE 117 (429)
T ss_dssp TSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSC-CCCSSEECHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHH
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccc-ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHH
Confidence 4667899999884 454 478999999998876432 21111223455666666666666 36789999999999999
Q ss_pred HHHHHhc---C----CCCeEEEcCCCCCChHHHHHH-cC-------------CEEEEecCCC---CCCC-cCCHHHHHhh
Q 012095 170 QAVLAVC---S----PGDEVIIPAPFWVSYPEMARI-AD-------------ATPVILPTRI---SENF-LLDPKVLESK 224 (471)
Q Consensus 170 ~~~~~l~---~----~gd~Vlv~~p~y~~~~~~~~~-~G-------------~~~~~v~~~~---~~~~-~ld~e~l~~~ 224 (471)
.+++++. + |||.|++.+|+|+++...+.. .| ..+..++.+. ++.| .+|+++|+++
T Consensus 118 ~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 197 (429)
T 1s0a_A 118 VAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARL 197 (429)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHH
T ss_pred HHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHH
Confidence 9988653 2 699999999999987553322 11 1234444431 1234 4799999999
Q ss_pred hcc---CCcEEEEcCC--CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEe
Q 012095 225 LTE---KSRLLILCSP--SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVN 298 (471)
Q Consensus 225 l~~---~~~~i~i~~p--~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~ 298 (471)
+++ ++++ ++++| +||||. ..+++++++|.++|++| ++++|+||+|.++.+.+.. ..+.... ...+ +.
T Consensus 198 l~~~~~~~~~-vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~g~~g~~-~~~~~~~-~~~d---~~ 270 (429)
T 1s0a_A 198 MAAHRHEIAA-VIIEPIVQGAGGMRMYHPEWLKRIRKICDRE-GILLIADEIATGFGRTGKL-FACEHAE-IAPD---IL 270 (429)
T ss_dssp HHHHTTTEEE-EEECSSEECTTTCEEBCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGGT-CCCS---EE
T ss_pred HHhCCCCEEE-EEEeecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCcccchH-HHhhhcC-CCCC---EE
Confidence 873 4444 45555 689995 66789999999999999 9999999999876543321 1111111 1122 33
Q ss_pred cCCcccCccc-hhheeeEcCHHHHHHHHHHH-----hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHH
Q 012095 299 GFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-----SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLV 372 (471)
Q Consensus 299 S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~-----~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~ 372 (471)
||||.++ +| +|+||+++++++++.+.... ...+++.+++++.++.++|+.. .+ ++..++++++++++.
T Consensus 271 t~sK~l~-~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~---~~--~~~~~~~~~~~~~l~ 344 (429)
T 1s0a_A 271 CLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAIL---ES--GDWQQQVADIEVQLR 344 (429)
T ss_dssp EECGGGG-TSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHH---HT--CHHHHHHHHHHHHHH
T ss_pred Eeccccc-CCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHH---Hh--CCHHHHHHHHHHHHH
Confidence 7999998 78 99999999999988876521 2245667999999999988741 11 245567777888888
Q ss_pred HHhcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cC
Q 012095 373 KSFGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--AS 447 (471)
Q Consensus 373 ~~L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~ 447 (471)
+.|+++ +++....+.|. |+|++++... +..++.+.|+++ ||.+.|+ .+++||+++ .+
T Consensus 345 ~~L~~l~~~~~~~~~~~~g~-~~~~~~~~~~-----------~~~~l~~~l~~~-Gi~v~~~-----~~~iRis~~~~~t 406 (429)
T 1s0a_A 345 EQLAPARDAEMVADVRVLGA-IGVVETTHPV-----------NMAALQKFFVEQ-GVWIRPF-----GKLIYLMPPYIIL 406 (429)
T ss_dssp HHHGGGGGCTTEEEEEEETT-EEEEEESSCB-----------CHHHHHHHHHHT-TEECCCB-----TTEEEECCCTTCC
T ss_pred HHHHHHhcCCCEEEEEEeeE-EEEEEECCcc-----------cHHHHHHHHHHC-CCEEecc-----CCEEEEECCCCCC
Confidence 888775 56654555554 6888887531 577899988865 9999884 268999965 49
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q 012095 448 LTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~~~ 466 (471)
++++++++++|++++++++
T Consensus 407 ~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 407 PQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp HHHHHHHHHHHHHHTSSGG
T ss_pred HHHHHHHHHHHHHHHHhhh
Confidence 9999999999999876543
No 139
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=1e-32 Score=283.77 Aligned_cols=355 Identities=14% Similarity=0.048 Sum_probs=249.5
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||++.| ...++. ++.+++++.+++.+..+.|+...+..++++++++++.+.++ ...++|++|+|+++++.
T Consensus 48 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA~~ 125 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSESVD 125 (459)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHHHH
Confidence 57789999988 445554 78999999999887555666666778899999999988876 35679999999999999
Q ss_pred HHHHHhcC--------CCCeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCC--C-CCCcCC--------
Q 012095 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA-------------TPVILPTRI--S-ENFLLD-------- 217 (471)
Q Consensus 170 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~--~-~~~~ld-------- 217 (471)
.+++++++ ++|.|++.+|+|+++...+...+. .+..++... . +.+ +|
T Consensus 126 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~ 204 (459)
T 4a6r_A 126 TMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVA 204 (459)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHH
Confidence 99999875 469999999999998866655533 223333221 0 112 34
Q ss_pred HHHHHhhhcc---CCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLTE---KSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~~---~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
+++|++++.+ +..++++++| +|++|. +++++++++|.++|++| |++||+||+|.++...|... ....... ..
T Consensus 205 ~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~G~~~-~~~~~~~-~p 281 (459)
T 4a6r_A 205 ARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY-DVLLVADEVICGFGRTGEWF-GHQHFGF-QP 281 (459)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-HHHHHTC-CC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccc-hHhhcCC-CC
Confidence 7888888862 3334444455 555665 56999999999999999 99999999999875554311 1111111 11
Q ss_pred ceEEEecCCcccCccchhheeeEcCHHHHHHHH---HHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHH-HHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN---KIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV-KAFRERR 368 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~---~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~-~~~~~~r 368 (471)
. +.+|||.++.+|+|+||+++++++++.+. ......+++.+++++.++.++|+.... ++++++.+ +..+..+
T Consensus 282 d---i~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~~~~ 357 (459)
T 4a6r_A 282 D---LFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRD-EGIVQRVKDDIGPYMQ 357 (459)
T ss_dssp S---EEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHH-TCHHHHHHHTHHHHHH
T ss_pred C---eeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHH
Confidence 1 34689999744499999999999999987 333345667899999999999974211 34455555 5555666
Q ss_pred HHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--
Q 012095 369 DFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA-- 445 (471)
Q Consensus 369 ~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~-- 445 (471)
+.+.+.|.+++++....+.|.| +++.+...... ...+.. .....++++.|+++ ||.+.|+. +++||++.
T Consensus 358 ~~l~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-----~~iRi~~~~~ 429 (459)
T 4a6r_A 358 KRWRETFSRFEHVDDVRGVGMV-QAFTLVKNKAK-RELFPDFGEIGTLCRDIFFRN-NLIMRACG-----DHIVSAPPLV 429 (459)
T ss_dssp HHHHHHHTTCTTEEEEEEETTE-EEEEECSBTTT-TBCCSSTTHHHHHHHHHHHHT-TEECEEET-----TEEEECCCTT
T ss_pred HHHHHHHhcCCCeEEEEEEEEE-EEEEEecCccc-cccccchHHHHHHHHHHHHHC-CeEEecCC-----CEEEEECCCC
Confidence 6665667767667666666665 55666432100 000000 00156788888876 99999963 79999954
Q ss_pred cCHHHHHHHHHHHHHHHHhh
Q 012095 446 ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 446 ~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+++++++++++|+++++++
T Consensus 430 ~t~e~i~~~l~~l~~~l~~~ 449 (459)
T 4a6r_A 430 MTRAEVDEMLAVAERCLEEF 449 (459)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 49999999999999998765
No 140
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-33 Score=288.80 Aligned_cols=325 Identities=14% Similarity=0.148 Sum_probs=240.8
Q ss_pred CeEEcCCC-CCCCCChHHHHHHHHHH----HHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHH
Q 012095 96 SVIRLAAG-EPDFDTPVLIAEAGINA----IREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQ 170 (471)
Q Consensus 96 ~~i~l~~g-~~~~~~p~~v~~a~~~~----~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 170 (471)
++|+|+.| ++++++|+.+.++.... ...+...|+ ..|.+ +++++++++.+.+|. +++++++|+++++..
T Consensus 90 ~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt~al~~ 163 (464)
T 1ibj_A 90 LLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGMAALSA 163 (464)
T ss_dssp HHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHHHHHHH
T ss_pred eEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHHHHHHH
Confidence 47899997 88888887777666532 223446675 45666 899999999988884 377778888899988
Q ss_pred HHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCC
Q 012095 171 AVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 171 ~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~ 246 (471)
++. ++++||+|++++|+|.++... ++..|++++.++++ |++++++++++++++|++++|+||||.+++
T Consensus 164 ~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~NptG~v~~ 235 (464)
T 1ibj_A 164 VTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPRQQISD 235 (464)
T ss_dssp HHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTTCCCCC
T ss_pred HHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCCCEeec
Confidence 775 789999999999999998754 56789999999863 899999999989999999999999999998
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCc-cchhheeeEcC-HHHHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGP-KHFVAAC 324 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~~-~~~i~~l 324 (471)
+++|+++|++| |++||+||+|.... ...++ . .++++++.|+||.++. .|+|+||++++ +++++.+
T Consensus 236 ---l~~i~~la~~~-gi~livDea~~~g~----~~~~~-~----~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l 302 (464)
T 1ibj_A 236 ---IRKISEMAHAQ-GALVLVDNSIMSPV----LSRPL-E----LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEV 302 (464)
T ss_dssp ---HHHHHHHHHTT-TCEEEEECTTTCTT----TCCGG-G----TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHH
T ss_pred ---HHHHHHHHHHc-CCEEEEECCCcccc----cCChh-h----cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHH
Confidence 99999999999 99999999997521 11111 1 3577999999999863 48999999998 4888888
Q ss_pred HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH----------HHHhcCCCCCeeeCCCc---ceE
Q 012095 325 NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL----------VKSFGELEGVKMSEPQG---AFY 391 (471)
Q Consensus 325 ~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l----------~~~L~~~~g~~~~~p~~---g~~ 391 (471)
.........+.+++.|.++..+|+. ....+++..+......+++ .+.|.++||+++..++. |.+
T Consensus 303 ~~~~~~~g~~~~~~~~~a~~~al~~---~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~ 379 (464)
T 1ibj_A 303 YFLQNSEGSGLAPFDCWLCLRGIKT---MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSV 379 (464)
T ss_dssp HHHHHHTTCBCCHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSE
T ss_pred HHHHHhcCCCCCHHHHHHHHhchhh---HHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceE
Confidence 8776656667789999988888764 1222222222222222222 34555566777665542 334
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC------------CC----------CC-CCcEEEEeecCH
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD------------AF----------GD-DTCIRISYAASL 448 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~------------~f----------~~-~~~iRis~~~~~ 448 (471)
+++.+++. .....+.+.|. ..||.+.+|. .+ +. ++++|+|++.
T Consensus 380 ~~~~l~~~-----------~~~~~~~~~L~-~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~-- 445 (464)
T 1ibj_A 380 FSFITGSV-----------ALSKHLVETTK-YFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI-- 445 (464)
T ss_dssp EEEECSCH-----------HHHHHHHHHCS-SSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS--
T ss_pred EEEEECCH-----------HHHHHHHHhcC-cceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--
Confidence 67777421 02345777654 3589888885 11 22 5799999998
Q ss_pred HHHHHHHHHHHHHHHh
Q 012095 449 TTLQAAVERIKKGLLT 464 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~ 464 (471)
|++++++++|++++++
T Consensus 446 edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 446 EDVDDLISDLDIAFKT 461 (464)
T ss_dssp SCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999999999999875
No 141
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=100.00 E-value=5.6e-34 Score=283.17 Aligned_cols=325 Identities=12% Similarity=0.084 Sum_probs=241.1
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCCC---CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh-HHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYTP---NAGTLELRSAICHKLKEENGLSYTPDQILVSNGA-KQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~-~~a 167 (471)
.+++++.|.+ ++|+.+++++.+.+.+. ...|+. ..+..++.+.+.+.+++.+|.+ ++++|++|+|+ +++
T Consensus 3 ~~~~~~~g~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~a 79 (360)
T 1w23_A 3 QVFNFNAGPS--ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQ 79 (360)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred ceEeecCCCc--CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHH
Confidence 4678888865 66888999998876431 112222 3344556777777777778864 46799999999 999
Q ss_pred HHHHHHHhcCC---CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHh-hhccCCcEEEEcCCCCCccc
Q 012095 168 ILQAVLAVCSP---GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLES-KLTEKSRLLILCSPSNPTGS 243 (471)
Q Consensus 168 l~~~~~~l~~~---gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~-~l~~~~~~i~i~~p~NPtG~ 243 (471)
+..++..++.+ ||.|+++.++|.. ...++..| +++.+++++++++ +|++++++ ++++++|+|++++|+||||.
T Consensus 80 l~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~~-~d~~~l~~~~i~~~~k~v~~~~~~nptG~ 156 (360)
T 1w23_A 80 FTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANSY-QSIPDFSEFQLNENDAYLHITSNNTIYGT 156 (360)
T ss_dssp HHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGTS-CSCCCGGGCCCCTTEEEEEEESEETTTTE
T ss_pred HHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccCc-CCccchHhhccCCCCCEEEEeCCCCCcce
Confidence 99999999865 5677777777654 33467789 9999998753433 79999999 88888999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAA 323 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~ 323 (471)
+++ ++. ++| |++||+||+|..+.. ...+..+ .+++.|+||.+|++| +||+++++++++.
T Consensus 157 ~~~--~i~------~~~-~~~li~D~a~~~~~~----~~~~~~~------di~~~s~sK~~~~~G--~G~~~~~~~~~~~ 215 (360)
T 1w23_A 157 QYQ--NFP------EIN-HAPLIADMSSDILSR----PLKVNQF------GMIYAGAQKNLGPSG--VTVVIVKKDLLNT 215 (360)
T ss_dssp ECS--SCC------CCC-SSCEEEECTTTTTSS----CCCGGGC------SEEEEETTTTTSCTT--CEEEEEEHHHHCS
T ss_pred ecc--ccc------ccC-CceEEEechhhcCCC----CcCcccC------CEEEEEcccccCCCC--cEEEEEcHHHHhh
Confidence 987 232 378 999999999986431 1122211 388999999999666 9999999988776
Q ss_pred HHHHH------------hcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCC-eee-CC-
Q 012095 324 CNKIQ------------SQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMS-EP- 386 (471)
Q Consensus 324 l~~~~------------~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~-~~~-~p- 386 (471)
+.... .....+++...+.++.++++. ..+ ++++++++++++++++.+.|++++++ ... .|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 292 (360)
T 1w23_A 216 KVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDW---IKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKG 292 (360)
T ss_dssp CCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGG
T ss_pred cccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCch
Confidence 54321 111234567777777777764 122 68889999999999999999998655 543 23
Q ss_pred -CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 387 -QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 387 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
.+++++|+++++. .+..++.++|.+ .||.+.||..+ ++++|++++. +++++++++++|+++++
T Consensus 293 ~~~~~~~~~~~~~~-----------~~~~~~~~~l~~-~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 293 SRSLMNVTFNLRNE-----------ELNQQFLAKAKE-QGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFKE 358 (360)
T ss_dssp GBCSSEEEEECSSH-----------HHHHHHHHHHHH-TTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred hccCcEEEEEcCCC-----------ccHHHHHHHHHH-CCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHHh
Confidence 3566889988742 145678888765 59999998764 6899999995 88999999999999876
Q ss_pred h
Q 012095 464 T 464 (471)
Q Consensus 464 ~ 464 (471)
+
T Consensus 359 ~ 359 (360)
T 1w23_A 359 N 359 (360)
T ss_dssp H
T ss_pred h
Confidence 5
No 142
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=1e-32 Score=278.55 Aligned_cols=326 Identities=15% Similarity=0.192 Sum_probs=249.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++|+|+.|.++++ +.+.+++.+++..+ .|++..+..++++.+++++ |. +++++++|+++++..++++
T Consensus 30 ~~~id~~~~~~~~~--~~v~~a~~~~~~~~--~y~~~~~~~~l~~~la~~~----~~----~~~v~~~~Gt~a~~~~l~~ 97 (399)
T 2oga_A 30 VPFLDLKAAYEELR--AETDAAIARVLDSG--RYLLGPELEGFEAEFAAYC----ET----DHAVGVNSGMDALQLALRG 97 (399)
T ss_dssp BCSCCHHHHHHHTH--HHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHT----TS----SEEEEESCHHHHHHHHHHH
T ss_pred CcccccCcCCCCCC--HHHHHHHHHHHhcC--CCCCchhHHHHHHHHHHHH----CC----CeEEEecCHHHHHHHHHHH
Confidence 46889999988763 78899998888653 5766778889999999886 32 3677888889999999999
Q ss_pred h-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 175 V-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 175 l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+ +++||+|++++|+|+++...++..|++++.+++++ +++.+|++++++++++++++|+ |+||||.+.+ +++|
T Consensus 98 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i 170 (399)
T 2oga_A 98 LGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD---MDAL 170 (399)
T ss_dssp TTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHH
T ss_pred hCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC---HHHH
Confidence 9 89999999999999999999999999999999874 3577999999999988888776 5789999998 8999
Q ss_pred HHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEcC-HHHHHHHHHHHh
Q 012095 254 ARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~ 329 (471)
.++|+++ +++||+||+|..+. +++. .+..+ ..+++.|| ||.+|.+| |+||++++ +++++.+.....
T Consensus 171 ~~l~~~~-~~~li~Dea~~~g~~~~~~---~~~~~-----~di~~~S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~ 240 (399)
T 2oga_A 171 RELADRH-GLHIVEDAAQAHGARYRGR---RIGAG-----SSVAAFSFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRN 240 (399)
T ss_dssp HHHHHHH-TCEECEECTTCTTCEETTE---ETTCT-----TCEEEEECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHB
T ss_pred HHHHHHc-CCEEEEECcccccCccCCe---ecccc-----cCEEEEeCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHh
Confidence 9999999 99999999998653 3221 11111 13888898 79999779 99999986 889888877654
Q ss_pred cc------------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEec
Q 012095 330 QF------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDF 396 (471)
Q Consensus 330 ~~------------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~ 396 (471)
.. +...+.+.+.++.+.++. +++..++.+++++++.+.|.+++|+.+. .|.++.++|+.+
T Consensus 241 ~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-------~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~ 313 (399)
T 2oga_A 241 YGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-------LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLF 313 (399)
T ss_dssp TTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSE
T ss_pred cCccccccccccccCCCcCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEE
Confidence 21 224567777766666653 3344556667788899999988887764 355555555333
Q ss_pred CCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC-----------CC------------CCcEEEEeec--CHHHH
Q 012095 397 STYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-----------GD------------DTCIRISYAA--SLTTL 451 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f-----------~~------------~~~iRis~~~--~~e~i 451 (471)
+-.. .+..++.+.|.++ ||.+.++... +. .+++||++.. +++++
T Consensus 314 ~~~~----------~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi 382 (399)
T 2oga_A 314 TVRT----------ERRDELRSHLDAR-GIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQA 382 (399)
T ss_dssp EEEC----------SSHHHHHHHHHHT-TBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHH
T ss_pred EEEC----------CCHHHHHHHHHHC-CCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHH
Confidence 2110 1577899988765 9999885421 10 1579999885 89999
Q ss_pred HHHHHHHHHHHHhhCC
Q 012095 452 QAAVERIKKGLLTLRP 467 (471)
Q Consensus 452 ~~~~~~l~~~l~~~~~ 467 (471)
+++++.|++++++++.
T Consensus 383 ~~~~~~l~~~~~~l~~ 398 (399)
T 2oga_A 383 LRVIDAVREWAERVDQ 398 (399)
T ss_dssp HHHHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999987653
No 143
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=7.6e-33 Score=278.82 Aligned_cols=335 Identities=14% Similarity=0.119 Sum_probs=240.6
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|++.|. ++++ +|+.+.+++.+++..... ++. ....++++.+++.+.+.+| ..+++|++|+|+++++.
T Consensus 43 ~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~-~~~-~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~~a~~ 118 (395)
T 1vef_A 43 EGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMA-MPQ-TLPTPMRGEFYRTLTAILP--PELNRVFPVNSGTEANE 118 (395)
T ss_dssp TSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCC-CCT-TSCCHHHHHHHHHHHHTSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCC-Ccc-ccCCHHHHHHHHHHHHhcC--CCcCEEEEcCcHHHHHH
Confidence 466789999886 4555 688999999998875321 211 1123455666666666566 36789999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCC-hHHHHHHcCCEEEE---ecCCCCCC-C-cCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVS-YPEMARIADATPVI---LPTRISEN-F-LLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~-~~~~~~~~G~~~~~---v~~~~~~~-~-~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
.+++++. .+||.|++.+|+|++ +...+...|.+.+. +|+..+.. + ..|+++|++++++++++|+++.++|||
T Consensus 119 ~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 198 (395)
T 1vef_A 119 AALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEG 198 (395)
T ss_dssp HHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTT
T ss_pred HHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCC
Confidence 9998764 578999999999975 44566777775211 12111000 0 148999999998888888776668999
Q ss_pred ccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccchhheeeEcCHH
Q 012095 242 GSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH 319 (471)
Q Consensus 242 G~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~ 319 (471)
|.++ +++++++|.++|++| +++||+||+|.++.+.+... ....... ..++ ||||.++ +|+|+||++++++
T Consensus 199 G~~~~~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~---~d~~---s~sK~~~-~g~~~G~~~~~~~ 270 (395)
T 1vef_A 199 GVRPATPEFLRAAREITQEK-GALLILDEIQTGMGRTGKRFAFEHFGIV---PDIL---TLAKALG-GGVPLGVAVMREE 270 (395)
T ss_dssp TSEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCC---CSEE---EECGGGG-TTSSCEEEEEEHH
T ss_pred CccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCCchhHhhhcCCC---CCEE---EEccccc-CCCceEEEEehHH
Confidence 9765 788999999999999 99999999999754433211 1111221 2222 8899998 4999999999998
Q ss_pred HHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC--CeeeCCCcceEEeEecC
Q 012095 320 FVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG--VKMSEPQGAFYLFIDFS 397 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g--~~~~~p~~g~~~~~~~~ 397 (471)
+++.+.......+++++++.+.++.++|+. ..+ ....++++++++++.+.|++++. +... +..|+++|++++
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~a~~~al~~---~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~ 344 (395)
T 1vef_A 271 VARSMPKGGHGTTFGGNPLAMAAGVAAIRY---LER--TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELK 344 (395)
T ss_dssp HHHTSCTTSSCCSSTTCHHHHHHHHHHHHH---HHH--HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEES
T ss_pred HHhhhccCCcCCCcCCCHHHHHHHHHHHHH---HHh--CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEc
Confidence 887765422334566889999988888874 122 45677888899999999988732 1122 334566888886
Q ss_pred CccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHH
Q 012095 398 TYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGL 462 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l 462 (471)
. +..++.+.|++++||.+.|+. ++++|++++ .+++++++++++|++++
T Consensus 345 ~-------------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 345 E-------------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp S-------------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred C-------------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 3 356889988834499999963 679999876 38999999999999876
No 144
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=6.1e-33 Score=282.89 Aligned_cols=333 Identities=14% Similarity=0.104 Sum_probs=231.5
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCC----------HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGT----------LELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~----------~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.+.+.|..+.+. ++|+.+++++.+.+.. ...| |..++ .++|+.+++++ | +++++|++|+|+
T Consensus 17 ~~~~~Ld~~~~~-~~~~~v~~a~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~~g~ 87 (432)
T 3a9z_A 17 NRKVYMDYNATT-PLEPEVIQAVTEAMKE-AWGN-PSSSYVAGRKAKDIINTARASLAKMI----G--GKPQDIIFTSGG 87 (432)
T ss_dssp -CCEECBTTTCC-CCCHHHHHHHHHHHHH-CCSC-TTCSSHHHHHHHHHHHHHHHHHHHHH----T--CCGGGEEEESCH
T ss_pred CCcEEeeCCccC-CCCHHHHHHHHHHHHH-hcCC-CccCcHHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEeCCh
Confidence 357889988877 6688899999988865 3344 22222 46666666664 5 367899999999
Q ss_pred HHHHHHHHHHhc--------CCCCeEEEcCCCCCCh-----------------HHHHHHcCCEEEEecCCCCCCCcCCHH
Q 012095 165 KQSILQAVLAVC--------SPGDEVIIPAPFWVSY-----------------PEMARIADATPVILPTRISENFLLDPK 219 (471)
Q Consensus 165 ~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~-----------------~~~~~~~G~~~~~v~~~~~~~~~ld~e 219 (471)
++++..++++++ ++||+|++++|+|..| ...++..|++++.++++.+ ++.+|++
T Consensus 88 t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~ 166 (432)
T 3a9z_A 88 TESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQVEVE 166 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSSCCHH
T ss_pred HHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCCcCHH
Confidence 999999999886 5899999999999876 3444567999999998742 4568999
Q ss_pred HHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC----------eEEEEccCCCccccCCCCccccccCCC
Q 012095 220 VLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR----------LLVLSDEIYEHIIYAPATHTSFASLPG 289 (471)
Q Consensus 220 ~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~----------~~ii~De~y~~~~~~~~~~~~~~~~~~ 289 (471)
+|++++++++++|++++|+||||.+++ +++|.++|+++ + ++||+||+|..+. ....+...
T Consensus 167 ~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~-~~~~~~~~~~~~~livDea~~~~~----~~~~~~~~-- 236 (432)
T 3a9z_A 167 DILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKAL-NQIRAASGLPRVLVHTDAAQALGK----RRVDVEDL-- 236 (432)
T ss_dssp HHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHH-HHHHHHHTCCCCEEEEECTTTTTT----SCCCHHHH--
T ss_pred HHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhc-CcccccccCCceEEEEEchhhhCC----cccChhhc--
Confidence 999999988999999999999999999 67889999999 8 9999999997632 11222222
Q ss_pred CCCceEEEecCCcccCccchhheeeEcCHHH-HHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTGWRLGYIAGPKHF-VAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~-i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
+..+++.||||.+| +|+||+++++++ +..+... ......+++.+.+.++.++|+. .++++++++
T Consensus 237 --~~d~~~~s~~K~~g---~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~---~~~~~~~~~ 308 (432)
T 3a9z_A 237 --GVDFLTIVGHKFYG---PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADL---VSENCETYE 308 (432)
T ss_dssp --CCSEEEEEGGGTTC---CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred --CCCEEEEehhHhcC---CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHH---HHhhHHHHH
Confidence 22366899999875 579999998765 3222211 1122345678888888778874 355788899
Q ss_pred HHHHHHHHHHHHHhcCCCCCeee--CC-----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 362 KAFRERRDFLVKSFGELEGVKMS--EP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~--~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
++++++++++.+.|++++|+.+. .| ..+..+++.+++. + .+..++.+.+ .+|.+.+|..+
T Consensus 309 ~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~l---~~i~~~~G~~~ 375 (432)
T 3a9z_A 309 AHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGS-Q---------LRGYMVLAQC---QTLLASVGASC 375 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECST-T---------CCHHHHHHHC---SSEECBSSCGG
T ss_pred HHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCC-C---------CcHHHHHHHh---cCeEEeccccc
Confidence 99999999999999886565432 33 1232355556531 0 1455666654 27777776543
Q ss_pred ---------------CC-----CCcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 435 ---------------GD-----DTCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 435 ---------------~~-----~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
|. .+++||+++. +++++++++++|++++++++.+
T Consensus 376 ~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~~ 431 (432)
T 3a9z_A 376 HSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEGP 431 (432)
T ss_dssp GGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 22 2789999997 8999999999999999887654
No 145
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=2.9e-32 Score=279.74 Aligned_cols=354 Identities=13% Similarity=0.085 Sum_probs=247.1
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||++.|. ..++. |+.+++++.+++.+..+ .+..+..+++.++++++.+.++. ..+ |++|+|+++++.
T Consensus 47 ~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~--~~~-v~~~~ggseA~~ 121 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGG--EYV-IFFSNSGSEANE 121 (452)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTS--CEE-EEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCC--Cce-EEEeCchHHHHH
Confidence 577899999884 34443 78999999999876433 34456678888888888888774 334 999999999999
Q ss_pred HHHHHhc-----C---CCCeEEEcCCCCCChHHHHHHcCCE-------------EEEecCCCCCCCcC-C---------H
Q 012095 170 QAVLAVC-----S---PGDEVIIPAPFWVSYPEMARIADAT-------------PVILPTRISENFLL-D---------P 218 (471)
Q Consensus 170 ~~~~~l~-----~---~gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~~~~~~~~~l-d---------~ 218 (471)
.+++.++ . ++|.|++.+|+|+++...+...+.. ...++....-.+.. | +
T Consensus 122 ~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (452)
T 3n5m_A 122 TAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECV 201 (452)
T ss_dssp HHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHH
Confidence 9999887 5 7899999999999887666555432 23333211100001 2 8
Q ss_pred HHHHhhhc----cCCcEEEEcCC-CCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 219 KVLESKLT----EKSRLLILCSP-SNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 219 e~l~~~l~----~~~~~i~i~~p-~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
++|+++++ +++++|+++.+ +| ||.++ +++++++|.++|++| |++||+||+|.++.+.|.. ...... +
T Consensus 202 ~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~-~~~~~~----~ 274 (452)
T 3n5m_A 202 KEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH-GALLISDEVICGFGRTGKA-FGFMNY----D 274 (452)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGT----T
T ss_pred HHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc-CCEEEEecchhCCCccccc-chhhhc----C
Confidence 99999887 45677777777 89 99766 888899999999999 9999999999987554431 111111 1
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHH------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNK------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~ 365 (471)
....+.+|||.++ .| +|+||+++++++++.+.. .....+++.+++++.++.++|+.... ++.+++.++..+
T Consensus 275 ~~~di~t~sK~l~-~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~ 352 (452)
T 3n5m_A 275 VKPDIITMAKGIT-SAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIEN-ENLIERSAQMGS 352 (452)
T ss_dssp CCCSEEEECGGGG-TTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHHH
T ss_pred CCCCEEeeccccc-CCCcceEEEEECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHh-ccHHHHHHHHHH
Confidence 1122447999998 49 999999999999988743 11335677899999999999874211 234555555555
Q ss_pred HHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC--CCcEEEE
Q 012095 366 ERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD--DTCIRIS 443 (471)
Q Consensus 366 ~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~--~~~iRis 443 (471)
..++.+.+.+.+++++....+.|.| +++.+....... ..+ ......++++.|+++ ||.+.|+..|.. ++++||+
T Consensus 353 ~l~~~L~~~~~~~~~~~~~~~~g~~-~~i~~~~~~~~~-~~~-~~~~~~~~~~~l~~~-Gv~~~~~~~~~~~~~~~iRi~ 428 (452)
T 3n5m_A 353 LLLEQLKEEIGEHPLVGDIRGKGLL-VGIELVNDKETK-EPI-DNDKIASVVNACKEK-GLIIGRNGMTTAGYNNILTLA 428 (452)
T ss_dssp HHHHHHHHHHTTCTTEEEEEESSSC-EEEEEEEETTTT-EEC-CHHHHHHHHHHHHHT-TEECEECTTSSTTCCCEEEEC
T ss_pred HHHHHHHHHHhcCCCeEEEEEEEEE-EEEEEecCCccc-CCC-CHHHHHHHHHHHHHC-CcEEeecCcccCCCCCEEEEE
Confidence 5556666555666666666666665 555553210000 000 000124688888876 999999986642 5799997
Q ss_pred ee--cCHHHHHHHHHHHHHHHHh
Q 012095 444 YA--ASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 444 ~~--~~~e~i~~~~~~l~~~l~~ 464 (471)
++ .+++++++++++|++++++
T Consensus 429 ~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 429 PPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Confidence 55 4999999999999999864
No 146
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=100.00 E-value=3.7e-33 Score=277.29 Aligned_cols=328 Identities=13% Similarity=0.077 Sum_probs=237.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
...+.+..|++++++++.+.+++.+.+ +...|++..+..+|++.+++++ |. +..++++|+++++..++++
T Consensus 13 ~~~~~~~~~~~~~g~~p~v~~ai~~~~--~~~~~~~~~~~~~l~~~la~~~----~~----~~~i~~~~g~~a~~~a~~~ 82 (359)
T 3pj0_A 13 TPYKLGGNGPRNVGVLTEALQNIDDNL--ESDIYGNGAVIEDFETKIAKIL----GK----QSAVFFPSGTMAQQIALRI 82 (359)
T ss_dssp CSEESSSSSCCBHHHHHHHTTTSCTTC--BCCBTTBSHHHHHHHHHHHHHH----TC----SEEEEESCHHHHHHHHHHH
T ss_pred cchhhcCCCccccCCCHHHHHHHHhhc--ccCcccCCHHHHHHHHHHHHHh----CC----CcEEEeCCHHHHHHHHHHH
Confidence 346777788888877888988888743 2356777778889999988886 32 2335557888999999999
Q ss_pred hcCCCCe--EEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc-ccCCCHH
Q 012095 175 VCSPGDE--VIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKN 248 (471)
Q Consensus 175 l~~~gd~--Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt-G~~~~~~ 248 (471)
++.+||. |+++.++|..+. ......|++++.++. +++.+|+++++++ .+++++|++++||||| |.+++.+
T Consensus 83 ~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~ 158 (359)
T 3pj0_A 83 WADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFE 158 (359)
T ss_dssp HHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHH
T ss_pred HHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHH
Confidence 9989887 555555543221 223567999999986 3467999999998 7789999999999998 7999999
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCcccc--CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIY--APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK 326 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~ 326 (471)
++++|+++|++| +++||+|++|..+.. .+.. ...+.. ...+++.||||.++.++ . ||+++++++++.+..
T Consensus 159 ~l~~l~~~~~~~-~~~li~D~a~~~~~~~~~~~~---~~~~~~--~~d~~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~ 230 (359)
T 3pj0_A 159 ELEKISEYCHEQ-GISLHLDGARLWEITPFYQKS---AEEICA--LFDSVYVSFYKGIGGIA-G-AILAGNDDFVQEAKI 230 (359)
T ss_dssp HHHHHHHHHHHH-TCEEEEEETTCGGGHHHHTCC---HHHHHT--TCSEEEEESSSTTCCSS-C-EEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEECcchhcchhhhCCC---HHHhhc--cCCEEEEeccccCCCcc-e-EEEECCHHHHHHHHH
Confidence 999999999999 999999999875431 1211 111111 12255679999987553 2 888999999999987
Q ss_pred HHhcccCCC--ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCCcceEEeEecCCccCCc
Q 012095 327 IQSQFTSGA--SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQGAFYLFIDFSTYYGSE 403 (471)
Q Consensus 327 ~~~~~~~~~--~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~~g~~~~~~~~~~~~~~ 403 (471)
.+.....+. ....+.++..+++. +. +..+++.++++++.+.|++++|+++. .|.+++|+|++++....
T Consensus 231 ~~~~~~~~~~~~~~~~~a~~~~l~~------~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 301 (359)
T 3pj0_A 231 WKRRYGGDLISLYPYILSADYYFEK------RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSAD-- 301 (359)
T ss_dssp HHHHTTCCCSCCHHHHHHHHHHHHH------HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHH--
T ss_pred HHHHhCCCcchhHHHHHHHHHHHHH------HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccc--
Confidence 655443333 23333333444442 22 33445788889999999999899885 56667778888864210
Q ss_pred ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCC--CcEEEEee-----cCHHHHHHHHHHHHHH
Q 012095 404 AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDD--TCIRISYA-----ASLTTLQAAVERIKKG 461 (471)
Q Consensus 404 ~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~--~~iRis~~-----~~~e~i~~~~~~l~~~ 461 (471)
.+..++.+.|.++ ||.+.||..|+.+ +++|+++. .+.+++++++++|.++
T Consensus 302 -------~~~~~l~~~l~~~-GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 302 -------EIGAILTKIQDET-GVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp -------HHHHHHHHHHHHH-CEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred -------hhHHHHHHHHHhc-CcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 1356777777665 9999999877643 58999887 3789999999999875
No 147
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=8.8e-33 Score=276.79 Aligned_cols=330 Identities=13% Similarity=0.096 Sum_probs=241.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
+.+.|..| +.++++.+.+++.+... ..|.|. ....++++.++++++...| +++++|++|+|+++++..+++
T Consensus 5 ~~~~~~p~--p~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~al~~~~~ 77 (385)
T 2bkw_A 5 VDTLLIPG--PIILSGAVQKALDVPSL---GHTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLGWDIFAS 77 (385)
T ss_dssp CCEECSSS--SCCCCHHHHHTTSCCCC---CTTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHHHHHHHH
T ss_pred cceeecCC--CcCchHHHHHHHhcccc---ccCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHHHHHHHH
Confidence 34556655 33456777777654321 123232 1345667777777654333 356899999999999999999
Q ss_pred Hhc---CCCCeEEEc-CCCCCChH-HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCH
Q 012095 174 AVC---SPGDEVIIP-APFWVSYP-EMARIADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPK 247 (471)
Q Consensus 174 ~l~---~~gd~Vlv~-~p~y~~~~-~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~ 247 (471)
+++ ++||+|+++ .|+|..+. ..++..|++++.++++ +.++.+|+++|++++++ ++++|++++|+||||.+++
T Consensus 78 ~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~- 155 (385)
T 2bkw_A 78 NFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSD- 155 (385)
T ss_dssp HHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC-
T ss_pred HHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcC-
Confidence 998 899999887 55666653 6778899999999982 23567899999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHhCC-CeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHH-HH
Q 012095 248 NLLDEIARIVAKHP-RLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVA-AC 324 (471)
Q Consensus 248 ~~l~~i~~l~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~-~l 324 (471)
+++|.++|++|+ +++||+||+|.... .... +.. .+..+++.|+||.+ |++| +||+++++++++ .+
T Consensus 156 --l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~---~~~-~~~d~~~~s~~K~~~~~~G--~G~~~~~~~~~~~~l 223 (385)
T 2bkw_A 156 --LKAISQAIKQTSPETFFVVDAVCSIGC----EEFE---FDE-WGVDFALTASQKAIGAPAG--LSISLCSSRFMDYAL 223 (385)
T ss_dssp --HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCC---TTT-TTCSEEEEESSSTTCCCSC--EEEEEECHHHHHHHT
T ss_pred --HHHHHHHHHhhCCCCEEEEECccccCC----cccc---ccc-cCceEEEecCccccccCCc--ceEEEEcHHHHHHHH
Confidence 889999999973 79999999997421 1111 211 34568999999966 4567 499999998877 54
Q ss_pred H----------------------HHHhc---ccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHHHHHHHHHh-cC
Q 012095 325 N----------------------KIQSQ---FTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRERRDFLVKSF-GE 377 (471)
Q Consensus 325 ~----------------------~~~~~---~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~r~~l~~~L-~~ 377 (471)
. ..... ...+++...+.++.++|+. ..++ +++.+++++++++++.+.| ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~l~~~L~~~ 300 (385)
T 2bkw_A 224 NDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE---ILEEGLHKRWDLHREMSDWFKDSLVNG 300 (385)
T ss_dssp CHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 11110 0134677777777777764 2333 7788899999999999999 88
Q ss_pred CCCCeeeCCC-----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-CCCcEEEE-ee-----
Q 012095 378 LEGVKMSEPQ-----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-DDTCIRIS-YA----- 445 (471)
Q Consensus 378 ~~g~~~~~p~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-~~~~iRis-~~----- 445 (471)
+ |+++..+. .+.++|+.++ +..++.+.|.+ +||.+.+|..+. .++++|++ ++
T Consensus 301 ~-g~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~-~gi~v~~g~~~~~~~~~iRis~~~~~~~~ 364 (385)
T 2bkw_A 301 L-QLTSVSRYPSNMSAHGLTAVYVA--------------DPPDVIAFLKS-HGVVIAGGIHKDIGPKYIRIGHMGVTACN 364 (385)
T ss_dssp T-CCEESSCSSSTTBCSSCEEEECS--------------CHHHHHHHHHH-TTEECBCCCCTTTGGGEEEECCCGGGTSS
T ss_pred c-CceecccCcccccCCceEEEecC--------------CHHHHHHHHHH-CCeEEeCCCCcccCCCEEEEEcccccccc
Confidence 8 88877532 4667888875 35678888876 599999998654 35799999 76
Q ss_pred cCHHHHHHHHHHHHHHHHhh
Q 012095 446 ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 446 ~~~e~i~~~~~~l~~~l~~~ 465 (471)
.+++++++++++|+++++++
T Consensus 365 ~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 365 KNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp TTCTHHHHHHHHHHHHTTC-
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 38899999999999987654
No 148
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=100.00 E-value=1.1e-32 Score=273.70 Aligned_cols=299 Identities=15% Similarity=0.167 Sum_probs=217.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCC--eEEEcCCCCCChHH---HHHHc
Q 012095 125 FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGD--EVIIPAPFWVSYPE---MARIA 199 (471)
Q Consensus 125 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd--~Vlv~~p~y~~~~~---~~~~~ 199 (471)
...|++..+..+|++++++++. . +..++++|+++++..++++++.+|| .|+++.++|..+.. .....
T Consensus 40 ~~~y~~~~~~~~l~~~la~~~~----~----~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~ 111 (357)
T 3lws_A 40 SDQYGTGAIIEPFEQKFADVLG----M----DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELH 111 (357)
T ss_dssp CEETTEETTHHHHHHHHHHHHT----C----SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHS
T ss_pred cccccCChHHHHHHHHHHHHhC----C----CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhcc
Confidence 3568777888999999999863 2 3345557778899999999999988 67777666543322 45677
Q ss_pred CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc--cc
Q 012095 200 DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI--IY 276 (471)
Q Consensus 200 G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~--~~ 276 (471)
|++++.++. +++.+|+++++++. ++++|++++||||| |.+++.+++++|+++|++| |++||+||+|... .+
T Consensus 112 g~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~ 185 (357)
T 3lws_A 112 PIETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER-GIRLHLDGARLFEMLPY 185 (357)
T ss_dssp SCEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHH
T ss_pred CcEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc-CCEEEEECchhhhhhhh
Confidence 999998884 33569999999984 48999999999998 9999999999999999999 9999999998621 11
Q ss_pred CCCCccccccCCCCCCceEEEecCCccc-CccchhheeeEcCHHHHHHHHHHHhcccCCC--ChHHHHHHHHHHhccCCC
Q 012095 277 APATHTSFASLPGMWERTLTVNGFSKAF-AMTGWRLGYIAGPKHFVAACNKIQSQFTSGA--SSISQKAGVAALGLGYAG 353 (471)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~--~~~~q~aa~~~L~~~~~~ 353 (471)
.+.....+. ...+ +++.||||.+ ++.| ||+++++++++.+.+.+.....+. ....+.++..+|+.
T Consensus 186 ~~~~~~~~~---~~~d--~~~~s~sK~~~~~~g---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 253 (357)
T 3lws_A 186 YEKTAAEIA---GLFD--SIYISFYKGLGGIAG---AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL---- 253 (357)
T ss_dssp HTCCHHHHH---TTSS--EEEEESSSTTCCSSC---EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----
T ss_pred cCCChHHHH---hcCC--EEEEeccccCCCCce---EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH----
Confidence 122111111 1123 4478999999 5444 999999999999987765444333 33344444455542
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCCee-eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC
Q 012095 354 GEVVSKMVKAFRERRDFLVKSFGELEGVKM-SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD 432 (471)
Q Consensus 354 ~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~ 432 (471)
+.+. .+++.++++++.+.|++++|+++ ..|.+++|+|++++.... .+..++.+.|.++ ||.+.||.
T Consensus 254 --~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~-Gi~v~~g~ 320 (357)
T 3lws_A 254 --RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---------DISPKLEQVQEET-GLGFVGYL 320 (357)
T ss_dssp --HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---------HHHHHHHHHHHHH-CEESCSCC
T ss_pred --HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---------HHHHHHHHHHHhc-CeEEeccc
Confidence 3333 33467788899999999989988 356777889999874200 0256777777665 99999997
Q ss_pred CCCCC-CcEEEEee-----cCHHHHHHHHHHHHHHH
Q 012095 433 AFGDD-TCIRISYA-----ASLTTLQAAVERIKKGL 462 (471)
Q Consensus 433 ~f~~~-~~iRis~~-----~~~e~i~~~~~~l~~~l 462 (471)
.|... .++|++++ .+.+++++++++|.+++
T Consensus 321 ~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 321 VDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp EECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred ccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 66532 38999987 37899999999998765
No 149
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=100.00 E-value=6.4e-33 Score=276.09 Aligned_cols=323 Identities=11% Similarity=0.083 Sum_probs=238.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC---------CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-c-EEEeCCh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG---------FTRYTPNAGTLELRSAICHKLKEENGLSYTPD-Q-ILVSNGA 164 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~-~-i~it~G~ 164 (471)
.++.+..|. .++|+.+++++.+++.+. ..+|+ .+..++++.+.+.+++.+|. .++ + +++|+|+
T Consensus 4 ~~~l~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~t~g~ 77 (362)
T 2c0r_A 4 RAYNFNAGP--AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFIQGGA 77 (362)
T ss_dssp CCEECCSSS--CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEESSHH
T ss_pred ceeeccCCC--CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEECCCc
Confidence 356677763 567889999998876431 12222 23466888999999988885 343 6 4678999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCCC-h-HHHHHHcCCEEEEecCCCC--CCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 165 KQSILQAVLAVCSPGDEVIIPAPFWVS-Y-PEMARIADATPVILPTRIS--ENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 165 ~~al~~~~~~l~~~gd~Vlv~~p~y~~-~-~~~~~~~G~~~~~v~~~~~--~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
++++..++.++++|||+|+++++.+.+ + ...++..| +++.++++.+ .++.+|.++++ +++++|+|++++|+||
T Consensus 78 t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~n~ 154 (362)
T 2c0r_A 78 STQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNETI 154 (362)
T ss_dssp HHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEETT
T ss_pred hHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCcCc
Confidence 999999999999999999988765433 2 35677889 9999998632 23335666654 6778999999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHH
Q 012095 241 TGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHF 320 (471)
Q Consensus 241 tG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~ 320 (471)
||.+++ ++++| + ++++|+|++|..+.. ... +. +..+++.|+||.+|++| +||+++++++
T Consensus 155 tG~~~~--~l~~i------~-~~~vivD~a~~~~~~----~~~---~~---~~d~~~~s~~K~~g~~G--~G~l~~~~~~ 213 (362)
T 2c0r_A 155 EGAQFK--AFPDT------G-SVPLIGDMSSDILSR----PFD---LN---QFGLVYAGAQKNLGPSG--VTVVIVREDL 213 (362)
T ss_dssp TTEECS--SCCCC------T-TSCEEEECTTTTTSS----CCC---GG---GCSEEEEETTTTTCCSS--CEEEEEEGGG
T ss_pred cceecc--ccccc------C-CCEEEEEChhhccCC----ccc---hh---HCcEEEEeccccccCcC--cEEEEEcHHH
Confidence 999754 25554 7 899999999986421 111 21 11478889999999888 9999999988
Q ss_pred HHHHHHH------------HhcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCC-eeeC
Q 012095 321 VAACNKI------------QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMSE 385 (471)
Q Consensus 321 i~~l~~~------------~~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~-~~~~ 385 (471)
++.+... ......+++.+.|.++.++|+. ..+ .+++++++++++++++.+.|++++++ .+..
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 290 (362)
T 2c0r_A 214 VAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKW---IEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCV 290 (362)
T ss_dssp SSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESS
T ss_pred HhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCC
Confidence 7655421 1123456888899999988874 233 68899999999999999999998436 6532
Q ss_pred C---CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 386 P---QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 386 p---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
+ .++.++++.++... +..++++.|.++ ||.+.+|..| .+++|+|++. ++++++++++.|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~-gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~~ 356 (362)
T 2c0r_A 291 DVDSRSDMNITFRLASEE-----------LEKEFVKASEQE-GFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFMEH 356 (362)
T ss_dssp CGGGBCSSEEEEECSCHH-----------HHHHHHHHHHHT-TEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ChHHcCCcEEEEEcCCcc-----------hHHHHHHHHHHC-CCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 2 23455788876421 567888887655 9999998766 4689999986 88999999999999
Q ss_pred HHHhh
Q 012095 461 GLLTL 465 (471)
Q Consensus 461 ~l~~~ 465 (471)
++++.
T Consensus 357 ~~~~~ 361 (362)
T 2c0r_A 357 FKRSR 361 (362)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 88764
No 150
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=3e-32 Score=279.53 Aligned_cols=354 Identities=14% Similarity=0.124 Sum_probs=243.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+. .+|+...+..+++.++++++.+.++.. ..++|++|+|+++++.
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA~~ 136 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVR-GDKRSALFNSGSEAVE 136 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCC-SSEEEEEESSHHHHHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcC-CCCEEEEeCcHHHHHH
Confidence 577899999884 55555 789999999998664 456666677888999999998877632 3579999999999999
Q ss_pred HHHHHhcC-C-CCeEEEcCCCCCChHHHHHHcCC--------------EEEEecCCCC--CCC-cC--------CHHHHH
Q 012095 170 QAVLAVCS-P-GDEVIIPAPFWVSYPEMARIADA--------------TPVILPTRIS--ENF-LL--------DPKVLE 222 (471)
Q Consensus 170 ~~~~~l~~-~-gd~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~~--~~~-~l--------d~e~l~ 222 (471)
.+++.+.. + ++.|++.+++|+++...+...+. .+..+|.... +.+ ++ +++.++
T Consensus 137 ~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (451)
T 3oks_A 137 NAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAI 216 (451)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHH
Confidence 99987654 3 48899999999988766655432 3455554310 000 01 244444
Q ss_pred hhh----ccCCcEEEEcCCCCCcc--cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEE
Q 012095 223 SKL----TEKSRLLILCSPSNPTG--SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLT 296 (471)
Q Consensus 223 ~~l----~~~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~ 296 (471)
+.+ .++..++++++|.|++| ...+++++++|.++|++| |++||+||+|.++.+.+.. ..+..... ...
T Consensus 217 ~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~-~~~~~~~~----~pd 290 (451)
T 3oks_A 217 TVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN-DVVFIADEVQTGFARTGAM-FACEHEGI----DPD 290 (451)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGTC----CCS
T ss_pred HHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCCccccc-hhhhhcCC----CCC
Confidence 444 33455677777866655 455788899999999999 9999999999987554431 11111111 111
Q ss_pred EecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 297 VNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 297 ~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
+.||||.++ .|||+||+++++++++.+.......+++.++++|.++.++|+.... ++++++.++..+..++.+.+.+.
T Consensus 291 i~t~sK~l~-~G~~iG~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~ 368 (451)
T 3oks_A 291 LIVTAKGIA-GGLPLSAVTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIES-EGLVARAQQIEKIMKDRLGRLQA 368 (451)
T ss_dssp EEEECGGGG-TTSSCEEEEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhh-CCcceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHh
Confidence 338999998 5999999999999999887666667788999999999999874110 23344444444444444554444
Q ss_pred CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHH
Q 012095 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAA 454 (471)
Q Consensus 377 ~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~ 454 (471)
+.+.+....+.|. ++|+.+... ..... ......++++.|+++ ||.+.|+..|+ +++|++++. ++++++++
T Consensus 369 ~~~~~~~~~~~G~-~~~~~~~~~-~~~~~---~~~~~~~~~~~l~~~-Gv~v~~~~~~~--~~iRi~~~~~~t~e~i~~~ 440 (451)
T 3oks_A 369 EDDRIGDVRGRGA-MIAMELVKA-GTTEP---DADLTKALCAGAHAA-GVIVLSCGTYG--NVVRFLPPLSIGDDLLNEG 440 (451)
T ss_dssp HCTTEEEEEEETT-EEEEEEBST-TSCCB---CHHHHHHHHHHHHHT-TEECEEECTTS--CEEEECCCTTCCHHHHHHH
T ss_pred hCCCeEEEEEeeE-EEEEEEecC-ccCCC---CHHHHHHHHHHHHhC-CcEEecCCCCC--CEEEEECCCCCCHHHHHHH
Confidence 4555555544555 566666321 00000 001356788888876 99999987653 689998664 89999999
Q ss_pred HHHHHHHHHh
Q 012095 455 VERIKKGLLT 464 (471)
Q Consensus 455 ~~~l~~~l~~ 464 (471)
+++|++++++
T Consensus 441 l~~l~~~l~~ 450 (451)
T 3oks_A 441 LDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999999864
No 151
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=100.00 E-value=1.4e-30 Score=264.43 Aligned_cols=330 Identities=18% Similarity=0.245 Sum_probs=244.1
Q ss_pred CCCCCCCCC-hHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cC
Q 012095 101 AAGEPDFDT-PVLIAEAGINAIREGFTR-YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CS 177 (471)
Q Consensus 101 ~~g~~~~~~-p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~ 177 (471)
+.|.|++++ |+.+++++.+++..+... |++..|..++++.+++.+.+.+|.+ ++++++|+++++..++.++ ++
T Consensus 5 ~~g~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~----~~i~~~~gt~al~~~~~~~~~~ 80 (418)
T 2c81_A 5 FDHWPEWPQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGVP----YCVPTTSGSTALMLALEALGIG 80 (418)
T ss_dssp ---CCCSSCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCC
Confidence 456777776 789999999998775544 8888888777888888888777743 5666777789999999999 89
Q ss_pred CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHH
Q 012095 178 PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIV 257 (471)
Q Consensus 178 ~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~ 257 (471)
+||+|+++.|+|.++...++..|++++.++++. +++.+|++++++++++++++|+++ ||||...+ +++|.++|
T Consensus 81 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~---~~~i~~~~ 153 (418)
T 2c81_A 81 EGDEVIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIPV---HLFGSMAN---MDEINEIA 153 (418)
T ss_dssp TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCC---HHHHHHHH
T ss_pred CcCEEEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEEe---CCcCCccc---HHHHHHHH
Confidence 999999999999999999999999999999864 357899999999998888888764 58999877 89999999
Q ss_pred HhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEcC-HHHHHHHHHHHhccc-
Q 012095 258 AKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT- 332 (471)
Q Consensus 258 ~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~- 332 (471)
++| +++||+||+|..+. +++. .+..+. .+.+.|| ||.++. | |+||++++ +++++.+........
T Consensus 154 ~~~-~~~li~D~a~~~~~~~~~~---~~~~~~-----~~~~~s~s~~K~~~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~ 222 (418)
T 2c81_A 154 QEH-NLFVIEDCAQSHGSVWNNQ---RAGTIG-----DIGAFSCQQGKVLTA-G-EGGIIVTKNPRLFELIQQLRADSRV 222 (418)
T ss_dssp HHT-TCEEEEECTTCTTCEETTE---ETTSSS-----SEEEEECCTTSSSCS-S-SCEEEEESCHHHHHHHHHHHBTTEE
T ss_pred HHC-CCEEEEECcccccCccCCE---eccccc-----ceEEEeccCCcccCC-C-CeEEEEECCHHHHHHHHHHHHhCcc
Confidence 999 99999999999875 4432 111111 2778888 999985 8 99999994 788888876543311
Q ss_pred -----------CC--------------CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CC
Q 012095 333 -----------SG--------------ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EP 386 (471)
Q Consensus 333 -----------~~--------------~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p 386 (471)
+. .+. .+.+ .. +.. .+++++..++.+++++++.+.|.+++|+++. .+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~aa-~~-~~~----l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 295 (418)
T 2c81_A 223 YCDDSSELMHGDMQLVKKGDIQGSNYCLSE-FQSA-IL-LDQ----LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRP 295 (418)
T ss_dssp ECSCGGGCCTTCBSEEECCSSCCCBCCCCH-HHHH-HH-HHH----HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCC
T ss_pred ccccccccccchhhccccccccCcCCCcCH-HHHH-HH-HHH----HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCC
Confidence 10 111 1111 11 111 2335667777778889999999998898886 45
Q ss_pred Cc-ceE---Ee-EecCCccCCcccCCCCCCCHHHHHHHHHHcCCEE---EECCCCC------------------------
Q 012095 387 QG-AFY---LF-IDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA---LVPGDAF------------------------ 434 (471)
Q Consensus 387 ~~-g~~---~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~---v~pg~~f------------------------ 434 (471)
.+ +.. ++ +.+++.. .. ..+..++.+.|.+++||. +.+|...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~----~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 368 (418)
T 2c81_A 296 PQVSRQTYYGYVFRFDPVK---FG----GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEA 368 (418)
T ss_dssp TTEEECCCSEEEEEECGGG---TT----TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHH
T ss_pred CCCcccccEEEEEEEcccc---cc----ccCHHHHHHHHHHcCCCCcccccccccccccCchhccccccccccccccccc
Confidence 55 332 22 6665300 00 026788999888766999 8887521
Q ss_pred ----CC--------CCcEEEEee--c-CHHHHHHHHHHHHHHHHhhC
Q 012095 435 ----GD--------DTCIRISYA--A-SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 435 ----~~--------~~~iRis~~--~-~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. .+.|||++. . ++++++++++.|++++++++
T Consensus 369 ~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~ 415 (418)
T 2c81_A 369 YWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFC 415 (418)
T ss_dssp HHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhc
Confidence 00 147999997 3 78999999999999988754
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=6.6e-32 Score=281.61 Aligned_cols=327 Identities=13% Similarity=0.098 Sum_probs=246.4
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcE--EEeCChHHHHHHHHHHhcCCC--------Ce
Q 012095 112 LIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQI--LVSNGAKQSILQAVLAVCSPG--------DE 181 (471)
Q Consensus 112 ~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i--~it~G~~~al~~~~~~l~~~g--------d~ 181 (471)
.+.+++..........|....+..++++.+++++.+.+|.+.+++++ ++|+|+++++..+++++.++| |+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~ 194 (514)
T 3mad_A 115 FLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPE 194 (514)
T ss_dssp HHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCE
T ss_pred HHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCe
Confidence 34444444333444556556677899999999999999976555788 999999999999999998776 99
Q ss_pred EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC
Q 012095 182 VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP 261 (471)
Q Consensus 182 Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~ 261 (471)
|+++.|+|.++...++..|++++.++++. ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|++|
T Consensus 195 Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~- 268 (514)
T 3mad_A 195 AVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEH- 268 (514)
T ss_dssp EEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHH-
T ss_pred EEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHh-
Confidence 99999999999999999999999999874 5779999999999999999999999999999999 89999999999
Q ss_pred CeEEEEccCCCccccC-----CCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh-------
Q 012095 262 RLLVLSDEIYEHIIYA-----PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS------- 329 (471)
Q Consensus 262 ~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~------- 329 (471)
|++||+||+|..+.+. +.....+. .. ..+..+++.|++|.++ +|.++||++++++.+........
T Consensus 269 ~i~livDea~~~~~~~~~~~~g~~~~~~~-~~-~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 345 (514)
T 3mad_A 269 GIGCHVDACLGGFILPWAERLGYPVPPFD-FR-LEGVTSVSADTHKYGY-GAKGTSVILYRRPDLLHYQYFIAADWPGGL 345 (514)
T ss_dssp TCEEEEECTTTTTTHHHHHHTTCCCCCCS-TT-STTCCEEEECTTTTTC-CCSSCEEEEESSHHHHTTTCEEESSCTTCS
T ss_pred CCeEEEecccccccchhHHhcCCCCCccc-cc-CCCCcEEEECchhccC-CCCCeEEEEEeCHHHhccccccccccCCCc
Confidence 9999999999987541 11111121 11 1345688999999974 78899999987765543211000
Q ss_pred ----cccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCccc
Q 012095 330 ----QFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAE 405 (471)
Q Consensus 330 ----~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~ 405 (471)
....+.+.....++.+++... ...++++..++..++++++.+.|++++|+++..+..+ ++|+..+..
T Consensus 346 ~~~~~~~gs~~~~~~~a~~aal~~l--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~-~~~~~~~~~------ 416 (514)
T 3mad_A 346 YFSPTFAGSRPGALSATAWAAMLSL--GEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPLW-VIAVASDEL------ 416 (514)
T ss_dssp EEESSSCSSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCSS-EEEEECSSS------
T ss_pred ccCCccCCCCchHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCeE-EEEEeCCCC------
Confidence 001122222222333333210 1466788899999999999999999989988766655 466665432
Q ss_pred CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHHHHHHHHHHHhhC
Q 012095 406 GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 406 ~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~~~~l~~~l~~~~ 466 (471)
+..++.+.|.++ ||.+ +|..| ++++|+++.. +++++++++++|++++++++
T Consensus 417 ------~~~~l~~~L~~~-Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~ 470 (514)
T 3mad_A 417 ------NIYQVMEEMAGR-GWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVR 470 (514)
T ss_dssp ------CHHHHHHHHHTT-TCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHhc-CCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899998876 9887 55433 5789999983 56899999999999998764
No 153
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=100.00 E-value=2.8e-31 Score=271.32 Aligned_cols=331 Identities=14% Similarity=0.098 Sum_probs=238.4
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|.+ .++ .++.+.+++.+++.+.. .|+. ....++++.+++.+.+.+| .++|++++|+++++.
T Consensus 74 ~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~-~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~sGseA~~ 147 (439)
T 2oat_A 74 EGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLT-LTSR-AFYNNVLGEYEEYITKLFN----YHKVLPMNTGVEAGE 147 (439)
T ss_dssp TCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCS-CCCT-TSEESSHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcC-cccC-ccCCHHHHHHHHHHHHhcC----CCEEEEeCCHHHHHH
Confidence 5778999999875 455 68999999999986532 2211 1112334444444444444 479999999999999
Q ss_pred HHHHHhc---------CCC-CeEEEcCCCCCChH-HHHHHcC------------CEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLAVC---------SPG-DEVIIPAPFWVSYP-EMARIAD------------ATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~l~---------~~g-d~Vlv~~p~y~~~~-~~~~~~G------------~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++++. .+| |.|++.+|+|+++. ..+...| ..++.+|. .|+++|+++++
T Consensus 148 ~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~ 220 (439)
T 2oat_A 148 TACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQ 220 (439)
T ss_dssp HHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTT
T ss_pred HHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 9998865 467 89999999998764 3444444 45666664 28999999994
Q ss_pred -cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 227 -EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 227 -~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
+++++|+++..+|+||. +++++++++|.++|++| |+++|+||+|.++.+.+... .+... +.... + .||||.+
T Consensus 221 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~g~~g~~~-~~~~~-~~~~D-i--~t~sK~l 294 (439)
T 2oat_A 221 DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRH-QVLFIADEIQTGLARTGRWL-AVDYE-NVRPD-I--VLLGKAL 294 (439)
T ss_dssp STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-GGGGG-TCCCS-E--EEECGGG
T ss_pred CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCcch-hHHHh-CCCCc-E--EEecccc
Confidence 56666655544678996 57999999999999999 99999999998765444211 11111 11112 2 3899999
Q ss_pred Cccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 305 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 305 g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
+ +| +|+||+++++++++.+.......+++.+++++.++.++|+. .++ ++..++++++++++.+.|+++ ++.+
T Consensus 295 ~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~l-~~~~ 367 (439)
T 2oat_A 295 S-GGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEV---LEE--ENLAENADKLGIILRNELMKL-PSDV 367 (439)
T ss_dssp G-TTSSCCEEEEECHHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHH---HHH--TTHHHHHHHHHHHHHHHHTTS-CTTT
T ss_pred c-CCCCCeEEEEECHHHHhccCCCCcccCCCcCHHHHHHHHHHHHH---Hhh--hhHHHHHHHHHHHHHHHHHHh-cCCC
Confidence 8 78 99999999999888776543455677899999999888874 111 256778888999999999886 4432
Q ss_pred ---eCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHH
Q 012095 384 ---SEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERI 458 (471)
Q Consensus 384 ---~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l 458 (471)
.++ .|.++|+.+++..+ .+..++++.|+++ ||.+.|+. ++++|+++. .+++++++++++|
T Consensus 368 ~~~~~~-~g~~~~v~l~~~~~---------~~~~~l~~~l~~~-Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l 432 (439)
T 2oat_A 368 VTAVRG-KGLLNAIVIKETKD---------WDAWKVCLRLRDN-GLLAKPTH----GDIIRFAPPLVIKEDELRESIEII 432 (439)
T ss_dssp EEEEEE-ETTEEEEEECCCSS---------CCHHHHHHHHHHT-TEECCBSS----SSEEEECCCTTCCHHHHHHHHHHH
T ss_pred cEEEEe-eeeEEEEEEecCcc---------HHHHHHHHHHHHC-CeEEecCC----CCEEEEECccCCCHHHHHHHHHHH
Confidence 233 45557888864200 1477899998876 99999852 578999776 4999999999999
Q ss_pred HHHHHh
Q 012095 459 KKGLLT 464 (471)
Q Consensus 459 ~~~l~~ 464 (471)
++++++
T Consensus 433 ~~~l~~ 438 (439)
T 2oat_A 433 NKTILS 438 (439)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999875
No 154
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-32 Score=278.61 Aligned_cols=351 Identities=14% Similarity=0.134 Sum_probs=228.3
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|++++|+..|. ..++. |+.+.+++.+++.+....+.+.....+|++.++++ ++ .+++|++|+|+++++.
T Consensus 53 ~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~----~~---~~~~v~~~~sGsea~~ 125 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGTPTALEVKFAKMLKEA----MP---ALDKVRFVNSGTEAVM 125 (434)
T ss_dssp TCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHH----CT---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHh----CC---CCCEEEEeCchHHHHH
Confidence 578899999887 44553 78999999998876543233544445555555554 43 5689999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCE-EEEecCCCCCCCc------------CCHHHHHhhhcc---CCcE
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARIADAT-PVILPTRISENFL------------LDPKVLESKLTE---KSRL 231 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~-~~~v~~~~~~~~~------------ld~e~l~~~l~~---~~~~ 231 (471)
.+++.+.. ++|.|++.+|+|+++...+...+.. ...+......++. -|+++|++++++ ++++
T Consensus 126 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 205 (434)
T 3l44_A 126 TTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAA 205 (434)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEE
Confidence 99987764 6799999999999876544433322 1111111001100 189999998863 4445
Q ss_pred EEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCCCceEEEecCCcccCccch
Q 012095 232 LILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMWERTLTVNGFSKAFAMTGW 309 (471)
Q Consensus 232 i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 309 (471)
|+++.++|++|.+. +++++++|.++|++| |++||+||+|.+| ..+... ........ + +.||||.++ +|+
T Consensus 206 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~illI~DEv~~g~-~~g~~~~~~~~~~~~--d----i~t~sK~~~-~G~ 276 (434)
T 3l44_A 206 ILVEPIVGNFGIVEPKPGFLEKVNELVHEA-GALVIYDEVITAF-RFMYGGAQDLLGVTP--D----LTALGKVIG-GGL 276 (434)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTT-TSSSSCHHHHHTCCC--S----EEEEEGGGG-TTS
T ss_pred EEEcCCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccce-eccccHHHHHcCCCC--C----eeehhhhhc-CCc
Confidence 54554456666655 899999999999999 9999999999987 443211 11122211 1 558999998 899
Q ss_pred hheeeEcCHHHHHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC
Q 012095 310 RLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP 386 (471)
Q Consensus 310 R~G~v~~~~~~i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p 386 (471)
|+||+++++++++.+... ....+++.+++++.++.++|+.... ++.+++.++..+..++.+.+.+.+.+.+....+
T Consensus 277 ~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 355 (434)
T 3l44_A 277 PIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQ-EGLYEKLDELGATLEKGILEQAAKHNIDITLNR 355 (434)
T ss_dssp SCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 999999999999887652 2334677899999999999874221 333444444333444444443333432333444
Q ss_pred CcceEEeEecCCccCCccc--CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAE--GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.|.| +++.+......... .........++++.|+++ ||.+.|+. .+++|+++..+++++++++++|++++++
T Consensus 356 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 356 LKGA-LTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQE-GVNLAPSK----YEAWFLTTEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp ETTE-EEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHT-TEECCSST----TCCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eccE-EEEEEecCcccchhhccccCHHHHHHHHHHHHHC-CeEEeecC----CCcEEEecccCHHHHHHHHHHHHHHHHH
Confidence 4454 56665321000000 000000236788888876 99999975 3578998878999999999999999987
Q ss_pred hC
Q 012095 465 LR 466 (471)
Q Consensus 465 ~~ 466 (471)
++
T Consensus 430 ~~ 431 (434)
T 3l44_A 430 LA 431 (434)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 155
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-31 Score=275.63 Aligned_cols=332 Identities=12% Similarity=0.077 Sum_probs=253.6
Q ss_pred CChHHHHHHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC-----C
Q 012095 108 DTPVLIAEAGINAIRE----GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS-----P 178 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~----~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~-----~ 178 (471)
..++.+.+++.+++.. +..+|...+|..++++.+++++.+.+|.+.+++++++|+|+++++..+++++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 3457788888877765 345566667888999999999999999766678999999999999999998865 5
Q ss_pred C---CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHH
Q 012095 179 G---DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIAR 255 (471)
Q Consensus 179 g---d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~ 255 (471)
| |+|+++.|+|.++...++..|++++.+|++. +++.+|+++|++++++++++|++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999999874 36789999999999999999999999999999999 889999
Q ss_pred HHHhCCCeEEEEccCCCccccC-----CCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHh-
Q 012095 256 IVAKHPRLLVLSDEIYEHIIYA-----PATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQS- 329 (471)
Q Consensus 256 l~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~- 329 (471)
+|++| |+++|+|++|..+... +....+..... ..+..+++.|++|.++ +|.++||++++++.+........
T Consensus 231 la~~~-g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~-~~g~d~~~~s~~K~l~-~~~~~g~~~~~~~~~~~~~~~~~~ 307 (497)
T 3mc6_A 231 IAQKY-KLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFR-VPGVTSISCDTHKYGF-APKGSSVIMYRNSDLRMHQYYVNP 307 (497)
T ss_dssp HHHHT-TCCEEEETTTTHHHHGGGTTTTCCSCCCCSTT-STTCCEEEEETTTTTC-CCSSCEEEECSSHHHHTTTSCCBT
T ss_pred HHHHh-CCEEEEECcchhhhhhhhhhhcccCCcccccc-CCCCcEEEECchhhcC-CCCCceeEEecCHHHHhhhhcccc
Confidence 99999 9999999999865321 11111011111 1345688899999874 78899999988766554321110
Q ss_pred cccC----CC------C---hHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeee-CCCcceEEeE
Q 012095 330 QFTS----GA------S---SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMS-EPQGAFYLFI 394 (471)
Q Consensus 330 ~~~~----~~------~---~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~-~p~~g~~~~~ 394 (471)
.+.. .+ + ..++.++...+. ..++++..++..++++++.+.|.+ ++|+++. +|.++++ ++
T Consensus 308 ~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v-~~ 381 (497)
T 3mc6_A 308 AWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG-----ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVI-SF 381 (497)
T ss_dssp TCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEE-EE
T ss_pred cccCCCcCCcCcccCCcchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEE-EE
Confidence 0000 00 1 334555555554 456778888899999999999999 6899886 4555654 44
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-CHHHHHHHHHHHHHHHHhhCCC
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA-SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~-~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
..+.. +..++.+.|.++ ||.+.++.. +..+|+++.. +++++++++++|++++++++..
T Consensus 382 ~~~~~------------~~~~l~~~L~~~-Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~~ 440 (497)
T 3mc6_A 382 SSKTL------------NIHELSDRLSKK-GWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKSE 440 (497)
T ss_dssp ECTTT------------THHHHHHHHHTT-TCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred eCCCC------------CHHHHHHHHHhC-CEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 54422 678899988876 998877543 3578999887 8899999999999999877543
No 156
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=100.00 E-value=2.3e-31 Score=271.55 Aligned_cols=333 Identities=14% Similarity=0.094 Sum_probs=232.1
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. .+++ .++.+.+++.+++.+.. .|+. ....+++..+++.+.+.+| .++|++++|+++++.
T Consensus 63 ~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~-~~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~sGseA~~ 136 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLT-ICSR-AFFSVPLGICERYLTNLLG----YDKVLMMNTGAEANE 136 (433)
T ss_dssp TCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCS-CCCT-TSEEHHHHHHHHHHHHHHT----CSEEEEESSHHHHHH
T ss_pred CCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCC-CccC-CcCCHHHHHHHHHHHhhcC----CCeEEEeCCHHHHHH
Confidence 577899999875 4666 68999999999986532 2221 1234566666666666665 479999999999999
Q ss_pred HHHHHhc---------CCC-CeEEEcCCCCCChHH-HHHHcC------------CEEEEecCCCCCCCcCCHHHHHhhh-
Q 012095 170 QAVLAVC---------SPG-DEVIIPAPFWVSYPE-MARIAD------------ATPVILPTRISENFLLDPKVLESKL- 225 (471)
Q Consensus 170 ~~~~~l~---------~~g-d~Vlv~~p~y~~~~~-~~~~~G------------~~~~~v~~~~~~~~~ld~e~l~~~l- 225 (471)
.+++++. .+| |.|++.+|+|+++.. .+...| ..++.+|. .|+++|++++
T Consensus 137 ~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~ 209 (433)
T 1z7d_A 137 TAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELK 209 (433)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHHHHHT
T ss_pred HHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhC
Confidence 9988753 478 999999999987654 333333 23444543 2899999999
Q ss_pred ccCCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 226 TEKSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
++++++|+++..+|+||.. ++++.+++|.++|++| |++||+||+|.++.+.+.. ..+.... .... +.||||.+
T Consensus 210 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~g~~g~~-~~~~~~~-~~~d---i~t~sK~l 283 (433)
T 1z7d_A 210 DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKY-NVLFVADEVQTGLGRTGKL-LCVHHYN-VKPD---VILLGKAL 283 (433)
T ss_dssp STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-SGGGGGT-CCCS---EEEECGGG
T ss_pred CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHc-CCEEEEecCccCCCcCCcc-hhhHhcC-CCCC---EEEECccc
Confidence 5667766655446789974 7888999999999999 9999999999876444421 1111111 1112 23899999
Q ss_pred Cccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----C
Q 012095 305 AMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----E 379 (471)
Q Consensus 305 g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~ 379 (471)
| +| +|+||+++++++++.+.......+++.+++++.++.++|+.. ++ +++.++++++++++.+.|+++ +
T Consensus 284 ~-~G~~~~G~v~~~~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~ 357 (433)
T 1z7d_A 284 S-GGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVL---IN--EKLCENAEKLGGPFLENLKRELKDSK 357 (433)
T ss_dssp G-TTSSCCEEEEECHHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred c-CCCCCeEEEEECHHHHhhhccccccccCCCCHHHHHHHHHHHHHH---Hh--ccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9 89 999999999999887765434556778999999998888741 11 245556666777777776643 3
Q ss_pred CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHH
Q 012095 380 GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVER 457 (471)
Q Consensus 380 g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~ 457 (471)
.+....+. |.++|+.++... .+..++++.|+++ ||.+.|+. .+++|++++. +++++++++++
T Consensus 358 ~~~~~~~~-g~~~~i~~~~~~----------~~~~~~~~~l~~~-Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~ 421 (433)
T 1z7d_A 358 IVRDVRGK-GLLCAIEFKNEL----------VNVLDICLKLKEN-GLITRDVH----DKTIRLTPPLCITKEQLDECTEI 421 (433)
T ss_dssp TEEEEEEE-TTEEEEEECTTT----------CCHHHHHHHHHHT-TEECCEET----TTEEEECCCTTCCHHHHHHHHHH
T ss_pred CeEEEEee-eeEEEEEEccCh----------hHHHHHHHHHHHC-CeEEecCC----CCEEEEECCcCCCHHHHHHHHHH
Confidence 22333344 455788886420 1577899998875 99999852 5789998764 99999999999
Q ss_pred HHHHHHhhC
Q 012095 458 IKKGLLTLR 466 (471)
Q Consensus 458 l~~~l~~~~ 466 (471)
|+++++++.
T Consensus 422 l~~~l~~~~ 430 (433)
T 1z7d_A 422 IVKTVKFFD 430 (433)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 999998764
No 157
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=100.00 E-value=1.3e-31 Score=274.74 Aligned_cols=352 Identities=11% Similarity=0.045 Sum_probs=237.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+.+++.+++.+. ..|.+..+..+.++++++++.+.++. ..++|++|+|+++++.
T Consensus 42 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~ 118 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKI-AHSTLLGMTNVPATQLAETLIDISPK--KLTRVFYSDSGAEAME 118 (448)
T ss_dssp TSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTC-SCCCCSSSEEHHHHHHHHHHHHHSCT--TEEEEEEESSHHHHHH
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhc-cCccccccCCHHHHHHHHHHHHhCCC--CCCEEEEeCchHHHHH
Confidence 577899999875 34443 789999999998764 33445567778899999999888753 4579999999999999
Q ss_pred HHHHHhcC----CC----CeEEEcCCCCCChHHHHHHcCC-------------EEEEecCCCCCCCcC-----------C
Q 012095 170 QAVLAVCS----PG----DEVIIPAPFWVSYPEMARIADA-------------TPVILPTRISENFLL-----------D 217 (471)
Q Consensus 170 ~~~~~l~~----~g----d~Vlv~~p~y~~~~~~~~~~G~-------------~~~~v~~~~~~~~~l-----------d 217 (471)
.+++++.. +| |.|++.+|+|+++...+...+. .+..++.. +.|.. |
T Consensus 119 ~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d 196 (448)
T 3dod_A 119 IALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRDQC 196 (448)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhHHH
Confidence 99998865 44 9999999999887755444332 22333332 22222 4
Q ss_pred HHHHHhhhc---cCCcEEEEcCCC-CCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCC
Q 012095 218 PKVLESKLT---EKSRLLILCSPS-NPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWE 292 (471)
Q Consensus 218 ~e~l~~~l~---~~~~~i~i~~p~-NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 292 (471)
+++|+++++ +++++|+++.++ |++| .+.+++++++|.++|++| |++||+||+|.++.+.+... ......
T Consensus 197 ~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~~-a~~~~~---- 270 (448)
T 3dod_A 197 LRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY-DVLMIVDEVATGFGRTGKMF-ACEHEN---- 270 (448)
T ss_dssp HHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSS-GGGGGT----
T ss_pred HHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcccchh-hhhhcC----
Confidence 888999886 345556565555 7887 567888999999999999 99999999999875544321 111111
Q ss_pred ceEEEecCCcccCccch-hheeeEcCHHHHHHHHH-------HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTGW-RLGYIAGPKHFVAACNK-------IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G~-R~G~v~~~~~~i~~l~~-------~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
....+.+|||.++ .|+ |+||+++++++++.+.. .....+++.+++++.++.++|+.... +++++..++..
T Consensus 271 ~~~di~t~sK~l~-~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~ 348 (448)
T 3dod_A 271 VQPDLMAAGKGIT-GGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFES-ENIVEQVAEKS 348 (448)
T ss_dssp CCCSEEEECGGGG-TTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHH-TTHHHHHHHHH
T ss_pred CCCCEEEeccccc-CCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhc-ccHHHHHHHHH
Confidence 1112447899998 695 99999999999998865 44446678899999999999974211 24455556666
Q ss_pred HHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCC-CCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEE
Q 012095 365 RERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKI-ENSESLCRYLLDKAQVALVPGDAFGDDTCIRIS 443 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis 443 (471)
+..++.+.+ +.+++.+....+.|. ++|+.++...... ..+... ....++++.|+++ ||.+.|+. +++||+
T Consensus 349 ~~~~~~l~~-l~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-----~~iRi~ 419 (448)
T 3dod_A 349 KKLHFLLQD-LHALPHVGDIRQLGF-MCGAELVRSKETK-EPYPADRRIGYKVSLKMREL-GMLTRPLG-----DVIAFL 419 (448)
T ss_dssp HHHHHHHHH-HTTSTTEEEEEEETT-EEEEEECSBTTTT-BCCCGGGCHHHHHHHHHHHT-TEECCEET-----TEEEEC
T ss_pred HHHHHHHHH-HhcCCCeEEEEeeeE-EEEEEEccCcccc-cccchhhHHHHHHHHHHHHC-CcEEeccC-----CEEEEE
Confidence 666666666 666654544444444 5777776431100 000000 0036788988876 99999872 789996
Q ss_pred ee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 444 YA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 444 ~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+. .+++++++++++|+++++++.
T Consensus 420 ~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 420 PPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 54 599999999999999998764
No 158
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=100.00 E-value=6.5e-31 Score=264.31 Aligned_cols=322 Identities=15% Similarity=0.181 Sum_probs=240.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV 175 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l 175 (471)
++|+|+. |.+ |+.+++++.+++.+.. |.+..+..++++.++++++ .+++++|+|+++++..+++++
T Consensus 9 ~~i~~~~--p~~--~~~~~~a~~~~~~~~~--~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~~~~~~ 74 (393)
T 1mdo_A 9 DFLPFSR--PAM--GAEELAAVKTVLDSGW--ITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHIALMAL 74 (393)
T ss_dssp CCBCSCC--CCC--CHHHHHHHHHHHHHTC--CSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHT
T ss_pred cccccCC--CCC--CHHHHHHHHHHHhcCC--cCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHHHHHHc
Confidence 3677776 554 4677889988887643 4466788999999999872 248999999999999999999
Q ss_pred -cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHH
Q 012095 176 -CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIA 254 (471)
Q Consensus 176 -~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~ 254 (471)
+++||+|++++|+|+++...++..|++++.+++++ +++.+|++++++++++++++|+++ ||||.+.+ +++|.
T Consensus 75 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~---~~~i~ 147 (393)
T 1mdo_A 75 GIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD---LDAIY 147 (393)
T ss_dssp TCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---HHHHH
T ss_pred CCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---HHHHH
Confidence 89999999999999999999999999999999875 357799999999998888888875 48999988 89999
Q ss_pred HHHHhCCCeEEEEccCCCcc-ccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhccc
Q 012095 255 RIVAKHPRLLVLSDEIYEHI-IYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFT 332 (471)
Q Consensus 255 ~l~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~ 332 (471)
++|+++ +++||+|++|..+ .+.+. . +. . +++++.||||..+++|.|+||++++ +++++.+........
T Consensus 148 ~l~~~~-~~~li~D~a~~~g~~~~~~---~---~~--~-~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~ 217 (393)
T 1mdo_A 148 ALGERY-GIPVIEDAAHATGTSYKGR---H---IG--A-RGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGL 217 (393)
T ss_dssp HHHHHH-TCCBCEECTTCTTCEETTE---E---TT--S-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTE
T ss_pred HHHHHc-CCeEEEECccccCCeECCe---e---cC--C-CCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCC
Confidence 999999 9999999999963 33321 1 11 0 5689999993333455699999996 789988876543211
Q ss_pred ------------------------CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-C-
Q 012095 333 ------------------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-P- 386 (471)
Q Consensus 333 ------------------------~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p- 386 (471)
+..+.+...++...+. .+++..++.+++++++.+.|.+++ +++.. +
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-------~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~ 289 (393)
T 1mdo_A 218 GVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-------KLDALNARRAAIAAQYHQAMADLP-FQPLSLPS 289 (393)
T ss_dssp ECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHHHTSS-CEECCCCS
T ss_pred cccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCC-cccccCCC
Confidence 1134444444334333 245556666678888899998884 76542 2
Q ss_pred ----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC--------------CC-------CCcEE
Q 012095 387 ----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF--------------GD-------DTCIR 441 (471)
Q Consensus 387 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f--------------~~-------~~~iR 441 (471)
.+++++|+.++... .+ .+..++.+.|.++ ||.+.+|..+ .. ..++|
T Consensus 290 ~~~~~~~~~~~v~~~~~~----~~----~~~~~l~~~l~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 360 (393)
T 1mdo_A 290 WEHIHAWHLFIIRVDEAR----CG----ITRDALMASLKTK-GIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICS 360 (393)
T ss_dssp SCEECCCSCEEEECCHHH----HS----SCHHHHHHHHHHT-TBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEE
T ss_pred CCCCceeEEEEEEecccc----cc----cCHHHHHHHHHhC-CCCcccccCccccChhhhccCCccCChhHHHHHhCEEE
Confidence 35567888887300 00 1678899988775 9999998754 11 24799
Q ss_pred EEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 442 ISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 442 is~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+++.. ++++++++++.|+++++..
T Consensus 361 i~~~~~~t~~~i~~~~~~l~~~~~~~ 386 (393)
T 1mdo_A 361 LPLFPDMTESDFDRVITALHQIAGQG 386 (393)
T ss_dssp ECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 99985 9999999999999988654
No 159
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=100.00 E-value=1.4e-32 Score=283.11 Aligned_cols=370 Identities=15% Similarity=0.147 Sum_probs=249.7
Q ss_pred ccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCC------CCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Q 012095 70 PRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEP------DFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICH 143 (471)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~------~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~ 143 (471)
.+++.++++++..+......+...|.++++|..|.+ ++++ +.+.+++.+++..+...|++..+..+|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~~~y~~~~~~~~l~~~la~ 85 (467)
T 2oqx_A 7 FRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGDEAYSGSRSYYALAESVKN 85 (467)
T ss_dssp SCCCCCCCCCCCCHHHHHHHHHHTTSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCCCCSSSCHHHHHHHHHHHH
T ss_pred hheeeecccccccHHHHHHHHHHcCCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCcceeccCchhHHHHHHHHH
Confidence 355666666665555566666667777777777664 3333 677788888776666679888888999999999
Q ss_pred HHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCC-----C----CeEEEcCCCCCChHHHHHHcCCEEEEecC----CC
Q 012095 144 KLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP-----G----DEVIIPAPFWVSYPEMARIADATPVILPT----RI 210 (471)
Q Consensus 144 ~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~-----g----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~----~~ 210 (471)
++ | .+++++|+|+++++..++++++++ | |+|++..+.|.++.......|+.++.... +.
T Consensus 86 ~~----~----~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~ 157 (467)
T 2oqx_A 86 IF----G----YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDT 157 (467)
T ss_dssp HH----C----CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCT
T ss_pred Hh----C----cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccC
Confidence 87 2 368999999999999999999888 8 99888754445555666777887765422 11
Q ss_pred C----CCCcCCHHHHHhhhc----cCCcEEEEcCCCCCc-ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc--------
Q 012095 211 S----ENFLLDPKVLESKLT----EKSRLLILCSPSNPT-GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-------- 273 (471)
Q Consensus 211 ~----~~~~ld~e~l~~~l~----~~~~~i~i~~p~NPt-G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-------- 273 (471)
+ .++.+|+++|+++++ +++++|++++|+||| |.+++.+++++|+++|++| |++||+|+++..
T Consensus 158 ~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~-gi~li~D~a~~~e~~~~~~~ 236 (467)
T 2oqx_A 158 GVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKY-DIPVVMDSARFAENAYFIKQ 236 (467)
T ss_dssp TSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHT-TCCEEEECTTHHHHHHHHHH
T ss_pred CCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhhhhhhhccc
Confidence 1 235689999999997 378999999999998 8999999999999999999 999999966543
Q ss_pred --cccCCCCcccccc-CCCCCCceEEEecCCcccCcc-chhheeeEcCHH-HHHHHHHHHhc---c----cCC-CChHHH
Q 012095 274 --IIYAPATHTSFAS-LPGMWERTLTVNGFSKAFAMT-GWRLGYIAGPKH-FVAACNKIQSQ---F----TSG-ASSISQ 340 (471)
Q Consensus 274 --~~~~~~~~~~~~~-~~~~~~~~i~~~S~SK~~g~~-G~R~G~v~~~~~-~i~~l~~~~~~---~----~~~-~~~~~q 340 (471)
..+.+.....+.. .....+ +++.|+||.+|++ | ||++++++ +++.+.++... . ..+ .+....
T Consensus 237 ~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (467)
T 2oqx_A 237 REAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAM 311 (467)
T ss_dssp HCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHH
T ss_pred ccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHH
Confidence 1232321111110 001112 4578999999877 5 88888877 55554443321 1 111 122222
Q ss_pred HHHHHHHhccCCChHHH-HHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCcc-CCcccCCCCCCCHHHHHH
Q 012095 341 KAGVAALGLGYAGGEVV-SKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYY-GSEAEGFGKIENSESLCR 418 (471)
Q Consensus 341 ~aa~~~L~~~~~~~~~~-~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 418 (471)
.+....+. +++ ++..+++.++++++.+.|.++ |+.+. |.+++++|++++... +..... .+...+++
T Consensus 312 ~al~~~l~------~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~ 379 (467)
T 2oqx_A 312 ERLAVGLY------DGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHIPADQ----FPAQALAC 379 (467)
T ss_dssp HHHHHHHH------HTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTSCGGG----CHHHHHHH
T ss_pred HHHHHhhH------hhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccCCccc----ccHHHHHH
Confidence 11112222 122 123445567888899999888 88887 788889999885210 000000 01456688
Q ss_pred HHHHcCCEEEECCCCC--C-----------CCCcEEEEee---cCHHHHHHHHHHHHHHHHhhC
Q 012095 419 YLLDKAQVALVPGDAF--G-----------DDTCIRISYA---ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 419 ~Ll~~~gV~v~pg~~f--~-----------~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 466 (471)
.|+++.||.+.||+.| + ..+++|++++ .+++++++++++|++++++..
T Consensus 380 ~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 380 ELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred HHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 8845569999995532 2 1379999999 689999999999999997654
No 160
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=3e-31 Score=268.84 Aligned_cols=325 Identities=12% Similarity=0.131 Sum_probs=239.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP----NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
+.+.|..+.+. ++|+.+.+++.+++.+....+.. ..|..+..+.+.+.+.+.+|. ++++|++|+|+++++..+
T Consensus 28 ~~~yld~~~~~-~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~v~~~~g~t~al~~a 104 (416)
T 1qz9_A 28 GVIYLDGNSLG-ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA--RDGEVVVTDTTSINLFKV 104 (416)
T ss_dssp TCEECCTTTSC-CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC--CTTSEEECSCHHHHHHHH
T ss_pred CeEeecCCCcC-CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC--CcccEEEeCChhHHHHHH
Confidence 47888888876 56778899999988753222211 113334445555555555664 568999999999999988
Q ss_pred HHHhc------CCCCe-EEEcCCCCCChHHHH----HHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCC
Q 012095 172 VLAVC------SPGDE-VIIPAPFWVSYPEMA----RIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 172 ~~~l~------~~gd~-Vlv~~p~y~~~~~~~----~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~ 238 (471)
+++++ ++||+ |+++.++|+++...+ +.. |++++.+++ +++|++++++++++|++++|+
T Consensus 105 l~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~~~v~~~~~~ 175 (416)
T 1qz9_A 105 LSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDTAVVMLTHVN 175 (416)
T ss_dssp HHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTEEEEEEESBC
T ss_pred HHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCceEEEEeccc
Confidence 88876 89997 455566787655432 334 999998875 788999998889999999999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhh-eeeEcC
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGP 317 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~ 317 (471)
||||.+++ +++|.++|++| |++||+||+|... .....+.. .+..+++.|++|.++ +|.++ ||++++
T Consensus 176 nptG~~~~---l~~i~~l~~~~-~~~li~D~a~~~g----~~~~~~~~----~~~d~~~~s~~K~l~-~g~~~~g~l~~~ 242 (416)
T 1qz9_A 176 YKTGYMHD---MQALTALSHEC-GALAIWDLAHSAG----AVPVDLHQ----AGADYAIGCTYKYLN-GGPGSQAFVWVS 242 (416)
T ss_dssp TTTCBBCC---HHHHHHHHHHH-TCEEEEECTTTTT----TSCCCHHH----HTCSEEEECSSSTTC-CCTTCCCEEEEC
T ss_pred cCcccccC---HHHHHHHHHHc-CCEEEEEcccccc----CcCCChhh----cCCCEEEecCcccCC-CCCCCeEEEEEC
Confidence 99999999 89999999999 9999999999742 11111211 134588999999985 78888 999999
Q ss_pred HHHHHHHHHHH-----------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 318 KHFVAACNKIQ-----------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 318 ~~~i~~l~~~~-----------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+++++.+.... .....+++...+.++.++|+.. ..+++++++++++++++++.+.
T Consensus 243 ~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~ 320 (416)
T 1qz9_A 243 PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVF--AQTDMASLRRKSLALTDLFIEL 320 (416)
T ss_dssp TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH--TTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHHHHH
Confidence 98876654321 1112346777777777777642 1245788899999999999999
Q ss_pred hcCC-C--CCeeeCCC----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec-
Q 012095 375 FGEL-E--GVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA- 446 (471)
Q Consensus 375 L~~~-~--g~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~- 446 (471)
|.++ + |+.+..+. .+.++|++++ +..++.+.|.++ ||.+.. ..++++|++++.
T Consensus 321 L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--------------~~~~l~~~l~~~-gi~~~~----~~~~~lRis~~~~ 381 (416)
T 1qz9_A 321 VEQRCAAHELTLVTPREHAKRGSHVSFEHP--------------EGYAVIQALIDR-GVIGDY----REPRIMRFGFTPL 381 (416)
T ss_dssp HHHHHTTSCCEECSCSSGGGBCSEEEEECT--------------THHHHHHHHHTT-TEECEE----ETTTEEEEECCTT
T ss_pred HHhhccCCCeEEeCCCCHHHcCCEEEEecC--------------CHHHHHHHHHhC-CcEecc----CCCCeEEEeCccc
Confidence 9885 6 88887664 2445788875 356888888765 998753 235799999973
Q ss_pred --CHHHHHHHHHHHHHHHHhhC
Q 012095 447 --SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 447 --~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++++++++++|++++++..
T Consensus 382 ~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 382 YTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHhccc
Confidence 99999999999999998654
No 161
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.98 E-value=2.5e-31 Score=272.93 Aligned_cols=342 Identities=13% Similarity=0.038 Sum_probs=243.0
Q ss_pred cCC--CeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 93 AGV--SVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 93 ~g~--~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
.|+ .+||+..|. ..++. ++.+.+++.+++.+.. .|....+..+....+++.+.+.++ ...++|++|+|++++
T Consensus 71 dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~L~e~la~~~~--~~~~~v~~~~sGseA 147 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN-HVMFGGLTHEPAARLAKLLVDITP--AGLDTVFFSDSGSVS 147 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCS-CCCSSSEECHHHHHHHHHHHHHSS--TTEEEEEEESSHHHH
T ss_pred CCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhcc-CccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCcHHHH
Confidence 677 899999884 45553 7899999999887632 222223345666777777776665 355799999999999
Q ss_pred HHHHHHHhcC-------CC-CeEEEcCCCCCChHHHHHHcCC--------------EEEEecCCCCCCCcCCHHHHHhhh
Q 012095 168 ILQAVLAVCS-------PG-DEVIIPAPFWVSYPEMARIADA--------------TPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 168 l~~~~~~l~~-------~g-d~Vlv~~p~y~~~~~~~~~~G~--------------~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
+..+++.+.. +| +.|++.+++|.++...+...+. .+..++.........|+++|++++
T Consensus 148 ~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l 227 (457)
T 3tfu_A 148 VEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQL 227 (457)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHH
Confidence 9999988865 66 5899999999887655544421 233344332221224889999998
Q ss_pred c---cCCcEEEEcC-CCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecC
Q 012095 226 T---EKSRLLILCS-PSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGF 300 (471)
Q Consensus 226 ~---~~~~~i~i~~-p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 300 (471)
+ +++++|+++. ++||+|..+ +++.+++|.++|++| |+++|+||+|.+|...+... .+..... ... +-||
T Consensus 228 ~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~gr~G~~~-a~~~~~~-~pd---iit~ 301 (457)
T 3tfu_A 228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRY-EVLLIFDEIATGFGRTGALF-AADHAGV-SPD---IMCV 301 (457)
T ss_dssp HHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSS-THHHHTC-CCS---EEEE
T ss_pred HhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcCccCCccccchh-HhHhcCC-Cce---EEEE
Confidence 7 5677787877 899999766 788899999999999 99999999999875544311 1111111 122 2289
Q ss_pred CcccCccc-hhheeeEcCHHHHHHHHHH-----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 301 SKAFAMTG-WRLGYIAGPKHFVAACNKI-----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 301 SK~~g~~G-~R~G~v~~~~~~i~~l~~~-----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
||.++ .| +|+||+++++++++.+... ....+++.+++++.++.++|+... + +...++++++++++.+.
T Consensus 302 sK~l~-gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~---~--~~~~~~~~~~~~~l~~~ 375 (457)
T 3tfu_A 302 GKALT-GGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLL---G--QDWRTRITELAAGLTAG 375 (457)
T ss_dssp CGGGG-TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHH---T--SCHHHHHHHHHHHHHHH
T ss_pred Chhhh-CCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHh---h--hHHHHHHHHHHHHHHHH
Confidence 99886 56 7999999999999988632 233567789999999999887411 1 23445555566666666
Q ss_pred hcCC---CCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHH
Q 012095 375 FGEL---EGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLT 449 (471)
Q Consensus 375 L~~~---~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e 449 (471)
|.++ +++....+.|. |+++.+++. .+..++++.|+++ ||.+.|.. +++|+++. .+++
T Consensus 376 L~~l~~~~~v~~vr~~G~-~~~i~l~~~-----------~~~~~~~~~l~~~-Gv~v~~~~-----~~lRi~p~~~~t~e 437 (457)
T 3tfu_A 376 LDTARALPAVTDVRVCGA-IGVIECDRP-----------VDLAVATPAALDR-GVWLRPFR-----NLVYAMPPYICTPA 437 (457)
T ss_dssp HGGGGGSTTEEEEEECSS-CEEEEESSC-----------CCHHHHHHHHHHT-TEECCCBT-----TEEEECCCTTCCHH
T ss_pred HHHHhcCCCeeeeecCCe-EEEEEECCc-----------ccHHHHHHHHHHC-CeEEEecC-----CEEEEECCCCCCHH
Confidence 6653 45555555555 467787653 1578899999887 99998842 68999865 4999
Q ss_pred HHHHHHHHHHHHHHhhCC
Q 012095 450 TLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~~~~ 467 (471)
++++++++|+++++++..
T Consensus 438 ei~~~l~~L~~~l~~~~~ 455 (457)
T 3tfu_A 438 EITQITSAMVEVARLVGS 455 (457)
T ss_dssp HHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhcc
Confidence 999999999999987654
No 162
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.98 E-value=5.3e-31 Score=271.92 Aligned_cols=348 Identities=17% Similarity=0.132 Sum_probs=256.0
Q ss_pred HHHHHHHHHHhcCC----CeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCC---CCCCHHHHHHHHHHHHHHhCCCCC
Q 012095 82 AITDQATALAQAGV----SVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTP---NAGTLELRSAICHKLKEENGLSYT 154 (471)
Q Consensus 82 ~~~~~~~~~~~~g~----~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~~~ 154 (471)
++......+...+. .++.|+ |.... ..+.+.+++.+.+ ...+.|.+ .+|..++++.+++++.+.+|.+.
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~-~~p~v~~~~~~~~-~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~- 124 (474)
T 1wyu_B 49 TLVRHYTGLSRRQVGVDTTFYPLG-SCTMK-YNPKLHEEAARLF-ADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA- 124 (474)
T ss_dssp HHHHHHHHHHTTCCCTTTSCCCBT-TTCCC-CCCHHHHHHHHTT-SSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-
T ss_pred HHHHHHHHHHhCCCCcccCccccc-ccccc-CCHHHHHHHHHHH-HhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-
Confidence 44445555555443 357777 54332 2344555555442 12333433 56778999999999999999642
Q ss_pred CCcEEEeCChHHHHHHHHHHh----cCCCC-----eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 155 PDQILVSNGAKQSILQAVLAV----CSPGD-----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l----~~~gd-----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
.+++++|+++++..++.++ .++|| +|++++|+|+++...++..|++++.++++. ++.+|+++|++++
T Consensus 125 --~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i 200 (474)
T 1wyu_B 125 --ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKREL 200 (474)
T ss_dssp --EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHC
T ss_pred --eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhh
Confidence 4778899999998755554 35887 999999999999999999999999999863 5779999999999
Q ss_pred ccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 226 TEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 226 ~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++++|++++| ||||.+. +++++|+++|++| ++++|+||+|..+.++. ..... .+..+++.|++|.|+
T Consensus 201 ~~~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~-g~~li~Dea~~~~~~g~---~~~~~----~g~di~~~s~~K~~~ 269 (474)
T 1wyu_B 201 GPHVAALMLTNP-NTLGLFE--RRILEISRLCKEA-GVQLYYDGANLNAIMGW---ARPGD----MGFDVVHLNLHKTFT 269 (474)
T ss_dssp STTEEEEEECSS-CTTSCCC--TTHHHHHHHHHHH-TCEEEEEGGGGGGTTTT---CCHHH----HTCSEEECCTTTTTC
T ss_pred CCCceEEEEECC-CCCcccC--CCHHHHHHHHHHc-CCEEEEeCchhhhhccC---CCccc----CCCcEEEEeCccccc
Confidence 988999999998 6899883 2399999999999 99999999998765421 11111 245688999999998
Q ss_pred cc-c---hhheeeEcCHHHHHHHHH-HH------------------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 306 MT-G---WRLGYIAGPKHFVAACNK-IQ------------------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 306 ~~-G---~R~G~v~~~~~~i~~l~~-~~------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
++ | .|+||+++++++++.+.. +. .....+.+.+++.++..++... ..+++++..+
T Consensus 270 ~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~--g~~~l~~~~~ 347 (474)
T 1wyu_B 270 VPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTL--GLEGLKKAAA 347 (474)
T ss_dssp CCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 76 5 499999999988776541 10 0112346777888888877631 2567888899
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCCcceE-EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC--CCCc
Q 012095 363 AFRERRDFLVKSFGELEGVKMSEPQGAFY-LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG--DDTC 439 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~~~~p~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~--~~~~ 439 (471)
++.++++++.+.|+++ |+++..+...+. +|++++.. .+..+++++|+++ ||.+ |+..|. .+++
T Consensus 348 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-Gi~~-~~~~~~~~~~~~ 413 (474)
T 1wyu_B 348 LAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQPPEG-----------FRALDLAKGLLEL-GFHP-PTVYFPLIVKEA 413 (474)
T ss_dssp HHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBCSTT-----------CCHHHHHHHHHHT-TCCC-CEESCSTTSTTC
T ss_pred HHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEcCCC-----------CCHHHHHHHHHHC-Cccc-cccccccccCCE
Confidence 9999999999999987 887743332331 45565321 2678999999877 8874 666664 3689
Q ss_pred EEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 440 IRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 440 iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
+||+++. +++++++++++|++++++
T Consensus 414 lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 414 LMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 9999997 899999999999998754
No 163
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.98 E-value=2.1e-31 Score=273.12 Aligned_cols=342 Identities=15% Similarity=0.145 Sum_probs=239.4
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPN-AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+.++|++.|. .+++. ++.+.+++.+++.+.. |... .+..++++.+++.+.+.++ ..+++|++|+|+++++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggsea~ 123 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD--YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSECA 123 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS--CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHHHH
T ss_pred CCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHHH
Confidence 466789998776 34544 7899999999876532 3222 4556778888888877665 3678999999999999
Q ss_pred HHHHHHhcC--------CCCeEEEcCCCCCChHH-HHHHcCC------------EEEEecCCC--CCCC-cCC-------
Q 012095 169 LQAVLAVCS--------PGDEVIIPAPFWVSYPE-MARIADA------------TPVILPTRI--SENF-LLD------- 217 (471)
Q Consensus 169 ~~~~~~l~~--------~gd~Vlv~~p~y~~~~~-~~~~~G~------------~~~~v~~~~--~~~~-~ld------- 217 (471)
..+++++.. +||.|++.+|+|+++.. .+...|. .+..++.+. ..+| ++|
T Consensus 124 ~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~ 203 (449)
T 3a8u_X 124 LTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIA 203 (449)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHH
Confidence 999988764 67999999999988653 4554431 234444321 1111 246
Q ss_pred -HHHHHhhhc----cCCcEEEEcCC-CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCC
Q 012095 218 -PKVLESKLT----EKSRLLILCSP-SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPG 289 (471)
Q Consensus 218 -~e~l~~~l~----~~~~~i~i~~p-~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~ 289 (471)
+++|+++++ +++++| +++| +||||. ..+++++++|.++|++| +++||+||+|.++.+.+... .....+.
T Consensus 204 ~~~~le~~l~~~~~~~~~~v-i~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~~~~~~~~~~- 280 (449)
T 3a8u_X 204 LADELLKLIELHDASNIAAV-FVEPLAGSAGVLVPPEGYLKRNREICNQH-NILLVFDEVITGFGRTGSMFGADSFGVT- 280 (449)
T ss_dssp HHHHHHHHHHHHCGGGEEEE-EECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSHHHHHTCC-
T ss_pred HHHHHHHHHHhcCCCCEEEE-EEcCccCCCCCccCCHHHHHHHHHHHHHh-CCEEEEeccccCccccCcchhhhhcCCC-
Confidence 999999886 344444 4556 578996 66799999999999999 99999999998764433211 1111121
Q ss_pred CCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH---------HhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 290 MWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI---------QSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 290 ~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~---------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
.. +.||||.++ +| +|+||+++++++++.+... ....+++.+++++.++.++|+.. ++ +.
T Consensus 281 --~d---i~s~sK~l~-~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~---~~--~~ 349 (449)
T 3a8u_X 281 --PD---LMCIAKQVT-NGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLL---QK--EN 349 (449)
T ss_dssp --CS---EEEECGGGG-TTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHH---HH--TT
T ss_pred --CC---EEEEccccc-CCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHH---Hh--cC
Confidence 12 228999998 68 9999999999999888753 12345677899999998888741 11 24
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC---eeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC
Q 012095 360 MVKAFRERRDFLVKSFGELEGV---KMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD 436 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~~~g~---~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~ 436 (471)
..++++++++++.+.|.++.++ ....+ .|+++|++++..... . ..+..++.+.|+++ ||.+.|+.
T Consensus 350 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~g~~~~i~~~~~~~~--~----~~~~~~~~~~l~~~-Gv~v~~~g---- 417 (449)
T 3a8u_X 350 LVQSVAEVAPHFEKALHGIKGAKNVIDIRN-FGLAGAIQIAPRDGD--A----IVRPFEAGMALWKA-GFYVRFGG---- 417 (449)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSTTEEEEEE-ETTEEEEEECCBTTB--S----SHHHHHHHHHHHHH-TEECEEET----
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEEee-eEEEEEEEEecCccc--c----cccHHHHHHHHHHC-CcEEecCC----
Confidence 5667777888888888764322 22233 456688888753100 0 00123688888876 99999972
Q ss_pred CCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 437 DTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 437 ~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
+++||++. .+++++++++++|+++++++
T Consensus 418 -~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 418 -DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp -TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 78999965 49999999999999998764
No 164
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.98 E-value=5.1e-31 Score=271.63 Aligned_cols=351 Identities=14% Similarity=0.096 Sum_probs=242.3
Q ss_pred cCCCeEEcCCC--CCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAG--EPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g--~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||+..| ...++. ++.+++|+.+++.+..+.|+...+..+.+..+++.+.+..+ ...++|++++|+++++.
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA~~ 130 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEAND 130 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHHHH
Confidence 57889999988 455553 78999999999987555565555667888888888888765 35679999999999999
Q ss_pred HHHHHhcC--------CCCeEEEcCCCCCChHHHHHHcCC------------EEEEecCCC--C-CCCcCC--------H
Q 012095 170 QAVLAVCS--------PGDEVIIPAPFWVSYPEMARIADA------------TPVILPTRI--S-ENFLLD--------P 218 (471)
Q Consensus 170 ~~~~~l~~--------~gd~Vlv~~p~y~~~~~~~~~~G~------------~~~~v~~~~--~-~~~~ld--------~ 218 (471)
.+++.+.. +++.|++.+|+|+++...+...+. .++.++... . +++ .| +
T Consensus 131 ~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~ 209 (472)
T 3hmu_A 131 TNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARA 209 (472)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHH
Confidence 99998874 458999999999998876665544 234454321 0 111 23 7
Q ss_pred HHHHhhhc----cCCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCc
Q 012095 219 KVLESKLT----EKSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWER 293 (471)
Q Consensus 219 e~l~~~l~----~~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~ 293 (471)
++|+++++ +++++|+++.++|++|.+. +++++++|.++|++| |+++|+||+|.+|...|.. ........ ...
T Consensus 210 ~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~-gillI~DEv~~gfgr~G~~-~a~~~~~v-~pd 286 (472)
T 3hmu_A 210 RELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY-DILLIADEVICGFGRTGNW-FGTQTMGI-RPH 286 (472)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHHTC-CCS
T ss_pred HHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEccccCCcccCcc-chhHHhCC-CCc
Confidence 88888886 3455565666677888655 899999999999999 9999999999987554421 11111111 111
Q ss_pred eEEEecCCcccCccchhheeeEcCHHHHHHHHH--HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHH-HHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNK--IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR-ERRDF 370 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~--~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~-~~r~~ 370 (471)
+.+|||.++..|+|+||+++++++++.+.. .....+++.+++++.++.++|+.. ++ +.+.++++ ++.++
T Consensus 287 ---i~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~---~~--~~~~~~~~~~~~~~ 358 (472)
T 3hmu_A 287 ---IMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRIL---EE--ENILDHVRNVAAPY 358 (472)
T ss_dssp ---EEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHHHHTHHHH
T ss_pred ---eeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHH---HH--hHHHHHHHHHHHHH
Confidence 336899998445999999999999998831 123346778999999999999741 11 23334444 44444
Q ss_pred HHHHhc---CCCCCeeeCCCcceEEeEecCCccCCcccCCCC--CCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe-
Q 012095 371 LVKSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK--IENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY- 444 (471)
Q Consensus 371 l~~~L~---~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~- 444 (471)
+.+.|+ +.+++....+.|.| +++.+...... ...+.. .....++++.|+++ ||++.|+. +++||+.
T Consensus 359 l~~~L~~l~~~~~v~~vr~~G~~-~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-----~~iRi~p~ 430 (472)
T 3hmu_A 359 LKEKWEALTDHPLVGEAKIVGMM-ASIALTPNKAS-RAKFASEPGTIGYICRERCFAN-NLIMRHVG-----DRMIISPP 430 (472)
T ss_dssp HHHHHHGGGGSTTEEEEEEETTE-EEEEECSCGGG-TCCBSSCTTHHHHHHHHHHHHT-TBCCEEET-----TEEEECCC
T ss_pred HHHHHHHHhcCCCeEEEEecCce-EEEEEecCccc-cccccchhHHHHHHHHHHHHHC-CcEEEecC-----CEEEEECC
Confidence 444443 34556666666665 45555421000 000000 00156788888876 99999863 7999994
Q ss_pred -ecCHHHHHHHHHHHHHHHHhh
Q 012095 445 -AASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 445 -~~~~e~i~~~~~~l~~~l~~~ 465 (471)
..+++++++++++|+++++++
T Consensus 431 ~~~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 431 LVITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 459999999999999998764
No 165
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.98 E-value=1.3e-30 Score=268.91 Aligned_cols=350 Identities=14% Similarity=0.117 Sum_probs=245.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||+..|. ..++. ++.+++|+.+++.+....| ...+..+.+.++++++.+.++. ..++|++++|+++++.
T Consensus 52 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~v~~~~sGseA~~ 128 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYAS-PWYMATSPAARLAEKIATLTPG--DLNRIFFTTGGSTAVD 128 (476)
T ss_dssp TCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCC-TTTCBCHHHHHHHHHHHTTSST--TCCEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc-cCccCCHHHHHHHHHHHhcCCC--CcCEEEEeCchHHHHH
Confidence 578899999884 55553 8899999999987743333 3257788999999999887763 4579999999999999
Q ss_pred HHHHHhcC-------C-CCeEEEcCCCCCChHHHHHHcCCE-------------EEEec--CCCCCCCcCC--------H
Q 012095 170 QAVLAVCS-------P-GDEVIIPAPFWVSYPEMARIADAT-------------PVILP--TRISENFLLD--------P 218 (471)
Q Consensus 170 ~~~~~l~~-------~-gd~Vlv~~p~y~~~~~~~~~~G~~-------------~~~v~--~~~~~~~~ld--------~ 218 (471)
.+++.+.. + ++.|++.+|+|+++...+...+.. +..++ ..... +..| +
T Consensus 129 ~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~ 207 (476)
T 3i5t_A 129 SALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDDLV 207 (476)
T ss_dssp HHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHHHH
Confidence 99998863 3 578999999999988766554432 22222 21111 1222 7
Q ss_pred HHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc-cCCCCCC
Q 012095 219 KVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA-SLPGMWE 292 (471)
Q Consensus 219 e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~-~~~~~~~ 292 (471)
++|+++++ +++++|+++.++|++|. +++++++++|.++|++| |++||+||+|.++...|.. ..+. .... ..
T Consensus 208 ~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~-gillI~DEv~~g~gr~G~~-~~~~~~~~v-~p 284 (476)
T 3i5t_A 208 QEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH-DILYISDEVVTGFGRCGEW-FASEKVFGV-VP 284 (476)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-CHHHHTTCC-CC
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccccCc-eeeecccCC-Cc
Confidence 88888885 45667777777888885 88999999999999999 9999999999987555432 1122 1111 11
Q ss_pred ceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-------HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 293 RTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI-------QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 293 ~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~-------~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
. +.+|||.++ .| +|+||+++++++++.+... ....+++.+++++.++.++|+.. ++ +.+.+.+
T Consensus 285 d---i~t~sK~l~-~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~---~~--~~~~~~~ 355 (476)
T 3i5t_A 285 D---IITFAKGVT-SGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELM---ER--EGIVDQA 355 (476)
T ss_dssp S---EEEECGGGG-TTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHH---HH--TTHHHHH
T ss_pred c---hhhhhhhhc-CCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHH---Hh--HHHHHHH
Confidence 2 336899998 68 9999999999999988753 23356788999999999999741 11 2344555
Q ss_pred HHHHHHHHHHhcC---CCCCeeeCCCcceEEeEecCCccCCcccCCCC-CCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 365 RERRDFLVKSFGE---LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGK-IENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 365 ~~~r~~l~~~L~~---~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
+++.+++.+.|++ ++.+....+.|.| +++.+...... ...+.. ......+++.|+++ ||.+.|.. +++
T Consensus 356 ~~~~~~l~~~L~~l~~~~~v~~v~~~G~~-~~i~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~g-----~~i 427 (476)
T 3i5t_A 356 REMADYFAAALASLRDLPGVAETRSVGLV-GCVQCLLDPTR-ADGTAEDKAFTLKIDERCFEL-GLIVRPLG-----DLC 427 (476)
T ss_dssp HHHHHHHHHHHHTTTTSTTEEEEEEETTE-EEEEECCC------CCHHHHHHHHHHHHHHHHT-TEECEEET-----TEE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEecCce-eEEEEecCccc-cccccchhHHHHHHHHHHHHC-CCEEEecC-----CEE
Confidence 5555555555554 4455555666665 56666532000 000000 00145788888876 99999842 799
Q ss_pred EEE--eecCHHHHHHHHHHHHHHHHhhC
Q 012095 441 RIS--YAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 441 Ris--~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
||+ +..+++++++++++|+++++++.
T Consensus 428 Ri~p~l~~t~e~i~~~l~~l~~~l~~~~ 455 (476)
T 3i5t_A 428 VISPPLIISRAQIDEMVAIMRQAITEVS 455 (476)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999 55599999999999999987653
No 166
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.97 E-value=5.1e-31 Score=272.47 Aligned_cols=361 Identities=14% Similarity=0.129 Sum_probs=256.5
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCC-C------CCCCCCCHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFT-R------YTPNAGTLELRSA 140 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~-~------Y~~~~G~~~lr~~ 140 (471)
++.++....+..+..+...... + .+.|.|..|++. +|+.+.+++.+.+.+... + |+...+..++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~i~L~a~e~~--~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~ 94 (483)
T 1rv3_A 21 LAQPLKDSDAEVYDIIKKESNR-Q---RVGLELIASENF--ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETL 94 (483)
T ss_dssp TTSCHHHHCHHHHHHHHHHHHH-H---HSSEECCTTCCC--CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHH
T ss_pred HhhhhhhcCHHHHHHHHHHHHH-h---hcCeEEEcCCCC--CCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHH
Confidence 4445555555433333222221 1 357999888763 578899999887765321 2 3333455788888
Q ss_pred HHHHHHHHhCCCCCC--CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH--------HHHHcC--CEEEEecC
Q 012095 141 ICHKLKEENGLSYTP--DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE--------MARIAD--ATPVILPT 208 (471)
Q Consensus 141 ia~~~~~~~g~~~~~--~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~G--~~~~~v~~ 208 (471)
+.+++++.+|.+.+. .+|++++|+ +++..++.++++|||+|++++|.|.++.. .+...| .+++.+++
T Consensus 95 ~~~~~a~~~g~~~~~~~~~V~~~sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~ 173 (483)
T 1rv3_A 95 CQKRALQAYGLDPQCWGVNVQPYSGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV 173 (483)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCSSHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB
T ss_pred HHHHHHHHhCCCcccCceEEEECCcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc
Confidence 999999999965332 358888888 88888899999999999999999887753 234445 56666655
Q ss_pred CCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCcccccc
Q 012095 209 RISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFAS 286 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~ 286 (471)
++ +++.+|+++|+++++ +++|+|++ +++||+ .+++ +++|.++|++| |++||+|++|.. +.+.+....++
T Consensus 174 ~~-~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~d---l~~i~~ia~~~-g~~livD~ah~~g~~~~~~~~~p~-- 244 (483)
T 1rv3_A 174 NP-DTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLD---YGRLRKIADEN-GAYLMADMAHISGLVVAGVVPSPF-- 244 (483)
T ss_dssp CT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHHTSSCCGG--
T ss_pred cc-CCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCC---HHHHHHHHHHc-CCEEEEEccchhcccccCCCCCCC--
Confidence 54 357899999999998 79999999 899988 8888 89999999999 999999999873 33333211111
Q ss_pred CCCCCCceEEEecCCcccCccchhheeeEcCHH---------------HHHHHHHHHhcc-cCCCChHHHHHHHHHHhcc
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH---------------FVAACNKIQSQF-TSGASSISQKAGVAALGLG 350 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~---------------~i~~l~~~~~~~-~~~~~~~~q~aa~~~L~~~ 350 (471)
+ ...+++.|+||++ +|+|.||++++++ +.+.+....... ..+++...+.+...++...
T Consensus 245 -~---~~div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~ 318 (483)
T 1rv3_A 245 -E---HCHVVTTTTHKTL--RGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQA 318 (483)
T ss_dssp -G---TCSEEEEESSGGG--CCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH
T ss_pred -C---CCcEEEecCcccC--CCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHH
Confidence 1 2348899999987 6889999999874 344444332222 2234444445555566542
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC-cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE
Q 012095 351 YAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ-GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV 429 (471)
Q Consensus 351 ~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~ 429 (471)
...++++..+++.++++++.+.|.++ |+++..+. +++++|++++.. + .+..++.+.| ++.||.+.
T Consensus 319 --~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~-g---------~~~~~~~~~L-~~~gI~v~ 384 (483)
T 1rv3_A 319 --MTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSK-G---------TDGGRAEKVL-EACSIACN 384 (483)
T ss_dssp --TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGG-T---------CCHHHHHHHH-HHTTEECE
T ss_pred --hChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCC-C---------CCHHHHHHHH-HhCCcEEe
Confidence 13567888999999999999999988 89887653 457788888632 1 1566776655 55799999
Q ss_pred ----CCCCCC-CCCcEEEEeec--C----HHHHHHHHHHHHHHHHh
Q 012095 430 ----PGDAFG-DDTCIRISYAA--S----LTTLQAAVERIKKGLLT 464 (471)
Q Consensus 430 ----pg~~f~-~~~~iRis~~~--~----~e~i~~~~~~l~~~l~~ 464 (471)
||..+. .++++||+++. + ++++++++++|.++++.
T Consensus 385 ~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 385 KNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp EECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 887321 35799999986 5 89999999999998875
No 167
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=1.4e-30 Score=262.79 Aligned_cols=337 Identities=14% Similarity=0.108 Sum_probs=240.7
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcC-CCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREG-FTRYTP------NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQS 167 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~-~~~Y~~------~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~a 167 (471)
..+++++.+.| + |+.+.+++.+++.+. ..+|+. .....++++.+.+.+.+.+|. +++.+++++| +++
T Consensus 24 ~~~~~~~~~~~-~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~--~~~~i~~~sG-t~a 97 (405)
T 2vi8_A 24 AKIELIASENF-V--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGA--EHANVQPHSG-AQA 97 (405)
T ss_dssp HSEECCTTCCC-C--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHH
T ss_pred cceeeccCccc-C--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCC--CceEEEecCc-HHH
Confidence 34666655543 3 888999998877532 222221 122345665555666666774 3444555666 999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHH-H--HHHcC--CEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCc
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE-M--ARIAD--ATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPT 241 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~-~--~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPt 241 (471)
+..++++++++||.|++++|+|..+.. . +...| .+++.+++++ .++.+|++++++++++ ++++|++ +|+|.
T Consensus 98 ~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~- 174 (405)
T 2vi8_A 98 NMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIVA-AAAAY- 174 (405)
T ss_dssp HHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-
T ss_pred HHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-
Confidence 999999999999999999999988753 1 12334 4888888753 3577999999999986 8898877 55553
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC-ccchhheeeEcCHHH
Q 012095 242 GSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA-MTGWRLGYIAGPKHF 320 (471)
Q Consensus 242 G~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g-~~G~R~G~v~~~~~~ 320 (471)
|...+ +++|.++|++| |++||+||+|........... ..+. ...+++.||||.++ +.| ||+++++++
T Consensus 175 ~~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~--~~~~---~~di~~~s~sK~~~g~~g---G~~~~~~~~ 242 (405)
T 2vi8_A 175 PRIID---FAKFREIADEV-GAYLMVDMAHIAGLVAAGLHP--NPVP---YAHFVTTTTHKTLRGPRG---GMILCQEQF 242 (405)
T ss_dssp CSCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSC--CSTT---TCSEEEEESSSTTCCCSC---EEEEECHHH
T ss_pred CccCC---HHHHHHHHHHc-CCEEEEEccccccccccCcCC--Cccc---cCCEEEEeccccCCCCCC---eEEEEcHHH
Confidence 45556 89999999999 999999999995433211111 1121 22388999999996 666 999999999
Q ss_pred HHHHHHHHhcccCCCChHHH-HHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-CcceEEeEecCC
Q 012095 321 VAACNKIQSQFTSGASSISQ-KAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFST 398 (471)
Q Consensus 321 i~~l~~~~~~~~~~~~~~~q-~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~~g~~~~~~~~~ 398 (471)
++.+......+..+.+.+.+ .++.++++.. ...++++++++++++++++.+.|+++ |+++..| .+++++|+.++.
T Consensus 243 ~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 319 (405)
T 2vi8_A 243 AKQIDKAIFPGIQGGPLMHVIAAKAVAFGEA--LQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRP 319 (405)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG
T ss_pred HHHHHhhhcccccCCCCHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccC
Confidence 99888776555544433444 4445666531 12578899999999999999999988 8888765 457888999864
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC----CC--CCCcEEEEeec------CHHHHHHHHHHHHHHHHhhC
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA----FG--DDTCIRISYAA------SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~----f~--~~~~iRis~~~------~~e~i~~~~~~l~~~l~~~~ 466 (471)
. + .+..++.+.|.+ +||.+.+|.. ++ .++++|++++. +++++++++++|++++++..
T Consensus 320 ~-~---------~~~~~~~~~l~~-~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 320 Q-Q---------LTGKTAEKVLDE-VGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp G-T---------CCHHHHHHHHHH-HTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred C-C---------CCHHHHHHHHHH-cCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 2 0 156788887765 5999999862 22 34689999984 79999999999999987654
No 168
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=3.1e-30 Score=261.33 Aligned_cols=335 Identities=12% Similarity=0.059 Sum_probs=235.6
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCC------CCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRY------TPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
+.|+|..+++.. ++.+++++.+.+.+.. .+| +......++++.+.+.+.+.+|. ++++|++++| ++++
T Consensus 26 ~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~--~~~~i~~~sG-t~a~ 100 (417)
T 3n0l_A 26 EGLEMIASENFT--LPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNC--KFANVQPNSG-SQAN 100 (417)
T ss_dssp HSEECCTTCCCC--CHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHH
T ss_pred cCeeeecccCCC--CHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCC--CCcceEeccH-HHHH
Confidence 468888777654 7889999888774322 222 22233456777667777777774 5667888888 7999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCCChHH---HHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcc
Q 012095 169 LQAVLAVCSPGDEVIIPAPFWVSYPE---MARI--ADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTG 242 (471)
Q Consensus 169 ~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG 242 (471)
..++.++++|||+|++++|+|.++.. .+.. .+..++.++++ +++.+|+++|+++++ +++++|++++|+| |
T Consensus 101 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G 176 (417)
T 3n0l_A 101 QGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASAY--A 176 (417)
T ss_dssp HHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSSC--C
T ss_pred HHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCccc--C
Confidence 99999999999999999999987654 3333 34456666665 567799999999998 6899999888886 8
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEEccCCC-ccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHH
Q 012095 243 SVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHF 320 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~ 320 (471)
.+++ +++|.++|++| |++||+||+|. ++.+.+.....+ ....+++.||||.+ +|+|+||++++ +++
T Consensus 177 ~~~~---l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~------~~~di~~~s~sK~l--~g~~~G~~~~~~~~~ 244 (417)
T 3n0l_A 177 RVID---FAKFREIADEI-GAYLFADIAHIAGLVVAGEHPSPF------PYAHVVSSTTHKTL--RGPRGGIIMTNDEEL 244 (417)
T ss_dssp SCCC---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCCT------TTCSEEEEESSTTT--CSCSCEEEEESCHHH
T ss_pred ccCC---HHHHHHHHHHc-CCEEEEECccchhhhhcccCCCcc------ccceEEEeeCcccc--CCCCeeEEEECCHHH
Confidence 8888 89999999999 99999999964 333433211111 13458999999987 78899999998 789
Q ss_pred HHHHHHHHhcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEeEecCC
Q 012095 321 VAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLFIDFST 398 (471)
Q Consensus 321 i~~l~~~~~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~~~~~~ 398 (471)
++.+......... +++...+.++..++... ..+++++.++++.++++++.+.|.+. |+.+.. +..+.++|+.++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 321 (417)
T 3n0l_A 245 AKKINSAIFPGIQGGPLMHVIAAKAVGFKFN--LSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVLMSFLD 321 (417)
T ss_dssp HHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTT
T ss_pred HHHHhhhhCCcccCCcHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEEEEccc
Confidence 9988876554433 33444444545555431 13567888889999999999999884 887764 2445668888753
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCC------CCcEEEEeec------CHHHHHHHHHHHHHHHHhh
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGD------DTCIRISYAA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~------~~~iRis~~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
. + .+...+.+.|. ++||.+.++..+.. .+.+|+++.. +++++++++++|++++++.
T Consensus 322 ~-~---------~~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 322 R-E---------FSGKDADLALG-NAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp S-S---------SCHHHHHHHHH-HTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred C-C---------CCHHHHHHHHH-HcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 2 1 15666666554 56999987654322 3569999863 5799999999999998764
No 169
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=4.9e-31 Score=268.79 Aligned_cols=347 Identities=12% Similarity=0.093 Sum_probs=233.5
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+||++.|. +.++. |+.+.+++.+++.+....|.+.....+|++.+++++ + ..++|++|+|+++++.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~---~~~~v~~~~~Gsea~~ 123 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSFGAPTEIENKLAKLVIERV----P---SIEIVRMVNSGTEATM 123 (429)
T ss_dssp TCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCCSSCCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCcCCCCHHHHHHHHHHHHhC----C---CCCEEEEeCChHHHHH
Confidence 578899999887 44553 899999999998875444446555566666666653 3 4689999999999999
Q ss_pred HHHHHhcC--CCCeEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCc------------CCHHHHHhhhcc---CCcE
Q 012095 170 QAVLAVCS--PGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFL------------LDPKVLESKLTE---KSRL 231 (471)
Q Consensus 170 ~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~------------ld~e~l~~~l~~---~~~~ 231 (471)
.+++.+.. +++.|++.+|+|+++...+.. .|.....++.....++. -|++++++++++ ++++
T Consensus 124 ~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~ 203 (429)
T 3k28_A 124 SALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIAC 203 (429)
T ss_dssp HHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEE
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEE
Confidence 99987754 568999999999876543322 22211111111111110 189999998863 4455
Q ss_pred EEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchh
Q 012095 232 LILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWR 310 (471)
Q Consensus 232 i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 310 (471)
|+++.++|++|... +++++++|.++|++| |++||+||+|.++ ..+... ...... ....+.||||.++ .|+|
T Consensus 204 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~~~-~~~~~~----~~~di~t~sK~~~-~G~~ 275 (429)
T 3k28_A 204 VIVEPVAGNMGVVPPQPGFLEGLREVTEQN-GALLIFDEVMTGF-RVAYNC-GQGYYG----VTPDLTCLGKVIG-GGLP 275 (429)
T ss_dssp EEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTT-TSSTTH-HHHHHT----CCCSEEEECGGGG-TTSC
T ss_pred EEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCcch-HHHHhC----CCCceehhhhhhc-CCCC
Confidence 55544455666544 688899999999999 9999999999987 444211 111111 1112457999998 6999
Q ss_pred heeeEcCHHHHHHHHHHH---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CCCee
Q 012095 311 LGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EGVKM 383 (471)
Q Consensus 311 ~G~v~~~~~~i~~l~~~~---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g~~~ 383 (471)
+||+++++++++.+.... ...+++.+++++.++.++|+.. + ++++++++++++++.+.|.++ +.+..
T Consensus 276 iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~---~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 349 (429)
T 3k28_A 276 VGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQL---T---PESYVEFERKAEMLEAGLRKAAEKHGIPHH 349 (429)
T ss_dssp CEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTC---C---HHHHHHHHHHHHHHHHHHHHHHHHTTCCCE
T ss_pred eEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHH---H---HHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence 999999999998875432 2345678999999999999862 2 456666777777777766653 33444
Q ss_pred eCCCcceEEeEecCCccCCcc--cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHH
Q 012095 384 SEPQGAFYLFIDFSTYYGSEA--EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKG 461 (471)
Q Consensus 384 ~~p~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~ 461 (471)
.++.|.| +++.+........ ..........++++.|+++ ||.+.|+. .+++|+++..+++++++++++|+++
T Consensus 350 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~----~~~~r~~~~~t~e~i~~~l~~l~~~ 423 (429)
T 3k28_A 350 INRAGSM-IGIFFTDEPVINYDAAKSSNLQFFAAYYREMVEQ-GVFLPPSQ----FEGLFLSTVHSDADIEATIAAAEIA 423 (429)
T ss_dssp EEEETTE-EEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSST----TSCBCCCTTCCHHHHHHHHHHHHHH
T ss_pred EEeeccE-EEEEEecCCcccccccccccHHHHHHHHHHHHHC-CeEEecCC----CCCEEEECCCCHHHHHHHHHHHHHH
Confidence 4455555 5555532100000 0000000236788888876 99999974 3578999888999999999999999
Q ss_pred HHhhC
Q 012095 462 LLTLR 466 (471)
Q Consensus 462 l~~~~ 466 (471)
+++++
T Consensus 424 l~~~~ 428 (429)
T 3k28_A 424 MSKLK 428 (429)
T ss_dssp HHTCC
T ss_pred HHHHh
Confidence 98764
No 170
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.97 E-value=2.7e-30 Score=261.87 Aligned_cols=334 Identities=15% Similarity=0.068 Sum_probs=225.7
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC-------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF-------TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-------~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.+.+..+.+. .|+.+.+++.+++.+.. ..|+.......+.+...+++.+.+|. ++++|++++| ++++.
T Consensus 32 ~~~~~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~--~~~~v~~~sG-s~a~~ 106 (420)
T 3gbx_A 32 HIELIASENY--TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA--DYANVQPHSG-SQANF 106 (420)
T ss_dssp SEECCTTCCC--CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC--SEEECCCSSH-HHHHH
T ss_pred ceeeeccCCC--CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC--CCceeEecCc-HHHHH
Confidence 5666666544 58889999988774422 12222233445555555777777774 5567767766 77999
Q ss_pred HHHHHhcCCCCeEEEcCCCCCChH---HHHHH--cCCEEEEecCCCCCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCccc
Q 012095 170 QAVLAVCSPGDEVIIPAPFWVSYP---EMARI--ADATPVILPTRISENFLLDPKVLESKLTE-KSRLLILCSPSNPTGS 243 (471)
Q Consensus 170 ~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~--~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~ 243 (471)
.++++++++||+|+++.|+|.++. ..... .+...+.++.+ .++.+|+++|++++++ ++++|++++|+||+
T Consensus 107 ~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~-- 182 (420)
T 3gbx_A 107 AVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG-- 182 (420)
T ss_dssp HHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--
T ss_pred HHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--
Confidence 999999999999999999998743 22222 33455566554 4567999999999976 69999999999974
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH---HH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---HF 320 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~---~~ 320 (471)
..+ +++|.++|++| |++||+||+|....+........ + ....+++.||||.++ |.|.||+++++ ++
T Consensus 183 ~~~---l~~l~~l~~~~-~~~li~De~~~~~~~~~~~~~~~--~---~~~di~~~s~sK~~~--g~~gg~~~~~~~~~~~ 251 (420)
T 3gbx_A 183 VVD---WAKMREIADSI-GAYLFVDMAHVAGLIAAGVYPNP--V---PHAHVVTTTTHKTLA--GPRGGLILAKGGDEEL 251 (420)
T ss_dssp CCC---HHHHHHHHHHT-TCEEEEECTTTHHHHHTTSSCCS--T---TTSSEEEEESSGGGC--SCSCEEEEESSCCHHH
T ss_pred ccC---HHHHHHHHHHc-CCEEEEECCcchhceecccCCcc--c---ccCCEEEeecccCCC--CCCceEEEEcCCcHHH
Confidence 666 88999999999 99999999986443322111111 1 124489999999984 55569999987 78
Q ss_pred HHHHHHHHhcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-CcceEEeEecCC
Q 012095 321 VAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QGAFYLFIDFST 398 (471)
Q Consensus 321 i~~l~~~~~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~~g~~~~~~~~~ 398 (471)
.+.+......... +++...+.++..++... ..+++++++++++++++++.+.|.+. |+++..+ ..++++|+.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 328 (420)
T 3gbx_A 252 YKKLNSAVFPSAQGGPLMHVIAGKAVALKEA--MEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVD 328 (420)
T ss_dssp HHHHHHHHC----CCCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGG
T ss_pred HHHhhhhcCCCCCCCcchhHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCC
Confidence 8877765443322 34444444544455431 24677889999999999999999885 8887653 456678888764
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC-------CCCCCCCCcEEEEeec------CHHHHHHHHHHHHHHHHhh
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVP-------GDAFGDDTCIRISYAA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p-------g~~f~~~~~iRis~~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
.. .+...+.+.| +++||.+.| |..|+. +.+||++.. ++++++++++.|++++++.
T Consensus 329 ~~----------~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~-~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 329 KN----------LTGKEADAAL-GRANITVNKNSVPNDPKSPFVT-SGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp GT----------CCHHHHHHHH-HHTTEECEEECCTTCSSCTTTC-SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred CC----------CCHHHHHHHH-HHCCcEeccccCCCCccccCCC-cceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 21 1456666655 456999998 444443 459999874 4789999999999998764
No 171
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=4.2e-30 Score=256.68 Aligned_cols=323 Identities=15% Similarity=0.221 Sum_probs=237.8
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLA 174 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~ 174 (471)
.++++|+.|.|++. + +.+++.+.+..+ .|++..+..++++.+++++. .+++++++|+++++..++++
T Consensus 6 ~~~~~l~~~~~~~~--~-~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~~~~~ 72 (374)
T 3uwc_A 6 VPYSYLERQFADIE--P-YLNDLREFIKTA--DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDALAMSFKM 72 (374)
T ss_dssp BCSCCHHHHTSSCH--H-HHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHHHHHHHH
T ss_pred ceeeccccCCCCch--H-HHHHHHHHHHcC--CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHH
Confidence 45778888887764 3 888888887663 57788889999999999862 24889999999999999999
Q ss_pred h-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 175 V-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 175 l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+ +++||+|+++.|+|+++...++..|++++.++++ .++.+|++++++++++++++|+ |+||||...+ +++|
T Consensus 73 ~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~---~~~i 144 (374)
T 3uwc_A 73 LNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD---MPAL 144 (374)
T ss_dssp TTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHH
T ss_pred cCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC---HHHH
Confidence 9 9999999999999999999999999999999987 4577999999999988888777 8999999998 8899
Q ss_pred HHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcC-HHHHHHHHHHHh
Q 012095 254 ARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQS 329 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~-~~~i~~l~~~~~ 329 (471)
.++|++| ++++|+||+|..+. +++. ....+ ..+++.||| |.++.+|. .||++++ +++++.+.....
T Consensus 145 ~~~~~~~-~~~li~D~~~~~g~~~~~~---~~~~~-----~d~~~~s~~~~K~l~~~g~-~g~~~~~~~~~~~~~~~~~~ 214 (374)
T 3uwc_A 145 AKIAKKH-NLHIVEDACQTILGRINDK---FVGSW-----GQFACFSLHPLKNLNVWSD-AGVIITHSDEYAEKLRLYRN 214 (374)
T ss_dssp HHHHHHT-TCEEEEECTTCTTCEETTE---ETTSS-----SSEEEEECSSSSSSCCSSC-CEEEEESCHHHHHHHHHHTB
T ss_pred HHHHHHc-CCEEEEeCCCccCceeCCe---ecccc-----ccEEEEeCCCCCcCCccce-eEEEEeCCHHHHHHHHHHHh
Confidence 9999999 99999999998643 2221 11111 247788877 99974364 8888875 567777776543
Q ss_pred c------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeC-CCcceEEeEe
Q 012095 330 Q------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG-VKMSE-PQGAFYLFID 395 (471)
Q Consensus 330 ~------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g-~~~~~-p~~g~~~~~~ 395 (471)
. .+...+.+...+.... .+.+++..++.+++++++.+.|.++++ +.+.. +.++...|..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~aa~~~~~-------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (374)
T 3uwc_A 215 HGLINRDVCVEYGINCRMDTIQAVIANRL-------MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHI 287 (374)
T ss_dssp TTEEETTEESSCCCBCBCCHHHHHHHHHH-------GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSS
T ss_pred cCccccCccccccccCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEE
Confidence 1 1112233333222222 233566777778888899999998866 66532 2322222211
Q ss_pred cCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-------------C----------CCcEEEEeec--CHHH
Q 012095 396 FSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-------------D----------DTCIRISYAA--SLTT 450 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-------------~----------~~~iRis~~~--~~e~ 450 (471)
++-.. .+..++.+.|.++ ||.+.+|.... . .+.+|+++.. ++++
T Consensus 288 ~~~~~----------~~~~~l~~~L~~~-gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~ed 356 (374)
T 3uwc_A 288 YVLRV----------KYRDQLFQYLKDN-GIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLTEEE 356 (374)
T ss_dssp EEEEE----------TTHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSCHHH
T ss_pred EEEEc----------CCHHHHHHHHHHC-CCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCCHHH
Confidence 11000 1567888888766 99999886110 0 1579999886 8999
Q ss_pred HHHHHHHHHHHHHhhC
Q 012095 451 LQAAVERIKKGLLTLR 466 (471)
Q Consensus 451 i~~~~~~l~~~l~~~~ 466 (471)
++++++.|++++++.+
T Consensus 357 i~~~~~~l~~~l~~~~ 372 (374)
T 3uwc_A 357 INYIIKKVREFYLEKH 372 (374)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998754
No 172
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=3.1e-30 Score=260.24 Aligned_cols=322 Identities=12% Similarity=0.030 Sum_probs=228.8
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE-eCChHHHHHHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIRE--GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQAV 172 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i-t~G~~~al~~~~ 172 (471)
.+++++.|. .++|+.+++++.+.... +..++++ ...++.+.+.+.+++.+|.+ .+++|++ |+|+++++..++
T Consensus 40 ~~~~~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~al~~~~ 114 (398)
T 2fyf_A 40 RDGRFGSGP--SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAFWDAAA 114 (398)
T ss_dssp SSCBCCSSS--CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHHHHHHH
T ss_pred CCccccCCC--CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHHHHHHH
Confidence 456666553 34677888888763111 1112322 22456667777777777864 4579998 999999999999
Q ss_pred HHhcCCC-CeEEEcCCCCCC-hHHHHHHc--CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHH
Q 012095 173 LAVCSPG-DEVIIPAPFWVS-YPEMARIA--DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKN 248 (471)
Q Consensus 173 ~~l~~~g-d~Vlv~~p~y~~-~~~~~~~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~ 248 (471)
++++++| +.| ..+.|.. ....+... |++++.++++ .++..+. .+++++++|++++|+||||.+++.+
T Consensus 115 ~~l~~~gv~~v--~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~~~~ 185 (398)
T 2fyf_A 115 FGLIDKRSLHL--TYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGVAVAVR 185 (398)
T ss_dssp HHTCSSCEEEE--ECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTEECCCC
T ss_pred HHhcCCCeEEE--eCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcceecchH
Confidence 9999887 433 2333311 12245555 8888889886 3333332 2567899999999999999999955
Q ss_pred HHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH
Q 012095 249 LLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ 328 (471)
Q Consensus 249 ~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~ 328 (471)
++.+ + + +++||+|++|..+.. ...+ . +..+++.|+||.+|++| ++||+++++++++.+.+..
T Consensus 186 ~i~~---~---~-~~~vivD~a~~~~~~----~~~~---~---~~di~~~s~sK~~~~~g-g~g~l~~~~~~~~~l~~~~ 247 (398)
T 2fyf_A 186 RPEG---S---D-DALVVIDATSGAGGL----PVDI---A---ETDAYYFAPQKNFASDG-GLWLAIMSPAALSRIEAIA 247 (398)
T ss_dssp CCTT---C---C--CEEEEECTTTTTTS----CCCG---G---GCSEEEECTTSTTCSCS-SEEEEEECHHHHHHHHHHH
T ss_pred Hhhh---h---c-CCeEEEEeccccCCc----ccCc---c---cCcEEEEecCcccCCCC-ceEEEEECHHHHHHhhccc
Confidence 5544 3 7 899999999986432 1111 1 23488999999999775 6999999999988875431
Q ss_pred ---------------------hcccCCCChHHHHHHHHHHhccCCChHH--HHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 329 ---------------------SQFTSGASSISQKAGVAALGLGYAGGEV--VSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 329 ---------------------~~~~~~~~~~~q~aa~~~L~~~~~~~~~--~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
.....+++...+.++.++|+. ..+. +++.+++++++++++.+.|++++|+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~---~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 324 (398)
T 2fyf_A 248 ATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDW---LVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFV 324 (398)
T ss_dssp HTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHH---HHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESC
T ss_pred ccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHcCCceecc
Confidence 112235677777777777764 2333 78889999999999999999888888763
Q ss_pred --C--CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 386 --P--QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 386 --p--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
| .+++++|++++.. .+..++.+.|.++ ||.+.+|..+..++++||+++. +++++++++++|+
T Consensus 325 ~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l~ 392 (398)
T 2fyf_A 325 TDPGLRSQVVGTIDFVDD-----------VDAGTVAKILRAN-GIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECVD 392 (398)
T ss_dssp CSGGGBCSSEEEEEECTT-----------SCHHHHHHHHHHT-TCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CChhhcCCcEEEEECCCC-----------CCHHHHHHHHHHC-CcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHHH
Confidence 4 3566889998643 2678899998877 9999987433235799999995 8999999999999
Q ss_pred HHHHh
Q 012095 460 KGLLT 464 (471)
Q Consensus 460 ~~l~~ 464 (471)
+++++
T Consensus 393 ~~l~~ 397 (398)
T 2fyf_A 393 WVVER 397 (398)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98865
No 173
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=1.2e-29 Score=257.52 Aligned_cols=360 Identities=14% Similarity=0.104 Sum_probs=233.7
Q ss_pred ccccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCC-----CCCCCCHHHHHHH
Q 012095 68 LSPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRY-----TPNAGTLELRSAI 141 (471)
Q Consensus 68 ~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y-----~~~~G~~~lr~~i 141 (471)
+++++..+.++....+.+..... .+.++|..+++.. |+.+.+++.+++.+.. .+| .+.....++.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (425)
T 3ecd_A 9 FSQSLAERDASVRGAILKELERQ----QSQVELIASENIV--SRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEAL 82 (425)
T ss_dssp HHCCHHHHCHHHHHHHHHHHHHH----HHSEECCTTCCCC--CHHHHHHHTSGGGSSCTTC------------CCHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHH----hcceeeecccCCC--CHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHH
Confidence 45566777666444433322221 2468888887655 8889999988774321 122 1111222244444
Q ss_pred H-HHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC---hHHHHHHcCC--EEEEecCCCCCCCc
Q 012095 142 C-HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS---YPEMARIADA--TPVILPTRISENFL 215 (471)
Q Consensus 142 a-~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~~~~~~~G~--~~~~v~~~~~~~~~ 215 (471)
+ +++.+.+|. + ...++++|+++++..++++++++||+|++++|+|.+ +.......|. +++.++.++ +++.
T Consensus 83 a~~~~~~~~~~--~-~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 158 (425)
T 3ecd_A 83 AIERVKRLFNA--G-HANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTML 158 (425)
T ss_dssp HHHHHHHHHTC--S-EEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSS
T ss_pred HHHHHHHHhCC--C-CceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCc
Confidence 4 666666663 2 233458888899999999999999999999999988 3333334455 556666653 4578
Q ss_pred CCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCc
Q 012095 216 LDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWER 293 (471)
Q Consensus 216 ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~ 293 (471)
+|+++|+++++ +++++|++++|+||+ ..+ +++|.++|++| |++||+||+|.. +.+.+.. ..... ..
T Consensus 159 ~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~i~~l~~~~-~~~li~De~~~~g~~~~~~~-~~~~~-----~~ 226 (425)
T 3ecd_A 159 IDYDQVEALAQQHKPSLIIAGFSAYPR--KLD---FARFRAIADSV-GAKLMVDMAHIAGVIAAGRH-ANPVE-----HA 226 (425)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSCCCS--CCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTTSS-CCGGG-----TC
T ss_pred cCHHHHHHHHhhcCCcEEEEccccCCC--cCC---HHHHHHHHHHc-CCEEEEECcChHhhhhcccc-cCchh-----cC
Confidence 99999999996 589999999999964 455 78999999999 999999999643 3333321 11111 12
Q ss_pred eEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHH
Q 012095 294 TLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFL 371 (471)
Q Consensus 294 ~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l 371 (471)
.+++.||||.+ +|+|+||++++ +++.+.+......... +++...+.++..++... ..+++++.+++++++++++
T Consensus 227 di~~~s~sK~l--~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l 302 (425)
T 3ecd_A 227 HVVTSTTHKTL--RGPRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEA--LTDDFKTYIDRVLANAQAL 302 (425)
T ss_dssp SEEEEESSGGG--CCCSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHH--TSHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCCccc--CCCCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHH
Confidence 38899999997 67899999998 5677777665433322 34444444444444321 2467788899999999999
Q ss_pred HHHhcCCCCCeeeCC-CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE----CCCCCC--CCCcEEEEe
Q 012095 372 VKSFGELEGVKMSEP-QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PGDAFG--DDTCIRISY 444 (471)
Q Consensus 372 ~~~L~~~~g~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~----pg~~f~--~~~~iRis~ 444 (471)
.+.|.+. |+++..+ .+++++|+.++... .+...+.+.| +++||.+. ||..+. .++++|+++
T Consensus 303 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l-~~~gi~v~~~~~p~~~~~~~~~~~iRi~~ 370 (425)
T 3ecd_A 303 GDVLKAG-GVDLVTGGTDNHLLLVDLRPKG----------LKGAQVEQAL-ERAGITCNKNGIPFDPEKPTITSGIRLGT 370 (425)
T ss_dssp HHHHHHT-TCEEGGGSCSSSEEEEECGGGT----------CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEES
T ss_pred HHHHHhC-CCeeccCCCCceEEEEEeCCCC----------CCHHHHHHHH-HHcCCEecccccCCCCCCCCCccceeccc
Confidence 9999886 8887654 46777888876421 1456666665 45599999 543222 246899985
Q ss_pred ec------CHHHHHHHHHHHHHHHHhh
Q 012095 445 AA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 445 ~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
.. ++++++++++.|++++++.
T Consensus 371 ~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 371 PAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 53 4799999999999998765
No 174
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=3e-29 Score=250.28 Aligned_cols=311 Identities=15% Similarity=0.146 Sum_probs=234.0
Q ss_pred ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh---cCCCCeEEEc
Q 012095 109 TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV---CSPGDEVIIP 185 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l---~~~gd~Vlv~ 185 (471)
+|+.+.+++.+.+..+ .|.+..+..++++.+++++ |. +++++|+|+++++..+++++ +++||+|+++
T Consensus 11 ~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~----~~----~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 11 LDKEDKKAVLEVLNSK--QLTQGKRSLLFEEALCEFL----GV----KHALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp CCHHHHHHHHHHHTSS--CCSSSHHHHHHHHHHHHHH----TC----SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred CCHHHHHHHHHHHHcC--cccCChHHHHHHHHHHHHh----CC----CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 5788999999988653 3445566788888888886 32 28999999999999999999 8999999999
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
+|+|+++...++..|++++.++++.++ .+|++++++++++++++|++++| ||.+.+ +++|.++|++| +++|
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~-~~~l 151 (375)
T 2fnu_A 81 PISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKH-SLSF 151 (375)
T ss_dssp SSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHH-TCEE
T ss_pred CCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHc-CCEE
Confidence 999999999999999999999987543 68999999999888998888776 999999 88999999999 9999
Q ss_pred EEccCCCccccCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEc-C-HHHHHHHHHHHhccc---------
Q 012095 266 LSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAG-P-KHFVAACNKIQSQFT--------- 332 (471)
Q Consensus 266 i~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~-~-~~~i~~l~~~~~~~~--------- 332 (471)
|+||+|..+..... ..+.. .+ .+.+.||| |.+|. | +|++++ + +++++.+........
T Consensus 152 i~D~a~~~~~~~~~-----~~~~~-~~-~i~~~s~s~~K~~~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (375)
T 2fnu_A 152 LSDSSHALGSEYQN-----KKVGG-FA-LASVFSFHAIKPITT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGE 221 (375)
T ss_dssp EEECTTCTTCEETT-----EETTS-SS-SEEEEECCTTSSSCC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEE
T ss_pred EEECccccCCeECC-----eeccc-cC-CeEEEeCCCCCCccc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccc
Confidence 99999986432211 11211 12 38888999 99974 6 788887 4 778888876542111
Q ss_pred -------CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC----Cc-ceEEeEecCCcc
Q 012095 333 -------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QG-AFYLFIDFSTYY 400 (471)
Q Consensus 333 -------~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----~~-g~~~~~~~~~~~ 400 (471)
+..+.+...++... .+++++..++++++++++.+.|++++|+++..+ .+ ++++|+.++..
T Consensus 222 ~~~~~~~~~~~~~~~a~~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (375)
T 2fnu_A 222 VKSIGHNFRLNEIQSALGLSQ-------LKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK- 293 (375)
T ss_dssp ESSCCCBCCCCHHHHHHHHHH-------HTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGG-
T ss_pred cccccccCCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcc-
Confidence 12333333222222 234667888889999999999999888887655 23 34457777631
Q ss_pred CCcccCCCCCC-CHHHHHHHHHHcCCEEEECCCC-------CC-------C-------CCcEEEEeec--CHHHHHHHHH
Q 012095 401 GSEAEGFGKIE-NSESLCRYLLDKAQVALVPGDA-------FG-------D-------DTCIRISYAA--SLTTLQAAVE 456 (471)
Q Consensus 401 ~~~~~~~~~~~-~~~~l~~~Ll~~~gV~v~pg~~-------f~-------~-------~~~iRis~~~--~~e~i~~~~~ 456 (471)
+ . +..++.+.|.++ ||.+..+.. |+ . .+++||+++. ++++++++++
T Consensus 294 ~---------~~~~~~l~~~L~~~-gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~ 363 (375)
T 2fnu_A 294 F---------FTCKKLILESLHKR-GILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAH 363 (375)
T ss_dssp G---------GGGHHHHHHHHHHT-TEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHH
T ss_pred c---------cchHHHHHHHHHHC-CCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHH
Confidence 0 1 456788888665 999884221 11 1 1579999996 8999999999
Q ss_pred HHHHHHHhhC
Q 012095 457 RIKKGLLTLR 466 (471)
Q Consensus 457 ~l~~~l~~~~ 466 (471)
+|++++++++
T Consensus 364 ~l~~~~~~~~ 373 (375)
T 2fnu_A 364 SVLKTFESFK 373 (375)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999988765
No 175
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.97 E-value=3.2e-30 Score=262.56 Aligned_cols=343 Identities=14% Similarity=0.129 Sum_probs=229.3
Q ss_pred cCCCeEEcCCCCC--CCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+++||++.|.+ .++. |+.+.+++.+++.+.. .|+. ..+++.++++++.+.++ .+++|++++|+++++.
T Consensus 50 ~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea~~ 122 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT-SFGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEACM 122 (427)
T ss_dssp TSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCS-CCSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCC-CcCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 5778999999873 4443 8899999999887643 3432 45778888888887776 5789999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-CC-------------------EEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-DA-------------------TPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G~-------------------~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
.+++... ..++.|++.+|+|+++...+... |. .++.++.+ |+++|++++++
T Consensus 123 ~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~ 195 (427)
T 3fq8_A 123 AVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAE 195 (427)
T ss_dssp HHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHh
Confidence 9885432 23478999999998755332222 11 12223221 89999999875
Q ss_pred ---CCcEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcc
Q 012095 228 ---KSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKA 303 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 303 (471)
++++|+++.++|++|.+.+ ++++++|.++|++| |++||+||+|.++ ..+.. ....... ....+.||||.
T Consensus 196 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~~-~~~~~~~----~~~di~t~sK~ 268 (427)
T 3fq8_A 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEH-DALLVFDEVITGF-RIAYG-GVQEKFG----VTPDLTTLGKI 268 (427)
T ss_dssp STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTBT-TTBTT-HHHHHTT----CCCSEEEECGG
T ss_pred CCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCcc-hhhHhcC----CCCChhhhhhh
Confidence 5566666666778886665 66699999999999 9999999999987 44321 1111111 11125689999
Q ss_pred cCccchhheeeEcCHHHHHHHHHHH---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 304 FAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 304 ~g~~G~R~G~v~~~~~~i~~l~~~~---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
++ +|+|+||+++++++++.+.... ...+++.+++++.++.++|+.... +++.++.++..+..++.+.+.+.++ +
T Consensus 269 ~~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-~ 345 (427)
T 3fq8_A 269 IG-GGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQ-PGTYEYLDQITKRLSDGLLAIAQET-G 345 (427)
T ss_dssp GG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred hh-CCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 98 8999999999999998876432 234556799999999998874221 3333443333333344444433333 3
Q ss_pred CeeeCCCcceEEeEecCCccCCc--ccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHH
Q 012095 381 VKMSEPQGAFYLFIDFSTYYGSE--AEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERI 458 (471)
Q Consensus 381 ~~~~~p~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l 458 (471)
+....+..|+++|+.++...... ...........++++.|+++ ||.+.|+.. ..+|+++..+++++++++++|
T Consensus 346 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~l 420 (427)
T 3fq8_A 346 HAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ-GIYLAPSQF----EAGFTSLAHTEEDIDATLAAA 420 (427)
T ss_dssp CCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT----SCEECCTTCCHHHHHHHHHHH
T ss_pred CCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC-CcEEecCCC----CCEEeeCcCCHHHHHHHHHHH
Confidence 33223445667888876421000 00000000135788888876 999999763 356777777999999999999
Q ss_pred HHHHHh
Q 012095 459 KKGLLT 464 (471)
Q Consensus 459 ~~~l~~ 464 (471)
++++++
T Consensus 421 ~~~l~~ 426 (427)
T 3fq8_A 421 RTVMSA 426 (427)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999875
No 176
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=2.9e-29 Score=257.42 Aligned_cols=359 Identities=12% Similarity=0.007 Sum_probs=253.2
Q ss_pred HHHHHHHHHH-hcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC---Cc
Q 012095 82 AITDQATALA-QAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP---DQ 157 (471)
Q Consensus 82 ~~~~~~~~~~-~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~ 157 (471)
++.+....+. ..+...+++....+ ..+++.+.+++.+++..+..+|...++..++++.+.+++.+.+|.+.+. ..
T Consensus 27 ~v~~~~~~~~~~~~~~~~~~~~f~~-~~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~ 105 (452)
T 2dgk_A 27 VAFQIINDELYLDGNARQNLATFCQ-TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAV 105 (452)
T ss_dssp HHHHHHHHHGGGSCCCTTBCSCCSC-CCCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCE
T ss_pred HHHHHHHHHhcCCCCCccCCCCeeC-CCchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence 4444444433 34433334444333 2345778888888876655667677788899999999999999965332 24
Q ss_pred EEEeCChHHHHHHHHHHhcC--------CC-----CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 158 ILVSNGAKQSILQAVLAVCS--------PG-----DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~--------~g-----d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
+++|+|+++++..++.++++ +| ++|++++ +|..+...++..|++++.||+++ ++|.+|+++|+++
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~ 183 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEA 183 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHH
Confidence 99999999999999888764 55 5899999 99999999999999999999874 3588999999999
Q ss_pred hccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh------CCCeEEEEccCCCcccc---CCCCccccccCCCCCCceE
Q 012095 225 LTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK------HPRLLVLSDEIYEHIIY---APATHTSFASLPGMWERTL 295 (471)
Q Consensus 225 l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~------~~~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~~i 295 (471)
+++++++|++++|+||||.+.+ +++|.++|++ + ++++++|++|..+.. .+... ..+. ..+-.+
T Consensus 184 i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~-~~~l~vD~a~~~~~~~~~~~~~~---~~~~-~~~~d~ 255 (452)
T 2dgk_A 184 CDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGI-DIDMHIDAASGGFLAPFVAPDIV---WDFR-LPRVKS 255 (452)
T ss_dssp CCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCC-CCCEEEECTTGGGTHHHHCTTCC---CSTT-STTEEE
T ss_pred HhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCC-CCcEEEEcccHHHHHHhhCccch---hhcC-CCCCcE
Confidence 9989999999999999999998 8889999998 5 899999999998653 22111 1111 123445
Q ss_pred EEecCCcccCccchhheeeEcCH-HHH-HHHHHHHhcc---------cCCC---ChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 296 TVNGFSKAFAMTGWRLGYIAGPK-HFV-AACNKIQSQF---------TSGA---SSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 296 ~~~S~SK~~g~~G~R~G~v~~~~-~~i-~~l~~~~~~~---------~~~~---~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
++.|++|. +++|+++||+++++ +++ +.+....... ..+. ..+.+.++...+. .+.++++.
T Consensus 256 ~~~~~hK~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg-----~~g~~~~~ 329 (452)
T 2dgk_A 256 ISASGHKF-GLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLG-----REGYTKVQ 329 (452)
T ss_dssp EEEETTTT-TCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred EEECcccc-cCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHh-----HHHHHHHH
Confidence 77788995 56899999999854 333 4331100100 0111 3344555554443 45678889
Q ss_pred HHHHHHHHHHHHHhcCCCCCeeeCC-----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC---C
Q 012095 362 KAFRERRDFLVKSFGELEGVKMSEP-----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD---A 433 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~g~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~---~ 433 (471)
+++.++++++.+.|++++|+++..| ..++ +.++++.... ...+..++.+.|.++ ||.+.... .
T Consensus 330 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~-v~f~~~~~~~-------~~~~~~~l~~~L~~~-Gi~v~~~~~~~~ 400 (452)
T 2dgk_A 330 NASYQVAAYLADEIAKLGPYEFICTGRPDEGIPA-VCFKLKDGED-------PGYTLYDLSERLRLR-GWQVPAFTLGGE 400 (452)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSE-EEEEECTTCC-------CSCCHHHHHHHHHHT-TCBCCEEECSTT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEE-EEEEecCccc-------ccCCHHHHHHHHHhc-CCeeeeeeCCcc
Confidence 9999999999999999978887643 3444 5556653100 001457899988876 88543211 1
Q ss_pred CCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 434 FGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 434 f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
....+++|++++. ++++++++++.|++++++++
T Consensus 401 ~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 401 ATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLS 435 (452)
T ss_dssp CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1124589999987 78999999999999887653
No 177
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=3.8e-30 Score=264.10 Aligned_cols=336 Identities=13% Similarity=0.120 Sum_probs=220.7
Q ss_pred cCCCeEEcCCCCCC--CC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEPD--FD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+|||+.|.+. ++ .|+.+.+++.+++..+. .| .+..++++++++++.+.++ .+++|++|+|+++++.
T Consensus 55 ~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~-~~---~~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~~ 127 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV-QY---AASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETTL 127 (453)
T ss_dssp TCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC-SS---CSSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHHH
T ss_pred CCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC-CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHHH
Confidence 46779999999733 33 57899999999886632 33 2457899999999988765 5689999999999999
Q ss_pred HHHHH---hcCCCCeEEEcCCCCCChHHHHHH-----------cCCE------EEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMARI-----------ADAT------PVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 170 ~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~-----------~G~~------~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
.++++ +.++ +.|++.+|+|+++...+.. .|.. ++.++. .|+++|++++++
T Consensus 128 ~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~ 199 (453)
T 2cy8_A 128 LALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG 199 (453)
T ss_dssp HHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG
T ss_pred HHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC
Confidence 99887 6654 6788888999876653322 1221 223332 389999998863
Q ss_pred -CCcEEEEcCCCCCcccC-CCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccC
Q 012095 228 -KSRLLILCSPSNPTGSV-YPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFA 305 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 305 (471)
++++|+++..+||||.+ .+++++++|.++|++| |++||+||+|.++ ..+. ...+..... ... +.||||.++
T Consensus 200 ~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~-~~g~-~~~~~~~~~-~~d---i~s~sK~l~ 272 (453)
T 2cy8_A 200 SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQY-GALFILDEVISGF-RVGN-HGMQALLDV-QPD---LTCLAKASA 272 (453)
T ss_dssp GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHT-TCEEEEECTTTTT-TTCT-THHHHHHTC-CCS---EEEEEGGGG
T ss_pred CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecCcccc-ccCc-hhhhHHhCC-CCc---EEEEChhhh
Confidence 55555444445789975 5799999999999999 9999999999977 4332 111111111 111 348999998
Q ss_pred ccchhheeeEcCHHHHHHHHH-----HHhcccCCCChHHHHHHHHHHhc-cCCChHHHHHHHHHHHHHHHHHHHHhcCC-
Q 012095 306 MTGWRLGYIAGPKHFVAACNK-----IQSQFTSGASSISQKAGVAALGL-GYAGGEVVSKMVKAFRERRDFLVKSFGEL- 378 (471)
Q Consensus 306 ~~G~R~G~v~~~~~~i~~l~~-----~~~~~~~~~~~~~q~aa~~~L~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~- 378 (471)
+|+|+||+++++++++.+.. .....+++.+++++.++.++|+. . .+++.++++++++++.+.|+++
T Consensus 273 -~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~------~~~~~~~~~~~~~~l~~~L~~~~ 345 (453)
T 2cy8_A 273 -GGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL------EDDVCAKINDLGQFAREAMNHLF 345 (453)
T ss_dssp -TTSSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH------HTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCcceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh------hhhHHHHHHHHHHHHHHHHHHHH
Confidence 69999999999999887654 12233567899999998888873 2 1234455566666666666543
Q ss_pred --CCCe-eeCCCcceEEeEecCC-----c--c-CCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecC
Q 012095 379 --EGVK-MSEPQGAFYLFIDFST-----Y--Y-GSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAAS 447 (471)
Q Consensus 379 --~g~~-~~~p~~g~~~~~~~~~-----~--~-~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~ 447 (471)
.++. ..++.| .++|+.+++ . . +..........+..++++.|+++ ||.+.|+ +.+|+++..+
T Consensus 346 ~~~~~~~~~~~~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-Gv~v~~~------~~~~l~~~~t 417 (453)
T 2cy8_A 346 ARKGLNWLAYGRF-SGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILE-GVDIGGR------GSVFLSAQHE 417 (453)
T ss_dssp HHTTCCEEEECCT-TEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHT-TEECBTT------TEEECCTTCC
T ss_pred hhCCCcEEEEEee-eEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHC-CeEEeCC------CCEEeeccCC
Confidence 1332 234444 467888864 1 0 00000000000256788888875 9999653 2478887779
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 012095 448 LTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~~~ 465 (471)
++++++++++|+++++++
T Consensus 418 ~~~i~~~l~~l~~~l~~~ 435 (453)
T 2cy8_A 418 REHVEHLVTTFDRVLDRL 435 (453)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999998765
No 178
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.97 E-value=2.5e-30 Score=265.14 Aligned_cols=337 Identities=10% Similarity=0.089 Sum_probs=238.0
Q ss_pred cCCCeEEcCCCC--CCCCC-hHHHH-H-HHHH---HHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCCh
Q 012095 93 AGVSVIRLAAGE--PDFDT-PVLIA-E-AGIN---AIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGA 164 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~~-p~~v~-~-a~~~---~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~ 164 (471)
.|+.++|+..|. .+++. ++.+. + ++.+ ++.+.. .|+ ..+..+.+..+++.+.+.++. ..+++|++|+|+
T Consensus 52 ~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~-~~~-~~~~~~~~~~la~~la~~~~~-~~~~~v~~~~~g 128 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNK-PSN-SDVYSVAMARFVETFARVLGD-PALPHLFFVEGG 128 (449)
T ss_dssp TCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCC-CCT-TTCCCHHHHHHHHHHHHHHCC-TTCCEEEEESSH
T ss_pred CCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcC-CCC-cccCCHHHHHHHHHHHHhcCC-CCCCEEEEeCch
Confidence 467789998776 34553 78899 8 9999 776542 343 234556677777777777762 367899999999
Q ss_pred HHHHHHHHHHhc---C----------C-CCeEEEcCCCCCChHHHHHH-cC--------C-----EEEEecCCCCCCC--
Q 012095 165 KQSILQAVLAVC---S----------P-GDEVIIPAPFWVSYPEMARI-AD--------A-----TPVILPTRISENF-- 214 (471)
Q Consensus 165 ~~al~~~~~~l~---~----------~-gd~Vlv~~p~y~~~~~~~~~-~G--------~-----~~~~v~~~~~~~~-- 214 (471)
++++..+++.+. . + ||.|++.+|+|+++...+.. .| . .++.+|.+.....
T Consensus 129 seA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 208 (449)
T 2cjg_A 129 ALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEP 208 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhcc
Confidence 999999887543 2 2 89999999999986543222 22 1 4566665420011
Q ss_pred ------cCCHHHHHhhhc---cCCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccc
Q 012095 215 ------LLDPKVLESKLT---EKSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (471)
Q Consensus 215 ------~ld~e~l~~~l~---~~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (471)
..++++|+++++ +++++|+++.++|||| .+++++++++|.++|++| |+++|+||+|.++.+.|.. ..+
T Consensus 209 ~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~-~~~ 286 (449)
T 2cjg_A 209 AMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF-DALLIFDEVQTGCGLTGTA-WAY 286 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSS-STH
T ss_pred ccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccccCCCccCcc-eee
Confidence 246677888885 4566666555579999 599999999999999999 9999999999987655431 111
Q ss_pred ccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH-----HHHHhcccCCCChHHHHHHHHHHhccCCChHHHHH
Q 012095 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-----NKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSK 359 (471)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l-----~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~ 359 (471)
..... ... +.||||.+ |+||+++++++++.+ .......+++.++++|.++.++|+. ..+ ++
T Consensus 287 ~~~~~-~~d---i~t~sK~l-----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~---~~~--~~ 352 (449)
T 2cjg_A 287 QQLDV-APD---IVAFGKKT-----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEV---IEA--EG 352 (449)
T ss_dssp HHHTC-CCS---EEEECGGG-----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHH---HHH--HT
T ss_pred cccCC-Cce---EEEecCcc-----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHH---HHh--cc
Confidence 11111 112 34799987 799999999988752 2222335677899999999999874 122 34
Q ss_pred HHHHHHHHHHHHHHHhcC----CCC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 360 MVKAFRERRDFLVKSFGE----LEG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 360 ~~~~~~~~r~~l~~~L~~----~~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
+.++++++++++.+.|++ +++ +....+.|.| ++++++.. .+..++++.|+++ ||.+.|+.
T Consensus 353 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~-~~~~~~~~-----------~~~~~~~~~l~~~-Gv~v~~~g-- 417 (449)
T 2cjg_A 353 LFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM-CAFSLPTT-----------ADRDELIRQLWQR-AVIVLPAG-- 417 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTE-EEEECSSH-----------HHHHHHHHHHHHT-TEECEEET--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEE-EEEEECCh-----------HHHHHHHHHHHHC-CeEEecCC--
Confidence 566777788888887765 344 5555666665 56788642 1356899999875 99999973
Q ss_pred CCCCcEEEEee--cCHHHHHHHHHHHHHHHHhh
Q 012095 435 GDDTCIRISYA--ASLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 435 ~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~ 465 (471)
++++|++++ .+++++++++++|+++++++
T Consensus 418 --~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 418 --ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp --TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 579999765 49999999999999998764
No 179
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.97 E-value=2.7e-29 Score=252.58 Aligned_cols=320 Identities=18% Similarity=0.246 Sum_probs=232.3
Q ss_pred CCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 95 VSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 95 ~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
.++++|..|.|.++ +.+.+++.+.+..+ .|+ +..+..+|++.++++++ .+++++++|+++++..++.
T Consensus 22 ~~~~~l~~~~p~~~--~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~~--------~~~~i~~~~gt~al~~~l~ 89 (391)
T 3dr4_A 22 SDLPRISVAAPRLD--GNERDYVLECMDTT--WISSVGRFIVEFEKAFADYCG--------VKHAIACNNGTTALHLALV 89 (391)
T ss_dssp ------CCCCCCCC--SSHHHHHHHHHHHT--CCSSCSHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHH
T ss_pred CCCceeccCCCCCC--HHHHHHHHHHHHcC--CccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHH
Confidence 35889999998764 67788888877663 454 67788999999999973 2388899999999999999
Q ss_pred Hh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 174 AV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 174 ~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
++ +++||+|++++|+|.++...++..|++++.+++++ +++.+|++++++++++++++|+ |+||||...+ +++
T Consensus 90 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~---~~~ 162 (391)
T 3dr4_A 90 AMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD---MDP 162 (391)
T ss_dssp HHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC---HHH
T ss_pred HcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh---HHH
Confidence 99 89999999999999999999999999999999875 3578999999999988888777 5789999988 889
Q ss_pred HHHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcC-HHHHHHHHHHH
Q 012095 253 IARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQ 328 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~-~~~i~~l~~~~ 328 (471)
|.++|++| +++||+|++|..+. +.+. ....+. .+.+.||| |.+ +|.+.||++++ +++++.+....
T Consensus 163 i~~l~~~~-~~~li~D~a~~~g~~~~~~---~~~~~~-----di~~~S~s~~K~l--~~g~gg~~~~~~~~~~~~~~~~~ 231 (391)
T 3dr4_A 163 ILEVARRH-NLLVIEDAAEAVGATYRGK---KSGSLG-----DCATFSFFGNAII--TTGEGGMITTNDDDLAAKMRLLR 231 (391)
T ss_dssp HHHHHHHT-TCEEEEECTTCTTCEETTE---ETTSSS-----SEEEEECBTTSSS--CCBSCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHc-CCEEEEECcccccceECCe---eecccC-----CEEEEECCCCCcC--CcCCeEEEEECCHHHHHHHHHHH
Confidence 99999999 99999999998633 2221 111111 27788877 666 45678998875 55777777654
Q ss_pred hccc--------------CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC------Cc
Q 012095 329 SQFT--------------SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP------QG 388 (471)
Q Consensus 329 ~~~~--------------~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p------~~ 388 (471)
.... +..+.+...++... ...+++..++.+++++++.+.|.++ |+.+..+ ..
T Consensus 232 ~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~-------~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 303 (391)
T 3dr4_A 232 GQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ-------LERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRH 303 (391)
T ss_dssp BTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCC
T ss_pred hcCCCCCCcccccccccccCCCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcc
Confidence 3211 22333333222222 2335666777788888889999888 8776554 22
Q ss_pred ce-EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC-------C-------------CCCcEEEEeec-
Q 012095 389 AF-YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF-------G-------------DDTCIRISYAA- 446 (471)
Q Consensus 389 g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f-------~-------------~~~~iRis~~~- 446 (471)
++ .+++.++...+ .+..++.+.|.++ ||.+.+|... . ....+|+++..
T Consensus 304 ~~~~~~i~~~~~~~---------~~~~~l~~~L~~~-GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~ 373 (391)
T 3dr4_A 304 VFWMYTVRLGEGLS---------TTRDQVIKDLDAL-GIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAG 373 (391)
T ss_dssp CCSSEEEEECSSCS---------SCHHHHHHHHHHT-TCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTT
T ss_pred eeEEEEEEECCccc---------hhHHHHHHHHHHC-CCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCC
Confidence 32 24666664100 2678899988776 9999987511 0 02469999886
Q ss_pred -CHHHHHHHHHHHHHHH
Q 012095 447 -SLTTLQAAVERIKKGL 462 (471)
Q Consensus 447 -~~e~i~~~~~~l~~~l 462 (471)
++++++++++.|++++
T Consensus 374 ~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 374 LTEADIDRVIAALDQVL 390 (391)
T ss_dssp CCHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 9999999999988653
No 180
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=4.1e-30 Score=262.32 Aligned_cols=339 Identities=16% Similarity=0.155 Sum_probs=231.2
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+|||+.|.+ .++ .++.+.+++.+++.++. .|+ +..++++.+++++.+.++ ..++|++++|+++++.
T Consensus 54 ~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~la~~~~---~~~~v~~~~sgseA~~ 126 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGW-LYG---APGEAEVLLAEKILGYVK---RGGMIRFVNSGTEATM 126 (434)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHHC---TTCEEEEESSHHHHHH
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 5678999998873 344 47899999999987642 221 234666777777776664 4689999999999999
Q ss_pred HHHHH---hcCCCCeEEEcCCCCCChHHHHH--------------HcCC------EEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMAR--------------IADA------TPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~--------------~~G~------~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.++++ +. +++.|++.+|+|+++...+. ..|. +++.++. .|+++|+++++
T Consensus 127 ~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~ 198 (434)
T 2epj_A 127 TAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFA 198 (434)
T ss_dssp HHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHH
T ss_pred HHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHH
Confidence 99887 44 45788888999987654221 1232 2444543 28999999886
Q ss_pred c---CCcEEEEcCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 227 E---KSRLLILCSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 ~---~~~~i~i~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
+ ++++|+++..+||||.++ +++++++|.++|++| |++||+||+|.++.. +. ...+..... .. .+.||||
T Consensus 199 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~~~-g~-~~~~~~~~~-~~---di~s~sK 271 (434)
T 2epj_A 199 EYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRES-GALLILDEVVTGFRL-GL-EGAQGYFNI-EG---DIIVLGK 271 (434)
T ss_dssp HHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHH-TCEEEEEETTTTTTS-ST-THHHHHHTC-CC---SEEEEEG
T ss_pred hCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEcchhceeC-Cc-chhhHHhCC-CC---Ceeeecc
Confidence 3 455554444467899866 799999999999999 999999999997632 32 111111111 11 1458999
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHH---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC-
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL- 378 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~- 378 (471)
.++ +|+|+||+++++++++.+.... ...+++.+++++.++.++|+. .++ +++.++++++++++.+.|+++
T Consensus 272 ~l~-~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~---~~~--~~~~~~~~~~~~~l~~~L~~~~ 345 (434)
T 2epj_A 272 IIG-GGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKA---LEE--EPVYSVSREAAKALEEAASEVL 345 (434)
T ss_dssp GGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHH---HHH--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHH---HHh--cCHHHHHHHHHHHHHHHHHHHH
Confidence 998 5999999999999988765421 223557889999998888874 111 345566677777777777653
Q ss_pred --CCCe-eeCCCcceEEeEecCCc-cCC-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHH
Q 012095 379 --EGVK-MSEPQGAFYLFIDFSTY-YGS-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA 453 (471)
Q Consensus 379 --~g~~-~~~p~~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~ 453 (471)
.++. ...+. |.++|+.+++. ... .........+..++++.|+++ ||.+.||.. .++|+++..+++++++
T Consensus 346 ~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~v~~~~~----~~~~~~~~~t~e~i~~ 419 (434)
T 2epj_A 346 DRTGLPYTINRV-ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRR-GVFIAPSNL----EAVFTGLPHQGEALEI 419 (434)
T ss_dssp HHHTCCEEEEEE-TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHT-TEECCSSTT----SCEECCTTCSHHHHHH
T ss_pred hhCCCcEEEEEe-eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHC-CeEEeccCC----CcEEEeccCCHHHHHH
Confidence 1343 23344 45678888641 000 000000001256788888865 999999752 3578887779999999
Q ss_pred HHHHHHHHHHhh
Q 012095 454 AVERIKKGLLTL 465 (471)
Q Consensus 454 ~~~~l~~~l~~~ 465 (471)
++++|+++++++
T Consensus 420 ~l~~l~~~l~~~ 431 (434)
T 2epj_A 420 AVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998875
No 181
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.97 E-value=2.8e-29 Score=257.14 Aligned_cols=360 Identities=14% Similarity=0.114 Sum_probs=246.1
Q ss_pred cccccccCCChHHHHHHHHHHHHhcCCCeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCC---CCCCHHHH--HHHH
Q 012095 69 SPRVNAVKPSKTVAITDQATALAQAGVSVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP---NAGTLELR--SAIC 142 (471)
Q Consensus 69 s~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~---~~G~~~lr--~~ia 142 (471)
..++..+.++.+..+.+...+. .+.|+|..+++. .++.+.+++.+++.+.. .+|+. ..|...++ +.++
T Consensus 23 ~~~l~~~~~~i~~~~~~~~~~~----~~~i~l~~~~~~--~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a 96 (447)
T 3h7f_A 23 SAPLAEVDPDIAELLAKELGRQ----RDTLEMIASENF--VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLA 96 (447)
T ss_dssp GCCHHHHCHHHHHHHHHHHHHH----HHSEECCTTCCC--CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHH----hCceeEecCCCC--CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHH
Confidence 3455566665444443322221 246888776654 38889999888775322 23322 13555555 6666
Q ss_pred -HHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH-HH----HHHcCCEEEEecCCCCCCCcC
Q 012095 143 -HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP-EM----ARIADATPVILPTRISENFLL 216 (471)
Q Consensus 143 -~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~-~~----~~~~G~~~~~v~~~~~~~~~l 216 (471)
+++.+.+|.+ . ..++++|+++++..++.++++|||+|++++|+|.++. .. ....+..++.++++++ ++.+
T Consensus 97 ~~~la~~~g~~--~-~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~ 172 (447)
T 3h7f_A 97 RDRAKALFGAE--F-ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLI 172 (447)
T ss_dssp HHHHHHHHTCS--E-EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSC
T ss_pred HHHHHHHcCCC--c-eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCc
Confidence 8888878843 2 3333777888999999999999999999999998732 11 2224567777777643 4679
Q ss_pred CHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCccccccCCCCCCce
Q 012095 217 DPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHTSFASLPGMWERT 294 (471)
Q Consensus 217 d~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~~~~~ 294 (471)
|++++++++. .++++|++++|+||++. + +++|.++|++| |++||+||+|.. +.+.+. ..... . ...
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~---l~~i~~l~~~~-g~lli~Dea~~~g~~~~g~-~~~~~--~---~~d 240 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVL--D---FAAFRSIADEV-GAKLLVDMAHFAGLVAAGL-HPSPV--P---HAD 240 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCC--C---HHHHHHHHHHH-TCEEEEECTTTHHHHHTTS-SCCST--T---TCS
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCcc--C---HHHHHHHHHHc-CCEEEEECCchhhhhcCCC-CCCCC--C---CCc
Confidence 9999999985 47899999999999887 4 89999999999 999999999753 444332 11111 1 223
Q ss_pred EEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCC-CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHH
Q 012095 295 LTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSG-ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVK 373 (471)
Q Consensus 295 i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~-~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~ 373 (471)
+++.|+||.+ +|+|.||+++++++++.+.........+ ++...+.++..++... ...++++.++++.++++++.+
T Consensus 241 i~~~s~sK~l--~G~~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~--~~~~~~~~~~~~~~~~~~l~~ 316 (447)
T 3h7f_A 241 VVSTTVHKTL--GGGRSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIA--ATPEFADRQRRTLSGARIIAD 316 (447)
T ss_dssp EEEEESSGGG--CCCSCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHT--TSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCcCC--CCCCeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHH
Confidence 8899999987 4899999999999999888765544433 3444455555555531 234678889999999999999
Q ss_pred HhcCC----CCCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE----CC--CCCCCCCcEEE
Q 012095 374 SFGEL----EGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PG--DAFGDDTCIRI 442 (471)
Q Consensus 374 ~L~~~----~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~----pg--~~f~~~~~iRi 442 (471)
.|.+. +|+.+.. +.+++++|+++... + .+.. .+..++++.||.+. |+ .....++++|+
T Consensus 317 ~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~---------~~~~-~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRi 385 (447)
T 3h7f_A 317 RLMAPDVAKAGVSVVSGGTDVHLVLVDLRDS-P---------LDGQ-AAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRI 385 (447)
T ss_dssp HHTSHHHHHTTCEEGGGSCSSSEEEEECTTS-S---------CCHH-HHHHHHHHTTEECBC-------------CEEEE
T ss_pred HHHhccccCCCeEEecCCCCCCEEEEEcCCC-C---------CCHH-HHHHHHHHCCeEEecccCCCCCCCCCCCCceec
Confidence 99886 5787754 34567788888542 1 1344 44455666799998 66 33334678999
Q ss_pred Eeec------CHHHHHHHHHHHHHHHHhh
Q 012095 443 SYAA------SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 443 s~~~------~~e~i~~~~~~l~~~l~~~ 465 (471)
++.. ++++++++++.|.+++.+.
T Consensus 386 g~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 386 GTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp ECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred cCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 8753 6799999999999998754
No 182
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=7e-29 Score=249.28 Aligned_cols=284 Identities=16% Similarity=0.214 Sum_probs=210.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~ 205 (471)
+..+..++++.+++++. . .++|++++| ++++..++++++++||.|++++|+|.+.... ++..|++++.
T Consensus 50 ~~~~~~~l~~~la~~~~----~---~~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEG----G---AGAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp CCHHHHHHHHHHHHHHT----C---SEEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCccHHHHHHHHHHHhC----C---CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 45667888888888863 2 256666666 8999999999999999999999999874443 4677999999
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++.+++++++++++|++++|+||||.+++ +++|.++|++| ++++|+||+|..+.+.. .+
T Consensus 122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~De~~~~~~~~~----~~- 185 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREV-GAVSVVDNTFLSPALQN----PL- 185 (386)
T ss_dssp ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTCC----GG-
T ss_pred eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccCC----cc-
Confidence 8862 899999999889999999999999999998 89999999999 99999999999865431 11
Q ss_pred cCCCCCCceEEEecCCcccCccchhh-eeeEcCH-HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~-~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
. .+.++++.|+||.++.+|.|+ ||+++++ ++++.+......++.+.+++.+.++...++. +....+.
T Consensus 186 ~----~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~ 254 (386)
T 1cs1_A 186 A----LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-------LVPRMEL 254 (386)
T ss_dssp G----GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-------HHHHHHH
T ss_pred c----cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-------HHHHHHH
Confidence 1 356799999999998899997 9999986 8999888776665666788888777666642 3445556
Q ss_pred HHHHHHHHHHHhcCCCCCeee-CC-----------------CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCC
Q 012095 364 FRERRDFLVKSFGELEGVKMS-EP-----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQ 425 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~g~~~~-~p-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~g 425 (471)
..++++.+.+.|.+++++... .+ .+++ +.+.+++ ....+.+.| ++.|
T Consensus 255 ~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~~~l-~~~g 319 (386)
T 1cs1_A 255 AQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAM-LSFELDG-------------DEQTLRRFL-GGLS 319 (386)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE-EEEEESS-------------CHHHHHHHH-HTCS
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceE-EEEEECC-------------CHHHHHHHH-HhCC
Confidence 677777777777776443221 11 2555 4455642 344555554 5569
Q ss_pred EEEECCCCCC---------------------------CCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 426 VALVPGDAFG---------------------------DDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 426 V~v~pg~~f~---------------------------~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
|.+.+++ || .++++|+|++. ++.++.+++|.++++++.
T Consensus 320 i~~~~~~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 320 LFTLAES-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp SSEEBSC-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred cceEccc-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 9876421 22 14799999998 345555666666665543
No 183
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.97 E-value=5.7e-29 Score=251.03 Aligned_cols=282 Identities=17% Similarity=0.177 Sum_probs=200.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~ 205 (471)
+.+...++++.+++++ |. + +.++++++++++..++++++++||.|++++|+|.++...+ +..|++++.
T Consensus 63 ~~~~~~~l~~~la~~~----g~---~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (398)
T 1gc0_A 63 SNPTLNLLEARMASLE----GG---E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH 134 (398)
T ss_dssp CCHHHHHHHHHHHHHH----TC---S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred CChHHHHHHHHHHHHh----CC---C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 3344556666666654 42 2 5555556679999999999999999999999999988765 678999999
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++++++++++++++|++++|+||||.+++ +++|.++|++| ++++|+||+|..+.+.. ++
T Consensus 135 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~-~~~li~D~~~~~~~~~~----~~- 198 (398)
T 1gc0_A 135 VDMA-------DLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKH-GATVVVDNTYCTPYLQR----PL- 198 (398)
T ss_dssp ECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGG-TCEEEEECTTTHHHHCC----GG-
T ss_pred ECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-
Confidence 8752 899999999989999999999999999998 99999999999 99999999998765421 11
Q ss_pred cCCCCCCceEEEecCCcccCccchhh-eeeEcCHHHHH-HHHHHHhc-ccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPKHFVA-ACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~~~i~-~l~~~~~~-~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. .+..+++.|+||.++.+|+|+ ||+++++++++ .+...... ++.+.+++.+.++...++. +....+
T Consensus 199 ~----~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~ 267 (398)
T 1gc0_A 199 E----LGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-------LNLRMD 267 (398)
T ss_dssp G----GTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-------HHHHHH
T ss_pred h----hCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-------HHHHHH
Confidence 1 245699999999999899998 99999988776 56555544 4556788888877777753 234444
Q ss_pred HHHHHHHHHHHHhcCCCCC--------------eeeCC----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcC
Q 012095 363 AFRERRDFLVKSFGELEGV--------------KMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 424 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~--------------~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~ 424 (471)
...++++.+.+.|.+++++ ++..+ .+++ +.+.++. ..+....++++.
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~-~~~~l~~--------------~~~~~~~~l~~~ 332 (398)
T 1gc0_A 268 RHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGM-IAFELKG--------------GIGAGRRFMNAL 332 (398)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTE-EEEEETT--------------HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceE-EEEEECC--------------CHHHHHHHHHhC
Confidence 5555666666666654332 22222 3555 4446642 223344455666
Q ss_pred CEEEEC---CCCC----------------------CC-CCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 425 QVALVP---GDAF----------------------GD-DTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 425 gV~v~p---g~~f----------------------~~-~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
++.+.. |+.+ |. +++||+|++. ++++++.+.+.|+++
T Consensus 333 ~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 333 QLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp SSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 777655 4220 11 4799999998 556677766666543
No 184
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=9.7e-30 Score=258.76 Aligned_cols=336 Identities=14% Similarity=0.135 Sum_probs=229.8
Q ss_pred cCCCeEEcCCCC--CCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGE--PDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~--~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.+|||+.|. ..++ .|+.+.+++.+++.++. .|+ +..++++.+++++.+.++ .+++|++++|+++++.
T Consensus 50 ~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea~~ 122 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGL-TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEATM 122 (424)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCS-CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHHHH
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC-CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHHHH
Confidence 577899999886 3444 47899999999987642 332 345778888888877764 5689999999999999
Q ss_pred HHHHH---hcCCCCeEEEcCCCCCChHHHHHH--------------cCC------EEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 170 QAVLA---VCSPGDEVIIPAPFWVSYPEMARI--------------ADA------TPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 170 ~~~~~---l~~~gd~Vlv~~p~y~~~~~~~~~--------------~G~------~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.+++. +.+ ++.|++.+|+|+++...+.. .|. +++.++. .|+++|+++++
T Consensus 123 ~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~ 194 (424)
T 2e7u_A 123 SALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLK 194 (424)
T ss_dssp HHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHH
T ss_pred HHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHH
Confidence 98886 444 57888999999886543221 121 3444443 38999999886
Q ss_pred c--CCcEEEEcCCCCC-cccCC-CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCc
Q 012095 227 E--KSRLLILCSPSNP-TGSVY-PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSK 302 (471)
Q Consensus 227 ~--~~~~i~i~~p~NP-tG~~~-~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 302 (471)
+ +..++++++|+|+ ||.++ +++++++|.++ ++| |++||+||+|.++ ..+.. ........ ... +.||||
T Consensus 195 ~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~-g~~lI~DEv~~g~-~~g~~-~~~~~~~~-~~d---i~s~sK 266 (424)
T 2e7u_A 195 RRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAY-GVLLIADEVMTGF-RLAFG-GATELLGL-KPD---LVTLGK 266 (424)
T ss_dssp HHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGG-TCEEEEECTTTTT-TSSTT-HHHHHHTC-CCS---EEEECG
T ss_pred hCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHc-CCEEEEecCcccc-ccchh-HHHHHhCC-Ccc---hhhhhh
Confidence 3 2334556677654 89765 79999999999 999 9999999999987 33321 11111111 111 348999
Q ss_pred ccCccchhheeeEcCHHHHHHHHHHH---hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCC-
Q 012095 303 AFAMTGWRLGYIAGPKHFVAACNKIQ---SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL- 378 (471)
Q Consensus 303 ~~g~~G~R~G~v~~~~~~i~~l~~~~---~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~- 378 (471)
.+| +|+|+||+++++++++.+.... ...+++.+++++.++.++|+. .++ .+++.++++++++++.+.|+++
T Consensus 267 ~l~-~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~---~~~-~~~~~~~~~~~~~~l~~~L~~~~ 341 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLEL---LEE-NPGYYAYLEDLGARLEAGLKEVL 341 (424)
T ss_dssp GGG-TTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHH---HHH-CTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHH---HHh-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999 6999999999999988776521 223557889999999988874 111 2456667777777777777653
Q ss_pred --CCCe-eeCCCcceEEeEecCCccCCcc-c-CCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHH
Q 012095 379 --EGVK-MSEPQGAFYLFIDFSTYYGSEA-E-GFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQA 453 (471)
Q Consensus 379 --~g~~-~~~p~~g~~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~ 453 (471)
.++. ...+. |.++|+.+++...... . ......+..++++.|++ +||.+.||.. ..+|+++..+++++++
T Consensus 342 ~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~v~~~~~----~~~~~~~~~t~~~i~~ 415 (424)
T 2e7u_A 342 KEKGLPHTVNRV-GSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLD-RGIYWPPSNF----EAAFLSVAHREEDVEK 415 (424)
T ss_dssp HHTTCCCEEEEE-TTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHT-TTEECCSSSS----SCEECCTTCCHHHHHH
T ss_pred HhCCCceEEEee-ceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHH-CCeEEeccCC----CceEeeccCCHHHHHH
Confidence 1442 23444 4468888864100000 0 00000124578888885 5999999752 3578887779999999
Q ss_pred HHHHHHHHH
Q 012095 454 AVERIKKGL 462 (471)
Q Consensus 454 ~~~~l~~~l 462 (471)
++++|++++
T Consensus 416 ~l~~l~~~l 424 (424)
T 2e7u_A 416 TLEALRKAL 424 (424)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998763
No 185
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.3e-28 Score=249.18 Aligned_cols=288 Identities=15% Similarity=0.175 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~ 210 (471)
...++.+++.+.+.+|. +++++++|+++++..++++++++||+|++++|+|.++...++. .|++++.++.+
T Consensus 80 ~p~~~~l~~~la~~~g~----~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 154 (414)
T 3ndn_A 80 NPTVSVFEERLRLIEGA----PAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD- 154 (414)
T ss_dssp CHHHHHHHHHHHHHHTC----SEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-
T ss_pred ChHHHHHHHHHHHHHCC----CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC-
Confidence 34666666666666662 5789999999999999999999999999999999998876644 99999999863
Q ss_pred CCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCC
Q 012095 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (471)
|+++|++++++++++|++++|+||||.+.+ +++|+++|++| +++||+||+|....+.. ++ .
T Consensus 155 ------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~~----~~-----~ 215 (414)
T 3ndn_A 155 ------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAA-GAKVVLDNVFATPLLQQ----GF-----P 215 (414)
T ss_dssp ------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHCC----CG-----G
T ss_pred ------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHc-CCEEEEECCCcccccCC----ch-----h
Confidence 899999999999999999999999999998 88999999999 99999999998432211 11 1
Q ss_pred CCceEEEecCCcccCccc-hhheeeEcCHHHHH-HHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHH
Q 012095 291 WERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVA-ACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERR 368 (471)
Q Consensus 291 ~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~-~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r 368 (471)
.+..+++.|+||.+|.+| +|+||++++++.+. .+.........+.+++...++...+ +++....++..+++
T Consensus 216 ~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l-------~~l~~r~~~~~~~a 288 (414)
T 3ndn_A 216 LGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGL-------ETLAIRVQHSNASA 288 (414)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHG-------GGHHHHHHHHHHHH
T ss_pred cCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHH
Confidence 244589999999998778 89999999998876 6665555555556666544443333 33556666777888
Q ss_pred HHHHHHhcCCCCCee-eCCC----------------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECC
Q 012095 369 DFLVKSFGELEGVKM-SEPQ----------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPG 431 (471)
Q Consensus 369 ~~l~~~L~~~~g~~~-~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg 431 (471)
+.+.+.|++.|++.. ..|. .|..+++.++...... ......|.+.|. ..++.+..|
T Consensus 289 ~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~------~~~~~~~~~~l~-~~~~~~s~G 361 (414)
T 3ndn_A 289 QRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVA------KQRAFEVLDKMR-LIDISNNLG 361 (414)
T ss_dssp HHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGH------HHHHHHHHHHCS-SSEECSCCS
T ss_pred HHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcccc------HHHHHHHHHhCc-cceEcCCCC
Confidence 889999988877643 2232 3556888886410000 013456666543 347777777
Q ss_pred CCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 432 DAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 432 ~~f~-----------------------~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
..+. .+++||||++. |+.++.++.|++++
T Consensus 362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 6542 24689999997 23445555555554
No 186
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=1e-29 Score=261.81 Aligned_cols=335 Identities=11% Similarity=0.037 Sum_probs=233.5
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHH----cCCCCCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIR----EGFTRYT-PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~----~~~~~Y~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
+++.|.|..+..... |+.+.+++.+++. .+...|. ...+..++.+.+.+++.+.+|. ++++|++|+|+++++
T Consensus 65 ~~~~iyld~~~~g~~-p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~~~v~~t~g~t~al 141 (465)
T 3e9k_A 65 DENAIYFLGNSLGLQ-PKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGA--NEKEIALMNALTVNL 141 (465)
T ss_dssp TCBCEECBTTTSCCE-ETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTC--CGGGEEECSCHHHHH
T ss_pred CCCeEEecCCccCCC-hHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCC--CcCCEEEECCHHHHH
Confidence 346888988875432 4444444444332 1211111 1112223333344444444553 578999999999999
Q ss_pred HHHHHHhcCCCCe---EEEcCCCCCChHH----HHHHcCCEEE-----EecCCCCCCCcCCHHHHHhhhc---cCCcEEE
Q 012095 169 LQAVLAVCSPGDE---VIIPAPFWVSYPE----MARIADATPV-----ILPTRISENFLLDPKVLESKLT---EKSRLLI 233 (471)
Q Consensus 169 ~~~~~~l~~~gd~---Vlv~~p~y~~~~~----~~~~~G~~~~-----~v~~~~~~~~~ld~e~l~~~l~---~~~~~i~ 233 (471)
..++.++++|||. |++++|+|+++.. .++..|++++ .++. ++++.+|+++++++++ +++++|+
T Consensus 142 ~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~--~~~~~~d~~~l~~~i~~~~~~~~lv~ 219 (465)
T 3e9k_A 142 HLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPR--EGEETLRIEDILEVIEKEGDSIAVIL 219 (465)
T ss_dssp HHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCC--TTCSSCCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecC--CCCCccCHHHHHHHHHhcCCCeEEEE
Confidence 9999999887655 9999999988544 6677898852 3343 3457799999999996 6789999
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhhee
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGY 313 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~ 313 (471)
+++|+||||.+++ +++|.++|++| |++||+|++|... .....+.. .+..+++.|++|.++....++|+
T Consensus 220 ~~~~~n~tG~~~~---l~~i~~la~~~-g~~vi~D~a~~~g----~~~~~~~~----~~~D~~~~s~~K~l~~gp~~~g~ 287 (465)
T 3e9k_A 220 FSGVHFYTGQHFN---IPAITKAGQAK-GCYVGFDLAHAVG----NVELYLHD----WGVDFACWCSYKYLNAGAGGIAG 287 (465)
T ss_dssp EESBCTTTCBBCC---HHHHHHHHHHT-TCEEEEECTTTTT----TSCCCHHH----HTCCEEEECSSSTTCCCTTCCCE
T ss_pred EeCcccCcceeec---HHHHHHHHHHc-CCEEEEEhhhhcC----CcCCchhh----cCCCEEEECcccccccCCCceEE
Confidence 9999999999999 88999999999 9999999999752 21111111 24458899999999323337899
Q ss_pred eEcCHHHHHHHHHHHh-------------------------cccCCCChHHHHHHHHHHhccCCChHH-HHHHHHHHHHH
Q 012095 314 IAGPKHFVAACNKIQS-------------------------QFTSGASSISQKAGVAALGLGYAGGEV-VSKMVKAFRER 367 (471)
Q Consensus 314 v~~~~~~i~~l~~~~~-------------------------~~~~~~~~~~q~aa~~~L~~~~~~~~~-~~~~~~~~~~~ 367 (471)
+++++++++.+..... ....+++.+...++.++++. ..++ +++++++++++
T Consensus 288 l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~---~~~~~~~~~~~~~~~~ 364 (465)
T 3e9k_A 288 AFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEI---FKQATMKALRKKSVLL 364 (465)
T ss_dssp EEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHH---HHHHCHHHHHHHHHHH
T ss_pred EEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHH---HHHcCHHHHHHHHHHH
Confidence 9999888765431100 00114666677777777764 2333 78899999999
Q ss_pred HHHHHHHhcCC----------CCCeeeCCC----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 368 RDFLVKSFGEL----------EGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 368 r~~l~~~L~~~----------~g~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
++++.+.|+++ +|+++..|. .|.++++.++. +..++.+.|.++ ||.+.
T Consensus 365 ~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~-------------~~~~l~~~L~~~-Gi~v~---- 426 (465)
T 3e9k_A 365 TGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSV-------------PNKDVFQELEKR-GVVCD---- 426 (465)
T ss_dssp HHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECC-------------TTCCHHHHHHTT-TEECE----
T ss_pred HHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecC-------------CHHHHHHHHHHC-CEEEe----
Confidence 99999999884 688888775 25557777762 345788888765 99986
Q ss_pred CCCCCcEEEEe-ec--CHHHHHHHHHHHHHHHHhhC
Q 012095 434 FGDDTCIRISY-AA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 434 f~~~~~iRis~-~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+..++++|+++ .. ++++++++++.|++++++..
T Consensus 427 ~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 427 KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 33468999998 33 89999999999999987643
No 187
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.97 E-value=1.2e-29 Score=258.38 Aligned_cols=348 Identities=14% Similarity=0.105 Sum_probs=220.5
Q ss_pred cCCCeEEcCCCCC--CCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHH
Q 012095 93 AGVSVIRLAAGEP--DFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSIL 169 (471)
Q Consensus 93 ~g~~~i~l~~g~~--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 169 (471)
.|+.++|+..|.. .++ .++.+.+++.+++.+....+.+. +....+++.+.+.++ ..+++++|+|+++++.
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~----~~~~~la~~l~~~~~---~~~~v~~~~sGsea~~ 123 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAPT----EMEVKMAQLVTDLVP---TMDMVRMVNSGTEATM 123 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCSSCC----HHHHHHHHHHHHHST---TCSEEEEESSHHHHHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcccCCCC----HHHHHHHHHHHhhCC---CCCEEEEeCcHHHHHH
Confidence 5788999998874 344 37899999999987643222243 455556666655554 4689999999999999
Q ss_pred HHHHHhc--CCCCeEEEcCCCCCChHHHHH-HcC--CEEEEecCCCCCCC------------cCCHHHHHhhhcc--CCc
Q 012095 170 QAVLAVC--SPGDEVIIPAPFWVSYPEMAR-IAD--ATPVILPTRISENF------------LLDPKVLESKLTE--KSR 230 (471)
Q Consensus 170 ~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~-~~G--~~~~~v~~~~~~~~------------~ld~e~l~~~l~~--~~~ 230 (471)
.+++... ..++.|++.+++|+++...+. ..| ......+.. .++ ..|+++|++++++ +..
T Consensus 124 ~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 124 SAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNS--PGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHCCCEEEEETTCCCC------------------CCC--TTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCc--CCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 9988543 256789999999988765221 111 111111110 000 0189999999864 234
Q ss_pred EEEEcCCCCCcc-c-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc
Q 012095 231 LLILCSPSNPTG-S-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG 308 (471)
Q Consensus 231 ~i~i~~p~NPtG-~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 308 (471)
++++++|+||+| . ..+++.+++|.++|++| |++||+||+|.++ ..+.. ........ ... +.||||.++ +|
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~-r~g~~-~~~~~~~~-~pd---i~t~sK~~~-~G 273 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEF-GALLIIDEVMTGF-RVALA-GAQDYYHV-IPD---LTCLGKIIG-GG 273 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEEETTTBT-TTBTT-CHHHHTTC-CCS---EEEEEGGGG-TT
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCc-ccCcc-hHHHhcCC-CCC---eeeeccccc-CC
Confidence 555677766554 3 34466799999999999 9999999999987 43321 11111111 111 458999998 89
Q ss_pred hhheeeEcCHHHHHHHHHH---HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 012095 309 WRLGYIAGPKHFVAACNKI---QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE 385 (471)
Q Consensus 309 ~R~G~v~~~~~~i~~l~~~---~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~ 385 (471)
+|+||+++++++++.+... ....+++.+++++.++.++|+.... ++++++.++..+..++.+.+.+.+. ++....
T Consensus 274 ~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~ 351 (429)
T 4e77_A 274 MPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQ-VGVYETLTELTDSLATGLRHAAKEE-NIPLVV 351 (429)
T ss_dssp SCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTS-TTHHHHHHHHHHHHHHHHHHHHHHT-TCCCEE
T ss_pred CCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhC-CCceEE
Confidence 9999999999999887642 1234557899999999999874221 3344444444444444444444334 333333
Q ss_pred CCcceEEeEecCCccCC-cc--cCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 386 PQGAFYLFIDFSTYYGS-EA--EGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 386 p~~g~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+..|+|+|+.+++.... .. ..........++++.|+++ ||.+.|+.. ..+|+++..+++++++++++|++++
T Consensus 352 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~~l~~~l 426 (429)
T 4e77_A 352 NHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE-GVYLAPSAF----EAGFMSLAHSNEDIQKTVNAARRCF 426 (429)
T ss_dssp EEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT-TEECCSSTT----SCEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC-CeEEeecCC----CCEEEeccCCHHHHHHHHHHHHHHH
Confidence 44566688888642000 00 0000000226788888876 999999752 4578877779999999999999998
Q ss_pred Hh
Q 012095 463 LT 464 (471)
Q Consensus 463 ~~ 464 (471)
++
T Consensus 427 ~~ 428 (429)
T 4e77_A 427 AK 428 (429)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 188
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.97 E-value=5.8e-29 Score=251.25 Aligned_cols=292 Identities=16% Similarity=0.175 Sum_probs=202.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCC
Q 012095 126 TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADA 201 (471)
Q Consensus 126 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~ 201 (471)
.+| ++++..+|++.++++++ . .++|++++| ++++..++. ++++||+|++++|+|.+.... ++..|+
T Consensus 62 ~r~-~~p~~~~l~~~la~~~g----~---~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 62 SRS-GNPTRNCLEKAVAALDG----A---KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp -----CHHHHHHHHHHHHHHT----C---SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred cCC-CCchHHHHHHHHHHHhC----C---CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 344 55667889999998863 2 256666666 589999998 899999999999999875443 357899
Q ss_pred EEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCC-eEEEEccCCCccccCCCC
Q 012095 202 TPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPR-LLVLSDEIYEHIIYAPAT 280 (471)
Q Consensus 202 ~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~-~~ii~De~y~~~~~~~~~ 280 (471)
+++.++.+ |++++++++++++++|++++|+||||.+++ +++|+++|++| + +++|+||+|..+.+..
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~-g~~~livD~~~~~~~~~~-- 198 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKH-GDIILVVDNTFMSPYFQR-- 198 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSS-SCCEEEEECTTTCTTTCC--
T ss_pred EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHc-CCCEEEEECCCcccccCC--
Confidence 99999863 899999999989999999999999999999 99999999999 9 9999999998764321
Q ss_pred ccccccCCCCCCceEEEecCCcccCccch-hheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHH
Q 012095 281 HTSFASLPGMWERTLTVNGFSKAFAMTGW-RLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVS 358 (471)
Q Consensus 281 ~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~ 358 (471)
++ . .+.++++.|+||.++.+|. |+||++++ +++++.+......++.+.+++.+.++...|+. ....++
T Consensus 199 --~~---~--~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~ 268 (403)
T 3cog_A 199 --PL---A--LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---LHVRME 268 (403)
T ss_dssp --TT---T--TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHH
T ss_pred --cc---c--cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH---HHHHHH
Confidence 11 1 3567999999999987664 79999984 78999988877767777889998888877764 122233
Q ss_pred HHHHHHHHHHHHHH----------HHhcCCCCCeeeCCC----cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcC
Q 012095 359 KMVKAFRERRDFLV----------KSFGELEGVKMSEPQ----GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 424 (471)
Q Consensus 359 ~~~~~~~~~r~~l~----------~~L~~~~g~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~ 424 (471)
+..+......+++. ..|.++||+++..++ ++++.| .++. ...+. ..++++.
T Consensus 269 ~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~-~l~~-------------~~~~~-~~~l~~~ 333 (403)
T 3cog_A 269 KHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTF-YIKG-------------TLQHA-EIFLKNL 333 (403)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEE-EESS-------------CHHHH-HHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEE-EecC-------------CHHHH-HHHHHhC
Confidence 22222222222222 224444566554443 777666 5653 22333 3445555
Q ss_pred CEEEEC---C----------CCC------------CC-CCcEEEEeecCHHHHHHHHHHHHHHHHhhCC
Q 012095 425 QVALVP---G----------DAF------------GD-DTCIRISYAASLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 425 gV~v~p---g----------~~f------------~~-~~~iRis~~~~~e~i~~~~~~l~~~l~~~~~ 467 (471)
||.+.. | +.+ +. ++++|||++. ++.++.+++|.++++++..
T Consensus 334 ~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 334 KLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp SSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHCC
T ss_pred CcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHhhc
Confidence 774432 2 111 22 5799999998 2334445555556555443
No 189
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.97 E-value=4.9e-29 Score=244.87 Aligned_cols=278 Identities=15% Similarity=0.156 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCC
Q 012095 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRIS 211 (471)
Q Consensus 136 ~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~ 211 (471)
+|++.+++++ |. ++.+++++| ++++..++.+++++||+|++++|+|+++...+ +..|++++.++.
T Consensus 2 ~l~~~la~~~----g~---~~~i~~~sG-~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLE----HA---EACAATASG-MGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHH----TC---SEEEEESSH-HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHh----CC---CeEEEeCCh-HHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 5788888876 32 245555555 89999999999999999999999999987664 458999999875
Q ss_pred CCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh-CCCeEEEEccCCCccccCCCCccccccCCCC
Q 012095 212 ENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK-HPRLLVLSDEIYEHIIYAPATHTSFASLPGM 290 (471)
Q Consensus 212 ~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 290 (471)
.|++++++++++++++|++++|+||||.+++ +++|.++|++ | ++++|+||+|..+.+.. ++ .
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~-~~~li~D~a~~~~~~~~----~~-----~ 133 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQK-DILVIVDNTFASPILTN----PL-----D 133 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSS-SCEEEEECTTTHHHHCC----GG-----G
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhc-CCEEEEECCCcccccCC----hh-----h
Confidence 3889999999888999999999999999998 9999999999 9 99999999998654421 11 1
Q ss_pred CCceEEEecCCcccCccchh-heeeEcCH-HHHHHHHHHHhc-ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 291 WERTLTVNGFSKAFAMTGWR-LGYIAGPK-HFVAACNKIQSQ-FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 291 ~~~~i~~~S~SK~~g~~G~R-~G~v~~~~-~~i~~l~~~~~~-~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
.++++++.|+||.++.+|.| +||+++++ ++++.+...... ++.+.+++.+.++...++. .....+...+..+..
T Consensus 134 ~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~ 210 (331)
T 1pff_A 134 LGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLT---LDMRVKRAAENAQKV 210 (331)
T ss_dssp GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch---HHHHHHHHHHHHHHH
Confidence 35679999999999989999 79999998 999988876655 5567888888777666653 122222222222222
Q ss_pred HHHHHH----------HhcCCCCCeeeCC----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC
Q 012095 368 RDFLVK----------SFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA 433 (471)
Q Consensus 368 r~~l~~----------~L~~~~g~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~ 433 (471)
.+++.+ .|.+++|+++..+ .+++ +.+.++ +..++.+. +++.||.+.+++.
T Consensus 211 ~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~-l~~~gI~~~~~s~ 274 (331)
T 1pff_A 211 AEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSM-IAFDVD--------------GLEKAKKV-LDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSE-EEEECS--------------SHHHHHHH-HHTCSSSEECSSC
T ss_pred HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceE-EEEEEC--------------CHHHHHHH-HHhCCCceeccCC
Confidence 222222 2223344444322 3444 555654 34455554 4556997766531
Q ss_pred -------------------------CCC-CCcEEEEeec--CHHHHHHHHHHHHH
Q 012095 434 -------------------------FGD-DTCIRISYAA--SLTTLQAAVERIKK 460 (471)
Q Consensus 434 -------------------------f~~-~~~iRis~~~--~~e~i~~~~~~l~~ 460 (471)
++. ++++|+|++. ++++++.+++.|++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 122 5799999998 56777777777654
No 190
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=4.1e-28 Score=244.36 Aligned_cols=316 Identities=17% Similarity=0.164 Sum_probs=223.6
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAG--TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPA 186 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~ 186 (471)
++++.+++.+++.. +|.+..| ..+++++++++++ .+++++|+|+++++..+++++ +++||+|+++.
T Consensus 11 ~~~v~~a~~~~~~~---~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~ 79 (394)
T 1o69_A 11 GGNELKYIEEVFKS---NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLASS 79 (394)
T ss_dssp -CCHHHHHHHHHHH---TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEES
T ss_pred CHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECC
Confidence 35677888887765 3656667 8899999999872 278999999999999999999 89999999999
Q ss_pred CCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 187 PFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 187 p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
|+|+++...++..|++++.++++ .+|.+|++++++++++ ++++|++++ |||...+ +++|.++|+++ ++
T Consensus 80 ~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~-~~ 150 (394)
T 1o69_A 80 FTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKEN-DI 150 (394)
T ss_dssp SSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHT-TC
T ss_pred CccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHc-CC
Confidence 99999999999999999999986 4577999999999976 789999875 8998877 99999999999 99
Q ss_pred EEEEccCCC-ccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHHHHHHHHhcccCC-------
Q 012095 264 LVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVAACNKIQSQFTSG------- 334 (471)
Q Consensus 264 ~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~~~~------- 334 (471)
+||+||+|. ++.+.+.. +..+ .+ +.+.||||..+++|.|+||++++ +++++.+.........+
T Consensus 151 ~li~Dea~~~g~~~~~~~---~~~~---~~--~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 222 (394)
T 1o69_A 151 VLIEDAAEALGSFYKNKA---LGTF---GE--FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHL 222 (394)
T ss_dssp EEEEECTTCTTCEETTEE---TTSS---SS--EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCS
T ss_pred EEEEECcCcccceeCCcc---cccc---cC--cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCcccccc
Confidence 999999998 45454321 1111 12 55666754445567899999995 89999888764432111
Q ss_pred -------CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC----cce-EEeEecCCccC-
Q 012095 335 -------ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ----GAF-YLFIDFSTYYG- 401 (471)
Q Consensus 335 -------~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~----~g~-~~~~~~~~~~~- 401 (471)
.+.+...++...+ +++++..++++++++++.+.|.++ +++.++. +++ .+++.++....
T Consensus 223 ~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~ 293 (394)
T 1o69_A 223 DYGYNYRLSNVLGAIGVAQM-------EVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNE 293 (394)
T ss_dssp SCCCBCBCCHHHHHHHHHHH-------TTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGG
T ss_pred ccCcccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhc
Confidence 2223322222222 235667788889999999999876 5554432 343 35666653100
Q ss_pred ---------CcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC------CC--------------CcEEEEeec--CHHH
Q 012095 402 ---------SEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG------DD--------------TCIRISYAA--SLTT 450 (471)
Q Consensus 402 ---------~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~------~~--------------~~iRis~~~--~~e~ 450 (471)
....+.....+..++.+.|.++ ||.+.+|.... .. ..+|+.... ++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ed 372 (394)
T 1o69_A 294 LNACQKDINISQKNITLHPKISKLIEDLKNK-QIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDD 372 (394)
T ss_dssp SCCCCEEEECCCCCCCCCHHHHHHHHHHHHT-TCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHH
T ss_pred cccccccccccccccccccCHHHHHHHHHHc-CCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHH
Confidence 0000000001456788887764 99999985320 00 234444443 8999
Q ss_pred HHHHHHHHHHHHH
Q 012095 451 LQAAVERIKKGLL 463 (471)
Q Consensus 451 i~~~~~~l~~~l~ 463 (471)
++++++.|+++++
T Consensus 373 i~~~~~~l~~~~~ 385 (394)
T 1o69_A 373 VYEISKLILKSIK 385 (394)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 191
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=9.8e-28 Score=241.25 Aligned_cols=281 Identities=15% Similarity=0.183 Sum_probs=203.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v 206 (471)
.+...+|++.+++++ |. +++++++++++++..++++++++||.|++++|+|.++... ++..|++++.+
T Consensus 58 ~~~~~~l~~~la~~~----g~----~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 129 (389)
T 3acz_A 58 NPTVEQFEEMVCSIE----GA----AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI 129 (389)
T ss_dssp CHHHHHHHHHHHHHH----TC----SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHHh----CC----CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE
Confidence 444567777777775 42 2666677778999999999999999999999999987655 57789999999
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
+. .|++++++++++++++|++++|+||||.+++ +++|.++|++| ++++|+||+|..+.+. .++ .
T Consensus 130 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~-~~~livD~~~~~~~~~----~~~-~ 193 (389)
T 3acz_A 130 DT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHER-GARLVVDATFTSPCFL----KPL-E 193 (389)
T ss_dssp CT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTTC----CGG-G
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccc----Ccc-c
Confidence 86 3899999999989999999999999999999 89999999999 9999999999875432 111 1
Q ss_pred CCCCCCceEEEecCCcccCccchhh-eeeEcCH-HHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTGWRL-GYIAGPK-HFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~~~-~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
.+..+++.|+||.++.+|.|+ ||+++++ ++++.+......++.+.+++.+.++...|+. ....++ +.
T Consensus 194 ----~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---l~~r~~----~~ 262 (389)
T 3acz_A 194 ----LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLMAPMDAFLCARGMKT---LPIRMQ----IH 262 (389)
T ss_dssp ----TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT---HHHHHH----HH
T ss_pred ----cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH---HHHHHH----HH
Confidence 356699999999999899998 9999998 9999988776656666788887777777753 122233 33
Q ss_pred HHHHHHHHHHhcCC--------------CCCeeeCC----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCE
Q 012095 365 RERRDFLVKSFGEL--------------EGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQV 426 (471)
Q Consensus 365 ~~~r~~l~~~L~~~--------------~g~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV 426 (471)
.++++.+.+.|++. |++.+..+ .+++ +.+.++ ...+ ...++++.||
T Consensus 263 ~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~-~~~~l~--------------~~~~-~~~~l~~~~i 326 (389)
T 3acz_A 263 MENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGST-FLFEMK--------------SFEA-AKKLMEHLKV 326 (389)
T ss_dssp HHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE-EEEEES--------------SHHH-HHHHHTTCSS
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeE-EEEEEC--------------CHHH-HHHHHHhCCC
Confidence 33344444444332 23333221 2454 555664 2223 3445566688
Q ss_pred EEEC---C------CCC----------------CC-CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 427 ALVP---G------DAF----------------GD-DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 427 ~v~p---g------~~f----------------~~-~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.+.+ | ..+ |. +++||+|++.. +.++.++.|.+++++
T Consensus 327 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~~ 388 (389)
T 3acz_A 327 CTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALEL 388 (389)
T ss_dssp SEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHTC
T ss_pred cEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 7776 4 221 11 47899999984 566677777777653
No 192
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=2.7e-27 Score=239.84 Aligned_cols=299 Identities=19% Similarity=0.204 Sum_probs=209.5
Q ss_pred CCChHHHHHHHHHHHHcCCCCCCCC--CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEE
Q 012095 107 FDTPVLIAEAGINAIREGFTRYTPN--AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVII 184 (471)
Q Consensus 107 ~~~p~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv 184 (471)
++.|+.+.+++. ..+.+.|+.. ....++++.+++++ | .+++++++|+++++..++++++++||+|++
T Consensus 32 ~~~~~~~~~~~~---~~~~~~y~~~~~~~~~~l~~~la~~~----g----~~~~~~~~~gt~a~~~al~~l~~~gd~vi~ 100 (412)
T 2cb1_A 32 FKTLEEGQERFA---TGEGYVYARQKDPTAKALEERLKALE----G----ALEAVVLASGQAATFAALLALLRPGDEVVA 100 (412)
T ss_dssp CSSHHHHHHHHH---HCCSCSBTTTCCHHHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEE
T ss_pred cCChHHHHHHhc---cccCcCcCCCCChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 455666666553 3344567643 34566777766665 4 248999999999999999999999999999
Q ss_pred cCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 185 PAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 185 ~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
++|+|.++... ++..|++++.++. |+++|++++++++++|++++|+||||.+++ +++|+++|++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~ 169 (412)
T 2cb1_A 101 AKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEEA 169 (412)
T ss_dssp ETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH
T ss_pred eCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHHc
Confidence 99999876654 3457999999874 489999999989999999999999999998 99999999999
Q ss_pred CCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH----------------------
Q 012095 261 PRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK---------------------- 318 (471)
Q Consensus 261 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~---------------------- 318 (471)
++++|+||+|..+.+.. ... ..+..+++.|+||.++.+|+|+||+++.+
T Consensus 170 -~~~li~D~~~~~~~~~~---~~~-----~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (412)
T 2cb1_A 170 -GVALVVDNTFGAAGALC---RPL-----AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW 240 (412)
T ss_dssp -TCEEEEECGGGTTTTSC---CGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred -CCEEEEECCCccccccC---Ccc-----ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence 99999999998752111 111 13567999999999988999999988543
Q ss_pred ------HHHHHHHHHH-hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee-CCC---
Q 012095 319 ------HFVAACNKIQ-SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS-EPQ--- 387 (471)
Q Consensus 319 ------~~i~~l~~~~-~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~-~p~--- 387 (471)
++.+.++... .....+.++....++...++. +....++..++.+.+.+.|.+.+++.+. .|.
T Consensus 241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-------l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~ 313 (412)
T 2cb1_A 241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-------VALRVARMSETARFLAERLQGHPKVKALRYPGLPE 313 (412)
T ss_dssp HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-------HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTT
T ss_pred hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-------HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCC
Confidence 3445554433 222333455544443333332 3444555667888889999888888743 221
Q ss_pred -------------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCC---------CC-----------
Q 012095 388 -------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGD---------AF----------- 434 (471)
Q Consensus 388 -------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~---------~f----------- 434 (471)
.+.++.+.+ . +.+.+.+ ++++.||.+ .|+ .+
T Consensus 314 ~p~~~~~~~~~~~~~~iv~~~~-~-------------~~~~~~~-~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~ 377 (412)
T 2cb1_A 314 DPAHRNARKYLASGGPILTLDL-G-------------DLERASR-FLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEE 377 (412)
T ss_dssp CTTHHHHHHHCSSSCSEEEEEC-S-------------SHHHHHH-HHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHH
T ss_pred CccHHHHHHhCCCCceEEEEEe-C-------------CHHHHHH-HHHhCCeee-ecccCCCcceeecCcccccccCCHH
Confidence 233355565 2 3445554 455569998 764 11
Q ss_pred -----C-CCCcEEEEeec--CHHHHHHHHHHHH
Q 012095 435 -----G-DDTCIRISYAA--SLTTLQAAVERIK 459 (471)
Q Consensus 435 -----~-~~~~iRis~~~--~~e~i~~~~~~l~ 459 (471)
| .++.||+|++. ++++++.+++.|+
T Consensus 378 ~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~ 410 (412)
T 2cb1_A 378 ARLQAGVTPGLVRVSVGLEDPLDLLALFEEALE 410 (412)
T ss_dssp HHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 1 04789999998 5567777776664
No 193
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1.9e-27 Score=242.17 Aligned_cols=283 Identities=15% Similarity=0.172 Sum_probs=206.7
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~ 209 (471)
..++++.+++++ |. .+.|++++|+ +++..++++++++||+|++++|.|.++... ++..|++++.++.+
T Consensus 116 ~~~l~~~lA~l~----g~---~~~v~~~sG~-~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 116 TVVLEEKISALE----GA---ESTLLMASGM-CASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHH----TC---SEEEEESCHH-HHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred HHHHHHHHHHHh----CC---CcEEEeCCHH-HHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 346666666664 52 2456665555 999999999999999999999999987764 45689999999863
Q ss_pred CCCCCcCCHHHHHhhhccCC-cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 210 ISENFLLDPKVLESKLTEKS-RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~-~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
|++++++++++++ ++|++++|+||||.+++ +++|+++|++| ++++|+|++|...... .+ ..
T Consensus 188 -------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~-g~~livD~a~~~~~~~----~~-~~-- 249 (445)
T 1qgn_A 188 -------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEK-GALVCIDGTFATPLNQ----KA-LA-- 249 (445)
T ss_dssp -------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTCTTTC----CT-TT--
T ss_pred -------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCCcccccC----Cc-cc--
Confidence 8999999999899 99999999999999999 88999999999 9999999999854221 11 11
Q ss_pred CCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRER 367 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~ 367 (471)
.+..+++.|+||.+|..| .++||+++++++++.+......+..+++++...++...++ .+....+++.++
T Consensus 250 --~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~-------~l~~r~~~~~~~ 320 (445)
T 1qgn_A 250 --LGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMK-------TLHLRVQQQNST 320 (445)
T ss_dssp --TTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGG-------GHHHHHHHHHHH
T ss_pred --cCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHH-------HHHHHHHHHHHH
Confidence 345699999999997444 3799999999999988876665555566666555544443 244455666777
Q ss_pred HHHHHHHhcCCCCC-eeeCC----------------CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC
Q 012095 368 RDFLVKSFGELEGV-KMSEP----------------QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP 430 (471)
Q Consensus 368 r~~l~~~L~~~~g~-~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p 430 (471)
++.+.+.|++.|++ .+..| ..+.++++.++... .+...+.+.| +..++.+..
T Consensus 321 a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----------~~~~~~l~~l-~~~~i~~s~ 389 (445)
T 1qgn_A 321 ALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----------LTTAKFVDAL-KIPYIAPSF 389 (445)
T ss_dssp HHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----------HHHHHHHHHC-SSSEECSCC
T ss_pred HHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----------HHHHHHHHhC-CCceEeccC
Confidence 88889999888777 44433 12334677776310 0234455543 223677777
Q ss_pred CCCC----------------------CC-CCcEEEEeecCHHHHHHHHHHHHHHHHh
Q 012095 431 GDAF----------------------GD-DTCIRISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 431 g~~f----------------------~~-~~~iRis~~~~~e~i~~~~~~l~~~l~~ 464 (471)
|+.+ |. ++.||+|++. |+++++++.|+++++.
T Consensus 390 G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 390 GGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp CSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 7643 22 4789999994 5788999999888864
No 194
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=8.8e-28 Score=241.78 Aligned_cols=284 Identities=15% Similarity=0.132 Sum_probs=211.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEe
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVIL 206 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v 206 (471)
.+...+|++.+++++ | .+++++++|+++++..++++++++||.|++++|+|.++...+ +..|.+++.+
T Consensus 65 ~~~~~~l~~~la~~~----g----~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 136 (392)
T 3qhx_A 65 NPTRTALEAALAAVE----D----AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV 136 (392)
T ss_dssp CHHHHHHHHHHHHHT----T----CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred ChHHHHHHHHHHHHh----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence 344556677776664 3 247899999999999999999999999999999998877665 6789999999
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccccc
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFAS 286 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 286 (471)
+.+ |++++++++++++++|++++|+||||.+.+ +++|+++|++| ++++|+|++|....... . ..
T Consensus 137 ~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-g~~li~D~~~~~~~~~~----~-~~ 200 (392)
T 3qhx_A 137 ALA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADS-SAKVLVDNTFASPALQQ----P-LS 200 (392)
T ss_dssp CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECTTTCTTTCC----G-GG
T ss_pred CCC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHc-CCEEEEECCCcccccCC----h-HH
Confidence 863 899999999999999999999999999999 99999999999 99999999998542211 1 11
Q ss_pred CCCCCCceEEEecCCcccCccc-hhheeeEcC-HHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHH
Q 012095 287 LPGMWERTLTVNGFSKAFAMTG-WRLGYIAGP-KHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAF 364 (471)
Q Consensus 287 ~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~-~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~ 364 (471)
.+..+++.|+||.+|.+| .|+||++++ +++++.+.......+.+++++.+.++...++. +....++.
T Consensus 201 ----~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------l~~~~~~~ 269 (392)
T 3qhx_A 201 ----LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-------LVLRMQRH 269 (392)
T ss_dssp ----GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHHHHHH
T ss_pred ----hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-------HHHHHHHH
Confidence 245599999999998767 799999997 68989888877777778888888887777653 33445566
Q ss_pred HHHHHHHHHHhcCCCCCeee-CCC----------------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEE
Q 012095 365 RERRDFLVKSFGELEGVKMS-EPQ----------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVA 427 (471)
Q Consensus 365 ~~~r~~l~~~L~~~~g~~~~-~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~ 427 (471)
.++++.+.+.|++.+++... .|. .|..+++.++... .....|.+.| +..++.
T Consensus 270 ~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----------~~~~~~~~~l-~~~~~~ 338 (392)
T 3qhx_A 270 SENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----------TAAEQLCAKT-NIFILA 338 (392)
T ss_dssp HHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----------HHHHHHHHHC-SSSEEC
T ss_pred HHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----------HHHHHHHHhC-CCceEC
Confidence 67777788888887665332 221 1334778886410 1345666654 345777
Q ss_pred EECCCCCC--------------------CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 428 LVPGDAFG--------------------DDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 428 v~pg~~f~--------------------~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
+..|+.+. .++.||||++.. +.++.++.|.+++
T Consensus 339 ~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e--~~~~~i~~l~~al 391 (392)
T 3qhx_A 339 ESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIE--DVADLLDDLKQAL 391 (392)
T ss_dssp SCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred CCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 77776532 246799999972 3344445554443
No 195
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.96 E-value=5.1e-28 Score=250.44 Aligned_cols=331 Identities=13% Similarity=0.085 Sum_probs=240.7
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-------CCcEEEeCChHHHHHHHHHHhcCC----
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYT-------PDQILVSNGAKQSILQAVLAVCSP---- 178 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------~~~i~it~G~~~al~~~~~~l~~~---- 178 (471)
|..+.+++..++......|...++..++++.+++++.+.+|.+.+ ..++++|+|+++++..++.++.++
T Consensus 87 ~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~ 166 (486)
T 1js3_A 87 PAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRR 166 (486)
T ss_dssp HHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhh
Confidence 456778888887665667777777889999999999999997532 257899999999998888765421
Q ss_pred -----CC--------e--EEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCc------EEEEcCC
Q 012095 179 -----GD--------E--VIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSR------LLILCSP 237 (471)
Q Consensus 179 -----gd--------~--Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~------~i~i~~p 237 (471)
|| . |++++++|.++...++..|++++.+|++ .++.+|+++|+++++++++ +|++++|
T Consensus 167 ~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~ 244 (486)
T 1js3_A 167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVATLG 244 (486)
T ss_dssp HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 43 3 7889999999999999999999999985 4678999999999976653 7788999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccc-cccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTS-FASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
+||||.+-+ +++|+++|++| ++++++|++|+.+.+....... +..+. +-..++.+++|.++++ +++||+++
T Consensus 245 ~n~tG~~~~---l~~I~~la~~~-~~~lhvD~a~g~~~~~~~~~~~~~~g~~---~adsi~~~~hK~~~~p-~~~G~l~~ 316 (486)
T 1js3_A 245 TTSCCSFDN---LLEVGPICHEE-DIWLHVDAAYAGSAFICPEFRHLLNGVE---FADSFNFNPHKWLLVN-FDCSAMWV 316 (486)
T ss_dssp CTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTGGGGGGSTTTGGGGTTGG---GCSEEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCCCCC---HHHHHHHHHHc-CCEEEEehhhHHHHHHCHHHHHHhcCcc---ccCeeEEchhhhcCCC-cceEEEEE
Confidence 999999877 99999999999 9999999999976542211111 11121 2225567899999855 89999998
Q ss_pred CHH-H-HHHHHH----HHh--c--------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 317 PKH-F-VAACNK----IQS--Q--------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 317 ~~~-~-i~~l~~----~~~--~--------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
+++ . .+.+.. +.. . .+.....+.+.++...+. .++++++.+++.++++++.+.
T Consensus 317 ~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~ 391 (486)
T 1js3_A 317 KRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG-----VKGLQAYIRKHVQLSHEFEAF 391 (486)
T ss_dssp SCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHH
Confidence 643 2 333311 000 0 000123455555555543 467888899999999999999
Q ss_pred hcCCCCCeee-CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHH
Q 012095 375 FGELEGVKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTT 450 (471)
Q Consensus 375 L~~~~g~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~ 450 (471)
|.+++|+++. +|..+++.| +++..- ....++.++|.+++.+++.+ ..++..+++|++++. ++++
T Consensus 392 L~~~~~~~~~~~~~~~~v~f-~~~~~~----------~~~~~l~~~L~~~g~~~~~~-~~~~~~~~lRi~~~~~~~t~~d 459 (486)
T 1js3_A 392 VLQDPRFEVCAEVTLGLVCF-RLKGSD----------GLNEALLERINSARKIHLVP-CRLRGQFVLRFAICSRKVESGH 459 (486)
T ss_dssp HHHCTTEEECSCCCSSEEEE-EESSCH----------HHHHHHHHHHHHHTSCBCEE-EEETTEEEEEEECCCTTCCHHH
T ss_pred HhcCCCeEEeCCCceeEEEE-EecChH----------HHHHHHHHHHHhcCCEEEEE-EEECCEEEEEEEeCCCCCCHHH
Confidence 9998899886 466676554 554210 02477888888774344444 335556799999864 7899
Q ss_pred HHHHHHHHHHHHHhhCC
Q 012095 451 LQAAVERIKKGLLTLRP 467 (471)
Q Consensus 451 i~~~~~~l~~~l~~~~~ 467 (471)
+++++++|+++++++..
T Consensus 460 i~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 460 VRLAWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999876543
No 196
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=2.4e-27 Score=236.77 Aligned_cols=307 Identities=16% Similarity=0.183 Sum_probs=224.1
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~ 188 (471)
++.+.+++.+.+..+ .|++..+..++++.++++++ .+++++++|+++++..++.++ +++||+|+++.|+
T Consensus 16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~ 85 (373)
T 3frk_A 16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNT 85 (373)
T ss_dssp HHHHHHHHHHHHHHT--CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTS
T ss_pred CHHHHHHHHHHHHCC--CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCC
Confidence 567788888877664 46677788999999999973 248999999999999999999 8999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 189 y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
|.++...++..|++++.+++++ +++.+|++++++++++++++|+ |+||||...+ +++|.++|++| ++++|+|
T Consensus 86 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~---l~~i~~l~~~~-~~~li~D 157 (373)
T 3frk_A 86 FIATALAVSYTGAKPIFVEPDI-RTYNIDPSLIESAITEKTKAII---AVHLYGQPAD---MDEIKRIAKKY-NLKLIED 157 (373)
T ss_dssp CTHHHHHHHHHSCEEEEECEET-TTTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---HHHHHHHHHHH-TCEEEEE
T ss_pred cHHHHHHHHHcCCEEEEEeccc-cccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---HHHHHHHHHHc-CCEEEEE
Confidence 9999999999999999999875 3578999999999988888887 7889999998 88999999999 9999999
Q ss_pred cCCCccc-cCCCCccccccCCCCCCceEEEecCC--cccCccchhheeeEcC-HHHHHHHHHHHhcc------------c
Q 012095 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGFS--KAFAMTGWRLGYIAGP-KHFVAACNKIQSQF------------T 332 (471)
Q Consensus 269 e~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~g~~G~R~G~v~~~-~~~i~~l~~~~~~~------------~ 332 (471)
++|..+. +++. ....+ ..+.+.||| |.++..| +.|+++++ +++++.+....... +
T Consensus 158 ~a~~~g~~~~~~---~~~~~-----~d~~~~S~~~~K~l~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 228 (373)
T 3frk_A 158 AAQAHGSLYKGM---KVGSL-----GDAAGFSFYPAKNLGSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFN 228 (373)
T ss_dssp CTTCTTCEETTE---ETTSS-----SSEEEEECCTTSSSCCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCB
T ss_pred CCcccCCEECCE---ecccc-----ccEEEEeCcCCCccCccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCcccccccc
Confidence 9998633 2221 11111 137888887 8886324 47888876 56777777654421 2
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCcceEEe--EecCCccCCcccCCCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQGAFYLF--IDFSTYYGSEAEGFGK 409 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~g~~~~--~~~~~~~~~~~~~~~~ 409 (471)
+..+.+...++...+. .+++..++.++.++++.+.|.+++ +.+.. +.+....| +.+..
T Consensus 229 ~~~~~~~aa~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----------- 289 (373)
T 3frk_A 229 SRLDELQAGFLRVKLK-------YLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----------- 289 (373)
T ss_dssp CCCCHHHHHHHHHHHH-------THHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE-----------
T ss_pred CCCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe-----------
Confidence 2234444443333332 345666777788888899998874 55432 22221111 12211
Q ss_pred CCCHHHHHHHHHHcCCEEEECCCCCC-----------C------------CCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 410 IENSESLCRYLLDKAQVALVPGDAFG-----------D------------DTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 410 ~~~~~~l~~~Ll~~~gV~v~pg~~f~-----------~------------~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
.+..++.+.|.++ ||.+.++.... . .+.+|+++.. +++|++++++.|+++..+
T Consensus 290 -~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~ 367 (373)
T 3frk_A 290 -EKRDELQKYLNNN-GIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLE 367 (373)
T ss_dssp -SSHHHHHHHHHHT-TBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC--
T ss_pred -CCHHHHHHHHHHC-CCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhh
Confidence 1577888888776 99998765211 0 1469999987 999999999998876543
No 197
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=3.5e-27 Score=235.24 Aligned_cols=302 Identities=18% Similarity=0.241 Sum_probs=225.6
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCC
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPF 188 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~ 188 (471)
++++.+++.+.+..+ .|.+..+..++++.++++++ .+++++++|+++++..++.++ +++||+|+++.|+
T Consensus 15 ~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~ 84 (367)
T 3nyt_A 15 KDKIDAGIQRVLRHG--QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITPGFT 84 (367)
T ss_dssp HHHHHHHHHHHHHHC--CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred CHHHHHHHHHHHhcC--CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCc
Confidence 567888888877664 56677788999999999873 248999999999999999999 8999999999999
Q ss_pred CCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 189 WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 189 y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
|.++...++..|++++.++++++ ++.+|++++++++++++++|+ |+||||...+ +++|.++|++| +++||+|
T Consensus 85 ~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~-~~~li~D 156 (367)
T 3nyt_A 85 YVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKY-GIPVIED 156 (367)
T ss_dssp CTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHT-TCCBEEE
T ss_pred cHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHc-CCEEEEE
Confidence 99999999999999999998754 478999999999988888877 8889999888 88999999999 9999999
Q ss_pred cCCCccc-cCCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEc-CHHHHHHHHHHHhc------------cc
Q 012095 269 EIYEHII-YAPATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQSQ------------FT 332 (471)
Q Consensus 269 e~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~------------~~ 332 (471)
++|..+. +++. .+..+ + .+++.|| +|.++.+|. .||+++ ++++++.+...... ++
T Consensus 157 ~a~~~g~~~~~~---~~~~~----~-di~~~Sf~~~K~l~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~ 227 (367)
T 3nyt_A 157 AAQSFGASYKGK---RSCNL----S-TVACTSFFPSAPLGCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVN 227 (367)
T ss_dssp CTTTTTCEETTE---ETTSS----S-SEEEEECCTTSSSCCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCB
T ss_pred CccccCCeECCe---eccCC----C-CEEEEECCCCCcCCCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcC
Confidence 9998532 3321 11111 1 4888897 899985476 899888 57788888776542 24
Q ss_pred CCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC-CCc---ceE-EeEecCCccCCcccCC
Q 012095 333 SGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSE-PQG---AFY-LFIDFSTYYGSEAEGF 407 (471)
Q Consensus 333 ~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~-p~~---g~~-~~~~~~~~~~~~~~~~ 407 (471)
+..+.+.+.++...++. +++..++.++.++++.+.|.++ |+.+.. +.+ .++ +++.++
T Consensus 228 ~~~~~~~aa~~~~~l~~-------~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 289 (367)
T 3nyt_A 228 SRLDTLQAAILLPKLEI-------FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD---------- 289 (367)
T ss_dssp CCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----------
T ss_pred CCccHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----------
Confidence 55677766666665553 3445556666777777888776 444322 121 121 233332
Q ss_pred CCCCCHHHHHHHHHHcCCEEEECCCC--------CC-C-----------CCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 408 GKIENSESLCRYLLDKAQVALVPGDA--------FG-D-----------DTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 408 ~~~~~~~~l~~~Ll~~~gV~v~pg~~--------f~-~-----------~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
+..++.+.|.++ ||.+.++.. |. . ...+|+++.. ++++++.+++.|+++
T Consensus 290 ----~~~~l~~~L~~~-GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 ----NRESVQASLKAA-GVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp ----SHHHHHHHHHHH-TCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ----CHHHHHHHHHHC-CCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 567888887766 998887653 11 0 1368999886 899999999988765
No 198
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=5.6e-27 Score=243.71 Aligned_cols=341 Identities=14% Similarity=0.118 Sum_probs=242.7
Q ss_pred hHHH-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC--------CC-
Q 012095 110 PVLI-AEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS--------PG- 179 (471)
Q Consensus 110 p~~v-~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~--------~g- 179 (471)
|..+ .+.+...+......|...++..++++.+.+++.+.+|.+.+.+++++|+|+++++..++.++.+ +|
T Consensus 105 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~ 184 (504)
T 2okj_A 105 IIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 184 (504)
T ss_dssp HHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 4444 3455544444445676666778899999999999999754478999999999999998888753 56
Q ss_pred ----C-eEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCC
Q 012095 180 ----D-EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 180 ----d-~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~ 245 (471)
+ .|+++++.|+++...++.+|. +++.+|++ .++.+|+++|++++++ ++++|++++|+||||.+.
T Consensus 185 ~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~ 262 (504)
T 2okj_A 185 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD 262 (504)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC
T ss_pred cccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC
Confidence 6 799999999999999999887 89999985 3578999999999975 588999999999999998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH-HHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAAC 324 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l 324 (471)
+ +++|+++|++| ++++++|++|..+.+....... .+.+.....+++.+++|.++.| .++|++++++ ++++..
T Consensus 263 ~---l~~I~~la~~~-g~~lhvD~a~~~~~~~~~~~~~--~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~ 335 (504)
T 2okj_A 263 P---IQEIADICEKY-NLWLHVDAAWGGGLLMSRKHRH--KLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGC 335 (504)
T ss_dssp C---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHH
T ss_pred C---HHHHHHHHHHc-CCEEEEehhhhhHHHhCHhhHh--hcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHH
Confidence 8 99999999999 9999999999987653221111 1221113347788999999844 7899999875 465543
Q ss_pred HHHHhcccC---------------------CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCee
Q 012095 325 NKIQSQFTS---------------------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKM 383 (471)
Q Consensus 325 ~~~~~~~~~---------------------~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~ 383 (471)
......+.. ....+.+.++..++. .+.++++.++..++++++.+.|++++|+++
T Consensus 336 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~ 410 (504)
T 2okj_A 336 NQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEM 410 (504)
T ss_dssp HCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred hcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 211111110 013566666666664 456888888999999999999999889988
Q ss_pred eC---CCcceEEeEecCCccCCcccC----CCCCCCHHHHHHHHHHcCCEEEECCCCCCC-CCcEEEEee---cCHHHHH
Q 012095 384 SE---PQGAFYLFIDFSTYYGSEAEG----FGKIENSESLCRYLLDKAQVALVPGDAFGD-DTCIRISYA---ASLTTLQ 452 (471)
Q Consensus 384 ~~---p~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~-~~~iRis~~---~~~e~i~ 452 (471)
.. |..++++|...+........+ ........++.+.|.+++.+.+.++. +.. .+++|++++ .++++++
T Consensus 411 ~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~-~~~~~~~lRis~~~~~~t~edi~ 489 (504)
T 2okj_A 411 VFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQP-QGDKANFFRMVISNPAATQSDID 489 (504)
T ss_dssp SSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEE-ETTEEEEEEECCCCTTCCHHHHH
T ss_pred EecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeE-ECCceEEEEEEeCCCCCCHHHHH
Confidence 74 777877765544311000000 00000135788888887334444332 332 368999997 3889999
Q ss_pred HHHHHHHHHHHhh
Q 012095 453 AAVERIKKGLLTL 465 (471)
Q Consensus 453 ~~~~~l~~~l~~~ 465 (471)
+++++|+++++++
T Consensus 490 ~~~~~l~~~~~~~ 502 (504)
T 2okj_A 490 FLIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 199
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=2.9e-26 Score=234.08 Aligned_cols=320 Identities=15% Similarity=0.152 Sum_probs=227.6
Q ss_pred CCCeEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHH
Q 012095 94 GVSVIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVL 173 (471)
Q Consensus 94 g~~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 173 (471)
|+++|.|+ .|++ ++++.+++.+++... .|.+..+..++++.++++++ . +++++++++++++..++.
T Consensus 30 ~~~~i~~~--~~~~--~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~g----~----~~~i~~~sGt~a~~~al~ 95 (437)
T 3bb8_A 30 GKSVVPPS--GKVI--GTKELQLMVEASLDG--WLTTGRFNDAFEKKLGEYLG----V----PYVLTTTSGSSANLLALT 95 (437)
T ss_dssp TTSCBCSC--CCCC--CHHHHHHHHHHHHHC--CCBSCHHHHHHHHHHHHHHT----C----SEEEEESCHHHHHHHHHH
T ss_pred CCccccCC--CCCC--CHHHHHHHHHHHHcC--CcCCChHHHHHHHHHHHHHC----C----CcEEEeCCHHHHHHHHHH
Confidence 44456664 3333 457788888887653 46577788999999999873 2 267788888899999999
Q ss_pred Hh---------cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC-CCCCccc
Q 012095 174 AV---------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS-PSNPTGS 243 (471)
Q Consensus 174 ~l---------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~-p~NPtG~ 243 (471)
++ +++||+|+++.|+|+++...++..|++++.+++++ +++.+|++++++++++++++|++++ |+||
T Consensus 96 ~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~g~~--- 171 (437)
T 3bb8_A 96 ALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDVDI-PTYNVNASLIEAAVSDKTKAIMIAHTLGNL--- 171 (437)
T ss_dssp HTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCEET-TTTEECGGGHHHHCCTTEEEEEEECGGGCC---
T ss_pred HhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEeccC-ccCCcCHHHHHHhcCCCCeEEEEeCCCCCh---
Confidence 98 78999999999999999999999999999999875 3578999999999988899999874 4444
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHH
Q 012095 244 VYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA 322 (471)
Q Consensus 244 ~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~ 322 (471)
.+ +++|.++|+++ ++++|+|++|.... +++ ..+... ..+++.||+|.++++|.|.||++++++.+.
T Consensus 172 -~~---~~~i~~l~~~~-~~~li~D~a~~~g~~~~~------~~~~~~--~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~ 238 (437)
T 3bb8_A 172 -FD---LAEVRRVADKY-NLWLIEDCCDALGSTYDG------KMAGTF--GDIGTVSFYPAKHITMGEGGAVFTQSAELK 238 (437)
T ss_dssp -CC---HHHHHHHHHHH-TCEEEEECTTCTTCEETT------EETTSS--SSEEEEECSTTSSSCCSSCEEEEESCHHHH
T ss_pred -hc---HHHHHHHHHHc-CCEEEEECccccCceECC------eecccc--cCEEEEECcCCcCCCCCCeEEEEeCCHHHH
Confidence 56 89999999999 99999999998532 211 111111 127788999998899999999999866544
Q ss_pred H-HHHHHhc---------------------------------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 323 A-CNKIQSQ---------------------------------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 323 ~-l~~~~~~---------------------------------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
. +...... ++...+.+...++.+.|+. +.+..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-------~~~~~~ 311 (437)
T 3bb8_A 239 SIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-------IEEFVE 311 (437)
T ss_dssp HHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-------HHHHHH
T ss_pred HHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-------HHHHHH
Confidence 3 3322110 0112345555555555542 234444
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCCC------c--ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCC
Q 012095 363 AFRERRDFLVKSFGELEGVKMSEPQ------G--AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAF 434 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~~g~~~~~p~------~--g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f 434 (471)
+.+++++++.+.|.+++|+...+.. + .|.+.++.+.. .+..++.+.|.++ ||.+.++...
T Consensus 312 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~L~~~-GI~v~~~~~~ 379 (437)
T 3bb8_A 312 KRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSG-----------VSRIDLVKFLDEA-KVGTRLLFAG 379 (437)
T ss_dssp HHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGS-----------SCHHHHHHHHHHT-TBCCBCCTTS
T ss_pred HHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCc-----------CcHHHHHHHHHHC-CCceeccCCc
Confidence 5577788899999988776554311 1 22233444311 1677899988775 9999887541
Q ss_pred C--------------C----------CCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 435 G--------------D----------DTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 435 ~--------------~----------~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
. . .+.+||++.. ++++++++++.|+++++
T Consensus 380 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 380 NLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp SGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred ccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 1 0 0139999887 89999999999988764
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=2.1e-27 Score=239.08 Aligned_cols=285 Identities=14% Similarity=0.119 Sum_probs=202.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~ 205 (471)
+..+..++|+.+++++ |. ++.++++++++++..+++ ++++||+|+++.|.|++... .++..|++++.
T Consensus 53 ~~~~~~~lr~~la~~~----g~----~~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 123 (393)
T 1n8p_A 53 QNPNRENLERAVAALE----NA----QYGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSF 123 (393)
T ss_dssp CCHHHHHHHHHHHHHT----TC----SEEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEE
T ss_pred CChhHHHHHHHHHHHh----CC----CcEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 3445678888888875 32 256666666999999999 89999999999999985444 34667999999
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCC---CeEEEEccCCCccccCCCCcc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHP---RLLVLSDEIYEHIIYAPATHT 282 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~---~~~ii~De~y~~~~~~~~~~~ 282 (471)
++++ | +++++++++++++|++++|+||||.+++ +++|.++|++|+ ++++|+|++|..+.+.
T Consensus 124 v~~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~----- 187 (393)
T 1n8p_A 124 TNDL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS----- 187 (393)
T ss_dssp ESSH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-----
T ss_pred eCCC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC-----
Confidence 9863 7 8999999888999999999999999999 889999999873 7999999999986552
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhh-eeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRL-GYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKM 360 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~-G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~ 360 (471)
....+ +.++++.|+||.+|.+|+|+ ||+++ ++++++.+......+...++++.+.++...++. +...
T Consensus 188 ~~~~~----~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-------~~~~ 256 (393)
T 1n8p_A 188 NPLNF----GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-------LHLR 256 (393)
T ss_dssp CGGGG----TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-------HHHH
T ss_pred CHHHc----CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-------HHHH
Confidence 11222 45699999999999899999 99998 488999888776655556677776666555543 3444
Q ss_pred HHHHHHHHHHHHHHhcCCCC-Cee-eCC---------------Cc---ceEEeEecCCccCCcccCCCCCCCHHHHHHHH
Q 012095 361 VKAFRERRDFLVKSFGELEG-VKM-SEP---------------QG---AFYLFIDFSTYYGSEAEGFGKIENSESLCRYL 420 (471)
Q Consensus 361 ~~~~~~~r~~l~~~L~~~~g-~~~-~~p---------------~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 420 (471)
.+...++++.+.+.|.+.+. +.. ..| .+ +..+++.++... .+...+.+.|
T Consensus 257 ~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----------~~~~~~l~~l 326 (393)
T 1n8p_A 257 VRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----------EAASKFASST 326 (393)
T ss_dssp HHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----------HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----------HHHHHHHhhC
Confidence 55556667777777777644 332 111 11 445778886310 1344555543
Q ss_pred HHcCCEEEECCC----------CC------------CC-CCcEEEEeec--CHHHHHHHHHHHHHH
Q 012095 421 LDKAQVALVPGD----------AF------------GD-DTCIRISYAA--SLTTLQAAVERIKKG 461 (471)
Q Consensus 421 l~~~gV~v~pg~----------~f------------~~-~~~iRis~~~--~~e~i~~~~~~l~~~ 461 (471)
+..++.+..|+ .+ |. ++.||+|++. ++++++.+.+.|+++
T Consensus 327 -~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 327 -RLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp -SSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred -CcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 22345444332 22 11 3689999998 556677777776654
No 201
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.95 E-value=4e-27 Score=240.53 Aligned_cols=335 Identities=17% Similarity=0.199 Sum_probs=227.7
Q ss_pred HHHHHHHHHHhcCCC--eEEcCCCCCCCCChHHHHHHHH--HHHHcCCCCCCC-----CCCCHHHHHHHHHHHHHHhCCC
Q 012095 82 AITDQATALAQAGVS--VIRLAAGEPDFDTPVLIAEAGI--NAIREGFTRYTP-----NAGTLELRSAICHKLKEENGLS 152 (471)
Q Consensus 82 ~~~~~~~~~~~~g~~--~i~l~~g~~~~~~p~~v~~a~~--~~~~~~~~~Y~~-----~~G~~~lr~~ia~~~~~~~g~~ 152 (471)
++......+.+.+.. ...++.|.++...|+.+.+.+. +.+ ..|+| .+|..++.+.+.+.+.+.+|.
T Consensus 49 ~~~~~~~~l~~~~~~~~~~~~~~g~~~~~~p~~v~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~- 123 (438)
T 1wyu_A 49 KVLEELRRLAAQNLPAHKAFLGGGVRSHHVPPVVQALAARGEFL----TAYTPYQPEVSQGVLQATFEYQTMIAELAGL- 123 (438)
T ss_dssp HHHHHHHHHHHTSCCCTTCCCCSSCCCCCCCHHHHHHHTSHHHH----HCCSCCSGGGCHHHHHHHHHHHHHHHHHHTS-
T ss_pred HHHHHHHHHHhcCcCccccccCCCccCCcCcHHHHHHHhcchhh----hcCCCCcchhhhhHHHHHHHHHHHHHHHhCC-
Confidence 444444555444432 4578888888877877744442 222 23444 457777788888888888885
Q ss_pred CCCCcEEEeCChHHHHHHHHHH-hcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 153 YTPDQILVSNGAKQSILQAVLA-VCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~-l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+++++++++|++.++..+..+ .+++||+|++++++|+++...+ +..|++++.++.. ++.+|+++ +++
T Consensus 124 -~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~---~~~~d~~~----i~~ 195 (438)
T 1wyu_A 124 -EIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLE---GGRTPLPE----VGE 195 (438)
T ss_dssp -SEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCB---TTBCCCCC----CCT
T ss_pred -CccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCc---CCccCHHH----hCC
Confidence 567899999999443333333 2478999999999999988655 4589999999872 34678776 677
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC---CCccccCCCCccccccCCCCCCceEEEecCCccc
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI---YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAF 304 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~---y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 304 (471)
++++|++++| ||||.+.+ +++|+++|++| ++++++|-. |+.+ ..+ .. .+..+++.| +|.|
T Consensus 196 ~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~-g~~vivd~d~~a~g~~-----~~~--~~----~g~D~~~~s-~kk~ 258 (438)
T 1wyu_A 196 EVGAVVVQNP-NFLGALED---LGPFAEAAHGA-GALFVAVADPLSLGVL-----KPP--GA----YGADIAVGD-GQSL 258 (438)
T ss_dssp TEEEEEEESS-CTTSBCCC---HHHHHHHHHHT-TCEEEEECCTTGGGTB-----CCH--HH----HTCSEEEEE-CTTT
T ss_pred CeEEEEEECC-CCCeEEec---HHHHHHHHHHc-CCEEEEEechhhccCc-----CCC--cc----CCCCEEEEC-Cccc
Confidence 8999999999 99999998 99999999999 999996522 3221 111 11 122355665 5554
Q ss_pred ----CccchhheeeEcCHHHHHHHHHH-------------------------H-hcccCCC---ChHHHHHHHHHHhccC
Q 012095 305 ----AMTGWRLGYIAGPKHFVAACNKI-------------------------Q-SQFTSGA---SSISQKAGVAALGLGY 351 (471)
Q Consensus 305 ----g~~G~R~G~v~~~~~~i~~l~~~-------------------------~-~~~~~~~---~~~~q~aa~~~L~~~~ 351 (471)
++.|+|+||+++++++++.+... + ...+.+. +.+...++..++...
T Consensus 259 ~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~- 337 (438)
T 1wyu_A 259 GLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAAL- 337 (438)
T ss_dssp TCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHH-
T ss_pred CCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHh-
Confidence 46778999999998877654110 0 1112222 222222222223210
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEE--E
Q 012095 352 AGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL--V 429 (471)
Q Consensus 352 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v--~ 429 (471)
..+.++++.+++.++++++.+.|++++|+++..+. .+|.++.+... .+..+++++|.++ ||.+ .
T Consensus 338 -~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~-----------~~~~~~~~~L~~~-gi~v~~~ 403 (438)
T 1wyu_A 338 -GPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPK-PFFNEFALALP-----------KDPEAVRRALAER-GFHGATP 403 (438)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCS-SBCSEEEEECS-----------SCHHHHHHHHHHT-TCCCCEE
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCC-CeEEEEEEeCC-----------CCHHHHHHHHHHC-Cceeccc
Confidence 13557888999999999999999999899887654 34433333211 1678999998876 9998 7
Q ss_pred CCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 430 PGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 430 pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
+|..|. ++++|+++.. +++++++++++|++++
T Consensus 404 ~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 404 VPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp CCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred cccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 777554 7899999994 8899999999998764
No 202
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.95 E-value=8.8e-27 Score=241.82 Aligned_cols=336 Identities=13% Similarity=0.065 Sum_probs=243.0
Q ss_pred CChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEE---EeCChHHHHHHHHHHhcCC------
Q 012095 108 DTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQIL---VSNGAKQSILQAVLAVCSP------ 178 (471)
Q Consensus 108 ~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~---it~G~~~al~~~~~~l~~~------ 178 (471)
.+++.+.+++.+++.....+|...++..++++.+.+++.+.+|.+.++++++ +|+|+++++..++.++..+
T Consensus 67 ~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~ 146 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (502)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHH
Confidence 3467888888888766555565566678999999999999999765455554 4899999999888887655
Q ss_pred --CC-----eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHH
Q 012095 179 --GD-----EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLD 251 (471)
Q Consensus 179 --gd-----~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~ 251 (471)
|| +|++++++|.++...++..|++++.||++. +++.+|+++|++++++++++|++++|+||||.+.+ ++
T Consensus 147 ~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~ 222 (502)
T 3hbx_A 147 AEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVMDPQQAVDMVDENTICVAAILGSTLNGEFED---VK 222 (502)
T ss_dssp HTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HH
T ss_pred hcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HH
Confidence 76 899999999999999999999999999864 44789999999999999999999999999999999 88
Q ss_pred HHHHHHHhCC-----CeEEEEccCCCcccc---CCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC-HHHHH
Q 012095 252 EIARIVAKHP-----RLLVLSDEIYEHIIY---APATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP-KHFVA 322 (471)
Q Consensus 252 ~i~~l~~~~~-----~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~-~~~i~ 322 (471)
+|.++|++++ ++++++|++|..+.. .+..... +. ..+-.++..|.+|.++ .+.++||++.. ++.+.
T Consensus 223 ~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~---~~-~~~~D~v~~s~hK~l~-~p~g~G~~~~~~~~~l~ 297 (502)
T 3hbx_A 223 LLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWD---FR-LPLVKSINVSGHKYGL-VYAGIGWVIWRNKEDLP 297 (502)
T ss_dssp HHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS---TT-STTEEEEEEETTTTTC-CCSSCEEEEESSGGGSC
T ss_pred HHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccc---cC-CCCceEEEECcccccC-CCCCeEEEEEeCHHHhh
Confidence 8888888752 799999999986541 2211111 11 1244567778899874 77889988764 44432
Q ss_pred HHHHHHhcc----------cCCC---ChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC-Cc
Q 012095 323 ACNKIQSQF----------TSGA---SSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEP-QG 388 (471)
Q Consensus 323 ~l~~~~~~~----------~~~~---~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p-~~ 388 (471)
........+ ..+. ..+.+.++...+. .+.+.+..++..++++++.+.|.+++++++..+ ..
T Consensus 298 ~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~ 372 (502)
T 3hbx_A 298 EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG-----HEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEG 372 (502)
T ss_dssp GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSS
T ss_pred HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 211110011 0111 2333444444443 345677888888899999999999977988765 33
Q ss_pred ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC---CCCcEEEEeec--CHHHHHHHHHHHHHHHH
Q 012095 389 AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG---DDTCIRISYAA--SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 389 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~---~~~~iRis~~~--~~e~i~~~~~~l~~~l~ 463 (471)
..++++++++..+ .+..++.+.|.++ ||.+....... ...++|+++.. +.++++.+++.|+++++
T Consensus 373 ~~~v~f~~~~~~~---------~~~~~l~~~L~~~-Gi~v~~~~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~ 442 (502)
T 3hbx_A 373 VPLVAFSLKDSSC---------HTEFEISDMLRRY-GWIVPAYTMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMR 442 (502)
T ss_dssp SSEEEEEESSCSS---------CCHHHHHHHHHTT-TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCc---------CCHHHHHHHHHhC-CcEEeeccCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 3346667764210 2566899988765 88764332221 23589999986 88999999999999988
Q ss_pred hhCC
Q 012095 464 TLRP 467 (471)
Q Consensus 464 ~~~~ 467 (471)
+++.
T Consensus 443 ~l~~ 446 (502)
T 3hbx_A 443 ELDE 446 (502)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 7644
No 203
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.9e-26 Score=230.81 Aligned_cols=319 Identities=11% Similarity=0.114 Sum_probs=228.6
Q ss_pred cCCCCCCCCChHHHHHHHHHHHHcCCCC-CCCCCCCHHHHHHH-HHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-c
Q 012095 100 LAAGEPDFDTPVLIAEAGINAIREGFTR-YTPNAGTLELRSAI-CHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV-C 176 (471)
Q Consensus 100 l~~g~~~~~~p~~v~~a~~~~~~~~~~~-Y~~~~G~~~lr~~i-a~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l-~ 176 (471)
+..|.|++++++.+.+++.+++..+... |+ ....+|++++ ++++ | ..+++++++|+++++..++.++ +
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~~~~~~--~~~~~l~~~~~a~~~----g---~~~~~v~~~sgt~al~~al~~l~~ 75 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHIYTNYG--PINQRFEQTIMSGFF----Q---NRGAVTTVANATLGLMAAIQLKKR 75 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTCCSSSC--HHHHHHHHHHHHHTS----T---TCSEEEEESCHHHHHHHHHHHHSC
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCCcccCC--HHHHHHHHHHHHHHh----C---CCCeEEEeCCHHHHHHHHHHHcCC
Confidence 5667999999999999999998876533 33 3567889988 8875 3 2568999999999999999998 8
Q ss_pred CCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh-ccC--CcEEEEcCCCCCcccCCCHHHHHHH
Q 012095 177 SPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEK--SRLLILCSPSNPTGSVYPKNLLDEI 253 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l-~~~--~~~i~i~~p~NPtG~~~~~~~l~~i 253 (471)
+|||+|+++.|+|.++...++..|++++.+++++ ++|.+|++++++++ +++ +|+|+ |+||||...+ +++|
T Consensus 76 ~~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i 148 (377)
T 3ju7_A 76 KKGKYALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEY 148 (377)
T ss_dssp TTCCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHH
T ss_pred CCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHH
Confidence 9999999999999999999999999999999874 46889999999988 666 88777 7789999998 7888
Q ss_pred HHHHHhCCCeEEEEccCCCcccc-CCCCccccccCCCCCCceEEEecC--CcccCccchhheeeEc-CHHHHHHHHHHHh
Q 012095 254 ARIVAKHPRLLVLSDEIYEHIIY-APATHTSFASLPGMWERTLTVNGF--SKAFAMTGWRLGYIAG-PKHFVAACNKIQS 329 (471)
Q Consensus 254 ~~l~~~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~--SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~ 329 (471)
.++|+ | +++||+|++|..... .+. .+.+. ...+.+.|| +|.++ +| +.|++++ +++++++++.++.
T Consensus 149 ~~la~-~-~~~vi~D~a~a~g~~~~~~------~~g~~-~~d~~~~S~~~~K~l~-~g-~gG~~~~~~~~l~~~~~~~~~ 217 (377)
T 3ju7_A 149 EELEK-K-GVPVVVDAAPGFGLMNGGM------HYGQD-FSGMIIYSFHATKPFG-IG-EGGLIYSKNEEDIQRIKRMGN 217 (377)
T ss_dssp HHHHH-T-TCCBEEECTTCTTCEETTE------ETTTT-CSSEEEEECBTTSSSC-CB-SCEEEEESCHHHHHHHHHHTB
T ss_pred HHHHh-c-CCEEEEECCCccCCeECCE------eccCC-CCcEEEEECCCCCcCC-CC-CcEEEEECCHHHHHHHHHHHh
Confidence 99999 9 999999999986432 111 11000 012556665 59987 45 6788776 5778888877654
Q ss_pred c------------ccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCC--eeeCCCc--ce--E
Q 012095 330 Q------------FTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGV--KMSEPQG--AF--Y 391 (471)
Q Consensus 330 ~------------~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~--~~~~p~~--g~--~ 391 (471)
. +++..+.+.+.++...|+. ++...++.+++++++.+.|.+++++ .+..+.+ .+ |
T Consensus 218 ~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~-------l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T 3ju7_A 218 FGFDTNRECTMMGFNCKMSEYAAAIGIATMKK-------WDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQF 290 (377)
T ss_dssp TTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHT-------HHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSS
T ss_pred cCCCCCCceeeccccCCCCHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEE
Confidence 2 2445666665555555543 4455556666677777777776543 2222221 12 2
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCC--C------CC-------------CCcEEEEeec--CH
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDA--F------GD-------------DTCIRISYAA--SL 448 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~--f------~~-------------~~~iRis~~~--~~ 448 (471)
+.+.+++. .+.+++.+.|.++ ||.+..+.. . .. .+.+||.+.. ++
T Consensus 291 ~~~~~~~~-----------~~~~~l~~~L~~~-gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~ 358 (377)
T 3ju7_A 291 MPILCPEE-----------VRNKQVIEDLKKQ-KIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTK 358 (377)
T ss_dssp EEEECCTT-----------SCHHHHHHHHHTT-TBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCH
T ss_pred EEEEeCCh-----------hhHHHHHHHHHHC-CCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCH
Confidence 33445432 1467888887665 999887652 1 00 1369999986 89
Q ss_pred HHHHHHHHHHHHHHHh
Q 012095 449 TTLQAAVERIKKGLLT 464 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~ 464 (471)
++++++++.|++++..
T Consensus 359 ~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 359 EIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999887754
No 204
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=4.1e-26 Score=237.23 Aligned_cols=342 Identities=13% Similarity=0.104 Sum_probs=241.5
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcC------------
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCS------------ 177 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~------------ 177 (471)
+..+.+.+..++..+...|...++..++++.+++++.+.+|.+...+++++|+|+++++..++.++.+
T Consensus 109 ~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 109 IGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 44566777778777778898888999999999999999999876568999999999999988877654
Q ss_pred --CCCeEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhccC------CcEEEEcCCCCCcccCCC
Q 012095 178 --PGDEVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSPSNPTGSVYP 246 (471)
Q Consensus 178 --~gd~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~~------~~~i~i~~p~NPtG~~~~ 246 (471)
+++.|++++++|.++...++.+|. +++.++++ .++.+|+++|+++++++ +++|++++|+||||.+-+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 577899999999999999999998 89999986 35789999999999764 788999999999999987
Q ss_pred HHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH-HHHHHHH
Q 012095 247 KNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK-HFVAACN 325 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~-~~i~~l~ 325 (471)
+++|+++|++| ++++++|++|+........... .+.+...-.+++.+++|.++.+ ..+|+++.++ ++++...
T Consensus 267 ---l~~I~~ia~~~-~~~lhvD~a~~~~~~~~~~~~~--~~~g~~~aDsv~~~~hK~l~~p-~g~g~l~~~~~~~~~~~~ 339 (511)
T 3vp6_A 267 ---IQEIADICEKY-NLWLHVDAAWGGGLLMSRKHRH--KLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCN 339 (511)
T ss_dssp ---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHH
T ss_pred ---HHHHHHHHHHc-CCEEEEEccchhhHhhChhhhh--hccCCccCCEEEECcccccCCC-cCeEEEEEeCHHHHHHHh
Confidence 99999999999 9999999999875542211111 1111122346778999999744 6678887654 4555432
Q ss_pred HHHhccc-----------------C----CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 326 KIQSQFT-----------------S----GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 326 ~~~~~~~-----------------~----~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
.....+. . ....+...++..++. .++++++.++..++.+++.+.|+++||+++.
T Consensus 340 ~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g-----~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~ 414 (511)
T 3vp6_A 340 QMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG-----TVGFENQINKCLELAEYLYAKIKNREEFEMV 414 (511)
T ss_dssp CCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHSCTTEEES
T ss_pred ccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 1111000 0 012333444444442 5788999999999999999999999999886
Q ss_pred C---CCcceEEeEecCCccCCcccCC----CCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHH
Q 012095 385 E---PQGAFYLFIDFSTYYGSEAEGF----GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAA 454 (471)
Q Consensus 385 ~---p~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~ 454 (471)
. |..+.+.|.-.|.......... .......++.+.|++++.+.+......+..+++|++++. +.++|+.+
T Consensus 415 ~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~l 494 (511)
T 3vp6_A 415 FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFL 494 (511)
T ss_dssp SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHH
T ss_pred ecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHH
Confidence 5 6666654433333210000000 000013468888888843444321111223579999953 88999999
Q ss_pred HHHHHHHHHhh
Q 012095 455 VERIKKGLLTL 465 (471)
Q Consensus 455 ~~~l~~~l~~~ 465 (471)
++.|++..+++
T Consensus 495 l~~i~~~~~~~ 505 (511)
T 3vp6_A 495 IEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhh
Confidence 99998876543
No 205
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=3.5e-26 Score=232.10 Aligned_cols=284 Identities=16% Similarity=0.138 Sum_probs=198.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH----HHHHcCCEEEE
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE----MARIADATPVI 205 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~----~~~~~G~~~~~ 205 (471)
+.+...+|++.+++++ |. +..++++++++++..++++++++||+|++++|+|.++.. .++..|++++.
T Consensus 80 ~~p~~~~le~~lA~l~----g~----~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~ 151 (430)
T 3ri6_A 80 SNPTVEDLEQRLKNLT----GA----LGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRF 151 (430)
T ss_dssp CCHHHHHHHHHHHHHH----TC----SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHH----CC----CcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence 3445566777776664 42 345666666799999999999999999999999998887 66789999999
Q ss_pred ecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccc
Q 012095 206 LPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 285 (471)
Q Consensus 206 v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~ 285 (471)
++.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++ +++||+|++|....+. ...
T Consensus 152 v~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~-g~~livD~a~~~~~~~-----~~~ 215 (430)
T 3ri6_A 152 VDVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAK-GIPLVVDTTMTPPYLL-----EAK 215 (430)
T ss_dssp ECTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTT-TCCEEEECTTSCTTTC-----CGG
T ss_pred eCCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHc-CCEEEEECCCcccccC-----ChH
Confidence 9863 899999999999999999999999999999 88999999999 9999999999853321 111
Q ss_pred cCCCCCCceEEEecCCcccCccchhheeeEc---CHHH------------------HHHHHH-HHhcccCCCChHHHHHH
Q 012095 286 SLPGMWERTLTVNGFSKAFAMTGWRLGYIAG---PKHF------------------VAACNK-IQSQFTSGASSISQKAG 343 (471)
Q Consensus 286 ~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~---~~~~------------------i~~l~~-~~~~~~~~~~~~~q~aa 343 (471)
. .+..+++.|+||.++-+|..+|.+++ +..+ ++.+.. ........++++....+
T Consensus 216 ~----~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~ 291 (430)
T 3ri6_A 216 R----LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQ 291 (430)
T ss_dssp G----GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHH
T ss_pred H----cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 1 24459999999999756655554443 3212 233221 22233444555543333
Q ss_pred HHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCC----------------cceEEeEecCCccCCcccC
Q 012095 344 VAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQ----------------GAFYLFIDFSTYYGSEAEG 406 (471)
Q Consensus 344 ~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~----------------~g~~~~~~~~~~~~~~~~~ 406 (471)
... .+.+....++..+++..+.+.|++.|+++ +..|. ||+.+|+.++..
T Consensus 292 l~~-------l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~------- 357 (430)
T 3ri6_A 292 SLG-------LETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK------- 357 (430)
T ss_dssp HHH-------HHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-------
T ss_pred Hhh-------hhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-------
Confidence 332 34455666777888889999999988876 34444 674688888732
Q ss_pred CCCCCCHHHHHHHHHHcCCEEEECCCCCC-----------------------CCCcEEEEeecCHHHHHHHHHHHHHHH
Q 012095 407 FGKIENSESLCRYLLDKAQVALVPGDAFG-----------------------DDTCIRISYAASLTTLQAAVERIKKGL 462 (471)
Q Consensus 407 ~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~~e~i~~~~~~l~~~l 462 (471)
.+...|.+.|. -.++.+.+|..+. .+++||||++. |+.++.++.|++++
T Consensus 358 ----~~~~~~~~~l~-~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 358 ----EASYRFMDALK-LIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp ----HHHHHHHHHCS-SSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred ----HHHHHHHHhCC-cceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 14556666543 3467777777654 14689999987 23344445555544
No 206
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=4.5e-26 Score=230.52 Aligned_cols=213 Identities=12% Similarity=0.131 Sum_probs=164.2
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTR 209 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~ 209 (471)
..++++.+++++ | .+++++++|+++++..++.+++++||+|+++++.|.+....+ +..|++++.++.+
T Consensus 84 ~~~le~~lA~l~----g----~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~ 155 (415)
T 2fq6_A 84 HFSLQQAMCELE----G----GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL 155 (415)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred HHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC
Confidence 455666666664 4 246777889999999999999999999999999998877554 4579999998752
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHh--CCCeEEEEccCCCccccCCCCccccccC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASL 287 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~--~~~~~ii~De~y~~~~~~~~~~~~~~~~ 287 (471)
|++++++++++++++|++++|+||||.+++ +++|+++|++ | ++++|+|++|....+. .++ .
T Consensus 156 -------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~-g~~livD~a~a~~~~~----~p~-~- 218 (415)
T 2fq6_A 156 -------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVP-DAIIMIDNTWAAGVLF----KAL-D- 218 (415)
T ss_dssp -------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCT-TCEEEEECTTTTTTSS----CGG-G-
T ss_pred -------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcC-CCEEEEECCCcccccC----Ccc-c-
Confidence 889999999999999999999999999999 8999999999 9 9999999999864221 111 1
Q ss_pred CCCCCceEEEecCCcccCccchh-heeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHH
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRE 366 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R-~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~ 366 (471)
.+..+++.|++|.+|.+|.+ +||+++++++++.+...........+++...++...++ ++....++..+
T Consensus 219 ---~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~-------~l~~r~~~~~~ 288 (415)
T 2fq6_A 219 ---FGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLR-------TLGVRLRQHHE 288 (415)
T ss_dssp ---GTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHH-------HHHHHHHHHHH
T ss_pred ---cCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh-------HHHHHHHHHHH
Confidence 24569999999999977765 59999998888888776654454556655444433333 34555566677
Q ss_pred HHHHHHHHhcCCCCC
Q 012095 367 RRDFLVKSFGELEGV 381 (471)
Q Consensus 367 ~r~~l~~~L~~~~g~ 381 (471)
++..+.+.|.+.|++
T Consensus 289 n~~~l~~~L~~~~~v 303 (415)
T 2fq6_A 289 SSLKVAEWLAEHPQV 303 (415)
T ss_dssp HHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHcCCCe
Confidence 777788888776554
No 207
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.95 E-value=4.6e-27 Score=240.42 Aligned_cols=290 Identities=14% Similarity=0.106 Sum_probs=200.6
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 128 YTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 128 Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
|.+.....++++.+++ + |. + +++++|+|+++++..++++++++||+|++++|+|.++...+...|++++.++
T Consensus 53 ~~~~~~~~~~~~~la~-~----g~--~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~ 124 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-H----SD--Y-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIE 124 (446)
T ss_dssp TSCSSHHHHHHHHHCS-C----TT--E-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECE
T ss_pred cCcchHHHHHHHHHHh-c----CC--C-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEe
Confidence 3344445566666655 4 42 2 6899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC----CcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCc-cccCCCCcc
Q 012095 208 TRISEN----FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEH-IIYAPATHT 282 (471)
Q Consensus 208 ~~~~~~----~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~-~~~~~~~~~ 282 (471)
...+++ +.+|++++ ++++++++++++ +|+||.+++ +++|+++|++| +++||+||+|.. +.|.+. ..
T Consensus 125 ~~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~-~~~livDea~~~~~~f~~~-~~ 195 (446)
T 2x3l_A 125 THQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQL-NIPVLIDEAHGAHFGLQGF-PD 195 (446)
T ss_dssp EEECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHT-TCCEEEECTTCTTTTSTTS-CC
T ss_pred CeeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhc-CCeEEEcchhhhhhccCCC-CC
Confidence 832333 56788888 456899999988 556999999 88999999999 999999999986 435443 22
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHH--HHHHHHhcc-cCCCChHHHHHHHHHHhccCCChHH-HH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVA--ACNKIQSQF-TSGASSISQKAGVAALGLGYAGGEV-VS 358 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~--~l~~~~~~~-~~~~~~~~q~aa~~~L~~~~~~~~~-~~ 358 (471)
+..... ..+++.|+||.++ ++.++||+++++++++ .+......+ ..+++.....++.++++. ...+ .+
T Consensus 196 ~~~~~g----~Di~~~S~~K~l~-~~~g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~---l~~~g~~ 267 (446)
T 2x3l_A 196 STLNYQ----ADYVVQSFHKTLP-ALTMGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQF---YKTYDST 267 (446)
T ss_dssp CGGGGT----CSEEEECHHHHSS-SCTTCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH---HHHCCCH
T ss_pred ChHHcC----CCEEEECCccccc-cccccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHH---HHHhCHH
Confidence 332222 2389999999664 4445899999887654 333222222 233444333333333321 0111 11
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE-CCCCCCCC
Q 012095 359 KMVKAFRERRDFLVKSFGELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV-PGDAFGDD 437 (471)
Q Consensus 359 ~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~-pg~~f~~~ 437 (471)
++.++.++.++.+.+. |+++..+.++.++|+.++.. +..++.+.|.++ ||.+. +|.
T Consensus 268 ~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~------------~~~~l~~~L~~~-GI~v~~~g~----- 324 (446)
T 2x3l_A 268 LFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGF------------TGHDIQNWFMNA-HIYLELADD----- 324 (446)
T ss_dssp HHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTS------------CHHHHHHHHHHT-TEEESEECS-----
T ss_pred HHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCc------------CHHHHHHHHHHC-CCEEEecCC-----
Confidence 2444455555555554 67776666566789888632 678899988877 99987 543
Q ss_pred CcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 438 TCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 438 ~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
+++|++++. +++++ +++++|+++++++.
T Consensus 325 ~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~~ 354 (446)
T 2x3l_A 325 YQALAILPLWHHDDTY-LFDSLLRKIEDMIL 354 (446)
T ss_dssp SCEEEECCCCCTTCCC-CHHHHHHHHHTCCC
T ss_pred CEEEEEeecCCCHHHH-HHHHHHHHHHHhhc
Confidence 689999986 77889 99999999987653
No 208
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.95 E-value=4.1e-27 Score=242.52 Aligned_cols=339 Identities=13% Similarity=0.048 Sum_probs=231.6
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREG----FTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAK 165 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 165 (471)
.|+.+||+..|... ++. ++.+.+|+.+++... ...|+. ....++++.+++++.+..+ ...++|++++|++
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sGs 137 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACGS 137 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSHH
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 58889999988753 443 788999998865321 123432 3457899999998776554 2567999999999
Q ss_pred HHHHHHHHHhc--------C-----------------CC---CeEEEcCCCCCChHHHHH-HcCCEE-----------EE
Q 012095 166 QSILQAVLAVC--------S-----------------PG---DEVIIPAPFWVSYPEMAR-IADATP-----------VI 205 (471)
Q Consensus 166 ~al~~~~~~l~--------~-----------------~g---d~Vlv~~p~y~~~~~~~~-~~G~~~-----------~~ 205 (471)
+++..+++.+. . || +.|++.+++|+++...+. ..|... ..
T Consensus 138 eA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (472)
T 1ohv_A 138 CSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPI 217 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCE
T ss_pred hHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCcc
Confidence 99999998773 1 46 899999999998776543 333211 11
Q ss_pred ecCCCC-----CC--C-----cCCHHHHHhhhcc------CCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEE
Q 012095 206 LPTRIS-----EN--F-----LLDPKVLESKLTE------KSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 206 v~~~~~-----~~--~-----~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+++... .. + ..|+++|++++++ ++++|+++..+|+||. ..+++++++|.++|++| |+++|
T Consensus 218 ~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~-g~lli 296 (472)
T 1ohv_A 218 APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKH-GCAFL 296 (472)
T ss_dssp ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHT-TCEEE
T ss_pred cCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHh-CCEEE
Confidence 122100 00 1 1268899998876 7788877777888996 57899999999999999 99999
Q ss_pred EccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHH
Q 012095 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAA 346 (471)
Q Consensus 267 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~ 346 (471)
+||+|.++.+.|. ...+..... ...+.+.||||.+ ++| ||++ ++++. .+.......+++.+++++.++.++
T Consensus 297 ~DEv~~g~g~~g~-~~~~~~~gv--~~~~Di~t~sK~~-l~G---G~~~-~~~~~-~~~~~~~~~T~~~~~~~~aaa~aa 367 (472)
T 1ohv_A 297 VDEVQTGGGSTGK-FWAHEHWGL--DDPADVMTFSKKM-MTG---GFFH-KEEFR-PNAPYRIFNTWLGDPSKNLLLAEV 367 (472)
T ss_dssp EECTTTTTTTTSS-SSGGGGGCC--SSCCSEEEECGGG-SSE---EEEE-CGGGS-CSSSSSSCCSSSSCHHHHHHHHHH
T ss_pred EeCcccCCCCCCC-chhccccCC--CCCCCEEEEcccc-ccC---CccC-chhhc-ccccccccCccCccHHHHHHHHHH
Confidence 9999987654432 112211110 0012255899995 456 8877 66653 122222344567899999999988
Q ss_pred HhccCCChHHHHHHHHHHHHHHHHHHHHhcCC----CC-CeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHH
Q 012095 347 LGLGYAGGEVVSKMVKAFRERRDFLVKSFGEL----EG-VKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (471)
Q Consensus 347 L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~g-~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll 421 (471)
|+. ..+ +.+.++++++++++.+.|+++ ++ +....+.|.| ++++++.. .+...+++.|+
T Consensus 368 l~~---~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~-~~~~~~~~-----------~~~~~~~~~l~ 430 (472)
T 1ohv_A 368 INI---IKR--EDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTF-CSFDTPDE-----------SIRNKLISIAR 430 (472)
T ss_dssp HHH---HHH--TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTE-EEEECSSH-----------HHHHHHHHHHH
T ss_pred HHH---HHh--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceE-EEEEeCCh-----------hHHHHHHHHHH
Confidence 874 111 245667777777777777654 43 4444556555 55677532 13568899998
Q ss_pred HcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 422 DKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 422 ~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
++ ||.+.|+. .++||++++. ++++|++++++|++++++++
T Consensus 431 ~~-Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~~ 472 (472)
T 1ohv_A 431 NK-GVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADFK 472 (472)
T ss_dssp HT-TEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC-
T ss_pred HC-CeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 75 99999853 5799997764 89999999999999987653
No 209
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.94 E-value=4.4e-26 Score=228.32 Aligned_cols=299 Identities=12% Similarity=0.130 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH--HHHHHcC--CEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP--EMARIAD--ATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~--~~~~~~G--~~~~~v~~~~ 210 (471)
.++.+.+++.+.+.+|.+ +.+++|+|+++++..++.. +.+||+|++.++.|.++. ..++..| .+++.++.+.
T Consensus 34 ~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~-~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 109 (379)
T 3ke3_A 34 QEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQ-LTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAER 109 (379)
T ss_dssp HHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHH-HCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHh-CCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccc
Confidence 467777777777777743 6889999999999988755 579999999999887654 3455566 4788887653
Q ss_pred CC------C-CcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcc
Q 012095 211 SE------N-FLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHT 282 (471)
Q Consensus 211 ~~------~-~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~ 282 (471)
.+ . ..+|+++++++++ +++++|++++++||||.+++.+++++|.++|++| ++++|+|+++. . + ...
T Consensus 110 ~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-~~~li~D~~~~-g---~-~~~ 183 (379)
T 3ke3_A 110 TEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-GGLLVIDCIAS-G---C-VWL 183 (379)
T ss_dssp SSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT-TCEEEEECTTC-T---T-CCC
T ss_pred cccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc-CCEEEEEeccc-C---C-ccc
Confidence 11 1 1479999999995 5899999999999999999999999999999999 99999999975 2 1 111
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHHHHH----------------------hcccCCCChHHH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACNKIQ----------------------SQFTSGASSISQ 340 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~~~~----------------------~~~~~~~~~~~q 340 (471)
.+.. .+..+++.|++|.++ .+..+|++++++++++.+.... ..+..+++...+
T Consensus 184 ~~~~----~~~d~~~~s~~K~l~-~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~ 258 (379)
T 3ke3_A 184 DMKE----LGIDVLISAPQKGWS-STPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSL 258 (379)
T ss_dssp CHHH----HTCSEEEECTTTTTC-SCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHH
T ss_pred cccc----cCCCEEEecchhhcC-CCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHH
Confidence 1111 234588999999986 4446899999999988775311 011236777777
Q ss_pred HHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCC---cceEEeEecCCccCCcccCCCCCCCHHHH
Q 012095 341 KAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEPQ---GAFYLFIDFSTYYGSEAEGFGKIENSESL 416 (471)
Q Consensus 341 ~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~l 416 (471)
.++.++|+. ..+ .++++.++++++++++.+.|+++ |+++..+. .+....+..+. ....+
T Consensus 259 ~a~~aal~~---~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------------~~~~~ 321 (379)
T 3ke3_A 259 RQFRDAILE---AKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------------DDMHK 321 (379)
T ss_dssp HHHHHHHHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------------HHHHS
T ss_pred HHHHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------------cchHH
Confidence 777788764 233 26788889999999999999988 88776543 23323333321 12223
Q ss_pred HHHHHHcCCEEEECCCCCCC-----CCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 417 CRYLLDKAQVALVPGDAFGD-----DTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 417 ~~~Ll~~~gV~v~pg~~f~~-----~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
.+.|.+ +||.+.+|..+.. .+++|+++.. ++++|++++++|+++++++.
T Consensus 322 ~~~L~~-~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 322 GSAFAE-AGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp SHHHHH-TTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 455554 5999999986542 5799999985 88999999999999998764
No 210
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.90 E-value=2.9e-29 Score=256.22 Aligned_cols=340 Identities=14% Similarity=0.092 Sum_probs=231.8
Q ss_pred hcCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|... ++. ++.+.+++.+++.++.....+.....+|.+.|++++ + ..+.+++++++++++
T Consensus 97 ~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~~~~~~~~~~~~Lae~L~~~~----p---~~~~v~~~nSGseA~ 169 (465)
T 2yky_A 97 VDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQTENEALFAEAVCDRF----P---SIDLVRFTNSGTEAN 169 (465)
Confidence 468899999998853 433 788999999888764322224444556666666654 2 347899999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHH----HcCC--EEEEecCCCCCCCcCCHHHHHhhhc---cCCcEEEEcCC
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMAR----IADA--TPVILPTRISENFLLDPKVLESKLT---EKSRLLILCSP 237 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~----~~G~--~~~~v~~~~~~~~~ld~e~l~~~l~---~~~~~i~i~~p 237 (471)
..+++.+. ..+|.|++.+++|.++...+. ..|. .++.+|. .|++.|+++++ +++++|+++..
T Consensus 170 ~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~epv 242 (465)
T 2yky_A 170 LMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEPM 242 (465)
Confidence 99988752 345899999999988765433 1233 2233332 28899999887 57788777655
Q ss_pred CCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 238 SNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 238 ~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
+|+||. ..+++.+++|.++|++| ++++|+||+|. +.++. ...+.. .+....+.||||.+| .|+|+||+++
T Consensus 243 ~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~-~r~g~--~~a~~~----~gv~pDi~t~sK~lg-~G~piG~v~~ 313 (465)
T 2yky_A 243 LGAGGCVPAERAFLDLLRAEASRC-GALLIFDEVMT-SRLSG--GGAQEM----LGISADLTTLGKYIG-GGMSFGAFGG 313 (465)
Confidence 666995 45688999999999999 99999999999 64321 111111 122234568999999 5999999999
Q ss_pred CHHHHHHHHH-----HHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC---CCeeeCCCc
Q 012095 317 PKHFVAACNK-----IQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE---GVKMSEPQG 388 (471)
Q Consensus 317 ~~~~i~~l~~-----~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---g~~~~~p~~ 388 (471)
++++++.+.. .....+++.++++|.++.++|+.- ++ +.+.++++++.+++.+.|+++. ++....+..
T Consensus 314 ~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l---~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~ 388 (465)
T 2yky_A 314 RRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQI---YT--RQAASDLSASGDRFRANLNRIAVENQAPLQFTGL 388 (465)
Confidence 9999998876 234466788999999999888742 11 2355666666666666666541 332223445
Q ss_pred ceEEeEecCC-ccCC-cccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 389 AFYLFIDFST-YYGS-EAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 389 g~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
|.++|+.+++ .+.. .............+++.|+++ ||++.|+. |.. +++..++++|++++++|++++++++
T Consensus 389 G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~-GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~~l~~~~ 461 (465)
T 2yky_A 389 GSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRK-GIYLAPRG-MYA-----LSLEIADAGRDAFAEALADFIGEQR 461 (465)
Confidence 6567777753 1000 000000001245788888875 99999976 332 7777799999999999999988764
No 211
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=2.2e-26 Score=236.19 Aligned_cols=297 Identities=13% Similarity=0.123 Sum_probs=215.2
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChH-HHHHHHHHHhcC--CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAK-QSILQAVLAVCS--PGDEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~-~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
..++.+.+.+++.+.+|.+ ++ +++|+|++ .++..++.++.. +|+.|+++++.|+++...++..|++++.+++.+
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 5667788888888888853 34 99999999 455545555433 678899999999999999999999999998743
Q ss_pred -CCCCcCCHHHHHhhh-c----cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCcccc
Q 012095 211 -SENFLLDPKVLESKL-T----EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSF 284 (471)
Q Consensus 211 -~~~~~ld~e~l~~~l-~----~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~ 284 (471)
++++.+|+++|++++ + .++.+|++++|+||||.+.+ +++|.++|+++ ++++++|++|..+.++- .....
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~-g~~v~vD~A~~~~~~g~-~~~~~ 282 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENY-DIPHIINGAYAIQNNYY-LEKLK 282 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHHH-HHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHc-CCcEEEECcchHHHHHh-hHHHH
Confidence 356789999999999 5 35667778999999999999 89999999999 99999999998754310 00011
Q ss_pred ccCCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
..+.. +..+++.|++|.++ +++++||+++ ++++++.+...........+.+.+.++...+. .++++++.++
T Consensus 283 ~~~~~--~~D~~~~s~hK~~~-~p~g~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~-----~~~~~~~~~~ 354 (456)
T 2z67_A 283 KAFKY--RVDAVVSSSDKNLL-TPIGGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMG-----SKNYLELVKN 354 (456)
T ss_dssp HHHTS--CCSEEEEEHHHHHC-CCSSCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred HhhCC--CCCEEEEcCCCCcC-CCCCeEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 11111 22367889999864 6789999999 57888776432111111122444444444443 4667888999
Q ss_pred HHHHHHHHHHHhcCCC---CCeeeCCCcceEEeEec--CCccCCcccCCCCCCCHHHHHHHHHHcCCE---EEE------
Q 012095 364 FRERRDFLVKSFGELE---GVKMSEPQGAFYLFIDF--STYYGSEAEGFGKIENSESLCRYLLDKAQV---ALV------ 429 (471)
Q Consensus 364 ~~~~r~~l~~~L~~~~---g~~~~~p~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV---~v~------ 429 (471)
+.++++++.+.|.+++ |+.+.+|+ ++ +++++ +. ...++.+.|.++ || .+.
T Consensus 355 ~~~~~~~l~~~L~~~~~~~g~~v~~~~-~~-v~~~~~~~~-------------~~~~l~~~L~~~-gi~~~rv~~~~g~f 418 (456)
T 2z67_A 355 QKNSKKLLDELLNDLSKKTGGKFLDVE-SP-IASCISVNS-------------DPVEIAAKLYNL-RVTGPRGIKKTDHF 418 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCBCCCC-CS-SEEEEECSS-------------CHHHHHHHHHHT-TEESCEEECTTCHH
T ss_pred HHHHHHHHHHHHHhcccccCCEecCCC-Ce-EEEEEeccc-------------HHHHHHHHHHHc-CCCcceEEeecCcc
Confidence 9999999999999886 77777777 54 55566 31 246788888876 54 444
Q ss_pred CCCCCC--CCCcEEEEeec--CHHHHHHHHHHHHHHH
Q 012095 430 PGDAFG--DDTCIRISYAA--SLTTLQAAVERIKKGL 462 (471)
Q Consensus 430 pg~~f~--~~~~iRis~~~--~~e~i~~~~~~l~~~l 462 (471)
+|..|. ..+++|+|++. +++++++++++|++++
T Consensus 419 ~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 419 GNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp HHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 233332 24799999984 8999999999998754
No 212
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.94 E-value=7.9e-26 Score=234.64 Aligned_cols=333 Identities=11% Similarity=0.126 Sum_probs=232.3
Q ss_pred ChHHHHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh----c-------
Q 012095 109 TPVLIAEAGINAIRE-GFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV----C------- 176 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l----~------- 176 (471)
.++.+.+++.....+ ....|...++..++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++ +
T Consensus 112 ~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~ 190 (497)
T 2qma_A 112 LMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGHS 190 (497)
T ss_dssp BHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 367777776554433 33456555567889999999999999864 3379999999999999888873 3
Q ss_pred --CC------CC-eEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhccC----Cc--EEEEcCCC
Q 012095 177 --SP------GD-EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTEK----SR--LLILCSPS 238 (471)
Q Consensus 177 --~~------gd-~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~~----~~--~i~i~~p~ 238 (471)
.+ || .|+++++.|.++...++..|. +++.+|++ .++.+|+++|+++++++ ++ +|++++++
T Consensus 191 ~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~ 268 (497)
T 2qma_A 191 IQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGT 268 (497)
T ss_dssp HHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSC
T ss_pred hhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCC
Confidence 13 46 799999999999999999876 79999986 45789999999998653 44 77789999
Q ss_pred CCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCH
Q 012095 239 NPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPK 318 (471)
Q Consensus 239 NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~ 318 (471)
||||...+ +++|+++|++| ++++++|++|..+.+....... +.+.....+++.|++|.++.+ +++||+++++
T Consensus 269 ~~tG~~~~---l~~I~~l~~~~-~~~l~vD~a~~~~~~~~~~~~~---~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~ 340 (497)
T 2qma_A 269 TDHGAIDD---LDFIADMAVKH-DMWMHVDGAYGGALILSSHKSR---LKGVERAHSISVDFHKLFYQT-ISCGALLVND 340 (497)
T ss_dssp TTTCCBCC---HHHHHHHHHHH-TCEEEEEETTGGGGGGSTTGGG---GTTGGGCSEEEEETTTTTCCC-SSCEEEEESC
T ss_pred CCCCCCCC---HHHHHHHHHHc-CCEEEEehhhhHHHHhCcchHh---hcCcccCCEEEEcchhccCCC-cceEEEEEeC
Confidence 99999888 99999999999 9999999999986653221111 111112337788999998745 7999998754
Q ss_pred -HHHHHHHHHHhcccCC----CC-------------hHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 319 -HFVAACNKIQSQFTSG----AS-------------SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 319 -~~i~~l~~~~~~~~~~----~~-------------~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
..++.+.....+.... ++ .+.+.++...+ ..++++++.++..++++++.+.|++++|
T Consensus 341 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~ 415 (497)
T 2qma_A 341 KSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV-----GPKALGDMYDHLLAQTLEVADMIRTNDQ 415 (497)
T ss_dssp GGGGGGGCC--------------------CCSCCCTHHHHHHHHHHT-----CHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 3333332100000000 11 12222222222 3567888889999999999999999889
Q ss_pred Ceee-CCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee---cCHHHHHHHHH
Q 012095 381 VKMS-EPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA---ASLTTLQAAVE 456 (471)
Q Consensus 381 ~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~---~~~e~i~~~~~ 456 (471)
+++. +|.+++ +++++... +... .....++.+.|.++ |+.+.++..+...+++|+++. .++++++++++
T Consensus 416 ~~~~~~~~~~~-v~f~~~~~-~~~~-----~~l~~~l~~~l~~~-G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~ 487 (497)
T 2qma_A 416 FELLAEPSLST-VLFRATHE-TADL-----DELNKALRLEALTR-GIAVLGETIVDGKTALKFTILNPCLTTSDFESLLS 487 (497)
T ss_dssp EEECSCCSSSE-EEEEECCS-SSCH-----HHHHHHHHHHHHHH-TSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHH
T ss_pred eEEEcCCCceE-EEEEEcCC-ccCH-----HHHHHHHHHHHHhC-CCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHH
Confidence 8874 566665 55566431 0000 00124566777766 888776655555578999984 38999999999
Q ss_pred HHHHHHHhh
Q 012095 457 RIKKGLLTL 465 (471)
Q Consensus 457 ~l~~~l~~~ 465 (471)
+|+++++++
T Consensus 488 ~l~~~~~~~ 496 (497)
T 2qma_A 488 KINMLAVEL 496 (497)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 999988764
No 213
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=4.4e-25 Score=222.37 Aligned_cols=280 Identities=14% Similarity=0.180 Sum_probs=198.3
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH-----HHcCCEEEEecC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-----RIADATPVILPT 208 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-----~~~G~~~~~v~~ 208 (471)
..+|++.++++ .|. ++.++++++++++.. +..++++||+|++++|+|.+....+ +..|++++.++.
T Consensus 69 ~~~l~~~la~l----~g~----~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 139 (400)
T 3nmy_A 69 RFAYERCVAAL----EGG----TRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL 139 (400)
T ss_dssp HHHHHHHHHHH----HTC----SEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHH----hCC----CCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence 34555555554 442 367777777999997 5678899999999999998655543 346999999986
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLP 288 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 288 (471)
+ |++++++++++++++|++++|+||||.+++ +++|+++|++| ++++|+||+|....+.. + ..
T Consensus 140 ~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~-g~~livDe~~~~~~~~~----~-~~-- 201 (400)
T 3nmy_A 140 T-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKH-GLLTVVDNTFASPMLQR----P-LS-- 201 (400)
T ss_dssp T-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHT-TCEEEEECTTTHHHHCC----G-GG--
T ss_pred C-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHc-CCEEEEECCCcccccCC----h-hh--
Confidence 3 899999999999999999999999999998 99999999999 99999999997533221 1 11
Q ss_pred CCCCceEEEecCCcccCccchhhee--eE-cCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHH
Q 012095 289 GMWERTLTVNGFSKAFAMTGWRLGY--IA-GPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFR 365 (471)
Q Consensus 289 ~~~~~~i~~~S~SK~~g~~G~R~G~--v~-~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~ 365 (471)
.+..+++.|+||.++.+|.++|+ ++ .++++++.+.......+.+.+++...++...++. +....++..
T Consensus 202 --~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-------l~~r~~~~~ 272 (400)
T 3nmy_A 202 --LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-------LPLRMRAHC 272 (400)
T ss_dssp --GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-------HHHHHHHHH
T ss_pred --cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-------HHHHHHHHH
Confidence 24559999999999878788765 33 4788999988877777777888877666666553 445566677
Q ss_pred HHHHHHHHHhcCCCCCeee-CCC----------------cceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEE
Q 012095 366 ERRDFLVKSFGELEGVKMS-EPQ----------------GAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVAL 428 (471)
Q Consensus 366 ~~r~~l~~~L~~~~g~~~~-~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v 428 (471)
+++..+.+.|++.|.+..+ .|. .|..+++.++... .....|.+.| +-.++.+
T Consensus 273 ~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----------~~~~~~~~~l-~~~~~~~ 341 (400)
T 3nmy_A 273 ENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----------DAAKRFCEKT-ELFTLAE 341 (400)
T ss_dssp HHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----------HHHHHHHHHC-SSSEECS
T ss_pred HHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----------HHHHHHHHcC-CcceEec
Confidence 8888888999888776432 221 2455788885310 0234455543 2234445
Q ss_pred ECCCCCC-----------------------CCCcEEEEeec-CHHHHHHHHHHHHHHHH
Q 012095 429 VPGDAFG-----------------------DDTCIRISYAA-SLTTLQAAVERIKKGLL 463 (471)
Q Consensus 429 ~pg~~f~-----------------------~~~~iRis~~~-~~e~i~~~~~~l~~~l~ 463 (471)
..|..+. .++.+|+|++. +.+ +.++.|+++++
T Consensus 342 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~---dli~dl~~al~ 397 (400)
T 3nmy_A 342 SLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLG---DLRGDLERALV 397 (400)
T ss_dssp CCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHH---HHHHHHHHHHC
T ss_pred CCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHH---HHHHHHHHHHh
Confidence 5554321 13689999998 333 34455666654
No 214
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=5.8e-25 Score=225.70 Aligned_cols=337 Identities=14% Similarity=0.072 Sum_probs=217.0
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCCC-cEEEeCChHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREGF-TRYTP------NAGTLELRSAICHKLKEENGLSYTPD-QILVSNGAKQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~~~~~~g~~~~~~-~i~it~G~~~a 167 (471)
+.|.|-.+++. +++.|.+++...+.+.. .+|+. ..-..+|++...+++++.+|.+.+.. ..+++++++++
T Consensus 55 ~~i~lias~n~--~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~A 132 (490)
T 2a7v_A 55 RGLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPA 132 (490)
T ss_dssp HSEECCTTCCC--CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHH
T ss_pred cCceEECCCCC--CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHH
Confidence 35777765544 58899999988775532 23321 12234677666688888888532111 23455678899
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHH--------HHHHcCCEEE--EecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcC
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPE--------MARIADATPV--ILPTRISENFLLDPKVLESKLT-EKSRLLILCS 236 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~G~~~~--~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~ 236 (471)
+..++.++++|||+|+++++.|.++.. .+...|..+. .+++++ .++.+|++++++++. .++|+|++++
T Consensus 133 n~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~klIi~~~ 211 (490)
T 2a7v_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPRLIIAGT 211 (490)
T ss_dssp HHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCcEEEEcC
Confidence 999999999999999999998865431 2345565444 444443 346799999999986 4789998899
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC-ccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeE
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE-HIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIA 315 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~ 315 (471)
++||+ ..+ +++|.++|++| |+++++|++|. ++.+.+....++ . ...+++.|+||++ .|+|.|+++
T Consensus 212 s~~~~--~~d---l~~i~~ia~~~-g~~livD~Ah~~glv~~g~~~~~~-~-----~aDiv~~S~hK~l--~Gp~GG~i~ 277 (490)
T 2a7v_A 212 SAYAR--LID---YARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPF-K-----HADIVTTTTHKTL--RGARSGLIF 277 (490)
T ss_dssp SSCCS--CCC---HHHHHHHHHHT-TCEEEEECGGGHHHHHTTSSCCGG-G-----TCSEEEEESSGGG--CSCSCEEEE
T ss_pred CCCCC--ccc---HHHHHHHHHHc-CCEEEEccccccccccCCcCCCCC-C-----CCCEEEECCcccC--ccccchhee
Confidence 99875 456 89999999999 99999999975 344443322222 1 2238899999997 477889999
Q ss_pred cCHH---------------HHHHHHHHHhcccC-CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCC
Q 012095 316 GPKH---------------FVAACNKIQSQFTS-GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELE 379 (471)
Q Consensus 316 ~~~~---------------~i~~l~~~~~~~~~-~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 379 (471)
++++ +.+++.+...+... +++.....+...++... .....++..+++.++++++.+.|.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~--~~~~~~~~~~~~~~na~~L~~~L~~~- 354 (490)
T 2a7v_A 278 YRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA--CTPMFREYSLQVLKNARAMADALLER- 354 (490)
T ss_dssp EECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred eccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHHHc-
Confidence 8764 55666665443332 33444344444455431 11234777888899999999999987
Q ss_pred CCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCC-----CCCcEEEEee------cC
Q 012095 380 GVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFG-----DDTCIRISYA------AS 447 (471)
Q Consensus 380 g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~-----~~~~iRis~~------~~ 447 (471)
|+++.. +...+++|++++.. + .+..++.+.| ++.||.+..+..++ .+..|||+.. .+
T Consensus 355 G~~v~~~~t~t~lv~vdl~~~-g---------~~~~~~~~~L-~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~ 423 (490)
T 2a7v_A 355 GYSLVSGGTDNHLVLVDLRPK-G---------LDGARAERVL-ELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFR 423 (490)
T ss_dssp TCEEGGGSCSSSEEEEECTTT-T---------CCHHHHHHHH-HHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCC
T ss_pred CcEEecCCCCCeEEEEEeCCC-C---------CCHHHHHHHH-HhCCeEEecCccCCCCCCCCCCceEecccccccCCCC
Confidence 888864 34467789988642 1 1566666655 56699998655444 2468999763 27
Q ss_pred HHHHHHHHHHHHHHHH
Q 012095 448 LTTLQAAVERIKKGLL 463 (471)
Q Consensus 448 ~e~i~~~~~~l~~~l~ 463 (471)
+++++++++.|.+++.
T Consensus 424 ~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 424 EDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8999999999988875
No 215
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=3.4e-25 Score=228.79 Aligned_cols=332 Identities=14% Similarity=0.105 Sum_probs=242.9
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC--------CcEEEeCChHHHHHHHHHHhcC----
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP--------DQILVSNGAKQSILQAVLAVCS---- 177 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~--------~~i~it~G~~~al~~~~~~l~~---- 177 (471)
|..+.+.+..++..+...|...++..++++.+.+++.+.+|.+... ...++|+|+++++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~ 171 (481)
T 4e1o_A 92 PSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKIL 171 (481)
T ss_dssp HHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHH
Confidence 5566777778877777888888899999999999999999975322 3679999999999888776532
Q ss_pred ---------------CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC------CcEEEEcC
Q 012095 178 ---------------PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCS 236 (471)
Q Consensus 178 ---------------~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~------~~~i~i~~ 236 (471)
+++.|++++++|.++...++..|++++.+|++ .++.+|+++|+++++++ +.+|+++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~ 249 (481)
T 4e1o_A 172 EMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCATL 249 (481)
T ss_dssp HHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEec
Confidence 56799999999999999999999999999985 46789999999999753 66777899
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
++|+||.+-+ +++|+++|++| ++++++|++|....+........ +.+...-..+..+++|.++.| .-+|+++.
T Consensus 250 ~~t~~G~id~---l~~I~~la~~~-~~~lhvDaA~g~~~~~~~~~~~~--~~gi~~aDsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 250 GTTGVCAFDC---LSELGPICARE-GLWLHIDAAYAGTAFLCPEFRGF--LKGIEYADSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp SCTTTCCBCC---HHHHHHHHHHH-TCEEEEECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCcCcCC---HHHHHHHHHHc-CCeEEeehhhHHHHHhChhhHHH--hcCcccCCEEEEChHHhcCCC-CceEEEEE
Confidence 9999999988 99999999999 99999999998754322111111 111111235677899999755 45666665
Q ss_pred C-HHHHHHHHHHHhcc---------------c--C--CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhc
Q 012095 317 P-KHFVAACNKIQSQF---------------T--S--GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFG 376 (471)
Q Consensus 317 ~-~~~i~~l~~~~~~~---------------~--~--~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~ 376 (471)
. +..+.........+ . . ....+.+.++..++. .+.++++.++..++++++.+.|+
T Consensus 323 ~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~ 397 (481)
T 4e1o_A 323 KDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG-----VKNLQAHVRHGTEMAKYFESLVR 397 (481)
T ss_dssp SBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH-----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 4 44433211100000 0 0 013445555555553 56788889999999999999999
Q ss_pred CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHH
Q 012095 377 ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQA 453 (471)
Q Consensus 377 ~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~ 453 (471)
+++|+++..+....+++++++..- ....++.++|.+++.+.+.|+.. ....++|+++.. ++++|++
T Consensus 398 ~~~g~~~~~~~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~ 466 (481)
T 4e1o_A 398 NDPSFEIPAKRHLGLVVFRLKGPN----------SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR 466 (481)
T ss_dssp TCTTEECCSCCCSSEEEEEESSCH----------HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred cCCCeEEecCCceeEEEEEeCCch----------HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence 999999876555556777775320 13578899998885566666443 234689999775 7899999
Q ss_pred HHHHHHHHHHhhC
Q 012095 454 AVERIKKGLLTLR 466 (471)
Q Consensus 454 ~~~~l~~~l~~~~ 466 (471)
++++|+++++++.
T Consensus 467 ~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 467 DWNLIRDAATLIL 479 (481)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
No 216
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=9.8e-25 Score=227.36 Aligned_cols=334 Identities=14% Similarity=0.130 Sum_probs=231.9
Q ss_pred hHHHHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhc-------C-CCC
Q 012095 110 PVLIAE-AGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVC-------S-PGD 180 (471)
Q Consensus 110 p~~v~~-a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~-------~-~gd 180 (471)
|..+.. .+..........|...++..++.+.+.+++.+.+|.+ ++++++|+|+++++..++.++. + +||
T Consensus 121 ~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~ 198 (515)
T 2jis_A 121 PHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGL 198 (515)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 554443 3443333333467666777888999999999888864 6899999999999988887763 2 576
Q ss_pred ------eEEEcCCCCCChHHHHHHcCC---EEEEecCCCCCCCcCCHHHHHhhhcc------CCcEEEEcCCCCCcccCC
Q 012095 181 ------EVIIPAPFWVSYPEMARIADA---TPVILPTRISENFLLDPKVLESKLTE------KSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 181 ------~Vlv~~p~y~~~~~~~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~i~i~~p~NPtG~~~ 245 (471)
.|+++++.|+++...++..|. +++.+|++ .++.+|+++|++++++ ++++|++++|+||||.+.
T Consensus 199 ~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~ 276 (515)
T 2jis_A 199 RTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD 276 (515)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred cccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc
Confidence 899999999999999999988 89999986 3577999999999975 488999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHH--HHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKH--FVAA 323 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~--~i~~ 323 (471)
+ +++|+++|++| ++++++|++|+.+.+....... .+.+..+..+++.|++|.++ .+.++|+++++++ +++.
T Consensus 277 ~---l~~I~~la~~~-g~~l~vD~a~~~~~~~~~~~~~--~~~g~~~aD~v~~s~hK~l~-~p~g~G~l~~~~~~~~~~~ 349 (515)
T 2jis_A 277 P---LEAIADVCQRH-GLWLHVDAAWGGSVLLSQTHRH--LLDGIQRADSVAWNPHKLLA-AGLQCSALLLQDTSNLLKR 349 (515)
T ss_dssp C---HHHHHHHHHHH-TCEEEEEETTGGGGGGCTTTGG--GGTTGGGCSEEEECTTSTTC-CCSCCEEEEESCCSCHHHH
T ss_pred C---HHHHHHHHHHc-CCeEEEehhhhhHHHhChhhHh--hcCCCccCCEEEECcccccC-CCCCeeEEEEeChHHHHHH
Confidence 8 89999999999 9999999999987654321111 12221234588899999987 4467999998766 6654
Q ss_pred HH----HHH-h--c-----ccC---------CCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 012095 324 CN----KIQ-S--Q-----FTS---------GASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK 382 (471)
Q Consensus 324 l~----~~~-~--~-----~~~---------~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~ 382 (471)
.. ... . . +.. ....+.+.++..++. .+.++++.++..++++++.+.|++++|++
T Consensus 350 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg-----~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 424 (515)
T 2jis_A 350 CHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG-----DQGLERRIDQAFVLARYLVEEMKKREGFE 424 (515)
T ss_dssp HHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 21 110 0 0 000 012444555555553 45678888899999999999999998988
Q ss_pred eeC-CCcceEEeEecCCccCCcccCCCCCCC--------HHHHHHHHHHcCCEEE-ECCCCCCCCCcEEEEee---cCHH
Q 012095 383 MSE-PQGAFYLFIDFSTYYGSEAEGFGKIEN--------SESLCRYLLDKAQVAL-VPGDAFGDDTCIRISYA---ASLT 449 (471)
Q Consensus 383 ~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~Ll~~~gV~v-~pg~~f~~~~~iRis~~---~~~e 449 (471)
+.. |..+.+.|...|.... +.....+ ...+.+.|.++ |+.+ .+....+..+++|++++ .+++
T Consensus 425 ~~~~~~~~~v~f~~~p~~~~----~~~~~~~~~~~l~~~~~~l~~~l~~~-G~~~~~~~~~~~~~~~lRis~~~~~~t~e 499 (515)
T 2jis_A 425 LVMEPEFVNVCFWFVPPSLR----GKQESPDYHERLSKVAPVLKERMVKE-GSMMIGYQPHGTRGNFFRVVVANSALTCA 499 (515)
T ss_dssp ESSCCSSSEEEEEECCGGGT----TCTTSTTHHHHHHTHHHHHHHHHHHH-TSCEEEEEEETTEEEEEEEECCCTTCCHH
T ss_pred EeCCCCeeEEEEEEeCcccc----ccccchhHHHHHHHHHHHHHHHHHhc-CCEEEEEEEECCceEEEEEEeCCCCCCHH
Confidence 764 4455555543342110 0000001 11356667766 6543 22111122468999995 3899
Q ss_pred HHHHHHHHHHHHHHh
Q 012095 450 TLQAAVERIKKGLLT 464 (471)
Q Consensus 450 ~i~~~~~~l~~~l~~ 464 (471)
++++++++|++++++
T Consensus 500 did~~~~~l~~~~~~ 514 (515)
T 2jis_A 500 DMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999988764
No 217
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.94 E-value=4.1e-24 Score=214.71 Aligned_cols=315 Identities=13% Similarity=0.176 Sum_probs=220.4
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHh-
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAV- 175 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l- 175 (471)
+|.+..+.+. .++.+++++.+++... .|.+..+..++++.++++++ . +++++++++++++..++.++
T Consensus 3 ~~~~~~~~~~--~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~~----~----~~~i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 3 MINYPLASST--WDDLEYKAIQSVLDSK--MFTMGEYVKQYETQFAKTFG----S----KYAVMVSSGSTANLLMIAALF 70 (390)
T ss_dssp --CBCSCCCC--CCHHHHHHHHHHHHHT--CCSSCHHHHHHHHHHHHHHT----C----SEEEEESCHHHHHHHHHHHTT
T ss_pred ceeccCCCCC--CCHHHHHHHHHHHHcC--CCCCChHHHHHHHHHHHHHC----C----CcEEEECCHHHHHHHHHHHHH
Confidence 3444444433 3677888888888763 46677788999999999873 1 26777777778999999998
Q ss_pred ------cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHH
Q 012095 176 ------CSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNL 249 (471)
Q Consensus 176 ------~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~ 249 (471)
+++||+|+++.|+|.++...++..|++++.++++++ ++.+|+++|++++++++++|++++ ++|...+
T Consensus 71 ~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~--- 143 (390)
T 3b8x_A 71 FTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN--- 143 (390)
T ss_dssp SSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---
T ss_pred hhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---
Confidence 789999999999999999999999999999998754 478999999999988899998864 5666667
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccc-cCCCCccccccCCCCCCceEEEec--CCcccCccchhheeeEcCH-HHHHHHH
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSFASLPGMWERTLTVNG--FSKAFAMTGWRLGYIAGPK-HFVAACN 325 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~~~~i~~~S--~SK~~g~~G~R~G~v~~~~-~~i~~l~ 325 (471)
+++|.++|++| ++++|+|++|.... +++ ..... ...+...| .+|.++ +| +.|++++++ ++.+.+.
T Consensus 144 ~~~i~~l~~~~-~~~li~D~a~~~g~~~~~------~~~g~--~~~~~~~s~~~~k~~~-~g-~gG~~~~~~~~l~~~~~ 212 (390)
T 3b8x_A 144 FDEINKIIGGR-DIILLEDNCESMGATFNN------KCAGT--FGLMGTFSSFYSNHIA-TM-EGGCIVTDDEEIYHILL 212 (390)
T ss_dssp HHHHHHHHTTS-CCEEEEECTTCTTCEETT------EETTS--SSSEEEEECCTTSSSC-SS-SCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEEECcCcccCEECC------ccccc--ccceEEEEccCCCCCc-cC-CceEEEeCCHHHHHHHH
Confidence 99999999999 99999999998532 211 11111 11222222 245553 33 459999875 6777766
Q ss_pred HHHhcc-------------------------------cCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHH
Q 012095 326 KIQSQF-------------------------------TSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKS 374 (471)
Q Consensus 326 ~~~~~~-------------------------------~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~ 374 (471)
...... ++..+.+...++...| +++++..++.+++++++.+.
T Consensus 213 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-------~~l~~~~~~~~~~~~~l~~~ 285 (390)
T 3b8x_A 213 CIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-------KKLPRFISVRRKNAEYFLDK 285 (390)
T ss_dssp HHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 543211 1114555554444444 34667788888899999999
Q ss_pred hcCCCCCeeeCC--Ccce-EEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEEC---CCCCCC-C----------
Q 012095 375 FGELEGVKMSEP--QGAF-YLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVP---GDAFGD-D---------- 437 (471)
Q Consensus 375 L~~~~g~~~~~p--~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~p---g~~f~~-~---------- 437 (471)
|.+++|+++..+ .+++ .+++.++...+ .+..++.+.|.++ ||.+.+ |..+.. +
T Consensus 286 L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------~~~~~l~~~L~~~-gI~v~~~~~~~~~~~~~~~~~~~~~~~ 355 (390)
T 3b8x_A 286 FKDHPYLDVQQETGESSWFGFSFIIKKDSG---------VIRKQLVENLNSA-GIECRPIVTGNFLKNTDVLKYFDYTVH 355 (390)
T ss_dssp HTTCSSEEECCCCSBCCCCEEEEEECTTSC---------CCHHHHHHHHHHT-TBCCBCSTTSSGGGCHHHHTTCEEEES
T ss_pred hcCCCCcccCCCCCCcccEEEEEEecCcCc---------ccHHHHHHHHHHC-CCCeeeecCCchhhcchhhhcCCCCCc
Confidence 999888877643 2343 24556652100 1577888888664 999887 321111 0
Q ss_pred -----------CcEEEEeec--CHHHHHHHHHHH
Q 012095 438 -----------TCIRISYAA--SLTTLQAAVERI 458 (471)
Q Consensus 438 -----------~~iRis~~~--~~e~i~~~~~~l 458 (471)
+.+||++.. ++++++++++.|
T Consensus 356 ~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 356 NNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp SCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 259999987 899999988865
No 218
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=4.8e-25 Score=227.18 Aligned_cols=332 Identities=11% Similarity=0.048 Sum_probs=238.8
Q ss_pred hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-------CcEEEeCChHHHHHHHHHHhcC-----
Q 012095 110 PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTP-------DQILVSNGAKQSILQAVLAVCS----- 177 (471)
Q Consensus 110 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-------~~i~it~G~~~al~~~~~~l~~----- 177 (471)
|..+.+.+..++..+...|...++..+|++.+.+++.+.+|.+... ...++|+|+++++..++.+..+
T Consensus 87 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 87 PAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 4556667777776666778888889999999999999999965321 3689999999998877776521
Q ss_pred --------------CCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC------CcEEEEcCC
Q 012095 178 --------------PGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEK------SRLLILCSP 237 (471)
Q Consensus 178 --------------~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~------~~~i~i~~p 237 (471)
+++.|++++++|.++...++..|++++.||++ .++ +|+++|+++++++ +++|+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 34689999999999999999999999999986 346 9999999999754 567778999
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcC
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGP 317 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~ 317 (471)
+|+||.+.+ +++|+++|++| |+++++|++|+...+........ +.+......+..+++|.++ ....+|+++..
T Consensus 244 ~t~~G~~~~---l~~I~~la~~~-~~~lhvD~A~~~~~~~~~~~~~~--~~gi~~~Ds~~~~~hK~l~-~p~g~g~l~~~ 316 (475)
T 3k40_A 244 TTNSCAFDY---LDECGPVGNKH-NLWIHVDAAYAGSAFICPEYRHL--MKGIESADSFNFNPHKWML-VNFDCSAMWLK 316 (475)
T ss_dssp CTTTCCBCC---HHHHHHHHHHT-TCEEEEECTTGGGGGGSGGGGGG--GTTGGGCSEEEECHHHHSS-CCSSCEEEEES
T ss_pred CCCCcCcCC---HHHHHHHHHHh-CCeEEEeHHhHHHHHhCHhhHHH--hcCcccCCEEEECchhccC-CCCceEEEEEe
Confidence 999999988 99999999999 99999999998753321111111 1111122467788999886 33567877764
Q ss_pred H-HHH-HHHHHHHhcc--------------cC-C---CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 012095 318 K-HFV-AACNKIQSQF--------------TS-G---ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE 377 (471)
Q Consensus 318 ~-~~i-~~l~~~~~~~--------------~~-~---~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 377 (471)
+ +.+ +.+.....+. .. + ...+.+.++..++. .+.++++.+++.++++++.+.|++
T Consensus 317 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~ 391 (475)
T 3k40_A 317 DPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG-----VENLQAHIRRHCNFAKQFGDLCVA 391 (475)
T ss_dssp SGGGC---------------------------CCCGGGTHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 332 2221110000 00 0 12333444444442 466888899999999999999999
Q ss_pred CCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec---CHHHHHHH
Q 012095 378 LEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA---SLTTLQAA 454 (471)
Q Consensus 378 ~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~i~~~ 454 (471)
++|+++..+.....++++++..- ....++.++|.+++++.+.|+..++ ..++|+++.. ++++|+++
T Consensus 392 ~~g~~l~~~~~~~iv~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~ 460 (475)
T 3k40_A 392 DSRFELAAEINMGLVCFRLKGSN----------ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYS 460 (475)
T ss_dssp STTEEESSCCBTTEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHH
T ss_pred CCCEEEecCCceEEEEEEeCCch----------HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHH
Confidence 99999876555555677775320 1367899999988666677655443 5689999874 78999999
Q ss_pred HHHHHHHHHhhCC
Q 012095 455 VERIKKGLLTLRP 467 (471)
Q Consensus 455 ~~~l~~~l~~~~~ 467 (471)
+++|+++++++..
T Consensus 461 ~~~i~~~~~~~~~ 473 (475)
T 3k40_A 461 WKEVSAAADEMEQ 473 (475)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887654
No 219
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.92 E-value=6e-24 Score=215.73 Aligned_cols=258 Identities=15% Similarity=0.184 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChHHHHH----------HcCCEEE
Q 012095 136 ELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEMAR----------IADATPV 204 (471)
Q Consensus 136 ~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~~~----------~~G~~~~ 204 (471)
..++.+++++++.+|.+....+++++ |+++++..++.++++|||+|++++ |.|..+...+. ..|++++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~ 143 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYN 143 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEE
Confidence 45777777777777854333344455 668999999999999999999998 99999986653 4799999
Q ss_pred EecCCCCCCCcCCHHHHHhhhccCCcEEEEc-CCCCCcccCCCHHHHHHHHHHHHh--CCCeEEEEccCCCccccCCCCc
Q 012095 205 ILPTRISENFLLDPKVLESKLTEKSRLLILC-SPSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATH 281 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~-~p~NPtG~~~~~~~l~~i~~l~~~--~~~~~ii~De~y~~~~~~~~~~ 281 (471)
.++++. ++.+|++++++++++++++|+++ +||||+|.+.+.+++++|+++|++ + ++++|+||+|..+.++...
T Consensus 144 ~v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~-~~~livDea~~~~~~~~~~- 219 (431)
T 3ht4_A 144 AVPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP-DVVVFVDNCYGEFIEEQEP- 219 (431)
T ss_dssp ECCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-TCEEEEECTTCTTSSSCCG-
T ss_pred EeCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC-CCEEEEeCCChhhccCCCc-
Confidence 999864 36799999999999999999998 699999999999999999999999 9 9999999999987654321
Q ss_pred cccccCCCCCCceEEEecCCcccCc-cchhheeeEcCHHHHHHHHHHHhcccC----CCChHHHHHHHHHHhccCCChHH
Q 012095 282 TSFASLPGMWERTLTVNGFSKAFAM-TGWRLGYIAGPKHFVAACNKIQSQFTS----GASSISQKAGVAALGLGYAGGEV 356 (471)
Q Consensus 282 ~~~~~~~~~~~~~i~~~S~SK~~g~-~G~R~G~v~~~~~~i~~l~~~~~~~~~----~~~~~~q~aa~~~L~~~~~~~~~ 356 (471)
..+ +..++++||||.+|- .+...||+++++++++.+......... +++...+.++...+. .
T Consensus 220 ---~~~----g~Di~~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~-------~ 285 (431)
T 3ht4_A 220 ---CHV----GADLMAGSLIKNPGGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF-------L 285 (431)
T ss_dssp ---GGT----TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH-------H
T ss_pred ---ccc----CCeEEEcCccccCCCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh-------h
Confidence 111 234999999999652 113339999999999998875543222 121111233333332 3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeeCC----CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcC
Q 012095 357 VSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA 424 (471)
Q Consensus 357 ~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~ 424 (471)
+...+++..++++++.+.|+++ |+++.+. ..+..+.+.+++. ....+|++.|.+..
T Consensus 286 ~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~-----------~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 286 APHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDK-----------DRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCH-----------HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHHhcC
Confidence 4566677788888888888887 6665432 2233455666532 14567888877653
No 220
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.92 E-value=8.2e-24 Score=214.80 Aligned_cols=216 Identities=12% Similarity=0.094 Sum_probs=158.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEe-cC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVIL-PT 208 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v-~~ 208 (471)
..++++.+++++ |. .+.+ +++++++++..++.+++++||+|+++.++|.++...+ +..|++++.+ +.
T Consensus 60 ~~~l~~~la~~~----g~---~~~v-~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALE----GG---KAAL-ATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHH----TC---SEEE-EESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHh----CC---CceE-EecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 467777777775 32 2344 4555599999999999999999999999999887664 7789999998 65
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCC-CccccCCCCccccccC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIY-EHIIYAPATHTSFASL 287 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~ 287 (471)
+ |++++++++++++++|++++|+||||.+++ +++|.++|++| ++++|+|++| ... +.+. .+ .
T Consensus 132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~-g~~livD~~~~~~g-~~~~---~~-~- 194 (421)
T 2ctz_A 132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREK-GVALIVDNTFGMGG-YLLR---PL-A- 194 (421)
T ss_dssp C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHH-TCEEEEECGGGGGG-TSCC---GG-G-
T ss_pred C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHc-CCEEEEECCccccc-ccCC---cc-c-
Confidence 2 899999999999999999999999999999 99999999999 9999999999 532 2211 11 1
Q ss_pred CCCCCceEEEecCCcccCccchhheeeEcC---HHH----HHHHHH----------------------H----HhcccCC
Q 012095 288 PGMWERTLTVNGFSKAFAMTGWRLGYIAGP---KHF----VAACNK----------------------I----QSQFTSG 334 (471)
Q Consensus 288 ~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~---~~~----i~~l~~----------------------~----~~~~~~~ 334 (471)
.+..+++.|++|.++.+|.|+|++++. .++ ++.+.. . .......
T Consensus 195 ---~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~ 271 (421)
T 2ctz_A 195 ---WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQA 271 (421)
T ss_dssp ---GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCC
T ss_pred ---cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCC
Confidence 234589999999999899999998874 122 122210 0 0112234
Q ss_pred CChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeee
Q 012095 335 ASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMS 384 (471)
Q Consensus 335 ~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~ 384 (471)
.+++..+++...++. +....++..++.+++.+.|.++|++.+.
T Consensus 272 ~~~~~a~~~~~~l~~-------l~~r~~~~~~~a~~l~~~L~~~p~v~~v 314 (421)
T 2ctz_A 272 LGPFEAWVVLLGMET-------LSLRAERHVENTLHLAHWLLEQPQVAWV 314 (421)
T ss_dssp CCHHHHHHHHHHHTT-------HHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred CCHHHHHHHHcCcch-------HHHHHHHHHHhHHHHHHHHHhCCCeeEE
Confidence 555554444444432 4445556667888899999998887764
No 221
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=6.5e-24 Score=213.78 Aligned_cols=252 Identities=15% Similarity=0.178 Sum_probs=183.8
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChHHH----------H
Q 012095 131 NAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEM----------A 196 (471)
Q Consensus 131 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~----------~ 196 (471)
..|..+|++.+++++ | .+..++ ++|+++++..++.++++|||+|++++ |.|..+... +
T Consensus 58 ~~~~~~Le~~lA~l~----g----~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l 129 (409)
T 3jzl_A 58 DEGRDTLERVYATVF----K----TEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSL 129 (409)
T ss_dssp CHHHHHHHHHHHHHH----T----CSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCT
T ss_pred hhHHHHHHHHHHHHh----C----CCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHH
Confidence 345566777666665 4 234555 88999999999999999999999998 999999854 4
Q ss_pred HHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCCeEEEEccC
Q 012095 197 RIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPRLLVLSDEI 270 (471)
Q Consensus 197 ~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~----p~NPtG~~~~~~~l~~i~~l~~~--~~~~~ii~De~ 270 (471)
+..|++++.+++++ ++.+|++++++++++++++|++++ |+||||.+.+ +++|+++|++ | ++++++|++
T Consensus 130 ~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~---l~~I~~la~~~~~-~~~livD~a 203 (409)
T 3jzl_A 130 KDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEK---IKEMIVFVKNINP-EVIVFVDNC 203 (409)
T ss_dssp GGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHH---HHHHHHHHHHHCT-TCEEEEECT
T ss_pred HHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcccc---HHHHHHHHHhhCC-CCEEEEeCC
Confidence 66799999999864 467999999999999999999999 9999998765 9999999999 9 999999999
Q ss_pred CCccccCCCCccccccCCCCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHhcc----cCCCChHHHHHHHH
Q 012095 271 YEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQF----TSGASSISQKAGVA 345 (471)
Q Consensus 271 y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~~~----~~~~~~~~q~aa~~ 345 (471)
|..+.+.... .. .+..++++|+||.+|.+| .+.||+++++++++++....... ..++....+.++..
T Consensus 204 ~~~~~~~~~p----~~----~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~ 275 (409)
T 3jzl_A 204 YGEFVEYQEP----PE----VGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQ 275 (409)
T ss_dssp TCTTTSSCCS----GG----GTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHH
T ss_pred cccccccCCc----cc----cCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHH
Confidence 9876543211 11 234599999999998554 34699999999999988754321 12222211233333
Q ss_pred HHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc----ceEEeEecCCccCCcccCCCCCCCHHHHHHHHH
Q 012095 346 ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLL 421 (471)
Q Consensus 346 ~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll 421 (471)
.+ ......+++..+++.++.+.|+++ |+++.+..+ ...+.+.+++. ....+|++.|.
T Consensus 276 gl-------~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~~~~~~~~~i~~i~l~~~-----------~~~~~~~~~L~ 336 (409)
T 3jzl_A 276 GF-------FLAPHVTAQAIKGARFTAAMLAEF-GVEADPVWDAPRTDLIQSVSFHNK-----------EKMVAFAQAIQ 336 (409)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCCEEECSCH-----------HHHHHHHHHHH
T ss_pred HH-------hhHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHH
Confidence 33 334566777888999999999988 677643222 22455566532 14567888876
Q ss_pred Hc
Q 012095 422 DK 423 (471)
Q Consensus 422 ~~ 423 (471)
+.
T Consensus 337 ~~ 338 (409)
T 3jzl_A 337 AA 338 (409)
T ss_dssp HT
T ss_pred hc
Confidence 65
No 222
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=2.7e-23 Score=222.53 Aligned_cols=309 Identities=13% Similarity=0.067 Sum_probs=205.9
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH-HHHcCCEEEEecCCCC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM-ARIADATPVILPTRIS 211 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~-~~~~G~~~~~v~~~~~ 211 (471)
-..++++.+++++ |. ...+++++|+++++..++.++++|||.|+++.++|.++... ++..|++++.++...+
T Consensus 174 ~i~e~e~~lA~~~----ga---e~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 174 PAVAAEKHAARVY----NA---DKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRN 246 (730)
T ss_dssp HHHHHHHHHHHHT----TC---SEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEEC
T ss_pred HHHHHHHHHHHHH----CC---CcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3466777777664 52 34688999999999999999999999999999999998887 8899999999987532
Q ss_pred CCCc----CCHHHH-----HhhhccC------C----cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC
Q 012095 212 ENFL----LDPKVL-----ESKLTEK------S----RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (471)
Q Consensus 212 ~~~~----ld~e~l-----~~~l~~~------~----~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~ 272 (471)
+|+ +|+++| +++++++ + |++++++| ||+|.+.+ +++|+++|++| +++|++||+|.
T Consensus 247 -~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~-g~~livDeAh~ 320 (730)
T 1c4k_A 247 -PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHL-CDYIEFDSAWV 320 (730)
T ss_dssp -TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGG-BSEEEEECTTC
T ss_pred -ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHc-CCeEEEEcccc
Confidence 333 688888 8888765 5 88999999 58999998 89999999999 99999999997
Q ss_pred cc-ccCCCCc-cccccC---CCCCCceEEEecCCcccCccchhhe-eeEcCHHH-------H--HHHHHHH-hcccCCCC
Q 012095 273 HI-IYAPATH-TSFASL---PGMWERTLTVNGFSKAFAMTGWRLG-YIAGPKHF-------V--AACNKIQ-SQFTSGAS 336 (471)
Q Consensus 273 ~~-~~~~~~~-~~~~~~---~~~~~~~i~~~S~SK~~g~~G~R~G-~v~~~~~~-------i--~~l~~~~-~~~~~~~~ 336 (471)
.. .|++... .+.... ..+..+++++.|+||++ +|.+.| +++.+++. + ..+.... .....+++
T Consensus 321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~ 398 (730)
T 1c4k_A 321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPF 398 (730)
T ss_dssp CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCC
T ss_pred cccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCc
Confidence 43 3432111 111111 22234779999999986 566665 55333221 1 2232221 12233455
Q ss_pred hHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC-CCCCeeeCCCc---------------------------
Q 012095 337 SISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-LEGVKMSEPQG--------------------------- 388 (471)
Q Consensus 337 ~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-~~g~~~~~p~~--------------------------- 388 (471)
.....+..+++..- ..+.-.+..+++.++.+.+++.|.+ ++|+++..|..
T Consensus 399 ~~~iaal~aA~~~l--~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (730)
T 1c4k_A 399 YPMYAALDVNAAMQ--EGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGA 476 (730)
T ss_dssp HHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTC
T ss_pred HHHHHHHHHHHHHH--HhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccc
Confidence 55544444444421 1112344556677777777888877 67877754421
Q ss_pred ----------c-eE-----EeEecCCc--cCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CH
Q 012095 389 ----------A-FY-----LFIDFSTY--YGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 448 (471)
Q Consensus 389 ----------g-~~-----~~~~~~~~--~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~ 448 (471)
+ ++ +.+.+|.. ..-.... ...+..++.+.|.++ ||.+.+.. ...+|++++. ++
T Consensus 477 ~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~--~g~~~~~l~~~L~e~-GI~v~~~~----~~~ir~~~s~g~t~ 549 (730)
T 1c4k_A 477 KWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYED--FGVPATIVANYLRDH-GIIPEKSD----LNSILFLMTPAETP 549 (730)
T ss_dssp TTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECS--SCCCHHHHHHHHHHT-TCCCSEEC----SSEEEEECCTTCCH
T ss_pred hhccccccCCcccccCCeEEEEEeCCcccccccccc--cCCCHHHHHHHHHHC-CcEEEECC----CCeEEEEeCCCCCH
Confidence 1 11 34455420 0000000 012678899988876 98875532 4678888876 88
Q ss_pred HHHHHHHHHHHHHHHhh
Q 012095 449 TTLQAAVERIKKGLLTL 465 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~~ 465 (471)
++++.+++.|.++.+++
T Consensus 550 e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 550 AKMNNLITQLLQLQRLI 566 (730)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987765
No 223
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=2e-23 Score=210.94 Aligned_cols=270 Identities=12% Similarity=0.115 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHc-----CC--CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCC
Q 012095 111 VLIAEAGINAIRE-----GF--TRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGD 180 (471)
Q Consensus 111 ~~v~~a~~~~~~~-----~~--~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd 180 (471)
+.+.+++.++... +. ..| +..|..+|++.+++++ | .+..++ ++|+++++..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y-~~~g~~~Le~~lA~l~----g----~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGY-NDIGRDSLDRVYANIF----N----TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCT-TCHHHHHHHHHHHHHH----T----CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCC-CchhHHHHHHHHHHHh----C----CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 4566666654221 11 234 3345566666666664 4 234466 78889999999999999999
Q ss_pred eEEEcC-CCCCChHH-----------HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEEcC----CCCCcc
Q 012095 181 EVIIPA-PFWVSYPE-----------MARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTG 242 (471)
Q Consensus 181 ~Vlv~~-p~y~~~~~-----------~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i~~----p~NPtG 242 (471)
+|++++ |.|.++.. .++..|++++.++. +++.+|+++++++++ +++|+|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 99998873 34568999999997 245799999999998 7899999988 999998
Q ss_pred cCCCHHHHHHHHHHHHh--CCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-hhheeeEcCHH
Q 012095 243 SVYPKNLLDEIARIVAK--HPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKH 319 (471)
Q Consensus 243 ~~~~~~~l~~i~~l~~~--~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~ 319 (471)
.+. ++++|+++|++ + ++++++|++|..+.+... + .. .+..++++|+||.+|.+| .+.||++++++
T Consensus 195 ~v~---dl~~i~~ia~~~~~-g~~livD~a~~~~~~~~~---p-~~----~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~ 262 (427)
T 3hvy_A 195 RIA---EIAEIIKSIREVNE-NVIVFVDNCYGEFVEEKE---P-TD----VGADIIAGSLIKNIGGGIATTGGYIAGKEE 262 (427)
T ss_dssp CHH---HHHHHHHHHHHHCS-SSEEEEECTTCTTTSSSC---G-GG----GTCSEEEEETTSGGGTTTCCSCEEEEECHH
T ss_pred cHH---HHHHHHHHHHHhCC-CCEEEEECCccccccCCC---C-cc----cCCeEEEECCcccccccccceEEEEEECHH
Confidence 765 49999999999 8 999999999987654321 1 11 234599999999997444 45699999999
Q ss_pred HHHHHHHHHhcccCC---CChHH-HHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc----ceE
Q 012095 320 FVAACNKIQSQFTSG---ASSIS-QKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFY 391 (471)
Q Consensus 320 ~i~~l~~~~~~~~~~---~~~~~-q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~----g~~ 391 (471)
+++++.........+ .+++. ..++...+ ......+++..+++.++.+.|+++ |+++.+..+ ...
T Consensus 263 li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-------~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~li 334 (427)
T 3hvy_A 263 YVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-------FMAPHVTIEAVKGAVFCARIMELA-GFDVLPKYNDKRTDII 334 (427)
T ss_dssp HHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSE
T ss_pred HHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-------hHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCceEE
Confidence 999998754322211 11122 22333222 234566777888889999999888 666643322 224
Q ss_pred EeEecCCccCCcccCCCCCCCHHHHHHHHHHc
Q 012095 392 LFIDFSTYYGSEAEGFGKIENSESLCRYLLDK 423 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~ 423 (471)
+.+.+.+. ....+|++.|...
T Consensus 335 ~~~~l~~~-----------~~~~~f~~~l~~~ 355 (427)
T 3hvy_A 335 QAIKFNDE-----------KKLIDFIKGIQTA 355 (427)
T ss_dssp EEEECSSH-----------HHHHHHHHHHHHT
T ss_pred EEEeCCCH-----------HHHHHHHHHhccc
Confidence 56666432 1456778877553
No 224
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=9e-24 Score=213.51 Aligned_cols=254 Identities=11% Similarity=0.077 Sum_probs=182.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE---eCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChHHH----------
Q 012095 130 PNAGTLELRSAICHKLKEENGLSYTPDQILV---SNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYPEM---------- 195 (471)
Q Consensus 130 ~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i---t~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~~~---------- 195 (471)
+..|..+|++.+++++ |. +..++ ++|+++++..++.++++|||+|++++ |.|.++...
T Consensus 71 ~~~~~~~Le~~lA~l~----g~----e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~ 142 (427)
T 3i16_A 71 GDIGRDSLDAVYARVF----NT----ESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMG 142 (427)
T ss_dssp TCHHHHHHHHHHHHHH----TC----SEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSC
T ss_pred CHHHHHHHHHHHHHHh----CC----cceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHH
Confidence 3445566666666664 42 33355 78889999999999999999999999 999988743
Q ss_pred -HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEEcC----CCCCcccCCCHHHHHHHHHHHHh--CCCeEEE
Q 012095 196 -ARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLILCS----PSNPTGSVYPKNLLDEIARIVAK--HPRLLVL 266 (471)
Q Consensus 196 -~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i~~----p~NPtG~~~~~~~l~~i~~l~~~--~~~~~ii 266 (471)
++..|++++.++++.+ +.+|+++++++++ +++|+|++++ |+||||.+. ++++|+++|++ + +++++
T Consensus 143 ~l~~~G~~~~~v~~~~~--g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~---dl~~i~~la~~~~~-g~~li 216 (427)
T 3i16_A 143 SLKEFGINYKQVDLKED--GKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIE---DIKSIVDCVKNIRK-DIICF 216 (427)
T ss_dssp CTGGGTCEEEECCCCTT--SSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHH---HHHHHHHHHHHHCT-TSEEE
T ss_pred HHHHcCCEEEEecCccC--CCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHH---HHHHHHHHHHHhCC-CCEEE
Confidence 4567999999998643 4689999999998 7899999988 999998765 49999999999 9 99999
Q ss_pred EccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHHhcccCC--CCh-HHHHH
Q 012095 267 SDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQSQFTSG--ASS-ISQKA 342 (471)
Q Consensus 267 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~~~~~~~--~~~-~~q~a 342 (471)
+|++|..+.+... + .. .+..++++|+||.+|.+| .+.||+++++++++++.........+ ..+ +. +
T Consensus 217 vD~a~~~~~~~~~---p-~~----~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~--~ 286 (427)
T 3i16_A 217 VDNCYGEFMDTKE---P-TD----VGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFG--V 286 (427)
T ss_dssp EECTTTTTSSSSC---G-GG----GTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTT--C
T ss_pred EECCCccccccCC---c-cc----cCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCccCCccHH--H
Confidence 9999987654321 1 11 234599999999997544 56799999999999988754322221 111 22 1
Q ss_pred HHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCCCc----ceEEeEecCCccCCcccCCCCCCCHHHHHH
Q 012095 343 GVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVKMSEPQG----AFYLFIDFSTYYGSEAEGFGKIENSESLCR 418 (471)
Q Consensus 343 a~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (471)
+..++.. ...+...+++..+++.++.+.|+++ |+++.+..+ ...+.+.+.+. ....+|++
T Consensus 287 a~~~l~g----l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~~~~~~~~~i~~i~l~~~-----------~~~~~f~~ 350 (427)
T 3i16_A 287 VRSMYQG----LFLAPHISMEALKGAILCSRIMELA-GFEVMPKYDEKRSDIIQSIKFNDK-----------DKLIEFCK 350 (427)
T ss_dssp HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESCTTSCCSSSCEEEECSSH-----------HHHHHHHH
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCCCCCccEEEEEEECCH-----------HHHHHHHH
Confidence 2222321 2335667788888999999999988 666653322 22455666432 14567888
Q ss_pred HHHHc
Q 012095 419 YLLDK 423 (471)
Q Consensus 419 ~Ll~~ 423 (471)
.|...
T Consensus 351 ~l~~~ 355 (427)
T 3i16_A 351 GIQTG 355 (427)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 87654
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=9.4e-22 Score=212.30 Aligned_cols=306 Identities=13% Similarity=0.085 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENF 214 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~ 214 (471)
.++++.++++ +|. .+.+++++|+++++..++.++++|||.|+++.|+|.++...+...|++++.++...+ +|
T Consensus 208 ~~~ee~la~l----~G~---d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~~ 279 (755)
T 2vyc_A 208 GESEKYAARV----FGA---DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RY 279 (755)
T ss_dssp HHHHHHHHHH----HTC---SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-TT
T ss_pred HHHHHHHHHH----hCC---CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-cc
Confidence 4455555544 452 356889999999999999999999999999999999999989999999999987643 33
Q ss_pred c----C-----CHHHHHhhhcc--CCc--------EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCcc-
Q 012095 215 L----L-----DPKVLESKLTE--KSR--------LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHI- 274 (471)
Q Consensus 215 ~----l-----d~e~l~~~l~~--~~~--------~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~- 274 (471)
+ + |++.|++++++ +++ ++++++| ||||.+.+ +++|+++|++| +++|++||+|...
T Consensus 280 g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~-~~~livDeA~~~~~ 354 (755)
T 2vyc_A 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKT-SDRLHFDEAWYGYA 354 (755)
T ss_dssp SCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTT-CSEEEEECTTCTTG
T ss_pred ccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHc-CCEEEEECcCchhc
Confidence 3 4 99999999864 344 8889998 79999998 89999999999 9999999999753
Q ss_pred ccCCC--Ccccccc--CCCCCCceEEEecCCcccCccchh-heeeEcCHH--HH--HHHHHH-HhcccCCCChHHHHHHH
Q 012095 275 IYAPA--THTSFAS--LPGMWERTLTVNGFSKAFAMTGWR-LGYIAGPKH--FV--AACNKI-QSQFTSGASSISQKAGV 344 (471)
Q Consensus 275 ~~~~~--~~~~~~~--~~~~~~~~i~~~S~SK~~g~~G~R-~G~v~~~~~--~i--~~l~~~-~~~~~~~~~~~~q~aa~ 344 (471)
.+++. +...+.. .+....+++++.|+||++ +|.+ .|+++++++ .+ ..+... ......+++.+...+..
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 23321 1112211 121246788999999986 5666 466666543 11 233332 22223456666555555
Q ss_pred HHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC---------CeeeCCC----------------------------
Q 012095 345 AALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG---------VKMSEPQ---------------------------- 387 (471)
Q Consensus 345 ~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g---------~~~~~p~---------------------------- 387 (471)
++++.-. ....++..+++.++.+.+++.|.+++| +++..|.
T Consensus 433 aA~~~l~--~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (755)
T 2vyc_A 433 VAVSMMD--GNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCW 510 (755)
T ss_dssp HHHHHHS--THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGT
T ss_pred HHHHHHH--hhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhh
Confidence 5554211 111233444444444555555544434 3333221
Q ss_pred ---------------cc------eEEeEecCCccCCcccC--CCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEe
Q 012095 388 ---------------GA------FYLFIDFSTYYGSEAEG--FGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISY 444 (471)
Q Consensus 388 ---------------~g------~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~ 444 (471)
.+ .-+.+.++.. +. .| .....++..+.+.|.+ +||.+... ..+.+|+.+
T Consensus 511 ~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~-~~--~G~~~~~g~~~~~l~~~L~~-~gI~~e~~----~~~~v~~~~ 582 (755)
T 2vyc_A 511 VMHPGESWHGFKDIPDNWSMLDPIKVSILAPGM-GE--DGELEETGVPAALVTAWLGR-HGIVPTRT----TDFQIMFLF 582 (755)
T ss_dssp BCCTTCTTTCCTTCCTTSEEECTTEEEEECSCB-CT--TSSBCSSCCCHHHHHHHHHT-TTCCCSEE----CSSEEEEEC
T ss_pred ccCcccccccccccCCCccccCCeEEEEEcCCC-CC--CCCccccCCcHHHHHHHHHH-CCCEEeec----CCCeEEEEE
Confidence 12 1234444421 10 00 0001256788887654 78876442 356899998
Q ss_pred ec--CHHHHHHHHHHHHHHHHhh
Q 012095 445 AA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 445 ~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+. ++++++.+++.|.++.+.+
T Consensus 583 ~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 583 SMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp CTTCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhh
Confidence 87 8889999999988886544
No 226
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.84 E-value=3.3e-20 Score=184.17 Aligned_cols=324 Identities=10% Similarity=0.053 Sum_probs=215.8
Q ss_pred CCCCChHHHHHHHHHHHHcCC----CCC--C-CCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE-eCChHHHHHHHHHHhc
Q 012095 105 PDFDTPVLIAEAGINAIREGF----TRY--T-PNAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQAVLAVC 176 (471)
Q Consensus 105 ~~~~~p~~v~~a~~~~~~~~~----~~Y--~-~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i-t~G~~~al~~~~~~l~ 176 (471)
...+.|+.|.+++.+.+.+.. ..+ . -..-..++.+...+.+++.+|.+ ++++|++ |.|+|++++.++..++
T Consensus 20 t~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~-~~~evif~t~~~T~a~n~a~~~l~ 98 (377)
T 3e77_A 20 FQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVP-DNYKVIFLQGGGCGQFSAVPLNLI 98 (377)
T ss_dssp CSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHG
T ss_pred ccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEcCchHHHHHHHHHhcc
Confidence 345568999999998764311 100 0 01112334444445555556642 3357888 5799999999999998
Q ss_pred CC--CCeEEEcCCCCCCh--HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHH
Q 012095 177 SP--GDEVIIPAPFWVSY--PEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDE 252 (471)
Q Consensus 177 ~~--gd~Vlv~~p~y~~~--~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~ 252 (471)
.+ ||+|++..-.+.+. ...++..|..++.++.+. ++..+++.++..+++++++|.+++-.|.||+.+|.
T Consensus 99 ~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi----- 171 (377)
T 3e77_A 99 GLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF----- 171 (377)
T ss_dssp GGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----
T ss_pred CCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCCCccEEEEeCccCchheEchh-----
Confidence 65 89987665544332 234556687777777643 34567788888888899999888888899999993
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH--------
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------- 324 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l-------- 324 (471)
+|+++ ++++++|.+... +.....+.. ++ +.+.|-.|.+|.+| +|+++.++++++.+
T Consensus 172 ---i~~~~-~~~~~vD~~q~~----g~~~id~~~----~~--~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~~ 235 (377)
T 3e77_A 172 ---IPDVK-GAVLVCDMSSNF----LSKPVDVSK----FG--VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSVL 235 (377)
T ss_dssp ---CCCCT-TCCEEEECTTTT----TSSCCCGGG----CS--EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGGG
T ss_pred ---hhccC-CCEEEEEccccc----CCCCCchhh----cC--EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCchh
Confidence 36778 999999999875 222222222 23 46788899998777 78888776653221
Q ss_pred --HHH-H-hcccCCCChHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHhcCCCCCeeeCC----CcceEEeEe
Q 012095 325 --NKI-Q-SQFTSGASSISQKAGVAALGLGYAGGE-VVSKMVKAFRERRDFLVKSFGELEGVKMSEP----QGAFYLFID 395 (471)
Q Consensus 325 --~~~-~-~~~~~~~~~~~q~aa~~~L~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p----~~g~~~~~~ 395 (471)
... . .....+++....+++.++|+.- .+. .++.+.++.++.++++++.|++++|+.+... .++..+.+.
T Consensus 236 ~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l--~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~ 313 (377)
T 3e77_A 236 EYKVQAGNSSLYNTPPCFSIYVMGLVLEWI--KNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 313 (377)
T ss_dssp CHHHHHTTTTCSSCCCHHHHHHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEE
T ss_pred hHHHHhhcCCCCCCchHHHHHHHHHHHHHH--HHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEE
Confidence 111 1 1123356676777777777641 123 4788899999999999999999988875321 234446667
Q ss_pred cCCccCCcccCCCCCCC-HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHhh
Q 012095 396 FSTYYGSEAEGFGKIEN-SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLTL 465 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~-~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~ 465 (471)
+++.-.. .+ ...+...|.+ +||.+.+|.. ..+.+|+|+.. ++++++.+++.|++++++.
T Consensus 314 ~~~~~~~--------~~~~~~~l~~l~~-~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 314 IGNAKGD--------DALEKRFLDKALE-LNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp ESSTTCC--------HHHHHHHHHHHHH-TTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCc--------hhHHHHHHHHHHH-CCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 7642000 00 1356666655 5999988753 34679999987 8999999999999998763
No 227
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.84 E-value=5.6e-20 Score=186.39 Aligned_cols=341 Identities=15% Similarity=0.133 Sum_probs=211.5
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.+|+.+||+..|. ..++. +|.+.+|+.+++.++.+...+..-..+|.+.|+++ .+ ..+.+.++++++++.
T Consensus 84 ~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~~~~~~~~~~~lae~l~~~----~p---~~~~v~f~~SGsEA~ 156 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGINLTGHNLLEGRLARLICER----FP---QIEQLRFTNSGTEAN 156 (454)
T ss_dssp TTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSCCCSEESSHHHHHHHHHHH----ST---TCSEEEEESSHHHHH
T ss_pred CCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCCccCCcHHHHHHHHHHHHh----CC---CCCEEEEeCchHHHH
Confidence 3688899998775 34444 78999999999987544333444444555555554 33 457999999999999
Q ss_pred HHHHHHhcC--CCCeEEEcCCCCCChHHHHH------HcCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEEEcCC
Q 012095 169 LQAVLAVCS--PGDEVIIPAPFWVSYPEMAR------IADATPVILPTRISENFLLDPKVLESKLTE---KSRLLILCSP 237 (471)
Q Consensus 169 ~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~------~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~i~~p 237 (471)
..+++.... ..+.|+..+.+|.+....+. ........+|. -|++.+++.+.+ ++.+|++...
T Consensus 157 e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvEPv 229 (454)
T 4ao9_A 157 LMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVEPM 229 (454)
T ss_dssp HHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEECSE
T ss_pred HHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEeccc
Confidence 998887532 23678888888887442211 11123333332 288889888853 3445555433
Q ss_pred CCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 238 SNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 238 ~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
+...| ...+++.+++|.++|++| |+++|.||++.. ..+.........+.+ | +-+++|.+| .|+.+|.+++
T Consensus 230 ~g~~G~~~p~~~fL~~lr~lc~~~-g~lLI~DEV~tG-R~G~~~a~e~~gv~P--D----i~t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 230 QGASGCIPGQPDFLQALRESATQV-GALLVFDEVMTS-RLAPHGLANKLGIRS--D----LTTLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp ESTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTGG-GGSTTCHHHHHTCCC--S----EEEEEGGGG-TTSSCEEEEE
T ss_pred cCCCCccCCchhhHHHHHHHHhhc-CCEEEEECCCcC-CCccccchhccCCCC--c----EEEeccccC-CCCcceeeee
Confidence 54466 566788999999999999 999999999974 222111111122222 2 446889998 8999999999
Q ss_pred CHHHHHHHHHH----HhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCCCe-eeCCCcceE
Q 012095 317 PKHFVAACNKI----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEGVK-MSEPQGAFY 391 (471)
Q Consensus 317 ~~~~i~~l~~~----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~-~~~p~~g~~ 391 (471)
.+++++.+... ....+++.++++..++.+.|+.-.. ++.++++.+.-+..++.|.+.+.+. ++. -+...|.|
T Consensus 301 ~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~~~~~~~~~~g~~l~~~L~~l~~~~-~~~~~vrg~G~m- 377 (454)
T 4ao9_A 301 RADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-PEAAGALAERGEALRARLNALCANE-GVAMQFTGIGSL- 377 (454)
T ss_dssp CHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHHHH-TBSCEEEEETTE-
T ss_pred HHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHHHHHHHhhC-CCCEEEeeeceE-
Confidence 99999877532 1234667899999999999875321 3333333333333333333333333 221 12233444
Q ss_pred EeEecCCccCCcccCCCCCCC---HHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeecCHHHHHHHHHHHHHHHHhhC
Q 012095 392 LFIDFSTYYGSEAEGFGKIEN---SESLCRYLLDKAQVALVPGDAFGDDTCIRISYAASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~~ 466 (471)
+.+.+.+........... .+ ...++..|+++ ||++.|.. ++.++...++++|++++++|++++.++.
T Consensus 378 ~gi~f~~~~~~~~~~~~~-~d~~~~~~~~~~ll~~-Gv~~~p~~------~~~~s~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 378 MNAHFVQGDVRSSEDLAA-VDGRLRQLLFFHLLNE-DIYSSPRG------FVVLSLPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp EEEESCCSCCCSGGGGTT-CCHHHHHHHHHHHHHT-TEECCTTC------EEECCTTCCHHHHHHHHHHHHHHHHHSG
T ss_pred EEEEEecCCCCCHHHHHh-hhHHHHHHHHHHHHHC-CEEEcCCC------CEEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence 333332110000000000 12 24566778876 99988743 4566666799999999999999998754
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.82 E-value=2.9e-19 Score=189.80 Aligned_cols=303 Identities=13% Similarity=0.156 Sum_probs=188.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISEN 213 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~ 213 (471)
..++++.+++++ | ....+++++|++.++..++.++++|||.|+++.++|.++...+...|++++.++...+ .
T Consensus 197 i~eaE~~lA~~f----G---a~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~-~ 268 (715)
T 3n75_A 197 HKEAEQYIARVF----N---ADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN-A 268 (715)
T ss_dssp HHHHHHHHHHHH----T---CSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHh----C---CCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc-c
Confidence 567777777775 4 3456778899899999999999999999999999999999999999999999987643 4
Q ss_pred CcC---------CHHHHHhhhcc--CCc---EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccc-cCC
Q 012095 214 FLL---------DPKVLESKLTE--KSR---LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAP 278 (471)
Q Consensus 214 ~~l---------d~e~l~~~l~~--~~~---~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~-~~~ 278 (471)
|++ |++.|++++++ ++| ++++++| ||+|.+++ +++|+++|+++ + |++||+|.... |++
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~-~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVK-S--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCS-E--EEEECTTCTTGGGSG
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcC-c--EEEccccccccccCC
Confidence 554 89999999964 334 8999999 99999999 77888888766 3 78999998653 432
Q ss_pred CCccccccCCC--CCCce-EEEecCCcccCccch-hheeeEcCHHH-HHHHHHHHhc-ccCCCChHHHHHHHHHHhccCC
Q 012095 279 ATHTSFASLPG--MWERT-LTVNGFSKAFAMTGW-RLGYIAGPKHF-VAACNKIQSQ-FTSGASSISQKAGVAALGLGYA 352 (471)
Q Consensus 279 ~~~~~~~~~~~--~~~~~-i~~~S~SK~~g~~G~-R~G~v~~~~~~-i~~l~~~~~~-~~~~~~~~~q~aa~~~L~~~~~ 352 (471)
.. +....+.. ..+.+ +++.|++|+++ |+ -.||++++.++ .+.+.+.... .+.+++.+..+++.++++.-
T Consensus 342 ~~-~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~-- 416 (715)
T 3n75_A 342 IY-EGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMM-- 416 (715)
T ss_dssp GG-TTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHH--
T ss_pred cc-ccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHH--
Confidence 11 11111211 12443 66999999975 43 24788876543 2233333222 34456666665555555421
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCC----C--CeeeCCC-----------------------cce-E-----EeEecC
Q 012095 353 GGEVVSKMVKAFRERRDFLVKSFGELE----G--VKMSEPQ-----------------------GAF-Y-----LFIDFS 397 (471)
Q Consensus 353 ~~~~~~~~~~~~~~~r~~l~~~L~~~~----g--~~~~~p~-----------------------~g~-~-----~~~~~~ 397 (471)
....-.++++++.++.+.+++.|++++ | +.+..+. .++ + +.+.++
T Consensus 417 ~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~ 496 (715)
T 3n75_A 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTP 496 (715)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECS
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcC
Confidence 011223344555555555555555442 2 2222221 111 1 233333
Q ss_pred CccCCcccCC--CCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEE--EEeecCHHHHHHHHHHHHHHHHh
Q 012095 398 TYYGSEAEGF--GKIENSESLCRYLLDKAQVALVPGDAFGDDTCIR--ISYAASLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 398 ~~~~~~~~~~--~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iR--is~~~~~e~i~~~~~~l~~~l~~ 464 (471)
.. + ..|. ....++..+.+.|. ++||.+--... .+|= +|++.++++++.+++.|.++-+.
T Consensus 497 ~~-~--~~G~~~~~Gi~g~~~~~~L~-~~~I~~E~~d~----~~vl~l~s~g~~~~~~~~L~~aL~~~~~~ 559 (715)
T 3n75_A 497 GM-E--KDGTMSDFGIPASIVAKYLD-EHGIVVEKTGP----YNLLFLFSIGIDKTKALSLLRALTDFKRA 559 (715)
T ss_dssp CB-C--TTSCBCSSCCCHHHHHHHHH-HTTCCCSEEET----TEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CC-C--CCCccccCCCcHHHHHHHHH-HCCCEEEecCC----CcEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 21 0 0010 00125667777775 45887654332 2333 34445888888888888776543
No 229
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.81 E-value=1.2e-18 Score=172.31 Aligned_cols=324 Identities=14% Similarity=0.140 Sum_probs=213.9
Q ss_pred CeEEcCCCCCCCCChHHHHHHHHHHHHcC----CCCCC-CCCC--CHHHHHHHHHHHHHHhCCCCCCCcEEE-eCChHHH
Q 012095 96 SVIRLAAGEPDFDTPVLIAEAGINAIREG----FTRYT-PNAG--TLELRSAICHKLKEENGLSYTPDQILV-SNGAKQS 167 (471)
Q Consensus 96 ~~i~l~~g~~~~~~p~~v~~a~~~~~~~~----~~~Y~-~~~G--~~~lr~~ia~~~~~~~g~~~~~~~i~i-t~G~~~a 167 (471)
+++.|+.|-. +.|+.|++++.+.+.+. ...|. ...+ ..++.+...+.+++.+|.+ ++++|++ |.|+|++
T Consensus 5 ~~~~f~pgpt--~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~-~~~~v~f~t~~~T~a 81 (361)
T 3m5u_A 5 RKINFSAGPS--TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELN-DDYEVLFLQGGASLQ 81 (361)
T ss_dssp CCEECCSSSC--CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHH
T ss_pred ceEeecCCCC--CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCcHHHH
Confidence 4566665543 35788999988865421 11010 0011 1234444444555556642 3458887 9999999
Q ss_pred HHHHHHHhcCCCCeEE-EcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCC
Q 012095 168 ILQAVLAVCSPGDEVI-IPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVY 245 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vl-v~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~ 245 (471)
++.++..++ +||+++ +....|. .+...++..|+++..++.+.++.+.++++. + +++++++|.+++..|.||..+
T Consensus 82 ~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~ 157 (361)
T 3m5u_A 82 FAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQY 157 (361)
T ss_dssp HHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTTEEC
T ss_pred HHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeC
Confidence 999999998 888653 3232332 123456677999999998764433346666 4 888999999988888899987
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHHH
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACN 325 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l~ 325 (471)
+. ++ ++ ++++++|.+... +.....+. +-.+++.|..|.+|.+| +|+++.++++++.+.
T Consensus 158 ~~--------i~-~~-~~~~~vD~~q~~----g~~~id~~------~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~ 215 (361)
T 3m5u_A 158 QN--------YP-KT-KTPLIVDASSDF----FSRKVDFS------NIALFYGGVQKNAGISG--LSCIFIRKDMLERSK 215 (361)
T ss_dssp SS--------CC-CC-SSCEEEECGGGT----TSSCCCCT------TEEEEEEETTTTSSCTT--CEEEEEEHHHHHHHH
T ss_pred Cc--------cc-cc-CCEEEEEccccc----CCCCCCcc------cCCEEEEechhccCCCc--cEEEEEcHHHHhhhc
Confidence 72 23 36 899999998875 22222221 12377889999998666 899999998887664
Q ss_pred H-----------H--HhcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCC-eeeC-C--
Q 012095 326 K-----------I--QSQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMSE-P-- 386 (471)
Q Consensus 326 ~-----------~--~~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~-~~~~-p-- 386 (471)
. . ......+++....+++.++|+. ..+ .++.+.++.++.++++++.|++++|+ .... +
T Consensus 216 ~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~---l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~ 292 (361)
T 3m5u_A 216 NKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDW---LLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKD 292 (361)
T ss_dssp TCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHH---HHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGG
T ss_pred CCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHH---HHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHH
Confidence 2 1 1112234677777777777764 122 37888899999999999999999766 4432 2
Q ss_pred CcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 387 QGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 387 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
.....+.+.+++..+ -..++...|. +.||.+.+|.. ..+.+|+|+.. ++++++.+++.|+++.++
T Consensus 293 rs~~ivsf~~~~~~~----------~~~~~~~~L~-~~gI~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 293 RSLMNVSFNIAKNKD----------LEPLFVKEAE-EAGMIGLKGHR--ILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp BCSSEEEEEESSCTT----------HHHHHHHHHH-HTTEECCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEECCCchh----------hhHHHHHHHH-HCCCEEecCCC--ccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 223346667764100 1246776654 55999988753 23579999987 899999999999998875
No 230
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.79 E-value=1.1e-18 Score=174.04 Aligned_cols=311 Identities=9% Similarity=0.063 Sum_probs=204.5
Q ss_pred ChHHHHHHHHHHHHcC----C-----CCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCcEEE-eCChHHHHHHHHHHhc
Q 012095 109 TPVLIAEAGINAIREG----F-----TRYTP--NAGTLELRSAICHKLKEENGLSYTPDQILV-SNGAKQSILQAVLAVC 176 (471)
Q Consensus 109 ~p~~v~~a~~~~~~~~----~-----~~Y~~--~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i-t~G~~~al~~~~~~l~ 176 (471)
.|+.|++++.+.+.+. . .+.++ ..-..+.|+.+++++ |.+ ++++|++ |.|+|++++.++..++
T Consensus 38 ~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll----~~~-~~~evif~t~~~T~a~n~ai~~l~ 112 (386)
T 3qm2_A 38 LPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL----NIP-SNYKVLFCHGGGRGQFAGVPLNLL 112 (386)
T ss_dssp CCHHHHHHHTCC-----------------------CCHHHHHHHHHHH----TCC-TTEEEEEEESCTTHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEEEcCCchHHHHHHHHhcc
Confidence 5788888887655321 0 01111 234567777777776 421 2357888 6899999999999999
Q ss_pred CCCCeEEEcCCCCCC--hHHHHHHcCCEEEEecCC-CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccC-CCHHHHHH
Q 012095 177 SPGDEVIIPAPFWVS--YPEMARIADATPVILPTR-ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSV-YPKNLLDE 252 (471)
Q Consensus 177 ~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~-~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~-~~~~~l~~ 252 (471)
.+||+|++..-++.+ +...++..| ++..++.+ .+.++.+++++++.++++++++|.+++-.|.||+. .+ +++
T Consensus 113 ~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~p---i~~ 188 (386)
T 3qm2_A 113 GDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDE---TPD 188 (386)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCC---CCC
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCc---hhh
Confidence 999997654332222 223456678 89889876 12344468888888899999999888888889996 77 555
Q ss_pred HHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEcCHHHHHHH--------
Q 012095 253 IARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAGPKHFVAAC-------- 324 (471)
Q Consensus 253 i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~~~~~i~~l-------- 324 (471)
|. + ++++++|.+... +.....+..+ + +.+.|-.|.+|.+| +|+++.++++++.+
T Consensus 189 i~-----~-g~~~~vDa~qs~----g~~pidv~~~----~--~~~~s~hK~lGP~G--~g~l~v~~~~~~~~~~~~p~~~ 250 (386)
T 3qm2_A 189 FG-----P-EVVVTADFSSTI----LSAPLDVSRY----G--VIYAGAQKNIGPAG--LTLVIVREDLLGKAHESCPSIL 250 (386)
T ss_dssp CC-----T-TCCEEEECTTTT----TSSCCCGGGC----S--EEEEETTTTTCCTT--EEEEEEEGGGCSCCCTTSCGGG
T ss_pred hc-----C-CCEEEEEccccc----CCCCCCcccc----C--EEEEecccccCCCc--cEEEEECHHHHhhhcccCCcHH
Confidence 53 6 899999999875 2222223222 3 45688899998666 89988877653211
Q ss_pred --HHH-H-hcccCCCChHHHHHHHHHHhccCCChH--HHHHHHHHHHHHHHHHHHHhcCCCCC-eee-CC--CcceEEeE
Q 012095 325 --NKI-Q-SQFTSGASSISQKAGVAALGLGYAGGE--VVSKMVKAFRERRDFLVKSFGELEGV-KMS-EP--QGAFYLFI 394 (471)
Q Consensus 325 --~~~-~-~~~~~~~~~~~q~aa~~~L~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~g~-~~~-~p--~~g~~~~~ 394 (471)
... . .....+++....+++.++|+. ..+ .++.+.++.++.++++++.|+++ |+ ... .+ .+...+.+
T Consensus 251 ~~~~~~~~~~~~gTp~v~~i~~l~~Al~~---~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f 326 (386)
T 3qm2_A 251 DYTVLNDNDSMFNTPPTFAWYLSGLVFKW---LKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPF 326 (386)
T ss_dssp CHHHHHHC-------CCSHHHHHHHHHHH---HHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEE
T ss_pred HHHHHhhcCCCCCCCcHHHHHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEE
Confidence 111 1 111224566666677777764 233 47888899999999999999988 65 221 11 23344666
Q ss_pred ecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CHHHHHHHHHHHHHHHHh
Q 012095 395 DFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SLTTLQAAVERIKKGLLT 464 (471)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~i~~~~~~l~~~l~~ 464 (471)
.+++. + ...++...|. ++||.+.+|... .+.+|+|+.. ++++++++++.|+++.++
T Consensus 327 ~~~~~-~----------~~~~~~~~L~-~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 327 QLADN-T----------LDKVFLEESF-AAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp EESSG-G----------GHHHHHHHHH-HTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ECCCc-c----------ccHHHHHHHH-HCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 77641 0 1256777654 559999887533 3569999987 899999999999998875
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.77 E-value=2.6e-16 Score=160.76 Aligned_cols=351 Identities=12% Similarity=0.070 Sum_probs=212.3
Q ss_pred cCCCeEEcCCCCCC--CCC-hHHHHHHHHHHHHcCCCCCCCCCC-CHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 93 AGVSVIRLAAGEPD--FDT-PVLIAEAGINAIREGFTRYTPNAG-TLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 93 ~g~~~i~l~~g~~~--~~~-p~~v~~a~~~~~~~~~~~Y~~~~G-~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
.|+.+||+..|... ++. ++.+.+|+.+++.+.. .|....+ ..+....+++.+.+..+. ..+.+++++++++|.
T Consensus 65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~-~~~~~~~~~~~~~~~lAe~L~~~~p~--~~~~v~f~~sGsEA~ 141 (473)
T 4e3q_A 65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFP-GYHAFFGRMSDQTVMLSEKLVEVSPF--DSGRVFYTNSGSEAN 141 (473)
T ss_dssp TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCC-CCCCCTTEEEHHHHHHHHHHHHHSSC--SSCEEEEESSHHHHH
T ss_pred CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcc-cccccccccCHHHHHHHHHHHhhCCC--CccEEEEeCchHHHH
Confidence 68889999888743 343 7899999999887632 2322222 345556677777665542 346999999999999
Q ss_pred HHHHHHhc-------CCC-CeEEEcCCCCCChHHHHHHcCC------------EEEEecCCCC---CCCcC--------C
Q 012095 169 LQAVLAVC-------SPG-DEVIIPAPFWVSYPEMARIADA------------TPVILPTRIS---ENFLL--------D 217 (471)
Q Consensus 169 ~~~~~~l~-------~~g-d~Vlv~~p~y~~~~~~~~~~G~------------~~~~v~~~~~---~~~~l--------d 217 (471)
+.+++... .++ ..|+....+|++....+..... ..+.++.... ....- .
T Consensus 142 e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 221 (473)
T 4e3q_A 142 DTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARL 221 (473)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHHHHH
Confidence 99988642 244 5688888888875443322221 1222222110 00000 1
Q ss_pred HHHHHhhhc----cCCcEEEEcCCCCCccc-CCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCc-cccccCCCCC
Q 012095 218 PKVLESKLT----EKSRLLILCSPSNPTGS-VYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATH-TSFASLPGMW 291 (471)
Q Consensus 218 ~e~l~~~l~----~~~~~i~i~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~ 291 (471)
.+++++.+. ++..+|++...+.-.|. ..+++.+++|.++|++| |+++|.||+...|.-.|... .....+.+
T Consensus 222 ~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~-gilLI~DEV~tGfGRtG~~fa~e~~gv~P-- 298 (473)
T 4e3q_A 222 ARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY-DIPVISDEVICGFGRTGNTWGCVTYDFTP-- 298 (473)
T ss_dssp HHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCCEEEECTTTSSSTTSSSCHHHHTTCCC--
T ss_pred HHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc-ceEEeccCccccCCcccchhHHHhcCCCC--
Confidence 234444442 12344444433544564 56788999999999999 99999999999874333211 11112222
Q ss_pred CceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHHH-------hcccCCCChHHHHHHHHHHhccCCChHHHHHHHHH
Q 012095 292 ERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKIQ-------SQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKA 363 (471)
Q Consensus 292 ~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~~-------~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~ 363 (471)
| +-+++|.++ .| +.+|.+++++++.+.+.... ...+++.++++.+++.+.|+.- + -+.+.++
T Consensus 299 D----i~t~~K~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i---~--~~~l~~~ 368 (473)
T 4e3q_A 299 D----AIISSKNLT-AGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVV---M--NEGLAEN 368 (473)
T ss_dssp S----EEEECGGGG-TTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHH---H--HSSHHHH
T ss_pred C----hHHhccccc-CCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhh---c--cccHHHH
Confidence 2 345789998 66 89999999999999886532 2356778999999998888741 1 1122223
Q ss_pred HHHHHHHHHHHhc---CCCCCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcE
Q 012095 364 FRERRDFLVKSFG---ELEGVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCI 440 (471)
Q Consensus 364 ~~~~r~~l~~~L~---~~~g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~i 440 (471)
.++.-+++.+.|+ +.+.+.-+... |+++-+.+-........-.........+.+.++++ ||++.|.. +.+
T Consensus 369 ~~~~g~~l~~~L~~l~~~~~v~~vRG~-Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~-Gll~~~~g-----~~i 441 (473)
T 4e3q_A 369 VRRLAPRFEERLKHIAERPNIGEYRGI-GFMWALEAVKDKASKTPFDGNLSVSERIANTCTDL-GLICRPLG-----QSV 441 (473)
T ss_dssp HHHHHHHHHHHHHHHTTSTTEEEEEEE-TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT-TEECEEET-----TEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeeEEeec-ceEEEEEEecCccccccccccHHHHHHHHHHHHHC-CcEEEecC-----CEE
Confidence 3333334444433 34454333333 34444554321110000000001245678888876 99988742 578
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 441 RISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 441 Ris~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
|++... +++++++++++|.++++++.
T Consensus 442 ~l~PPL~it~~eid~~~~~l~~al~~v~ 469 (473)
T 4e3q_A 442 VLCPPFILTEAQMDEMFDKLEKALDKVF 469 (473)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 887654 99999999999999998754
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.77 E-value=1e-16 Score=163.12 Aligned_cols=351 Identities=14% Similarity=0.116 Sum_probs=211.4
Q ss_pred hcCCCeEEcCCCC--CCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHH
Q 012095 92 QAGVSVIRLAAGE--PDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSI 168 (471)
Q Consensus 92 ~~g~~~i~l~~g~--~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 168 (471)
..|+.+||+..|. ..++. ++.+.+|+.+++.+..+.. ......+....+++.+.+....+ ..+.+++++++++|.
T Consensus 61 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~lae~L~~~~p~~-~~~~v~f~~sGsEA~ 138 (456)
T 4atq_A 61 VDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTC-FMVTPYEGYVAVTEQLNRLTPGD-HAKRTVLFNSGAEAV 138 (456)
T ss_dssp TTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT-TTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHHH
T ss_pred CCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcc-cCccCcHHHHHHHHHHHHhCCCC-CCcEEEEeCChHHHH
Confidence 3688899998884 55554 7899999999887632110 11111234445555555543311 245789999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCCChHHHHHHc-C-------------CEEEEecCCCC----CCCcCCHHHHHhhh---
Q 012095 169 LQAVLAVC--SPGDEVIIPAPFWVSYPEMARIA-D-------------ATPVILPTRIS----ENFLLDPKVLESKL--- 225 (471)
Q Consensus 169 ~~~~~~l~--~~gd~Vlv~~p~y~~~~~~~~~~-G-------------~~~~~v~~~~~----~~~~ld~e~l~~~l--- 225 (471)
+.+++... ...+.|+..+.+|++....+... + ..+..+|.... ....-+.+.+++.+
T Consensus 139 e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (456)
T 4atq_A 139 ENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMI 218 (456)
T ss_dssp HHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHH
Confidence 99888642 23478888899998765443322 1 12344443210 00011233333322
Q ss_pred ----cc-CCcEEEEcCCCCCcc-cCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEec
Q 012095 226 ----TE-KSRLLILCSPSNPTG-SVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNG 299 (471)
Q Consensus 226 ----~~-~~~~i~i~~p~NPtG-~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S 299 (471)
.. +..+|++...+.-.| ...+++.+++|.++|++| |+++|.||+...+.-.|.. .......-..| +-+
T Consensus 219 e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~-gillI~DEV~tG~GRtG~~-~a~e~~gv~PD----ivt 292 (456)
T 4atq_A 219 EKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK-GIVFIADEVQSGFCRTGEW-FAVDHEGVVPD----IIT 292 (456)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSS-SGGGGTTCCCS----EEE
T ss_pred HHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc-CCceEecccccccCCcccc-ccccccCCCCc----hhh
Confidence 22 344555543354456 456788999999999999 9999999999986433321 11111111112 345
Q ss_pred CCcccCccchhheeeEcCHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHhcC--
Q 012095 300 FSKAFAMTGWRLGYIAGPKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVKAFRERRDFLVKSFGE-- 377 (471)
Q Consensus 300 ~SK~~g~~G~R~G~v~~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~-- 377 (471)
|+|.+| .|+.+|.+++++++.+.+.......+++.++++.+++.+.|+.- ++ +.+.++.++.-+++.+.|++
T Consensus 293 ~gK~lg-gg~P~~av~~~~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i---~~--~~l~~~~~~~g~~l~~~L~~l~ 366 (456)
T 4atq_A 293 MAKGIA-GGLPLSAITGRADLLDAVHPGGLGGTYGGNPVACAAALAAIDTM---EQ--HDLNGRARHIEELALGKLRELA 366 (456)
T ss_dssp ECGGGG-TTSSCEEEEEEHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHH---HH--TTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccc-CcCCceeeEecHHHHhcccccCCCCCCCCChHHHHhhHHHHHHH---hh--ccHHHHHHHHHHHHHHHHHHHH
Confidence 789998 89999999999999988766555678889999999999988741 11 11222223333333333322
Q ss_pred --CC-----CCeeeCCCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEeec--CH
Q 012095 378 --LE-----GVKMSEPQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYAA--SL 448 (471)
Q Consensus 378 --~~-----g~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~~--~~ 448 (471)
++ -+.-+... |+++-+.+.+..... . .......+.+.++++ ||++.++..+ .+.|||.... ++
T Consensus 367 ~~~~~~~~~~v~~VRG~-Gl~~giel~~~~~~~-~---~~~~~~~v~~~~~~~-Gvl~~~~g~~--~~~irl~PpL~it~ 438 (456)
T 4atq_A 367 AELSAGGGSVVGDIRGR-GAMLAIELVQPGSKE-P---NAELTKAVAAACLKE-GVIILTCGTY--GNVIRLLPPLVISD 438 (456)
T ss_dssp HHCC-----CEEEEEEE-TTEEEEEEBCTTSCC-B---CHHHHHHHHHHHHHT-TEECEEECTT--SCEEEECCCTTCCH
T ss_pred HhcccccCCceEEeeec-ceEEEEEEecCCCCC-c---CHHHHHHHHHHHHHC-CCEEEecCCC--CCEEEEECCCCCCH
Confidence 21 11111222 444555653221000 0 000245677888876 9998875432 3579998764 99
Q ss_pred HHHHHHHHHHHHHHHh
Q 012095 449 TTLQAAVERIKKGLLT 464 (471)
Q Consensus 449 e~i~~~~~~l~~~l~~ 464 (471)
+++++++++|+++++.
T Consensus 439 ~~id~~l~~l~~al~a 454 (456)
T 4atq_A 439 ELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999874
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.71 E-value=8.6e-17 Score=174.91 Aligned_cols=350 Identities=13% Similarity=0.067 Sum_probs=211.9
Q ss_pred CeEEcCCCC--CCCCC--hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHH
Q 012095 96 SVIRLAAGE--PDFDT--PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQA 171 (471)
Q Consensus 96 ~~i~l~~g~--~~~~~--p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 171 (471)
++||+..|. ..++. ++.+.+|+.+++.+-. ++.......+....+++.+.+..+.. ..+.++++++++++++.+
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~-h~~~~~~~~~~~~~Lae~L~~~~p~~-~l~~vff~~SGSeA~E~A 458 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFG-HVMFPENVYEPALKCAELLLDGVGKG-WASRVYFSDNGSTAIEIA 458 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHS-SCCCTTEECHHHHHHHHHHHHTTTTT-TCCEEEEESSHHHHHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhcc-cccccccCCHHHHHHHHHHHHhCCCC-CCCEEEECCChhHHHHHH
Confidence 688888774 34443 6889999999887622 12111223455567777776654421 136899999999999988
Q ss_pred HHHhc-----CC-----------C-CeEEEcCCCCCChH-HHHHHcCCE---------------E-------------EE
Q 012095 172 VLAVC-----SP-----------G-DEVIIPAPFWVSYP-EMARIADAT---------------P-------------VI 205 (471)
Q Consensus 172 ~~~l~-----~~-----------g-d~Vlv~~p~y~~~~-~~~~~~G~~---------------~-------------~~ 205 (471)
++... .. + ..|+..+.+|++-. ..+...|.. + ..
T Consensus 459 lK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 538 (831)
T 4a0g_A 459 LKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWN 538 (831)
T ss_dssp HHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEE
T ss_pred HHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceE
Confidence 88752 12 2 36888888887544 334433311 0 01
Q ss_pred ecCCCC------C--CCcCC------------------HHHHHhhhc--------cCCcEEEEcCC-CCCccc-CCCHHH
Q 012095 206 LPTRIS------E--NFLLD------------------PKVLESKLT--------EKSRLLILCSP-SNPTGS-VYPKNL 249 (471)
Q Consensus 206 v~~~~~------~--~~~ld------------------~e~l~~~l~--------~~~~~i~i~~p-~NPtG~-~~~~~~ 249 (471)
++.... + .|. + .+.|++.+. +++.+|++... ++..|. +++++.
T Consensus 539 ~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~ 617 (831)
T 4a0g_A 539 ISLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLF 617 (831)
T ss_dssp EECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHH
T ss_pred ecCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHH
Confidence 111100 0 010 1 256777664 23445555543 677775 558899
Q ss_pred HHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccc-hhheeeEcCHHHHHHHHHH-
Q 012095 250 LDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTG-WRLGYIAGPKHFVAACNKI- 327 (471)
Q Consensus 250 l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G-~R~G~v~~~~~~i~~l~~~- 327 (471)
+++|.++|++| |+++|+||++..|...|... ......-..| +.+|||.++ .| +++|++++++++++.+...
T Consensus 618 L~~l~~lc~~~-gilLI~DEV~tGfGRtG~~f-a~e~~gv~PD----iitlsK~L~-gG~~Plgav~~~~~i~~~~~~~~ 690 (831)
T 4a0g_A 618 QRVLVNECRNR-KIPVIFDEVFTGFWRLGVET-TTELLGCKPD----IACFAKLLT-GGMVPLAVTLATDAVFDSFSGDS 690 (831)
T ss_dssp HHHHHHHHHHT-TCCEEEECTTTTTTTTSBSS-THHHHSSCCS----EEEECGGGG-TTSSCCEEEEECHHHHHTTCSSC
T ss_pred HHHHHHHHHHc-CCeEEEEcCccccccCCCch-hhHhcCCCCc----EEEEecccc-cCccCcEEEEECHHHHHHHhccc
Confidence 99999999999 99999999999875444321 1111111112 336999997 67 8999999999999987542
Q ss_pred -----HhcccCCCChHHHHHHHHHHhccCCChHHHHHH---HHHHHH-HHHHHHHHhcCCCCCeeeCCCcceEEeEecCC
Q 012095 328 -----QSQFTSGASSISQKAGVAALGLGYAGGEVVSKM---VKAFRE-RRDFLVKSFGELEGVKMSEPQGAFYLFIDFST 398 (471)
Q Consensus 328 -----~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~---~~~~~~-~r~~l~~~L~~~~g~~~~~p~~g~~~~~~~~~ 398 (471)
....+++.++++++++.++|+.-.. +++.+++ .+++++ .++.+.+.+.+.+.+......|.| +.+.+..
T Consensus 691 ~~~~~~hg~T~~g~Pla~Aaala~L~~i~~-~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~-~~iel~~ 768 (831)
T 4a0g_A 691 KLKALLHGHSYSAHAMGCATAAKAIQWFKD-PETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTL-FALELKA 768 (831)
T ss_dssp GGGSCCCCCTTTTCHHHHHHHHHHHHHHHC-TTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEEETTE-EEEEEC-
T ss_pred ccccceeecCCcccHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEeecccE-EEEEEec
Confidence 1335677899999999998874110 1111111 111111 012234445555555555555555 5555532
Q ss_pred ccCCcccCCCCCCCHHHHHHHHHHcCCEEEECCCCCCCCCcEEEEee--cCHHHHHHHHHHHHHHHHhhC
Q 012095 399 YYGSEAEGFGKIENSESLCRYLLDKAQVALVPGDAFGDDTCIRISYA--ASLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~ 466 (471)
... ..+. .......+.+.|+++ ||++.|+. +.+|++.. .++++|++++++|.++++++.
T Consensus 769 ~~~--~~~~-~~~~a~~~~~~l~e~-Gv~v~p~g-----~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 769 DAS--NSGY-ASLYAKSLLIMLRED-GIFTRPLG-----NVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp -----------CHHHHHHHHHHHHT-TEECCCBT-----TEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred Ccc--cccc-chHHHHHHHHHHHHC-CcEEEecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 100 0000 001245788888875 99998852 68999854 499999999999999998764
No 234
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.70 E-value=1.4e-15 Score=150.74 Aligned_cols=311 Identities=18% Similarity=0.190 Sum_probs=198.8
Q ss_pred HHHHHHH-HHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCC---C-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 136 ELRSAIC-HKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP---G-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 136 ~lr~~ia-~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~---g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.|-+.++ +++. ..|++ .....++++|+|.++..++.+.+++ | |.|+++.-+|.+....+.++|+++++++...
T Consensus 116 ~ltn~l~ld~L~-~~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 116 KITNSLVLDIIK-LAGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVL 193 (501)
T ss_dssp HHHHHHHHHHHH-HTTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEE
T ss_pred HHHHHHHHHHHH-HcCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeee
Confidence 3444444 4444 44875 4457899999998888777777764 4 9999999999999999999999999998632
Q ss_pred C-CCCcCCHHHHHhhhccC---CcEEEEc-CCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccc-cCCCCcccc
Q 012095 211 S-ENFLLDPKVLESKLTEK---SRLLILC-SPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHII-YAPATHTSF 284 (471)
Q Consensus 211 ~-~~~~ld~e~l~~~l~~~---~~~i~i~-~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~-~~~~~~~~~ 284 (471)
+ +.+++|++.++++|.+. ..++++. .+.|-.|.+-+ +++|+++|++| |+++++||+|+... +........
T Consensus 194 d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~-gIpllVDeAhGah~~~~~~lp~sA 269 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANY-DIPHIVNNAYGVQSSKCMHLIQQG 269 (501)
T ss_dssp ETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTCTTCHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHc-CCeEEEeCcchhhhhhhhhhHHHH
Confidence 2 35789999999999652 3344444 44564556677 99999999999 99999999998532 111101112
Q ss_pred ccCCCCCCceEEEecCCcccCccchhheeeE-c-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHHH
Q 012095 285 ASLPGMWERTLTVNGFSKAFAMTGWRLGYIA-G-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMVK 362 (471)
Q Consensus 285 ~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~-~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~~ 362 (471)
..+. .-.+++.|..|.+-++ +. |+++ . ++++++++..... .. .+...+.......+.. ..+.++++.+
T Consensus 270 ~~~G---rAD~vVqS~HK~llvp-IG-G~ii~~~d~e~l~~~~~~yP-Gr-~S~Spsldl~~tLL~l---Gr~Gy~~ll~ 339 (501)
T 3hl2_A 270 ARVG---RIDAFVQSLDKNFMVP-VG-GAIIAGFNDSFIQEISKMYP-GR-ASASPSLDVLITLLSL---GSNGYKKLLK 339 (501)
T ss_dssp HHHS---CCCEEEEEHHHHHCCC-SS-CEEEEESCHHHHHHHHHTSC-SC-BCSHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred HhcC---CCcEEEecccccceee-cC-ceEEEeCCHHHHHHHHHhCC-CC-CCCcHHHHHHHHHHHH---HHHHHHHHHH
Confidence 2221 1347899999998433 22 4444 3 5677777644221 11 1223333233444443 2566788888
Q ss_pred HHHHHHHHHHHHhcCC---CCCeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcC--CEEE-ECCC---
Q 012095 363 AFRERRDFLVKSFGEL---EGVKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKA--QVAL-VPGD--- 432 (471)
Q Consensus 363 ~~~~~r~~l~~~L~~~---~g~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~--gV~v-~pg~--- 432 (471)
+..++.+++.+.|+++ -|-++.. |...+-+-+.+...-.. . ..+...|...|..+. |.-| .+|.
T Consensus 340 e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~--~----~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~ 413 (501)
T 3hl2_A 340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH--R----DKAVTQLGSMLFTRQVSGARVVPLGSMQT 413 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT--T----SCHHHHHHHHHHHTTCCSCEEECTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc--c----cccHHHHHHHHHhcCCCcceeecCCCceE
Confidence 8888888888888774 2444432 33444455555432100 0 013456677777662 3344 4454
Q ss_pred -------CCCCC------CcEEEEeec--CHHHHHHHHHHHHHHHHhhCCC
Q 012095 433 -------AFGDD------TCIRISYAA--SLTTLQAAVERIKKGLLTLRPG 468 (471)
Q Consensus 433 -------~f~~~------~~iRis~~~--~~e~i~~~~~~l~~~l~~~~~~ 468 (471)
.||.. .|+-++.+- +.+|++.++.+|.+++.+++.+
T Consensus 414 i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 414 VSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp ETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 45532 477776654 8999999999999999887654
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.64 E-value=5.1e-14 Score=139.07 Aligned_cols=336 Identities=15% Similarity=0.092 Sum_probs=207.2
Q ss_pred eEEcCCCCCCCCChHHHHHHHHHHHHcCC-CC------CCCCCCCHHHHHHHHHHHHHHhCCCCCCC--cEEEeCChHHH
Q 012095 97 VIRLAAGEPDFDTPVLIAEAGINAIREGF-TR------YTPNAGTLELRSAICHKLKEENGLSYTPD--QILVSNGAKQS 167 (471)
Q Consensus 97 ~i~l~~g~~~~~~p~~v~~a~~~~~~~~~-~~------Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~a 167 (471)
-|.|=..++. .++.+.+++-..+.+.. -+ |+...-..++.....++..+.||.....+ ||-.-+|+ .|
T Consensus 56 ~ieLIASEN~--~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs-~A 132 (490)
T 3ou5_A 56 GLELIASENF--CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS-PA 132 (490)
T ss_dssp SEECCTTCCC--CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HH
T ss_pred CceEecCCCc--CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHH-HH
Confidence 4777777765 35677777776665432 22 33333345666666677888899655443 55555555 55
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCCChHHH--------HHHcC--CEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcC
Q 012095 168 ILQAVLAVCSPGDEVIIPAPFWVSYPEM--------ARIAD--ATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCS 236 (471)
Q Consensus 168 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~--------~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~ 236 (471)
...++.+|++|||+|+..+....++... ....| .+.+.++++++ +..+|.|++++... .+||+|+.-.
T Consensus 133 N~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~-t~~IDyd~~~~~A~~~kPklIi~G~ 211 (490)
T 3ou5_A 133 NLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPK-TGLIDYNQLALTARLFRPRLIIAGT 211 (490)
T ss_dssp HHHHHHHHCC-CCCEECBC----------------------------CBCEETT-TTEECHHHHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCC-CCcccHHHHHHHHhhcCCCeEEECC
Confidence 6668999999999999888766554321 11222 24555666654 45799999999764 5899888743
Q ss_pred CCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccCCCCccccccCCCCCCceEEEecCCcccCccchhheeeEc
Q 012095 237 PSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYAPATHTSFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG 316 (471)
Q Consensus 237 p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~ 316 (471)
-.+| ..++ ++++.++|.+. |.++++|-+|.-....+...++..... .++..|..|+| .|-|-|.+.+
T Consensus 212 SaY~--r~id---~~~~reIAd~v-GA~Lm~DmAHiaGLVA~g~~psP~~~A-----DvVTtTTHKTL--rGPrGG~Il~ 278 (490)
T 3ou5_A 212 SAYA--RLID---YARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPFKHA-----DIVTTTTHKTL--RGARSGLIFY 278 (490)
T ss_dssp SSCC--SCCC---HHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSSTT--CSCSCEEEEE
T ss_pred ccCc--cccC---HHHHHHHHhhc-ccEEEechhhhhhhhcccccCCccccc-----eEEeccccccc--cCCCceEEEe
Confidence 3333 3456 78888888898 999999999874333232333333322 28899999997 7889999988
Q ss_pred CH---------------HHHHHHHHHHhcccCCCChHHHHHHHH-HHhccCCChHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012095 317 PK---------------HFVAACNKIQSQFTSGASSISQKAGVA-ALGLGYAGGEVVSKMVKAFRERRDFLVKSFGELEG 380 (471)
Q Consensus 317 ~~---------------~~i~~l~~~~~~~~~~~~~~~q~aa~~-~L~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g 380 (471)
++ ++.+++.+..-+...+.+-.-..|+.+ ++.+. .........+...++.+.|.+.|.+. |
T Consensus 279 ~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea--~~p~fk~Ya~qVv~NAkaLA~~L~~~-G 355 (490)
T 3ou5_A 279 RKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQA--CTPMFREYSLQVLKNARAMADALLER-G 355 (490)
T ss_dssp ECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHH--HSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred ccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHH--HhHhHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 65 567777776555444444444433333 23321 12345666677778888899999887 8
Q ss_pred CeeeC-CCcceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHcCCEEEE----CCCC-CCCCCcEEEEeec------CH
Q 012095 381 VKMSE-PQGAFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDKAQVALV----PGDA-FGDDTCIRISYAA------SL 448 (471)
Q Consensus 381 ~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~~gV~v~----pg~~-f~~~~~iRis~~~------~~ 448 (471)
+.+.. ...+..+++++... + .+. .-++.+|++.||.+. |+.. ...+..|||.... .+
T Consensus 356 ~~vvsGgTdnHlvLvDl~~~-g---------~tG-~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e 424 (490)
T 3ou5_A 356 YSLVSGGTDNHLVLVDLRPK-G---------LDG-ARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFRE 424 (490)
T ss_dssp CEEGGGSCSSSEEEEECGGG-T---------CCH-HHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCH
T ss_pred CeeecCCCCceEEEEecccc-C---------CCH-HHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCH
Confidence 88763 33356678887543 1 133 445556778899875 4431 0124579998753 67
Q ss_pred HHHHHHHHHHHHHHH
Q 012095 449 TTLQAAVERIKKGLL 463 (471)
Q Consensus 449 e~i~~~~~~l~~~l~ 463 (471)
+++++..+-|.+++.
T Consensus 425 ~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 425 DDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 889888888887764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.58 E-value=1.1e-13 Score=138.97 Aligned_cols=314 Identities=18% Similarity=0.173 Sum_probs=191.7
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCC----CCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSP----GDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~----gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
+...+.+.+..++.+..|.+ +....++++|+|.+...++.+.+++ ++.|+++.-+|.+...++.++|+.++.++.
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 35567778888888888865 3455688889885555555555554 899999999999999999999999999976
Q ss_pred CC-CCCCcCCHHHHHhhhcc---CCcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCCccccC-CCCcc
Q 012095 209 RI-SENFLLDPKVLESKLTE---KSRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYEHIIYA-PATHT 282 (471)
Q Consensus 209 ~~-~~~~~ld~e~l~~~l~~---~~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~~~~~~-~~~~~ 282 (471)
.. ++.+.+|++.|+++|.+ +.+++++.+| ++.+|.+-+ +++|+++|++| |+++++|++|+..... .....
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~-gi~l~VD~A~G~~~~~~~~l~~ 249 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANY-DIPHVVNNAYGLQSSKCMHLIQ 249 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHC-CCeEEEECCCchhhhhhHhHHH
Confidence 43 23578999999999965 2456666666 455678888 99999999999 9999999999853210 00000
Q ss_pred ccccCCCCCCceEEEecCCcccCccchhheeeEc-CHHHHHHHHHHHhcccCCCChHHHHHHHHHHhccCCChHHHHHHH
Q 012095 283 SFASLPGMWERTLTVNGFSKAFAMTGWRLGYIAG-PKHFVAACNKIQSQFTSGASSISQKAGVAALGLGYAGGEVVSKMV 361 (471)
Q Consensus 283 ~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~v~~-~~~~i~~l~~~~~~~~~~~~~~~q~aa~~~L~~~~~~~~~~~~~~ 361 (471)
...... .-..++.|..|++.. -.-.+++.. +++.++++..... .....+++.......+.. ..+.+.+..
T Consensus 250 ~a~~~~---~AD~~v~S~HK~l~a-~~~~~~l~~rd~~~~~~~~~~~~--g~~s~SpsL~l~~~l~~~---G~~g~~~~i 320 (450)
T 3bc8_A 250 QGARVG---RIDAFVQSLDKNFMV-PVGGAIIAGFNEPFIQDISKMYP--GRASASPSLDVLITLLSL---GCSGYRKLL 320 (450)
T ss_dssp HHHHHS---CCCEEEEEHHHHHSC-CSSCEEEEESCHHHHHHHHHHSC--SCBCSHHHHHHHHHHHHH---HHHHHHHHH
T ss_pred HHhccc---CCCEEEECCccCCCc-hhccEEEEecCHHHHHHHHHHhh--cCCcccHHHHHHHHHHHH---HHHHHHHHH
Confidence 111111 223678899999853 333455554 6666666644321 111223333333333332 244556666
Q ss_pred HHHHHHHHHHHHHhcCCC---CCeeeCCCc-ceEEeEecCCccCCcccCCCCCCCHHHHHHHHHHc--CCEEEEC-----
Q 012095 362 KAFRERRDFLVKSFGELE---GVKMSEPQG-AFYLFIDFSTYYGSEAEGFGKIENSESLCRYLLDK--AQVALVP----- 430 (471)
Q Consensus 362 ~~~~~~r~~l~~~L~~~~---g~~~~~p~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Ll~~--~gV~v~p----- 430 (471)
++..+..+++.+.+++++ |..+..... +.-..+.++..... . ..|...+.-.+... .|.-+.+
T Consensus 321 ~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~--~----~~D~tkl~i~~~~~g~sG~~v~~~~~~~ 394 (450)
T 3bc8_A 321 KERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGH--H----DKAVTQLGSMLFTRQVSGARAVPLGNVQ 394 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSS--S----SCHHHHHHHHHHHTTCCSCEEECSCCEE
T ss_pred HHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccccc--c----cCCCceeEEEecCCCCccceeeeccccc
Confidence 666666777777776665 665543221 11111223211000 0 01445566555443 2334431
Q ss_pred ---CCC---CC------CCCcEEEEeec--CHHHHHHHHHHHHHHHHhhC
Q 012095 431 ---GDA---FG------DDTCIRISYAA--SLTTLQAAVERIKKGLLTLR 466 (471)
Q Consensus 431 ---g~~---f~------~~~~iRis~~~--~~e~i~~~~~~l~~~l~~~~ 466 (471)
|.. |+ ...+|=+.++. +++++++++++|+++.++++
T Consensus 395 ~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~ 444 (450)
T 3bc8_A 395 TVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVR 444 (450)
T ss_dssp EETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111 22 12455554443 89999999999999877654
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=73.65 E-value=7.8 Score=39.29 Aligned_cols=113 Identities=12% Similarity=0.177 Sum_probs=69.1
Q ss_pred hCCCCCCCcEEEeCChHHHHHHHHHHh---cCC---------C-C-----eEEEcCCCCCC-------------------
Q 012095 149 NGLSYTPDQILVSNGAKQSILQAVLAV---CSP---------G-D-----EVIIPAPFWVS------------------- 191 (471)
Q Consensus 149 ~g~~~~~~~i~it~G~~~al~~~~~~l---~~~---------g-d-----~Vlv~~p~y~~------------------- 191 (471)
|.+.++++.|.|+.++..++...+++| +.. | . ..+.+.|.|+-
T Consensus 124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~ 203 (525)
T 3gh5_A 124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR 203 (525)
T ss_dssp EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence 334567788999888777766566655 222 1 1 13556676651
Q ss_pred hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 192 YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 192 ~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+.+..++.+....-+..+.+|.+..+.+.+.-..... .....+.|-.++++++++|++.|+++ ++-||
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~r-gI~VI 273 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAER-YIEVI 273 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTT-TCEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 234455667777666666566666665544443211110 00112346689999999999999999 88887
No 238
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=72.69 E-value=16 Score=32.70 Aligned_cols=98 Identities=14% Similarity=0.095 Sum_probs=57.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++.+-.-..........|.++..+..|- -|.+.+++.+..
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADI-----SDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 334566666655544566777888898887765443333444555577777777653 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.+.
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455544333333333 24577777776654
No 239
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=70.20 E-value=20 Score=32.11 Aligned_cols=98 Identities=10% Similarity=0.011 Sum_probs=48.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-.......+..+.++..+..|- -|.+.+++.+..
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV-----TNEADATAALAFAKQEFG 80 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccC-----CCHHHHHHHHHHHHHHcC
Confidence 344566666655544566777888898777665444444444455566666666543 266666665532
Q ss_pred CCcEEEEcCCCCCccc------CCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTGS------VYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~------~~~~~~l~~i~~l 256 (471)
+...++-+....+.+. ..+.+++++..++
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 115 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAV 115 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHHH
Confidence 4444443322222222 3566777766654
No 240
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=69.43 E-value=19 Score=32.86 Aligned_cols=99 Identities=14% Similarity=0.117 Sum_probs=56.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
++...++||.|+...=..+.+.|.+.|..|++.+-.-..........+.++..+..|- -|.+.+++++..
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDV-----SSAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 3444566666655544566777888898877765433333344555677777777653 266666665542
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 100 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 4dqx_A 100 GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSV 131 (277)
T ss_dssp SCCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 445444333333333 24567777766553
No 241
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=68.25 E-value=14 Score=33.89 Aligned_cols=99 Identities=8% Similarity=-0.007 Sum_probs=58.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----C
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----K 228 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~ 228 (471)
+..-++||.|++..=..+.+.|.+.|-.|++.+-.-......++..|.+...+..|- -|.+++++.+.. .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADS-----ANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334456665555544666777889998887765332233455666787777777653 266666665532 1
Q ss_pred CcEEEEcCC-CCCcc--cCCCHHHHHHHHHHH
Q 012095 229 SRLLILCSP-SNPTG--SVYPKNLLDEIARIV 257 (471)
Q Consensus 229 ~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l~ 257 (471)
.--++++|. .++.+ ..++.++|+++.++-
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 223455554 33333 246788888888763
No 242
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=68.15 E-value=45 Score=29.67 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=54.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|++.|..|++..-.-.......+..+.++..+..|. -|.+.+++++..
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV-----TSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHHHCC
Confidence 344566666555444566777788887777654443445555555566677776653 256666665542
Q ss_pred CCcEEEEcCCCCCccc--------CCCHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTGS--------VYPKNLLDEIAR 255 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~--------~~~~~~l~~i~~ 255 (471)
+..+++-+......+. ..+.+++++..+
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2o23_A 86 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLD 121 (265)
T ss_dssp CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCccccccccCCCCHHHHHHHHH
Confidence 4555543332222221 256666666554
No 243
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=66.42 E-value=78 Score=28.86 Aligned_cols=166 Identities=14% Similarity=0.062 Sum_probs=85.9
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCCCCCcEEEeC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEE-NGLSYTPDQILVSN 162 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~-~g~~~~~~~i~it~ 162 (471)
+....+.+.|-++|-|+.=..+.- -.+.+.++..+++.++.+ ....-+.+.+. ++. ..+| =++++-
T Consensus 38 ~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~-------~~~~~~~v~~~-r~~~~~~P----ivlm~Y 105 (271)
T 3nav_A 38 AIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTT-------PDICFELIAQI-RARNPETP----IGLLMY 105 (271)
T ss_dssp HHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCC-------HHHHHHHHHHH-HHHCTTSC----EEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCC-------HHHHHHHHHHH-HhcCCCCC----EEEEec
Confidence 445566677878877765442211 135677777788876521 12333333332 211 1222 122221
Q ss_pred Ch---HHHHHHHHHHhcCCC-CeEEEcCCCCCC---hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc
Q 012095 163 GA---KQSILQAVLAVCSPG-DEVIIPAPFWVS---YPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 163 G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~---~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
-. .-++...+..+.+-| |.|++++-.+.. +...++..|...+.+-.+ . -+.+.+++........||+.
T Consensus 106 ~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap--~---t~~eri~~i~~~~~gfiY~v 180 (271)
T 3nav_A 106 ANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPP--T---ASDETLRAVAQLGKGYTYLL 180 (271)
T ss_dssp HHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECT--T---CCHHHHHHHHHHCCSCEEEC
T ss_pred CcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHHCCCeEEEE
Confidence 00 112333444454555 888988765543 446678889987655532 1 14577777665555667765
Q ss_pred CCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEE
Q 012095 236 SPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 236 ~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
+-.--||..- ..+.+.++++.++++.++.+++
T Consensus 181 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 213 (271)
T 3nav_A 181 SRAGVTGAETKANMPVHALLERLQQFDAPPALL 213 (271)
T ss_dssp CCC--------CCHHHHHHHHHHHHTTCCCEEE
T ss_pred eccCCCCcccCCchhHHHHHHHHHHhcCCCEEE
Confidence 5444577642 1245667777777764667776
No 244
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=65.64 E-value=39 Score=30.51 Aligned_cols=98 Identities=7% Similarity=0.057 Sum_probs=57.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-..........|.++..+..|- -|.+.+++.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDL-----TNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCC-----CCHHHHHHHHHHHHHHcC
Confidence 334566666655544566777888898887766555566666666676666666543 266666665542
Q ss_pred CCcEEEEcCCCC-C-cc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSN-P-TG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~N-P-tG--~~~~~~~l~~i~~l 256 (471)
+...++-+.... + .+ ..++.+++++..++
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~v 117 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTV 117 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHHH
Confidence 445444333222 2 11 24577777766554
No 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=65.27 E-value=21 Score=32.36 Aligned_cols=96 Identities=13% Similarity=0.114 Sum_probs=54.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~ 229 (471)
..++||.|+...=..+.+.|++.|..|++..-.-..........+.++..+..|- -|.+.+++.+.. +.
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV-----TDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeC-----CCHHHHHHHHHHHHHhCCCC
Confidence 3556665554444556777888898887765544455556666666666666643 266666665532 45
Q ss_pred cEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 230 RLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 230 ~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
..++-+....+.+. ..+.++++++.+.
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 109 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFEL 109 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 55543333222222 4566666665543
No 246
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=65.04 E-value=82 Score=28.63 Aligned_cols=167 Identities=16% Similarity=0.158 Sum_probs=88.1
Q ss_pred HHHHHHHHhcCCCeEEcCCCCCCCC-ChHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEE-e
Q 012095 84 TDQATALAQAGVSVIRLAAGEPDFD-TPVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILV-S 161 (471)
Q Consensus 84 ~~~~~~~~~~g~~~i~l~~g~~~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~i-t 161 (471)
.+....+.+.|-++|.++.=..+.- --+.+.++..+++..+.+ ....-+.+.+. ++. +.++ | +++ +
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~-------~~~~~~~v~~i-r~~-~~~~-P--ivlm~ 102 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTT-------SSDCFDIITKV-RAQ-HPDM-P--IGLLL 102 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCC-------HHHHHHHHHHH-HHH-CTTC-C--EEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCC-------HHHHHHHHHHH-Hhc-CCCC-C--EEEEe
Confidence 3455667778888888775443321 246677777788876521 12333333332 211 1111 1 333 2
Q ss_pred C-Ch--HHHHHHHHHHhcCCC-CeEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE
Q 012095 162 N-GA--KQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 162 ~-G~--~~al~~~~~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i 234 (471)
- +- .-++...+..+.+-| |.|++++-.+. .+...++..|.+.+.+-.+ . -+.+.+++........|++
T Consensus 103 Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP--~---t~~eri~~i~~~~~gfvY~ 177 (267)
T 3vnd_A 103 YANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPP--N---ADADTLKMVSEQGEGYTYL 177 (267)
T ss_dssp CHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECT--T---CCHHHHHHHHHHCCSCEEE
T ss_pred cCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECC--C---CCHHHHHHHHHhCCCcEEE
Confidence 2 11 112344455555556 88888875543 3455678889887655432 1 2567777766655556777
Q ss_pred cCCCCCcccCC-CHHHHHHHHHHHHhCCCeEEEE
Q 012095 235 CSPSNPTGSVY-PKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 235 ~~p~NPtG~~~-~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
.+-.--||..- -.+++.++++.++++.++.|++
T Consensus 178 vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 178 LSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp SCCCCCC--------CHHHHHHHHHTTTCCCEEE
T ss_pred EecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE
Confidence 55554577653 1233666666666653566665
No 247
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=64.21 E-value=31 Score=31.00 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=50.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|++.|..|++.+-.-......+...++..+..++. |.+.+++.+..
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~-------~~~~v~~~~~~~~~~~g 98 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFS-------CETGIMAFIDLLKTQTS 98 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTT-------SHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCC-------CHHHHHHHHHHHHHhcC
Confidence 44567776665554456677788888777665443333344455566655444332 56666655532
Q ss_pred CCcEEEEcCCCC-CcccCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSN-PTGSVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~N-PtG~~~~~~~l~~i~~l 256 (471)
+..+++-+.... +.....+.++++++.++
T Consensus 99 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~v 128 (260)
T 3gem_A 99 SLRAVVHNASEWLAETPGEEADNFTRMFSV 128 (260)
T ss_dssp CCSEEEECCCCCCCCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCCCCCHHHHHHHHHH
Confidence 345444333222 22234455556555543
No 248
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=62.24 E-value=29 Score=31.13 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=54.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|++.|..|++.+-.-..........+.++..+..|- -|.+.+++.+.+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV-----TRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeC-----CCHHHHHHHHHHHHHHcC
Confidence 334567776665554566777888898877755433333344555566666666653 266666665532
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.+++++..++
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFAI 112 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 445444333322222 24566777765543
No 249
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=61.28 E-value=24 Score=32.00 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=53.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-.......+..|.++..+..|- -|.+.+++.+..
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANL-----SDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeec-----CCHHHHHHHHHHHHHHcC
Confidence 344566666555544566777888898777655433333445556677777777653 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAV 131 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333222222 23455566655443
No 250
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=61.22 E-value=22 Score=32.50 Aligned_cols=98 Identities=10% Similarity=-0.009 Sum_probs=53.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-.......+..+.++..+..|- -|.+.+++.+..
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDV-----SDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334456655554444556677788898877655433233344455566666666643 266666665532
Q ss_pred CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+. ..+.++++++.++
T Consensus 103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4454443333222222 4577777776554
No 251
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=61.11 E-value=50 Score=29.37 Aligned_cols=97 Identities=7% Similarity=-0.025 Sum_probs=54.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...-..+.+.|.+.|-.|++.+-.-...... ++..|.++..+..|-. |.+.+++.+..
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHh
Confidence 344566766665555566777888897777655433333333 3344778888877642 56666655532
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|.. .+.+ ...+.+++++..++
T Consensus 81 ~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (252)
T 3h7a_A 81 HAPLE-VTIFNVGANVNFPILETTDRVFRKVWEM 113 (252)
T ss_dssp HSCEE-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCce-EEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 233 4454442 2222 24666777666553
No 252
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=60.30 E-value=82 Score=28.52 Aligned_cols=99 Identities=14% Similarity=0.153 Sum_probs=56.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-------Ch---HHHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-------SY---PEMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-------~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
++...++||.|+...=..+.+.|.+.|..|++..-.-. .. ...+...|.++..+..|-. |.+.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 34456677766655556677778888977776443222 11 2334456788888877542 666666
Q ss_pred hhhcc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 223 SKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 223 ~~l~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+.+.. +...++-|....+.+ ...+.++++++.++
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 65532 445444333323223 24577777776654
No 253
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=60.03 E-value=24 Score=35.60 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=63.2
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHh---cCCC---------C-----eEEEcCCCCCC-------------------hHH
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAV---CSPG---------D-----EVIIPAPFWVS-------------------YPE 194 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l---~~~g---------d-----~Vlv~~p~y~~-------------------~~~ 194 (471)
+.++.+.|.|+.++..++...+++| +..+ . ..+.+.|.|.- +.+
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id 181 (512)
T 1jak_A 102 LDSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYID 181 (512)
T ss_dssp EEEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHH
T ss_pred EEEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHH
Confidence 3456678888877766665555554 2221 1 23455666641 223
Q ss_pred HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 195 MARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 195 ~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
.+..++.+...+-+..+.+|.+..+...++...... .......|-.++.+++++|++.|+++ ++-||
T Consensus 182 ~ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~r-gI~VI 248 (512)
T 1jak_A 182 RVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASR-HLEVV 248 (512)
T ss_dssp HHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHc-CCEEE
Confidence 344556666555555445565554443332111100 01112236789999999999999999 89888
No 254
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=59.64 E-value=34 Score=30.48 Aligned_cols=99 Identities=11% Similarity=0.085 Sum_probs=55.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
++...++||.|+...=..+.+.|++.|-.|++.+-.-.......+..+.++..+..|-. |.+.+++.+..
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 81 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKF 81 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 34456667666655445667778888877776654333334455556777777776532 55666655532
Q ss_pred -CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+... .+.+ ...+.+++++..++
T Consensus 82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 3n74_A 82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGV 114 (261)
T ss_dssp SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 44544433322 2122 23476777665543
No 255
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=59.59 E-value=60 Score=29.84 Aligned_cols=76 Identities=11% Similarity=0.133 Sum_probs=50.8
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
-|.|.++.++......+++.+-+.++ .-.+.+++++..+.+.+++.+. | ++.++.+++.+.|+++ ++.+
T Consensus 50 ~~vy~sl~el~~~~~~D~viI~tP~~----~~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~-gv~l 118 (288)
T 2nu8_A 50 LPVFNTVREAVAATGATASVIYVPAP----FCKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEA-GVRM 118 (288)
T ss_dssp EEEESSHHHHHHHHCCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred eeccCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 35577777776643555555544332 3677788888878887665333 3 3567788999999999 8988
Q ss_pred EEccCCC
Q 012095 266 LSDEIYE 272 (471)
Q Consensus 266 i~De~y~ 272 (471)
+-..+.+
T Consensus 119 iGPNc~G 125 (288)
T 2nu8_A 119 IGPNTPG 125 (288)
T ss_dssp ECSSCCE
T ss_pred EecCCcc
Confidence 8665543
No 256
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=58.98 E-value=20 Score=32.56 Aligned_cols=97 Identities=12% Similarity=0.052 Sum_probs=53.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----CC
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----KS 229 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~~ 229 (471)
...++||.|+...=..+.+.|++.|..|++.+-.-..........+.++..+.+|-. |.+.+++.+.. +.
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHTTSSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHhCCC
Confidence 345666665555445667778888988776554322333445556777777776532 55666655432 22
Q ss_pred cEEEEcCC-CCCcc-------cCCCHHHHHHHHHH
Q 012095 230 RLLILCSP-SNPTG-------SVYPKNLLDEIARI 256 (471)
Q Consensus 230 ~~i~i~~p-~NPtG-------~~~~~~~l~~i~~l 256 (471)
..++.++. ..+.+ ...+.+++++..++
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDL 139 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHH
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHHH
Confidence 33333312 22222 34676667666554
No 257
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=58.71 E-value=23 Score=31.91 Aligned_cols=99 Identities=12% Similarity=0.115 Sum_probs=57.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEE
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLL 232 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i 232 (471)
+-.-++||.|++..=..+.+.|.+.|-.|++.+-.- ......++..|.+...+..|-. |.+.+++.+....--|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCCE
Confidence 334455555555444566777888997776654321 1234556678888888877642 4445555554333335
Q ss_pred EEcCCC-CCcc--cCCCHHHHHHHHHHH
Q 012095 233 ILCSPS-NPTG--SVYPKNLLDEIARIV 257 (471)
Q Consensus 233 ~i~~p~-NPtG--~~~~~~~l~~i~~l~ 257 (471)
++||.. ++.+ ..++.++|+++.++=
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vN 110 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVN 110 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHH
Confidence 666652 2222 356888898888763
No 258
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.51 E-value=45 Score=30.12 Aligned_cols=98 Identities=9% Similarity=0.064 Sum_probs=57.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
++...++||.|++..=..+.+.|.+.|-.|++.+-.-.... ..++..|.++..+..|-. |.+++++.+.+
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHH
Confidence 34445566655555446667778889988887653221112 223456888888887642 56666655532
Q ss_pred ----CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|. .++.+ ..++.++|+++.++
T Consensus 82 ~~~G~iD-iLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVD-ILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCC-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCc-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 233 455554 23333 24688888887765
No 259
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=57.96 E-value=24 Score=35.58 Aligned_cols=107 Identities=15% Similarity=0.140 Sum_probs=61.8
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---CC---CC-----eEEEcCCCCCC-------------------hHHHHHHcC
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAVC---SP---GD-----EVIIPAPFWVS-------------------YPEMARIAD 200 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l~---~~---gd-----~Vlv~~p~y~~-------------------~~~~~~~~G 200 (471)
+.++++.|.|+..+..++...+++|. .. |. ..+.+.|.|.- +.+.+..++
T Consensus 96 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~K 175 (507)
T 2gjx_A 96 LTINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNK 175 (507)
T ss_dssp EEESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTT
T ss_pred EEEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 34566778888777766665666552 11 21 23445566541 223344556
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
.++...-+..+.+|.+..+.+.+...... ..|.|-.++++++++|++.|+++ ++-||
T Consensus 176 lN~lh~HltDdq~wr~ei~~~P~Lt~~Ga--------~~~~~~~YT~~di~eiv~yA~~r-gI~VI 232 (507)
T 2gjx_A 176 LNVFHWHLVDDPSFPYESFTFPELMRKGS--------YNPVTHIYTAQDVKEVIEYARLR-GIRVL 232 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCTHHHHHHS--------SCTTTSCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred CceEEEEEecccCeeeeccccchhhhccc--------cCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 66655555544455554332222111000 12446679999999999999999 88888
No 260
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=57.50 E-value=60 Score=28.72 Aligned_cols=97 Identities=11% Similarity=0.053 Sum_probs=51.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
...++||.|+...=..+.+.|.+.|..|++.+-.- ......++..|.++..+..|-. |.+.+++.+..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHHHHcC
Confidence 34566666555544566777888887776643222 1122233445667777766532 56666665432
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (249)
T 2ew8_A 82 RCDILVNNAGIYPLIPFDELTFEQWKKTFEI 112 (249)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333222222 23566667666553
No 261
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=56.97 E-value=46 Score=29.32 Aligned_cols=98 Identities=13% Similarity=0.077 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++..-.-..... .++..|.++..+..|. -|.+.+++.+.+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNI-----SDIESIQNFFAEIKA 78 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34456666665554456677788888877765433222222 2334477777777653 266666665532
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+....+.+ ...+.+++++..+.
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 112 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINT 112 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 345444333222222 24566777666553
No 262
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=56.40 E-value=36 Score=30.30 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=52.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-.......+..+.+...+.+|- -|.+.+++.+..
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNV-----TNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 344566666655544566777888898877654332223334444444455565543 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.+++++..++
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 113 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMET 113 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 445444333222222 24577777766654
No 263
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=56.36 E-value=30 Score=30.97 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=54.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++.+-.-.......+..|.++..+..|- -|.+.+++.+..
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDI-----ADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccC-----CCHHHHHHHHHHHHHHhC
Confidence 345677776666555667777888898777655432233344445566777777653 256666655432
Q ss_pred CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|.. .+.+ ...+.+++++..++
T Consensus 82 ~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 82 AID-LLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SEE-EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 333 4454442 2222 23477777776654
No 264
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=56.36 E-value=27 Score=31.69 Aligned_cols=98 Identities=12% Similarity=0.170 Sum_probs=54.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC---------ChH------HHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV---------SYP------EMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~---------~~~------~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
....++||.|+...=..+.+.|.+.|..|++.+-... ... ..+...|.++..+.+|- -|.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV-----RDR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccC-----CCH
Confidence 3345666666555445667778888977776432210 111 12344577777777653 266
Q ss_pred HHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 219 KVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 219 e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
+.+++.+.+ +..+++-+....+.+...+.+++++..++
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 666665532 44544433333333444777777776654
No 265
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=56.33 E-value=49 Score=29.27 Aligned_cols=95 Identities=15% Similarity=0.151 Sum_probs=47.8
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...++||.|+...=..+.+.|.+.|..|++..-.-.......+..|...+..++ -|.+.+++.+.. +
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-------CCHHHHHHHHHHHHHHcCC
Confidence 345666655554445566777788877776432211122233333544433332 256666665542 3
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
..+++-+....+.+ ...+.++++++.++
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 45444332222222 23566777766654
No 266
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=56.12 E-value=79 Score=29.17 Aligned_cols=77 Identities=12% Similarity=0.144 Sum_probs=50.2
Q ss_pred cCCCCCChHHHHHHcC-CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 185 PAPFWVSYPEMARIAD-ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
..|.|.+..++....+ .++..+-+.++ .-++.+++++..+.+.+++.+. | ++.++.++|.+.|+++ ++
T Consensus 55 G~~vy~sl~el~~~~~~~DvaIi~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi 123 (297)
T 2yv2_A 55 GVPVYDSVKEALAEHPEINTSIVFVPAP----FAPDAVYEAVDAGIRLVVVITE----G--IPVHDTMRFVNYARQK-GA 123 (297)
T ss_dssp TEEEESSHHHHHHHCTTCCEEEECCCGG----GHHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHH-TC
T ss_pred CEeeeCCHHHHhhcCCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CC
Confidence 3456677776665323 45444433322 3677788888878886665332 3 3567789999999999 89
Q ss_pred EEEEccCCC
Q 012095 264 LVLSDEIYE 272 (471)
Q Consensus 264 ~ii~De~y~ 272 (471)
.++-.++..
T Consensus 124 ~viGPNc~G 132 (297)
T 2yv2_A 124 TIIGPNCPG 132 (297)
T ss_dssp EEECSSSCE
T ss_pred EEEcCCCCe
Confidence 888666554
No 267
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=55.95 E-value=50 Score=29.83 Aligned_cols=98 Identities=6% Similarity=-0.016 Sum_probs=54.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++.+-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 99 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDV-----TSESEIIEAFARLDE 99 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 444566666555544566777888898888765432222222 234577777777653 266666665542
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.+++++..++
T Consensus 100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 344444333222222 24577777766554
No 268
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=55.67 E-value=15 Score=33.78 Aligned_cols=69 Identities=9% Similarity=0.006 Sum_probs=42.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+...++||.|+...=..+.+.|++.|-.|++..-.-.......+..+.++..+..|- -|.+.+++.+..
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~ 83 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDL-----QDLSSVRRFADG 83 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCT-----TCHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCC-----CCHHHHHHHHHh
Confidence 345667776655544666777888887777654332223334445566777777653 267777776653
No 269
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=55.50 E-value=73 Score=28.71 Aligned_cols=98 Identities=8% Similarity=0.070 Sum_probs=54.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
++..-++||.|++..=..+.+.|.+.|-.|++.+-.-.. ........|.+...+.+|-. |.+++++.+.+
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~ 79 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIA 79 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHH
Confidence 343445555555444455667788888766654432222 22334456777777776532 55666555432
Q ss_pred ---CCcEEEEcCC--CCCcccCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSP--SNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p--~NPtG~~~~~~~l~~i~~l 256 (471)
+.. ++++|. +.+.....+.++|+++.++
T Consensus 80 ~~G~iD-iLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 80 TFGRLD-GLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHSCCC-EEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HhCCCC-EEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 333 456554 2344456778888777664
No 270
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=55.14 E-value=55 Score=29.04 Aligned_cols=96 Identities=13% Similarity=0.069 Sum_probs=50.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KS 229 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~ 229 (471)
..++||.|+...=..+.+.|.+.|..|++.+-.-.......+..|.++..+..|- -|.+.+++.+.. +.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDV-----SSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCT-----TCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4566665544444556677778888777654332222233333466666676643 266666665532 34
Q ss_pred cEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 230 RLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 230 ~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+++-+....+.+ ...+.+++++..++
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKI 110 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHh
Confidence 5444333222222 23466667665553
No 271
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=54.48 E-value=32 Score=30.30 Aligned_cols=95 Identities=9% Similarity=0.201 Sum_probs=49.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~ 230 (471)
.++||.|+...=..+.+.|.+.|..|++.+-.-..........+.++..+..|- -|.+.+++.+.. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADL-----AHHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCT-----TSHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCC-----CCHHHHHHHHHHHHHhcCCCc
Confidence 466666655544556677788888777654332223333333344566666543 256666655532 345
Q ss_pred EEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 231 LLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 231 ~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+++-+....+.+. ..+.++++++.++
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 4443333322222 3577777776654
No 272
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=53.81 E-value=80 Score=28.87 Aligned_cols=98 Identities=12% Similarity=0.112 Sum_probs=52.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH---cC-CEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---AD-ATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++.+-.-......... .| .++..+..|- -|.+.+++.+..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDV-----SDPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeC-----CCHHHHHHHHHHHH
Confidence 334556665555444556777888897777655443333333332 23 4666666653 266666655432
Q ss_pred ----CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+. ..+.++++++.++
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444443332233232 4577777776664
No 273
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=53.33 E-value=73 Score=28.30 Aligned_cols=95 Identities=9% Similarity=0.090 Sum_probs=49.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-hHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
..++||.|+...=..+.+.|.+.|..|++..-.-.. .....+. .|.++..+..|- -|.+.+++.+..
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-----SKGEAVRGLVDNAVR 79 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-----TSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 345666555444455667778888877765433222 2222221 166777776653 266666665542
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+...++-+....+.+ ...+.+++++..+
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455444333222222 2356677766555
No 274
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=52.94 E-value=38 Score=30.58 Aligned_cols=97 Identities=7% Similarity=0.025 Sum_probs=57.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+..-++||.|++..=..+.+.|.+.|-.|++.+-.-.... ..++..|.++..+..|-. |.+++++.+++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 3344556555554445566678888988777543221122 234556888888887642 66676665532
Q ss_pred ---CCcEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPS--NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~--NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|.. .+.+ ..++.++|+++.++
T Consensus 81 ~~G~iD-iLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRID-VLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCC-EEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCC-EEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 333 5566652 3334 35788889888775
No 275
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=52.83 E-value=1.2e+02 Score=26.69 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=49.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
..++||.|+...=..+.+.|.+.|..|++..-.-. .....+...|.++..+..|. -|.+.+++++.. +
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADL-----SDVAQIEALFALAEREFGG 79 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCT-----TSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCC-----CCHHHHHHHHHHHHHHcCC
Confidence 45666655554445667777888877776543222 11112223366677776643 266777666542 4
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
..+++-+....+.+ ...+.++++++.+
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 55554333222222 2346666665554
No 276
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=52.67 E-value=68 Score=28.93 Aligned_cols=97 Identities=12% Similarity=0.154 Sum_probs=52.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
...++||.|+...=..+.+.|.+.|-.|++..-.-....... ...|.++..+..|-. |.+.+++.+..
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345666666555445667778888987776543322222222 234777777776532 66666665532
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+......+ ..++.++++++.++
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 445444332222222 23577777776654
No 277
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=52.07 E-value=62 Score=29.07 Aligned_cols=98 Identities=11% Similarity=0.143 Sum_probs=51.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
....++||.|+...=..+.+.|.+.|-.|++..-.-....... +..|.++..+..|- -|.+.+++++..
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-----SNYEEVKKLLEAVK 94 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3345666655555445667778888877776543211112222 22366777776653 266666665542
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+......+ ...+.++++++.++
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 345444333222222 23566777766554
No 278
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=51.69 E-value=58 Score=30.08 Aligned_cols=76 Identities=9% Similarity=0.139 Sum_probs=49.5
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
.|.|.+..++......+++.+-+.++ .-++.+++++..+.+.+++.+. | ++.++.++|.+.|+++ ++.+
T Consensus 56 ~~vy~sl~el~~~~~~Dv~ii~vp~~----~~~~~v~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~A~~~-gi~v 124 (294)
T 2yv1_A 56 VPVFDTVKEAVKETDANASVIFVPAP----FAKDAVFEAIDAGIELIVVITE----H--IPVHDTMEFVNYAEDV-GVKI 124 (294)
T ss_dssp EEEESSHHHHHHHHCCCEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred EeeeCCHHHHhhcCCCCEEEEccCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 35567777766633555544443322 3567777777778886665322 3 2567789999999999 8988
Q ss_pred EEccCCC
Q 012095 266 LSDEIYE 272 (471)
Q Consensus 266 i~De~y~ 272 (471)
+-.++.+
T Consensus 125 iGPNc~G 131 (294)
T 2yv1_A 125 IGPNTPG 131 (294)
T ss_dssp ECSSCCE
T ss_pred EcCCCce
Confidence 8666554
No 279
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=51.58 E-value=69 Score=28.53 Aligned_cols=97 Identities=11% Similarity=0.037 Sum_probs=52.5
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
...++||.|+...=..+.+.|++.|..|++..-.-..... .+...|.++..+.+|.. |.+.+++.+..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHh
Confidence 3456666555544455667778888777765433222222 22345777777776532 66666665532
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+... .+.+ ...+.++++++.++
T Consensus 104 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~v 137 (262)
T 3rkr_A 104 HGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAV 137 (262)
T ss_dssp HSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCccCCCCCcccCCHHHHHHHHHH
Confidence 45555544332 2333 23566777666543
No 280
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=51.48 E-value=54 Score=29.21 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=53.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-..... .++..|.++..+..|- -|.+.+++.+..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 85 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNV-----TDEQHREAVIKAALD 85 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHH
Confidence 44456666555554456677788888777765433222222 2334577777777653 266666665532
Q ss_pred ---CCcEEEEcCCCC-CcccCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSN-PTGSVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~N-PtG~~~~~~~l~~i~~l 256 (471)
+...++-+.... +.....+.+++++..++
T Consensus 86 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~v 118 (256)
T 3gaf_A 86 QFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKL 118 (256)
T ss_dssp HHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHH
Confidence 445444333222 22225677777766553
No 281
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=51.22 E-value=69 Score=29.32 Aligned_cols=98 Identities=5% Similarity=0.107 Sum_probs=53.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-------C--CCh------HHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------W--VSY------PEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-------y--~~~------~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
....++||.|+...=..+.+.|.+.|..|++.+-. . ..- ...++..|.++..+.+|- -|.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV-----RDF 101 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC-----CCH
Confidence 44456666665554456677788889877764322 0 011 122344577787777754 266
Q ss_pred HHHHhhhcc------CCcEEEEcCCCCCcc---cCCCHHHHHHHHHH
Q 012095 219 KVLESKLTE------KSRLLILCSPSNPTG---SVYPKNLLDEIARI 256 (471)
Q Consensus 219 e~l~~~l~~------~~~~i~i~~p~NPtG---~~~~~~~l~~i~~l 256 (471)
+.+++.+.. +..+++.|....+.+ ..++.+++++..++
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 148 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 666665542 445444333222222 23577777776654
No 282
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=50.67 E-value=82 Score=28.44 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=54.3
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+....++||.|+...=..+.+.|.+.|-.|++..-.-...... +...|.++..+..|- -|.+.+++.+..
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDV-----TQPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 3445667766665544566777888897777654433333322 334466666666653 266666665542
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 139 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDT 139 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455544333222222 24577777766554
No 283
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=50.49 E-value=73 Score=28.62 Aligned_cols=95 Identities=11% Similarity=0.093 Sum_probs=50.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
.++||.|+...=..+.+.|.+.|..|++..-.-...... ++..|.++..+.+|- -|.+.+++.+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV-----TDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 455555554444556667788897777654322222222 334477887777653 256666665532
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333223322 24577777766654
No 284
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=50.28 E-value=1.7e+02 Score=27.52 Aligned_cols=96 Identities=10% Similarity=0.102 Sum_probs=52.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----------hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhh
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----------YPEMARIADATPVILPTRISENFLLDPKVLESK 224 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----------~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~ 224 (471)
...++||.|+...=..+.+.|.+.|-.|++..-.-.. ....++..|.++..+.+|- -|.+.++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-----~d~~~v~~~ 119 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-----RDEQQISAA 119 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-----CCHHHHHHH
Confidence 3455666555544455677788889777664322221 2233455688888887754 266666666
Q ss_pred hcc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 225 LTE------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 225 l~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+.. +..+++-|......+ ...+.++++++.+
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 542 444444333222222 3456677766554
No 285
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=50.13 E-value=1.1e+02 Score=27.32 Aligned_cols=100 Identities=17% Similarity=0.109 Sum_probs=60.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEE-E--cCC------CC-----CChHHHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVI-I--PAP------FW-----VSYPEMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vl-v--~~p------~y-----~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
-+++.+|+......+..+. +.|-.|. + .-| .| ......++..|.....+++..+.+ --.+.+.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~--~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE--KEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch--HHHHHHH
Confidence 4667788888887666544 4564443 2 111 11 123457888999888887753221 2357777
Q ss_pred hhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 012095 223 SKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 223 ~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
+++.+ ...+++ +|.+.+..++..+-++|.+. |+..+.
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~-gl~~~~ 121 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKEL-GLEVYT 121 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHT-TCEEEC
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHc-CCEEEc
Confidence 77754 455665 69999988899999999998 887773
No 286
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=50.11 E-value=1.4e+02 Score=26.67 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=54.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-------ChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-------SYP---EMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-------~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
++...++||.|+...=..+.+.|.+.|..|++..-.-. ... ......|.++..+..|-. |.+.++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 78 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQVR 78 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHH
Confidence 34456666666655445667778888877776533221 122 223445888888887642 666666
Q ss_pred hhhcc------CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 223 SKLTE------KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 223 ~~l~~------~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+.+.. +...+ |+|. ....+ ...+.++++++.++
T Consensus 79 ~~~~~~~~~~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~v 120 (274)
T 3e03_A 79 AAVAATVDTFGGIDIL-VNNASAIWLRGTLDTPMKRFDLMQQV 120 (274)
T ss_dssp HHHHHHHHHHSCCCEE-EECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEE-EECCCcccCCCcccCCHHHHHHHHhH
Confidence 65532 34444 4443 22222 23576777766553
No 287
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=50.07 E-value=48 Score=29.49 Aligned_cols=96 Identities=8% Similarity=0.019 Sum_probs=48.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...++||.|+...=..+.+.|.+.|..|++.+-.-.......+..|.++..+..|- -|.+.+++.+.. +
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDV-----TIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 34566665555544566777788887776643221112223333355566666543 256666665532 4
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
...++-+....+.+ ...+.+++++..+
T Consensus 80 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 80 VDGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 45444333222222 2346666665554
No 288
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=50.02 E-value=33 Score=22.01 Aligned_cols=29 Identities=21% Similarity=0.119 Sum_probs=25.1
Q ss_pred cEEEEeec-CHHHHHHHHHHHHHHHHhhCC
Q 012095 439 CIRISYAA-SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 439 ~iRis~~~-~~e~i~~~~~~l~~~l~~~~~ 467 (471)
.+|||+.. +..+-+++...|-+++.++.+
T Consensus 3 rvrisitartkkeaekfaailikvfaelgy 32 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAELGY 32 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHhCc
Confidence 58999998 888999999999999888765
No 289
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=49.84 E-value=28 Score=35.05 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=61.3
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHhc---CC---CCe-----EEEcCCCCCC-------------------hHHHHHHcC
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAVC---SP---GDE-----VIIPAPFWVS-------------------YPEMARIAD 200 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l~---~~---gd~-----Vlv~~p~y~~-------------------~~~~~~~~G 200 (471)
+.++++.|.|+..+..++...+++|. .. |.. .+.+.|.|.. +.+.+..++
T Consensus 102 L~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~K 181 (507)
T 1now_A 102 LLVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNK 181 (507)
T ss_dssp EEECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTT
T ss_pred EEEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhC
Confidence 44667789888877776665666552 22 111 2445566541 223344556
Q ss_pred CEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 201 ATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 201 ~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
.+....-+..+.+|.+..+.+.++..... ..| |-.++.+++++|++.|+++ ++-||
T Consensus 182 lN~lh~HltDdq~wr~e~~~~P~Lt~~Ga--------~~~-~~~YT~~di~eiv~yA~~r-gI~VI 237 (507)
T 1now_A 182 FNVLHWHIVDDQSFPYQSITFPELSNKGS--------YSL-SHVYTPNDVRMVIEYARLR-GIRVL 237 (507)
T ss_dssp CCEEEEECCCSSCCCBCCSSCHHHHHHHS--------SST-TSCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred CcEEEEeeccCccceeeccchhhhhcccC--------cCC-CCCCCHHHHHHHHHHHHHc-CCEEE
Confidence 66555555444455554333222211000 012 6689999999999999999 88887
No 290
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=49.23 E-value=70 Score=28.75 Aligned_cols=96 Identities=9% Similarity=0.159 Sum_probs=51.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-------CC--ChH------HHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV--SYP------EMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-------y~--~~~------~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
....++||.|+...=..+.+.|++.|-.|++.+-. |. .-. ..+...|.++..+..|- -|.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~ 86 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV-----RDR 86 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCT-----TCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCC-----CCH
Confidence 44456666665554456677788889777764322 11 111 12344577787777654 266
Q ss_pred HHHHhhhcc------CCcEEEEcCCCCCcccCCCHHHHHHHHHH
Q 012095 219 KVLESKLTE------KSRLLILCSPSNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 219 e~l~~~l~~------~~~~i~i~~p~NPtG~~~~~~~l~~i~~l 256 (471)
+.+++.+.. +..+++-+....+.+. +.++++++.++
T Consensus 87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~~ 128 (278)
T 3sx2_A 87 ESLSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVIDV 128 (278)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHHH
Confidence 666666542 4454443333222222 56666666543
No 291
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=49.14 E-value=82 Score=27.34 Aligned_cols=95 Identities=6% Similarity=0.011 Sum_probs=52.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...=..+.+.|.+.|-.|++..-.-....... ...|.++..+..|- -|.+.+++.+..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 4666666555445567778888877776543322222222 24577787777653 267777776642
Q ss_pred -CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+...++.+....+.+. ..+.+++++..+.
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHH
Confidence 4555544333333332 3476777766554
No 292
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=49.06 E-value=1.1e+02 Score=27.65 Aligned_cols=95 Identities=7% Similarity=0.020 Sum_probs=49.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
..++||.|+...=..+.+.|++.|..|++..-.-...... ++..|.++..+..|. -|.+.+++++..
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV-----SKKEEISEVINKILTEH 119 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCC-----CCHHHHHHHHHHHHHhc
Confidence 3566665554444566777888898877643211111112 222366777776653 266777666532
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+....+.+ ...+.++++++.+
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 345544333222222 2346666666554
No 293
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=49.02 E-value=43 Score=30.22 Aligned_cols=99 Identities=9% Similarity=0.071 Sum_probs=53.1
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-Ch---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-SY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
+....++||.|+...=..+.+.|.+.|-.|++..-.-. .. ...++..|.++..+..|- -|.+.+++.+..
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV-----SQESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 34445666665555445667778888987766432111 11 122344567777777653 266666665532
Q ss_pred -----CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333222222 24577777776654
No 294
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=48.73 E-value=70 Score=29.31 Aligned_cols=98 Identities=9% Similarity=-0.002 Sum_probs=53.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|++.|-.|++.+-.-...... +...|.++..+.+|. -|.+.+++.+..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDV-----RHLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 334566666555544556777888887777654332222222 233466777777653 266666665542
Q ss_pred ---CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+..+++-+....+.|. ..+.++++++.+.
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 138 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDI 138 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 4454443332222222 4577777666553
No 295
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=48.71 E-value=82 Score=28.00 Aligned_cols=97 Identities=8% Similarity=0.068 Sum_probs=49.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH---c-CCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---A-DATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~-G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++..-.-.......+. . |.++..+..|- -|.+.+++++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDV-----ATPEGVDAVVESVR 80 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 344567776655544566777788887777643221111122111 1 66677776653 266666665542
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+....+.+ ...+.+++++..+
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWE 114 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455554333222222 2346666665544
No 296
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=48.66 E-value=79 Score=27.86 Aligned_cols=97 Identities=12% Similarity=0.061 Sum_probs=51.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
...++||.|+...=..+.+.|.+.|-.|++..-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDV-----ADRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 34567776655544566777888887776643221111112 222366677776653 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.++++++.++
T Consensus 82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (247)
T 2jah_A 82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDT 114 (247)
T ss_dssp HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 445554333322223 23566677666553
No 297
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=48.32 E-value=23 Score=31.01 Aligned_cols=94 Identities=6% Similarity=-0.003 Sum_probs=51.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---CCcEEE
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE---KSRLLI 233 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---~~~~i~ 233 (471)
.++||.|+...=..+.+.|.+.|..|++..-.-..........+.++..+..|. -|.+.+++.+.. ....+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~l- 76 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPSTV- 76 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSEE-
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCEE-
Confidence 366766665555566777888887777655432233344444455555555543 266777766643 23344
Q ss_pred EcCC-CCCccc--CCCHHHHHHHHHH
Q 012095 234 LCSP-SNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 234 i~~p-~NPtG~--~~~~~~l~~i~~l 256 (471)
+++. ..+.+. ..+.++++++.+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHH
Confidence 4443 222232 4577777766654
No 298
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=48.25 E-value=53 Score=29.70 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=50.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~ 230 (471)
.++||.|+...=..+.+.|.+.|-.|++.+-.-.......+..+.++..+..|- -|.+.+++.+.. +..
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDV-----TDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 445554444433556677788898777654332233344555566666666543 266666665532 445
Q ss_pred EEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 012095 231 LLILCSPS--NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 231 ~i~i~~p~--NPtG--~~~~~~~l~~i~~l 256 (471)
++ ++|.. .+.+ ...+.++++++.++
T Consensus 105 ~l-VnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 105 VL-FNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp EE-EECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred EE-EECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 44 44432 2222 24577777776654
No 299
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=48.12 E-value=49 Score=29.86 Aligned_cols=98 Identities=9% Similarity=0.098 Sum_probs=52.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC--------CC--Ch---H---HHHHHcCCEEEEecCCCCCCCcCC
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------WV--SY---P---EMARIADATPVILPTRISENFLLD 217 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~--------y~--~~---~---~~~~~~G~~~~~v~~~~~~~~~ld 217 (471)
....++||.|+...=..+.+.|.+.|..|++.+-. +. .- . ......+.++..+..|. -|
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~ 84 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDT-----RD 84 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CC
Confidence 33456666665554466677788889877764321 10 11 1 12334567777777653 26
Q ss_pred HHHHHhhhcc------CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 218 PKVLESKLTE------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 218 ~e~l~~~l~~------~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
.+.+++.+.+ +..+++-+....+.+. ..+.++++++.++
T Consensus 85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 131 (277)
T 3tsc_A 85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131 (277)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 6777666542 3454443332222222 4577777766654
No 300
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=48.11 E-value=98 Score=27.43 Aligned_cols=96 Identities=13% Similarity=-0.010 Sum_probs=50.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---- 226 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-...... ++..|.++..+..|- -|.+.+++.+.
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDL-----SSRSERQELMNTVAN 82 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 445677776655544566777888887776643221111111 223466777777653 26666666553
Q ss_pred ---cCCcEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 012095 227 ---EKSRLLILCSPS-NPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 227 ---~~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~ 255 (471)
.+..++ +++.. .+.+ ...+.++++++.+
T Consensus 83 ~~~g~id~l-v~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 83 HFHGKLNIL-VNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp HTTTCCCEE-EECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCCEE-EECCCCCCCCChhhCCHHHHHHHHH
Confidence 234444 44432 2222 2356666766554
No 301
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=47.76 E-value=66 Score=29.84 Aligned_cols=95 Identities=9% Similarity=0.049 Sum_probs=52.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC----------CCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHH
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF----------WVSYP---EMARIADATPVILPTRISENFLLDPKVLE 222 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~----------y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~ 222 (471)
..++||.|+...=..+.+.|.+.|..|++.+-. -.... ..+...|.++..+..|. -|.+.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~ 102 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNV-----ADWDQAA 102 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCT-----TSHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHH
Confidence 445565555444455667788889887765422 11122 23345577888887653 2666666
Q ss_pred hhhcc------CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 223 SKLTE------KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 223 ~~l~~------~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+.+.. +..+ +|+|. ....+ ...+.++++++.++
T Consensus 103 ~~~~~~~~~~g~iD~-lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 103 GLIQTAVETFGGLDV-LVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 65542 3444 44444 22222 24577777776654
No 302
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=47.60 E-value=1.5e+02 Score=26.28 Aligned_cols=97 Identities=8% Similarity=0.029 Sum_probs=54.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC---hH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS---YP---EMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~---~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+...++||.|+...=..+.+.|.+.|..|++..-.-.. .. ..++..|.++..+..|-. |.+.+++.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 84 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAKLFDF 84 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHH
Confidence 44556676666555566777888899887764221111 11 122334778888877642 66666665542
Q ss_pred ------CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 ------KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ------~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|.. .+.+ ...+.++++++.++
T Consensus 85 ~~~~~g~iD-~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 85 AEKEFGKVD-IAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHHCSEE-EEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCC-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 333 4454442 2222 24577777776654
No 303
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=47.20 E-value=39 Score=29.87 Aligned_cols=75 Identities=11% Similarity=0.085 Sum_probs=42.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCcE
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRL 231 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~~ 231 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..|. -|.+.+++.+.+ +..+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHhcCCCCE
Confidence 445666666555544556677888888777655433233334444444555555442 266777776653 3444
Q ss_pred EE
Q 012095 232 LI 233 (471)
Q Consensus 232 i~ 233 (471)
++
T Consensus 88 li 89 (249)
T 3f9i_A 88 LV 89 (249)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 304
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=47.19 E-value=1.1e+02 Score=27.53 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=51.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---- 226 (471)
+...++||.|+...=..+.+.|.+.|..|++.+-.-...... +...|.++..+..|-. |.+.+++.+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS-----EAGAGTDLIERAEA 106 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT-----STTHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHHH
Confidence 445566666655544666777888898777654433333332 3345777777776542 3333333332
Q ss_pred -cCCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 -EKSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 -~~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+...++.+....+.+ ...+.+++++..++
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAV 139 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 1344444333222222 23577777766543
No 305
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=46.95 E-value=79 Score=27.83 Aligned_cols=98 Identities=8% Similarity=0.063 Sum_probs=52.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+....++||.|+...=..+.+.|.+.|-.|++.+-.-...... ++..+.++..+..|. -|.+.+++.+..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDV-----SDPESAKAMADRTL 81 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHH
Confidence 3445566666655544566777888887777654332222222 233477787777653 266666665532
Q ss_pred ----CCcEEEEcCCCC----Ccc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSN----PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~N----PtG--~~~~~~~l~~i~~l 256 (471)
+...++ ++..- +.+ ...+.+++++..++
T Consensus 82 ~~~g~id~li-~~Ag~~~~~~~~~~~~~~~~~~~~~~~~ 119 (253)
T 3qiv_A 82 AEFGGIDYLV-NNAAIFGGMKLDFLLTIDPEYYKKFMSV 119 (253)
T ss_dssp HHHSCCCEEE-ECCCCCCGGGGGCTTTSCHHHHHHHHHH
T ss_pred HHcCCCCEEE-ECCCcCCCCCCcccccCCHHHHHHHHhh
Confidence 455444 33321 111 23566666665543
No 306
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=46.78 E-value=53 Score=29.50 Aligned_cols=102 Identities=8% Similarity=0.004 Sum_probs=55.3
Q ss_pred CCCCCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh
Q 012095 150 GLSYTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS----YPEMARIADATPVILPTRISENFLLDPKVLESKL 225 (471)
Q Consensus 150 g~~~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l 225 (471)
.+++....++||.|+...=..+.+.|++.|-.|++..-.-.. .....+..|.++..+..|. -|.+.+++.+
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~ 98 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDA-----ASESDFIEAI 98 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHH
Confidence 344555567777666555466677788888777654322111 1123345577777777653 2566666555
Q ss_pred cc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 226 TE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 226 ~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+ +...++.+....+.+ ...+.+++++..+.
T Consensus 99 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 137 (271)
T 4iin_A 99 QTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDN 137 (271)
T ss_dssp HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHh
Confidence 32 445444333322222 24566777666553
No 307
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=46.43 E-value=1e+02 Score=27.45 Aligned_cols=97 Identities=6% Similarity=0.103 Sum_probs=52.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++. ...-..... .++..|.++..+..|- -|.+.+++.+..
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADL-----TNAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCC-----CCHHHHHHHHHHHH
Confidence 34456666665554456677788889877765 433222222 2233466666666653 266666665542
Q ss_pred ----CCcEEEEcCCC-C-Ccc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPS-N-PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~-N-PtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|.. . +.+ ...+.+++++..++
T Consensus 82 ~~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 82 DKFGEIH-GLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHCSEE-EEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCC-EEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 333 3444432 2 222 24577777766654
No 308
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=46.26 E-value=45 Score=30.00 Aligned_cols=97 Identities=7% Similarity=0.061 Sum_probs=52.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCCh---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++.. ..-... ...++..|.++..+..|- -|.+.+++.+..
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADI-----RQVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 334555655554444556777888898877632 111111 122344577787777653 266666665542
Q ss_pred ----CCcEEEEcCC-CCCccc--CCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p-~NPtG~--~~~~~~l~~i~~l 256 (471)
+..+ +++|. ..+.+. ..+.+++++..++
T Consensus 92 ~~~g~id~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDI-AVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCE-EECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444 44443 222232 3577777776654
No 309
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=46.10 E-value=68 Score=28.53 Aligned_cols=97 Identities=10% Similarity=0.016 Sum_probs=47.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-............++..+..|- -|.+.+++++..
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDV-----TKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCT-----TCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeC-----CCHHHHHHHHHHHHHHcC
Confidence 334566665555444566777788887777643221112222222222334444432 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+....+.+ ...+.+++++..+
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 86 GFDLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 455444333222222 2356666766554
No 310
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=46.07 E-value=61 Score=29.08 Aligned_cols=93 Identities=15% Similarity=0.136 Sum_probs=53.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~ 230 (471)
.++||.|++..=..+.+.|.+.|-.|++.+-.-....+ +...+.++..+..|- -|.+++++.+.. +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~-~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD-FAKERPNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHTTCTTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCEEEEEecC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 46676666665566777888899888775532111112 223345666666653 256666665532 333
Q ss_pred EEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 231 LLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 231 ~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
++++|. .++.+ ..++.++++++.++
T Consensus 78 -iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 -VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp -EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred -EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455554 33333 35677888887765
No 311
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=46.01 E-value=98 Score=27.95 Aligned_cols=98 Identities=9% Similarity=0.155 Sum_probs=52.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-hHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-.. ...... ..+.++..+..|- -|.+.+++++..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADM-----TKPSEIADMMAMV 98 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCC-----CCHHHHHHHHHHH
Confidence 34456777666555566677788889887765432111 112221 1256777777653 266666665532
Q ss_pred -----CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 -----KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 -----~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+. ..+.++++++.++
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 134 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAV 134 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4454443333222222 3477777766654
No 312
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=46.00 E-value=1.5e+02 Score=25.85 Aligned_cols=95 Identities=11% Similarity=0.113 Sum_probs=50.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-CCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-WVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|-.|++..-. -...... ++..+.++..+..|. -|.+.+++.+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADL-----ATSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 456666555444455667777888777664433 2233322 223366777777653 266777766542
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+... .+.+ ...+.++++++.+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 45555543322 2222 1345555655544
No 313
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=45.78 E-value=49 Score=30.00 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=52.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-----------CC--ChH------HHHHHcCCEEEEecCCCCCCC
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-----------WV--SYP------EMARIADATPVILPTRISENF 214 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-----------y~--~~~------~~~~~~G~~~~~v~~~~~~~~ 214 (471)
....++||.|+...=..+.+.|.+.|..|++.+-. +. .-. ......|.++..+..|-
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv---- 85 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDV---- 85 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCT----
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCC----
Confidence 44556666666554466777788889877764322 11 011 12233466777777653
Q ss_pred cCCHHHHHhhhcc------CCcEEEEcCC-CCCccc---CCCHHHHHHHHHH
Q 012095 215 LLDPKVLESKLTE------KSRLLILCSP-SNPTGS---VYPKNLLDEIARI 256 (471)
Q Consensus 215 ~ld~e~l~~~l~~------~~~~i~i~~p-~NPtG~---~~~~~~l~~i~~l 256 (471)
-|.+.+++.+.. +..++ ++|. ..+.+. ..+.++++++.++
T Consensus 86 -~~~~~v~~~~~~~~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (286)
T 3uve_A 86 -RDYDALKAAVDSGVEQLGRLDII-VANAGIGNGGDTLDKTSEEDWTEMIDI 135 (286)
T ss_dssp -TCHHHHHHHHHHHHHHHSCCCEE-EECCCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHhCCCCEE-EECCcccCCCCccccCCHHHHHHHHHH
Confidence 266666665532 34444 4443 222222 3577777766653
No 314
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=45.58 E-value=83 Score=28.31 Aligned_cols=98 Identities=12% Similarity=0.038 Sum_probs=50.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++..-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDV-----RSVPEIEALVAAVVE 95 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 334566666555444556677778887776643221111111 222366676676653 266666665542
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 129 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVET 129 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 445444333222222 23566666665543
No 315
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=45.56 E-value=1.1e+02 Score=26.61 Aligned_cols=97 Identities=8% Similarity=0.022 Sum_probs=49.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|++.|-.|++.+-.-..... .++..+.++..+..|. -|.+.+++.+..
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDI-----TSEQELSALADFAIS 84 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCC-----CCHHHHHHHHHHHHH
Confidence 34456666554444455677788888777764432111111 1223466666666543 266777666542
Q ss_pred ---CCcEEEEcCCCC-CcccCCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSN-PTGSVYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~N-PtG~~~~~~~l~~i~~ 255 (471)
+..+++.+.... +.....+.+++++..+
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~ 116 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYE 116 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 455555443322 2112356666555443
No 316
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=45.14 E-value=16 Score=37.11 Aligned_cols=116 Identities=14% Similarity=0.218 Sum_probs=70.4
Q ss_pred hCCCCCCCcEEEeCChHHHHHHHHHHhc---CC----------CC------eEEEcCCCCCC------------------
Q 012095 149 NGLSYTPDQILVSNGAKQSILQAVLAVC---SP----------GD------EVIIPAPFWVS------------------ 191 (471)
Q Consensus 149 ~g~~~~~~~i~it~G~~~al~~~~~~l~---~~----------gd------~Vlv~~p~y~~------------------ 191 (471)
|.+.+ ++.|.|+.++..++...+++|. .. |. ..+.+.|-|.-
T Consensus 80 Y~L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik 158 (543)
T 3rcn_A 80 YRLEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVL 158 (543)
T ss_dssp EEEEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHH
T ss_pred eEEEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHH
Confidence 34456 7789998877776665555542 21 21 13456676651
Q ss_pred -hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccC---CcEEE--E-cC--CCCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 192 -YPEMARIADATPVILPTRISENFLLDPKVLESKLTEK---SRLLI--L-CS--PSNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 192 -~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~---~~~i~--i-~~--p~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
+.+.+..+..++...-+..+.+|.+..+.+-++-... ..-.+ . +. -..|.|-.++.+++++|++.|+++ +
T Consensus 159 ~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~r-g 237 (543)
T 3rcn_A 159 RFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADR-H 237 (543)
T ss_dssp HHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHc-C
Confidence 3345566778877777766666776655544432110 00000 0 00 123557899999999999999999 8
Q ss_pred eEEE
Q 012095 263 LLVL 266 (471)
Q Consensus 263 ~~ii 266 (471)
+-||
T Consensus 238 I~VI 241 (543)
T 3rcn_A 238 ITVI 241 (543)
T ss_dssp CEEE
T ss_pred CEEe
Confidence 8888
No 317
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=44.95 E-value=77 Score=27.81 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=48.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEE-EEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATP-VILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~-~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
+...++||.|+...-..+.+.|.+.|..|++..-.-.......+..+.++ ..+..|. -|.+.+++++..
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV-----TDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCT-----TCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEec-----CCHHHHHHHHHHHHhhC
Confidence 44466776555544456677777888777765432111222333334444 5555442 266777666532
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+....+.+ ...+.+++++..+
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMA 114 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHH
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 445554333322222 2345565555443
No 318
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=44.80 E-value=1e+02 Score=27.12 Aligned_cols=97 Identities=13% Similarity=0.123 Sum_probs=49.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|++.|..|++.+-.-..... .++..+.++..+..|. -|.+.+++++..
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDV-----TNTESVQNAVRSVHE 86 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHH
Confidence 34456776555544455677777888777765432111111 2223466676676653 266777666542
Q ss_pred ---CCcEEEEcCCCCC-cc--cCCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNP-TG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~NP-tG--~~~~~~~l~~i~~ 255 (471)
+...++.+....+ .+ ...+.+++++..+
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 120 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVD 120 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4555554433222 22 2345555555443
No 319
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=44.77 E-value=74 Score=28.34 Aligned_cols=98 Identities=17% Similarity=0.130 Sum_probs=48.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
+...++||.|+...=..+.+.|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDV-----TQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecC-----CCHHHHHHHHHHHHHHcC
Confidence 334566665555444556677778887777643221112222233332344555442 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+......+ ...+.+++++..++
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILDV 111 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554333322222 23466666655543
No 320
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.50 E-value=80 Score=28.51 Aligned_cols=96 Identities=11% Similarity=0.023 Sum_probs=51.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
..++||.|+...=..+.+.|.+.|-.|++..-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV-----TSTDEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHHHHc
Confidence 3566666555544566777888898777654322112222 233466777777653 266666665532
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 131 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLDT 131 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344444333222222 23577777766554
No 321
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=44.31 E-value=1.8e+02 Score=26.14 Aligned_cols=163 Identities=12% Similarity=0.123 Sum_probs=94.3
Q ss_pred HHHHHHHhcCCCeEEcCCCCCCCCC-hHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCC
Q 012095 85 DQATALAQAGVSVIRLAAGEPDFDT-PVLIAEAGINAIREGFTRYTPNAGTLELRSAICHKLKEENGLSYTPDQILVSNG 163 (471)
Q Consensus 85 ~~~~~~~~~g~~~i~l~~g~~~~~~-p~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G 163 (471)
+....+.+.|-++|-|+.=..+.-. -|.+.+|..+++.++.+ ...+-+.+.+. .. . --+++..=
T Consensus 32 ~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~-------~~~~~~~~~~~----r~---~-~Pivlm~Y 96 (252)
T 3tha_A 32 AFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVD-------IHSVFELLARI----KT---K-KALVFMVY 96 (252)
T ss_dssp HHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCC-------HHHHHHHHHHC----CC---S-SEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCC-------HHHHHHHHHHH----hc---C-CCEEEEec
Confidence 3445566788899887765543222 36788888888876432 13333333332 11 1 12333221
Q ss_pred h----HHHHHHHHHHhcCCC-CeEEEcCCCCC---ChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc
Q 012095 164 A----KQSILQAVLAVCSPG-DEVIIPAPFWV---SYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 164 ~----~~al~~~~~~l~~~g-d~Vlv~~p~y~---~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
. .-++...+..+.+-| |.+++++--+. .+...++..|...+.+-.. . -+.+.+++........||+.
T Consensus 97 ~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP--~---t~~eRi~~ia~~a~gFiY~V 171 (252)
T 3tha_A 97 YNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSV--T---TPKERVKKLVKHAKGFIYLL 171 (252)
T ss_dssp HHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEET--T---SCHHHHHHHHTTCCSCEEEE
T ss_pred cCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC--C---CcHHHHHHHHHhCCCeEEEE
Confidence 1 123444555555667 89999885443 3456788899987664322 1 14677777666555677766
Q ss_pred CCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEE
Q 012095 236 SPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 236 ~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~ 267 (471)
+-.--||..-. .+.+.++++.++++.++.+++
T Consensus 172 s~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 172 ASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp CCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred ecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 54446886533 234677777777764666665
No 322
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=43.77 E-value=1.2e+02 Score=27.18 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=54.2
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCCh---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
+....++||.|+...=..+.+.|.+.|-.|++. ...-... ...++..|.++..+..|. -|.+.+++.+.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN-----RDAEAIEQAIRET 103 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHH
Confidence 444566776666554466677788889877664 2211111 122344577777777653 266766665542
Q ss_pred -----CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 228 -----KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -----~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+..++ +++. ....+ ...+.++++++.++
T Consensus 104 ~~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 104 VEALGGLDIL-VNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHHSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 34444 4443 22222 24577777776654
No 323
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=43.55 E-value=33 Score=36.96 Aligned_cols=114 Identities=10% Similarity=0.065 Sum_probs=67.8
Q ss_pred CCCCCCcEEEeCChHHHHHHHHHHh---cCCCC------eEEEcCCCCC-------------------ChHHHHHHcCCE
Q 012095 151 LSYTPDQILVSNGAKQSILQAVLAV---CSPGD------EVIIPAPFWV-------------------SYPEMARIADAT 202 (471)
Q Consensus 151 ~~~~~~~i~it~G~~~al~~~~~~l---~~~gd------~Vlv~~p~y~-------------------~~~~~~~~~G~~ 202 (471)
+.++.+.|.|+.++..++...+++| +..++ ..+.+.|.|. .+.+.+..++.+
T Consensus 264 L~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN 343 (858)
T 1c7s_A 264 LKIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLN 343 (858)
T ss_dssp EEECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 3456678888877776665555554 33332 2345567665 123445667777
Q ss_pred EEEecCCCCCCCcCCHHHHHhhhccCC---------cEEEEcCC-C--CCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 203 PVILPTRISENFLLDPKVLESKLTEKS---------RLLILCSP-S--NPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 203 ~~~v~~~~~~~~~ld~e~l~~~l~~~~---------~~i~i~~p-~--NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
...+.+..+.+|.+..+.+.++-.... ..+ .+.. + .+.|-.++.+++++|++.|+++ ++-||
T Consensus 344 ~lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~-~p~~g~~~~~~~g~YT~~direIv~YA~~r-gI~VI 417 (858)
T 1c7s_A 344 KFHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCL-LPQYGQGPDVYGGFFSRQDYIDIIKYAQAR-QIEVI 417 (858)
T ss_dssp EEEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSB-CCCTTCCSSCEECCBCHHHHHHHHHHHHTT-TCEEE
T ss_pred EEEEEeccCccccccccCCchhhhccccccccccccccc-cccccCCCCccCCCCCHHHHHHHHHHHHHc-CCEEE
Confidence 776666655667666554433221000 001 0000 1 1456789999999999999999 88877
No 324
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=43.47 E-value=61 Score=29.39 Aligned_cols=68 Identities=13% Similarity=0.025 Sum_probs=41.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
+...++||.|+...=..+.+.|.+.|-.|++.+-.-..........+.++..+..|- -|.+.+++.+.
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 71 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDV-----RSLQDQKRAAE 71 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCC-----CCHHHHHHHHH
Confidence 344567776665555666777888898877765433333444555667777777653 25666665543
No 325
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=43.43 E-value=92 Score=27.34 Aligned_cols=96 Identities=7% Similarity=0.105 Sum_probs=49.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|..|++..- .-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADV-----ANAEDVTNMVKQTVDV 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 34666655544445566777788877766432 21111111 223466676776653 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINT 112 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455544333222222 23566777666553
No 326
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=43.27 E-value=99 Score=26.90 Aligned_cols=97 Identities=12% Similarity=0.047 Sum_probs=49.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
....++||.|+...-..+.+.|++.|..|++..-.-.......+. .+.++..+..|. -|.+.+++++.+
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNL-----LSEESINKAFEEIY 80 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccC-----CCHHHHHHHHHHHH
Confidence 334566665554444556667778887777654321111111111 366666666543 266777666542
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+...++.+....+.+ ...+.+++++..+
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 455555433322222 2345566655544
No 327
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=43.22 E-value=80 Score=27.94 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=48.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
.++||.|+...=..+.+.|.+.|..|++..-.-...... ++..|.++..+..|- -|.+.+++++..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDV-----SDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHhC
Confidence 356665554444556677778887777643221111111 223366666676653 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.++++++.++
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 109 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNI 109 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 445444333222222 23566666665543
No 328
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=43.14 E-value=70 Score=30.49 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=44.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhh-ccCCcEE
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKL-TEKSRLL 232 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l-~~~~~~i 232 (471)
..|+..+++..+...+..+- ..| -.|++|.-.-..-...++.+|++++.++-+ |. +..+..+.+ .+.+...
T Consensus 94 ~~vv~aSsGN~g~alA~aa~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~----~~-~a~~~a~~l~~~~~~~~ 167 (364)
T 4h27_A 94 AHFVCSSSGNAGMAAAYAAR-QLGVPATIVVPGTTPALTIERLKNEGATVKVVGEL----LD-EAFELAKALAKNNPGWV 167 (364)
T ss_dssp CEEEECCSSHHHHHHHHHHH-HHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSS----TT-HHHHHHHHHHHHSTTEE
T ss_pred CEEEEeCCChHHHHHHHHHH-HhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCC----HH-HHHHHHHHHHHhCCCeE
Confidence 46676677777776554432 223 345666543333446778899999988632 21 222222223 3334666
Q ss_pred EEcCCCCCc
Q 012095 233 ILCSPSNPT 241 (471)
Q Consensus 233 ~i~~p~NPt 241 (471)
+++..+||.
T Consensus 168 ~~~~~~np~ 176 (364)
T 4h27_A 168 YIPPFDDPL 176 (364)
T ss_dssp EECSSCSHH
T ss_pred EeCCCCCHH
Confidence 665445653
No 329
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=43.09 E-value=95 Score=27.52 Aligned_cols=97 Identities=11% Similarity=0.108 Sum_probs=51.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
..++||.|+...=..+.+.|.+.|..|++.+-.-........ ..+.++..+..|- -|.+.+++.+..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDV-----RNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHHc
Confidence 455565555444455677788889877765432222222222 2355677776653 256666665532
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARIV 257 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l~ 257 (471)
+...++-+....+.+ ...+.+++++..++-
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n 114 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIV 114 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHH
Confidence 344444332222222 346777777776653
No 330
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=42.94 E-value=94 Score=27.15 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=46.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcC--CEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIAD--ATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
..++||.|+...=..+.+.|++.|..|++..-.-.......+... .++..+..|. -|.+.+++.+..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS-----SDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCC-----CCHHHHHHHHHHHHHHhC
Confidence 456666554444455667777788777664322111122222222 2445555442 256666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+...++.+....+.+ ...+.+++++..+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLA 111 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 455555443322222 2356666665554
No 331
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=42.54 E-value=1.9e+02 Score=25.87 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=52.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC---------CChH------HHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW---------VSYP------EMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y---------~~~~------~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.- .... ...+..|.++..+..|- -|.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~ 83 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV-----KDR 83 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCC-----CCH
Confidence 334566666655544566777888897777644321 0111 22344577777777653 266
Q ss_pred HHHHhhhcc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 219 KVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 219 e~l~~~l~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+.+++.+.. +..+++-+....+.+ ...+.+++++..++
T Consensus 84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (281)
T 3s55_A 84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT 129 (281)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 666665542 445444333222222 34577777766553
No 332
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=42.52 E-value=60 Score=29.30 Aligned_cols=98 Identities=8% Similarity=0.104 Sum_probs=52.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC--------CC--Ch------HHHHHHcCCEEEEecCCCCCCCcCC
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF--------WV--SY------PEMARIADATPVILPTRISENFLLD 217 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~--------y~--~~------~~~~~~~G~~~~~v~~~~~~~~~ld 217 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-. |. .- ...++..|.++..+..|- -|
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~ 88 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-----RD 88 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-----TC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-----CC
Confidence 34456666665554456677788889877764321 11 11 112334566777777653 26
Q ss_pred HHHHHhhhcc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 218 PKVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 218 ~e~l~~~l~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+.+++.+.. +..+++-+......+ ...+.++++++.++
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhh
Confidence 6666665542 445444333222222 23577777766554
No 333
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=42.33 E-value=1e+02 Score=27.38 Aligned_cols=96 Identities=10% Similarity=0.124 Sum_probs=49.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---Hc--CCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA--DATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-.......+ .. |.++..+..|- -|.+.+++.+..
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~ 86 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-----SDEAQVEAYVTAT 86 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-----TSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccC-----CCHHHHHHHHHHH
Confidence 33456666555554456677788888777664322111111211 11 66677776653 266666665542
Q ss_pred -----CCcEEEEcCCC-CCc-c--cCCCHHHHHHHHH
Q 012095 228 -----KSRLLILCSPS-NPT-G--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 -----~~~~i~i~~p~-NPt-G--~~~~~~~l~~i~~ 255 (471)
+..++ +++.. .+. + ...+.++++++.+
T Consensus 87 ~~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 122 (267)
T 1iy8_A 87 TERFGRIDGF-FNNAGIEGKQNPTESFTAAEFDKVVS 122 (267)
T ss_dssp HHHHSCCSEE-EECCCCCCCCBCGGGSCHHHHHHHHH
T ss_pred HHHcCCCCEE-EECCCcCCCCCCcccCCHHHHHHHHH
Confidence 34544 44432 211 2 2346666766554
No 334
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=42.22 E-value=1.2e+02 Score=26.83 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=47.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHc-----CCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA-----DATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-.......+.. +.++..+..|- -|.+.+++.+..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI-----REPGDIDRLFEKA 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccC-----CCHHHHHHHHHHH
Confidence 3345666655554445666777788877776432211111222211 33566666543 266666665541
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
....++-+....+.+ ...+.+++++..+
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYR 114 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 245444333222222 2346666655544
No 335
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=42.00 E-value=1.3e+02 Score=26.93 Aligned_cols=97 Identities=13% Similarity=0.018 Sum_probs=50.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---- 226 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-...... ++..|.++..+..|. -|.+.+++++.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDL-----LSRTERDKLMQTVAH 94 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCC-----CCHHHHHHHHHHHHH
Confidence 444567766655544566777888887776643221111121 223366676676653 25666665553
Q ss_pred ---cCCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 227 ---EKSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 ---~~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
.+..++ +++.. .+.+ ...+.++++++.++
T Consensus 95 ~~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 129 (273)
T 1ae1_A 95 VFDGKLNIL-VNNAGVVIHKEAKDFTEKDYNIIMGT 129 (273)
T ss_dssp HTTSCCCEE-EECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCcEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 234444 44432 2222 23566777665543
No 336
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=41.51 E-value=89 Score=27.85 Aligned_cols=98 Identities=9% Similarity=0.068 Sum_probs=53.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++.+-.-..... .+...|.++..+..|-. |.+.+++.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 44456676666554456677788889777765433222222 22345677777776532 66666665532
Q ss_pred ---CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+... .+.+ ...+.+++++..++
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 34544433322 1222 24566777766654
No 337
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=41.46 E-value=68 Score=28.72 Aligned_cols=97 Identities=15% Similarity=0.149 Sum_probs=48.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...++||.|+...=..+.+.|.+.|-.|++..-.-.......+..+.++..+..|- -|.+.+++.+.. +
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADV-----SDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCT-----TSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHHcCC
Confidence 34566665555544566777778887777654321122233333444556666543 256666665532 3
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
..+++-+....+.+ ...+.++++++.++
T Consensus 81 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 110 (263)
T 2a4k_A 81 LHGVAHFAGVAHSALSWNLPLEAWEKVLRV 110 (263)
T ss_dssp CCEEEEGGGGTTTTC----CHHHHHHHHHH
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 45444332222222 23456666665553
No 338
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=41.39 E-value=1.2e+02 Score=27.41 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=53.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCCh----HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSY----PEMARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~----~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++..-.-... ....+..|.++..+..|- -|.+.+++.+.+
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDL-----SDEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHHHHH
Confidence 344566666655544566777888897776644322111 122344577777777653 266666665532
Q ss_pred ----CCcEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPS--NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~--NPtG--~~~~~~~l~~i~~l 256 (471)
+...+ |+|.. .+.+ ...+.++++++.++
T Consensus 121 ~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 121 RQLGSLNIL-VNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHSSCCEE-EECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEE-EECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 34444 44432 2222 23477777776664
No 339
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=41.33 E-value=1.1e+02 Score=28.27 Aligned_cols=98 Identities=9% Similarity=0.120 Sum_probs=52.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCC-------CC--Ch------HHHHHHcCCEEEEecCCCCCCCcCCH
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPF-------WV--SY------PEMARIADATPVILPTRISENFLLDP 218 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~-------y~--~~------~~~~~~~G~~~~~v~~~~~~~~~ld~ 218 (471)
+...++||.|+...-..+.+.|.+.|..|++.+-. +. .- ...+...|.++..+..|- -|.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV-----RDL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT-----TCH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCC-----CCH
Confidence 33455666555554456677788889877764321 11 11 112334577777777653 266
Q ss_pred HHHHhhhcc------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 219 KVLESKLTE------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 219 e~l~~~l~~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+.+++.+.. +..+++-+....+.+ ...+.++++++.++
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~v 165 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 666665542 445444333222222 24577777766654
No 340
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=40.28 E-value=80 Score=32.24 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=58.2
Q ss_pred cEEEeCChHHHHHHHHHHhcC---C---CC-------eEEEcCCCCCC-------------------hHHHHHHcCCEEE
Q 012095 157 QILVSNGAKQSILQAVLAVCS---P---GD-------EVIIPAPFWVS-------------------YPEMARIADATPV 204 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~---~---gd-------~Vlv~~p~y~~-------------------~~~~~~~~G~~~~ 204 (471)
.|.++.++..++...+++|.+ . +. ..+.+.|.|+- +.+.+..++.++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 477887777666656666532 1 11 23455666541 2334445566665
Q ss_pred EecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 205 ILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 205 ~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
...+..+.+|.+..+...++-.... ...|..++.+++++|++.|+++ ++-||
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~Ga---------~~~~~~YT~~di~eiv~yA~~r-gI~VI 273 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFGA---------LSPQKVYTKAAIREVVRFGLER-GVRVL 273 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHHS---------SSSSSCBCHHHHHHHHHHHHHT-TCEEE
T ss_pred EEEeecCcCceeccccCcchhccCC---------cCCCCCcCHHHHHHHHHHHHHh-CCcee
Confidence 5555544555554443332211000 1135689999999999999999 88777
No 341
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=40.20 E-value=1.3e+02 Score=26.80 Aligned_cols=99 Identities=12% Similarity=0.013 Sum_probs=51.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---Hc--CCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IA--DATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~--G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
++...++||.|+...=..+.+.|.+.|-.|++.+-.-.......+ .. +..+..+..|. -|.+.+++.+.+
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 82 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADL-----GTEQGCQDVIEK 82 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCC-----CCHHHHHHHHHh
Confidence 344456666655544455677788889777765433222222222 12 45666666543 256667666643
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+......+ ...+.++++++.++
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 115 (267)
T 3t4x_A 83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEV 115 (267)
T ss_dssp CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 345444333222212 24566676665543
No 342
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=40.08 E-value=2e+02 Score=25.63 Aligned_cols=98 Identities=7% Similarity=-0.004 Sum_probs=52.0
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc---
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT--- 226 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--- 226 (471)
++...++||.|+...=..+.+.|.+.|..|++.+-. ...... +...|.++..+..|.. |.+.+++...
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLA-----DLEGAANVAEELA 102 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 344566676665554456677788889887765522 222222 2334677777776542 5555554422
Q ss_pred --cCCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 --EKSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 --~~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+..+++-+....+.+ ...+.+++++..++
T Consensus 103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (273)
T 3uf0_A 103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTV 136 (273)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 1445444332222222 23577777766653
No 343
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=39.97 E-value=96 Score=27.67 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=53.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCcEEE
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE--KSRLLI 233 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~~i~ 233 (471)
..+++|.|++..=..+.+.|.+.|-.|++.+-.-.. .....+.++..+..|- -|.+++++.+.+ +.. ++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~---~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~g~iD-iL 82 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG---VHAPRHPRIRREELDI-----TDSQRLQRLFEALPRLD-VL 82 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS---TTSCCCTTEEEEECCT-----TCHHHHHHHHHHCSCCS-EE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HhhhhcCCeEEEEecC-----CCHHHHHHHHHhcCCCC-EE
Confidence 455666555554466677788899877765432211 1123445566666543 266777776654 333 45
Q ss_pred EcCC-CCCcccCCCHHHHHHHHHH
Q 012095 234 LCSP-SNPTGSVYPKNLLDEIARI 256 (471)
Q Consensus 234 i~~p-~NPtG~~~~~~~l~~i~~l 256 (471)
+||- -+.....++.++|+++.++
T Consensus 83 VNNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 83 VNNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp EECCCCCCGGGGGSHHHHHHHHHH
T ss_pred EECCCCCCCcccCCHHHHHHHHHH
Confidence 5554 2333456777888877765
No 344
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=39.87 E-value=2.7e+02 Score=26.94 Aligned_cols=66 Identities=9% Similarity=0.035 Sum_probs=35.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCCCCCC---------------hHHHHHHcCCEEEEecCCCCCCCcCCHH
Q 012095 156 DQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVS---------------YPEMARIADATPVILPTRISENFLLDPK 219 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~---------------~~~~~~~~G~~~~~v~~~~~~~~~ld~e 219 (471)
..++||.|++..=..+...|.. .|-.|++..-.-.. ....++..|.++..+..|- -|.+
T Consensus 48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv-----td~~ 122 (405)
T 3zu3_A 48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA-----FSDE 122 (405)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT-----TSHH
T ss_pred CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC-----CCHH
Confidence 3455555444433445566777 78776653211111 1224456788887787653 2666
Q ss_pred HHHhhhc
Q 012095 220 VLESKLT 226 (471)
Q Consensus 220 ~l~~~l~ 226 (471)
.+++.+.
T Consensus 123 ~v~~~v~ 129 (405)
T 3zu3_A 123 IKQLTID 129 (405)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665553
No 345
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=39.71 E-value=99 Score=27.36 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=47.8
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC--hHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS--YPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~--~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
.++||.|+...-..+.+.|.+.|..|++..-.-.. .... ++..|.++..+..|- -|.+.+++.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV-----TDKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 45666555444455666777788777664322111 1222 222366677776653 256666665532
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSV 111 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHh
Confidence 445444333222222 13566666665543
No 346
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=39.57 E-value=91 Score=27.85 Aligned_cols=98 Identities=9% Similarity=0.072 Sum_probs=49.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH----HHcCCEEEEecCCCCCCCcCCHHHHHhhhc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA----RIADATPVILPTRISENFLLDPKVLESKLT--- 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~----~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--- 226 (471)
+...++||.|+...=..+.+.|.+.|-.|++..-.-....... ...|.++..+..|-. |.+.+++.+.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 93 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAA 93 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHH
Confidence 3345566555554445567778888877776543222222222 125777777776543 3344444332
Q ss_pred c---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 E---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 ~---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+ +..+++-+......+ ...+.+++++..++
T Consensus 94 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 128 (266)
T 4egf_A 94 EAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAV 128 (266)
T ss_dssp HHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 1 455554333222212 24567777766554
No 347
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=39.57 E-value=1.7e+02 Score=25.88 Aligned_cols=98 Identities=9% Similarity=0.083 Sum_probs=52.0
Q ss_pred CCCcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCCh-H----HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 154 TPDQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSY-P----EMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 154 ~~~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~-~----~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
....++||.|+ ...=..+.+.|.+.|..|++..-.-... . ......|.++..+.+|-. |.+.+++.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-----SYESCEKLVK 93 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-----CHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-----CHHHHHHHHH
Confidence 44566666555 3333446667778888777654333322 2 222345778888877542 6666666553
Q ss_pred c------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 E------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 ~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
. +...++.+....+.+ ...+.+++++..+.
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 131 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQV 131 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHh
Confidence 2 345444333222222 23466666666543
No 348
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=39.46 E-value=92 Score=27.86 Aligned_cols=69 Identities=7% Similarity=-0.044 Sum_probs=37.5
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
+....++||.|+...-..+.+.|.+.|..|++.+-.-...... ++..|.++..+..|. -|.+.+++++.
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~v~~~~~ 100 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDC-----SNREDIYSSAK 100 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeC-----CCHHHHHHHHH
Confidence 3445667766555444566777778887777654321111121 223366676776653 25666666553
No 349
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.27 E-value=91 Score=27.71 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=50.5
Q ss_pred CCCcEEEeCCh-HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 154 TPDQILVSNGA-KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 154 ~~~~i~it~G~-~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
+...++||.|+ ...=..+.+.|++.|..|++.+-.-.......+. .+.++..+..|-. |.+.+++.+..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHH
Confidence 34456777664 3333446667778887777654332222222222 2356667766532 56666665532
Q ss_pred -----CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+....+.+ ...+.+++++..+.
T Consensus 96 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 445444333322222 24577777766654
No 350
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=39.12 E-value=58 Score=29.86 Aligned_cols=21 Identities=10% Similarity=0.332 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEc
Q 012095 247 KNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 247 ~~~l~~i~~l~~~~~~~~ii~D 268 (471)
.+.++++++.|.++ |+.||+|
T Consensus 64 ~~~ld~~v~~a~~~-Gi~Vild 84 (302)
T 1bqc_A 64 PSDVANVISLCKQN-RLICMLE 84 (302)
T ss_dssp HHHHHHHHHHHHHT-TCEEEEE
T ss_pred HHHHHHHHHHHHHC-CCEEEEE
Confidence 57788888888888 8888887
No 351
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=39.04 E-value=98 Score=28.17 Aligned_cols=97 Identities=7% Similarity=-0.015 Sum_probs=49.4
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
+....++||.|+...=..+.+.|++.|..|++.+-.-...... ++..|.++..+..|- -|.+.+++++..
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~ 106 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV-----TDEDGIQAMVAQIE 106 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecC-----CCHHHHHHHHHHHH
Confidence 3444566666555544566777888887777643221111111 223355555666543 266666665542
Q ss_pred ----CCcEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSPS-NPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~ 255 (471)
+..++ |++.. .+.+ ...+.++++++.+
T Consensus 107 ~~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 107 SEVGIIDIL-VNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp HHTCCCCEE-EECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHcCCCcEE-EECCCcCCCCCcccCCHHHHHHHHH
Confidence 34444 44432 2222 2346666766554
No 352
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=39.00 E-value=1.4e+02 Score=26.48 Aligned_cols=99 Identities=11% Similarity=0.023 Sum_probs=51.9
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---H-cCC-EEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-ADA-TPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~-~G~-~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
+....++||.|+...=..+.+.|.+.|..|++.+-.-.......+ . .+. ++..+..|- -|.+.+++.+..
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV-----LDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 344556676666554456677788889877765432222222221 1 333 466666653 256666655432
Q ss_pred ------CCcEEEEcCCCCCccc--CCCHHHHHHHHHH
Q 012095 228 ------KSRLLILCSPSNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 ------~~~~i~i~~p~NPtG~--~~~~~~l~~i~~l 256 (471)
+...++-+....+.+. ..+.+++++..++
T Consensus 81 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 81 CERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4454443333333332 4677777776654
No 353
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=38.93 E-value=1.2e+02 Score=27.40 Aligned_cols=98 Identities=13% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-........ ..|.++..+..|- -|.+.+++.+..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADV-----SDELQMRNAVRDLVL 101 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHH
Confidence 33456666665554456677788889777765433222222222 2466777777653 266666665542
Q ss_pred ---CCcEEEEcCCCC-Ccc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~N-PtG--~~~~~~~l~~i~~l 256 (471)
+...++-+.... +.+ ...+.++++++.++
T Consensus 102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 136 (283)
T 3v8b_A 102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAV 136 (283)
T ss_dssp HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHH
Confidence 445444333222 212 24566777766654
No 354
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=38.85 E-value=77 Score=27.73 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=46.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...-..+.+.|.+.|..|++..-.-.......+. .+.++..+..|. -|.+.+++++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 78 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV-----ADEGDVNAAIAATMEQF 78 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHHHh
Confidence 456665554444556667777887776654321112222222 244566666543 266677666542
Q ss_pred -CCcEEEEcCCCCCcc-----cCCCHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG-----SVYPKNLLDEIAR 255 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG-----~~~~~~~l~~i~~ 255 (471)
+...++.+....+.+ ...+.+++++..+
T Consensus 79 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~ 112 (250)
T 2cfc_A 79 GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMA 112 (250)
T ss_dssp SCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHH
Confidence 455554433222211 1245566655544
No 355
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=38.84 E-value=1.2e+02 Score=27.39 Aligned_cols=96 Identities=14% Similarity=0.166 Sum_probs=49.4
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH----cCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI----ADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|..|++.+-.-.......+. .+.++..+..|- -|.+.+++++..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDV-----RDPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCHHHHHHHHHHHHHH
Confidence 4566666555444556777778887777654321111222221 166677776653 266666665532
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+......+ ...+.+++++..+.
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 134 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDI 134 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 345554333322222 13566666665543
No 356
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=38.08 E-value=1.2e+02 Score=26.45 Aligned_cols=67 Identities=12% Similarity=0.178 Sum_probs=37.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
...++||.|+...=..+.+.|++.|-.|++. ...-...... ++..+.++..+..|. -|.+.+++.+.
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 75 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDV-----KNPEDVENMVK 75 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCT-----TSHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCC-----CCHHHHHHHHH
Confidence 3456666555444455667777888777765 3322222222 233466777776653 26666666554
No 357
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=37.94 E-value=1.4e+02 Score=26.69 Aligned_cols=97 Identities=12% Similarity=0.098 Sum_probs=48.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH---cCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---ADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-.......+. .| ++..+..|- -|.+.+++++..
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADL-----SSEAGARRLAQALGE 101 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeC-----CCHHHHHHHHHHHHH
Confidence 334566665555444556677778887777654322112222222 23 566666543 266666665542
Q ss_pred ---CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+......+ ...+.++++++.++
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 135 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQL 135 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444332222222 23456666665543
No 358
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.93 E-value=82 Score=27.71 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=51.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CCh---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSY---PEMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|..|++..-.- ... ...++..|.++..+..|- -|.+.+++.+.+
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~ 79 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV-----ADADEVKAMIKEVVSQ 79 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccC-----CCHHHHHHHHHHHHHH
Confidence 3456665555544566777888898876633211 111 122344577777777653 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.++++++.+.
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (246)
T 3osu_A 80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDT 112 (246)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333322222 34577777766654
No 359
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=37.76 E-value=1.1e+02 Score=27.50 Aligned_cols=97 Identities=10% Similarity=0.025 Sum_probs=51.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
+...++||.|+...=..+.+.|.+.|-.|++..-.-..... .++..|.++..+.+|- -|.+.+++.+..
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~ 101 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNV-----NDATAVDALVESTLK 101 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeC-----CCHHHHHHHHHHHHH
Confidence 33455665555544455667788889877765433222222 2334466666666543 266666665542
Q ss_pred ---CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+..++ ++|. ..+.+ ...+.++++++.++
T Consensus 102 ~~g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~v 135 (270)
T 3ftp_A 102 EFGALNVL-VNNAGITQDQLAMRMKDDEWDAVIDT 135 (270)
T ss_dssp HHSCCCEE-EECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEE-EECCCCCCCCCcccCCHHHHHHHHHH
Confidence 34444 4443 22222 24577777776654
No 360
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=36.97 E-value=1.5e+02 Score=26.81 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=54.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCC-C----hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWV-S----YPEMARIADATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~-~----~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
+...++||.|+...=..+.+.|.+.|..|++..-.-. . .....+..|.++..+..|-. |.+.+++.+..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 122 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLS-----DESFARSLVHKA 122 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTT-----SHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCC-----CHHHHHHHHHHH
Confidence 3345666666655556667778888988776443211 1 11233456778887776532 56666655532
Q ss_pred -----CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 -----KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -----~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++.+... .+.+ ...+.++++++.++
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 159 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAV 159 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 44544433322 1222 24577777777664
No 361
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=36.79 E-value=1.9e+02 Score=24.91 Aligned_cols=95 Identities=18% Similarity=0.127 Sum_probs=47.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE--KSR 230 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~ 230 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-......... .+.+++..++ -|.+.+++.+.. +..
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id 78 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL-------GDWEATERALGSVGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeC-------CCHHHHHHHHHHcCCCC
Confidence 345677776655544556677778887777643221111222222 2555543322 277788887753 344
Q ss_pred EEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 231 LLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 231 ~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+++-+......+ ...+.+++++..+
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 3d3w_A 79 LLVNNAAVALLQPFLEVTKEAFDRSFE 105 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEEECCccCCCcchhhCCHHHHHHHHH
Confidence 444332222212 2245566655544
No 362
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=36.67 E-value=1.9e+02 Score=25.24 Aligned_cols=94 Identities=10% Similarity=0.097 Sum_probs=47.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH----HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM----ARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~----~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|..|++..-.-...... ....+.++..+..|. -|.+.+++.+..
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDV-----SNTDIVTKTIQQIDAD 89 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeC-----CCHHHHHHHHHHHHHh
Confidence 4566665554444556677778887766543322222222 222366676676653 256666665532
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~ 255 (471)
+... ++++.. ...+ ...+.+++++..+
T Consensus 90 ~~~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 1h5q_A 90 LGPISG-LIANAGVSVVKPATELTHEDFAFVYD 121 (265)
T ss_dssp SCSEEE-EEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCE-EEECCCcCCCCchhhCCHHHHHHHHh
Confidence 2333 344432 2222 2346666665544
No 363
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=36.63 E-value=61 Score=30.63 Aligned_cols=76 Identities=8% Similarity=0.162 Sum_probs=49.2
Q ss_pred CCCCCChHHHHHHc-CCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 186 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 186 ~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
-|.|.+..++.... ++++..+-+.+. .-.+.+.+++. ...+.+++.+-+ ++.++.+++.++++++ ++
T Consensus 64 vpvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G------~~e~~~~~l~~~a~~~-g~ 132 (334)
T 3mwd_B 64 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEG------IPEALTRKLIKKADQK-GV 132 (334)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSC------CCHHHHHHHHHHHHHH-TC
T ss_pred ceeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCC------CCHHHHHHHHHHHHHc-CC
Confidence 47888888876654 355544433321 13466666676 678877764433 2446788999999999 99
Q ss_pred EEEEccCCC
Q 012095 264 LVLSDEIYE 272 (471)
Q Consensus 264 ~ii~De~y~ 272 (471)
.||==++.+
T Consensus 133 rliGPNc~G 141 (334)
T 3mwd_B 133 TIIGPATVG 141 (334)
T ss_dssp EEECSSCCC
T ss_pred EEEccCCcc
Confidence 888544443
No 364
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=36.58 E-value=1.5e+02 Score=26.18 Aligned_cols=95 Identities=12% Similarity=0.105 Sum_probs=50.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...=..+.+.|.+.|-.|++. .-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANV-----GQPAKIKEMFQQIDETF 80 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCC-----CCHHHHHHHHHHHHHHc
Confidence 45555555444455667788889877663 3322212222 233466777777653 266666665532
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.++++++.++
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 112 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNI 112 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344444333222222 24677777766554
No 365
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=36.55 E-value=1.6e+02 Score=26.52 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=51.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---HcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
..++||.|+...=..+.+.|.+.|-.|++.+-.-........ ..|.++..+..|-. |.+.+++.+..
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 83 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-----DEALHEALVELAVRRF 83 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 445565555444455667788889888776543222222222 23667777776532 56666665532
Q ss_pred -CCcEEEEcCCC-C-Ccc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPS-N-PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~-N-PtG--~~~~~~~l~~i~~l 256 (471)
+..++ ++|.. . +.+ ...+.+++++..++
T Consensus 84 g~iD~l-vnnAg~~~~~~~~~~~~~~~~~~~~~v 116 (280)
T 3tox_A 84 GGLDTA-FNNAGALGAMGEISSLSVEGWRETLDT 116 (280)
T ss_dssp SCCCEE-EECCCCCCSCSCGGGCCHHHHHHHHHH
T ss_pred CCCCEE-EECCCCCCCCCChhhCCHHHHHHHHHH
Confidence 34444 44432 1 222 24577777766654
No 366
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.28 E-value=1.2e+02 Score=27.04 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=51.0
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH---HHcC-CEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA---RIAD-ATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~---~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-....... +..+ .++..+..|- -|.+.+++.+..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 83 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDV-----SDRAQCDALAGRAV 83 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCC-----CCHHHHHHHHHHHH
Confidence 4445666665555445667778888877776543222222222 2223 4666666653 256666655532
Q ss_pred ----CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 84 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 118 (262)
T 3pk0_A 84 EEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAV 118 (262)
T ss_dssp HHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455444333222222 24576777666553
No 367
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=36.26 E-value=1.5e+02 Score=26.24 Aligned_cols=97 Identities=10% Similarity=0.095 Sum_probs=49.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-...... ++..|.++..+..|- -|.+.+++.+..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDV-----TSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 334566666555544566777888887776643221111112 222366676776653 256666655432
Q ss_pred ---CCcEEEEcCCCC-Ccc--cCCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSN-PTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~N-PtG--~~~~~~~l~~i~~ 255 (471)
+...++-+.... +.+ ...+.++++++.+
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 445444332222 222 2356677766554
No 368
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=35.97 E-value=89 Score=27.66 Aligned_cols=96 Identities=9% Similarity=0.102 Sum_probs=48.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcC---CCCeEEEcCCCCCChHHHHHHc-----CCEEEEecCCCCCCCcCCHHHHHhhhc-
Q 012095 156 DQILVSNGAKQSILQAVLAVCS---PGDEVIIPAPFWVSYPEMARIA-----DATPVILPTRISENFLLDPKVLESKLT- 226 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~---~gd~Vlv~~p~y~~~~~~~~~~-----G~~~~~v~~~~~~~~~ld~e~l~~~l~- 226 (471)
..++||.|+...=..+.+.|.+ .|..|++.+-.-.......... |.++..+..|-. |.+.+++.+.
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~ 81 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLG-----TEAGVQRLLSA 81 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTT-----SHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCC-----CHHHHHHHHHH
Confidence 3456665554444556667777 7877776543211122222221 667777776532 5566655442
Q ss_pred --c-----CCc-EEEEcCCCC--Cc-cc--C-CCHHHHHHHHHH
Q 012095 227 --E-----KSR-LLILCSPSN--PT-GS--V-YPKNLLDEIARI 256 (471)
Q Consensus 227 --~-----~~~-~i~i~~p~N--Pt-G~--~-~~~~~l~~i~~l 256 (471)
+ +.. .++++|..- +. +. . .+.++++++.++
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWAL 125 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHH
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHH
Confidence 2 122 155655532 21 11 1 566777766654
No 369
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=35.89 E-value=46 Score=30.66 Aligned_cols=77 Identities=9% Similarity=0.061 Sum_probs=49.6
Q ss_pred CCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 186 APFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 186 ~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
.|.|.+..++......++..+-+.++ .-++.+++++..+.+.+++.+. | ++.++.+++.+.++++ ++.+
T Consensus 50 ~~vy~sl~el~~~~~~Dv~Ii~vp~~----~~~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~-gi~v 118 (288)
T 1oi7_A 50 VPVYDTVKEAVAHHEVDASIIFVPAP----AAADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKAL-GSRL 118 (288)
T ss_dssp EEEESSHHHHHHHSCCSEEEECCCHH----HHHHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHH-TCEE
T ss_pred EEeeCCHHHHhhcCCCCEEEEecCHH----HHHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHc-CCEE
Confidence 45566666666633455544433221 2566777777778886665332 3 3567788999999999 8988
Q ss_pred EEccCCCc
Q 012095 266 LSDEIYEH 273 (471)
Q Consensus 266 i~De~y~~ 273 (471)
+-..+...
T Consensus 119 igPNc~Gi 126 (288)
T 1oi7_A 119 IGGNCPGI 126 (288)
T ss_dssp EESSSCEE
T ss_pred EeCCCCeE
Confidence 87776543
No 370
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=35.85 E-value=57 Score=30.88 Aligned_cols=106 Identities=17% Similarity=0.103 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCC--CcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTP--DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~--~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.|....|-+....... ..|. +.+ ..|+-++++..++..+..+- +.-.-+|++|+-.-..-...++.+|++++.++
T Consensus 62 tGSfK~RgA~~~i~~a~~~g~-l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~ 140 (344)
T 3vc3_A 62 TASIADRPAYAMITDAEEKNL-ITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTD 140 (344)
T ss_dssp TSBTTHHHHHHHHHHHHHTTC-CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHHcCC-CCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEEC
Confidence 4666666654433322 2232 233 35777778888887666553 22224566766544445577899999999886
Q ss_pred CCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCC
Q 012095 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNP 240 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NP 240 (471)
... ++.-......+...+.+...++....||
T Consensus 141 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~np 171 (344)
T 3vc3_A 141 PAK--GMGGTVKKAYELLENTPNAHMLQQFSNP 171 (344)
T ss_dssp GGG--HHHHHHHHHHHHHHHSTTEECCCTTTCH
T ss_pred CCC--cchHHHHHHHHHHhhccCceeccccccc
Confidence 421 1111122222223344555555544555
No 371
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=35.74 E-value=52 Score=29.27 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=51.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----C
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE-----K 228 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-----~ 228 (471)
....++||.|+...=..+.+.|.+.|..|++.+- ......+..+.++..+..|-. |.+.+++++.. +
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~g~ 79 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASALDLAETMGT 79 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHhCC
Confidence 3345666655554445567778888877766443 234455666777777776532 56666655431 2
Q ss_pred CcEEEEcCCC-CCccc------CCCHHHHHHHHHH
Q 012095 229 SRLLILCSPS-NPTGS------VYPKNLLDEIARI 256 (471)
Q Consensus 229 ~~~i~i~~p~-NPtG~------~~~~~~l~~i~~l 256 (471)
.. ++++|.. ...+. ..+.++++++.++
T Consensus 80 id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 80 LR-IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EE-EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 33 4444432 11111 2677777776654
No 372
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=35.62 E-value=1.4e+02 Score=26.29 Aligned_cols=98 Identities=13% Similarity=-0.078 Sum_probs=48.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT---- 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~---- 226 (471)
....++||.|+...=..+.+.|++.|..|++..-.-...... ++..|.++..+..|. -|.+.+++.+.
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-----SLRPEREKLMQTVSS 87 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHHHHHH
Confidence 334566665544444556677778887776643221111111 222355666666543 25666666553
Q ss_pred ---cCCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 ---EKSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 ---~~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.+..+++.+....+.+ ...+.+++++..+.
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 122 (266)
T 1xq1_A 88 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHIST 122 (266)
T ss_dssp HHTTCCSEEEEECCC------CCCCHHHHHHHHHH
T ss_pred HhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3455555443322222 23466666655543
No 373
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=35.60 E-value=1.5e+02 Score=26.83 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=49.0
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---H-----cCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---I-----ADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~-----~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
...++||.|+...-..+.+.|++.|..|++..-.-.......+ . .+.++..+..|. -|.+.+++.+.
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 92 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-----RNEEEVNNLVK 92 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCC-----CCHHHHHHHHH
Confidence 3456666555444455667777888777764322111111111 1 355676776653 26666766654
Q ss_pred c------CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 227 E------KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 227 ~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
. +..+++-+....+.+ ...+.+++++..+
T Consensus 93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3 455554333222222 2356666665554
No 374
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.27 E-value=1.2e+02 Score=27.54 Aligned_cols=97 Identities=11% Similarity=0.105 Sum_probs=48.5
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCC---EEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA---TPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-...... +...|. ++..+..|- -|.+.+++++..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~d~~~v~~~~~~ 99 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV-----TEASGQDDIINT 99 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCC-----CCHHHHHHHHHH
Confidence 334566665555444566777888887777653321111111 222344 566666543 266666665542
Q ss_pred ------CCcEEEEcCCCCCcc----cCCCHHHHHHHHH
Q 012095 228 ------KSRLLILCSPSNPTG----SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ------~~~~i~i~~p~NPtG----~~~~~~~l~~i~~ 255 (471)
+..+++-+......+ ...+.++++++.+
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~ 137 (297)
T 1xhl_A 100 TLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFK 137 (297)
T ss_dssp HHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHh
Confidence 445444333222222 2356666666554
No 375
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=35.20 E-value=1.6e+02 Score=26.01 Aligned_cols=97 Identities=6% Similarity=-0.050 Sum_probs=47.4
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCC--EEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADA--TPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~--~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
....++||.|+...-..+.+.|++.|-.|++.+-.-..........+. ++..+..|. -|.+.+++++..
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 89 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV-----TKDEDVRNLVDTTIAK 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCC-----CCHHHHHHHHHHHHHH
Confidence 334567776655544566777778887777653221111222222221 455555543 266667666542
Q ss_pred --CCcEEEEcCCCC-C-cc--cCCCHHHHHHHHH
Q 012095 228 --KSRLLILCSPSN-P-TG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 --~~~~i~i~~p~N-P-tG--~~~~~~~l~~i~~ 255 (471)
+...++-+.... + .+ ...+.+++++..+
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~ 123 (278)
T 2bgk_A 90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 123 (278)
T ss_dssp HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHH
Confidence 455554332211 1 11 2345566665554
No 376
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.15 E-value=1.2e+02 Score=27.09 Aligned_cols=95 Identities=6% Similarity=0.053 Sum_probs=46.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH---HcCC---EEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR---IADA---TPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~---~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
..++||.|+...=..+.+.|++.|..|++.+-.-........ ..|. ++..+..|- -|.+.+++++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-----TTEDGQDQIINSTL 81 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecC-----CCHHHHHHHHHHHH
Confidence 456666555544455677778888777764322111122221 2233 566666543 256666665532
Q ss_pred ----CCcEEEEcCCCCCcc------cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSPSNPTG------SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p~NPtG------~~~~~~~l~~i~~ 255 (471)
+..+++-+......+ ...+.+++++..+
T Consensus 82 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 119 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLK 119 (280)
T ss_dssp HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHH
Confidence 345444332222112 2346666665554
No 377
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=35.00 E-value=62 Score=32.98 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=56.8
Q ss_pred EEEeCChHHHHHHHHHHh---------cCCCCeEEEcCCCCCChH-------HHHHHcCCEEEEecCCC-CCCCcCCHHH
Q 012095 158 ILVSNGAKQSILQAVLAV---------CSPGDEVIIPAPFWVSYP-------EMARIADATPVILPTRI-SENFLLDPKV 220 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l---------~~~gd~Vlv~~p~y~~~~-------~~~~~~G~~~~~v~~~~-~~~~~ld~e~ 220 (471)
|++++|++......+.-+ .+++|.|++....+++.. ......|++++...... .-..--|.++
T Consensus 309 vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~e 388 (562)
T 3bk2_A 309 LILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEE 388 (562)
T ss_dssp EEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHH
T ss_pred EEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHH
Confidence 677787643222222222 378999999888887763 33456788887543110 0011247777
Q ss_pred HHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 221 LESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 221 l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
|...++. +|+.++..+.. ...+.++++++++. ++
T Consensus 389 L~~~i~~~~Pk~vipvHGe--------~~~~~~~~~~~~~~-g~ 423 (562)
T 3bk2_A 389 LKLILNLTTPRFFLPWHGE--------VRHQMNFKWLAESM-SR 423 (562)
T ss_dssp HHHHHHHHCCSEEEEESBC--------HHHHHHHHHHHHTS-SS
T ss_pred HHHHHHhcCCCEEEEEcCC--------HHHHHHHHHHHHHc-CC
Confidence 7777643 67877765532 33467777888775 53
No 378
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.96 E-value=80 Score=27.95 Aligned_cols=95 Identities=11% Similarity=0.174 Sum_probs=47.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH---c--C-CEEEEecCCCCCCCcCCHHHHHhhhcc-
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI---A--D-ATPVILPTRISENFLLDPKVLESKLTE- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~---~--G-~~~~~v~~~~~~~~~ld~e~l~~~l~~- 227 (471)
...++||.|+...=..+.+.|.+.|..|++..-.-.......+. . + .++..++.|- -|.+.+++.+..
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~ 81 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI-----TDCTKADTEIKDI 81 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCT-----TCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccC-----CCHHHHHHHHHHH
Confidence 34566665555444566677778887777654332222222221 1 2 4555666543 266666665532
Q ss_pred -----CCcEEEEcCCC-C-CcccCCCHHHHHHHHH
Q 012095 228 -----KSRLLILCSPS-N-PTGSVYPKNLLDEIAR 255 (471)
Q Consensus 228 -----~~~~i~i~~p~-N-PtG~~~~~~~l~~i~~ 255 (471)
+.. ++++|.. . +.....+.+++++..+
T Consensus 82 ~~~~g~iD-~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 82 HQKYGAVD-ILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHHCCEE-EEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HHhcCCCC-EEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 333 4444442 2 2222445566665554
No 379
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=34.91 E-value=2.2e+02 Score=24.54 Aligned_cols=95 Identities=18% Similarity=0.084 Sum_probs=48.3
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHH-cCCEEEEecCCCCCCCcCCHHHHHhhhcc--CCc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARI-ADATPVILPTRISENFLLDPKVLESKLTE--KSR 230 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~-~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--~~~ 230 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-.......+. .+.+++..++ -|.+.+++.+.. +..
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~id 78 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDL-------GDWDATEKALGGIGPVD 78 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCT-------TCHHHHHHHHTTCCCCS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecC-------CCHHHHHHHHHHcCCCC
Confidence 344677776655544566777778887777654321112222222 3555543322 267788887763 345
Q ss_pred EEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 231 LLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 231 ~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+++-+....+.+ ...+.+++++..+
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 105 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSFS 105 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEEECCcccCCCCcccCCHHHHHHHHh
Confidence 554333222222 2345566655443
No 380
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=34.80 E-value=1.3e+02 Score=22.38 Aligned_cols=91 Identities=13% Similarity=0.007 Sum_probs=50.2
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i 234 (471)
.+|+++.++.-+.. ++..+...| ..|.+.+..-. -...+...|...+.... -+.+.+++.+. +..+++.
T Consensus 6 ~~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~~-~~~~~~~~~~~~~~~d~-------~~~~~~~~~~~-~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGAGKIGQM-IAALLKTSSNYSVTVADHDLA-ALAVLNRMGVATKQVDA-------KDEAGLAKALG-GFDAVIS 75 (118)
T ss_dssp EEEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCHH-HHHHHHTTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred CeEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCHH-HHHHHHhCCCcEEEecC-------CCHHHHHHHHc-CCCEEEE
Confidence 35666655444444 444555667 56665554321 11222344666544432 26677877765 5677776
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.|.. .-..+.+.|.+. ++..+
T Consensus 76 ~~~~~---------~~~~~~~~~~~~-g~~~~ 97 (118)
T 3ic5_A 76 AAPFF---------LTPIIAKAAKAA-GAHYF 97 (118)
T ss_dssp CSCGG---------GHHHHHHHHHHT-TCEEE
T ss_pred CCCch---------hhHHHHHHHHHh-CCCEE
Confidence 65422 135777888887 77655
No 381
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.32 E-value=2.8e+02 Score=25.49 Aligned_cols=107 Identities=13% Similarity=0.265 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.+=|+.+.+...+..+ ..--|++..| ..+++..+-.+ .+-| |.|++..|+|....+
T Consensus 67 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~~s~---------------- 126 (304)
T 3l21_A 67 DGEKIELLRAVLEAVG---DRARVIAGAGTYDTAHSIRLAKAC-AAEGAHGLLVVTPYYSKPPQ---------------- 126 (304)
T ss_dssp HHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHH-HHHTCSEEEEECCCSSCCCH----------------
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHH-HHcCCCEEEECCCCCCCCCH----------------
Confidence 3444445444443322 1124666544 45555543333 2334 889988888753210
Q ss_pred CCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 211 SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
++ -.+.+++.... +.-+++.+.|.. ||..++.+.+.+| + ++|++.=|=|..
T Consensus 127 -~~---l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~L---a-~~pnIvgiKdss 178 (304)
T 3l21_A 127 -RG---LQAHFTAVADATELPMLLYDIPGR-SAVPIEPDTIRAL---A-SHPNIVGVXDAK 178 (304)
T ss_dssp -HH---HHHHHHHHHTSCSSCEEEEECHHH-HSSCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred -HH---HHHHHHHHHHhcCCCEEEEeCccc-cCCCCCHHHHHHH---h-cCCCEEEEECCC
Confidence 00 11112221111 233455555543 7888885555444 4 466766666644
No 382
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.19 E-value=2e+02 Score=24.74 Aligned_cols=94 Identities=18% Similarity=0.160 Sum_probs=47.2
Q ss_pred cEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-------
Q 012095 157 QILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------- 227 (471)
.++||.|+...-..+.+.|++.| ..|++..-.-..........+.++..+..|. -|.+.+++.+..
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV-----TCDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCT-----TCHHHHHHHHHHHHHHHGG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeec-----CCHHHHHHHHHHHHHhcCC
Confidence 46666555444456677788888 6776543322222222221244566666543 255666655531
Q ss_pred -CCcEEEEcCCCCC-cc--cCCCHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNP-TG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 -~~~~i~i~~p~NP-tG--~~~~~~~l~~i~~ 255 (471)
+..+++.+....+ .+ ...+.+++++..+
T Consensus 80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 4555554433222 22 2345666665554
No 383
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.02 E-value=2.4e+02 Score=24.69 Aligned_cols=93 Identities=14% Similarity=0.072 Sum_probs=46.7
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...++||.|+...=..+.+.|.+.|..|++.+-.-.. ....+..+ + ..+..|- -|.+.+++.+.. +
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~-----~~~~~~~~~~~~~~~~~g~ 77 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDL-----EDERERVRFVEEAAYALGR 77 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeC-----CCHHHHHHHHHHHHHHcCC
Confidence 3456666655554456677788888777664432222 33333333 2 3444432 256666665532 4
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
..+++-+....+.+ ...+.+++++..+
T Consensus 78 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 106 (256)
T 2d1y_A 78 VDVLVNNAAIAAPGSALTVRLPEWRRVLE 106 (256)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 45444333222222 2346666666554
No 384
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=33.89 E-value=1.5e+02 Score=26.32 Aligned_cols=89 Identities=10% Similarity=0.080 Sum_probs=46.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------C
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------K 228 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~ 228 (471)
...++||.|+...-..+.+.|.+.|..|++..-.-.. +.++..+..|- -|.+.+++++.. +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDV-----TNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCT-----TCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecC-----CCHHHHHHHHHHHHHHcCC
Confidence 3456777665554556677788888777654322111 33344444432 266666665542 4
Q ss_pred CcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 229 SRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 229 ~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
..+++-+......+ ...+.++++++.++
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDV 104 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 55444333222222 23466667666553
No 385
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=33.74 E-value=1.7e+02 Score=25.26 Aligned_cols=94 Identities=11% Similarity=0.078 Sum_probs=47.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEE-cCCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv-~~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...=..+.+.|++.|..|++ ..-.-..... .++..+.++..+..|. -|.+.+++.+..
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-----SKEADVEAMMKTAIDAW 77 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-----TSHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCC-----CCHHHHHHHHHHHHHHc
Confidence 3555544444335566677788877766 2322111111 1233466777776653 266677666542
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++-+......+ ...+.+++++..+
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 455555433222222 2346666665544
No 386
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=33.36 E-value=1.2e+02 Score=27.07 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=36.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
....++||.|+...=..+.+.|.+.|..|++..-.-...... .+..+.++..+..|. -|.+.+++.+.
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 103 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI-----SDPKSVEETIS 103 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCT-----TCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeec-----CCHHHHHHHHH
Confidence 444566665544433456666777787776543332222222 233466666666543 26666666554
No 387
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.15 E-value=1.4e+02 Score=27.59 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.+=|..+.+...+..| .--|++..| ..+++..+-.+ .+-| |.|++..|+|....+.+..
T Consensus 60 ~~Er~~v~~~~v~~~g----rvpViaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~~~~s~~~l~~------------ 122 (313)
T 3dz1_A 60 AAEAEAVATRFIKRAK----SMQVIVGVSAPGFAAMRRLARLS-MDAGAAGVMIAPPPSLRTDEQITT------------ 122 (313)
T ss_dssp HHHHHHHHHHHHHHCT----TSEEEEECCCSSHHHHHHHHHHH-HHHTCSEEEECCCTTCCSHHHHHH------------
T ss_pred HHHHHHHHHHHHHHcC----CCcEEEecCCCCHHHHHHHHHHH-HHcCCCEEEECCCCCCCCHHHHHH------------
Confidence 3444444444433322 124666554 45555543332 2334 8888887765432211100
Q ss_pred CCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC
Q 012095 211 SENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~ 272 (471)
-.+.+.++..++.-+++.+.|.. ||..++.+ -+.++++++|++.=|=|++..
T Consensus 123 ------~f~~va~a~~~~lPiilYn~P~~-tg~~l~~~---~~~~La~~~pnIvgiKd~~~~ 174 (313)
T 3dz1_A 123 ------YFRQATEAIGDDVPWVLQDYPLT-LSVVMTPK---VIRQIVMDSASCVMLKHEDWP 174 (313)
T ss_dssp ------HHHHHHHHHCTTSCEEEEECHHH-HCCCCCHH---HHHHHHHHCSSEEEEEECCSS
T ss_pred ------HHHHHHHhCCCCCcEEEEeCccc-cCcCCCHH---HHHHHHHhCCCEEEEEcCCCC
Confidence 11233333322234566666754 88888854 445555566677777775443
No 388
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=33.03 E-value=92 Score=27.88 Aligned_cols=66 Identities=8% Similarity=0.044 Sum_probs=33.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHc------CCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA------DATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~------G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
..++||.|+...=..+.+.|.+.|..|++..-.-.......+.. +.++..+..|- -|.+.+++++.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~ 78 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-----TTDAGQDEILS 78 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-----TSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEeccc-----CCHHHHHHHHH
Confidence 34555555444345566677788877776432211111222221 33555666543 25666666554
No 389
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=33.01 E-value=45 Score=30.12 Aligned_cols=48 Identities=10% Similarity=0.195 Sum_probs=28.5
Q ss_pred CcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEc
Q 012095 214 FLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 214 ~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~D 268 (471)
|-+|.-++.++..-+..+|.+. ...++.++++++.+.|++. |+.+++|
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi------~a~l~~~~l~~l~~~a~~l-Gl~~lvE 156 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILII------ARILTAEQIKEIYEAAEEL-GMDSLVE 156 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEE------GGGSCHHHHHHHHHHHHTT-TCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEe------cccCCHHHHHHHHHHHHHc-CCeEEEE
Confidence 5555555555444455555542 2245666777777777777 7766665
No 390
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=32.90 E-value=1.2e+02 Score=27.46 Aligned_cols=95 Identities=7% Similarity=0.150 Sum_probs=48.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCC---eEEEcCCCCCChHHHHHH-----cCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGD---EVIIPAPFWVSYPEMARI-----ADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd---~Vlv~~p~y~~~~~~~~~-----~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
..++||.|+...=..+.+.|++.|. .|++..-.-.......+. .|.++..+.+|-. |.+.+++.+..
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~ 108 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIEN 108 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHHT
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHH
Confidence 4566665555444555666766664 666544322222222222 2678888877642 55555555432
Q ss_pred ------CCcEEEEcCCC-C-Ccc--cCCCHHHHHHHHHH
Q 012095 228 ------KSRLLILCSPS-N-PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ------~~~~i~i~~p~-N-PtG--~~~~~~~l~~i~~l 256 (471)
+... +++|.. . +.+ ...+.++++++.++
T Consensus 109 ~~~~~g~iD~-lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 109 LPQEFKDIDI-LVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp SCGGGCSCCE-EEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHHhcCCCCE-EEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 3444 444442 2 222 23577777776654
No 391
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=32.31 E-value=2e+02 Score=23.13 Aligned_cols=104 Identities=12% Similarity=0.073 Sum_probs=62.2
Q ss_pred CcEEEeCCh--HHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 156 DQILVSNGA--KQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 156 ~~i~it~G~--~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
..++++-+. ...+..+.+.+.+-|=+++.... ....++..|..+..|.-..+++-.-+...+.+.+.++---++
T Consensus 25 ~gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~G----Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lV 100 (143)
T 2yvq_A 25 KGILIGIQQSFRPRFLGVAEQLHNEGFKLFATEA----TSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLV 100 (143)
T ss_dssp SEEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHH----HHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEE
T ss_pred CCEEEEecccchHHHHHHHHHHHHCCCEEEECch----HHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEE
Confidence 347777665 66666667777777767665543 345567788888777543322100011235555654444455
Q ss_pred EcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 012095 234 LCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 234 i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
|+.|.. ...+..+-..|.+.|-.| +++++.
T Consensus 101 Int~~~---~~~~~~d~~~iRR~Av~~-~IP~~T 130 (143)
T 2yvq_A 101 INLPNN---NTKFVHDNYVIRRTAVDS-GIPLLT 130 (143)
T ss_dssp EECCCC---CGGGHHHHHHHHHHHHHT-TCCEEC
T ss_pred EECCCC---CCcCCccHHHHHHHHHHh-CCCeEc
Confidence 666632 123366788999999999 998874
No 392
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=32.18 E-value=2.9e+02 Score=25.54 Aligned_cols=107 Identities=13% Similarity=0.162 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHH--HHHHcCCEEEEecC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPT 208 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~G~~~~~v~~ 208 (471)
.+=|+.+.+...+..+ ..--|++..| ..+++..+-.+ .+-| |.|++..|+|....+ +.+
T Consensus 76 ~~Er~~v~~~~v~~~~---grvpViaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~----------- 140 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVA---HRVPTIVSVSDLTTAKTVRRAQFA-ESLGAEAVMVLPISYWKLNEAEVFQ----------- 140 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHH-HHTTCSEEEECCCCSSCCCHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-----------
Confidence 3444444444443322 1123665555 55666644333 3445 999999998853210 000
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
-.+.+.++. ..-+++.+.|.. ||..++.+.+. +++.++|++.=|=|..
T Consensus 141 --------~f~~va~a~--~lPiilYn~P~~-tg~~l~~~~~~---~L~a~~pnIvgiKdss 188 (315)
T 3na8_A 141 --------HYRAVGEAI--GVPVMLYNNPGT-SGIDMSVELIL---RIVREVDNVTMVKEST 188 (315)
T ss_dssp --------HHHHHHHHC--SSCEEEEECHHH-HSCCCCHHHHH---HHHHHSTTEEEEEECS
T ss_pred --------HHHHHHHhC--CCcEEEEeCcch-hCcCCCHHHHH---HHHhcCCCEEEEECCC
Confidence 011222221 233555566653 78888855444 4433456776666543
No 393
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=31.88 E-value=1.8e+02 Score=25.40 Aligned_cols=95 Identities=7% Similarity=-0.033 Sum_probs=48.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcC-CCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPA-PFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~-p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|..|++.. ..-.... ...+..+.++..+..|- -|.+.+++.+..
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNV-----GDWDSTKQAFDKVKAE 88 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCC-----CCHHHHHHHHHHHHHh
Confidence 3455554444433556677788887776533 3333332 23344566666666543 266666665532
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+.. +++++.. .+.+ ...+.+++++..+.
T Consensus 89 ~g~id-~lv~~Ag~~~~~~~~~~~~~~~~~~~~v 121 (256)
T 3ezl_A 89 VGEID-VLVNNAGITRDVVFRKMTREDWQAVIDT 121 (256)
T ss_dssp TCCEE-EEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCCCCchhhCCHHHHHHHHHH
Confidence 333 3444442 2222 23566666666553
No 394
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=31.84 E-value=1.7e+02 Score=27.02 Aligned_cols=94 Identities=13% Similarity=0.131 Sum_probs=50.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcC--CCCCCh------HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPA--PFWVSY------PEMARIADATPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~--p~y~~~------~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
..++||.|+...=..+.+.|++.|..|++.. +.-... ...+...|.++..+.+|- -|.+.+++++..
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dv-----td~~~v~~~~~~ 80 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDV-----QSQVSVDRAIDQ 80 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCT-----TCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeec-----CCHHHHHHHHHH
Confidence 3456665555544566777888998887532 111111 122334566777777653 266666665542
Q ss_pred ------CCcEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 012095 228 ------KSRLLILCSP-SNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ------~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~ 255 (471)
+..++ ++|. ..+.| ...+.++++++.+
T Consensus 81 ~~~~~g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 81 IIGEDGRIDVL-IHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHHSCCSEE-EECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHHcCCCCEE-EECCCcCCCCChhhCCHHHHHHHHH
Confidence 44544 4443 22222 2346666665554
No 395
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=31.84 E-value=1.4e+02 Score=25.79 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=46.6
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCC-------eEEEcCCCCCChHHHH---HHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGD-------EVIIPAPFWVSYPEMA---RIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd-------~Vlv~~p~y~~~~~~~---~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
.++||.|+...-..+.+.|++.|. .|++..-.-....... +..+.++..+..|. -|.+.+++++.
T Consensus 4 ~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~ 78 (244)
T 2bd0_A 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-----SDMADVRRLTT 78 (244)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-----TSHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecC-----CCHHHHHHHHH
Confidence 355655444433455666776775 6665432211111222 12366777776653 26666666554
Q ss_pred c------CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 227 E------KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 227 ~------~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
. +...++.+....+.+ ...+.+++++..+.
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 116 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNT 116 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHH
Confidence 2 455555433322222 23466666655543
No 396
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=31.83 E-value=2.9e+02 Score=25.11 Aligned_cols=87 Identities=11% Similarity=0.255 Sum_probs=46.2
Q ss_pred cEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCc
Q 012095 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (471)
Q Consensus 157 ~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~ 230 (471)
-|++..|+ .+++..+-.+ .+-| |.|++..|+|.... .+.+ -.+.+.++. +.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 128 (294)
T 2ehh_A 71 KVIAGTGGNATHEAVHLTAHA-KEVGADGALVVVPYYNKPTQRGLYE-------------------HFKTVAQEV--DIP 128 (294)
T ss_dssp EEEEECCCSCHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHC--CSC
T ss_pred cEEEecCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 46666554 5666644433 3445 89999889884311 1110 011222221 233
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
+++.+.|.. ||..++.+.+.+| ++++|++.=|=|.
T Consensus 129 iilYn~P~~-tg~~l~~~~~~~L---a~~~pnivgiKds 163 (294)
T 2ehh_A 129 IIIYNIPSR-TCVEISVDTMFKL---ASECENIVASKES 163 (294)
T ss_dssp EEEEECHHH-HSCCCCHHHHHHH---HHHCTTEEEEEEC
T ss_pred EEEEeCCcc-cCcCCCHHHHHHH---HhhCCCEEEEEeC
Confidence 555666654 8888996655444 4456666656554
No 397
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=31.31 E-value=1.4e+02 Score=26.93 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=35.3
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCC-CChHHHH---H-HcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFW-VSYPEMA---R-IADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y-~~~~~~~---~-~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
..++||.|+...=..+.+.|.+.|..|++..-.- ....... . ..|.++..+..|-.+ ..-+.+.+++.+.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN-SNVLPASCEEIIN 98 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC-STTHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC-ccCCHHHHHHHHH
Confidence 4556665554444556667777887776643322 1112222 1 346667777665321 0000666666553
No 398
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=30.14 E-value=1.8e+02 Score=25.47 Aligned_cols=95 Identities=3% Similarity=-0.026 Sum_probs=47.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|..|++..- .-..... .++..+.++..+..|.. |.+.+++.+..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT-----VESDVINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 45666655544445566677778877766432 1111111 12234667777766532 56666655532
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+...++.+....+.+ ...+.+++++..+
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 455554433322222 2346566655544
No 399
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=29.83 E-value=3.2e+02 Score=24.80 Aligned_cols=106 Identities=13% Similarity=0.219 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecCC
Q 012095 136 ELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTR 209 (471)
Q Consensus 136 ~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~ 209 (471)
+=|+.+.+...+..+ ..--|++..|+ .+++..+-.+ -+-| |.|++..|+|.... .+.+
T Consensus 53 ~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~~s~~~l~~------------ 116 (289)
T 2yxg_A 53 EEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFA-EDVGADAVLSITPYYNKPTQEGLRK------------ 116 (289)
T ss_dssp HHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHH-HHHTCSEEEEECCCSSCCCHHHHHH------------
T ss_pred HHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH------------
Confidence 444444444443322 11246666554 5566544333 2335 88998888884311 1111
Q ss_pred CCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 210 ISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 210 ~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
-.+.+.++. +.-+++.+.|.. ||..++.+.+.+| ++++|++.=|=|..
T Consensus 117 -------~f~~ia~a~--~lPiilYn~P~~-tg~~l~~~~~~~L---a~~~pnivgiK~s~ 164 (289)
T 2yxg_A 117 -------HFGKVAESI--NLPIVLYNVPSR-TAVNLEPKTVKLL---AEEYSNISAVKEAN 164 (289)
T ss_dssp -------HHHHHHHHC--SSCEEEEECHHH-HSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred -------HHHHHHHhc--CCCEEEEeCccc-cCcCCCHHHHHHH---HHhCCCEEEEEeCC
Confidence 011222221 234556677764 8999996655444 54566766565544
No 400
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=29.58 E-value=1.9e+02 Score=26.64 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=0.0
Q ss_pred hHHHHHHcCCEEEEecCCCCCC-CcCCHHHHHhhhcc-----CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEE
Q 012095 192 YPEMARIADATPVILPTRISEN-FLLDPKVLESKLTE-----KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLV 265 (471)
Q Consensus 192 ~~~~~~~~G~~~~~v~~~~~~~-~~ld~e~l~~~l~~-----~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~i 265 (471)
....++..|+..+.+-...-.. +.++.+.+.+..+. +.-+++.+.|. ||..++ .+.+.++++++|++.=
T Consensus 95 la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~--tg~~l~---~~~~~~La~~~pnIvg 169 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPA--SGTALS---APFLARMAREIEQVAY 169 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGG--GCCCCC---HHHHHHHHHHSTTEEE
T ss_pred HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCC--CCCCCC---HHHHHHHHhhCCCEEE
Q ss_pred EEccC
Q 012095 266 LSDEI 270 (471)
Q Consensus 266 i~De~ 270 (471)
|=||+
T Consensus 170 iK~~~ 174 (309)
T 3fkr_A 170 FXIET 174 (309)
T ss_dssp EEECS
T ss_pred EECCC
No 401
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=29.26 E-value=2e+02 Score=25.60 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=51.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCC---EEEEecCCCCCCCcCCHHHHHhhhcc
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA---TPVILPTRISENFLLDPKVLESKLTE 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~---~~~~v~~~~~~~~~ld~e~l~~~l~~ 227 (471)
....++||.|+...=..+.+.|++.|-.|++.+-.-...... ++..|. ++..+..|- -|.+.+++.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~ 84 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI-----TNEDETARAVDA 84 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCT-----TSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCC-----CCHHHHHHHHHH
Confidence 444566666655544566777888898777654322222222 222333 677776653 266666665542
Q ss_pred ------CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 ------KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ------~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+... .+.+ ...+.++++++.++
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 122 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDL 122 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 34444433222 2222 34577777766553
No 402
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=29.23 E-value=2.3e+02 Score=24.82 Aligned_cols=97 Identities=12% Similarity=0.070 Sum_probs=48.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
....++||.|+...=..+.+.|.+.|-.|++.+-.-...... ++..|.++..+..|. -|.+.+++.+..
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~ 87 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHV-----GKAEDRERLVAMAVN 87 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccC-----CCHHHHHHHHHHHHH
Confidence 334566665555444566777788887776643221111111 223466666666543 256666655532
Q ss_pred ---CCcEEEEcCCCCC-cc--cCCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNP-TG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~NP-tG--~~~~~~~l~~i~~ 255 (471)
+..+++-+....+ .+ ...+.++++++.+
T Consensus 88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 121 (260)
T 2zat_A 88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILH 121 (260)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHH
Confidence 4454443332222 22 2356666666554
No 403
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=29.14 E-value=2.3e+02 Score=24.92 Aligned_cols=96 Identities=7% Similarity=-0.017 Sum_probs=49.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEE-cCCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVII-PAPFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv-~~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|..|++ ..-.-.... ..+...+.++..+..|- -|.+.+++.+..
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDV-----ANREQCREVLEHEIAQ 101 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHH
Confidence 45666655555445667778888987754 322111111 22334466777777653 266666665542
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+......+ ...+.+++++..+.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHT 134 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHH
Confidence 444444332222222 23576777666553
No 404
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=29.07 E-value=1.7e+02 Score=25.79 Aligned_cols=96 Identities=10% Similarity=0.086 Sum_probs=47.7
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
....++||.|+...-..+.+.|++.|..|++..- .-..... .++..|.++..+..|. -|.+.+++++.+
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~ 94 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADI-----SKPSEVVALFDKAV 94 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecC-----CCHHHHHHHHHHHH
Confidence 3345666655444345566777788877765432 1111111 1223466776676653 266666665542
Q ss_pred ----CCcEEEEcCC-CCCcc--cCCCHHHHHHHHH
Q 012095 228 ----KSRLLILCSP-SNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 ----~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~ 255 (471)
+... ++++. ..+.+ ...+.+++++..+
T Consensus 95 ~~~~~~d~-vi~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (274)
T 1ja9_A 95 SHFGGLDF-VMSNSGMEVWCDELEVTQELFDKVFN 128 (274)
T ss_dssp HHHSCEEE-EECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCcccccCCHHHHHHHHH
Confidence 3343 34433 22222 1346566665554
No 405
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=28.92 E-value=2.5e+02 Score=25.72 Aligned_cols=75 Identities=11% Similarity=-0.043 Sum_probs=40.6
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChHHHH--HH-------cCCEEEEecCCCCCCCcCCHHHHHh
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPEMA--RI-------ADATPVILPTRISENFLLDPKVLES 223 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~~~--~~-------~G~~~~~v~~~~~~~~~ld~e~l~~ 223 (471)
....|+||.|+...-..++..|++.|..|++..- .-....... .. .++++ +..|. -|.+.+++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dl-----~d~~~~~~ 96 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCF--IEGDI-----RDLTTCEQ 96 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEE--EECCT-----TCHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEE--EEccC-----CCHHHHHH
Confidence 4457888765444444566677778877665432 222222211 11 34444 43332 27888888
Q ss_pred hhccCCcEEEEcC
Q 012095 224 KLTEKSRLLILCS 236 (471)
Q Consensus 224 ~l~~~~~~i~i~~ 236 (471)
++. ++.+|+-+.
T Consensus 97 ~~~-~~d~Vih~A 108 (351)
T 3ruf_A 97 VMK-GVDHVLHQA 108 (351)
T ss_dssp HTT-TCSEEEECC
T ss_pred Hhc-CCCEEEECC
Confidence 876 566666443
No 406
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=28.91 E-value=3.4e+02 Score=24.88 Aligned_cols=106 Identities=13% Similarity=0.250 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeC---ChHHHHHHHHHHhcCCC-CeEEEcCCCCCC----hHHHHHHcCCEEEEe
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSN---GAKQSILQAVLAVCSPG-DEVIIPAPFWVS----YPEMARIADATPVIL 206 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~---G~~~al~~~~~~l~~~g-d~Vlv~~p~y~~----~~~~~~~~G~~~~~v 206 (471)
.+=|+.+.+...+..+ ..--|++.. +..+++..+-.+ .+-| |.|++..|.|.. -..+.+.
T Consensus 66 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~~~s~~~l~~~-------- 133 (307)
T 3s5o_A 66 SSERLEVVSRVRQAMP---KNRLLLAGSGCESTQATVEMTVSM-AQVGADAAMVVTPCYYRGRMSSAALIHH-------- 133 (307)
T ss_dssp HHHHHHHHHHHHHTSC---TTSEEEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCTTGGGCCHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHcC---CCCcEEEecCCCCHHHHHHHHHHH-HHcCCCEEEEcCCCcCCCCCCHHHHHHH--------
Confidence 4445555555543322 112355544 345556544333 3345 889988888852 1111111
Q ss_pred cCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 207 PTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 207 ~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
.+.+.++. +.-+++.+.|.. ||..++.+.+.+| + ++|++.=|=|..
T Consensus 134 -----------f~~ia~a~--~lPiilYn~P~~-tg~~l~~~~~~~L---a-~~pnIvgiKdss 179 (307)
T 3s5o_A 134 -----------YTKVADLS--PIPVVLYSVPAN-TGLDLPVDAVVTL---S-QHPNIVGMXDSG 179 (307)
T ss_dssp -----------HHHHHHHC--SSCEEEEECHHH-HSCCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred -----------HHHHHhhc--CCCEEEEeCCcc-cCCCCCHHHHHHH---h-cCCCEEEEEcCC
Confidence 11122211 233455566644 7888885555444 4 356666665543
No 407
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=28.76 E-value=2.7e+02 Score=25.70 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=50.8
Q ss_pred CCCCcEEEeCChHHHHHHHHHHhcC--CCCeEEEcCCCCCC----------hHHHHHHcCCEEEEecCCCCCCCcCCHHH
Q 012095 153 YTPDQILVSNGAKQSILQAVLAVCS--PGDEVIIPAPFWVS----------YPEMARIADATPVILPTRISENFLLDPKV 220 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~----------~~~~~~~~G~~~~~v~~~~~~~~~ld~e~ 220 (471)
+....|+||.|+...-..++..|++ .|..|++.+-.-.. ........+..+..+..|. -|.+.
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~ 82 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI-----NNPLD 82 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT-----TCHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC-----CCHHH
Confidence 3445677776554444556677777 78777654321110 0011122233333444332 26777
Q ss_pred HHhhhccCCcEEEEcCCCCCcccCCCHHH--------HHHHHHHHHhCCCe
Q 012095 221 LESKLTEKSRLLILCSPSNPTGSVYPKNL--------LDEIARIVAKHPRL 263 (471)
Q Consensus 221 l~~~l~~~~~~i~i~~p~NPtG~~~~~~~--------l~~i~~l~~~~~~~ 263 (471)
++++...++.+|+-+...... ..-+.++ ...+++.|++. +.
T Consensus 83 ~~~~~~~~~D~vih~A~~~~~-~~~~~~~~~~~Nv~gt~~ll~aa~~~-~~ 131 (362)
T 3sxp_A 83 LRRLEKLHFDYLFHQAAVSDT-TMLNQELVMKTNYQAFLNLLEIARSK-KA 131 (362)
T ss_dssp HHHHTTSCCSEEEECCCCCGG-GCCCHHHHHHHHTHHHHHHHHHHHHT-TC
T ss_pred HHHhhccCCCEEEECCccCCc-cccCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 877633456666643331111 1122222 24677888887 54
No 408
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=28.58 E-value=1.2e+02 Score=26.60 Aligned_cols=93 Identities=10% Similarity=0.028 Sum_probs=46.9
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCcE
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSRL 231 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~~ 231 (471)
++||.|+...-..+.+.|.+.|..|++..-.-.......+..+.++..+..|- -|.+.+++.+.. +...
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~iD~ 77 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV-----RNRAAIEEMLASLPAEWCNIDI 77 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCT-----TCHHHHHHHHHTSCTTTCCCCE
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCC-----CCHHHHHHHHHHHHHhCCCCCE
Confidence 45554444333455667777887777643221122233334444566666543 266777666542 3344
Q ss_pred EEEcCCCC--Ccc--cCCCHHHHHHHHHH
Q 012095 232 LILCSPSN--PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 232 i~i~~p~N--PtG--~~~~~~~l~~i~~l 256 (471)
+++|..- +.+ ...+.+++++..++
T Consensus 78 -lvnnAg~~~~~~~~~~~~~~~~~~~~~~ 105 (248)
T 3asu_A 78 -LVNNAGLALGMEPAHKASVEDWETMIDT 105 (248)
T ss_dssp -EEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred -EEECCCcCCCCCchhhCCHHHHHHHHHH
Confidence 4444421 112 24566677666553
No 409
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=28.52 E-value=44 Score=30.25 Aligned_cols=82 Identities=11% Similarity=0.201 Sum_probs=53.8
Q ss_pred eEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 181 EVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 181 ~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
.|+++...|.+..+.++..... +.+|+.. .+|-+|+-++.++-.-...+|++ .-..++.++++++.++|++.
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr~~-v~lPvLr-KDFiid~yQI~eAr~~GADaILL------I~a~L~~~~l~~l~~~A~~l 152 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIASS-VSIPILM-SDFIVKESQIDDAYNLGADTVLL------IVKILTERELESLLEYARSY 152 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHHTT-CSSCEEE-ESCCCSHHHHHHHHHHTCSEEEE------EGGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCHHHHHHHHHh-cCCCEee-ccccccHHHHHHHHHcCCCeeeh------HHhhcCHHHHHHHHHHHHHH
Confidence 3677777777665544433211 2345432 46889999888875555666654 23567889999999999998
Q ss_pred CCeEEEEccCCC
Q 012095 261 PRLLVLSDEIYE 272 (471)
Q Consensus 261 ~~~~ii~De~y~ 272 (471)
|+-+++ |++.
T Consensus 153 -Gl~~Lv-EVh~ 162 (258)
T 4a29_A 153 -GMEPLI-LIND 162 (258)
T ss_dssp -TCCCEE-EESS
T ss_pred -hHHHHH-hcch
Confidence 876665 4544
No 410
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.49 E-value=2.4e+02 Score=24.97 Aligned_cols=95 Identities=13% Similarity=0.147 Sum_probs=51.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|..|++. ...-.... ..++..|.++..+..|-. |.+.+++.+..
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 456666665554456677788889887764 22211111 223455777777776532 66666665532
Q ss_pred --CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++++|. ..+.+ ...+.++++++.++
T Consensus 103 ~g~iD-~lvnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 103 FGGVD-VLVNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HSCEE-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 333 445444 22222 24566777766654
No 411
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=28.42 E-value=1.7e+02 Score=25.37 Aligned_cols=98 Identities=16% Similarity=0.208 Sum_probs=47.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcC-CEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD-ATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G-~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|..|++..-.-...... ++..+ .++..+..+.+. -|.+.+++.+..
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~---~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN---ATAQQYRELAARVEHE 91 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTT---CCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEecccc---CCHHHHHHHHHHHHHh
Confidence 4566665555444556777888887777654332222222 22222 333344443222 255666555432
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+... .+.+ ...+.+++++..++
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 125 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHV 125 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHH
Confidence 44555433322 2222 23566777766654
No 412
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=28.36 E-value=1.8e+02 Score=24.66 Aligned_cols=93 Identities=10% Similarity=0.021 Sum_probs=46.5
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCC-HHHHHhhhccCCcEEEEc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLD-PKVLESKLTEKSRLLILC 235 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld-~e~l~~~l~~~~~~i~i~ 235 (471)
+|+||.|+...=..+++.|++.|-.|++..-.-.... ...+.++ +..|. -| .+.+.+++. +..+|+.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~~~~--~~~D~-----~d~~~~~~~~~~-~~d~vi~~ 70 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYNNVKA--VHFDV-----DWTPEEMAKQLH-GMDAIINV 70 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCTTEEE--EECCT-----TSCHHHHHTTTT-TCSEEEEC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcCCceE--EEecc-----cCCHHHHHHHHc-CCCEEEEC
Confidence 3666655444445567778888877665432111100 0133444 44332 25 788888876 46666654
Q ss_pred CCC-CCcccCCCHHHHHHHHHHHHhC
Q 012095 236 SPS-NPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 236 ~p~-NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
... .+.-.-....-...+++.|++.
T Consensus 71 ag~~~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 71 SGSGGKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp CCCTTSSCCCCCCHHHHHHHHHHHHT
T ss_pred CcCCCCCcEeEeHHHHHHHHHHHHHh
Confidence 432 2221222222345566666655
No 413
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.29 E-value=2.7e+02 Score=25.34 Aligned_cols=52 Identities=15% Similarity=0.321 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWV 190 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~ 190 (471)
.+=|+.+.+...+.-+ ..-.|++..| ..+++..+-.+ .+-| |.|++..|+|.
T Consensus 53 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~ 108 (291)
T 3tak_A 53 MEEHTQVIKEIIRVAN---KRIPIIAGTGANSTREAIELTKAA-KDLGADAALLVTPYYN 108 (291)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHH-HHHTCSEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHH-HhcCCCEEEEcCCCCC
Confidence 3444444444443322 1124666554 45555543333 2334 88998888875
No 414
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=28.16 E-value=1.9e+02 Score=29.06 Aligned_cols=99 Identities=13% Similarity=0.196 Sum_probs=52.2
Q ss_pred CCCCcEEEeCChHHHHH-HHHHHhcCCCCe-EEEc-CCCC-------------CC---hHHHHHHcCCEEEEecCCCCCC
Q 012095 153 YTPDQILVSNGAKQSIL-QAVLAVCSPGDE-VIIP-APFW-------------VS---YPEMARIADATPVILPTRISEN 213 (471)
Q Consensus 153 ~~~~~i~it~G~~~al~-~~~~~l~~~gd~-Vlv~-~p~y-------------~~---~~~~~~~~G~~~~~v~~~~~~~ 213 (471)
+.++.+++.+|++.+|- .+.+.|.+.|.. |++. .-.- .. ....++..|.++..+.+|-.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-- 325 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-- 325 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT--
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC--
Confidence 34456666666666664 445566677754 4443 2221 11 22234556889888887642
Q ss_pred CcCCHHHHHhhhcc----CCcEEEEcCC-CCCcc--cCCCHHHHHHHHHH
Q 012095 214 FLLDPKVLESKLTE----KSRLLILCSP-SNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 214 ~~ld~e~l~~~l~~----~~~~i~i~~p-~NPtG--~~~~~~~l~~i~~l 256 (471)
|.+.+++.+.. .+--++|++. ....+ ..++.++++++.+.
T Consensus 326 ---d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~ 372 (525)
T 3qp9_A 326 ---DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTA 372 (525)
T ss_dssp ---SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHH
Confidence 67777776643 1122344443 22223 24566777766653
No 415
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=28.00 E-value=2.9e+02 Score=25.11 Aligned_cols=106 Identities=10% Similarity=0.136 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.+=|+.+.+...+..+- .--|++..|+ .+++.. .+...+-| |.|++..|+|....+
T Consensus 53 ~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~l-a~~a~~~Gadavlv~~P~y~~~s~---------------- 112 (292)
T 2ojp_A 53 HDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISL-TQRFNDSGIVGCLTVTPYYNRPSQ---------------- 112 (292)
T ss_dssp HHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHH-HHHTTTSSCSEEEEECCCSSCCCH----------------
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHH-HHHHHhcCCCEEEECCCCCCCCCH----------------
Confidence 34444444444433221 1237766654 555553 33334556 899999998843110
Q ss_pred CCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 211 SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
++ -.+.+++.... +.-+++.+.|. .||..++.+.+.+| + ++|++.=|=|.
T Consensus 113 -~~---l~~~f~~ia~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a-~~pnivgiK~s 163 (292)
T 2ojp_A 113 -EG---LYQHFKAIAEHTDLPQILYNVPS-RTGCDLLPETVGRL---A-KVKNIIGIXEA 163 (292)
T ss_dssp -HH---HHHHHHHHHTTCSSCEEEECCHH-HHSCCCCHHHHHHH---H-TSTTEEEC-CC
T ss_pred -HH---HHHHHHHHHHhcCCCEEEEeCcc-hhccCCCHHHHHHH---H-cCCCEEEEeCC
Confidence 00 11112221111 23355566665 48999996665555 4 35676656553
No 416
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=27.89 E-value=98 Score=21.96 Aligned_cols=30 Identities=20% Similarity=0.117 Sum_probs=25.6
Q ss_pred CcEEEEeec-CHHHHHHHHHHHHHHHHhhCC
Q 012095 438 TCIRISYAA-SLTTLQAAVERIKKGLLTLRP 467 (471)
Q Consensus 438 ~~iRis~~~-~~e~i~~~~~~l~~~l~~~~~ 467 (471)
..+|||+.. +..+-+++...|-+++.++.+
T Consensus 46 krvrisitartkkeaekfaailikvfaelgy 76 (106)
T 1qys_A 46 KRVRISITARTKKEAEKFAAILIKVFAELGY 76 (106)
T ss_dssp SEEEEEEECSSHHHHHHHHHHHHHHHHHTTC
T ss_pred cEEEEEEEecchhHHHHHHHHHHHHHHHhCC
Confidence 468999998 888999999999988888764
No 417
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=27.70 E-value=2.6e+02 Score=24.79 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=46.7
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcC--CEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIAD--ATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G--~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
..++||.|+...=..+.+.|++.|-.|++..-.-...... ++..| .++..+..|. -|.+.+++++..
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-----SNEEDILSMFSAIRS 107 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-----TCHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecC-----CCHHHHHHHHHHHHH
Confidence 4566665554444556677778887777643221111111 22223 4566666543 266666665542
Q ss_pred ---CCcEEEEcCCCCCccc--CCCHHHHHHHHH
Q 012095 228 ---KSRLLILCSPSNPTGS--VYPKNLLDEIAR 255 (471)
Q Consensus 228 ---~~~~i~i~~p~NPtG~--~~~~~~l~~i~~ 255 (471)
+..+++-+....+.+. ..+.++++++.+
T Consensus 108 ~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 140 (279)
T 1xg5_A 108 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFN 140 (279)
T ss_dssp HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4555544333222222 235566555443
No 418
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=27.65 E-value=3.7e+02 Score=24.84 Aligned_cols=39 Identities=15% Similarity=0.220 Sum_probs=21.9
Q ss_pred CcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 229 SRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 229 ~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
.-+++.+.|..-+|..++.+.+ .++++++|++.=|=|..
T Consensus 140 lPiilYn~P~~t~g~~l~~~~~---~~La~~~pnIvgiKdss 178 (318)
T 3qfe_A 140 LPVVIYNFPGVCNGIDLDSDMI---TTIARKNPNVVGVKLTC 178 (318)
T ss_dssp SCEEEEECCC----CCCCHHHH---HHHHHHCTTEEEEEESS
T ss_pred CCEEEEeCCcccCCCCCCHHHH---HHHHhhCCCEEEEEeCC
Confidence 3455666676545899995544 45555566776666654
No 419
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=27.56 E-value=2.3e+02 Score=24.28 Aligned_cols=94 Identities=12% Similarity=0.086 Sum_probs=45.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChHHH---HHHcCCEEEE-ecCCCCCCCcCCHHHHHhhhcc----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPEM---ARIADATPVI-LPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~~---~~~~G~~~~~-v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
.++||.|+...=..+.+.|++.|..|++. .-.-...... ++..|.++.. +..|. -|.+.+++.+..
T Consensus 3 ~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL-----LEAEAATALVHQAAEV 77 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCT-----TSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccC-----CCHHHHHHHHHHHHHh
Confidence 35666554444455667788888777764 3221111111 2223544444 55432 256666665532
Q ss_pred --CCcEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 228 --KSRLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 228 --~~~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
+..+++.+....+.+ ...+.+++++..+
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLE 109 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 455555433322222 2345565555443
No 420
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=27.14 E-value=2.5e+02 Score=24.77 Aligned_cols=95 Identities=15% Similarity=0.029 Sum_probs=47.3
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-hHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-YPE---MARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...=..+.+.|++.|-.|++..-.-.. ... .....+.++..+.+|- -|.+.+++.+..
T Consensus 27 ~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV-----ADFESCERCAEKVLADF 101 (269)
T ss_dssp EEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCT-----TCHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecC-----CCHHHHHHHHHHHHHHc
Confidence 44555444443355677788889777664321111 111 1223455666666643 256666655532
Q ss_pred -CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++.+......+ ...+.++++++.+.
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 133 (269)
T 3gk3_A 102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRT 133 (269)
T ss_dssp SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCcchhhCCHHHHHHHHHH
Confidence 455554333322222 23466666665543
No 421
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=26.70 E-value=3.3e+02 Score=24.20 Aligned_cols=95 Identities=11% Similarity=0.068 Sum_probs=48.8
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCC-h---HHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVS-Y---PEMARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~---~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|.+.|-.|++..-.-.. . ...++..|.++..+..|- -|.+.+++.+..
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV-----GVVEDIVRMFEEAVKI 104 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCT-----TCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCC-----CCHHHHHHHHHHHHHH
Confidence 455665554444456677777888777764322111 1 112334566777776653 255666555432
Q ss_pred --CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 --KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 --~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+..++ +++.. ...+ ...+.++++++.++
T Consensus 105 ~g~iD~l-v~~Ag~~~~~~~~~~~~~~~~~~~~~ 137 (283)
T 1g0o_A 105 FGKLDIV-CSNSGVVSFGHVKDVTPEEFDRVFTI 137 (283)
T ss_dssp HSCCCEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCcCCCCCcccCCHHHHHHHHHH
Confidence 34444 44432 2222 13466777666653
No 422
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=26.68 E-value=1.4e+02 Score=27.56 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=31.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
...|+..+++..+...+..+- ..| -.|++|.-.-..-...++.+|++++.++
T Consensus 54 ~~~vv~~ssGN~g~alA~~a~-~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~ 107 (318)
T 2rkb_A 54 CRHLVCSSGGNAGIAAAYAAR-KLGIPATIVLPESTSLQVVQRLQGEGAEVQLTG 107 (318)
T ss_dssp CCEEEECCCSHHHHHHHHHHH-HHTCCEEEEECTTCCHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCchHHHHHHHHHH-HcCCCEEEEECCCCcHHHHHHHHhcCCEEEEEC
Confidence 346666677777776554432 233 3455554432233456789999998876
No 423
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=26.44 E-value=3.9e+02 Score=24.67 Aligned_cols=106 Identities=13% Similarity=0.183 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHH--HHHHcCCEEEEecC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPT 208 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~G~~~~~v~~ 208 (471)
.+=|+.+.+...+..+- .--|++..| ..+++..+-.+ .+-| |.|++..|+|....+ +.+
T Consensus 74 ~~Er~~v~~~~v~~~~g---rvpViaGvg~~st~~ai~la~~A-~~~Gadavlv~~P~y~~~~~~~l~~----------- 138 (315)
T 3si9_A 74 HEEHKRIIELCVEQVAK---RVPVVAGAGSNSTSEAVELAKHA-EKAGADAVLVVTPYYNRPNQRGLYT----------- 138 (315)
T ss_dssp HHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-----------
Confidence 34444455544433221 124666554 55555544333 3445 899998998853210 000
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
-.+.+.++. +.-+++.+.|.. ||..++.+. +.++++++|++.=|=|.
T Consensus 139 --------~f~~va~a~--~lPiilYn~P~~-tg~~l~~~~---~~~La~~~pnIvgiKds 185 (315)
T 3si9_A 139 --------HFSSIAKAI--SIPIIIYNIPSR-SVIDMAVET---MRDLCRDFKNIIGVKDA 185 (315)
T ss_dssp --------HHHHHHHHC--SSCEEEEECHHH-HSCCCCHHH---HHHHHHHCTTEEEEEEC
T ss_pred --------HHHHHHHcC--CCCEEEEeCchh-hCCCCCHHH---HHHHHhhCCCEEEEEeC
Confidence 012222221 334555666653 789999554 44555556677666654
No 424
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=26.22 E-value=3.7e+02 Score=24.40 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=20.4
Q ss_pred cEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCC
Q 012095 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWV 190 (471)
Q Consensus 157 ~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~ 190 (471)
-|++..|+ .+++..+-.+ .+-| |.|++..|+|.
T Consensus 75 pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~ 111 (293)
T 1f6k_A 75 ALIAQVGSVNLKEAVELGKYA-TELGYDCLSAVTPFYY 111 (293)
T ss_dssp EEEEECCCSCHHHHHHHHHHH-HHHTCSEEEEECCCSS
T ss_pred eEEEecCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCC
Confidence 46666554 5666544333 2335 88998888884
No 425
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=26.03 E-value=1.8e+02 Score=25.46 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=47.1
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------CCc
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------KSR 230 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~~ 230 (471)
.++||.|+...=..+.+.|.+.|..|++.+-.-.......... .+...+..|- -|.+.+++.+.. +..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~Dv-----~~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDV-----ADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCT-----TSHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-ccCCeEEeeC-----CCHHHHHHHHHHHHHHcCCCC
Confidence 4566666555445667778888988776543221122222222 2333454432 266666665542 445
Q ss_pred EEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 231 LLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 231 ~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
.++-+....+.+ ...+.++++++.++
T Consensus 78 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 444333222222 24566777766554
No 426
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=25.83 E-value=2.6e+02 Score=24.59 Aligned_cols=91 Identities=12% Similarity=0.001 Sum_probs=44.9
Q ss_pred EEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEc
Q 012095 158 ILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILC 235 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~ 235 (471)
|++|.|+...-..++..|++. |..|.+..-.-..... ....+.+++..++ -|.+.+++++. +..+|+.+
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~-------~d~~~~~~~~~-~~d~vi~~ 72 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAAQGITVRQADY-------GDEAALTSALQ-GVEKLLLI 72 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhcCCCeEEEcCC-------CCHHHHHHHHh-CCCEEEEe
Confidence 566654333334466677765 7665543221112222 2234566554433 27788888875 45666654
Q ss_pred CCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 236 SPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 236 ~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
...++... ..-.+.+++.|++.
T Consensus 73 a~~~~~~~---~~~~~~l~~a~~~~ 94 (286)
T 2zcu_A 73 SSSEVGQR---APQHRNVINAAKAA 94 (286)
T ss_dssp C-----------CHHHHHHHHHHHH
T ss_pred CCCCchHH---HHHHHHHHHHHHHc
Confidence 43222111 12356777888775
No 427
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=25.82 E-value=2.7e+02 Score=25.55 Aligned_cols=108 Identities=13% Similarity=0.146 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChHHHHHHcCCEEEEecCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYPEMARIADATPVILPTRI 210 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~ 210 (471)
.+=|+.+.+...+..+- .--|++..|+ .+++..+-.+ .+-| |.|++..|+|....+
T Consensus 64 ~eEr~~vi~~~~~~~~g---rvpViaGvg~~st~~ai~la~~A-~~~Gadavlv~~P~y~~~s~---------------- 123 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQA-EKLGANGVLVVTPYYNKPTQ---------------- 123 (306)
T ss_dssp HHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHH-HHHTCSEEEEECCCSSCCCH----------------
T ss_pred HHHHHHHHHHHHHHhCC---CCeEEEcCCCccHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCH----------------
Confidence 34444444444433221 1236666554 5666544333 2334 889988888743210
Q ss_pred CCCCcCCHHHHHhhhcc-CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 211 SENFLLDPKVLESKLTE-KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 211 ~~~~~ld~e~l~~~l~~-~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
++ -.+.+++.... +.-+++.+.|. .||..++.+.+.+| ++++|++.=|=|..
T Consensus 124 -~~---l~~~f~~va~a~~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiKdss 176 (306)
T 1o5k_A 124 -EG---LYQHYKYISERTDLGIVVYNVPG-RTGVNVLPETAARI---AADLKNVVGIXEAN 176 (306)
T ss_dssp -HH---HHHHHHHHHTTCSSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECC
T ss_pred -HH---HHHHHHHHHHhCCCCEEEEeCcc-ccCcCCCHHHHHHH---HHhCCCEEEEeCCC
Confidence 00 11112221111 23355566665 48889996655544 43466776666644
No 428
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=25.69 E-value=3.3e+02 Score=23.63 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=45.1
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
+...++||.|+...=..+.+.|.+.|..|++.+-.-.. +..|... +..|. -|.+.+++++..
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~--~~~D~-----~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFAT--EVMDV-----ADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEE--EECCT-----TCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceE--EEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 33456666555544455677777888777654322110 1123333 33332 266666666542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+...++-+....+.+ ...+.+++++..++
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 104 (250)
T 2fwm_X 74 RLDALVNAAGILRMGATDQLSKEDWQQTFAV 104 (250)
T ss_dssp CCCEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 445444333222222 23466777766553
No 429
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=25.68 E-value=2.2e+02 Score=25.96 Aligned_cols=50 Identities=10% Similarity=0.130 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVS 191 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~ 191 (471)
.+=|..+.+...+. ... |++..|+ .+++..+-. .-+-| |.|++..|+|..
T Consensus 51 ~eEr~~v~~~~~~~-----~~g-ViaGvg~~~t~~ai~la~~-A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV-----THK-LIFQVGSLNLNDVMELVKF-SNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTT-----CSC-EEEECCCSCHHHHHHHHHH-HHTSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHH-----hCC-eEEeeCCCCHHHHHHHHHH-HHhcCCCEEEEcCCcCCC
Confidence 44455555555321 112 7776664 566664433 34556 999999998854
No 430
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=25.49 E-value=2.5e+02 Score=23.97 Aligned_cols=92 Identities=11% Similarity=0.022 Sum_probs=43.4
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHc-CCEEEEecCCCCCCCcCCHHHHHhhhcc------CC
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTE------KS 229 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~ld~e~l~~~l~~------~~ 229 (471)
.+++|.|+...-..+.+.|++.|..|++..-.-.......... +... +..|. -|.+.+++.+.. +.
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~D~-----~~~~~~~~~~~~~~~~~~~i 79 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP--LPGDV-----REEGDWARAVAAMEEAFGEL 79 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEE--EECCT-----TCHHHHHHHHHHHHHHHSCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceE--EEecC-----CCHHHHHHHHHHHHHHcCCC
Confidence 4666655544445566677788877766432211122222222 3443 33332 256666655532 44
Q ss_pred cEEEEcCCCCCcc--cCCCHHHHHHHHH
Q 012095 230 RLLILCSPSNPTG--SVYPKNLLDEIAR 255 (471)
Q Consensus 230 ~~i~i~~p~NPtG--~~~~~~~l~~i~~ 255 (471)
..++-+....+.+ ...+.+++++..+
T Consensus 80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~ 107 (234)
T 2ehd_A 80 SALVNNAGVGVMKPVHELTLEEWRLVLD 107 (234)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 5554333222222 2346566655544
No 431
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=25.46 E-value=1.5e+02 Score=27.63 Aligned_cols=75 Identities=17% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCHHHHHHHHHHHHH-HhCCCCCC-CcE-EEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 133 GTLELRSAICHKLKE-ENGLSYTP-DQI-LVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 133 G~~~lr~~ia~~~~~-~~g~~~~~-~~i-~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
|....|.+....... ..|. +.+ ..+ +..+++..+...+..+- +.-.-.|++|+..-..-...++.+|++++.++.
T Consensus 48 GSfK~R~a~~~i~~a~~~g~-l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 126 (334)
T 3tbh_A 48 ASVKDRLGFAIYDKAEKEGK-LIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPA 126 (334)
T ss_dssp SBTHHHHHHHHHHHHHHTTS-CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred cCcHHHHHHHHHHHHHHcCC-CCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 555665544332221 2231 233 343 55566777766555443 222234666665433445678999999999874
No 432
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=25.38 E-value=2.2e+02 Score=27.76 Aligned_cols=52 Identities=13% Similarity=0.010 Sum_probs=34.3
Q ss_pred cEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 157 QILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|+..+++..++..+..+- +.-.-.|++|.-.-..-...++.+|++++.++-
T Consensus 162 ~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~ 214 (442)
T 3ss7_X 162 SIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQ 214 (442)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 5777788888887665543 222245666664333345678899999998873
No 433
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=25.13 E-value=1.6e+02 Score=28.76 Aligned_cols=107 Identities=14% Similarity=0.135 Sum_probs=54.4
Q ss_pred CCCHHHHHHHHHHHHH-HhCCCCCC--CcEEEeCChHHHHHHHHHHh-cCCCCeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 132 AGTLELRSAICHKLKE-ENGLSYTP--DQILVSNGAKQSILQAVLAV-CSPGDEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~-~~g~~~~~--~~i~it~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
.|....|.+....... ..|. +.+ ..|+..+++..+...+..+- +.-.-.|++|+..-..-...++.+|++++.++
T Consensus 150 tGSfKdRgA~~~i~~A~~~G~-l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~ 228 (430)
T 4aec_A 150 CCSVKDRIGYSMVTDAEQKGF-ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTD 228 (430)
T ss_dssp TSBTTHHHHHHHHHHHHHTTS-CCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHcCC-CCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEEC
Confidence 3555666554433322 2342 233 34566667777776655543 22223566666543444567899999999886
Q ss_pred CCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCc
Q 012095 208 TRISENFLLDPKVLESKLTEKSRLLILCSPSNPT 241 (471)
Q Consensus 208 ~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPt 241 (471)
.. .++.--.+..++...+....++++...||.
T Consensus 229 ~~--~~~~~a~~~a~el~~~~~~~~~i~~~~np~ 260 (430)
T 4aec_A 229 PA--KGMTGAVQKAEEILKNTPDAYMLQQFDNPA 260 (430)
T ss_dssp GG--GHHHHHHHHHHHHHHHSTTEEECCTTTCTH
T ss_pred CC--CChHHHHHHHHHHHHhcCCcEEecCCCCcc
Confidence 42 111101122223333344566654445654
No 434
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=24.92 E-value=2.9e+02 Score=24.37 Aligned_cols=95 Identities=11% Similarity=0.091 Sum_probs=48.9
Q ss_pred cEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChH---HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-----
Q 012095 157 QILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYP---EMARIADATPVILPTRISENFLLDPKVLESKLTE----- 227 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~---~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~----- 227 (471)
.++||.|+...=..+.+.|++.|-.|++. .-.-.... ..+...+.++..+..|.. |.+.+++.+..
T Consensus 28 ~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~~ 102 (272)
T 4e3z_A 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG-----NAADIAAMFSAVDRQF 102 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHhC
Confidence 34555444443355667778889877553 32211111 223445778888877542 56666655532
Q ss_pred -CCcEEEEcCCCCCc-c--cCCCHHHHHHHHHH
Q 012095 228 -KSRLLILCSPSNPT-G--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 -~~~~i~i~~p~NPt-G--~~~~~~~l~~i~~l 256 (471)
+..+++.+...... + ...+.+++++..+.
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~ 135 (272)
T 4e3z_A 103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135 (272)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhh
Confidence 34544433222211 2 23466777666553
No 435
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=24.80 E-value=1.1e+02 Score=27.84 Aligned_cols=16 Identities=6% Similarity=-0.043 Sum_probs=11.7
Q ss_pred HHHHHcCCEEEEecCC
Q 012095 194 EMARIADATPVILPTR 209 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~ 209 (471)
..++..|++.+.+|+.
T Consensus 38 ~~i~~~G~N~VRi~~~ 53 (294)
T 2whl_A 38 PAIAEQGANTIRIVLS 53 (294)
T ss_dssp HHHHHTTCSEEEEEEC
T ss_pred HHHHHcCCCEEEEEec
Confidence 4556788888888874
No 436
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=24.56 E-value=3e+02 Score=24.25 Aligned_cols=96 Identities=8% Similarity=-0.037 Sum_probs=48.7
Q ss_pred cEEEeCChHHHHHHHHHHhcCC--CCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEE
Q 012095 157 QILVSNGAKQSILQAVLAVCSP--GDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLIL 234 (471)
Q Consensus 157 ~i~it~G~~~al~~~~~~l~~~--gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i 234 (471)
.|++|.|+...-..++..|++. |..|.+..-.-.... .....+.+++..++ -|.+.+.+++. +...|+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~l~~~~~~~~~~D~-------~d~~~l~~~~~-~~d~vi~ 72 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-TLADQGVEVRHGDY-------NQPESLQKAFA-GVSKLLF 72 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH-HHHHTTCEEEECCT-------TCHHHHHHHTT-TCSEEEE
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh-HHhhcCCeEEEecc-------CCHHHHHHHHh-cCCEEEE
Confidence 3566654333334466677776 765554322212222 22234666554433 27788888876 4666665
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
+...++. ......-...+++.|++. ++
T Consensus 73 ~a~~~~~-~~~n~~~~~~l~~a~~~~-~~ 99 (287)
T 2jl1_A 73 ISGPHYD-NTLLIVQHANVVKAARDA-GV 99 (287)
T ss_dssp CCCCCSC-HHHHHHHHHHHHHHHHHT-TC
T ss_pred cCCCCcC-chHHHHHHHHHHHHHHHc-CC
Confidence 4433221 000122346778888876 53
No 437
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=24.30 E-value=1.7e+02 Score=27.03 Aligned_cols=92 Identities=10% Similarity=-0.021 Sum_probs=51.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEE-EcCCCCCChH--H---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc-C
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVI-IPAPFWVSYP--E---MARIADATPVILPTRISENFLLDPKVLESKLTE-K 228 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vl-v~~p~y~~~~--~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~-~ 228 (471)
..|+||.|+-..-..++..|++.|..|. +....-..-. . .....|++++..++ -|.+.+.+++.+ +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~~ 83 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEHE 83 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHTT
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhCC
Confidence 4677776533333445666766675544 3333211111 1 22345777665544 278888888863 5
Q ss_pred CcEEEEcCC-CCCcccCCCHHHHHHHHHHHHhCCC
Q 012095 229 SRLLILCSP-SNPTGSVYPKNLLDEIARIVAKHPR 262 (471)
Q Consensus 229 ~~~i~i~~p-~NPtG~~~~~~~l~~i~~l~~~~~~ 262 (471)
..+|+.+.. .|..| -..+++.|++. +
T Consensus 84 ~d~Vi~~a~~~n~~~-------~~~l~~aa~~~-g 110 (346)
T 3i6i_A 84 IDIVVSTVGGESILD-------QIALVKAMKAV-G 110 (346)
T ss_dssp CCEEEECCCGGGGGG-------HHHHHHHHHHH-C
T ss_pred CCEEEECCchhhHHH-------HHHHHHHHHHc-C
Confidence 666665433 34333 35788888877 5
No 438
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=24.17 E-value=2.1e+02 Score=25.30 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=47.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|++.|..|++.+-.-.. ....++..+..|- -|.+.+++.+..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP------SADPDIHTVAGDI-----SKPETADRIVREGIERFG 95 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC------CSSTTEEEEESCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh------cccCceEEEEccC-----CCHHHHHHHHHHHHHHCC
Confidence 33456666555544456677788889877765432211 1112455555542 266666665542
Q ss_pred CCcEEEEcCCCCCcc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSNPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG--~~~~~~~l~~i~~l 256 (471)
+..+++-+....+.+ ...+.++++++.++
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 126 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGV 126 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 455554333322222 24577777766553
No 439
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.94 E-value=67 Score=32.01 Aligned_cols=72 Identities=10% Similarity=0.091 Sum_probs=47.9
Q ss_pred cCCCCCChHHHHHHc-CCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 185 PAPFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 185 ~~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
.-|.|..|..+.+.- ..++..+-+... .-++.++++.....++|++ +-+- +.+..+++.++|+++ ++
T Consensus 20 ~~Pv~~~~~~~~~~p~~~DlavI~vPa~----~v~~~v~e~~~~Gv~~vii-s~Gf------~~~~~~~l~~~A~~~-g~ 87 (480)
T 3dmy_A 20 ALTQVRRWDSACQKLPDANLALISVAGE----YAAELANQALDRNLNVMMF-SDNV------TLEDEIQLKTRAREK-GL 87 (480)
T ss_dssp CCEEESSHHHHHHHSTTCCEEEECSCHH----HHHHHHHHHHHTTCEEEEC-CCCC------CHHHHHHHHHHHHHT-TC
T ss_pred CCcccchHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHhcCCCEEEE-CCCC------CHHHHHHHHHHHHHc-CC
Confidence 356788888887764 455444443321 3667788888778884443 3222 266778999999999 99
Q ss_pred EEEEc
Q 012095 264 LVLSD 268 (471)
Q Consensus 264 ~ii~D 268 (471)
.||==
T Consensus 88 rliGP 92 (480)
T 3dmy_A 88 LVMGP 92 (480)
T ss_dssp CEECS
T ss_pred EEEec
Confidence 88833
No 440
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.86 E-value=2.8e+02 Score=24.23 Aligned_cols=48 Identities=10% Similarity=-0.004 Sum_probs=22.8
Q ss_pred cEEEe-CChHHHHHHHHHHhcC-CCCeEEEcCCCCCChHHHH-HHcCCEEEEecC
Q 012095 157 QILVS-NGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEMA-RIADATPVILPT 208 (471)
Q Consensus 157 ~i~it-~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~~~-~~~G~~~~~v~~ 208 (471)
+|.+. .+..+++..+-. +.+ .|..|++....- ...+ +..+..++.+++
T Consensus 40 ~I~vi~~~le~av~~a~~-~~~~~~~dVIISRGgt---a~~Lr~~~~iPVV~I~v 90 (225)
T 2pju_A 40 NITPIQLGFEKAVTYIRK-KLANERCDAIIAAGSN---GAYLKSRLSVPVILIKP 90 (225)
T ss_dssp EEEEECCCHHHHHHHHHH-HTTTSCCSEEEEEHHH---HHHHHTTCSSCEEEECC
T ss_pred eEEEecCcHHHHHHHHHH-HHhcCCCeEEEeCChH---HHHHHhhCCCCEEEecC
Confidence 34443 334556654433 333 344466655432 2222 334666777765
No 441
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=23.43 E-value=1.6e+02 Score=27.89 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=31.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCC-CCCChHHHHHHcCCEEEEecC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAP-FWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p-~y~~~~~~~~~~G~~~~~v~~ 208 (471)
..|+..+++..+...+..+- ..| -.|++|+. .-..-...++.+|++++.++-
T Consensus 86 ~~vv~aSsGN~g~alA~~a~-~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~ 140 (360)
T 2d1f_A 86 RAVLCASTGNTSASAAAYAA-RAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDG 140 (360)
T ss_dssp SEEEECCSSHHHHHHHHHHH-HHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSS
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECC
Confidence 46666677777766554432 234 24555553 222344678999999988863
No 442
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=23.26 E-value=4.2e+02 Score=24.03 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVS 191 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~ 191 (471)
.+=|+.+.+...+..+ ..--|++..|+ .+++..+-.+ -+-| |.|++..|+|..
T Consensus 55 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~ 111 (294)
T 3b4u_A 55 SRERQAILSSFIAAGI---APSRIVTGVLVDSIEDAADQSAEA-LNAGARNILLAPPSYFK 111 (294)
T ss_dssp HHHHHHHHHHHHHTTC---CGGGEEEEECCSSHHHHHHHHHHH-HHTTCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCccHHHHHHHHHHH-HhcCCCEEEEcCCcCCC
Confidence 3444555555443222 11236665554 6666644433 3445 899999998854
No 443
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=23.03 E-value=84 Score=27.24 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=26.1
Q ss_pred CCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 012095 228 KSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLS 267 (471)
Q Consensus 228 ~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~ 267 (471)
.+.+++..-..|+.|..+. +.++.+++++| ++.+|.
T Consensus 159 ~Pa~vicEi~~~~dG~mar---~~~l~~fA~~h-~l~iit 194 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMR---LDDCIQFGKKH-GIKIIN 194 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCB---HHHHHHHHHHH-TCCEEE
T ss_pred CceEEEEEEeECCCCCcCC---HHHHHHHHHHc-CCcEEE
Confidence 4555543333488899999 77788899999 888774
No 444
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=22.83 E-value=4.3e+02 Score=23.94 Aligned_cols=107 Identities=13% Similarity=0.187 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPT 208 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~ 208 (471)
.+=|..+.+...+..+- .--|++..|+ .+++..+-.+ .+-| |.|++..|+|.... .+.+
T Consensus 52 ~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~----------- 116 (292)
T 2vc6_A 52 KSEHEQVVEITIKTANG---RVPVIAGAGSNSTAEAIAFVRHA-QNAGADGVLIVSPYYNKPTQEGIYQ----------- 116 (292)
T ss_dssp HHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHH-HHcCCCEEEEcCCCCCCCCHHHHHH-----------
Confidence 34444454444433221 1236666554 5666544433 3445 89999899884311 1111
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
-...+.++. +.-+++.+.|. .||..++.+.+.+| ++++|++.=|=|..
T Consensus 117 --------~f~~ia~a~--~lPiilYn~P~-~tg~~l~~~~~~~L---a~~~pnIvgiK~s~ 164 (292)
T 2vc6_A 117 --------HFKAIDAAS--TIPIIVYNIPG-RSAIEIHVETLARI---FEDCPNVKGVXDAT 164 (292)
T ss_dssp --------HHHHHHHHC--SSCEEEEECHH-HHSCCCCHHHHHHH---HHHCTTEEEEEECS
T ss_pred --------HHHHHHHhC--CCCEEEEeCcc-ccCcCCCHHHHHHH---HhhCCCEEEEecCC
Confidence 011222221 23355556665 38888996555444 44466776666644
No 445
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.73 E-value=3.5e+02 Score=22.92 Aligned_cols=89 Identities=8% Similarity=0.020 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCcE-EEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHH-HHcCCEEEEecCCCC
Q 012095 134 TLELRSAICHKLKEENGLSYTPDQI-LVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMA-RIADATPVILPTRIS 211 (471)
Q Consensus 134 ~~~lr~~ia~~~~~~~g~~~~~~~i-~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~-~~~G~~~~~v~~~~~ 211 (471)
+++|++.+.+... .++. ++ +...+-.+++..+- .+ +.|..|++....- ...+ +..+..++.+++..
T Consensus 13 y~~l~~~~~~i~~-e~~~-----~i~i~~~~l~~~v~~a~-~~-~~~~dVIISRGgt---a~~lr~~~~iPVV~I~~s~- 80 (196)
T 2q5c_A 13 NENLLNLFPKLAL-EKNF-----IPITKTASLTRASKIAF-GL-QDEVDAIISRGAT---SDYIKKSVSIPSISIKVTR- 80 (196)
T ss_dssp CHHHHHHHHHHHH-HHTC-----EEEEEECCHHHHHHHHH-HH-TTTCSEEEEEHHH---HHHHHTTCSSCEEEECCCH-
T ss_pred cHHHHHHHHHHHh-hhCC-----ceEEEECCHHHHHHHHH-Hh-cCCCeEEEECChH---HHHHHHhCCCCEEEEcCCH-
Confidence 3566665544443 3332 33 34445666776544 45 6675677766432 2222 33567777777531
Q ss_pred CCCcCC-HHHHHhhhccCCcEEEEcCCC
Q 012095 212 ENFLLD-PKVLESKLTEKSRLLILCSPS 238 (471)
Q Consensus 212 ~~~~ld-~e~l~~~l~~~~~~i~i~~p~ 238 (471)
.| +..|..+-+...+.-++..++
T Consensus 81 ----~Dil~al~~a~~~~~kIavvg~~~ 104 (196)
T 2q5c_A 81 ----FDTMRAVYNAKRFGNELALIAYKH 104 (196)
T ss_dssp ----HHHHHHHHHHGGGCSEEEEEEESS
T ss_pred ----hHHHHHHHHHHhhCCcEEEEeCcc
Confidence 12 233333333344545555444
No 446
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=22.69 E-value=3.5e+02 Score=22.89 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=50.7
Q ss_pred EEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCC
Q 012095 158 ILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSP 237 (471)
Q Consensus 158 i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p 237 (471)
|++..++.-+.. +...|.+.|..|++-+..........+..|..++.-.. .+.+.++++--++..+++++.+
T Consensus 3 iiIiG~G~~G~~-la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~-------~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 3 VIIIGGETTAYY-LARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDG-------SHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp EEEECCHHHHHH-HHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCT-------TSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEECCCHHHHH-HHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCC-------CCHHHHHhcCcccCCEEEEecC
Confidence 555555555555 45566667766665554332233334445766543221 3777787764456777877655
Q ss_pred CCCcccCCCHHHHHHHHHHHHh-CCCeEEE
Q 012095 238 SNPTGSVYPKNLLDEIARIVAK-HPRLLVL 266 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~-~~~~~ii 266 (471)
+ .+.-..++..+++ ++...+|
T Consensus 75 ~--------d~~n~~~~~~a~~~~~~~~ii 96 (218)
T 3l4b_C 75 R--------DEVNLFIAQLVMKDFGVKRVV 96 (218)
T ss_dssp C--------HHHHHHHHHHHHHTSCCCEEE
T ss_pred C--------cHHHHHHHHHHHHHcCCCeEE
Confidence 4 2334456666665 4334444
No 447
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=22.68 E-value=4.3e+02 Score=23.93 Aligned_cols=25 Identities=8% Similarity=0.093 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 245 YPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 245 ~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
.+.++.++|.+.++++ ++.+.+-..
T Consensus 100 ~~~~~~~~l~~~a~~~-g~~~~~~~~ 124 (319)
T 1tlt_A 100 ENLRDAERLVELAARK-KLTLMVGFN 124 (319)
T ss_dssp SSHHHHHHHHHHHHHT-TCCEEEECG
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEeee
Confidence 4678889999999998 777765433
No 448
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=22.62 E-value=3.8e+02 Score=23.26 Aligned_cols=98 Identities=10% Similarity=0.068 Sum_probs=48.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHH----HcCCEEEEecCCCCCCCcCCHHHHHhhhcc---
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMAR----IADATPVILPTRISENFLLDPKVLESKLTE--- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~----~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~--- 227 (471)
...++||.|+...=..+.+.|.+.|..|++.+-.-........ ..+.++..+..+... -|.+.+++.+..
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT---CTSENCQQLAQRIAV 88 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTT---CCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEeccc---CCHHHHHHHHHHHHH
Confidence 3456666655554456677788888877765433222222221 122244445544322 255655555432
Q ss_pred ---CCcEEEEcCCC--CCcc--cCCCHHHHHHHHHH
Q 012095 228 ---KSRLLILCSPS--NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ---~~~~i~i~~p~--NPtG--~~~~~~~l~~i~~l 256 (471)
+...++ +|.. .+.+ ...+.++++++.++
T Consensus 89 ~~g~id~lv-~nAg~~~~~~~~~~~~~~~~~~~~~~ 123 (252)
T 3f1l_A 89 NYPRLDGVL-HNAGLLGDVCPMSEQNPQVWQDVMQV 123 (252)
T ss_dssp HCSCCSEEE-ECCCCCCCCSCTTTCCHHHHHHHHHH
T ss_pred hCCCCCEEE-ECCccCCCCCCcccCCHHHHHHHHhh
Confidence 344444 4432 2222 23567777766654
No 449
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=22.57 E-value=1.4e+02 Score=28.49 Aligned_cols=51 Identities=16% Similarity=0.148 Sum_probs=31.6
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEec
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILP 207 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~ 207 (471)
..|+..+++..+..++..+- ..| -.|++|.-.-..-...++.+|++++.++
T Consensus 94 ~~vv~aSsGN~g~alA~aa~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 146 (372)
T 1p5j_A 94 AHFVCSSAGNAGMAAAYAAR-QLGVPATIVVPGTTPALTIERLKNEGATCKVVG 146 (372)
T ss_dssp CEEEECCSSHHHHHHHHHHH-HHTCCEEEEECTTCCHHHHHHHHHTTCEEEECC
T ss_pred CEEEEeCCCHHHHHHHHHHH-HcCCcEEEEECCCCCHHHHHHHHhcCCEEEEEC
Confidence 45666677777777655442 223 3455555432334467889999998876
No 450
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=22.53 E-value=1.2e+02 Score=29.01 Aligned_cols=69 Identities=12% Similarity=0.190 Sum_probs=43.4
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCC----cEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLTEKS----RLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~----~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
+.+..++.++...-+..+.+|.+..+.+-+. ...+ +..+ . ...+.|-.+|++++++|++.|+++ ++-||
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~-~~~~~~~~~g~~-~-~~~~~~g~YT~~di~eiv~YA~~r-gI~VI 112 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQR-AENAVQGKDGIY-I-NPYTGKPFLSYRQLDDIKAYAKAK-GIELI 112 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBC-GGGSEECTTSCE-E-CTTTCCEEBCHHHHHHHHHHHHHT-TCEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhh-hhhhccccCCCc-C-CCCCCCCCcCHHHHHHHHHHHHHc-CCEEE
Confidence 4566778888888777666777764432211 1100 0011 0 112234579999999999999999 88888
No 451
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=22.36 E-value=1.1e+02 Score=27.87 Aligned_cols=91 Identities=11% Similarity=0.008 Sum_probs=52.9
Q ss_pred EEeCChHHHHHHHHHHhcCCCCeEEEcCCC--CCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc--cCCcEEEE
Q 012095 159 LVSNGAKQSILQAVLAVCSPGDEVIIPAPF--WVSYPEMARIADATPVILPTRISENFLLDPKVLESKLT--EKSRLLIL 234 (471)
Q Consensus 159 ~it~G~~~al~~~~~~l~~~gd~Vlv~~p~--y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~--~~~~~i~i 234 (471)
+...+..++|...+.....+|..|+++.+. -....+.++..|+++..+++.....-..+.+.+.+.+. ....+|++
T Consensus 137 ~p~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~l~~~~~~d~v~f 216 (286)
T 1jr2_A 137 GETCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITF 216 (286)
T ss_dssp CCSCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEECTTHHHHHHHHHHHHCSCSEEEE
T ss_pred CCCccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEeeCCCcHHHHHHHHHhCCCCCEEEE
Confidence 334566777765555433467888887654 34566778889999988887532110012235555554 24567776
Q ss_pred cCCCCCcccCCCHHHHHHHHHHHHh
Q 012095 235 CSPSNPTGSVYPKNLLDEIARIVAK 259 (471)
Q Consensus 235 ~~p~NPtG~~~~~~~l~~i~~l~~~ 259 (471)
.+|+ -++.+.+.+.+
T Consensus 217 tS~~----------~v~~f~~~~~~ 231 (286)
T 1jr2_A 217 FSPS----------GLTYSLKHIQE 231 (286)
T ss_dssp SSHH----------HHHHHHHHHHH
T ss_pred EChH----------HHHHHHHHHhh
Confidence 5553 25555555543
No 452
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=22.27 E-value=1.1e+02 Score=24.69 Aligned_cols=44 Identities=7% Similarity=0.163 Sum_probs=28.5
Q ss_pred HHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC
Q 012095 218 PKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (471)
Q Consensus 218 ~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~ 272 (471)
.+.+++++....+.+++. + |.. -+++.+.|+++ ++.++-+.+..
T Consensus 91 ~~vv~~~~~~gi~~i~~~-~----g~~-----~~~l~~~a~~~-Gi~vvGpnc~g 134 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQ-Y----NTY-----NREASKKADEA-GLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHHTCSEEEEC-T----TCC-----CHHHHHHHHHT-TCEEEESCCHH
T ss_pred HHHHHHHHHcCCCEEEEC-C----Cch-----HHHHHHHHHHc-CCEEEcCCchh
Confidence 344455555577877653 2 222 36778899999 99988776653
No 453
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=22.11 E-value=4.5e+02 Score=23.91 Aligned_cols=87 Identities=14% Similarity=0.255 Sum_probs=47.3
Q ss_pred cEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCc
Q 012095 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (471)
Q Consensus 157 ~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~ 230 (471)
-|++..|+ .+++..+-.+ .+-| |.|++..|+|.... .+.+ -.+.+.++. +.-
T Consensus 71 pviaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 128 (297)
T 2rfg_A 71 PVIAGAGSNNPVEAVRYAQHA-QQAGADAVLCVAGYYNRPSQEGLYQ-------------------HFKMVHDAI--DIP 128 (297)
T ss_dssp CBEEECCCSSHHHHHHHHHHH-HHHTCSEEEECCCTTTCCCHHHHHH-------------------HHHHHHHHC--SSC
T ss_pred eEEEccCCCCHHHHHHHHHHH-HhcCCCEEEEcCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 36666554 5666544333 3335 89999999884311 1111 011222221 234
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
+++.+.|.. ||..++.+.+.+| + ++|++.=|=|..
T Consensus 129 iilYn~P~~-tg~~l~~~~~~~L---a-~~pnIvgiKds~ 163 (297)
T 2rfg_A 129 IIVYNIPPR-AVVDIKPETMARL---A-ALPRIVGVKDAT 163 (297)
T ss_dssp EEEEECHHH-HSCCCCHHHHHHH---H-TSTTEEEEEECS
T ss_pred EEEEeCccc-cCCCCCHHHHHHH---H-cCCCEEEEEeCC
Confidence 566677764 8999996666555 4 356766665543
No 454
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=22.03 E-value=4e+02 Score=24.20 Aligned_cols=91 Identities=12% Similarity=-0.017 Sum_probs=46.9
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEE
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTEKSRLLI 233 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~ 233 (471)
+...|+||.|+...=..++..|++.|..|++.+-.-.. .+.+++..++ -|.+.+.+++. ++.+|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl-------~d~~~~~~~~~-~~d~vi 82 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSL-------EDGQALSDAIM-GVSAVL 82 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCT-------TCHHHHHHHHT-TCSEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCc-------CCHHHHHHHHh-CCCEEE
Confidence 33467777664444455667777778666554322111 3444443332 37788888776 566666
Q ss_pred EcCC-CCCcccCCCHH-------HHHHHHHHHHhC
Q 012095 234 LCSP-SNPTGSVYPKN-------LLDEIARIVAKH 260 (471)
Q Consensus 234 i~~p-~NPtG~~~~~~-------~l~~i~~l~~~~ 260 (471)
.+.. ..++.... .+ -...+++.|+++
T Consensus 83 h~A~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~ 116 (347)
T 4id9_A 83 HLGAFMSWAPADR-DRMFAVNVEGTRRLLDAASAA 116 (347)
T ss_dssp ECCCCCCSSGGGH-HHHHHHHTHHHHHHHHHHHHT
T ss_pred ECCcccCcchhhH-HHHHHHHHHHHHHHHHHHHHc
Confidence 4433 22221111 11 125677888876
No 455
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=22.00 E-value=4.6e+02 Score=24.34 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecC
Q 012095 135 LELRSAICHKLKEENGLSYTPDQILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPT 208 (471)
Q Consensus 135 ~~lr~~ia~~~~~~~g~~~~~~~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~ 208 (471)
.+=|..+.+...+..+ ..--|++..| ..+++..+-.+ .+-| |.|++..|+|.... .+.+
T Consensus 86 ~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A-~~~Gadavlv~~P~Y~~~s~~~l~~----------- 150 (332)
T 2r8w_A 86 REERRRAIEAAATILR---GRRTLMAGIGALRTDEAVALAKDA-EAAGADALLLAPVSYTPLTQEEAYH----------- 150 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TSSEEEEEECCSSHHHHHHHHHHH-HHHTCSEEEECCCCSSCCCHHHHHH-----------
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHH-HhcCCCEEEECCCCCCCCCHHHHHH-----------
Confidence 3444444444443322 1124666555 46666644333 3345 89999999884311 0100
Q ss_pred CCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 209 RISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 209 ~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
-...+.++. +.-+++.+.|.. ||..++.+.+.+|+ ++|++.=|=|..
T Consensus 151 --------~f~~VA~a~--~lPiilYn~P~~-tg~~l~~e~~~~La----~~pnIvgiKdss 197 (332)
T 2r8w_A 151 --------HFAAVAGAT--ALPLAIYNNPTT-TRFTFSDELLVRLA----YIPNIRAIKMPL 197 (332)
T ss_dssp --------HHHHHHHHC--SSCEEEECCHHH-HCCCCCHHHHHHHH----TSTTEEEEEECC
T ss_pred --------HHHHHHHhc--CCCEEEEeCccc-cCcCCCHHHHHHHH----cCCCEEEEEeCC
Confidence 011222221 233556666654 89999966665554 356776666654
No 456
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=21.98 E-value=4.1e+02 Score=23.40 Aligned_cols=97 Identities=10% Similarity=0.108 Sum_probs=47.2
Q ss_pred CCCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc------
Q 012095 154 TPDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEMARIADATPVILPTRISENFLLDPKVLESKLTE------ 227 (471)
Q Consensus 154 ~~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~------ 227 (471)
....++||.|+...=..+.+.|.+.|..|++.+-.-........... .+..+..|- -|.+.+++.+..
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDV-----TQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCT-----TSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCC-----CCHHHHHHHHHHHHHHcC
Confidence 34456777665554456677788888777764322111122222222 244455432 256666665542
Q ss_pred CCcEEEEcCCCC-Ccc--cCCCHHHHHHHHHH
Q 012095 228 KSRLLILCSPSN-PTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ~~~~i~i~~p~N-PtG--~~~~~~~l~~i~~l 256 (471)
+...++-+.... +.+ ...+.++++++.++
T Consensus 82 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 113 (270)
T 1yde_A 82 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLEL 113 (270)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444333222 222 23466666665543
No 457
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=21.69 E-value=1.3e+02 Score=32.14 Aligned_cols=75 Identities=8% Similarity=0.158 Sum_probs=50.9
Q ss_pred CCCCCChHHHHHHc-CCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCe
Q 012095 186 APFWVSYPEMARIA-DATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRL 263 (471)
Q Consensus 186 ~p~y~~~~~~~~~~-G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~ 263 (471)
-|+|.+..++.... ++++..+-+... .-++.+++++. ...+.+++.+-+- +....++|.++|+++ ++
T Consensus 550 vp~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf------~e~~~~~l~~~A~~~-g~ 618 (829)
T 3pff_A 550 IPVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGI------PEALTRKLIKKADQK-GV 618 (829)
T ss_dssp EEEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCC------CHHHHHHHHHHHHHH-TC
T ss_pred cccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCC------CHHHHHHHHHHHHHc-CC
Confidence 58888888877653 344443333322 36788999988 7889777654433 345678899999999 99
Q ss_pred EEEEccCC
Q 012095 264 LVLSDEIY 271 (471)
Q Consensus 264 ~ii~De~y 271 (471)
.||==++.
T Consensus 619 rliGPNc~ 626 (829)
T 3pff_A 619 TIIGPATV 626 (829)
T ss_dssp EEECSSCC
T ss_pred EEEcCCCc
Confidence 88844433
No 458
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=21.58 E-value=4.8e+02 Score=24.00 Aligned_cols=86 Identities=13% Similarity=0.306 Sum_probs=44.9
Q ss_pred cEEEeCC---hHHHHHHHHHHhcCCC-CeEEEcCCCCCChHH--HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCc
Q 012095 157 QILVSNG---AKQSILQAVLAVCSPG-DEVIIPAPFWVSYPE--MARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (471)
Q Consensus 157 ~i~it~G---~~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~~--~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~ 230 (471)
-|++..| ..+++..+-.+ .+-| |.|++..|+|....+ +.+ -.+.+.++. +.-
T Consensus 94 pViaGvg~~st~eai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~--~lP 151 (314)
T 3qze_A 94 PVIAGTGANSTREAVALTEAA-KSGGADACLLVTPYYNKPTQEGMYQ-------------------HFRHIAEAV--AIP 151 (314)
T ss_dssp CEEEECCCSSHHHHHHHHHHH-HHTTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHS--CSC
T ss_pred cEEEeCCCcCHHHHHHHHHHH-HHcCCCEEEEcCCCCCCCCHHHHHH-------------------HHHHHHHhc--CCC
Confidence 4666555 45666544333 3345 899998888753210 000 011222221 233
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEcc
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDE 269 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De 269 (471)
+++.+.|.. ||..++.+.+.+ ++ ++|++.=|=|.
T Consensus 152 iilYn~P~~-tg~~l~~~~~~~---La-~~pnIvgiKds 185 (314)
T 3qze_A 152 QILYNVPGR-TSCDMLPETVER---LS-KVPNIIGIKEA 185 (314)
T ss_dssp EEEEECHHH-HSCCCCHHHHHH---HH-TSTTEEEEEEC
T ss_pred EEEEeCccc-cCCCCCHHHHHH---Hh-cCCCEEEEEcC
Confidence 455565543 788888555544 44 45676666554
No 459
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.44 E-value=2.3e+02 Score=24.77 Aligned_cols=32 Identities=13% Similarity=0.060 Sum_probs=20.2
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcC
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPA 186 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~ 186 (471)
...++||.|+...-..+.+.|++.|..|++..
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34566665555444556677778887777654
No 460
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=21.40 E-value=1.6e+02 Score=27.56 Aligned_cols=52 Identities=15% Similarity=0.166 Sum_probs=32.1
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCC-CCCChHHHHHHcCCEEEEecC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAP-FWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p-~y~~~~~~~~~~G~~~~~v~~ 208 (471)
..|+..+++..+...+..+- ..| -.|++++- .-..-...++.+|++++.++-
T Consensus 78 ~~vv~~SsGN~g~alA~~a~-~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~ 132 (351)
T 3aey_A 78 QAVACASTGNTAASAAAYAA-RAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEG 132 (351)
T ss_dssp SEEEESCSSHHHHHHHHHHH-HHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCHHHHHHHHHHH-HcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECC
Confidence 46666677777766554332 234 34556654 223344678999999998874
No 461
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.39 E-value=58 Score=32.02 Aligned_cols=29 Identities=7% Similarity=0.196 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEccCCCccc
Q 012095 246 PKNLLDEIARIVAKHPRLLVLSDEIYEHII 275 (471)
Q Consensus 246 ~~~~l~~i~~l~~~~~~~~ii~De~y~~~~ 275 (471)
++++++++++-|+++ |+-||.|-++.+..
T Consensus 75 t~~df~~lv~~aH~~-Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNV-GVRIYVDAVINHMC 103 (496)
T ss_dssp CHHHHHHHHHHHHHT-TCEEEEEECCSEEE
T ss_pred CHHHHHHHHHHHHHC-CCEEEEEEccCcCC
Confidence 688999999999999 99999999988754
No 462
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=21.34 E-value=3.1e+02 Score=22.41 Aligned_cols=70 Identities=9% Similarity=0.092 Sum_probs=40.7
Q ss_pred hHHHHHH-cCCEEEEecCCCCCCCcCCHHHHHhhhccCCcEEEEcCCCCCcccCCC-HHHHHHHHHHHHhCCCeEEEEc
Q 012095 192 YPEMARI-ADATPVILPTRISENFLLDPKVLESKLTEKSRLLILCSPSNPTGSVYP-KNLLDEIARIVAKHPRLLVLSD 268 (471)
Q Consensus 192 ~~~~~~~-~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~~i~i~~p~NPtG~~~~-~~~l~~i~~l~~~~~~~~ii~D 268 (471)
....++. .|..+..+.--++++ ++ ++.+.+.++---++|+.| .|.| ..+ ..+-..|.+.|..| ++.++.-
T Consensus 48 Ta~~L~e~~Gl~v~~v~k~~eGG---~p-~I~d~I~~geIdlVInt~-~pl~-~~~h~~D~~~IrR~A~~~-~IP~~T~ 119 (152)
T 1b93_A 48 TGNLISRATGMNVNAMLSGPMGG---DQ-QVGALISEGKIDVLIFFW-DPLN-AVPHDPDVKALLRLATVW-NIPVATN 119 (152)
T ss_dssp HHHHHHHHHCCCCEEECCGGGTH---HH-HHHHHHHTTCCCEEEEEC-CTTS-CCTTHHHHHHHHHHHHHT-TCCEESS
T ss_pred HHHHHHHHhCceeEEEEecCCCC---Cc-hHHHHHHCCCccEEEEcC-Cccc-CCcccccHHHHHHHHHHc-CCCEEeC
Confidence 3444444 677766664222222 33 455556544333344444 3445 344 77899999999999 9988843
No 463
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=21.30 E-value=4.7e+02 Score=23.84 Aligned_cols=88 Identities=17% Similarity=0.280 Sum_probs=45.3
Q ss_pred cEEEeCCh---HHHHHHHHHHhcCCC-CeEEEcCCCCCChH--HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhccCCc
Q 012095 157 QILVSNGA---KQSILQAVLAVCSPG-DEVIIPAPFWVSYP--EMARIADATPVILPTRISENFLLDPKVLESKLTEKSR 230 (471)
Q Consensus 157 ~i~it~G~---~~al~~~~~~l~~~g-d~Vlv~~p~y~~~~--~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~~~~ 230 (471)
-|++..|+ .+++..+-.+ -+-| |.|++..|+|.... .+.+ -.+.+.++. ++.-
T Consensus 82 pViaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~~s~~~l~~-------------------~f~~va~a~-~~lP 140 (303)
T 2wkj_A 82 KLIAHVGCVSTAESQQLAASA-KRYGFDAVSAVTPFYYPFSFEEHCD-------------------HYRAIIDSA-DGLP 140 (303)
T ss_dssp EEEEECCCSSHHHHHHHHHHH-HHHTCSEEEEECCCSSCCCHHHHHH-------------------HHHHHHHHH-TTCC
T ss_pred cEEEecCCCCHHHHHHHHHHH-HhCCCCEEEecCCCCCCCCHHHHHH-------------------HHHHHHHhC-CCCC
Confidence 46666654 5566544333 3335 88999889884311 1111 011222221 1133
Q ss_pred EEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccC
Q 012095 231 LLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEI 270 (471)
Q Consensus 231 ~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~ 270 (471)
+++.+.|. .||..++.+.+.+| + ++|++.=|=|..
T Consensus 141 iilYn~P~-~tg~~l~~~~~~~L---a-~~pnIvgiK~s~ 175 (303)
T 2wkj_A 141 MVVYNIPA-LSGVKLTLDQINTL---V-TLPGVGALXQTS 175 (303)
T ss_dssp EEEEECHH-HHCCCCCHHHHHHH---H-TSTTEEEEEECC
T ss_pred EEEEeCcc-ccCCCCCHHHHHHH---h-cCCCEEEEeCCC
Confidence 55556665 47888885555544 3 345666665544
No 464
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.27 E-value=2.3e+02 Score=27.00 Aligned_cols=71 Identities=8% Similarity=-0.034 Sum_probs=43.4
Q ss_pred cCCCCeEEEcCCCCCCh----------HHHHHHcCCEEEEecCCCCC-CC--cC---CHHHHHhhhc-cCCcEEEEcCCC
Q 012095 176 CSPGDEVIIPAPFWVSY----------PEMARIADATPVILPTRISE-NF--LL---DPKVLESKLT-EKSRLLILCSPS 238 (471)
Q Consensus 176 ~~~gd~Vlv~~p~y~~~----------~~~~~~~G~~~~~v~~~~~~-~~--~l---d~e~l~~~l~-~~~~~i~i~~p~ 238 (471)
+++||+|-+..|+.+.. ...++..|.+++.-+.-... +| +- -.++|.+++. +..++|+-.-..
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 57899999999998642 12356789999887754322 11 11 2445555554 466777765555
Q ss_pred CCcccCCC
Q 012095 239 NPTGSVYP 246 (471)
Q Consensus 239 NPtG~~~~ 246 (471)
.-+-.+++
T Consensus 120 yga~rlLp 127 (371)
T 3tla_A 120 DNSNSLLP 127 (371)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 54555555
No 465
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=21.25 E-value=86 Score=29.26 Aligned_cols=52 Identities=17% Similarity=0.158 Sum_probs=33.0
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
..|+..+++..+...+..+- ..| -.|++|+..-..-...++.+|++++.++.
T Consensus 74 ~~vv~aSsGN~g~alA~aa~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 127 (325)
T 3dwg_A 74 ATILEPTSGNTGISLAMAAR-LKGYRLICVMPENTSVERRQLLELYGAQIIFSAA 127 (325)
T ss_dssp CEEEEECSSHHHHHHHHHHH-HHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECS
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 45666667777776555442 224 34566655433445678899999999974
No 466
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=21.24 E-value=2.6e+02 Score=24.42 Aligned_cols=66 Identities=18% Similarity=0.156 Sum_probs=33.5
Q ss_pred CcEEEeCChHHHHHHHHHHhcC-CCCeEEEcCCCCCChHHH---HHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 156 DQILVSNGAKQSILQAVLAVCS-PGDEVIIPAPFWVSYPEM---ARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~-~gd~Vlv~~p~y~~~~~~---~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
..++||.|+...-..+.+.|++ .|..|++..-.-...... +...|.++..+..|. -|.+.+++.+.
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----~~~~~~~~~~~ 74 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI-----DDLQSIRALRD 74 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCC-----CCHHHHHHHHH
Confidence 3566665544444556667777 787776643221111122 222355555555543 25666666554
No 467
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=21.00 E-value=2.4e+02 Score=25.84 Aligned_cols=96 Identities=11% Similarity=0.024 Sum_probs=49.3
Q ss_pred CCcEEEeCChHHHHHHHHHHhcCCCCeEEEcCCCCCChHHH---HHHcCC--EEEEecCCCCCCCcCCHHHHHhhhcc--
Q 012095 155 PDQILVSNGAKQSILQAVLAVCSPGDEVIIPAPFWVSYPEM---ARIADA--TPVILPTRISENFLLDPKVLESKLTE-- 227 (471)
Q Consensus 155 ~~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~---~~~~G~--~~~~v~~~~~~~~~ld~e~l~~~l~~-- 227 (471)
...++||.|+...=..+.+.|++.|-.|++..-.-...... +...|. ++..+.+|- -|.+.+++++..
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-----~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDV-----ASREGFKMAADEVE 82 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCT-----TCHHHHHHHHHHHH
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCC-----CCHHHHHHHHHHHH
Confidence 34566665555444556777788887777654332222222 222343 566666653 256666665532
Q ss_pred ----CCcEEEEcCCC-CCcc--cCCCHHHHHHHHHH
Q 012095 228 ----KSRLLILCSPS-NPTG--SVYPKNLLDEIARI 256 (471)
Q Consensus 228 ----~~~~i~i~~p~-NPtG--~~~~~~~l~~i~~l 256 (471)
+.. ++|+|.. .+.+ ...+.++++++.+.
T Consensus 83 ~~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 117 (319)
T 3ioy_A 83 ARFGPVS-ILCNNAGVNLFQPIEESSYDDWDWLLGV 117 (319)
T ss_dssp HHTCCEE-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HhCCCCC-EEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 233 4444443 2222 23466667666554
No 468
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=20.96 E-value=69 Score=31.56 Aligned_cols=28 Identities=11% Similarity=0.331 Sum_probs=24.7
Q ss_pred CCCcccCCCHHHHHHHHHHHHhCCCeEEE
Q 012095 238 SNPTGSVYPKNLLDEIARIVAKHPRLLVL 266 (471)
Q Consensus 238 ~NPtG~~~~~~~l~~i~~l~~~~~~~~ii 266 (471)
++|.|-.+|++++++|++.|+++ ++-||
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~r-gI~VI 112 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSK-DIGLI 112 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTT-TCEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHc-CCeee
Confidence 34667799999999999999999 88888
No 469
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=20.61 E-value=1.8e+02 Score=27.53 Aligned_cols=52 Identities=19% Similarity=0.441 Sum_probs=33.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEE-EeC--------ChHHHHHHHHHHhc---CCCCeEEEc
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQIL-VSN--------GAKQSILQAVLAVC---SPGDEVIIP 185 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~-it~--------G~~~al~~~~~~l~---~~gd~Vlv~ 185 (471)
.|...--+.++++|.+.+| +..++|. ++. -+.+.|..++..|+ ++||.+++-
T Consensus 71 ~g~vnDA~~m~~~L~~~~G--f~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfY 134 (350)
T 4f6o_A 71 RGCINDAHNIFNFLTNGYG--YSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLH 134 (350)
T ss_dssp SSHHHHHHHHHHHHHHHSC--CCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHHhcC--CCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 4445555667777777677 4566664 444 25666776777764 478988863
No 470
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=20.58 E-value=2e+02 Score=26.33 Aligned_cols=71 Identities=23% Similarity=0.194 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCcEEEeCChHHHHHHHHHHhcCCC--CeEEEcCCCCCChHHHHHHcCCEEEEecC
Q 012095 132 AGTLELRSAICHKLKEENGLSYTPDQILVSNGAKQSILQAVLAVCSPG--DEVIIPAPFWVSYPEMARIADATPVILPT 208 (471)
Q Consensus 132 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~l~~~g--d~Vlv~~p~y~~~~~~~~~~G~~~~~v~~ 208 (471)
.|....|-+........ ....|+..+++..+...+..+- ..| -.|++|.-.-..-...++.+|++++.++-
T Consensus 47 tgSfKdR~a~~~i~~l~-----~~~~vv~~ssGN~g~alA~~a~-~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~ 119 (311)
T 1ve5_A 47 TGSFKARGALSKALALE-----NPKGLLAVSSGNHAQGVAYAAQ-VLGVKALVVMPEDASPYKKACARAYGAEVVDRGV 119 (311)
T ss_dssp GGBTHHHHHHHHHHHSS-----SCCCEEEECSSHHHHHHHHHHH-HHTCCEEEECCCC--CCHHHHHHHTTCEEECTTC
T ss_pred cCCcHHHHHHHHHHHhc-----CCCeEEEECCCcHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 45555555443333211 2345666667777776555442 223 34555654445566788999999987764
No 471
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=20.54 E-value=2.5e+02 Score=24.80 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=28.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEcCC-CCCChHHHHHH---c-CCEEEEecCCC
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIPAP-FWVSYPEMARI---A-DATPVILPTRI 210 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~~p-~y~~~~~~~~~---~-G~~~~~v~~~~ 210 (471)
..++||.|+...=..+.+.|.+.|..|++..- .-......... . |.++..+..|-
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl 71 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDL 71 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccC
Confidence 34666655544445566777788877776432 21111222221 1 66666676653
No 472
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=20.50 E-value=4.1e+02 Score=22.85 Aligned_cols=95 Identities=11% Similarity=0.107 Sum_probs=49.9
Q ss_pred CcEEEeCChHHHHHHHHHHhcCCCCeEEEc-CCCCCChHH---HHHHcCCEEEEecCCCCCCCcCCHHHHHhhhcc----
Q 012095 156 DQILVSNGAKQSILQAVLAVCSPGDEVIIP-APFWVSYPE---MARIADATPVILPTRISENFLLDPKVLESKLTE---- 227 (471)
Q Consensus 156 ~~i~it~G~~~al~~~~~~l~~~gd~Vlv~-~p~y~~~~~---~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~~---- 227 (471)
..++||.|+...=..+.+.|++.|..|++. .-.-..... .+...+.++..+..+.. |.+.+++.+..
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLE-----SLHGVEALYSSLDNE 82 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcC-----CHHHHHHHHHHHHHH
Confidence 456666555554456677788889877663 332222222 23445777777776532 55555544321
Q ss_pred --------CCcEEEEcCC-CCCccc--CCCHHHHHHHHHH
Q 012095 228 --------KSRLLILCSP-SNPTGS--VYPKNLLDEIARI 256 (471)
Q Consensus 228 --------~~~~i~i~~p-~NPtG~--~~~~~~l~~i~~l 256 (471)
+.. ++++|. ..+.+. ..+.+++++..++
T Consensus 83 ~~~~~~~~~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (255)
T 3icc_A 83 LQNRTGSTKFD-ILINNAGIGPGAFIEETTEQFFDRMVSV 121 (255)
T ss_dssp HHHHHSSSCEE-EEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred hcccccCCccc-EEEECCCCCCCCChhhCCHHHHHHHHhh
Confidence 133 444444 333332 3566677666554
No 473
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=20.35 E-value=2.2e+02 Score=25.22 Aligned_cols=66 Identities=14% Similarity=0.118 Sum_probs=33.7
Q ss_pred CcEEEeCC--hHHHHHHHHHHhcCCCCeEEEcCCCCCC-hHHHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc
Q 012095 156 DQILVSNG--AKQSILQAVLAVCSPGDEVIIPAPFWVS-YPEMARIADATPVILPTRISENFLLDPKVLESKLT 226 (471)
Q Consensus 156 ~~i~it~G--~~~al~~~~~~l~~~gd~Vlv~~p~y~~-~~~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~ 226 (471)
..++||.| +...=..+.+.|.+.|-.|++.+-.-.. .....+..+.++..+..|- -|.+.+++.+.
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~~~ 76 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDV-----QNEEHLASLAG 76 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCT-----TCHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccC-----CCHHHHHHHHH
Confidence 45666655 3333345666677788777764432211 1233333444555555543 25666666553
No 474
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=20.29 E-value=63 Score=25.99 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=26.6
Q ss_pred HHhhhccCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhCCCeEEEEccCCC
Q 012095 221 LESKLTEKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKHPRLLVLSDEIYE 272 (471)
Q Consensus 221 l~~~l~~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~~~~~ii~De~y~ 272 (471)
+++++....+.+++... .. -+++.++|+++ ++.+|-+.+..
T Consensus 87 ~~~~~~~gi~~i~~~~g-----~~-----~~~~~~~a~~~-Gir~vgpnc~g 127 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSG-----IR-----HPEFEKALKEA-GIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHCCSCEEECTT-----CC-----CHHHHHHHHHT-TCCEEESCCHH
T ss_pred HHHHHHcCCCEEEEcCC-----cC-----HHHHHHHHHHc-CCEEEcCCccc
Confidence 34444456777765322 21 26788899999 99999877654
No 475
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=20.19 E-value=2.7e+02 Score=22.78 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=39.8
Q ss_pred HHHHHcCCEEEEecCCCCCCCcCCHHHHHhhhc-cCCcEEEEcCCCCCcccCCCHHHHHHHHHHHHhC
Q 012095 194 EMARIADATPVILPTRISENFLLDPKVLESKLT-EKSRLLILCSPSNPTGSVYPKNLLDEIARIVAKH 260 (471)
Q Consensus 194 ~~~~~~G~~~~~v~~~~~~~~~ld~e~l~~~l~-~~~~~i~i~~p~NPtG~~~~~~~l~~i~~l~~~~ 260 (471)
.+++..|.+++....+ ..++++.+++. .++.+|.++.-.. ...+.++++++.+++.
T Consensus 40 ~~l~~~G~eVi~lG~~------~p~e~lv~aa~~~~~diV~lS~~~~-----~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 40 RALRDAGFEVVYTGLR------QTPEQVAMAAVQEDVDVIGVSILNG-----AHLHLMKRLMAKLREL 96 (161)
T ss_dssp HHHHHTTCEEECCCSB------CCHHHHHHHHHHTTCSEEEEEESSS-----CHHHHHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCC------CCHHHHHHHHHhcCCCEEEEEeech-----hhHHHHHHHHHHHHhc
Confidence 4567889999877643 57888877664 5788888765432 2456788888888876
Done!