Query 012096
Match_columns 471
No_of_seqs 136 out of 1240
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 21:33:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012096.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012096hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.5E-68 1.2E-72 528.8 36.7 436 6-466 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.4E-63 8.2E-68 504.0 36.7 445 10-467 6-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 9.7E-62 3.3E-66 490.6 42.6 437 10-467 4-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.3E-61 4.3E-66 486.7 35.6 440 6-467 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 2.9E-60 9.8E-65 478.1 36.4 432 10-466 7-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.4E-45 4.7E-50 369.2 32.2 404 3-465 3-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 3E-44 1E-48 356.6 30.2 349 10-447 20-385 (400)
8 1iir_A Glycosyltransferase GTF 100.0 4.5E-43 1.5E-47 349.8 23.1 379 13-466 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 5.1E-41 1.7E-45 335.1 32.2 383 8-466 16-413 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 4.7E-42 1.6E-46 342.6 23.8 376 13-466 1-400 (416)
11 3ia7_A CALG4; glycosysltransfe 100.0 8.3E-40 2.9E-44 324.7 31.8 380 11-466 3-398 (402)
12 2yjn_A ERYCIII, glycosyltransf 100.0 1.2E-39 4E-44 327.7 30.4 378 6-463 14-432 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 7E-41 2.4E-45 332.5 20.7 354 13-445 1-366 (404)
14 2iyf_A OLED, oleandomycin glyc 100.0 6.9E-39 2.4E-43 321.2 30.4 381 6-463 1-396 (430)
15 2p6p_A Glycosyl transferase; X 100.0 6.2E-38 2.1E-42 309.5 29.7 359 13-469 1-382 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 2.7E-36 9.3E-41 299.2 30.0 353 6-461 14-392 (398)
17 4fzr_A SSFS6; structural genom 100.0 6.6E-37 2.2E-41 303.7 23.4 350 7-446 10-384 (398)
18 3otg_A CALG1; calicheamicin, T 100.0 1.3E-32 4.3E-37 274.0 32.3 363 7-464 15-406 (412)
19 3tsa_A SPNG, NDP-rhamnosyltran 100.0 2.1E-33 7.1E-38 277.8 25.3 356 13-461 2-383 (391)
20 3s2u_A UDP-N-acetylglucosamine 100.0 6.9E-30 2.3E-34 249.5 24.2 303 13-426 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.3E-27 4.6E-32 207.6 14.6 164 268-446 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2E-19 7E-24 175.4 25.8 335 13-467 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 6E-15 2.1E-19 136.8 18.7 113 282-401 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 1.9E-15 6.4E-20 134.4 8.4 127 281-422 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.4 4.2E-10 1.4E-14 112.1 30.9 356 6-443 14-408 (438)
26 3okp_A GDP-mannose-dependent a 99.4 2.9E-10 1E-14 111.3 27.7 344 11-468 3-379 (394)
27 3fro_A GLGA glycogen synthase; 99.4 1E-10 3.5E-15 116.3 24.2 385 11-467 1-429 (439)
28 1v4v_A UDP-N-acetylglucosamine 99.4 6.7E-11 2.3E-15 115.4 21.6 124 283-425 198-334 (376)
29 3dzc_A UDP-N-acetylglucosamine 99.3 1.6E-11 5.5E-16 120.6 14.2 133 282-437 229-374 (396)
30 3ot5_A UDP-N-acetylglucosamine 99.3 5.9E-12 2E-16 123.9 9.7 159 281-466 222-393 (403)
31 2gek_A Phosphatidylinositol ma 99.2 3.4E-09 1.2E-13 104.2 27.1 307 9-425 17-349 (406)
32 2r60_A Glycosyl transferase, g 99.2 6.1E-09 2.1E-13 105.6 29.1 124 285-425 263-424 (499)
33 1vgv_A UDP-N-acetylglucosamine 99.2 6.4E-11 2.2E-15 115.8 13.0 126 282-425 204-342 (384)
34 2iuy_A Avigt4, glycosyltransfe 99.2 1.3E-09 4.3E-14 104.8 19.0 121 286-424 164-307 (342)
35 3beo_A UDP-N-acetylglucosamine 99.1 4.2E-09 1.4E-13 102.4 21.2 124 282-425 204-342 (375)
36 2jjm_A Glycosyl transferase, g 99.1 6.4E-08 2.2E-12 94.8 28.7 310 14-425 17-350 (394)
37 4hwg_A UDP-N-acetylglucosamine 99.1 1E-10 3.5E-15 114.1 7.7 316 12-426 9-343 (385)
38 2iw1_A Lipopolysaccharide core 99.1 5.3E-09 1.8E-13 101.6 19.3 124 285-425 197-337 (374)
39 2x6q_A Trehalose-synthase TRET 98.9 8E-07 2.7E-11 87.6 26.9 78 331-425 292-379 (416)
40 3s28_A Sucrose synthase 1; gly 98.8 1.1E-06 3.9E-11 92.8 24.3 122 285-423 573-728 (816)
41 3oy2_A Glycosyltransferase B73 98.7 7.2E-06 2.5E-10 80.5 24.8 124 285-425 185-355 (413)
42 1rzu_A Glycogen synthase 1; gl 98.6 4.1E-06 1.4E-10 84.2 21.5 124 285-423 292-438 (485)
43 2vsy_A XCC0866; transferase, g 98.6 7.6E-05 2.6E-09 76.5 31.1 82 332-425 434-522 (568)
44 2qzs_A Glycogen synthase; glyc 98.6 4.7E-05 1.6E-09 76.4 28.5 122 285-423 293-439 (485)
45 2hy7_A Glucuronosyltransferase 98.5 8.9E-06 3E-10 79.9 20.8 114 285-426 223-353 (406)
46 2f9f_A First mannosyl transfer 98.4 9.2E-07 3.1E-11 76.1 10.3 124 285-426 24-163 (177)
47 2xci_A KDO-transferase, 3-deox 98.1 0.00038 1.3E-08 67.3 21.7 99 333-446 261-365 (374)
48 4gyw_A UDP-N-acetylglucosamine 97.8 0.00033 1.1E-08 73.7 15.9 133 282-425 521-668 (723)
49 1psw_A ADP-heptose LPS heptosy 97.8 0.0012 4E-08 63.0 18.4 105 13-140 1-106 (348)
50 3qhp_A Type 1 capsular polysac 97.7 0.00034 1.1E-08 58.9 11.6 122 284-425 2-140 (166)
51 3tov_A Glycosyl transferase fa 97.7 0.0011 3.9E-08 63.3 16.6 109 10-141 6-116 (349)
52 3rhz_A GTF3, nucleotide sugar 97.7 0.0002 6.7E-09 68.1 10.5 145 285-463 179-335 (339)
53 3q3e_A HMW1C-like glycosyltran 97.6 0.00092 3.1E-08 67.7 14.0 131 283-425 440-588 (631)
54 2bfw_A GLGA glycogen synthase; 97.4 0.0028 9.4E-08 54.9 14.1 122 286-425 38-181 (200)
55 2gt1_A Lipopolysaccharide hept 97.3 0.0081 2.8E-07 56.6 16.6 48 13-60 1-48 (326)
56 2x0d_A WSAF; GT4 family, trans 96.6 0.012 4E-07 57.6 11.2 94 316-425 279-379 (413)
57 3vue_A GBSS-I, granule-bound s 95.3 0.11 3.6E-06 52.6 11.4 130 285-424 328-476 (536)
58 2phj_A 5'-nucleotidase SURE; S 94.6 0.37 1.3E-05 42.9 11.6 114 12-143 1-127 (251)
59 3ty2_A 5'-nucleotidase SURE; s 93.8 0.28 9.7E-06 43.7 9.1 114 10-143 9-135 (261)
60 2wqk_A 5'-nucleotidase SURE; S 92.6 0.7 2.4E-05 41.3 9.9 114 12-143 1-127 (251)
61 2e6c_A 5'-nucleotidase SURE; S 91.8 2.6 8.8E-05 37.3 12.4 112 13-143 1-129 (244)
62 1j9j_A Stationary phase surviV 90.3 2.6 8.8E-05 37.4 10.9 114 13-143 1-128 (247)
63 1uqt_A Alpha, alpha-trehalose- 90.1 2.3 7.8E-05 42.1 11.7 106 337-468 337-454 (482)
64 3qxc_A Dethiobiotin synthetase 90.1 1.7 5.9E-05 38.5 9.8 128 5-147 13-173 (242)
65 1l5x_A SurviVal protein E; str 90.0 3.1 0.00011 37.6 11.3 114 13-144 1-128 (280)
66 3t5t_A Putative glycosyltransf 88.6 2.3 7.8E-05 42.1 10.2 111 333-468 353-473 (496)
67 3auf_A Glycinamide ribonucleot 88.2 5.3 0.00018 35.0 11.4 111 6-143 16-131 (229)
68 2iz6_A Molybdenum cofactor car 86.6 5.3 0.00018 33.4 9.9 133 271-424 35-173 (176)
69 2v4n_A Multifunctional protein 85.4 9.1 0.00031 34.0 11.3 111 13-143 2-126 (254)
70 1g5t_A COB(I)alamin adenosyltr 83.7 8.5 0.00029 32.7 10.0 96 13-124 29-130 (196)
71 4dzz_A Plasmid partitioning pr 83.6 3.3 0.00011 35.2 7.7 82 14-124 3-85 (206)
72 2ywr_A Phosphoribosylglycinami 82.8 7.9 0.00027 33.5 9.7 104 12-144 1-111 (216)
73 2x0d_A WSAF; GT4 family, trans 81.7 0.9 3.1E-05 44.0 3.6 42 9-52 43-89 (413)
74 3vue_A GBSS-I, granule-bound s 81.3 1.2 4.2E-05 44.8 4.5 40 10-51 7-52 (536)
75 3fgn_A Dethiobiotin synthetase 81.3 9.7 0.00033 33.8 9.9 125 11-146 24-168 (251)
76 3rfo_A Methionyl-tRNA formyltr 79.9 7.3 0.00025 36.0 8.9 36 9-51 1-36 (317)
77 3av3_A Phosphoribosylglycinami 79.2 16 0.00053 31.5 10.3 104 12-144 3-113 (212)
78 1mvl_A PPC decarboxylase athal 78.1 3 0.0001 36.0 5.3 49 8-60 15-63 (209)
79 3lqk_A Dipicolinate synthase s 77.2 2.9 0.0001 35.8 5.0 48 10-60 5-53 (201)
80 3nb0_A Glycogen [starch] synth 77.2 20 0.00068 36.9 11.7 35 343-379 513-551 (725)
81 2ejb_A Probable aromatic acid 77.1 3.1 0.00011 35.2 5.1 46 12-60 1-46 (189)
82 3zqu_A Probable aromatic acid 75.6 2.9 9.8E-05 36.1 4.5 46 12-60 4-49 (209)
83 1kjn_A MTH0777; hypotethical p 75.3 3.3 0.00011 33.1 4.3 47 12-60 6-54 (157)
84 1tvm_A PTS system, galactitol- 74.0 5.7 0.0002 30.4 5.4 45 3-49 12-57 (113)
85 3igf_A ALL4481 protein; two-do 73.5 4.3 0.00015 38.6 5.5 37 12-50 1-38 (374)
86 1p3y_1 MRSD protein; flavoprot 72.4 3 0.0001 35.5 3.8 47 10-59 6-52 (194)
87 3qjg_A Epidermin biosynthesis 72.2 6.1 0.00021 32.9 5.5 44 13-59 6-49 (175)
88 1sbz_A Probable aromatic acid 71.2 4 0.00014 34.8 4.3 45 13-60 1-46 (197)
89 3ug7_A Arsenical pump-driving 70.3 12 0.00042 35.0 7.9 42 9-52 22-64 (349)
90 3vot_A L-amino acid ligase, BL 69.2 18 0.0006 34.8 9.1 37 9-52 2-38 (425)
91 2vqe_B 30S ribosomal protein S 68.4 46 0.0016 29.4 10.6 32 113-144 157-190 (256)
92 1g63_A Epidermin modifying enz 67.0 5.2 0.00018 33.6 4.1 45 13-60 3-47 (181)
93 3da8_A Probable 5'-phosphoribo 65.3 8.2 0.00028 33.4 5.1 110 6-143 6-119 (215)
94 3mc3_A DSRE/DSRF-like family p 64.4 11 0.00037 29.8 5.3 44 12-57 15-61 (134)
95 1jx7_A Hypothetical protein YC 64.0 12 0.00041 28.4 5.4 47 12-60 1-52 (117)
96 2g1u_A Hypothetical protein TM 63.6 7.7 0.00026 31.3 4.5 42 4-52 11-52 (155)
97 2bw0_A 10-FTHFDH, 10-formyltet 62.4 24 0.00082 32.7 8.1 31 13-50 23-53 (329)
98 3ih5_A Electron transfer flavo 62.2 14 0.00048 31.9 6.1 109 12-143 3-123 (217)
99 1ccw_A Protein (glutamate muta 61.1 13 0.00044 29.5 5.2 37 13-51 4-40 (137)
100 1fmt_A Methionyl-tRNA FMet for 61.1 31 0.0011 31.6 8.5 34 11-51 2-35 (314)
101 3ehd_A Uncharacterized conserv 60.1 30 0.001 28.3 7.3 41 10-52 2-43 (162)
102 3q0i_A Methionyl-tRNA formyltr 59.1 57 0.0019 30.0 9.9 34 11-51 6-39 (318)
103 3mcu_A Dipicolinate synthase, 58.9 9.1 0.00031 32.8 4.2 44 11-57 4-48 (207)
104 3bfv_A CAPA1, CAPB2, membrane 57.5 1E+02 0.0035 27.3 11.8 38 12-51 81-120 (271)
105 3n7t_A Macrophage binding prot 56.4 19 0.00067 31.7 6.1 38 12-51 9-57 (247)
106 3qvl_A Putative hydantoin race 56.2 51 0.0017 28.9 8.8 37 13-51 2-39 (245)
107 3dfz_A SIRC, precorrin-2 dehyd 56.2 18 0.00062 31.4 5.7 154 276-447 26-186 (223)
108 1jkx_A GART;, phosphoribosylgl 55.8 96 0.0033 26.4 10.4 104 13-144 1-110 (212)
109 4dim_A Phosphoribosylglycinami 55.6 40 0.0014 31.9 8.8 34 11-51 6-39 (403)
110 2qs7_A Uncharacterized protein 55.6 11 0.00038 30.2 3.9 44 14-59 9-53 (144)
111 3io3_A DEHA2D07832P; chaperone 55.6 20 0.00068 33.6 6.3 39 12-52 17-58 (348)
112 2q5c_A NTRC family transcripti 55.1 51 0.0018 27.7 8.3 47 99-150 129-175 (196)
113 3g0o_A 3-hydroxyisobutyrate de 54.8 6.3 0.00021 36.1 2.7 39 6-51 1-39 (303)
114 3rpe_A MDAB, modulator of drug 54.7 12 0.0004 32.5 4.2 43 6-50 19-68 (218)
115 3mjf_A Phosphoribosylamine--gl 53.9 30 0.001 33.4 7.5 25 12-43 3-27 (431)
116 2yxb_A Coenzyme B12-dependent 53.8 13 0.00046 30.3 4.3 39 11-51 17-55 (161)
117 2b8t_A Thymidine kinase; deoxy 52.8 63 0.0021 27.9 8.7 38 13-52 12-50 (223)
118 3kcq_A Phosphoribosylglycinami 52.1 64 0.0022 27.7 8.5 102 11-144 7-113 (215)
119 1e2b_A Enzyme IIB-cellobiose; 51.9 27 0.00092 26.2 5.4 38 11-50 2-39 (106)
120 3eag_A UDP-N-acetylmuramate:L- 51.6 14 0.00047 34.2 4.5 35 10-50 2-36 (326)
121 3cio_A ETK, tyrosine-protein k 51.3 83 0.0028 28.4 9.7 36 14-51 106-142 (299)
122 1qzu_A Hypothetical protein MD 50.8 19 0.00065 30.8 4.9 49 10-60 17-65 (206)
123 2obn_A Hypothetical protein; s 49.8 1.3E+02 0.0044 28.0 10.7 44 12-57 152-196 (349)
124 1y80_A Predicted cobalamin bin 49.5 22 0.00076 30.3 5.2 40 11-52 87-126 (210)
125 3la6_A Tyrosine-protein kinase 49.4 1.1E+02 0.0039 27.3 10.2 37 13-51 92-130 (286)
126 3ged_A Short-chain dehydrogena 49.3 65 0.0022 28.3 8.3 33 14-51 3-35 (247)
127 3ghy_A Ketopantoate reductase 49.2 9.1 0.00031 35.6 2.8 42 12-60 3-44 (335)
128 3tqr_A Phosphoribosylglycinami 49.2 76 0.0026 27.2 8.5 106 11-144 4-114 (215)
129 3zzm_A Bifunctional purine bio 49.2 31 0.0011 33.7 6.4 95 13-122 10-110 (523)
130 4b4o_A Epimerase family protei 48.8 21 0.00071 32.2 5.2 32 13-50 1-32 (298)
131 2qyt_A 2-dehydropantoate 2-red 48.5 7.3 0.00025 35.7 2.1 42 11-59 7-54 (317)
132 3l7i_A Teichoic acid biosynthe 48.5 43 0.0015 34.8 8.2 117 337-468 604-721 (729)
133 2r8r_A Sensor protein; KDPD, P 48.3 26 0.00089 30.5 5.4 40 10-51 4-43 (228)
134 2i2x_B MTAC, methyltransferase 48.1 27 0.00091 31.0 5.6 40 10-51 121-160 (258)
135 3llv_A Exopolyphosphatase-rela 47.9 9.5 0.00033 30.0 2.4 34 11-51 5-38 (141)
136 1rcu_A Conserved hypothetical 47.9 1.2E+02 0.0042 25.4 10.3 96 271-378 48-150 (195)
137 4dll_A 2-hydroxy-3-oxopropiona 47.0 20 0.00067 33.0 4.8 36 9-51 28-63 (320)
138 3pdi_B Nitrogenase MOFE cofact 46.1 1E+02 0.0034 29.9 9.9 87 12-141 313-399 (458)
139 1gsa_A Glutathione synthetase; 46.1 18 0.00063 32.7 4.4 38 12-51 1-41 (316)
140 4ds3_A Phosphoribosylglycinami 45.8 1.3E+02 0.0044 25.6 9.4 105 12-143 7-116 (209)
141 3hn2_A 2-dehydropantoate 2-red 45.5 19 0.00064 33.0 4.4 46 13-71 3-48 (312)
142 3l6d_A Putative oxidoreductase 45.3 9.8 0.00034 34.8 2.4 38 6-50 3-40 (306)
143 3dm5_A SRP54, signal recogniti 45.1 74 0.0025 30.7 8.6 40 12-53 100-139 (443)
144 3s2u_A UDP-N-acetylglucosamine 44.3 39 0.0013 31.5 6.5 85 285-375 5-120 (365)
145 3nbm_A PTS system, lactose-spe 44.2 37 0.0013 25.5 5.1 39 9-49 3-41 (108)
146 1id1_A Putative potassium chan 44.1 16 0.00055 29.2 3.3 32 13-51 4-35 (153)
147 3kvo_A Hydroxysteroid dehydrog 44.1 88 0.003 28.9 8.9 33 14-51 46-78 (346)
148 2ew2_A 2-dehydropantoate 2-red 44.0 14 0.00049 33.5 3.3 33 12-51 3-35 (316)
149 4dmm_A 3-oxoacyl-[acyl-carrier 43.8 81 0.0028 27.8 8.3 33 13-50 28-60 (269)
150 2r6j_A Eugenol synthase 1; phe 43.3 18 0.00061 33.0 3.8 37 10-52 8-45 (318)
151 3dii_A Short-chain dehydrogena 43.2 84 0.0029 27.2 8.2 34 13-51 2-35 (247)
152 2h78_A Hibadh, 3-hydroxyisobut 42.7 18 0.00061 32.9 3.7 34 11-51 2-35 (302)
153 1psw_A ADP-heptose LPS heptosy 42.6 1.3E+02 0.0043 27.5 9.8 99 14-143 182-288 (348)
154 3doj_A AT3G25530, dehydrogenas 42.5 19 0.00065 32.9 3.9 36 9-51 18-53 (310)
155 3edm_A Short chain dehydrogena 42.4 1E+02 0.0035 26.8 8.8 32 14-50 9-40 (259)
156 1lss_A TRK system potassium up 42.4 20 0.00069 27.7 3.6 33 12-51 4-36 (140)
157 1vco_A CTP synthetase; tetrame 42.4 23 0.00078 35.4 4.6 48 1-51 1-51 (550)
158 3vps_A TUNA, NAD-dependent epi 41.9 24 0.00084 31.9 4.6 40 6-51 1-40 (321)
159 3ezx_A MMCP 1, monomethylamine 41.5 34 0.0012 29.4 5.1 41 10-52 90-130 (215)
160 1eiw_A Hypothetical protein MT 41.1 39 0.0013 25.6 4.7 65 346-424 36-109 (111)
161 3ic5_A Putative saccharopine d 41.0 26 0.00087 26.1 3.9 33 12-51 5-38 (118)
162 3hwr_A 2-dehydropantoate 2-red 40.7 14 0.00049 34.0 2.7 45 9-60 16-60 (318)
163 3lzw_A Ferredoxin--NADP reduct 40.5 9.7 0.00033 34.8 1.5 40 6-52 1-40 (332)
164 3p19_A BFPVVD8, putative blue 40.2 1.1E+02 0.0038 26.8 8.6 34 13-51 16-49 (266)
165 2a5l_A Trp repressor binding p 40.2 32 0.0011 28.7 4.8 39 11-51 4-43 (200)
166 3v8b_A Putative dehydrogenase, 40.1 1.3E+02 0.0044 26.7 9.1 33 14-51 29-61 (283)
167 2fb6_A Conserved hypothetical 39.3 28 0.00094 26.7 3.7 41 13-55 8-52 (117)
168 3r6d_A NAD-dependent epimerase 39.3 34 0.0012 29.0 4.9 36 11-51 3-39 (221)
169 1evy_A Glycerol-3-phosphate de 38.7 17 0.00059 34.1 3.0 33 12-51 15-47 (366)
170 3v2g_A 3-oxoacyl-[acyl-carrier 38.3 1.2E+02 0.0041 26.7 8.6 33 14-51 32-64 (271)
171 3lrx_A Putative hydrogenase; a 38.2 29 0.001 28.0 4.0 35 13-52 24-58 (158)
172 3o1l_A Formyltetrahydrofolate 38.2 2.3E+02 0.0078 25.6 10.7 107 9-143 102-211 (302)
173 3i83_A 2-dehydropantoate 2-red 38.1 22 0.00076 32.6 3.6 40 13-60 3-42 (320)
174 3p9x_A Phosphoribosylglycinami 37.8 1.1E+02 0.0039 26.0 7.8 104 12-143 2-111 (211)
175 3obb_A Probable 3-hydroxyisobu 37.7 31 0.0011 31.4 4.4 32 12-50 3-34 (300)
176 3sc4_A Short chain dehydrogena 37.6 92 0.0031 27.7 7.7 33 14-51 10-42 (285)
177 3k96_A Glycerol-3-phosphate de 37.6 18 0.0006 34.0 2.8 34 11-51 28-61 (356)
178 3gpi_A NAD-dependent epimerase 37.5 32 0.0011 30.6 4.6 34 11-51 2-35 (286)
179 3tqq_A Methionyl-tRNA formyltr 37.5 90 0.0031 28.5 7.5 33 12-51 2-34 (314)
180 3m1a_A Putative dehydrogenase; 37.3 1.3E+02 0.0045 26.4 8.7 33 14-51 6-38 (281)
181 3ot1_A 4-methyl-5(B-hydroxyeth 37.2 55 0.0019 27.7 5.8 43 6-51 3-45 (208)
182 3kkl_A Probable chaperone prot 36.8 55 0.0019 28.7 5.8 39 12-52 3-52 (244)
183 1f0y_A HCDH, L-3-hydroxyacyl-C 36.6 21 0.0007 32.5 3.1 35 10-51 13-47 (302)
184 3lyu_A Putative hydrogenase; t 36.4 36 0.0012 26.9 4.1 36 12-52 18-53 (142)
185 4hb9_A Similarities with proba 36.4 21 0.00073 33.6 3.3 29 13-48 2-30 (412)
186 3f6r_A Flavodoxin; FMN binding 36.3 46 0.0016 26.1 4.9 39 12-52 1-40 (148)
187 2gk4_A Conserved hypothetical 36.2 56 0.0019 28.4 5.6 23 28-52 31-53 (232)
188 4fn4_A Short chain dehydrogena 36.2 1.2E+02 0.0042 26.6 8.0 33 14-51 8-40 (254)
189 3czc_A RMPB; alpha/beta sandwi 36.1 36 0.0012 25.6 3.9 38 10-49 16-55 (110)
190 2bln_A Protein YFBG; transfera 35.8 88 0.003 28.4 7.2 32 13-51 1-32 (305)
191 1p9o_A Phosphopantothenoylcyst 35.7 25 0.00086 32.2 3.4 36 15-52 40-89 (313)
192 4huj_A Uncharacterized protein 35.7 16 0.00054 31.5 2.0 34 10-50 21-54 (220)
193 2vo1_A CTP synthase 1; pyrimid 35.7 35 0.0012 30.4 4.1 44 10-55 20-66 (295)
194 3sju_A Keto reductase; short-c 35.6 1.4E+02 0.0049 26.2 8.7 33 14-51 25-57 (279)
195 2xj4_A MIPZ; replication, cell 35.4 34 0.0012 30.7 4.3 39 12-52 3-43 (286)
196 3jy6_A Transcriptional regulat 35.3 2.2E+02 0.0075 24.6 10.5 28 114-141 63-91 (276)
197 2nly_A BH1492 protein, diverge 35.2 1.8E+02 0.006 25.5 8.7 39 98-140 114-155 (245)
198 2dpo_A L-gulonate 3-dehydrogen 35.1 21 0.00072 32.9 2.9 35 10-51 4-38 (319)
199 4grd_A N5-CAIR mutase, phospho 35.1 1.9E+02 0.0064 23.7 8.5 146 282-449 11-165 (173)
200 3kjh_A CO dehydrogenase/acetyl 34.9 26 0.0009 30.3 3.5 37 13-51 1-37 (254)
201 1bg6_A N-(1-D-carboxylethyl)-L 34.6 25 0.00086 32.6 3.4 33 12-51 4-36 (359)
202 3gl9_A Response regulator; bet 34.6 52 0.0018 24.5 4.8 33 114-146 46-87 (122)
203 4iin_A 3-ketoacyl-acyl carrier 34.5 1.5E+02 0.005 26.0 8.5 32 14-50 30-61 (271)
204 1uan_A Hypothetical protein TT 34.4 91 0.0031 26.8 6.8 17 31-49 20-36 (227)
205 2hy5_A Putative sulfurtransfer 34.4 92 0.0031 24.0 6.2 45 14-60 2-50 (130)
206 2zki_A 199AA long hypothetical 34.0 37 0.0013 28.4 4.1 38 11-51 3-41 (199)
207 3l4e_A Uncharacterized peptida 34.0 75 0.0026 27.0 6.0 46 273-318 18-63 (206)
208 2q62_A ARSH; alpha/beta, flavo 33.7 48 0.0016 29.2 4.9 41 8-50 30-73 (247)
209 1meo_A Phosophoribosylglycinam 33.6 2.2E+02 0.0075 24.1 10.2 105 13-144 1-110 (209)
210 2khz_A C-MYC-responsive protei 33.5 1E+02 0.0035 25.0 6.6 124 285-424 13-150 (165)
211 2raf_A Putative dinucleotide-b 33.4 51 0.0017 27.9 4.9 35 10-51 17-51 (209)
212 2d1p_B TUSC, hypothetical UPF0 33.4 84 0.0029 23.8 5.7 45 14-60 3-50 (119)
213 4f3r_A Phosphopantetheine aden 33.3 49 0.0017 26.9 4.5 39 10-50 2-40 (162)
214 3dfu_A Uncharacterized protein 33.3 28 0.00097 30.3 3.2 34 11-51 5-38 (232)
215 2l2q_A PTS system, cellobiose- 33.2 48 0.0016 24.8 4.2 36 12-49 4-39 (109)
216 3to5_A CHEY homolog; alpha(5)b 33.2 47 0.0016 25.9 4.3 41 102-144 47-96 (134)
217 3imf_A Short chain dehydrogena 33.1 1.9E+02 0.0064 25.0 8.9 33 14-51 7-39 (257)
218 3dhn_A NAD-dependent epimerase 32.8 83 0.0029 26.5 6.4 35 12-52 4-38 (227)
219 3tov_A Glycosyl transferase fa 32.8 1.1E+02 0.0038 28.2 7.6 99 13-143 186-288 (349)
220 2lpm_A Two-component response 32.5 25 0.00086 27.1 2.5 29 114-142 53-86 (123)
221 2r85_A PURP protein PF1517; AT 32.3 35 0.0012 31.2 4.0 33 13-53 3-35 (334)
222 1q6z_A BFD, BFDC, benzoylforma 32.0 84 0.0029 31.0 7.0 73 302-376 6-95 (528)
223 1qkk_A DCTD, C4-dicarboxylate 31.7 1E+02 0.0035 23.9 6.3 62 369-444 74-135 (155)
224 1pno_A NAD(P) transhydrogenase 31.7 42 0.0014 27.3 3.6 38 13-52 24-64 (180)
225 3pgx_A Carveol dehydrogenase; 31.6 1.6E+02 0.0055 25.9 8.3 32 14-50 16-47 (280)
226 3qsg_A NAD-binding phosphogluc 31.2 24 0.00082 32.3 2.6 35 10-51 22-57 (312)
227 3a28_C L-2.3-butanediol dehydr 31.2 1.8E+02 0.0063 25.1 8.5 33 14-51 3-35 (258)
228 2zat_A Dehydrogenase/reductase 31.2 63 0.0021 28.2 5.3 46 1-51 1-47 (260)
229 3ijr_A Oxidoreductase, short c 31.1 2E+02 0.0068 25.5 8.9 33 14-51 48-80 (291)
230 3obi_A Formyltetrahydrofolate 31.1 2.9E+02 0.0099 24.7 11.0 108 8-143 85-196 (288)
231 1d4o_A NADP(H) transhydrogenas 31.1 43 0.0015 27.4 3.6 36 14-51 24-62 (184)
232 3fwz_A Inner membrane protein 31.0 28 0.00097 27.2 2.7 33 13-52 8-40 (140)
233 3q9l_A Septum site-determining 31.0 44 0.0015 29.1 4.3 38 12-51 1-40 (260)
234 3pdu_A 3-hydroxyisobutyrate de 30.6 32 0.0011 30.9 3.3 33 12-51 1-33 (287)
235 3abi_A Putative uncharacterize 30.5 1.9E+02 0.0066 26.7 8.9 43 1-51 1-47 (365)
236 4egb_A DTDP-glucose 4,6-dehydr 30.4 3E+02 0.01 24.7 12.2 35 10-50 22-58 (346)
237 1ydg_A Trp repressor binding p 30.4 61 0.0021 27.3 4.9 38 11-50 5-43 (211)
238 1mio_A Nitrogenase molybdenum 30.3 1.9E+02 0.0066 28.6 9.1 33 101-141 448-480 (533)
239 3s55_A Putative short-chain de 30.2 2E+02 0.0067 25.2 8.6 33 14-51 11-43 (281)
240 3zq6_A Putative arsenical pump 30.2 55 0.0019 30.0 4.9 43 8-52 9-52 (324)
241 1yb4_A Tartronic semialdehyde 30.2 33 0.0011 30.8 3.3 32 11-49 2-33 (295)
242 1pjq_A CYSG, siroheme synthase 30.1 1.7E+02 0.0059 28.2 8.6 146 283-447 13-168 (457)
243 1g3q_A MIND ATPase, cell divis 30.0 49 0.0017 28.3 4.4 37 13-51 2-40 (237)
244 3ezl_A Acetoacetyl-COA reducta 30.0 1.2E+02 0.0039 26.3 6.9 32 13-49 13-44 (256)
245 1ehi_A LMDDL2, D-alanine:D-lac 30.0 54 0.0018 30.8 4.9 37 12-50 3-44 (377)
246 2dtx_A Glucose 1-dehydrogenase 29.9 2.3E+02 0.0079 24.6 9.0 33 14-51 9-41 (264)
247 4gbj_A 6-phosphogluconate dehy 29.9 41 0.0014 30.5 3.9 29 14-49 7-35 (297)
248 2bru_C NAD(P) transhydrogenase 29.8 46 0.0016 27.2 3.6 38 13-52 31-71 (186)
249 2w36_A Endonuclease V; hypoxan 29.5 24 0.00081 30.6 2.0 38 101-141 93-137 (225)
250 1rw7_A YDR533CP; alpha-beta sa 29.5 89 0.003 27.2 5.9 39 12-52 3-52 (243)
251 2fsv_C NAD(P) transhydrogenase 29.3 47 0.0016 27.7 3.6 37 13-51 47-86 (203)
252 3lou_A Formyltetrahydrofolate 29.1 3.2E+02 0.011 24.5 10.5 108 8-143 91-201 (292)
253 3s40_A Diacylglycerol kinase; 29.1 71 0.0024 28.9 5.4 80 285-378 12-97 (304)
254 3d1l_A Putative NADP oxidoredu 29.0 19 0.00066 31.9 1.5 39 5-50 3-42 (266)
255 3ktd_A Prephenate dehydrogenas 29.0 31 0.001 32.1 2.9 40 5-51 1-40 (341)
256 3nrb_A Formyltetrahydrofolate 29.0 3.1E+02 0.011 24.5 11.2 108 8-143 84-195 (287)
257 3nrc_A Enoyl-[acyl-carrier-pro 29.0 1.1E+02 0.0037 27.1 6.6 34 14-52 27-62 (280)
258 3n0v_A Formyltetrahydrofolate 28.9 3.1E+02 0.011 24.5 10.5 108 8-143 86-196 (286)
259 1cp2_A CP2, nitrogenase iron p 28.9 51 0.0017 29.0 4.3 37 12-50 1-37 (269)
260 1djl_A Transhydrogenase DIII; 28.9 48 0.0017 27.7 3.6 37 13-51 46-85 (207)
261 4dgk_A Phytoene dehydrogenase; 28.8 21 0.00073 34.9 1.9 31 12-49 1-31 (501)
262 2pk3_A GDP-6-deoxy-D-LYXO-4-he 28.8 67 0.0023 28.9 5.2 39 7-51 7-45 (321)
263 1ks9_A KPA reductase;, 2-dehyd 28.7 38 0.0013 30.2 3.5 32 13-51 1-32 (291)
264 4da9_A Short-chain dehydrogena 28.6 3E+02 0.01 24.1 9.6 32 14-50 30-61 (280)
265 3tpc_A Short chain alcohol deh 28.5 2.8E+02 0.0096 23.8 9.6 33 14-51 8-40 (257)
266 3ax6_A Phosphoribosylaminoimid 28.5 73 0.0025 29.8 5.6 34 12-52 1-34 (380)
267 2c5m_A CTP synthase; cytidine 28.4 37 0.0013 30.0 3.0 43 10-54 20-65 (294)
268 2z04_A Phosphoribosylaminoimid 28.4 58 0.002 30.2 4.8 34 12-52 1-34 (365)
269 4h15_A Short chain alcohol deh 28.1 80 0.0027 27.9 5.4 32 14-50 12-43 (261)
270 3p0r_A Azoreductase; structura 28.0 54 0.0019 27.9 4.1 39 11-49 3-46 (211)
271 3cea_A MYO-inositol 2-dehydrog 27.5 53 0.0018 30.2 4.3 41 5-51 1-42 (346)
272 2q5c_A NTRC family transcripti 27.3 40 0.0014 28.4 3.1 29 350-379 51-79 (196)
273 3g79_A NDP-N-acetyl-D-galactos 27.2 59 0.002 31.8 4.7 37 10-53 16-54 (478)
274 3t6k_A Response regulator rece 27.2 75 0.0026 24.1 4.6 33 114-146 48-89 (136)
275 3dtt_A NADP oxidoreductase; st 27.2 46 0.0016 29.0 3.6 39 7-52 14-52 (245)
276 1vi6_A 30S ribosomal protein S 27.1 51 0.0017 28.1 3.6 31 114-144 115-147 (208)
277 3u7i_A FMN-dependent NADH-azor 26.8 61 0.0021 27.9 4.3 40 10-49 2-48 (223)
278 3s40_A Diacylglycerol kinase; 26.8 77 0.0026 28.7 5.2 44 5-51 2-48 (304)
279 4g6h_A Rotenone-insensitive NA 26.8 39 0.0013 33.3 3.4 35 11-52 41-75 (502)
280 3of5_A Dethiobiotin synthetase 26.6 69 0.0024 27.6 4.6 37 11-49 3-40 (228)
281 2d1p_A TUSD, hypothetical UPF0 26.6 1.8E+02 0.0063 22.7 6.7 46 13-60 13-62 (140)
282 2bon_A Lipid kinase; DAG kinas 26.5 1.4E+02 0.0046 27.4 6.9 81 282-378 30-118 (332)
283 2a33_A Hypothetical protein; s 26.5 86 0.0029 26.8 5.1 40 10-51 11-54 (215)
284 3f2v_A General stress protein 26.5 44 0.0015 28.1 3.2 37 12-50 1-38 (192)
285 4hps_A Pyrrolidone-carboxylate 26.5 78 0.0027 27.4 4.8 29 10-38 21-51 (228)
286 3l4b_C TRKA K+ channel protien 26.3 22 0.00075 30.4 1.3 33 13-52 1-33 (218)
287 3tsc_A Putative oxidoreductase 26.3 1.3E+02 0.0045 26.4 6.7 32 14-50 12-43 (277)
288 4ezb_A Uncharacterized conserv 26.3 44 0.0015 30.6 3.4 33 12-51 24-57 (317)
289 2hmt_A YUAA protein; RCK, KTN, 26.2 31 0.0011 26.7 2.1 34 11-51 5-38 (144)
290 3m6m_D Sensory/regulatory prot 26.1 60 0.0021 25.0 3.9 32 114-145 58-100 (143)
291 2nwq_A Probable short-chain de 26.1 59 0.002 28.8 4.2 35 12-51 20-54 (272)
292 4gi5_A Quinone reductase; prot 26.0 1E+02 0.0034 27.7 5.7 38 10-49 20-60 (280)
293 3ius_A Uncharacterized conserv 26.0 35 0.0012 30.3 2.7 34 12-52 5-38 (286)
294 1o4v_A Phosphoribosylaminoimid 26.0 1.5E+02 0.0052 24.5 6.1 143 284-450 14-165 (183)
295 2qv7_A Diacylglycerol kinase D 25.8 85 0.0029 28.9 5.4 81 285-378 28-114 (337)
296 4id9_A Short-chain dehydrogena 25.7 60 0.002 29.7 4.3 37 9-51 16-52 (347)
297 3bch_A 40S ribosomal protein S 25.6 55 0.0019 28.8 3.7 32 114-145 151-184 (253)
298 1t1j_A Hypothetical protein; s 25.6 82 0.0028 24.4 4.3 34 11-46 6-47 (125)
299 3ew7_A LMO0794 protein; Q8Y8U8 25.5 91 0.0031 26.0 5.2 34 13-52 1-34 (221)
300 2pju_A Propionate catabolism o 25.4 51 0.0018 28.5 3.5 28 349-379 64-91 (225)
301 2vns_A Metalloreductase steap3 25.1 39 0.0013 28.8 2.7 34 11-51 27-60 (215)
302 1pzg_A LDH, lactate dehydrogen 25.1 35 0.0012 31.5 2.5 36 9-51 6-42 (331)
303 3ihm_A Styrene monooxygenase A 25.0 35 0.0012 32.7 2.6 40 6-52 15-55 (430)
304 3e1t_A Halogenase; flavoprotei 25.0 33 0.0011 33.9 2.5 39 6-51 1-39 (512)
305 2pju_A Propionate catabolism o 25.0 52 0.0018 28.5 3.4 41 98-143 140-180 (225)
306 3end_A Light-independent proto 25.0 71 0.0024 28.8 4.6 40 10-51 39-78 (307)
307 1wrd_A TOM1, target of MYB pro 25.0 1.4E+02 0.0048 22.1 5.4 34 410-452 3-36 (103)
308 3f6p_A Transcriptional regulat 24.8 95 0.0032 22.8 4.7 33 114-146 46-84 (120)
309 4g65_A TRK system potassium up 24.8 26 0.00088 34.2 1.6 33 12-51 3-35 (461)
310 2etv_A Iron(III) ABC transport 24.8 66 0.0023 29.7 4.4 29 114-142 96-125 (346)
311 2hy5_B Intracellular sulfur ox 24.8 1.3E+02 0.0045 23.4 5.5 47 12-60 5-54 (136)
312 1z82_A Glycerol-3-phosphate de 24.5 49 0.0017 30.4 3.5 32 13-51 15-46 (335)
313 2afh_E Nitrogenase iron protei 24.4 71 0.0024 28.5 4.5 37 12-50 2-38 (289)
314 2i2c_A Probable inorganic poly 24.3 27 0.00093 31.3 1.5 28 349-378 36-69 (272)
315 2vrn_A Protease I, DR1199; cys 24.3 1.5E+02 0.0052 24.2 6.3 40 10-52 7-46 (190)
316 1hyq_A MIND, cell division inh 24.2 60 0.002 28.4 3.9 35 15-51 5-40 (263)
317 1ihu_A Arsenical pump-driving 24.2 64 0.0022 32.4 4.5 45 6-52 1-46 (589)
318 3cky_A 2-hydroxymethyl glutara 24.1 73 0.0025 28.5 4.5 32 12-50 4-35 (301)
319 2jk1_A HUPR, hydrogenase trans 24.1 1.7E+02 0.0059 21.9 6.3 49 369-425 71-119 (139)
320 2an1_A Putative kinase; struct 24.0 41 0.0014 30.3 2.7 70 299-377 21-94 (292)
321 3oec_A Carveol dehydrogenase ( 24.0 2.5E+02 0.0084 25.3 8.2 32 14-50 47-78 (317)
322 3h2s_A Putative NADH-flavin re 24.0 1E+02 0.0035 25.8 5.2 33 13-51 1-33 (224)
323 1u9c_A APC35852; structural ge 23.9 1.3E+02 0.0045 25.4 6.0 38 13-52 6-52 (224)
324 3c1o_A Eugenol synthase; pheny 23.8 68 0.0023 28.9 4.3 35 12-52 4-38 (321)
325 4b79_A PA4098, probable short- 23.8 92 0.0031 27.2 4.9 42 5-51 1-44 (242)
326 3qha_A Putative oxidoreductase 23.8 38 0.0013 30.6 2.4 33 12-51 15-47 (296)
327 3qvo_A NMRA family protein; st 23.8 83 0.0028 26.9 4.7 34 13-51 23-57 (236)
328 2b69_A UDP-glucuronate decarbo 23.7 96 0.0033 28.3 5.4 37 8-50 23-59 (343)
329 1iow_A DD-ligase, DDLB, D-ALA\ 23.6 87 0.003 27.9 4.9 37 13-51 3-43 (306)
330 3ioy_A Short-chain dehydrogena 23.5 1E+02 0.0034 28.1 5.4 33 14-51 9-41 (319)
331 2q2v_A Beta-D-hydroxybutyrate 23.5 1.8E+02 0.006 25.1 6.9 33 14-51 5-37 (255)
332 2rjn_A Response regulator rece 23.4 1.3E+02 0.0043 23.2 5.4 39 6-50 1-39 (154)
333 4eso_A Putative oxidoreductase 23.3 90 0.0031 27.2 4.8 33 14-51 9-41 (255)
334 3iqw_A Tail-anchored protein t 23.3 74 0.0025 29.4 4.4 40 11-52 14-54 (334)
335 4e12_A Diketoreductase; oxidor 23.3 59 0.002 29.0 3.7 32 12-50 4-35 (283)
336 1e4e_A Vancomycin/teicoplanin 23.3 69 0.0024 29.5 4.3 38 12-51 3-44 (343)
337 3t7c_A Carveol dehydrogenase; 23.3 3.9E+02 0.013 23.6 9.7 32 14-50 29-60 (299)
338 2ahr_A Putative pyrroline carb 23.2 51 0.0017 28.9 3.2 33 11-50 2-34 (259)
339 1dhr_A Dihydropteridine reduct 23.2 1.2E+02 0.004 26.1 5.5 33 14-51 8-40 (241)
340 4b4k_A N5-carboxyaminoimidazol 23.2 3.2E+02 0.011 22.5 11.3 146 283-450 22-176 (181)
341 2e1m_A L-glutamate oxidase; L- 23.2 1.1E+02 0.0038 28.7 5.6 39 5-50 37-75 (376)
342 3c24_A Putative oxidoreductase 23.2 54 0.0018 29.3 3.4 32 12-50 11-43 (286)
343 2ae2_A Protein (tropinone redu 23.1 98 0.0034 26.9 5.1 33 14-51 10-42 (260)
344 2pn1_A Carbamoylphosphate synt 23.1 86 0.0029 28.5 4.9 33 11-51 3-37 (331)
345 1t5b_A Acyl carrier protein ph 23.0 75 0.0026 26.3 4.1 37 12-50 1-43 (201)
346 1cyd_A Carbonyl reductase; sho 23.0 1.3E+02 0.0045 25.6 5.9 36 10-51 5-40 (244)
347 2ixd_A LMBE-related protein; h 23.0 1.6E+02 0.0054 25.6 6.3 33 15-50 7-39 (242)
348 3orf_A Dihydropteridine reduct 22.8 80 0.0027 27.4 4.4 36 11-51 20-55 (251)
349 1lld_A L-lactate dehydrogenase 22.8 42 0.0015 30.5 2.6 37 9-52 4-42 (319)
350 3kcn_A Adenylate cyclase homol 22.8 1.3E+02 0.0045 23.1 5.4 48 369-425 75-123 (151)
351 3l77_A Short-chain alcohol deh 22.8 85 0.0029 26.8 4.5 34 13-51 2-35 (235)
352 2gas_A Isoflavone reductase; N 22.7 61 0.0021 29.0 3.7 34 12-51 2-35 (307)
353 2aef_A Calcium-gated potassium 22.5 35 0.0012 29.5 1.9 38 6-51 3-40 (234)
354 4ehi_A Bifunctional purine bio 22.5 83 0.0028 30.8 4.5 48 13-73 25-72 (534)
355 2c20_A UDP-glucose 4-epimerase 22.5 1E+02 0.0035 27.8 5.2 33 12-50 1-33 (330)
356 2ph1_A Nucleotide-binding prot 22.4 75 0.0026 27.8 4.1 38 12-51 17-56 (262)
357 4e3z_A Putative oxidoreductase 22.4 1E+02 0.0035 27.1 5.1 34 12-50 25-58 (272)
358 4e21_A 6-phosphogluconate dehy 22.3 55 0.0019 30.6 3.3 32 13-51 23-54 (358)
359 1dbw_A Transcriptional regulat 22.2 1.3E+02 0.0046 22.0 5.2 33 114-146 47-86 (126)
360 3c7a_A Octopine dehydrogenase; 22.2 39 0.0013 32.1 2.3 31 12-49 2-33 (404)
361 1sqs_A Conserved hypothetical 22.2 78 0.0027 27.4 4.1 36 12-49 1-40 (242)
362 1u0t_A Inorganic polyphosphate 22.1 35 0.0012 31.1 1.8 33 344-378 71-107 (307)
363 2fzv_A Putative arsenical resi 22.0 1.2E+02 0.0041 27.2 5.3 39 10-50 56-97 (279)
364 2i87_A D-alanine-D-alanine lig 21.8 62 0.0021 30.1 3.6 38 12-51 3-44 (364)
365 3bbn_B Ribosomal protein S2; s 21.8 56 0.0019 28.4 3.0 31 114-144 157-189 (231)
366 3cg4_A Response regulator rece 21.8 1.4E+02 0.0047 22.5 5.2 39 6-50 1-39 (142)
367 3e8x_A Putative NAD-dependent 21.7 1.2E+02 0.0042 25.7 5.4 35 11-51 20-54 (236)
368 3slg_A PBGP3 protein; structur 21.6 90 0.0031 28.8 4.8 36 10-51 22-58 (372)
369 3oh8_A Nucleoside-diphosphate 21.5 1.1E+02 0.0037 30.1 5.5 35 11-51 146-180 (516)
370 2x4g_A Nucleoside-diphosphate- 21.4 1.2E+02 0.0041 27.4 5.5 35 11-51 12-46 (342)
371 3goc_A Endonuclease V; alpha-b 21.3 40 0.0014 29.4 1.9 38 101-141 97-141 (237)
372 1hdo_A Biliverdin IX beta redu 21.2 1.5E+02 0.005 24.2 5.7 34 13-52 4-37 (206)
373 1z7e_A Protein aRNA; rossmann 21.2 1.1E+02 0.0038 31.2 5.6 95 13-145 1-107 (660)
374 3dqp_A Oxidoreductase YLBE; al 21.1 1.2E+02 0.0039 25.5 5.0 34 13-52 1-34 (219)
375 3pid_A UDP-glucose 6-dehydroge 21.1 63 0.0022 31.1 3.5 38 6-51 30-67 (432)
376 3c3m_A Response regulator rece 21.1 1.1E+02 0.0038 23.1 4.5 32 114-145 47-87 (138)
377 3tl4_X Glutaminyl-tRNA synthet 20.9 92 0.0032 26.0 4.0 67 384-462 102-174 (187)
378 1yt5_A Inorganic polyphosphate 20.9 31 0.0011 30.6 1.2 53 348-425 41-96 (258)
379 4fu0_A D-alanine--D-alanine li 20.9 66 0.0022 29.9 3.6 38 11-50 2-43 (357)
380 2vzf_A NADH-dependent FMN redu 20.9 1E+02 0.0036 25.5 4.6 37 12-50 2-42 (197)
381 3u5c_A 40S ribosomal protein S 20.9 74 0.0025 28.0 3.5 32 114-145 117-150 (252)
382 3r6w_A FMN-dependent NADH-azor 20.9 65 0.0022 27.3 3.2 39 12-50 1-43 (212)
383 3guy_A Short-chain dehydrogena 20.8 71 0.0024 27.2 3.5 34 13-51 1-34 (230)
384 2o3i_A Hypothetical protein; N 20.7 60 0.002 30.8 3.1 103 18-140 20-130 (405)
385 1y1p_A ARII, aldehyde reductas 20.7 1.5E+02 0.0051 26.7 6.0 40 6-51 5-44 (342)
386 1ydh_A AT5G11950; structural g 20.7 2.6E+02 0.009 23.8 7.0 44 334-378 89-143 (216)
387 2hpv_A FMN-dependent NADH-azor 20.7 85 0.0029 26.3 4.0 37 12-50 1-44 (208)
388 2zkq_b 40S ribosomal protein S 20.6 71 0.0024 28.8 3.4 32 114-145 118-151 (295)
389 1fy2_A Aspartyl dipeptidase; s 20.6 1.4E+02 0.0049 25.6 5.5 45 271-317 22-66 (229)
390 2xzm_B RPS0E; ribosome, transl 20.5 60 0.002 28.4 2.8 31 114-144 114-146 (241)
391 1ydh_A AT5G11950; structural g 20.4 1.4E+02 0.0047 25.6 5.1 40 10-51 7-50 (216)
392 4hn9_A Iron complex transport 20.4 81 0.0028 28.9 4.1 30 114-143 116-145 (335)
393 4e5v_A Putative THUA-like prot 20.4 1.4E+02 0.0047 26.8 5.4 39 10-51 2-43 (281)
394 3gem_A Short chain dehydrogena 20.4 74 0.0025 27.9 3.6 33 14-51 28-60 (260)
395 1jay_A Coenzyme F420H2:NADP+ o 20.3 75 0.0026 26.7 3.5 31 13-50 1-32 (212)
396 3l49_A ABC sugar (ribose) tran 20.3 4.2E+02 0.014 22.8 9.4 28 114-141 61-92 (291)
397 3f5d_A Protein YDEA; unknow pr 20.3 1.6E+02 0.0053 24.8 5.5 39 12-53 3-42 (206)
398 3ppi_A 3-hydroxyacyl-COA dehyd 20.2 1E+02 0.0036 27.1 4.7 33 14-51 31-63 (281)
399 4e5s_A MCCFLIKE protein (BA_56 20.2 1.5E+02 0.005 27.3 5.7 26 297-322 63-88 (331)
400 3g17_A Similar to 2-dehydropan 20.1 25 0.00084 31.8 0.4 32 13-51 3-34 (294)
401 3eod_A Protein HNR; response r 20.0 1.8E+02 0.0061 21.4 5.5 38 6-49 1-38 (130)
402 1o97_C Electron transferring f 20.0 1.3E+02 0.0043 26.7 5.0 39 101-144 104-148 (264)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.5e-68 Score=528.80 Aligned_cols=436 Identities=22% Similarity=0.369 Sum_probs=351.9
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCC--cEEEEEECccchhhhcCCC-CCCCCeEEEecCCCCCCchhh
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPN--VFITFVVTEEWLSFIGSGH-GNHNNIRFETIPNVIPSELVR 82 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rG--h~Vt~~~~~~~~~~~~~~~-~~~~~~~~~~ip~~~~~~~~~ 82 (471)
|++ .++.||+++|+|++||++|++.||+.|++ +| +.|||++++.+...+.+.. ....+++|..+|++++++.+.
T Consensus 8 M~~-~~~~hvv~~P~p~~GHi~P~l~Lak~L~~--~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~ 84 (454)
T 3hbf_A 8 MNG-NNLLHVAVLAFPFGTHAAPLLSLVKKIAT--EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVS 84 (454)
T ss_dssp -----CCCEEEEECCCSSSSHHHHHHHHHHHHH--HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCC
T ss_pred ccC-CCCCEEEEEcCCcccHHHHHHHHHHHHHh--CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccc
Confidence 443 33679999999999999999999999999 99 9999999987666554432 113479999999998775443
Q ss_pred hhcHHHHHHHHHHhchHHHHHHHHHhhhc-CCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhc
Q 012096 83 ARDFLAFVESVSTKMEAPFEKVLDFLQVE-APVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQN 161 (471)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (471)
..+....+..+...+...+++.++++..+ ..++|+||+|.+++|+..+|+++|||++.||+++++.++.+.++..+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 85 SGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 33333444444444445555655554221 24799999999999999999999999999999999999888887665543
Q ss_pred CCCCCCcccCCccccccCCCCCcCCcCCCCcccc-CCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCCC
Q 012096 162 GHFPVELSERGEEVVDYIPGLASTKLADLPTIFY-GSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFPF 240 (471)
Q Consensus 162 ~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~ 240 (471)
..... ........++||++++...+++.++. .....+.+...+..+...+++.+++||++++|+++++.+++ ..+
T Consensus 165 ~~~~~---~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~-~~~ 240 (454)
T 3hbf_A 165 TGSKE---VHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS-KFK 240 (454)
T ss_dssp CCHHH---HTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT-TSS
T ss_pred cCCCc---cccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh-cCC
Confidence 21110 00123345689998888899988765 23344566666667778889999999999999999999998 557
Q ss_pred CccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 012096 241 PVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSR 320 (471)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~ 320 (471)
++++|||++....... +..++++.+||+.++++++|||||||+...+.+++.+++.++++.+++|||+++
T Consensus 241 ~v~~vGPl~~~~~~~~----------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~ 310 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRK----------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFR 310 (454)
T ss_dssp CEEECCCHHHHSCCSC----------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECC
T ss_pred CEEEECCccccccccc----------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeC
Confidence 9999999986432210 023567899999988889999999999999999999999999999999999998
Q ss_pred CCC-----CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcc
Q 012096 321 GDT-----SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKI 395 (471)
Q Consensus 321 ~~~-----~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~ 395 (471)
++. +++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||||++|+++||+.||+++++.+|+
T Consensus 311 ~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~ 390 (454)
T 3hbf_A 311 GDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEI 390 (454)
T ss_dssp SCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCS
T ss_pred CcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCe
Confidence 752 445556678999999999999999999999999999999999999999999999999999999999976799
Q ss_pred eeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 396 GWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 396 G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
|+.++. ..+++++|.++|+++|+++.+ ++||+||+++++++++++++||||.+++++||++|.
T Consensus 391 Gv~l~~------~~~~~~~l~~av~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 391 GVGVDN------GVLTKESIKKALELTMSSEKG--GIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp EEECGG------GSCCHHHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred eEEecC------CCCCHHHHHHHHHHHHCCChH--HHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999986 458999999999999987322 589999999999999999999999999999999885
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.4e-63 Score=504.01 Aligned_cols=445 Identities=32% Similarity=0.553 Sum_probs=341.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCC-----CCCeEEEecCCCCCCc---hh
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGN-----HNNIRFETIPNVIPSE---LV 81 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~-----~~~~~~~~ip~~~~~~---~~ 81 (471)
++++||+++|+++.||++|++.||++|++ |||+|||++++.+...+.+.... ..+++|..+|++++.. ..
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~--rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~ 83 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHL--RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGD 83 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC-------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHh--CCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccC
Confidence 33579999999999999999999999999 99999999999887666543100 1279999999877652 11
Q ss_pred hhhcHHHHHHHHHHhchHHHHHHHHHhhhc--CCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHH
Q 012096 82 RARDFLAFVESVSTKMEAPFEKVLDFLQVE--APVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLV 159 (471)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~--~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 159 (471)
...++..++..+...+...++++++.+..+ ..+||+||+|.++.|+..+|+++|||++.+++++.+....+.+++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 163 (482)
T 2pq6_A 84 VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFV 163 (482)
T ss_dssp --CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHH
T ss_pred cchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHH
Confidence 223455566665577888899999988532 147999999999999999999999999999999988777666666666
Q ss_pred hcCCCCCCccc---C--CccccccCCCCCcCCcCCCCccccCC--CchHHHHHHHHhhccccccEEEEcchHHhhHHHHH
Q 012096 160 QNGHFPVELSE---R--GEEVVDYIPGLASTKLADLPTIFYGS--GRQTLQRALESVSKVSKAQCLLLSSVYELEAKVND 232 (471)
Q Consensus 160 ~~~~~p~~~~~---~--~~~~~~~ip~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 232 (471)
..++.|..... . .....+++|+++.+...+++.++... .....+......+...+.+.+++|+++++|++.++
T Consensus 164 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~ 243 (482)
T 2pq6_A 164 ERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVIN 243 (482)
T ss_dssp HTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHH
T ss_pred hcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHH
Confidence 66666654321 0 12334456776655556666554321 23344444444556678899999999999999999
Q ss_pred HHHhcCCCCccccccCCCC-cccc--cccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHH
Q 012096 233 TLKAKFPFPVYPIGPTIPY-FEIK--SNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVR 309 (471)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~ 309 (471)
.+++.+ +++++|||++.. .... ... .......|+.+.++.+||+.++++++|||||||+...+.+++.+++++|+
T Consensus 244 ~~~~~~-~~v~~VGPl~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 244 ALSSTI-PSIYPIGPLPSLLKQTPQIHQL-DSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHHTTC-TTEEECCCHHHHHHTSTTGGGG-CC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHhC-CcEEEEcCCccccccccccccc-ccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 999855 899999999863 2110 000 00000011234568899999888889999999999888888999999999
Q ss_pred hCCCcEEEEEcCCC---------CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccc
Q 012096 310 NSGVRFFWVSRGDT---------SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMM 380 (471)
Q Consensus 310 ~~~~~vi~~~~~~~---------~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~ 380 (471)
+.+++|||+++.+. +++..+.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.
T Consensus 322 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp HTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred hcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 99999999997531 222234568999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHH
Q 012096 381 DQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDA 460 (471)
Q Consensus 381 DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 460 (471)
||+.||+++++.+|+|+.++. .+++++|.++|+++|+|+.+ ++||+||+++++++++++.+||||.+++++
T Consensus 402 dQ~~na~~~~~~~G~g~~l~~-------~~~~~~l~~~i~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~ 472 (482)
T 2pq6_A 402 DQPTDCRFICNEWEIGMEIDT-------NVKREELAKLINEVIAGDKG--KKMKQKAMELKKKAEENTRPGGCSYMNLNK 472 (482)
T ss_dssp THHHHHHHHHHTSCCEEECCS-------SCCHHHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred chHHHHHHHHHHhCEEEEECC-------CCCHHHHHHHHHHHHcCCcH--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 999999999755599999873 26999999999999987211 379999999999999999999999999999
Q ss_pred HHHHHHh
Q 012096 461 FLNDISL 467 (471)
Q Consensus 461 ~~~~~~~ 467 (471)
|++++..
T Consensus 473 ~v~~~~~ 479 (482)
T 2pq6_A 473 VIKDVLL 479 (482)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9998854
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9.7e-62 Score=490.60 Aligned_cols=437 Identities=26% Similarity=0.422 Sum_probs=326.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCC-CcEEEEEECcc--chhhhcCCCCC-CCCeEEEecCCCCCCchhhhhc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNP-NVFITFVVTEE--WLSFIGSGHGN-HNNIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh~Vt~~~~~~--~~~~~~~~~~~-~~~~~~~~ip~~~~~~~~~~~~ 85 (471)
.+++||+++|+++.||++|+++||++|++ | ||+|||++++. +...+...... ..+++|..+|.+..++.....+
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~--r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVH--LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHH--HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHh--CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchh
Confidence 45579999999999999999999999999 8 99999999987 33433320000 1389999998653221111123
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCc-eEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCC
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVV-SAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHF 164 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~-D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (471)
+...+......+...++++++.+... .++ |+||+|.+..|+..+|+++|||++.+++++.+.++.+.+++........
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVEG-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSC 160 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHT-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhccC-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCC
Confidence 44444444556677788888876311 368 9999999988899999999999999999998877776666544433222
Q ss_pred CCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcC--CCCc
Q 012096 165 PVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKF--PFPV 242 (471)
Q Consensus 165 p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~~~~ 242 (471)
+... ......+|+++++...+++..+.......+..+........+..++++|+++++++..+...++.. .+++
T Consensus 161 ~~~~----~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v 236 (480)
T 2vch_A 161 EFRE----LTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 236 (480)
T ss_dssp CGGG----CSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCE
T ss_pred cccc----cCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcE
Confidence 1100 011224566655555556654432112334444444555667788999999999998877766411 3689
Q ss_pred cccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 012096 243 YPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGD 322 (471)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~ 322 (471)
++|||++....... .+..++++.+||+.++++++|||||||+...+.+++.+++++|++++++|||++++.
T Consensus 237 ~~vGpl~~~~~~~~---------~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~ 307 (480)
T 2vch_A 237 YPVGPLVNIGKQEA---------KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSP 307 (480)
T ss_dssp EECCCCCCCSCSCC--------------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEecccccccccc---------CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCc
Confidence 99999986532100 003467889999998888999999999998889999999999999999999999864
Q ss_pred C-------------CccccccCCCc--------eEee-ccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccc
Q 012096 323 T-------------SWFKDGCVDRG--------IVVP-WCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMM 380 (471)
Q Consensus 323 ~-------------~~~~~~~~~nv--------~v~~-~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~ 380 (471)
. ..+...+|+|+ +++. |+||.+||+|+++++||||||+||++||+++|||||++|+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~ 387 (480)
T 2vch_A 308 SGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYA 387 (480)
T ss_dssp CSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred cccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccc
Confidence 3 11223466775 5665 999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHH
Q 012096 381 DQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDA 460 (471)
Q Consensus 381 DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 460 (471)
||+.||+++++.+|+|+.++. . +.+.+++++|.++|+++|+++.+ ++||+||+++++++++++.+||+|..++++
T Consensus 388 DQ~~na~~l~~~~G~g~~l~~-~--~~~~~~~~~l~~av~~vl~~~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~~~~ 462 (480)
T 2vch_A 388 EQKMNAVLLSEDIRAALRPRA-G--DDGLVRREEVARVVKGLMEGEEG--KGVRNKMKELKEAACRVLKDDGTSTKALSL 462 (480)
T ss_dssp THHHHHHHHHHTTCCEECCCC-C--TTSCCCHHHHHHHHHHHHTSTHH--HHHHHHHHHHHHHHHHHTSTTSHHHHHHHH
T ss_pred cchHHHHHHHHHhCeEEEeec-c--cCCccCHHHHHHHHHHHhcCcch--HHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 999999998445699999976 2 11358999999999999984322 899999999999999999999999999999
Q ss_pred HHHHHHh
Q 012096 461 FLNDISL 467 (471)
Q Consensus 461 ~~~~~~~ 467 (471)
||+++..
T Consensus 463 ~v~~~~~ 469 (480)
T 2vch_A 463 VALKWKA 469 (480)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.3e-61 Score=486.67 Aligned_cols=440 Identities=23% Similarity=0.378 Sum_probs=323.1
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCc--EEEEEECccchhhhcCCCC--CCCCeEEEecCCCCCCchh
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNV--FITFVVTEEWLSFIGSGHG--NHNNIRFETIPNVIPSELV 81 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh--~Vt~~~~~~~~~~~~~~~~--~~~~~~~~~ip~~~~~~~~ 81 (471)
|+..++++||+++|+|+.||++|+++||+.|++ ||| .||+++++.+...+.+... ...++++..+++++++..+
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~--rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~ 78 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAA--AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYV 78 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHH--HCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHh--CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCccc
Confidence 666667889999999999999999999999999 765 5688888755544433111 0238999999987765322
Q ss_pred hhhcHHHHHHHHHHhchHHHHHHHHHhhhc-CCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHh
Q 012096 82 RARDFLAFVESVSTKMEAPFEKVLDFLQVE-APVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQ 160 (471)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~-~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 160 (471)
........+..+...+...++++++++..+ ..+||+||+|.++.|+..+|+++|||+|.+++++.+.+..+.+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 158 (456)
T 2c1x_A 79 FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE 158 (456)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHh
Confidence 111222333333333344455555443211 1479999999999899999999999999999998887766554443322
Q ss_pred cCCCCCCcccCCccccccCCCCCcCCcCCCCcccc-C-CCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcC
Q 012096 161 NGHFPVELSERGEEVVDYIPGLASTKLADLPTIFY-G-SGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKF 238 (471)
Q Consensus 161 ~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 238 (471)
..+.+.. .........++|+++.+...+++..+. . ....+.+...+......+.+.+++|+++++|++.++.+++.+
T Consensus 159 ~~~~~~~-~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~ 237 (456)
T 2c1x_A 159 KIGVSGI-QGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL 237 (456)
T ss_dssp HHCSSCC-TTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS
T ss_pred ccCCccc-ccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC
Confidence 2111110 001122334577876666666665332 1 111222233333344567899999999999999988888854
Q ss_pred CCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEE
Q 012096 239 PFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWV 318 (471)
Q Consensus 239 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~ 318 (471)
+++++|||++....... ++.+.++.+||+.++++++|||||||+...+.+++.++++++++.+++|||+
T Consensus 238 -~~~~~vGpl~~~~~~~~----------~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~ 306 (456)
T 2c1x_A 238 -KTYLNIGPFNLITPPPV----------VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWS 306 (456)
T ss_dssp -SCEEECCCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred -CCEEEecCcccCccccc----------ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEE
Confidence 79999999986432110 0223568899998888899999999999888888999999999999999999
Q ss_pred EcCCC-----CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhh
Q 012096 319 SRGDT-----SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDW 393 (471)
Q Consensus 319 ~~~~~-----~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l 393 (471)
++.+. +++..+.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++++.|
T Consensus 307 ~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~ 386 (456)
T 2c1x_A 307 LRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVL 386 (456)
T ss_dssp CCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTS
T ss_pred ECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHh
Confidence 98642 2333344679999999999999999999999999999999999999999999999999999999999777
Q ss_pred cceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHh
Q 012096 394 KIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISL 467 (471)
Q Consensus 394 G~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (471)
|+|+.++. ..+++++|.++|+++|+|+. +++||+||+++++++++++.+||||.+++++||+++..
T Consensus 387 g~g~~l~~------~~~~~~~l~~~i~~ll~~~~--~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 387 EIGVRIEG------GVFTKSGLMSCFDQILSQEK--GKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp CCEEECGG------GSCCHHHHHHHHHHHHHSHH--HHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred CeEEEecC------CCcCHHHHHHHHHHHHCCCc--HHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 99999976 45899999999999998732 24899999999999999999999999999999998854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=2.9e-60 Score=478.07 Aligned_cols=432 Identities=26% Similarity=0.469 Sum_probs=326.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCC--CcEEEEEECccch-----hhhcCCCCCCCCeEEEecCCCCCCchhh
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNP--NVFITFVVTEEWL-----SFIGSGHGNHNNIRFETIPNVIPSELVR 82 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~ip~~~~~~~~~ 82 (471)
++++||+++|+|+.||++|+++||+.|++ | ||+|||++++.+. ..+........+++|..+|++..++.+.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~--r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~ 84 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTN--HDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQEL 84 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHH--TCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGG
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHh--cCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcccc
Confidence 45689999999999999999999999999 8 9999999988653 2222100112389999999763222211
Q ss_pred hhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcC
Q 012096 83 ARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNG 162 (471)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (471)
.......+......+...++++++++.. .+||+||+|.++.|+..+|+++|||++.+++++.+.+..+.+++.....
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~--~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILS--NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCC--TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccC--CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 1111111334445667778888887621 3799999999998999999999999999999998877766655433211
Q ss_pred CCCCCcccCCccc---cccCCCC-CcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcC
Q 012096 163 HFPVELSERGEEV---VDYIPGL-ASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKF 238 (471)
Q Consensus 163 ~~p~~~~~~~~~~---~~~ip~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 238 (471)
.+... ... ...+|++ +++...+++..+... ...+.............+++++|+++++++...+..++..
T Consensus 162 -~~~~~----~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~ 235 (463)
T 2acv_A 162 -EVFDD----SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHD 235 (463)
T ss_dssp -CCCCC----SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHC
T ss_pred -CCCCC----ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhcc
Confidence 01000 111 3467777 665555565443311 2244444444555677888999999999999887766645
Q ss_pred --CCCccccccCCCCcc-cccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCc-CCCHHHHHHHHHHHHhCCCc
Q 012096 239 --PFPVYPIGPTIPYFE-IKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLW-SVSSVQMDEIVAGVRNSGVR 314 (471)
Q Consensus 239 --~~~~~~vGp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~-~~~~~~~~~~~~al~~~~~~ 314 (471)
++++++|||+..... ..... .|..+.++.+||+.++++++|||||||+. ..+.+++.+++++|++.+++
T Consensus 236 ~p~~~v~~vGpl~~~~~~~~~~~-------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~ 308 (463)
T 2acv_A 236 EKIPPIYAVGPLLDLKGQPNPKL-------DQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVR 308 (463)
T ss_dssp TTSCCEEECCCCCCSSCCCBTTB-------CHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCE
T ss_pred ccCCcEEEeCCCccccccccccc-------ccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCc
Confidence 678999999986532 10000 00124578899999888899999999999 78888899999999999999
Q ss_pred EEEEEcCC----CCcccccc--CCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhh
Q 012096 315 FFWVSRGD----TSWFKDGC--VDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKL 388 (471)
Q Consensus 315 vi~~~~~~----~~~~~~~~--~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 388 (471)
|||+++.+ ++++..+. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||++
T Consensus 309 ~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~ 388 (463)
T 2acv_A 309 FLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFR 388 (463)
T ss_dssp EEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHH
T ss_pred EEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHH
Confidence 99999874 23443344 6789999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcceeee-ecCCCCCCC--ccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHH
Q 012096 389 IVEDWKIGWKV-KKPEIGSES--LVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDI 465 (471)
Q Consensus 389 v~~~lG~G~~l-~~~~~~~~~--~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (471)
+++.+|+|+.+ +. . +.. .+++++|.++|+++|+++ ++||+||+++++++++++.+||||..++++||+++
T Consensus 389 lv~~~g~g~~l~~~-~--~~~~~~~~~~~l~~ai~~ll~~~----~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 461 (463)
T 2acv_A 389 LVKEWGVGLGLRVD-Y--RKGSDVVAAEEIEKGLKDLMDKD----SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDI 461 (463)
T ss_dssp HHHTSCCEEESCSS-C--CTTCCCCCHHHHHHHHHHHTCTT----CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred HHHHcCeEEEEecc-c--CCCCccccHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 63355999999 31 0 003 589999999999999632 69999999999999999999999999999999998
Q ss_pred H
Q 012096 466 S 466 (471)
Q Consensus 466 ~ 466 (471)
.
T Consensus 462 ~ 462 (463)
T 2acv_A 462 T 462 (463)
T ss_dssp H
T ss_pred c
Confidence 5
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.4e-45 Score=369.18 Aligned_cols=404 Identities=19% Similarity=0.183 Sum_probs=270.5
Q ss_pred ccccccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhh
Q 012096 3 HSRMKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVR 82 (471)
Q Consensus 3 ~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~ 82 (471)
.+..+..++||||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+... ++++..++..++.....
T Consensus 3 ~~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~--~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~ 75 (424)
T 2iya_A 3 SEHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVA--RGHRVSYAITDEFAAQVKAA-----GATPVVYDSILPKESNP 75 (424)
T ss_dssp --------CCCEEEEECCSCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHH-----TCEEEECCCCSCCTTCT
T ss_pred cccccCCcccceEEEEeCCCCcccchHHHHHHHHHH--CCCeEEEEeCHHHHHHHHhC-----CCEEEecCccccccccc
Confidence 334444566899999999999999999999999999 99999999999988888776 78999988655432111
Q ss_pred ----hhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHH
Q 012096 83 ----ARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELL 158 (471)
Q Consensus 83 ----~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 158 (471)
..+....+..+...+....+++.+.++. .+||+||+|.+..|+..+|+++|||++.+++.+..... +......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~ 152 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVPA 152 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-ccccccc
Confidence 1233333333333333444555555543 37999999998888999999999999999876642110 0000000
Q ss_pred HhcCCCCCCcccCCccccccCCCCCc--CCcCCCCccccCCCchHHHHHHHHh-------hccccccEEEEcchHHhhHH
Q 012096 159 VQNGHFPVELSERGEEVVDYIPGLAS--TKLADLPTIFYGSGRQTLQRALESV-------SKVSKAQCLLLSSVYELEAK 229 (471)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~ip~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~~~l~~~ 229 (471)
........ ... ...|.... ............ ............ ......+.+++++.++++++
T Consensus 153 ~~~~~~~~------~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~ 224 (424)
T 2iya_A 153 VQDPTADR------GEE-AAAPAGTGDAEEGAEAEDGLVR-FFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK 224 (424)
T ss_dssp GSCCCC----------------------------HHHHHH-HHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT
T ss_pred cccccccc------ccc-cccccccccchhhhccchhHHH-HHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC
Confidence 00000000 000 00000000 000000000000 000011111110 01114567888888888754
Q ss_pred HHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHH
Q 012096 230 VNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVR 309 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~ 309 (471)
...+++++++|||+..... ...+|++..+++++|||++||......+.+..++++++
T Consensus 225 -----~~~~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~ 281 (424)
T 2iya_A 225 -----GDTVGDNYTFVGPTYGDRS------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVD 281 (424)
T ss_dssp -----GGGCCTTEEECCCCCCCCG------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHT
T ss_pred -----ccCCCCCEEEeCCCCCCcc------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHh
Confidence 2347889999999764211 12357665556779999999998666788889999999
Q ss_pred hCCCcEEEEEcCCCC-ccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhh
Q 012096 310 NSGVRFFWVSRGDTS-WFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKL 388 (471)
Q Consensus 310 ~~~~~vi~~~~~~~~-~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 388 (471)
+.+++++|.++.... ......++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||++
T Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 282 GLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAER 359 (424)
T ss_dssp TCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred cCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHH
Confidence 989999998876431 111235789999999999999999998 99999999999999999999999999999999999
Q ss_pred hhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHH
Q 012096 389 IVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDI 465 (471)
Q Consensus 389 v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~ 465 (471)
+++. |+|+.++. ..+++++|.++|+++++| ++|+++++++++++++ .+++.+.++.+.+.+
T Consensus 360 l~~~-g~g~~~~~------~~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 360 IVEL-GLGRHIPR------DQVTAEKLREAVLAVASD-----PGVAERLAAVRQEIRE----AGGARAAADILEGIL 420 (424)
T ss_dssp HHHT-TSEEECCG------GGCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred HHHC-CCEEEcCc------CCCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHH
Confidence 9965 99999886 347999999999999998 8999999999999875 344455555444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3e-44 Score=356.63 Aligned_cols=349 Identities=15% Similarity=0.108 Sum_probs=229.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchh--------
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELV-------- 81 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~-------- 81 (471)
.+.|||+|+++|+.||++|+++||++|++ |||+|||++++.+.+... . ++.+..+.+.......
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~--rGh~Vt~~t~~~~~~~~~-~-----g~~~~~~~~~~~~~~~~~~~~~~~ 91 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRA--LGHEVRYATGGDIRAVAE-A-----GLCAVDVSPGVNYAKLFVPDDTDV 91 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEECSSTHHHHT-T-----TCEEEESSTTCCSHHHHSCCC---
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHH--CCCEEEEEeCcchhhHHh-c-----CCeeEecCCchhHhhhcccccccc
Confidence 45689999999999999999999999999 999999999988776543 3 6677776533321100
Q ss_pred ------hhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhh
Q 012096 82 ------RARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHF 155 (471)
Q Consensus 82 ------~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~ 155 (471)
.......+...+.......+.++++.++. .+||+||+|.++.++..+|+.+|||++.+...+..........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~ 169 (400)
T 4amg_A 92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL 169 (400)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH
T ss_pred ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH
Confidence 00011112222222233334444444443 2699999999999999999999999999755443211110000
Q ss_pred HHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhc-cccccEEEEcchHHhhHHHHHHH
Q 012096 156 ELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSK-VSKAQCLLLSSVYELEAKVNDTL 234 (471)
Q Consensus 156 ~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~l~~~~~~~~ 234 (471)
. .+............ .......+.......... .+
T Consensus 170 ~-----------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 205 (400)
T 4amg_A 170 I-----------------------------------------RRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL---LP 205 (400)
T ss_dssp H-----------------------------------------HHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT---SC
T ss_pred H-----------------------------------------HHHHHHHHHHhCCCcccccchhhcccCchhhcc---Cc
Confidence 0 00000000000000 111111121111111100 00
Q ss_pred HhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCC--HHHHHHHHHHHHhCC
Q 012096 235 KAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVS--SVQMDEIVAGVRNSG 312 (471)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~--~~~~~~~~~al~~~~ 312 (471)
.....+..+.+.+... .......+|++..+++++||||+||+.... ...+..+++++++.+
T Consensus 206 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 206 EDRRSPGAWPMRYVPY-----------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp GGGCCTTCEECCCCCC-----------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred ccccCCcccCcccccc-----------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 0001112222222211 123344568888888899999999998644 356788999999999
Q ss_pred CcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhh
Q 012096 313 VRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVED 392 (471)
Q Consensus 313 ~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 392 (471)
.++||..++.........|+|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++.
T Consensus 269 ~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~ 346 (400)
T 4amg_A 269 AEFVLTLGGGDLALLGELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL 346 (400)
T ss_dssp SEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH
T ss_pred ceEEEEecCccccccccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC
Confidence 999999987654444567899999999999999999988 999999999999999999999999999999999999966
Q ss_pred hcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHh
Q 012096 393 WKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEA 447 (471)
Q Consensus 393 lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~ 447 (471)
|+|+.++. ..+++ ++|+++|+| ++||+||+++++++++.
T Consensus 347 -G~g~~l~~------~~~~~----~al~~lL~d-----~~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 347 -GIGFDAEA------GSLGA----EQCRRLLDD-----AGLREAALRVRQEMSEM 385 (400)
T ss_dssp -TSEEECCT------TTCSH----HHHHHHHHC-----HHHHHHHHHHHHHHHTS
T ss_pred -CCEEEcCC------CCchH----HHHHHHHcC-----HHHHHHHHHHHHHHHcC
Confidence 99999987 33555 466788988 99999999999999863
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.5e-43 Score=349.83 Aligned_cols=379 Identities=14% Similarity=0.106 Sum_probs=251.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhh-hhcHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVR-ARDFLAFVE 91 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~-~~~~~~~~~ 91 (471)
|||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+... ++++..++......... .......+.
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~--~Gh~V~~~~~~~~~~~v~~~-----g~~~~~i~~~~~~~~~~~~~~~~~~~~ 73 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD--LGADVRMCAPPDCAERLAEV-----GVPHVPVGPSARAPIQRAKPLTAEDVR 73 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHT-----TCCEEECCC-------CCSCCCHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH--CCCeEEEEcCHHHHHHHHHc-----CCeeeeCCCCHHHHhhcccccchHHHH
Confidence 68999999999999999999999999 99999999999888777766 78899888543211000 001111111
Q ss_pred HHHH-hchHHHHHHHHHhhhcCCCceEEEEcC-chhh--HHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCCCC
Q 012096 92 SVST-KMEAPFEKVLDFLQVEAPVVSAIIVDT-FLAW--AVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFPVE 167 (471)
Q Consensus 92 ~~~~-~~~~~~~~ll~~l~~~~~~~D~vI~D~-~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (471)
.+.. .....++++.+. . .+||+||+|. +..| +..+|+++|||+|.+++.+.... ..+.|..
T Consensus 74 ~~~~~~~~~~~~~l~~~-~---~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~~p~~ 138 (415)
T 1iir_A 74 RFTTEAIATQFDEIPAA-A---EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPYYPPP 138 (415)
T ss_dssp HHHHHHHHHHHHHHHHH-T---TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSCCC
T ss_pred HHHHHHHHHHHHHHHHH-h---cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------CcccCCc
Confidence 1111 112233333321 1 4799999998 5678 89999999999999987764310 0011100
Q ss_pred cccCCccccccCCCCCcCCcCCCCcc-ccCCC-c---hHHHHHHHHhhc---------cccccEEEEcchHHhhH-HHHH
Q 012096 168 LSERGEEVVDYIPGLASTKLADLPTI-FYGSG-R---QTLQRALESVSK---------VSKAQCLLLSSVYELEA-KVND 232 (471)
Q Consensus 168 ~~~~~~~~~~~ip~~~~~~~~~l~~~-~~~~~-~---~~~~~~~~~~~~---------~~~~~~~~~~s~~~l~~-~~~~ 232 (471)
.. .. .+|+ ......+... ..... . ...+.....+.. .... ..+.++.+++++ +
T Consensus 139 ~~-----~~-~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~--- 206 (415)
T 1iir_A 139 PL-----GE-PSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ--- 206 (415)
T ss_dssp C-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC---
T ss_pred cC-----Cc-cccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC---
Confidence 00 00 0000 0000000000 00000 0 000011110000 0111 467788877764 2
Q ss_pred HHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCC
Q 012096 233 TLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSG 312 (471)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~ 312 (471)
++++ ++++|||+...... ..+.++.+|++..+ ++|||++||+. ...+.+..+++++++++
T Consensus 207 --~~~~--~~~~vG~~~~~~~~-------------~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 207 --PTDL--DAVQTGAWILPDER-------------PLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp --CCSS--CCEECCCCCCCCCC-------------CCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred --cccC--CeEeeCCCccCccc-------------CCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 2222 78999999875321 35667889997653 59999999998 56777888999999999
Q ss_pred CcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhh
Q 012096 313 VRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVED 392 (471)
Q Consensus 313 ~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 392 (471)
++++|.+++..... ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||..||+++++.
T Consensus 267 ~~~v~~~g~~~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~ 343 (415)
T 1iir_A 267 RRVILSRGWADLVL-PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL 343 (415)
T ss_dssp CCEEECTTCTTCCC-SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH
T ss_pred CeEEEEeCCCcccc-cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC
Confidence 99999887654222 335679999999999999977777 999999999999999999999999999999999999866
Q ss_pred hcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 393 WKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 393 lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
|+|+.++. ..++.++|.++|+++ +| ++|+++++++++++++ . .+.+.+.+.++.+.
T Consensus 344 -g~g~~~~~------~~~~~~~l~~~i~~l-~~-----~~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 344 -GVGVAHDG------PIPTFDSLSAALATA-LT-----PETHARATAVAGTIRT----D-GAAVAARLLLDAVS 399 (415)
T ss_dssp -TSEEECSS------SSCCHHHHHHHHHHH-TS-----HHHHHHHHHHHHHSCS----C-HHHHHHHHHHHHHH
T ss_pred -CCcccCCc------CCCCHHHHHHHHHHH-cC-----HHHHHHHHHHHHHHhh----c-ChHHHHHHHHHHHH
Confidence 99999886 347999999999999 87 8999999999988853 2 33344444454443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.1e-41 Score=335.10 Aligned_cols=383 Identities=15% Similarity=0.130 Sum_probs=264.9
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhh----h
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVR----A 83 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~----~ 83 (471)
-..+||||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+... ++.+..++...+..... .
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~--~Gh~V~v~~~~~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~~~ 88 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVR--RGHRVSYVTAGGFAEPVRAA-----GATVVPYQSEIIDADAAEVFGS 88 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHHT-----TCEEEECCCSTTTCCHHHHHHS
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHH--CCCEEEEEeCHHHHHHHHhc-----CCEEEeccccccccccchhhcc
Confidence 3467899999999999999999999999999 99999999999999888877 78999988554432110 0
Q ss_pred hcHHHHHHH-HHHhchHHHHHHHHHhhhcCCCceEEEEc-CchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhc
Q 012096 84 RDFLAFVES-VSTKMEAPFEKVLDFLQVEAPVVSAIIVD-TFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQN 161 (471)
Q Consensus 84 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~D~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (471)
......+.. +.......+.++.+.++. .+||+||+| ....++..+|+++|||++.+.+....... +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~----~------ 156 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH----Y------ 156 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS----C------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc----c------
Confidence 111112222 223333334455555544 379999999 67788889999999999998754321000 0
Q ss_pred CCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhh-------cccc-ccEEEEcchHHhhHHHHHH
Q 012096 162 GHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVS-------KVSK-AQCLLLSSVYELEAKVNDT 233 (471)
Q Consensus 162 ~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~s~~~l~~~~~~~ 233 (471)
.......+... ...+..+.. ....+........ .... .+..+....+++++.
T Consensus 157 -----------~~~~~~~~~~~----~~~p~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~---- 216 (415)
T 3rsc_A 157 -----------SFSQDMVTLAG----TIDPLDLPV-FRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA---- 216 (415)
T ss_dssp -----------CHHHHHHHHHT----CCCGGGCHH-HHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT----
T ss_pred -----------ccccccccccc----cCChhhHHH-HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC----
Confidence 00000000000 000000000 0000111111110 0011 145555554444432
Q ss_pred HHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCC
Q 012096 234 LKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGV 313 (471)
Q Consensus 234 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~ 313 (471)
+..++.++.++||+..... ...+|....+++++|||++||......+.+..+++++++.+.
T Consensus 217 -~~~~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 277 (415)
T 3rsc_A 217 -GDTFDDRFVFVGPCFDDRR------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPW 277 (415)
T ss_dssp -GGGCCTTEEECCCCCCCCG------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSC
T ss_pred -cccCCCceEEeCCCCCCcc------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCc
Confidence 4446778999999875321 123455444566799999999987777788889999999999
Q ss_pred cEEEEEcCCC-CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhh
Q 012096 314 RFFWVSRGDT-SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVED 392 (471)
Q Consensus 314 ~vi~~~~~~~-~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 392 (471)
+++|.++... .......++|+++.+|+|+.++|+++++ ||||||+||++||+++|+|+|++|...||+.||+++++.
T Consensus 278 ~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~ 355 (415)
T 3rsc_A 278 HVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL 355 (415)
T ss_dssp EEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH
T ss_pred EEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc
Confidence 9999888642 1122345789999999999999999999 999999999999999999999999999999999999977
Q ss_pred hcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 393 WKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 393 lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
|+|+.+.. ..+++++|.++|.++++| ++|+++++++++.+.+ ++++.+.++.+.+.+.
T Consensus 356 -g~g~~~~~------~~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 356 -GLGAVLPG------EKADGDTLLAAVGAVAAD-----PALLARVEAMRGHVRR----AGGAARAADAVEAYLA 413 (415)
T ss_dssp -TCEEECCG------GGCCHHHHHHHHHHHHTC-----HHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHH
T ss_pred -CCEEEccc------CCCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhh
Confidence 99999987 447999999999999998 8999999999999986 5666666666555443
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.7e-42 Score=342.61 Aligned_cols=376 Identities=14% Similarity=0.059 Sum_probs=254.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchh--hhhcHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELV--RARDFLAFV 90 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~--~~~~~~~~~ 90 (471)
|||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+... ++++..++........ ........+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~--~Gh~V~~~~~~~~~~~v~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA--LGVQTRMCAPPAAEERLAEV-----GVPHVPVGLPQHMMLQEGMPPPPPEEE 73 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHH-----TCCEEECSCCGGGCCCTTSCCCCHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH--CCCeEEEEeCHHHHHHHHHc-----CCeeeecCCCHHHHHhhccccchhHHH
Confidence 68999999999999999999999999 99999999999888877766 7888888854211000 001111111
Q ss_pred HHHHHhchHHHHHHHHHhhhcCCCceEEEEcCc-hhh--HHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCCCC
Q 012096 91 ESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTF-LAW--AVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFPVE 167 (471)
Q Consensus 91 ~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~-~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (471)
..+.. ....++++.+.....+||+||+|.+ ..+ +..+|+.+|||++.+++.+.... ....| +
T Consensus 74 ~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~~~~p-~ 138 (416)
T 1rrv_A 74 QRLAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------SPHLP-P 138 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSSSC-C
T ss_pred HHHHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------CcccC-C
Confidence 11111 1122333333210147999999974 467 88899999999999877653310 00011 0
Q ss_pred cccCCccccccCCCCCcCCcCCCCcccc-C-CC----c---hHHHHHHHHh---------hccccccEEEEcchHHhhHH
Q 012096 168 LSERGEEVVDYIPGLASTKLADLPTIFY-G-SG----R---QTLQRALESV---------SKVSKAQCLLLSSVYELEAK 229 (471)
Q Consensus 168 ~~~~~~~~~~~ip~~~~~~~~~l~~~~~-~-~~----~---~~~~~~~~~~---------~~~~~~~~~~~~s~~~l~~~ 229 (471)
..+ ++ .........+. . .. . ...+.....+ +..... .+++++.++++++
T Consensus 139 ----------~~~-~~-~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~ 205 (416)
T 1rrv_A 139 ----------AYD-EP-TTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL 205 (416)
T ss_dssp ----------CBC-SC-CCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC
T ss_pred ----------CCC-CC-CCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC
Confidence 000 00 00000000000 0 00 0 0000111110 001122 5778888877643
Q ss_pred HHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcC-CCHHHHHHHHHHH
Q 012096 230 VNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWS-VSSVQMDEIVAGV 308 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~-~~~~~~~~~~~al 308 (471)
++.+ ++++|||+...... ..+.++.+|++..+ ++|||++||+.. ...+.+..+++++
T Consensus 206 -----~~~~--~~~~vG~~~~~~~~-------------~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al 263 (416)
T 1rrv_A 206 -----QPDV--DAVQTGAWLLSDER-------------PLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAI 263 (416)
T ss_dssp -----CSSC--CCEECCCCCCCCCC-------------CCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHH
T ss_pred -----CCCC--CeeeECCCccCccC-------------CCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHH
Confidence 2212 78999999875321 34667888997653 589999999975 3456678899999
Q ss_pred HhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhh
Q 012096 309 RNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKL 388 (471)
Q Consensus 309 ~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 388 (471)
++.+++++|.+++..... ...++|+.+++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||++
T Consensus 264 ~~~~~~~v~~~g~~~~~~-~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 340 (416)
T 1rrv_A 264 RAQGRRVILSRGWTELVL-PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGR 340 (416)
T ss_dssp HHTTCCEEEECTTTTCCC-SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHH
T ss_pred HHCCCeEEEEeCCccccc-cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHH
Confidence 999999999988653222 345789999999999999988888 99999999999999999999999999999999999
Q ss_pred hhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 389 IVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 389 v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
+++. |+|+.++. ..++.++|.++|+++ +| ++|+++++++++++++ .++. +.++.+++.+.
T Consensus 341 l~~~-g~g~~~~~------~~~~~~~l~~~i~~l-~~-----~~~~~~~~~~~~~~~~----~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 341 VAAL-GIGVAHDG------PTPTFESLSAALTTV-LA-----PETRARAEAVAGMVLT----DGAA-AAADLVLAAVG 400 (416)
T ss_dssp HHHH-TSEEECSS------SCCCHHHHHHHHHHH-TS-----HHHHHHHHHHTTTCCC----CHHH-HHHHHHHHHHH
T ss_pred HHHC-CCccCCCC------CCCCHHHHHHHHHHh-hC-----HHHHHHHHHHHHHHhh----cCcH-HHHHHHHHHHh
Confidence 9966 99999876 347999999999999 88 8999999999988874 3333 44444424443
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=8.3e-40 Score=324.75 Aligned_cols=380 Identities=18% Similarity=0.155 Sum_probs=262.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCch----hhhhcH
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSEL----VRARDF 86 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~----~~~~~~ 86 (471)
+|+||+|+++++.||++|++.||++|++ +||+|+|++++.+.+.+... ++.+..++...+... ....+.
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~--~GheV~v~~~~~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~~~~~~ 75 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELAR--RGHRITYVTTPLFADEVKAA-----GAEVVLYKSEFDTFHVPEVVKQEDA 75 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHHHHT-----TCEEEECCCGGGTSSSSSSSCCTTH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHh--CCCEEEEEcCHHHHHHHHHc-----CCEEEecccccccccccccccccch
Confidence 4779999999999999999999999999 99999999999888888877 789998874332111 111223
Q ss_pred HHHHHH-HHHhchHHHHHHHHHhhhcCCCceEEEEc-CchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCC
Q 012096 87 LAFVES-VSTKMEAPFEKVLDFLQVEAPVVSAIIVD-TFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHF 164 (471)
Q Consensus 87 ~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~D~vI~D-~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (471)
...+.. +.......+.++.+.++. .+||+||+| .+..++..+|+++|||+|.+++........ .......
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~~~----- 147 (402)
T 3ia7_A 76 ETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHY-SLFKELW----- 147 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTB-CHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCccc-ccccccc-----
Confidence 333333 333333444555555544 379999999 777888899999999999986443220000 0000000
Q ss_pred CCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHh-------hcccc-ccEEEEcchHHhhHHHHHHHHh
Q 012096 165 PVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESV-------SKVSK-AQCLLLSSVYELEAKVNDTLKA 236 (471)
Q Consensus 165 p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~s~~~l~~~~~~~~~~ 236 (471)
..... ..+..+.. ............ ..... .+..+....+++++. ..
T Consensus 148 ------------~~~~~-------~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~ 202 (402)
T 3ia7_A 148 ------------KSNGQ-------RHPADVEA-VHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----AE 202 (402)
T ss_dssp ------------HHHTC-------CCGGGSHH-HHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----GG
T ss_pred ------------ccccc-------cChhhHHH-HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----cc
Confidence 00000 00000000 000001111100 00011 144454444444432 34
Q ss_pred cCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEE
Q 012096 237 KFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFF 316 (471)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi 316 (471)
.++.++.++||+..... ...+|+...+++++||+++||......+.+..+++++++.+.+++
T Consensus 203 ~~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 203 TFDERFAFVGPTLTGRD------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp GCCTTEEECCCCCCC----------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred cCCCCeEEeCCCCCCcc------------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 46778999999875321 122355445566799999999988777788899999999999999
Q ss_pred EEEcCCC-CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccc-cccccchhhhhhhhhc
Q 012096 317 WVSRGDT-SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPI-MMDQVPNSKLIVEDWK 394 (471)
Q Consensus 317 ~~~~~~~-~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~v~~~lG 394 (471)
|.++... .......++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|. ..||+.||+++++. |
T Consensus 265 ~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g 341 (402)
T 3ia7_A 265 MAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-G 341 (402)
T ss_dssp EECCTTSCGGGGCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-T
T ss_pred EEeCCcCChhhhCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-C
Confidence 9888642 1122345789999999999999999999 9999999999999999999999999 99999999999977 9
Q ss_pred ceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 395 IGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 395 ~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
+|+.+.. ..++++.|.++|.++++| ++++++++++++.+.+ ++++.+.++.+.+.+.
T Consensus 342 ~g~~~~~------~~~~~~~l~~~~~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 342 LGSVLRP------DQLEPASIREAVERLAAD-----SAVRERVRRMQRDILS----SGGPARAADEVEAYLG 398 (402)
T ss_dssp SEEECCG------GGCSHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHHH
T ss_pred CEEEccC------CCCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHhh----CChHHHHHHHHHHHHh
Confidence 9999987 447999999999999998 8999999999998875 5566666665555544
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.2e-39 Score=327.70 Aligned_cols=378 Identities=15% Similarity=0.101 Sum_probs=243.2
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCC-chh---
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPS-ELV--- 81 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~-~~~--- 81 (471)
......||||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+... ++.+..++..... ...
T Consensus 14 ~~~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~--~GheV~~~~~~~~~~~v~~~-----G~~~~~i~~~~~~~~~~~~~ 86 (441)
T 2yjn_A 14 LVPRGSHMRVVFSSMASKSHLFGLVPLAWAFRA--AGHEVRVVASPALTEDITAA-----GLTAVPVGTDVDLVDFMTHA 86 (441)
T ss_dssp -----CCCEEEEECCSCHHHHTTTHHHHHHHHH--TTCEEEEEECGGGHHHHHTT-----TCCEEECSCCCCHHHHHHHT
T ss_pred ccccCCccEEEEEcCCCcchHhHHHHHHHHHHH--CCCeEEEEeCchhHHHHHhC-----CCceeecCCccchHHHhhhh
Confidence 334567899999999999999999999999999 99999999999988888877 7899998854310 000
Q ss_pred -----------------hh-hcHH---HHHHHHHHh----c-hH-HHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhc
Q 012096 82 -----------------RA-RDFL---AFVESVSTK----M-EA-PFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRR 134 (471)
Q Consensus 82 -----------------~~-~~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~l 134 (471)
.. ..+. ..+...... . .. .+.++++.++. .+||+||+|.++.++..+|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~l 164 (441)
T 2yjn_A 87 GHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVT 164 (441)
T ss_dssp THHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHH
T ss_pred hcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHc
Confidence 00 0111 111111111 1 12 55665555543 2799999999778899999999
Q ss_pred CCCeEEEecchHHHHHHHHhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhc---
Q 012096 135 NIPVASFWSMSASLFSVFHHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSK--- 211 (471)
Q Consensus 135 gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--- 211 (471)
|||+|.+...+.........+.. ...+.|... .... ....+......+..
T Consensus 165 giP~v~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~------~~~~----~~~~l~~~~~~~g~~~~ 217 (441)
T 2yjn_A 165 GTPHARLLWGPDITTRARQNFLG-----------------LLPDQPEEH------REDP----LAEWLTWTLEKYGGPAF 217 (441)
T ss_dssp TCCEEEECSSCCHHHHHHHHHHH-----------------HGGGSCTTT------CCCH----HHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEecCCCcchhhhhhhhh-----------------hcccccccc------ccch----HHHHHHHHHHHcCCCCC
Confidence 99999986544321110000000 000111100 0000 00111111111111
Q ss_pred ---cccccEEEEcchHHhhHHHHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEE
Q 012096 212 ---VSKAQCLLLSSVYELEAKVNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYV 288 (471)
Q Consensus 212 ---~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~v 288 (471)
....+..+.+..+.++++ . +++. ..+++... ..+.++.+|++..+++++|||
T Consensus 218 ~~~~~~~~~~l~~~~~~~~~~-----~-~~~~--~~~~~~~~-----------------~~~~~~~~~l~~~~~~~~v~v 272 (441)
T 2yjn_A 218 DEEVVVGQWTIDPAPAAIRLD-----T-GLKT--VGMRYVDY-----------------NGPSVVPEWLHDEPERRRVCL 272 (441)
T ss_dssp CGGGTSCSSEEECSCGGGSCC-----C-CCCE--EECCCCCC-----------------CSSCCCCGGGSSCCSSCEEEE
T ss_pred CccccCCCeEEEecCccccCC-----C-CCCC--CceeeeCC-----------------CCCcccchHhhcCCCCCEEEE
Confidence 001233444333333310 0 0110 11111110 112345678876666779999
Q ss_pred EeCCCcCC---CHHHHHHHHHHHHhCCCcEEEEEcCCC-CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHH
Q 012096 289 SLGSLWSV---SSVQMDEIVAGVRNSGVRFFWVSRGDT-SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTL 364 (471)
Q Consensus 289 s~GS~~~~---~~~~~~~~~~al~~~~~~vi~~~~~~~-~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~ 364 (471)
++||+... ..+.+..+++++++.++++||..++.. +.+ ...++|+++.+|+||.++|+.+++ ||||||+||++
T Consensus 273 ~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~ 349 (441)
T 2yjn_A 273 TLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGV-ANIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWH 349 (441)
T ss_dssp EC----------CCSTTTTHHHHHTSSSEEEECCCTTTTSSC-SSCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHH
T ss_pred ECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhh-ccCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHH
Confidence 99999864 335567788999999999999888643 222 235789999999999999988888 99999999999
Q ss_pred HHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 012096 365 EAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEIC 444 (471)
Q Consensus 365 eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~ 444 (471)
||+++|||+|++|...||+.||+++++. |+|+.++. ..+++++|.++|.++++| ++|+++++++++++
T Consensus 350 Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~------~~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~ 417 (441)
T 2yjn_A 350 TAAIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPV------PELTPDQLRESVKRVLDD-----PAHRAGAARMRDDM 417 (441)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT------TTCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHH
T ss_pred HHHHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEccc------ccCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHHH
Confidence 9999999999999999999999999976 99999987 447999999999999998 89999999999998
Q ss_pred HHhHhcCCCcHHHHHHHHH
Q 012096 445 QEAVAENGSSITNFDAFLN 463 (471)
Q Consensus 445 ~~~~~~~g~~~~~~~~~~~ 463 (471)
++ .++..+.++.+.+
T Consensus 418 ~~----~~~~~~~~~~i~~ 432 (441)
T 2yjn_A 418 LA----EPSPAEVVGICEE 432 (441)
T ss_dssp HT----SCCHHHHHHHHHH
T ss_pred Hc----CCCHHHHHHHHHH
Confidence 75 4444454444443
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=7e-41 Score=332.50 Aligned_cols=354 Identities=14% Similarity=0.073 Sum_probs=243.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchh-hhhcHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELV-RARDFLAFVE 91 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~-~~~~~~~~~~ 91 (471)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.++.. ++.+..++........ ..........
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~--~Gh~V~v~~~~~~~~~v~~~-----g~~~~~l~~~~~~~~~~~~~~~~~~~~ 73 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE--LGADARMCLPPDYVERCAEV-----GVPMVPVGRAVRAGAREPGELPPGAAE 73 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH--TTCCEEEEECGGGHHHHHHT-----TCCEEECSSCSSGGGSCTTCCCTTCGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH--CCCeEEEEeCHHHHHHHHHc-----CCceeecCCCHHHHhccccCCHHHHHH
Confidence 68999999999999999999999999 99999999999999998877 7888888744321100 0000001111
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhH---HHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCCCCc
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWA---VDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFPVEL 168 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (471)
.+.......++++.+.+. +||+||+|.....+ ..+|+++|||++.+...+....+...+.
T Consensus 74 ~~~~~~~~~~~~l~~~~~----~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~------------- 136 (404)
T 3h4t_A 74 VVTEVVAEWFDKVPAAIE----GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQA------------- 136 (404)
T ss_dssp GHHHHHHHHHHHHHHHHT----TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHH-------------
T ss_pred HHHHHHHHHHHHHHHHhc----CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHH-------------
Confidence 111222222333333332 69999998665333 7899999999999877664210000000
Q ss_pred ccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhc--------cccccEEEEcchHHhhHHHHHHHHhcCCC
Q 012096 169 SERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSK--------VSKAQCLLLSSVYELEAKVNDTLKAKFPF 240 (471)
Q Consensus 169 ~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~s~~~l~~~~~~~~~~~~~~ 240 (471)
..+. ......+......+........ ....+..+++..+.+.+ .+.+++
T Consensus 137 ----------~~~~-------~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p------~~~~~~ 193 (404)
T 3h4t_A 137 ----------ERDM-------YNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSP------LRPTDL 193 (404)
T ss_dssp ----------HHHH-------HHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC------CCTTCC
T ss_pred ----------HHHH-------HHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeC------CCCCCC
Confidence 0000 0000000000000000000000 00011223344444432 222567
Q ss_pred CccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 012096 241 PVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSR 320 (471)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~ 320 (471)
++.++|++..+... ..++++.+|++.. +++|||++||+.. ..+.+..+++++++.++++||..+
T Consensus 194 ~~~~~G~~~~~~~~-------------~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g 257 (404)
T 3h4t_A 194 GTVQTGAWILPDQR-------------PLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSG 257 (404)
T ss_dssp SCCBCCCCCCCCCC-------------CCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECT
T ss_pred CeEEeCccccCCCC-------------CCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeC
Confidence 88999988764321 4677888898754 4599999999987 677888899999999999999988
Q ss_pred CCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeee
Q 012096 321 GDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVK 400 (471)
Q Consensus 321 ~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~ 400 (471)
+..... ...++|+++.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+..||+.||+++++. |+|+.++
T Consensus 258 ~~~~~~-~~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~ 333 (404)
T 3h4t_A 258 WAGLGR-IDEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHD 333 (404)
T ss_dssp TTTCCC-SSCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECS
T ss_pred Cccccc-ccCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccC
Confidence 653222 234689999999999999998888 999999999999999999999999999999999999976 9999998
Q ss_pred cCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH
Q 012096 401 KPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQ 445 (471)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~ 445 (471)
. ..+++++|.++|+++++ ++|+++++++++.++
T Consensus 334 ~------~~~~~~~l~~ai~~ll~------~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 334 G------PTPTVESLSAALATALT------PGIRARAAAVAGTIR 366 (404)
T ss_dssp S------SSCCHHHHHHHHHHHTS------HHHHHHHHHHHTTCC
T ss_pred c------CCCCHHHHHHHHHHHhC------HHHHHHHHHHHHHHh
Confidence 7 44799999999999996 589999999998875
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=6.9e-39 Score=321.20 Aligned_cols=381 Identities=17% Similarity=0.180 Sum_probs=255.2
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchh----
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELV---- 81 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~---- 81 (471)
|+..++||||+|+++++.||++|+++|+++|++ +||+|+++++..+.+.+... ++.+..+|...+....
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~--~G~~V~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~ 73 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVA--RGHRVTYAIPPVFADKVAAT-----GPRPVLYHSTLPGPDADPEA 73 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHTT-----SCEEEECCCCSCCTTSCGGG
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHH--CCCeEEEEeCHHHHHHHHhC-----CCEEEEcCCcCccccccccc
Confidence 455556789999999999999999999999999 99999999999887777766 7889888865432111
Q ss_pred hhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhc
Q 012096 82 RARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQN 161 (471)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (471)
...++...+..+...+...+..+.+.++. .+||+||+|.+..++..+|+++|||+|.+++.+...............
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~- 150 (430)
T 2iyf_A 74 WGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW- 150 (430)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH-
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh-
Confidence 01233333333323333344445554443 379999999877788899999999999988654310000000000000
Q ss_pred CCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHh-------hccccccEEEEcchHHhhHHHHHHH
Q 012096 162 GHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESV-------SKVSKAQCLLLSSVYELEAKVNDTL 234 (471)
Q Consensus 162 ~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~~~l~~~~~~~~ 234 (471)
.... ..++.. .+. .......... ......+.++.++.+++++.
T Consensus 151 -----------~~~~-~~~~~~--------~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 151 -----------REPR-QTERGR--------AYY-----ARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp -----------HHHH-HSHHHH--------HHH-----HHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----
T ss_pred -----------hhhc-cchHHH--------HHH-----HHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----
Confidence 0000 000000 000 0001111100 01113567788887777653
Q ss_pred HhcCCCC-ccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-C
Q 012096 235 KAKFPFP-VYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-G 312 (471)
Q Consensus 235 ~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-~ 312 (471)
...++++ ++++||...... ...+|....+++++||+++||......+.+..+++++++. +
T Consensus 201 ~~~~~~~~v~~vG~~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~ 262 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDRA------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPG 262 (430)
T ss_dssp GGGSCTTTEEECCCCC-----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTT
T ss_pred cccCCCccEEEeCCcCCCCC------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCC
Confidence 1236677 999998654211 0124554445677999999999855567788899999886 7
Q ss_pred CcEEEEEcCCC--CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhh
Q 012096 313 VRFFWVSRGDT--SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIV 390 (471)
Q Consensus 313 ~~vi~~~~~~~--~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~ 390 (471)
++++|.++... +.+ ...++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..+||..|+++++
T Consensus 263 ~~~~~~~G~~~~~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~ 339 (430)
T 2iyf_A 263 WHLVLQIGRKVTPAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQ 339 (430)
T ss_dssp EEEEEECC---CGGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred eEEEEEeCCCCChHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHH
Confidence 89989887643 222 235679999999999999999998 9999999999999999999999999999999999999
Q ss_pred hhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHH
Q 012096 391 EDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLN 463 (471)
Q Consensus 391 ~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (471)
+. |+|+.++. ..++.++|.++|.++++| +.+++++.++++++.+. ++..+.++.+.+
T Consensus 340 ~~-g~g~~~~~------~~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~ 396 (430)
T 2iyf_A 340 GL-GVARKLAT------EEATADLLRETALALVDD-----PEVARRLRRIQAEMAQE----GGTRRAADLIEA 396 (430)
T ss_dssp HT-TSEEECCC------C-CCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHH----CHHHHHHHHHHT
T ss_pred Hc-CCEEEcCC------CCCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHhc----CcHHHHHHHHHH
Confidence 66 99999886 347999999999999988 89999999999988763 344444444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.2e-38 Score=309.54 Aligned_cols=359 Identities=12% Similarity=0.079 Sum_probs=250.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCch-----------h
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSEL-----------V 81 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~-----------~ 81 (471)
|||++++.++.||++|+++|+++|++ +||+|++++++.+.+.+... ++.+..++....... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~--~Gh~V~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN--AGHQVVMAANQDMGPVVTGV-----GLPAVATTDLPIRHFITTDREGRPEAI 73 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHT-----TCCEEESCSSCHHHHHHBCTTSCBCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH--CCCEEEEEeCHHHHHHHHhC-----CCEEEEeCCcchHHHHhhhcccCcccc
Confidence 68999999999999999999999999 99999999998877777666 778888875331000 0
Q ss_pred -hhhcHHHHH-HH-HHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHH
Q 012096 82 -RARDFLAFV-ES-VSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELL 158 (471)
Q Consensus 82 -~~~~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 158 (471)
........+ .. +...+...+.++.+.++. .+||+||+|.+..++..+|+.+|||++.++..+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~----------- 140 (384)
T 2p6p_A 74 PSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD----------- 140 (384)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC-----------
T ss_pred CcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc-----------
Confidence 000111111 11 112222334444444443 26999999987778888999999999987532110
Q ss_pred HhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhh--ccccccEEEEcchHHhhHHHHHHHHh
Q 012096 159 VQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVS--KVSKAQCLLLSSVYELEAKVNDTLKA 236 (471)
Q Consensus 159 ~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~~~~~~~~ 236 (471)
. .++ ...+. ...+.....+. .....+.++.++.+.++++ ++
T Consensus 141 -----------------~---~~~--------~~~~~----~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~ 183 (384)
T 2p6p_A 141 -----------------A---DGI--------HPGAD----AELRPELSELGLERLPAPDLFIDICPPSLRPA-----NA 183 (384)
T ss_dssp -----------------C---TTT--------HHHHH----HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT-----TS
T ss_pred -----------------c---chh--------hHHHH----HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC-----CC
Confidence 0 000 00000 00111111110 1111467788887766632 11
Q ss_pred cCC-CCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCC-----CHHHHHHHHHHHHh
Q 012096 237 KFP-FPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSV-----SSVQMDEIVAGVRN 310 (471)
Q Consensus 237 ~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~-----~~~~~~~~~~al~~ 310 (471)
++ .++.+++ .. .+.++.+|++..+++++|||++||.... ..+.+..+++++++
T Consensus 184 -~~~~~~~~~~-~~-------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~ 242 (384)
T 2p6p_A 184 -APARMMRHVA-TS-------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR 242 (384)
T ss_dssp -CCCEECCCCC-CC-------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT
T ss_pred -CCCCceEecC-CC-------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhc
Confidence 22 1233332 10 1123456877655667999999999875 45678889999999
Q ss_pred CCCcEEEEEcCCC-CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhh
Q 012096 311 SGVRFFWVSRGDT-SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLI 389 (471)
Q Consensus 311 ~~~~vi~~~~~~~-~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v 389 (471)
.+++++|+.++.. +.+ ...++|+.+ +|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||..||+++
T Consensus 243 ~~~~~~~~~g~~~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~ 318 (384)
T 2p6p_A 243 WDVELIVAAPDTVAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRV 318 (384)
T ss_dssp TTCEEEEECCHHHHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHH
Confidence 9999999887531 111 235789999 99999999998888 999999999999999999999999999999999999
Q ss_pred hhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHhhc
Q 012096 390 VEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISLAH 469 (471)
Q Consensus 390 ~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 469 (471)
++. |+|+.++. ..++.++|.++|+++++| ++|+++++++++++++ .++..+.++.+.+.+.-+|
T Consensus 319 ~~~-g~g~~~~~------~~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 319 ADY-GAAIALLP------GEDSTEAIADSCQELQAK-----DTYARRAQDLSREISG----MPLPATVVTALEQLAHHHH 382 (384)
T ss_dssp HHH-TSEEECCT------TCCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCCHHHHHHHHHHHHHHHC
T ss_pred HHC-CCeEecCc------CCCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHh----CCCHHHHHHHHHHHhhhcc
Confidence 966 99999886 347999999999999998 8999999999999986 5566666766666665543
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=2.7e-36 Score=299.19 Aligned_cols=353 Identities=14% Similarity=0.132 Sum_probs=234.5
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCc------
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSE------ 79 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~------ 79 (471)
.....++|||+|++.++.||++|+++|+++|++ +||+|+++++ .+.+.+... ++.+..++......
T Consensus 14 ~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~--~GheV~v~~~-~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~ 85 (398)
T 3oti_A 14 GHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRT--AGHDVLIAVA-EHADRAAAA-----GLEVVDVAPDYSAVKVFEQV 85 (398)
T ss_dssp -----CCCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEES-SCHHHHHTT-----TCEEEESSTTCCHHHHHHHH
T ss_pred cchhhhcCEEEEEcCCCcchHhHHHHHHHHHHH--CCCEEEEecc-chHHHHHhC-----CCeeEecCCccCHHHHhhhc
Confidence 344456789999999999999999999999999 9999999999 888888877 88999988432100
Q ss_pred ---------------hhhhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecc
Q 012096 80 ---------------LVRARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 80 ---------------~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~ 144 (471)
..........+......+...+.+++++. +||+||+|....++..+|+.+|||+|.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~ 160 (398)
T 3oti_A 86 AKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-----RPDLVVYEQGATVGLLAADRAGVPAVQRNQS 160 (398)
T ss_dssp HHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred ccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence 00011122222222222223344444443 6999999987788889999999999986533
Q ss_pred hHHHHHHHHhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHh-hccccccEEEEcch
Q 012096 145 SASLFSVFHHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESV-SKVSKAQCLLLSSV 223 (471)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~ 223 (471)
..... .. ..... .........+ ......+..+....
T Consensus 161 ~~~~~-------------------------------~~--------~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 3oti_A 161 AWRTR-------------------------------GM--------HRSIA----SFLTDLMDKHQVSLPEPVATIESFP 197 (398)
T ss_dssp TCCCT-------------------------------TH--------HHHHH----TTCHHHHHHTTCCCCCCSEEECSSC
T ss_pred CCCcc-------------------------------ch--------hhHHH----HHHHHHHHHcCCCCCCCCeEEEeCC
Confidence 21100 00 00000 0000011100 00111233333332
Q ss_pred HHhhHHHHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCC--CHHHH
Q 012096 224 YELEAKVNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSV--SSVQM 301 (471)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~--~~~~~ 301 (471)
+.+..+ . ......+... +. ..+....+|+...+++++|||++||.... ..+.+
T Consensus 198 ~~~~~~-----~---~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~ 252 (398)
T 3oti_A 198 PSLLLE-----A---EPEGWFMRWV-PY----------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAV 252 (398)
T ss_dssp GGGGTT-----S---CCCSBCCCCC-CC----------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGH
T ss_pred HHHCCC-----C---CCCCCCcccc-CC----------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHH
Confidence 222211 0 0011111100 00 01223445666566677999999999653 45678
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceeccccccc
Q 012096 302 DEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMD 381 (471)
Q Consensus 302 ~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~D 381 (471)
..+++++++.+++++|+.++.........++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 253 ~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 253 EPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp HHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred HHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 88999999999999999887543222345789999999999999999988 9999999999999999999999999999
Q ss_pred ccchh--hhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHH
Q 012096 382 QVPNS--KLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFD 459 (471)
Q Consensus 382 Q~~na--~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~ 459 (471)
|..|| .++++. |+|+.++. ..++++.|. ++++| ++|+++++++++++.+ ..+..+.++
T Consensus 331 q~~~a~~~~~~~~-g~g~~~~~------~~~~~~~l~----~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~ 390 (398)
T 3oti_A 331 QFQHTAREAVSRR-GIGLVSTS------DKVDADLLR----RLIGD-----ESLRTAAREVREEMVA----LPTPAETVR 390 (398)
T ss_dssp CSSCTTHHHHHHH-TSEEECCG------GGCCHHHHH----HHHHC-----HHHHHHHHHHHHHHHT----SCCHHHHHH
T ss_pred hHHHHHHHHHHHC-CCEEeeCC------CCCCHHHHH----HHHcC-----HHHHHHHHHHHHHHHh----CCCHHHHHH
Confidence 99999 999976 99999987 346887776 78888 9999999999999875 444444444
Q ss_pred HH
Q 012096 460 AF 461 (471)
Q Consensus 460 ~~ 461 (471)
.+
T Consensus 391 ~l 392 (398)
T 3oti_A 391 RI 392 (398)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=6.6e-37 Score=303.66 Aligned_cols=350 Identities=11% Similarity=0.068 Sum_probs=220.3
Q ss_pred ccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCc-------
Q 012096 7 KATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSE------- 79 (471)
Q Consensus 7 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~------- 79 (471)
..+..+|||+|++.++.||++|++.|+++|++ +||+|++++++.+.+.+... ++.+..++......
T Consensus 10 ~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~--~GheV~v~~~~~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~~ 82 (398)
T 4fzr_A 10 VPRGSHMRILVIAGCSEGFVMPLVPLSWALRA--AGHEVLVAASENMGPTVTGA-----GLPFAPTCPSLDMPEVLSWDR 82 (398)
T ss_dssp -----CCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEEEGGGHHHHHHT-----TCCEEEEESSCCHHHHHSBCT
T ss_pred CCCCCceEEEEEcCCCcchHHHHHHHHHHHHH--CCCEEEEEcCHHHHHHHHhC-----CCeeEecCCccchHhhhhhhc
Confidence 45566799999999999999999999999999 99999999998888888777 67777776321100
Q ss_pred --------hhhhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHH
Q 012096 80 --------LVRARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSV 151 (471)
Q Consensus 80 --------~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~ 151 (471)
.............+.......+.++.+.++. .+||+||+|....++..+|+.+|||+|.+..........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 83 EGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp TSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred cCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 0000011111122222223334444444433 269999999877888889999999999876543211000
Q ss_pred HHhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhh--ccccccEEEEcchHHhhHH
Q 012096 152 FHHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVS--KVSKAQCLLLSSVYELEAK 229 (471)
Q Consensus 152 ~~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~ 229 (471)
.... ...+......+. .....+..+....+.+...
T Consensus 161 ~~~~-------------------------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T 4fzr_A 161 KSAG-------------------------------------------VGELAPELAELGLTDFPDPLLSIDVCPPSMEAQ 197 (398)
T ss_dssp HHHH-------------------------------------------HHHTHHHHHTTTCSSCCCCSEEEECSCGGGC--
T ss_pred hHHH-------------------------------------------HHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC
Confidence 0000 000000000000 0111223333333333321
Q ss_pred HHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCC--------CHHHH
Q 012096 230 VNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSV--------SSVQM 301 (471)
Q Consensus 230 ~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~--------~~~~~ 301 (471)
.......+.++++. .....+.+|+...+++++|||++||.... ....+
T Consensus 198 -----~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~ 253 (398)
T 4fzr_A 198 -----PKPGTTKMRYVPYN-------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLL 253 (398)
T ss_dssp -------CCCEECCCCCCC-------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSH
T ss_pred -----CCCCCCCeeeeCCC-------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHH
Confidence 00000011122110 01233455666555677999999999753 33557
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceeccccccc
Q 012096 302 DEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMD 381 (471)
Q Consensus 302 ~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~D 381 (471)
..+++++.+.+++++|..++.........++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...|
T Consensus 254 ~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~ 331 (398)
T 4fzr_A 254 QALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAE 331 (398)
T ss_dssp HHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGG
T ss_pred HHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchh
Confidence 88999999999999998876542222345789999999999999999998 9999999999999999999999999999
Q ss_pred ccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 012096 382 QVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQE 446 (471)
Q Consensus 382 Q~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~ 446 (471)
|+.|+.++++. |+|+.++. ..++++.|.++|.++++| ++|++++.+.++.+.+
T Consensus 332 q~~~a~~~~~~-g~g~~~~~------~~~~~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 332 VWDSARLLHAA-GAGVEVPW------EQAGVESVLAACARIRDD-----SSYVGNARRLAAEMAT 384 (398)
T ss_dssp GHHHHHHHHHT-TSEEECC-------------CHHHHHHHHHHC-----THHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHc-CCEEecCc------ccCCHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHc
Confidence 99999999977 99999987 347899999999999998 8999999999998875
No 18
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.3e-32 Score=274.00 Aligned_cols=363 Identities=13% Similarity=0.093 Sum_probs=241.4
Q ss_pred ccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCC--------
Q 012096 7 KATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPS-------- 78 (471)
Q Consensus 7 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~-------- 78 (471)
+....+|||+|++.++.||++|+++|+++|++ +||+|++++++...+.+... ++.+..++.....
T Consensus 15 ~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~--~GheV~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~ 87 (412)
T 3otg_A 15 HIEGRHMRVLFASLGTHGHTYPLLPLATAARA--AGHEVTFATGEGFAGTLRKL-----GFEPVATGMPVFDGFLAALRI 87 (412)
T ss_dssp ---CCSCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHHT-----TCEEEECCCCHHHHHHHHHHH
T ss_pred CcccceeEEEEEcCCCcccHHHHHHHHHHHHH--CCCEEEEEccHHHHHHHHhc-----CCceeecCcccccchhhhhhh
Confidence 34566799999999999999999999999999 99999999998877777766 7888888741000
Q ss_pred -----------chhhhhcHHHHHHHH-HHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchH
Q 012096 79 -----------ELVRARDFLAFVESV-STKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSA 146 (471)
Q Consensus 79 -----------~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~ 146 (471)
.......+...+... .......+..++++. +||+||+|....++..+|+.+|||+|.+.....
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-----~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~ 162 (412)
T 3otg_A 88 RFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-----RPDLVVQEISNYGAGLAALKAGIPTICHGVGRD 162 (412)
T ss_dssp HHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-----CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCC
T ss_pred hhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-----CCCEEEECchhhHHHHHHHHcCCCEEEeccccc
Confidence 000111122222211 111112333444443 699999997777788899999999998644321
Q ss_pred HHHHHHHhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhh-------ccccccEEE
Q 012096 147 SLFSVFHHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVS-------KVSKAQCLL 219 (471)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 219 (471)
........ ............. .....+..+
T Consensus 163 ~~~~~~~~-------------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~d~~i 199 (412)
T 3otg_A 163 TPDDLTRS-------------------------------------------IEEEVRGLAQRLGLDLPPGRIDGFGNPFI 199 (412)
T ss_dssp CCSHHHHH-------------------------------------------HHHHHHHHHHHTTCCCCSSCCGGGGCCEE
T ss_pred CchhhhHH-------------------------------------------HHHHHHHHHHHcCCCCCcccccCCCCeEE
Confidence 10000000 0000000000000 012334444
Q ss_pred EcchHHhhHHHHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccc-cccCCCCeEEEEEeCCCcCCCH
Q 012096 220 LSSVYELEAKVNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHW-LDSQPDSSVLYVSLGSLWSVSS 298 (471)
Q Consensus 220 ~~s~~~l~~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~I~vs~GS~~~~~~ 298 (471)
..+-.+++.. ...+..... |+..... .......+| ....+++++|++++||......
T Consensus 200 ~~~~~~~~~~-----~~~~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~ 257 (412)
T 3otg_A 200 DIFPPSLQEP-----EFRARPRRH---ELRPVPF--------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTV 257 (412)
T ss_dssp ECSCGGGSCH-----HHHTCTTEE---ECCCCCC--------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCH
T ss_pred eeCCHHhcCC-----cccCCCCcc---eeeccCC--------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcH
Confidence 4443333321 110111111 1111100 112223445 2333456799999999985567
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCC-CccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceeccc
Q 012096 299 VQMDEIVAGVRNSGVRFFWVSRGDT-SWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFP 377 (471)
Q Consensus 299 ~~~~~~~~al~~~~~~vi~~~~~~~-~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P 377 (471)
..+..+++++.+.+.+++|..++.. .......++|+.+.+|+|+.++|+++++ ||+|||.+|+.||+++|+|+|++|
T Consensus 258 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p 335 (412)
T 3otg_A 258 EVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFP 335 (412)
T ss_dssp HHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecC
Confidence 7888899999999999999988654 2222345689999999999999999998 999999999999999999999999
Q ss_pred ccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHH
Q 012096 378 IMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITN 457 (471)
Q Consensus 378 ~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 457 (471)
...||..|+..+++. |+|+.++. ..+++++|.++|.++++| +.+++++.+.++++.+ ..+..+.
T Consensus 336 ~~~~q~~~~~~v~~~-g~g~~~~~------~~~~~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~ 399 (412)
T 3otg_A 336 WAGDSFANAQAVAQA-GAGDHLLP------DNISPDSVSGAAKRLLAE-----ESYRAGARAVAAEIAA----MPGPDEV 399 (412)
T ss_dssp CSTTHHHHHHHHHHH-TSEEECCG------GGCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHH----SCCHHHH
T ss_pred CchhHHHHHHHHHHc-CCEEecCc------ccCCHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHhc----CCCHHHH
Confidence 999999999999977 99999987 347999999999999998 8999999999988876 4455555
Q ss_pred HHHHHHH
Q 012096 458 FDAFLND 464 (471)
Q Consensus 458 ~~~~~~~ 464 (471)
++.+.+.
T Consensus 400 ~~~~~~l 406 (412)
T 3otg_A 400 VRLLPGF 406 (412)
T ss_dssp HTTHHHH
T ss_pred HHHHHHH
Confidence 5544443
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=2.1e-33 Score=277.76 Aligned_cols=356 Identities=13% Similarity=0.138 Sum_probs=231.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEec-CCCCCC------------c
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETI-PNVIPS------------E 79 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~------------~ 79 (471)
|||+|++.++.||++|++.|+++|++ +||+|++++++...+.+... ++.+..+ +..... .
T Consensus 2 MrIl~~~~~~~gh~~~~~~la~~L~~--~GheV~v~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 2 MRVLVVPLPYPTHLMAMVPLCWALQA--SGHEVLIAAPPELQATAHGA-----GLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CEEEEECCSCHHHHHTTHHHHHHHHH--TTCEEEEEECHHHHHHHHHB-----TCEEEEC--------------CCSCCG
T ss_pred cEEEEEcCCCcchhhhHHHHHHHHHH--CCCEEEEecChhhHHHHHhC-----CCceeeecCCccchhhhhhhccccccc
Confidence 79999999999999999999999999 99999999998887777766 7777777 321100 0
Q ss_pred hhh---hhcHHHHHHHHHHhc----hHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHHHH
Q 012096 80 LVR---ARDFLAFVESVSTKM----EAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFSVF 152 (471)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 152 (471)
... .......+......+ ...+.++.+.++. .+||+||+|....++..+|+.+|||++.+.........
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~-- 150 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG-- 150 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT--
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc--
Confidence 000 011111111111111 1113444444433 26999999987777888999999999997533211000
Q ss_pred HhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhh--ccccccEEEEcchHHhhHHH
Q 012096 153 HHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVS--KVSKAQCLLLSSVYELEAKV 230 (471)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~l~~~~ 230 (471)
.... ............+. .....+..+....++++..
T Consensus 151 ---------------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 189 (391)
T 3tsa_A 151 ---------------------------------------PFSD-RAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS- 189 (391)
T ss_dssp ---------------------------------------HHHH-HHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT-
T ss_pred ---------------------------------------cccc-hHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC-
Confidence 0000 00000111111110 0111133343333333311
Q ss_pred HHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcC---CCHHHHHHHHHH
Q 012096 231 NDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWS---VSSVQMDEIVAG 307 (471)
Q Consensus 231 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~---~~~~~~~~~~~a 307 (471)
.......+.++ |. .......+|+...+++++|++++||... .....+..++++
T Consensus 190 ----~~~~~~~~~~~-p~-------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 190 ----DAPQGAPVQYV-PY-------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp ----TSCCCEECCCC-CC-------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred ----CCCccCCeeee-cC-------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 00000011222 11 1122344577665667899999999954 236678888888
Q ss_pred HHhC-CCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchh
Q 012096 308 VRNS-GVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNS 386 (471)
Q Consensus 308 l~~~-~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na 386 (471)
++. +++++|..++.........++|+++.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+.|+
T Consensus 246 -~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a 322 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322 (391)
T ss_dssp -HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHH
T ss_pred -ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHH
Confidence 888 7899998776432122245689999999999999988888 999999999999999999999999999999999
Q ss_pred hhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHH
Q 012096 387 KLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAF 461 (471)
Q Consensus 387 ~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 461 (471)
.++++. |+|+.++. +. ...+++.|.++|.++++| ++|++++.++++.+.+ ++++.+.++.+
T Consensus 323 ~~~~~~-g~g~~~~~-~~---~~~~~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i 383 (391)
T 3tsa_A 323 RNLAAA-GAGICLPD-EQ---AQSDHEQFTDSIATVLGD-----TGFAAAAIKLSDEITA----MPHPAALVRTL 383 (391)
T ss_dssp HHHHHT-TSEEECCS-HH---HHTCHHHHHHHHHHHHTC-----THHHHHHHHHHHHHHT----SCCHHHHHHHH
T ss_pred HHHHHc-CCEEecCc-cc---ccCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHc----CCCHHHHHHHH
Confidence 999977 99998874 00 125899999999999998 8999999999998874 45555554444
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=6.9e-30 Score=249.45 Aligned_cols=303 Identities=12% Similarity=0.082 Sum_probs=196.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch--hhhcCCCCCCCCeEEEecCCC-CCCc--hhhhhcHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL--SFIGSGHGNHNNIRFETIPNV-IPSE--LVRARDFL 87 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~ip~~-~~~~--~~~~~~~~ 87 (471)
.||+|..+++.||++|.++||++|++ +||+|+|+++.... +.+++. ++.+..+|.. ++.. ......+.
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~--~g~~V~~vg~~~g~e~~~v~~~-----g~~~~~i~~~~~~~~~~~~~~~~~~ 75 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA--RGYAVHWLGTPRGIENDLVPKA-----GLPLHLIQVSGLRGKGLKSLVKAPL 75 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECSSSTHHHHTGGG-----TCCEEECC--------------CHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh--CCCEEEEEECCchHhhchhhhc-----CCcEEEEECCCcCCCCHHHHHHHHH
Confidence 38999999988999999999999999 99999999976543 345555 7788888732 2210 01111222
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCC
Q 012096 88 AFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFP 165 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 165 (471)
.++..+. ....++++. +||+||++..+ ..+..+|+.+|||+++.
T Consensus 76 ~~~~~~~-----~~~~~l~~~-----~PDvVi~~g~~~s~p~~laA~~~~iP~vih------------------------ 121 (365)
T 3s2u_A 76 ELLKSLF-----QALRVIRQL-----RPVCVLGLGGYVTGPGGLAARLNGVPLVIH------------------------ 121 (365)
T ss_dssp HHHHHHH-----HHHHHHHHH-----CCSEEEECSSSTHHHHHHHHHHTTCCEEEE------------------------
T ss_pred HHHHHHH-----HHHHHHHhc-----CCCEEEEcCCcchHHHHHHHHHcCCCEEEE------------------------
Confidence 2222221 123455554 69999999766 44567899999999973
Q ss_pred CCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCCCCcccc
Q 012096 166 VELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFPFPVYPI 245 (471)
Q Consensus 166 ~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~v 245 (471)
+.+.+||+.. +.. .+..+.+ +.++++..+ ...+..++
T Consensus 122 ---------e~n~~~G~~n-------------------r~l-----~~~a~~v-~~~~~~~~~---------~~~k~~~~ 158 (365)
T 3s2u_A 122 ---------EQNAVAGTAN-------------------RSL-----APIARRV-CEAFPDTFP---------ASDKRLTT 158 (365)
T ss_dssp ---------ECSSSCCHHH-------------------HHH-----GGGCSEE-EESSTTSSC---------C---CEEC
T ss_pred ---------ecchhhhhHH-------------------Hhh-----cccccee-eeccccccc---------CcCcEEEE
Confidence 2233344210 000 0112222 233322110 22456778
Q ss_pred ccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC----CCcEEEEEcC
Q 012096 246 GPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS----GVRFFWVSRG 321 (471)
Q Consensus 246 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~----~~~vi~~~~~ 321 (471)
|......... .......+ .+++++|+|..||...... ...+.++++.+ +..++|..+.
T Consensus 159 g~pvr~~~~~--------------~~~~~~~~--~~~~~~ilv~gGs~g~~~~--~~~~~~al~~l~~~~~~~vi~~~G~ 220 (365)
T 3s2u_A 159 GNPVRGELFL--------------DAHARAPL--TGRRVNLLVLGGSLGAEPL--NKLLPEALAQVPLEIRPAIRHQAGR 220 (365)
T ss_dssp CCCCCGGGCC--------------CTTSSCCC--TTSCCEEEECCTTTTCSHH--HHHHHHHHHTSCTTTCCEEEEECCT
T ss_pred CCCCchhhcc--------------chhhhccc--CCCCcEEEEECCcCCcccc--chhhHHHHHhcccccceEEEEecCc
Confidence 8776554321 11111112 2345589999999886432 33456666654 3567777765
Q ss_pred CC-Ccc---ccccCCCceEeeccchH-HhhhhcccceeeccCCcchHHHHHHcCCceeccccc----ccccchhhhhhhh
Q 012096 322 DT-SWF---KDGCVDRGIVVPWCDQL-EVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIM----MDQVPNSKLIVED 392 (471)
Q Consensus 322 ~~-~~~---~~~~~~nv~v~~~~pq~-~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~ 392 (471)
.. +.. ....+.++.+.+|++++ ++|+.+++ +|||+|.+|++|++++|+|+|++|+. .+|..||+.+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~ 298 (365)
T 3s2u_A 221 QHAEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS 298 (365)
T ss_dssp TTHHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT
T ss_pred cccccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC
Confidence 43 111 12345689999999975 59999999 99999999999999999999999974 5899999999977
Q ss_pred hcceeeeecCCCCCCCccCHHHHHHHHHHHhcCC
Q 012096 393 WKIGWKVKKPEIGSESLVTRDEITELVKRFMDLN 426 (471)
Q Consensus 393 lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~ 426 (471)
|+|+.++. ..++++.|.++|.++++|+
T Consensus 299 -G~a~~l~~------~~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 299 -GAGRLLPQ------KSTGAAELAAQLSEVLMHP 325 (365)
T ss_dssp -TSEEECCT------TTCCHHHHHHHHHHHHHCT
T ss_pred -CCEEEeec------CCCCHHHHHHHHHHHHCCH
Confidence 99999987 4479999999999999983
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=207.55 Aligned_cols=164 Identities=21% Similarity=0.360 Sum_probs=139.5
Q ss_pred CCCchhccccccCCCCeEEEEEeCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhh
Q 012096 268 NEPDNYFHWLDSQPDSSVLYVSLGSLWS-VSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVL 346 (471)
Q Consensus 268 ~~~~~~~~~l~~~~~~~~I~vs~GS~~~-~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL 346 (471)
++++++.+|++..+++++|||++||... ...+.+..+++++++.+++++|+.++... ...++|+.+.+|+||.++|
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~---~~~~~~v~~~~~~~~~~~l 82 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKP---DTLGLNTRLYKWIPQNDLL 82 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCC---TTCCTTEEEESSCCHHHHH
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCc---ccCCCcEEEecCCCHHHHh
Confidence 5788899999877667799999999974 45677888999999999999999876431 2346799999999999999
Q ss_pred hhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCC
Q 012096 347 CHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLN 426 (471)
Q Consensus 347 ~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~ 426 (471)
.|+.+.+||||||++|++||+++|+|+|++|...||..||+++++. |+|+.++. ..++.++|.++|.++++|
T Consensus 83 ~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~------~~~~~~~l~~~i~~ll~~- 154 (170)
T 2o6l_A 83 GHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF------NTMSSTDLLNALKRVIND- 154 (170)
T ss_dssp TSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT------TTCCHHHHHHHHHHHHHC-
T ss_pred cCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc------ccCCHHHHHHHHHHHHcC-
Confidence 6666666999999999999999999999999999999999999976 99999987 447999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 012096 427 NDERKAMSKRAREVQEICQE 446 (471)
Q Consensus 427 ~~~~~~~~~~a~~l~~~~~~ 446 (471)
++|+++++++++.+++
T Consensus 155 ----~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 155 ----PSYKENVMKLSRIQHD 170 (170)
T ss_dssp ----HHHHHHHHHHC-----
T ss_pred ----HHHHHHHHHHHHHhhC
Confidence 8999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.85 E-value=2e-19 Score=175.40 Aligned_cols=335 Identities=11% Similarity=0.036 Sum_probs=200.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch--hhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL--SFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFV 90 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 90 (471)
|||++++.+..||..+++.|+++|++ +||+|++++..... ..+... ++.+..++............+....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~--~G~~V~v~~~~~~~~~~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMA--QGWQVRWLGTADRMEADLVPKH-----GIEIDFIRISGLRGKGIKALIAAPL 79 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHT--TTCEEEEEECTTSTHHHHGGGG-----TCEEEECCCCCCTTCCHHHHHTCHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHH--cCCEEEEEecCCcchhhhcccc-----CCceEEecCCccCcCccHHHHHHHH
Confidence 79999998877999999999999999 99999999986532 233333 6777777632111100000000001
Q ss_pred HHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCCCCc
Q 012096 91 ESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFPVEL 168 (471)
Q Consensus 91 ~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (471)
... . ....+..++++. +||+|+++... ..+..+++.+++|+|......
T Consensus 80 ~~~-~-~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~----------------------- 129 (364)
T 1f0k_A 80 RIF-N-AWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG----------------------- 129 (364)
T ss_dssp HHH-H-HHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-----------------------
T ss_pred HHH-H-HHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-----------------------
Confidence 110 0 111233344443 69999998643 345667888999998642110
Q ss_pred ccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCCCCccccccC
Q 012096 169 SERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFPFPVYPIGPT 248 (471)
Q Consensus 169 ~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGp~ 248 (471)
.++. .+. ...+..+.++..+... + +++..+|..
T Consensus 130 ----------~~~~-------------------~~~-----~~~~~~d~v~~~~~~~------------~-~~~~~i~n~ 162 (364)
T 1f0k_A 130 ----------IAGL-------------------TNK-----WLAKIATKVMQAFPGA------------F-PNAEVVGNP 162 (364)
T ss_dssp ----------SCCH-------------------HHH-----HHTTTCSEEEESSTTS------------S-SSCEECCCC
T ss_pred ----------CCcH-------------------HHH-----HHHHhCCEEEecChhh------------c-CCceEeCCc
Confidence 0000 000 0112334444433211 2 244555544
Q ss_pred CCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEcCCC-Cc
Q 012096 249 IPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS--GVRFFWVSRGDT-SW 325 (471)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~--~~~vi~~~~~~~-~~ 325 (471)
....... + .. ..+.+...+++++|++..|+... ......++++++.+ +.++++.+|... +.
T Consensus 163 v~~~~~~------------~-~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~ 226 (364)
T 1f0k_A 163 VRTDVLA------------L-PL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQS 226 (364)
T ss_dssp CCHHHHT------------S-CC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHH
T ss_pred cchhhcc------------c-ch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHH
Confidence 3322110 0 11 11122222345578888888764 34445566776655 466677676554 11
Q ss_pred ccc---ccC-CCceEeeccc-hHHhhhhcccceeeccCCcchHHHHHHcCCceeccccc---ccccchhhhhhhhhccee
Q 012096 326 FKD---GCV-DRGIVVPWCD-QLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIM---MDQVPNSKLIVEDWKIGW 397 (471)
Q Consensus 326 ~~~---~~~-~nv~v~~~~p-q~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~lG~G~ 397 (471)
+.. ..+ +|+.+.+|++ ...+|..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|.
T Consensus 227 l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~ 303 (364)
T 1f0k_A 227 VEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAK 303 (364)
T ss_dssp HHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEE
T ss_pred HHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEE
Confidence 111 122 5899999995 4669999999 99999989999999999999999987 7999999999977 9999
Q ss_pred eeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHh
Q 012096 398 KVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISL 467 (471)
Q Consensus 398 ~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~ 467 (471)
.++. ..++.++|.++|.++ | +..+++..+-+.++. ...+..+.++++.+.+.+
T Consensus 304 ~~~~------~d~~~~~la~~i~~l--~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 304 IIEQ------PQLSVDAVANTLAGW--S-----RETLLTMAERARAAS----IPDATERVANEVSRVARA 356 (364)
T ss_dssp ECCG------GGCCHHHHHHHHHTC--C-----HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTT
T ss_pred Eecc------ccCCHHHHHHHHHhc--C-----HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHH
Confidence 8886 335799999999888 5 565554443333322 234444445555444443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.65 E-value=6e-15 Score=136.77 Aligned_cols=113 Identities=6% Similarity=-0.009 Sum_probs=87.3
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCcc---ccc--cCCCceEeeccchH-Hhhhhcccceee
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWF---KDG--CVDRGIVVPWCDQL-EVLCHSSIGGFW 355 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~---~~~--~~~nv~v~~~~pq~-~lL~~~~~~~~I 355 (471)
+.+.|+|++|.... .+....+++++.... ++.++.+...... ... ...|+.+..|++++ ++|..+++ +|
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI 230 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LI 230 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EE
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EE
Confidence 34589999997643 335556778876654 5666666543211 111 12489999999876 59999999 99
Q ss_pred ccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeec
Q 012096 356 THCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKK 401 (471)
Q Consensus 356 thgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~ 401 (471)
|+|| +|++|+++.|+|+|++|...+|..||+.+++. |+++.+..
T Consensus 231 ~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 231 ISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp EESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred ECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 89999999999999999999999999999977 99998875
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.59 E-value=1.9e-15 Score=134.44 Aligned_cols=127 Identities=16% Similarity=0.177 Sum_probs=93.4
Q ss_pred CCCeEEEEEeCCCcCCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCC-ccc---cc---------cC----------
Q 012096 281 PDSSVLYVSLGSLWSVSSVQMDEI-----VAGVRNSG-VRFFWVSRGDTS-WFK---DG---------CV---------- 331 (471)
Q Consensus 281 ~~~~~I~vs~GS~~~~~~~~~~~~-----~~al~~~~-~~vi~~~~~~~~-~~~---~~---------~~---------- 331 (471)
+++++|||+.||.... .+.+..+ ++++.+.+ .+++|.+|.... ... .. .|
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 3566999999998432 3333333 48888887 799999987542 111 01 01
Q ss_pred -------C--CceEeeccchH-Hhhh-hcccceeeccCCcchHHHHHHcCCceeccccc----ccccchhhhhhhhhcce
Q 012096 332 -------D--RGIVVPWCDQL-EVLC-HSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIM----MDQVPNSKLIVEDWKIG 396 (471)
Q Consensus 332 -------~--nv~v~~~~pq~-~lL~-~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~lG~G 396 (471)
. ++.+.+|++++ ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++. |+|
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCE
Confidence 1 34566888875 6899 9999 99999999999999999999999984 3699999999977 998
Q ss_pred eeeecCCCCCCCccCHHHHHHHHHHH
Q 012096 397 WKVKKPEIGSESLVTRDEITELVKRF 422 (471)
Q Consensus 397 ~~l~~~~~~~~~~~~~~~l~~~i~~~ 422 (471)
+.+ ++++|.++|.++
T Consensus 182 ~~~-----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC-----------APTETGLIAGLR 196 (224)
T ss_dssp CEE-----------CSCTTTHHHHHH
T ss_pred EEc-----------CHHHHHHHHHHH
Confidence 655 334566666666
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.40 E-value=4.2e-10 Score=112.06 Aligned_cols=356 Identities=12% Similarity=0.059 Sum_probs=177.8
Q ss_pred cccCCCCcEEEEEcC---C--------CccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCC
Q 012096 6 MKATGRMCHIVALPY---P--------GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPN 74 (471)
Q Consensus 6 ~~~~~~~~~il~~~~---~--------~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~ 74 (471)
.++..+||||++++. | ..|+-..+..|+++|.+ +||+|++++.......... ....+++++..++.
T Consensus 14 ~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~--~G~~V~v~~~~~~~~~~~~-~~~~~~v~v~~~~~ 90 (438)
T 3c48_A 14 LVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAK--QGIEVDIYTRATRPSQGEI-VRVAENLRVINIAA 90 (438)
T ss_dssp -----CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHH--TTCEEEEEEECCCGGGCSE-EEEETTEEEEEECC
T ss_pred cccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHh--cCCEEEEEecCCCCCCccc-ccccCCeEEEEecC
Confidence 345678999999995 2 35788899999999999 9999999997643211100 00012777777763
Q ss_pred CCCCchhhhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHHHHHHH
Q 012096 75 VIPSELVRARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSASLFSVF 152 (471)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 152 (471)
....... ...+...+..+.. ..++..++... +||+|++.... ..+..+++.+++|+|..........
T Consensus 91 ~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~----~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~--- 159 (438)
T 3c48_A 91 GPYEGLS-KEELPTQLAAFTG---GMLSFTRREKV----TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK--- 159 (438)
T ss_dssp SCSSSCC-GGGGGGGHHHHHH---HHHHHHHHHTC----CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH---
T ss_pred CCccccc-hhHHHHHHHHHHH---HHHHHHHhccC----CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc---
Confidence 3211100 0111111111111 11111133221 49999987543 3344567788999988654432110
Q ss_pred HhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHH
Q 012096 153 HHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVND 232 (471)
Q Consensus 153 ~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 232 (471)
. ..+. ... .. . ...... .........+.++..+-...+.- ..
T Consensus 160 --------------------~------~~~~-----~~~-~~---~-~~~~~~-~~~~~~~~~d~ii~~s~~~~~~~-~~ 201 (438)
T 3c48_A 160 --------------------N------SYRD-----DSD-TP---E-SEARRI-CEQQLVDNADVLAVNTQEEMQDL-MH 201 (438)
T ss_dssp --------------------S------CC---------C-CH---H-HHHHHH-HHHHHHHHCSEEEESSHHHHHHH-HH
T ss_pred --------------------c------cccc-----ccC-Cc---c-hHHHHH-HHHHHHhcCCEEEEcCHHHHHHH-HH
Confidence 0 0000 000 00 0 000000 01123456788888775543321 11
Q ss_pred HHHhcCC-CCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC
Q 012096 233 TLKAKFP-FPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS 311 (471)
Q Consensus 233 ~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~ 311 (471)
.. . .+ .++..|............. ......+.+.+.-.+++ .+++..|+.... ..+..+++++..+
T Consensus 202 ~~-g-~~~~k~~vi~ngvd~~~~~~~~--------~~~~~~~r~~~~~~~~~-~~i~~~G~~~~~--Kg~~~li~a~~~l 268 (438)
T 3c48_A 202 HY-D-ADPDRISVVSPGADVELYSPGN--------DRATERSRRELGIPLHT-KVVAFVGRLQPF--KGPQVLIKAVAAL 268 (438)
T ss_dssp HH-C-CCGGGEEECCCCCCTTTSCCC------------CHHHHHHTTCCSSS-EEEEEESCBSGG--GCHHHHHHHHHHH
T ss_pred Hh-C-CChhheEEecCCccccccCCcc--------cchhhhhHHhcCCCCCC-cEEEEEeeeccc--CCHHHHHHHHHHH
Confidence 00 1 11 2344444433321110000 00000122222222222 566677877532 2233344444332
Q ss_pred -------CCcEEEEEcC----CC--Ccccc-----ccCCCceEeeccch---HHhhhhcccceeecc----CCcchHHHH
Q 012096 312 -------GVRFFWVSRG----DT--SWFKD-----GCVDRGIVVPWCDQ---LEVLCHSSIGGFWTH----CGLNSTLEA 366 (471)
Q Consensus 312 -------~~~vi~~~~~----~~--~~~~~-----~~~~nv~v~~~~pq---~~lL~~~~~~~~Ith----gG~~s~~ea 366 (471)
+.++++ +|. .. +.+.. ...+++.+.+|+|+ ..++..+++ +|.- |...++.||
T Consensus 269 ~~~~p~~~~~l~i-~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Ea 345 (438)
T 3c48_A 269 FDRDPDRNLRVII-CGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEA 345 (438)
T ss_dssp HHHCTTCSEEEEE-ECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHH
T ss_pred HhhCCCcceEEEE-EeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHH
Confidence 234443 443 11 11111 13468999999976 347888998 6654 234689999
Q ss_pred HHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Q 012096 367 AYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEI 443 (471)
Q Consensus 367 l~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~ 443 (471)
+++|+|+|+.+. ......+++. +.|+.++. -+.+++.++|.++++|+ .....+.+++++....
T Consensus 346 ma~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~--------~d~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 346 QASGTPVIAARV----GGLPIAVAEG-ETGLLVDG--------HSPHAWADALATLLDDD-ETRIRMGEDAVEHART 408 (438)
T ss_dssp HHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--------CCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEecCC----CChhHHhhCC-CcEEECCC--------CCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHh
Confidence 999999998753 3455556544 57888775 38999999999999872 1123444555554444
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.38 E-value=2.9e-10 Score=111.30 Aligned_cols=344 Identities=11% Similarity=0.050 Sum_probs=180.8
Q ss_pred CCcEEEEEcC--C--CccChHHHHHHHHHHHhcCCCcEEEEEECccchh---hhcCCCCCCCCeEEEecCCCCCCchhhh
Q 012096 11 RMCHIVALPY--P--GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLS---FIGSGHGNHNNIRFETIPNVIPSELVRA 83 (471)
Q Consensus 11 ~~~~il~~~~--~--~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~ip~~~~~~~~~~ 83 (471)
+||||++++. + ..|.-..+..+++.| + ||+|++++...... .... ..++.+..++......
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L-~---g~~v~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---- 70 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ-D---PESIVVFASTQNAEEAHAYDK----TLDYEVIRWPRSVMLP---- 70 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS-C---GGGEEEEEECSSHHHHHHHHT----TCSSEEEEESSSSCCS----
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh-c---CCeEEEEECCCCccchhhhcc----ccceEEEEcccccccc----
Confidence 4688999875 2 346777788888888 3 99999999875543 1211 1167777777432111
Q ss_pred hcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhc
Q 012096 84 RDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQN 161 (471)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 161 (471)
.. .....+..++++. +||+|++.... .....+++.+++|.++++.......
T Consensus 71 -~~---------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~------------ 123 (394)
T 3okp_A 71 -TP---------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG------------ 123 (394)
T ss_dssp -CH---------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH------------
T ss_pred -ch---------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh------------
Confidence 11 0111234445443 69999986544 3455668889999555433221100
Q ss_pred CCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCCCC
Q 012096 162 GHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFPFP 241 (471)
Q Consensus 162 ~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~ 241 (471)
+ . .......... ......+.++..|-...+.- .... . ...+
T Consensus 124 ----------------~----~--------------~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~-~~~~-~-~~~~ 164 (394)
T 3okp_A 124 ----------------W----S--------------MLPGSRQSLR--KIGTEVDVLTYISQYTLRRF-KSAF-G-SHPT 164 (394)
T ss_dssp ----------------H----T--------------TSHHHHHHHH--HHHHHCSEEEESCHHHHHHH-HHHH-C-SSSE
T ss_pred ----------------h----h--------------hcchhhHHHH--HHHHhCCEEEEcCHHHHHHH-HHhc-C-CCCC
Confidence 0 0 0001111111 12356677787775443321 1110 0 1234
Q ss_pred ccccccCCCCccccc-ccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcE
Q 012096 242 VYPIGPTIPYFEIKS-NLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRF 315 (471)
Q Consensus 242 ~~~vGp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~v 315 (471)
+..+........... .. .....+.+.+.-. ++..+++..|+... ...+..+++++..+ +.++
T Consensus 165 ~~vi~ngv~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 165 FEHLPSGVDVKRFTPATP---------EDKSATRKKLGFT-DTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp EEECCCCBCTTTSCCCCH---------HHHHHHHHHTTCC-TTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEE
T ss_pred eEEecCCcCHHHcCCCCc---------hhhHHHHHhcCCC-cCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEE
Confidence 444544333221100 00 0011222222222 22256667777653 22233344444332 4566
Q ss_pred EEEEcCCC-Ccc---ccccCCCceEeeccchHH---hhhhcccceeec-----------cCCcchHHHHHHcCCceeccc
Q 012096 316 FWVSRGDT-SWF---KDGCVDRGIVVPWCDQLE---VLCHSSIGGFWT-----------HCGLNSTLEAAYAGVPMLTFP 377 (471)
Q Consensus 316 i~~~~~~~-~~~---~~~~~~nv~v~~~~pq~~---lL~~~~~~~~It-----------hgG~~s~~eal~~GvP~v~~P 377 (471)
++.-.+.. +.+ .....+++.+.+|+|+.+ ++..+++ +|. -|.-.++.||+++|+|+|+.+
T Consensus 233 ~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~ 310 (394)
T 3okp_A 233 LIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310 (394)
T ss_dssp EEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECS
T ss_pred EEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeC
Confidence 55432221 111 122346899999997544 7888888 665 444578999999999999966
Q ss_pred ccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHH
Q 012096 378 IMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITN 457 (471)
Q Consensus 378 ~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~ 457 (471)
. ......+. . |.|+.++. -+.+++.++|.++++|+ .....+.+++++. +++ .-+-...
T Consensus 311 ~----~~~~e~i~-~-~~g~~~~~--------~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~---~~~----~~s~~~~ 368 (394)
T 3okp_A 311 S----GGAPETVT-P-ATGLVVEG--------SDVDKLSELLIELLDDP-IRRAAMGAAGRAH---VEA----EWSWEIM 368 (394)
T ss_dssp S----TTGGGGCC-T-TTEEECCT--------TCHHHHHHHHHHHHTCH-HHHHHHHHHHHHH---HHH----HTBHHHH
T ss_pred C----CChHHHHh-c-CCceEeCC--------CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH---HHH----hCCHHHH
Confidence 4 33444444 5 57777765 38999999999999872 1112233333322 221 2355556
Q ss_pred HHHHHHHHHhh
Q 012096 458 FDAFLNDISLA 468 (471)
Q Consensus 458 ~~~~~~~~~~~ 468 (471)
.+++.+.+.+.
T Consensus 369 ~~~~~~~~~~~ 379 (394)
T 3okp_A 369 GERLTNILQSE 379 (394)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHHh
Confidence 66666655543
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.37 E-value=1e-10 Score=116.28 Aligned_cols=385 Identities=10% Similarity=-0.011 Sum_probs=187.0
Q ss_pred CCcEEEEEcCC-----CccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcC------C---------CCCCCCeEEE
Q 012096 11 RMCHIVALPYP-----GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGS------G---------HGNHNNIRFE 70 (471)
Q Consensus 11 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~------~---------~~~~~~~~~~ 70 (471)
++|||++++.. ..|--.-+..|+++|++ +||+|+++++......-.. . ....+++.+.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~--~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~ 78 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALAS--LGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIY 78 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHH--TTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHH--CCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEE
Confidence 46899998843 34555668999999999 9999999996532211000 0 0011267777
Q ss_pred ecCCCCCCchhhhhcHHHH-HHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHH
Q 012096 71 TIPNVIPSELVRARDFLAF-VESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSAS 147 (471)
Q Consensus 71 ~ip~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~ 147 (471)
.++................ ...+. .....+..+++.+.....+||+|.+.... ..+..+++..++|+|........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 79 RIGGGLLDSEDVYGPGWDGLIRKAV-TFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp EEESGGGGCSSTTCSHHHHHHHHHH-HHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred EecchhccccccccCCcchhhhhhH-HHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc
Confidence 6664111000000101111 11111 11122333444441101479999987654 33456677889999886443211
Q ss_pred HHHHHHhhHHHHhcCCCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhh
Q 012096 148 LFSVFHHFELLVQNGHFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELE 227 (471)
Q Consensus 148 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 227 (471)
. ..+..+. . ...+............. .....++.++..|-...+
T Consensus 158 ~------------------------~~~~~~~---~---~~~~~~~~~~~~~~~~~------~~~~~ad~ii~~S~~~~~ 201 (439)
T 3fro_A 158 S------------------------KLPAFYF---H---EAGLSELAPYPDIDPEH------TGGYIADIVTTVSRGYLI 201 (439)
T ss_dssp C------------------------CEEHHHH---H---HTTCGGGCCSSEECHHH------HHHHHCSEEEESCHHHHH
T ss_pred c------------------------cCchHHh---C---ccccccccccceeeHhh------hhhhhccEEEecCHHHHH
Confidence 0 0000000 0 00000000000001111 123456777777754433
Q ss_pred HHHHHHHHhcCCCCccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCc-C-CCHHHHHHHH
Q 012096 228 AKVNDTLKAKFPFPVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLW-S-VSSVQMDEIV 305 (471)
Q Consensus 228 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~-~-~~~~~~~~~~ 305 (471)
. ....... ...++..|..-.....-..... +.........+.+.+.-. ++ .+++..|+.. . ...+.+...+
T Consensus 202 ~-~~~~~~~-~~~~i~vi~ngvd~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~-~~i~~~G~~~~~~Kg~~~li~a~ 274 (439)
T 3fro_A 202 D-EWGFFRN-FEGKITYVFNGIDCSFWNESYL---TGSRDERKKSLLSKFGMD-EG-VTFMFIGRFDRGQKGVDVLLKAI 274 (439)
T ss_dssp H-THHHHGG-GTTSEEECCCCCCTTTSCGGGS---CSCHHHHHHHHHHHHTCC-SC-EEEEEECCSSCTTBCHHHHHHHH
T ss_pred H-Hhhhhhh-cCCceeecCCCCCchhcCcccc---cchhhhhHHHHHHHcCCC-CC-cEEEEEcccccccccHHHHHHHH
Confidence 3 1111111 2234444443332211000000 000000011222223222 33 6777788887 3 3344444444
Q ss_pred HHHHh----CCCcEEEEEcCCCCc-------cccccCCCceEeeccchHH---hhhhcccceeecc----CCcchHHHHH
Q 012096 306 AGVRN----SGVRFFWVSRGDTSW-------FKDGCVDRGIVVPWCDQLE---VLCHSSIGGFWTH----CGLNSTLEAA 367 (471)
Q Consensus 306 ~al~~----~~~~vi~~~~~~~~~-------~~~~~~~nv~v~~~~pq~~---lL~~~~~~~~Ith----gG~~s~~eal 367 (471)
..+.. .+.++++ +|..... +....++++.+.+|+|+.+ ++..+++ +|.- |--.++.||+
T Consensus 275 ~~l~~~~~~~~~~l~i-~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAm 351 (439)
T 3fro_A 275 EILSSKKEFQEMRFII-IGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAM 351 (439)
T ss_dssp HHHHTSGGGGGEEEEE-ECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHH
T ss_pred HHHHhcccCCCeEEEE-EcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHH
Confidence 44444 2445544 3433211 1112344556678898754 6888888 6632 3346899999
Q ss_pred HcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhc-CCchhHHHHHHHHHHHHHHHHH
Q 012096 368 YAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMD-LNNDERKAMSKRAREVQEICQE 446 (471)
Q Consensus 368 ~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~-~~~~~~~~~~~~a~~l~~~~~~ 446 (471)
++|+|+|+... ......++ . |.|+.++. -+.+++.++|.++++ ++ +....+.+++++..+.
T Consensus 352 a~G~Pvi~s~~----~~~~e~~~-~-~~g~~~~~--------~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~~--- 413 (439)
T 3fro_A 352 CLGAIPIASAV----GGLRDIIT-N-ETGILVKA--------GDPGELANAILKALELSR-SDLSKFRENCKKRAMS--- 413 (439)
T ss_dssp HTTCEEEEESS----THHHHHCC-T-TTCEEECT--------TCHHHHHHHHHHHHHHTT-TTTHHHHHHHHHHHHT---
T ss_pred HCCCCeEEcCC----CCcceeEE-c-CceEEeCC--------CCHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHhh---
Confidence 99999998643 34455554 5 78888875 389999999999998 52 2234455555544422
Q ss_pred hHhcCCCcHHHHHHHHHHHHh
Q 012096 447 AVAENGSSITNFDAFLNDISL 467 (471)
Q Consensus 447 ~~~~~g~~~~~~~~~~~~~~~ 467 (471)
-+-...++++.+.+.+
T Consensus 414 -----~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 414 -----FSWEKSAERYVKAYTG 429 (439)
T ss_dssp -----SCHHHHHHHHHHHHHT
T ss_pred -----CcHHHHHHHHHHHHHH
Confidence 2445555555554443
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.36 E-value=6.7e-11 Score=115.41 Aligned_cols=124 Identities=11% Similarity=0.111 Sum_probs=82.2
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC---Cccccc--cCCCceEeeccch---HHhhhhc
Q 012096 283 SSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDT---SWFKDG--CVDRGIVVPWCDQ---LEVLCHS 349 (471)
Q Consensus 283 ~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~---~~~~~~--~~~nv~v~~~~pq---~~lL~~~ 349 (471)
+++|+++.|...... .+..+++|++.+ +.++++..+.+. +.+... ..+++.+.+++++ .++|..+
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRAS 275 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTE
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhC
Confidence 347777777553321 345566666543 456555445332 111111 1247888855554 5789999
Q ss_pred ccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 350 SIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 350 ~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
++ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|+.++. ++++|.++|.++++|
T Consensus 276 d~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~~---------d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 276 LL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAGT---------DPEGVYRVVKGLLEN 334 (376)
T ss_dssp EE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECCS---------CHHHHHHHHHHHHTC
T ss_pred cE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECCC---------CHHHHHHHHHHHHhC
Confidence 99 999873 446699999999999886666655 2346 88877754 899999999999987
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.31 E-value=1.6e-11 Score=120.62 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=84.9
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC---Ccccc--ccCCCceEeeccc---hHHhhhh
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDT---SWFKD--GCVDRGIVVPWCD---QLEVLCH 348 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~---~~~~~--~~~~nv~v~~~~p---q~~lL~~ 348 (471)
++++|+++.+-..+... .+..+++|+.++ +.++|+..+.++ +.+.. ...+++.+.++++ ...++..
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ 307 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDR 307 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHh
Confidence 45577777532222222 245666776543 456766554332 11111 1135788877764 4568889
Q ss_pred cccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCch
Q 012096 349 SSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNND 428 (471)
Q Consensus 349 ~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 428 (471)
+++ +|+-.| |.+.||.++|+|+|+..-..+++ . +.+. |.++.+.. ++++|.++|.++++|
T Consensus 308 ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e-~v~~-G~~~lv~~---------d~~~l~~ai~~ll~d--- 367 (396)
T 3dzc_A 308 AHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---E-AVAA-GTVKLVGT---------NQQQICDALSLLLTD--- 367 (396)
T ss_dssp CSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---H-HHHH-TSEEECTT---------CHHHHHHHHHHHHHC---
T ss_pred cCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---H-HHHc-CceEEcCC---------CHHHHHHHHHHHHcC---
Confidence 998 999987 66679999999999975444443 2 3346 87755543 789999999999987
Q ss_pred hHHHHHHHH
Q 012096 429 ERKAMSKRA 437 (471)
Q Consensus 429 ~~~~~~~~a 437 (471)
+..+++.
T Consensus 368 --~~~~~~m 374 (396)
T 3dzc_A 368 --PQAYQAM 374 (396)
T ss_dssp --HHHHHHH
T ss_pred --HHHHHHH
Confidence 5554433
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.29 E-value=5.9e-12 Score=123.92 Aligned_cols=159 Identities=13% Similarity=0.117 Sum_probs=99.0
Q ss_pred CCCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC---Ccccc--ccCCCceEeeccc---hHHhhh
Q 012096 281 PDSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDT---SWFKD--GCVDRGIVVPWCD---QLEVLC 347 (471)
Q Consensus 281 ~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~---~~~~~--~~~~nv~v~~~~p---q~~lL~ 347 (471)
+++++++++.|...... ..+..+++++.++ +.++|+..+.++ +.+.. ...+++.+.++++ ...++.
T Consensus 222 ~~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~ 300 (403)
T 3ot5_A 222 GDNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLR 300 (403)
T ss_dssp TTCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred cCCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHH
Confidence 34557877765432211 1245555655432 456776654332 11111 1225899998886 445888
Q ss_pred hcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCc
Q 012096 348 HSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNN 427 (471)
Q Consensus 348 ~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 427 (471)
.+++ +|+..|. .+.||.++|+|+|++|-..+++. +.+. |.|+.+.. ++++|.++|.++++|
T Consensus 301 ~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~---------d~~~l~~ai~~ll~~-- 361 (403)
T 3ot5_A 301 KSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT---------NKENLIKEALDLLDN-- 361 (403)
T ss_dssp HEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS---------CHHHHHHHHHHHHHC--
T ss_pred hcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC---------CHHHHHHHHHHHHcC--
Confidence 9998 9988752 33699999999999976666554 2346 88777665 899999999999987
Q ss_pred hhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHH
Q 012096 428 DERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDIS 466 (471)
Q Consensus 428 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~ 466 (471)
+..+++..+-+.. ...|+++.+.++.+.+.+.
T Consensus 362 ---~~~~~~m~~~~~~----~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 362 ---KESHDKMAQAANP----YGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp ---HHHHHHHHHSCCT----TCCSCHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHhhcCc----ccCCcHHHHHHHHHHHHhC
Confidence 5555433322222 2456677777666666553
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.25 E-value=3.4e-09 Score=104.19 Aligned_cols=307 Identities=10% Similarity=0.015 Sum_probs=160.2
Q ss_pred CCCCcEEEEEcCC---C-ccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhh
Q 012096 9 TGRMCHIVALPYP---G-RGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRAR 84 (471)
Q Consensus 9 ~~~~~~il~~~~~---~-~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~ 84 (471)
..+||||++++.. . .|.-.-...++++|.+ +||+|++++............. ..+ .+..+|...
T Consensus 17 ~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~--~G~~V~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~-------- 84 (406)
T 2gek_A 17 RGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRD--AGHEVSVLAPASPHVKLPDYVV-SGG-KAVPIPYNG-------- 84 (406)
T ss_dssp ----CEEEEECSSCTTSCCHHHHHHHHHHHHHHH--TTCEEEEEESCCTTSCCCTTEE-ECC-CCC--------------
T ss_pred CCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHH--CCCeEEEEecCCccccCCcccc-cCC-cEEeccccC--------
Confidence 3557899999853 2 4666889999999999 9999999998654331111100 001 111111000
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcC
Q 012096 85 DFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNG 162 (471)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~ 162 (471)
....+... ......+..++++. +||+|++.... ..+..+++.+++|+|........
T Consensus 85 ~~~~~~~~--~~~~~~l~~~l~~~-----~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~--------------- 142 (406)
T 2gek_A 85 SVARLRFG--PATHRKVKKWIAEG-----DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTT--------------- 142 (406)
T ss_dssp ------CC--HHHHHHHHHHHHHH-----CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCC---------------
T ss_pred Cccccccc--HHHHHHHHHHHHhc-----CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcch---------------
Confidence 00000000 00112234444443 59999987655 33456677789999986332110
Q ss_pred CCCCCcccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHh-hccccccEEEEcchHHhhHHHHHHHHhcCCC-
Q 012096 163 HFPVELSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESV-SKVSKAQCLLLSSVYELEAKVNDTLKAKFPF- 240 (471)
Q Consensus 163 ~~p~~~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~- 240 (471)
. ........... ......+.++..+-...+.- ...++.
T Consensus 143 ------------------~-----------------~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~-----~~~~~~~ 182 (406)
T 2gek_A 143 ------------------K-----------------SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQ-----MEALGSD 182 (406)
T ss_dssp ------------------S-----------------HHHHHHHHSTTHHHHTTCSEEEESSHHHHHHH-----HHHHSSC
T ss_pred ------------------h-----------------hhhHHHHHHHHHHHHhhCCEEEECCHHHHHHH-----HHhcCCC
Confidence 0 00000011111 23456777777774433321 111222
Q ss_pred CccccccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCC-cCCCHHHHHHHHHHHHhC-----CCc
Q 012096 241 PVYPIGPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSL-WSVSSVQMDEIVAGVRNS-----GVR 314 (471)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~-~~~~~~~~~~~~~al~~~-----~~~ 314 (471)
++ .+.......... +.... .. +.. + ..+++..|+. .. ...+..+++++..+ +.+
T Consensus 183 ~~-vi~~~v~~~~~~------------~~~~~-~~-~~~--~-~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~ 242 (406)
T 2gek_A 183 AV-EIPNGVDVASFA------------DAPLL-DG-YPR--E-GRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVE 242 (406)
T ss_dssp EE-ECCCCBCHHHHH------------TCCCC-TT-CSC--S-SCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCE
T ss_pred cE-EecCCCChhhcC------------CCchh-hh-ccC--C-CeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeE
Confidence 23 443332211110 00000 00 111 1 2466667777 42 22233444444433 455
Q ss_pred EEEEEcCCCC-cccc---ccCCCceEeeccchH---Hhhhhcccceeec----cCCc-chHHHHHHcCCceecccccccc
Q 012096 315 FFWVSRGDTS-WFKD---GCVDRGIVVPWCDQL---EVLCHSSIGGFWT----HCGL-NSTLEAAYAGVPMLTFPIMMDQ 382 (471)
Q Consensus 315 vi~~~~~~~~-~~~~---~~~~nv~v~~~~pq~---~lL~~~~~~~~It----hgG~-~s~~eal~~GvP~v~~P~~~DQ 382 (471)
+++ +|.... .+.+ ...+|+.+.+++++. .++..+++ +|. +.|. .++.||+++|+|+|+.+.
T Consensus 243 l~i-~G~~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~---- 315 (406)
T 2gek_A 243 ILI-VGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL---- 315 (406)
T ss_dssp EEE-ESCSCHHHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----
T ss_pred EEE-EcCCcHHHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----
Confidence 544 443322 1111 124689999999864 68899999 653 4444 489999999999998755
Q ss_pred cchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 383 VPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 383 ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
......+.+. +.|+.++. -+.+++.++|.++++|
T Consensus 316 ~~~~e~i~~~-~~g~~~~~--------~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 316 DAFRRVLADG-DAGRLVPV--------DDADGMAAALIGILED 349 (406)
T ss_dssp HHHHHHHTTT-TSSEECCT--------TCHHHHHHHHHHHHHC
T ss_pred CcHHHHhcCC-CceEEeCC--------CCHHHHHHHHHHHHcC
Confidence 4455566644 67877765 3889999999999987
No 32
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.24 E-value=6.1e-09 Score=105.57 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=81.8
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCC-----CcEEEEEcCCCCc-----------------cc---c--ccCCCceEe
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSG-----VRFFWVSRGDTSW-----------------FK---D--GCVDRGIVV 337 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~-----~~vi~~~~~~~~~-----------------~~---~--~~~~nv~v~ 337 (471)
.+++..|.... ...+..+++|+..+. ...++.+|+.... +. . .+.++|.+.
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~ 340 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMF 340 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHhcCCCceEEEC
Confidence 45666777653 334566777776653 2245555551111 11 1 134689999
Q ss_pred eccchH---Hhhhhc----ccceeecc---CCc-chHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCC
Q 012096 338 PWCDQL---EVLCHS----SIGGFWTH---CGL-NSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGS 406 (471)
Q Consensus 338 ~~~pq~---~lL~~~----~~~~~Ith---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~ 406 (471)
+++|+. .++..+ ++ +|.- -|. .++.||+++|+|+|+... ......+.+. ..|+.++.
T Consensus 341 G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~~~----- 408 (499)
T 2r60_A 341 PLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLVDP----- 408 (499)
T ss_dssp ECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEECT-----
T ss_pred CCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEeCC-----
Confidence 999754 478888 88 6632 243 689999999999998753 3455555533 47888875
Q ss_pred CCccCHHHHHHHHHHHhcC
Q 012096 407 ESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~ 425 (471)
-+.+++.++|.++++|
T Consensus 409 ---~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 409 ---EDPEDIARGLLKAFES 424 (499)
T ss_dssp ---TCHHHHHHHHHHHHSC
T ss_pred ---CCHHHHHHHHHHHHhC
Confidence 3899999999999987
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.22 E-value=6.4e-11 Score=115.85 Aligned_cols=126 Identities=17% Similarity=0.142 Sum_probs=83.9
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC---Cccccc--cCCCceEeeccch---HHhhhh
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDT---SWFKDG--CVDRGIVVPWCDQ---LEVLCH 348 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~---~~~~~~--~~~nv~v~~~~pq---~~lL~~ 348 (471)
++++|+++.|...... ..+..+++|+.++ +.++++..+.+. +.+.+. ..+++.+.+++++ ..+|..
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ 282 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNH 282 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHh
Confidence 3557888888766432 2345555665442 356665434221 111111 1258888766653 558899
Q ss_pred cccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 349 SSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 349 ~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+++ ||+.+|. .+.||+++|+|+|+.+..++. ..+.+. |.|+.++. ++++|.++|.++++|
T Consensus 283 ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~~---------d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 283 AWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVGT---------DKQRIVEEVTRLLKD 342 (384)
T ss_dssp CSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEECS---------SHHHHHHHHHHHHHC
T ss_pred CcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeCC---------CHHHHHHHHHHHHhC
Confidence 999 9998753 488999999999999874433 234446 88887765 889999999999987
No 34
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.17 E-value=1.3e-09 Score=104.84 Aligned_cols=121 Identities=12% Similarity=0.050 Sum_probs=81.7
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCC----CccccccCCCceEeeccchH---Hhhhhcccceee--c
Q 012096 286 LYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDT----SWFKDGCVDRGIVVPWCDQL---EVLCHSSIGGFW--T 356 (471)
Q Consensus 286 I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~----~~~~~~~~~nv~v~~~~pq~---~lL~~~~~~~~I--t 356 (471)
+++..|... ....+..++++++.++.++++.-.+.. ..+....++|+.+.+|+++. .++..+++ +| +
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~ps 239 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAMS 239 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEECC
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEECC
Confidence 344467665 234466777888877887766433322 11112234789999999965 68899999 65 3
Q ss_pred c-----------CCc-chHHHHHHcCCceecccccccccchhhhhhh--hhcceeeeecCCCCCCCccCHHHHHHHHHHH
Q 012096 357 H-----------CGL-NSTLEAAYAGVPMLTFPIMMDQVPNSKLIVE--DWKIGWKVKKPEIGSESLVTRDEITELVKRF 422 (471)
Q Consensus 357 h-----------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~ 422 (471)
. -|. .++.||+++|+|+|+... ..+...+++ . +.|+.++. +.+++.++|.++
T Consensus 240 ~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~---------d~~~l~~~i~~l 305 (342)
T 2iuy_A 240 QAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF---------APDEARRTLAGL 305 (342)
T ss_dssp CCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC---------CHHHHHHHHHTS
T ss_pred cccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC---------CHHHHHHHHHHH
Confidence 2 343 589999999999999765 345555654 3 46665543 889999999988
Q ss_pred hc
Q 012096 423 MD 424 (471)
Q Consensus 423 l~ 424 (471)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 85
No 35
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.14 E-value=4.2e-09 Score=102.42 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=80.5
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCc-cc----cccC--CCceEeeccch---HHhh
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDTSW-FK----DGCV--DRGIVVPWCDQ---LEVL 346 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~~~-~~----~~~~--~nv~v~~~~pq---~~lL 346 (471)
++++|+++.|...... ..+..+++|+.++ +.++++ +..+.. +. .... +++.+.+++++ ..+|
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3457777887755321 3355666776543 345444 322211 11 1112 58998777764 4578
Q ss_pred hhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 347 CHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 347 ~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
..+++ ||+..| +.+.||+++|+|+|+....+.. .. +.+. |.|+.++. +.++|.++|.++++|
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e-~v~~-g~g~~v~~---------d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PE-GIEA-GTLKLAGT---------DEETIFSLADELLSD 342 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HH-HHHT-TSEEECCS---------CHHHHHHHHHHHHHC
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ce-eecC-CceEEcCC---------CHHHHHHHHHHHHhC
Confidence 88888 998864 4588999999999988543332 22 3346 88877765 889999999999987
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.11 E-value=6.4e-08 Score=94.75 Aligned_cols=310 Identities=11% Similarity=0.066 Sum_probs=160.2
Q ss_pred EEEEEcCCCc-cChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHHH
Q 012096 14 HIVALPYPGR-GHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVES 92 (471)
Q Consensus 14 ~il~~~~~~~-GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~ 92 (471)
++....+|.. |.-.-...|+++|++ +||+|++++....... .. ..+++.+..++......... ... .+.
T Consensus 17 ~~~~~~~p~~GG~~~~~~~la~~L~~--~G~~V~v~~~~~~~~~-~~---~~~~i~~~~~~~~~~~~~~~--~~~-~~~- 86 (394)
T 2jjm_A 17 KIGITCYPSVGGSGVVGTELGKQLAE--RGHEIHFITSGLPFRL-NK---VYPNIYFHEVTVNQYSVFQY--PPY-DLA- 86 (394)
T ss_dssp EEEEECCC--CHHHHHHHHHHHHHHH--TTCEEEEECSSCC-----C---CCTTEEEECCCCC----CCS--CCH-HHH-
T ss_pred eeehhcCCCCCCHHHHHHHHHHHHHh--CCCEEEEEeCCCCCcc-cc---cCCceEEEeccccccccccc--ccc-cHH-
Confidence 7777777754 577778899999999 9999999998543221 11 12367776665221100000 000 000
Q ss_pred HHHhchHHHHHHHHHhhhcCCCceEEEEcCchh--hHHHHHhh-c--CCCeEEEecchHHHHHHHHhhHHHHhcCCCCCC
Q 012096 93 VSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLA--WAVDVGNR-R--NIPVASFWSMSASLFSVFHHFELLVQNGHFPVE 167 (471)
Q Consensus 93 ~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~--~~~~~A~~-l--gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (471)
....+..++++. +||+|++..... ....++.. + ++|+|.........
T Consensus 87 ----~~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------------------- 138 (394)
T 2jjm_A 87 ----LASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------------------- 138 (394)
T ss_dssp ----HHHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-------------------
T ss_pred ----HHHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-------------------
Confidence 011234445443 599999875432 22334443 3 59988754332110
Q ss_pred cccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCC--CCcccc
Q 012096 168 LSERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFP--FPVYPI 245 (471)
Q Consensus 168 ~~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~--~~~~~v 245 (471)
..+.. . . .....+ ......+.++..|-...+. ....+. .++..+
T Consensus 139 -----------~~~~~-------~-~----~~~~~~------~~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi 184 (394)
T 2jjm_A 139 -----------VLGSD-------P-S----LNNLIR------FGIEQSDVVTAVSHSLINE-----THELVKPNKDIQTV 184 (394)
T ss_dssp -----------TTTTC-------T-T----THHHHH------HHHHHSSEEEESCHHHHHH-----HHHHTCCSSCEEEC
T ss_pred -----------ccCCC-------H-H----HHHHHH------HHHhhCCEEEECCHHHHHH-----HHHhhCCcccEEEe
Confidence 00000 0 0 001111 1234577778777543332 122122 355555
Q ss_pred ccCCCCcccccccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHh----CCCcEEEEEcC
Q 012096 246 GPTIPYFEIKSNLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRN----SGVRFFWVSRG 321 (471)
Q Consensus 246 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~----~~~~vi~~~~~ 321 (471)
........... ...+.+.+.+.-.++ ..+++..|.... ...+..++++++. .+.++++ +|.
T Consensus 185 ~ngv~~~~~~~-----------~~~~~~~~~~~~~~~-~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~ 249 (394)
T 2jjm_A 185 YNFIDERVYFK-----------RDMTQLKKEYGISES-EKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKLLL-VGD 249 (394)
T ss_dssp CCCCCTTTCCC-----------CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEEEE-ECC
T ss_pred cCCccHHhcCC-----------cchHHHHHHcCCCCC-CeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEEEE-ECC
Confidence 54433221100 011122222221112 245566677653 2223344444443 2455444 443
Q ss_pred CC--Cccc---cc--cCCCceEeeccch-HHhhhhcccceee----ccCCcchHHHHHHcCCceecccccccccchhhhh
Q 012096 322 DT--SWFK---DG--CVDRGIVVPWCDQ-LEVLCHSSIGGFW----THCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLI 389 (471)
Q Consensus 322 ~~--~~~~---~~--~~~nv~v~~~~pq-~~lL~~~~~~~~I----thgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v 389 (471)
.. +.+. .. +.+++.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+
T Consensus 250 g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v 323 (394)
T 2jjm_A 250 GPEFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI 323 (394)
T ss_dssp CTTHHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC
T ss_pred chHHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh
Confidence 22 1111 11 2357888887654 558999998 77 445567899999999999987642 344445
Q ss_pred hhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 390 VEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 390 ~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
++. +.|+.++. -+.+++.++|.++++|
T Consensus 324 ~~~-~~g~~~~~--------~d~~~la~~i~~l~~~ 350 (394)
T 2jjm_A 324 QHG-DTGYLCEV--------GDTTGVADQAIQLLKD 350 (394)
T ss_dssp CBT-TTEEEECT--------TCHHHHHHHHHHHHHC
T ss_pred hcC-CceEEeCC--------CCHHHHHHHHHHHHcC
Confidence 433 57887775 3889999999999987
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.10 E-value=1e-10 Score=114.10 Aligned_cols=316 Identities=11% Similarity=0.095 Sum_probs=165.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchh-hhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLS-FIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFV 90 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~ 90 (471)
|.|++++ .+++--+.-+-+|.++|.+ + +++.++.+....+ .+...-. +++... -|+-. .+.. ...+....
T Consensus 9 ~~~~~~v-~GtRpe~~k~~p~~~~l~~--~-~~~~~~~tgqh~~~~~~~~~~--~~~~i~-~~~~~-l~~~-~~~~~~~~ 79 (385)
T 4hwg_A 9 MLKVMTI-VGTRPELIKLCCVISEFDK--H-TKHILVHTGQNYAYELNQVFF--DDMGIR-KPDYF-LEVA-ADNTAKSI 79 (385)
T ss_dssp CCEEEEE-ECSHHHHHHHHHHHHHHHH--H-SEEEEEECSCHHHHHHTHHHH--C-CCCC-CCSEE-CCCC-CCCSHHHH
T ss_pred hhheeEE-EEcCHhHHHHHHHHHHHHh--c-CCEEEEEeCCCCChhHHHHHH--hhCCCC-CCcee-cCCC-CCCHHHHH
Confidence 6677665 5677778888888999998 7 8888888775543 1111000 012210 11100 0111 11222222
Q ss_pred HHHHHhchHHHHHHHHHhhhcCCCceEEEEcC--chhhHHHHHhhcCCCeEEEecchHHHHHHHHhhHHHHhcCCCCCCc
Q 012096 91 ESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT--FLAWAVDVGNRRNIPVASFWSMSASLFSVFHHFELLVQNGHFPVEL 168 (471)
Q Consensus 91 ~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~--~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (471)
... -..+++++++. +||+|++-. ...++..+|.++|||++.+...
T Consensus 80 ~~~----~~~l~~~l~~~-----kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------------ 126 (385)
T 4hwg_A 80 GLV----IEKVDEVLEKE-----KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------------ 126 (385)
T ss_dssp HHH----HHHHHHHHHHH-----CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC------------------------
T ss_pred HHH----HHHHHHHHHhc-----CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC------------------------
Confidence 222 22345566665 599998733 3444477899999997654111
Q ss_pred ccCCccccccCCCCCcCCcCCCCccccCCCchHHHHHHHHhhccccccEEEEcchHHhhHHHHHHHHhcCC-CCcccccc
Q 012096 169 SERGEEVVDYIPGLASTKLADLPTIFYGSGRQTLQRALESVSKVSKAQCLLLSSVYELEAKVNDTLKAKFP-FPVYPIGP 247 (471)
Q Consensus 169 ~~~~~~~~~~ip~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~~~~~vGp 247 (471)
+.+... ..+. ...+.... ..++..+.++-..-+. +.+...+ .+++.+|.
T Consensus 127 -------------lrs~~~-~~pe-------e~nR~~~~-----~~a~~~~~~te~~~~~----l~~~G~~~~~I~vtGn 176 (385)
T 4hwg_A 127 -------------NRCFDQ-RVPE-------EINRKIID-----HISDVNITLTEHARRY----LIAEGLPAELTFKSGS 176 (385)
T ss_dssp -------------CCCSCT-TSTH-------HHHHHHHH-----HHCSEEEESSHHHHHH----HHHTTCCGGGEEECCC
T ss_pred -------------Cccccc-cCcH-------HHHHHHHH-----hhhceeecCCHHHHHH----HHHcCCCcCcEEEECC
Confidence 000000 0010 01111111 1234445554322221 0111122 35777885
Q ss_pred CCCCccccc-ccccccccCCCCCCchhccccccCCCCeEEEEEeCCCcCCC-HHHHHHHHHHHHhC----CCcEEEEEcC
Q 012096 248 TIPYFEIKS-NLLTSTSLNINNEPDNYFHWLDSQPDSSVLYVSLGSLWSVS-SVQMDEIVAGVRNS----GVRFFWVSRG 321 (471)
Q Consensus 248 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~vs~GS~~~~~-~~~~~~~~~al~~~----~~~vi~~~~~ 321 (471)
...+..... .. ...+++.+.++-.+ ++.|+++.|...+.. ...+..+++++.++ +.++|+....
T Consensus 177 p~~D~~~~~~~~---------~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p 246 (385)
T 4hwg_A 177 HMPEVLDRFMPK---------ILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP 246 (385)
T ss_dssp SHHHHHHHHHHH---------HHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH
T ss_pred chHHHHHHhhhh---------cchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh
Confidence 443211100 00 01122333333222 458999988765443 24566777777653 5677776542
Q ss_pred CC-Ccccc-----ccCCCceEeeccc---hHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhh
Q 012096 322 DT-SWFKD-----GCVDRGIVVPWCD---QLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVED 392 (471)
Q Consensus 322 ~~-~~~~~-----~~~~nv~v~~~~p---q~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~ 392 (471)
.. +.+.. ...+|+++.+.++ ...++.++++ +|+-.|. .+.||.++|+|+|+++-..+.+. .+ +.
T Consensus 247 ~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~ 319 (385)
T 4hwg_A 247 RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA 319 (385)
T ss_dssp HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc
Confidence 21 00111 1124788765554 4568899998 9999775 47999999999999976443222 24 36
Q ss_pred hcceeeeecCCCCCCCccCHHHHHHHHHHHhcCC
Q 012096 393 WKIGWKVKKPEIGSESLVTRDEITELVKRFMDLN 426 (471)
Q Consensus 393 lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~ 426 (471)
|.++.+.. ++++|.+++.++++|+
T Consensus 320 -G~~~lv~~---------d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 320 -GTLIMSGF---------KAERVLQAVKTITEEH 343 (385)
T ss_dssp -TCCEECCS---------SHHHHHHHHHHHHTTC
T ss_pred -CceEEcCC---------CHHHHHHHHHHHHhCh
Confidence 87766654 8999999999999874
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.08 E-value=5.3e-09 Score=101.57 Aligned_cols=124 Identities=17% Similarity=0.278 Sum_probs=84.9
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCC------CcEEEEEcCCCC-cccc-----ccCCCceEeeccch-HHhhhhccc
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSG------VRFFWVSRGDTS-WFKD-----GCVDRGIVVPWCDQ-LEVLCHSSI 351 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~------~~vi~~~~~~~~-~~~~-----~~~~nv~v~~~~pq-~~lL~~~~~ 351 (471)
.+++..|+... ...+..+++++..+. .+++ .+|.... .+.. .+.+|+.+.++..+ ..++..+++
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~ 273 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLF-VVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADL 273 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEE-EESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSE
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEE-EEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCE
Confidence 66677777653 234555677777653 3333 3444321 1111 12468888888654 558999998
Q ss_pred ceeec----cCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 352 GGFWT----HCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 352 ~~~It----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+|. -|..+++.||+++|+|+|+.+. ..+...+++. +.|..++. . -+.+++.++|.++++|
T Consensus 274 --~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~-~------~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 274 --LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAE-P------FSQEQLNEVLRKALTQ 337 (374)
T ss_dssp --EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECS-S------CCHHHHHHHHHHHHHC
T ss_pred --EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCC-C------CCHHHHHHHHHHHHcC
Confidence 665 3556789999999999999754 4566777766 88988862 1 3899999999999987
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.90 E-value=8e-07 Score=87.58 Aligned_cols=78 Identities=17% Similarity=0.088 Sum_probs=57.3
Q ss_pred CCCceEeeccc---h---HHhhhhcccceeeccC----CcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeee
Q 012096 331 VDRGIVVPWCD---Q---LEVLCHSSIGGFWTHC----GLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVK 400 (471)
Q Consensus 331 ~~nv~v~~~~p---q---~~lL~~~~~~~~Ithg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~ 400 (471)
.+++.+.+|++ + ..++..+++ +|.-. .-.++.||+++|+|+|+.+. ..+...+++. +.|+.++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46899999876 2 347888888 66543 34689999999999999764 3455555533 5666553
Q ss_pred cCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 401 KPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 401 ~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+.+++.++|.++++|
T Consensus 365 ----------d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 365 ----------DANEAVEVVLYLLKH 379 (416)
T ss_dssp ----------SHHHHHHHHHHHHHC
T ss_pred ----------CHHHHHHHHHHHHhC
Confidence 678999999999987
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.77 E-value=1.1e-06 Score=92.85 Aligned_cols=122 Identities=12% Similarity=0.107 Sum_probs=75.1
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhC-----CCcEEEEEcCCC------------Cccc---c--ccCCCceEeec---
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNS-----GVRFFWVSRGDT------------SWFK---D--GCVDRGIVVPW--- 339 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~-----~~~vi~~~~~~~------------~~~~---~--~~~~nv~v~~~--- 339 (471)
.+++..|.... .+.+..+++|+..+ +.+++++-++.. +.+. . .+.++|.+.++
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~ 650 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMD 650 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccc
Confidence 56667777653 33455566666554 245555433331 0011 1 13467888874
Q ss_pred -cchHHhhh----hcccceeecc----CCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCcc
Q 012096 340 -CDQLEVLC----HSSIGGFWTH----CGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLV 410 (471)
Q Consensus 340 -~pq~~lL~----~~~~~~~Ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~ 410 (471)
+|+.++.. .+++ ||.- |--.++.||+++|+|+|+. |.......+++. +.|+.++. -
T Consensus 651 ~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p--------~ 715 (816)
T 3s28_A 651 RVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDP--------Y 715 (816)
T ss_dssp HHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECT--------T
T ss_pred cCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCC--------C
Confidence 44455443 3456 6633 3346899999999999986 444555666544 57888876 3
Q ss_pred CHHHHHHHHHHHh
Q 012096 411 TRDEITELVKRFM 423 (471)
Q Consensus 411 ~~~~l~~~i~~~l 423 (471)
+.++++++|.+++
T Consensus 716 D~e~LA~aI~~lL 728 (816)
T 3s28_A 716 HGDQAADTLADFF 728 (816)
T ss_dssp SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8899999997776
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.66 E-value=7.2e-06 Score=80.53 Aligned_cols=124 Identities=12% Similarity=0.095 Sum_probs=74.2
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCC------cccc------ccCCC-------ceEeecc
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRN-----SGVRFFWVSRGDTS------WFKD------GCVDR-------GIVVPWC 340 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~-----~~~~vi~~~~~~~~------~~~~------~~~~n-------v~v~~~~ 340 (471)
.+++..|.... ...+..+++|+.. .+.+++++-.+... .... .+.++ +.+.+|+
T Consensus 185 ~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~ 262 (413)
T 3oy2_A 185 VLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVL 262 (413)
T ss_dssp EEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCC
T ss_pred eEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcC
Confidence 67777788653 2334445555444 24677665544321 1111 13333 6666999
Q ss_pred chH---Hhhhhcccceeec--c--CCcchHHHHHHcCCceecccccccccchhhhhhhhh--------------ccee--
Q 012096 341 DQL---EVLCHSSIGGFWT--H--CGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDW--------------KIGW-- 397 (471)
Q Consensus 341 pq~---~lL~~~~~~~~It--h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l--------------G~G~-- 397 (471)
|+. .++..+++ +|. . |.-.++.||+++|+|+|+.... .....+.+.- ..|+
T Consensus 263 ~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v~~~~~~~i~~~~~~~~~~~~G~~g 336 (413)
T 3oy2_A 263 TDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYFSGDCVYKIKPSAWISVDDRDGIGG 336 (413)
T ss_dssp CHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHSCTTTSEEECCCEEEECTTTCSSCC
T ss_pred CHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHHccCcccccccccccccccccCcce
Confidence 843 37888888 663 2 3335899999999999996542 2333332110 1155
Q ss_pred eeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 398 KVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 398 ~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
.++. -+.+++.++| ++++|
T Consensus 337 l~~~--------~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 337 IEGI--------IDVDDLVEAF-TFFKD 355 (413)
T ss_dssp EEEE--------CCHHHHHHHH-HHTTS
T ss_pred eeCC--------CCHHHHHHHH-HHhcC
Confidence 5554 3899999999 99987
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.60 E-value=4.1e-06 Score=84.24 Aligned_cols=124 Identities=15% Similarity=0.071 Sum_probs=74.8
Q ss_pred EEEEEeCCCcCC-CHHHHHHHHHHHHhCCCcEEEEEcCCC---Cc---cccccCCCce-Eeeccch--HHhhhhccccee
Q 012096 285 VLYVSLGSLWSV-SSVQMDEIVAGVRNSGVRFFWVSRGDT---SW---FKDGCVDRGI-VVPWCDQ--LEVLCHSSIGGF 354 (471)
Q Consensus 285 ~I~vs~GS~~~~-~~~~~~~~~~al~~~~~~vi~~~~~~~---~~---~~~~~~~nv~-v~~~~pq--~~lL~~~~~~~~ 354 (471)
.+++..|..... ..+.+...+..+.+.+.+++++-.++. +. +....++++. +.++... ..++..+++ +
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv--~ 369 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA--I 369 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE--E
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE--E
Confidence 466777887642 233333333333333666665443321 11 1122346787 6788333 257888998 6
Q ss_pred ecc----CCcchHHHHHHcCCceecccccccccchhhhhhhhh---------cceeeeecCCCCCCCccCHHHHHHHHHH
Q 012096 355 WTH----CGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDW---------KIGWKVKKPEIGSESLVTRDEITELVKR 421 (471)
Q Consensus 355 Ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G~G~~l~~~~~~~~~~~~~~~l~~~i~~ 421 (471)
|.- |--.++.||+++|+|+|+... ......++ .- +.|+.++. -+.+++.++|.+
T Consensus 370 v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~--------~d~~~la~~i~~ 436 (485)
T 1rzu_A 370 IIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP--------VTLDGLKQAIRR 436 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS--------CSHHHHHHHHHH
T ss_pred EECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheec-ccccccccccCCcceEeCC--------CCHHHHHHHHHH
Confidence 632 334689999999999999754 23333343 31 36777765 388999999999
Q ss_pred Hh
Q 012096 422 FM 423 (471)
Q Consensus 422 ~l 423 (471)
++
T Consensus 437 ll 438 (485)
T 1rzu_A 437 TV 438 (485)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.59 E-value=7.6e-05 Score=76.55 Aligned_cols=82 Identities=13% Similarity=0.074 Sum_probs=57.6
Q ss_pred CCceEeeccchH---Hhhhhcccceeec---cCCcchHHHHHHcCCceecccccccccch-hhhhhhhhcceeeeecCCC
Q 012096 332 DRGIVVPWCDQL---EVLCHSSIGGFWT---HCGLNSTLEAAYAGVPMLTFPIMMDQVPN-SKLIVEDWKIGWKVKKPEI 404 (471)
Q Consensus 332 ~nv~v~~~~pq~---~lL~~~~~~~~It---hgG~~s~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~lG~G~~l~~~~~ 404 (471)
++|.+.+++|+. .++..+++ ||. .|+..++.||+++|+|+|++|-..=.... +..+... |+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 689999999843 46888888 762 25567899999999999998743111111 2333322 55544443
Q ss_pred CCCCccCHHHHHHHHHHHhcC
Q 012096 405 GSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 405 ~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+.+++.++|.++++|
T Consensus 508 ------~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 508 ------DDAAFVAKAVALASD 522 (568)
T ss_dssp ------SHHHHHHHHHHHHHC
T ss_pred ------CHHHHHHHHHHHhcC
Confidence 889999999999987
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.57 E-value=4.7e-05 Score=76.42 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=74.3
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHh---CCCcEEEEEcCCC---Cc---cccccCCCce-Eeeccch--HHhhhhcccc
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRN---SGVRFFWVSRGDT---SW---FKDGCVDRGI-VVPWCDQ--LEVLCHSSIG 352 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~---~~~~vi~~~~~~~---~~---~~~~~~~nv~-v~~~~pq--~~lL~~~~~~ 352 (471)
.+++..|.... ...+..+++|+.. .+.+++++-.++. +. +....++++. +.++.+. ..++..+++
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv- 369 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADV- 369 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 45556666653 2234444455444 3667666543321 11 1122346786 6788433 357889998
Q ss_pred eeecc----CCcchHHHHHHcCCceecccccccccchhhhhhhhh---------cceeeeecCCCCCCCccCHHHHHHHH
Q 012096 353 GFWTH----CGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDW---------KIGWKVKKPEIGSESLVTRDEITELV 419 (471)
Q Consensus 353 ~~Ith----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l---------G~G~~l~~~~~~~~~~~~~~~l~~~i 419 (471)
+|.- |.-.++.||+++|+|+|+... ......++ .- +.|+.++. -+.++++++|
T Consensus 370 -~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~--------~d~~~la~~i 435 (485)
T 2qzs_A 370 -ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFED--------SNAWSLLRAI 435 (485)
T ss_dssp -EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEECS--------SSHHHHHHHH
T ss_pred -EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceec-cCccccccccccceEEECC--------CCHHHHHHHH
Confidence 6632 334688999999999999754 23344443 31 36777765 3899999999
Q ss_pred HHHh
Q 012096 420 KRFM 423 (471)
Q Consensus 420 ~~~l 423 (471)
.+++
T Consensus 436 ~~ll 439 (485)
T 2qzs_A 436 RRAF 439 (485)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.52 E-value=8.9e-06 Score=79.86 Aligned_cols=114 Identities=12% Similarity=0.053 Sum_probs=74.6
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHh-C-CCcEEEEEcCCCCccccccCCCceEeeccchHH---hhhhcccceeec---
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRN-S-GVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLE---VLCHSSIGGFWT--- 356 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~-~-~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~---lL~~~~~~~~It--- 356 (471)
.+++..|.+... .+. +.++.+ . +.++++ +|..+ -......+||.+.+++|+.+ ++..+++ +|.
T Consensus 223 ~~i~~vGrl~~~-Kg~----~~~l~~~~~~~~l~i-vG~g~-~~~~~l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~ 293 (406)
T 2hy7_A 223 IHAVAVGSMLFD-PEF----FVVASKAFPQVTFHV-IGSGM-GRHPGYGDNVIVYGEMKHAQTIGYIKHARF--GIAPYA 293 (406)
T ss_dssp EEEEEECCTTBC-HHH----HHHHHHHCTTEEEEE-ESCSS-CCCTTCCTTEEEECCCCHHHHHHHHHTCSE--EECCBS
T ss_pred cEEEEEeccccc-cCH----HHHHHHhCCCeEEEE-EeCch-HHhcCCCCCEEEcCCCCHHHHHHHHHhcCE--EEECCC
Confidence 566677887642 333 333333 2 344444 34332 11112457899999998643 7888888 653
Q ss_pred cCCc-chHHHHH-------HcCCceecccccccccchhhhhhhhhcceee-eecCCCCCCCccCHHHHHHHHHHHhcCC
Q 012096 357 HCGL-NSTLEAA-------YAGVPMLTFPIMMDQVPNSKLIVEDWKIGWK-VKKPEIGSESLVTRDEITELVKRFMDLN 426 (471)
Q Consensus 357 hgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~-l~~~~~~~~~~~~~~~l~~~i~~~l~~~ 426 (471)
+.|. +++.||+ ++|+|+|+... +.+. ..|.. ++. -+.++|.++|.++++|+
T Consensus 294 ~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~--------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 294 SEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTP--------GNADSVIAAITQALEAP 353 (406)
T ss_dssp CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECT--------TCHHHHHHHHHHHHHCC
T ss_pred cccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCC--------CCHHHHHHHHHHHHhCc
Confidence 3344 5789999 99999999765 4433 45776 665 38999999999999873
No 46
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.45 E-value=9.2e-07 Score=76.12 Aligned_cols=124 Identities=10% Similarity=0.178 Sum_probs=85.6
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEcCCC-Cccc-------cccCCCceEeeccch---HHhhhhcccc
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNS-GVRFFWVSRGDT-SWFK-------DGCVDRGIVVPWCDQ---LEVLCHSSIG 352 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~-~~~vi~~~~~~~-~~~~-------~~~~~nv~v~~~~pq---~~lL~~~~~~ 352 (471)
.+++..|+... ...+..+++++..+ +.++++.-.+.. +.+. ..+++|+.+.+|+++ ..++..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 34556677653 34466778888877 466666443322 1221 124568999999997 558899998
Q ss_pred eeec---cCCc-chHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCC
Q 012096 353 GFWT---HCGL-NSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLN 426 (471)
Q Consensus 353 ~~It---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~ 426 (471)
+|. +.|. .++.||+++|+|+|+... ..+...+++. +.|+.+ . -+.+++.++|.++++|+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~-~--------~d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVINE-KTGYLV-N--------ADVNEIIDAMKKVSKNP 163 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCBT-TTEEEE-C--------SCHHHHHHHHHHHHHCT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcCC-CccEEe-C--------CCHHHHHHHHHHHHhCH
Confidence 665 3444 499999999999998753 4455556544 678777 4 28999999999999874
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.12 E-value=0.00038 Score=67.28 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=69.7
Q ss_pred CceEeeccc-hHHhhhhcccceeecc-----CCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCC
Q 012096 333 RGIVVPWCD-QLEVLCHSSIGGFWTH-----CGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGS 406 (471)
Q Consensus 333 nv~v~~~~p-q~~lL~~~~~~~~Ith-----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~ 406 (471)
++++.++.. -..++..+++ ++.- +|..++.||+++|+|+|+-|...+.+.....+.+. |.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~-~----- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV-K----- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-C-----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-C-----
Confidence 456666544 3558888888 6541 24478999999999999877666666666555434 655433 2
Q ss_pred CCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHH
Q 012096 407 ESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQE 446 (471)
Q Consensus 407 ~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~ 446 (471)
+.++|.++|.++++| .....|.+++++..+.-..
T Consensus 332 ----d~~~La~ai~~ll~d--~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 332 ----NETELVTKLTELLSV--KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp ----SHHHHHHHHHHHHHS--CCCCCHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHhH--HHHHHHHHHHHHHHHhccc
Confidence 788999999999975 3456788888877766543
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.81 E-value=0.00033 Score=73.66 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=89.3
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCc---cc------cccCCCceEeeccchHH---hhhhc
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSW---FK------DGCVDRGIVVPWCDQLE---VLCHS 349 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~---~~------~~~~~nv~v~~~~pq~~---lL~~~ 349 (471)
++.+||.||-.....++..+..-++-|++.+--++|........ +. ...++.+.+.+..|+.+ .+..+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~ 600 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLA 600 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCC
Confidence 44599999998888999999999999999999999988764311 00 01235788888888555 44556
Q ss_pred ccceeec---cCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 350 SIGGFWT---HCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 350 ~~~~~It---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
++ ++- .+|..|++|||++|||+|.++-..=--..+..+-..+|+.-.+-. +.++-.+.-.++-+|
T Consensus 601 Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~---------~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 601 DV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK---------NRQEYEDIAVKLGTD 668 (723)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS---------SHHHHHHHHHHHHHC
T ss_pred eE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC---------CHHHHHHHHHHHhcC
Confidence 66 765 789999999999999999998422111222333334465544443 555544333355555
No 49
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.80 E-value=0.0012 Score=63.04 Aligned_cols=105 Identities=14% Similarity=0.032 Sum_probs=70.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCe-EEEecCCCCCCchhhhhcHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNI-RFETIPNVIPSELVRARDFLAFVE 91 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~~ip~~~~~~~~~~~~~~~~~~ 91 (471)
|||+|+...+.|++.-...+.++|++++.+.+|++++.+.+.+.+.... .+ ++..++... ....
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p----~i~~v~~~~~~~-----~~~~------ 65 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMP----EVNEAIPMPLGH-----GALE------ 65 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCT----TEEEEEEC------------C------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC----ccCEEEEecCCc-----cccc------
Confidence 5899999999999999999999999965699999999998888776542 34 344443110 0000
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEE
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVAS 140 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~ 140 (471)
-..+..+.+.++.. +||++|.-........++...|+|..+
T Consensus 66 ------~~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 66 ------IGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ------HHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ------hHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 01234456666543 799999333334455678888999744
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.71 E-value=0.00034 Score=58.86 Aligned_cols=122 Identities=9% Similarity=0.154 Sum_probs=73.8
Q ss_pred eEEEEEeCCCcCCCHHHHHHHHHHHHhCC----CcEEEEEcCCC--Cccc---cccCCCceEeeccchH---Hhhhhccc
Q 012096 284 SVLYVSLGSLWSVSSVQMDEIVAGVRNSG----VRFFWVSRGDT--SWFK---DGCVDRGIVVPWCDQL---EVLCHSSI 351 (471)
Q Consensus 284 ~~I~vs~GS~~~~~~~~~~~~~~al~~~~----~~vi~~~~~~~--~~~~---~~~~~nv~v~~~~pq~---~lL~~~~~ 351 (471)
+++++..|.... ...+..+++++..+. .++++ +|... +.+. ...+-++.+ +|+|+. .++..+++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i-~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLL-KGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEE-ECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEE-EeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCE
Confidence 367778888754 334566677777653 33333 34322 1111 122337788 999864 47888888
Q ss_pred ceeecc----CCcchHHHHHHcCC-ceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 352 GGFWTH----CGLNSTLEAAYAGV-PMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 352 ~~~Ith----gG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+|.- |.-.++.||+++|+ |+|+... .......+.+. +. .++. -+.+++.++|.++++|
T Consensus 78 --~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~~-~~--~~~~--------~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 78 --YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALDE-RS--LFEP--------NNAKDLSAKIDWWLEN 140 (166)
T ss_dssp --EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSSG-GG--EECT--------TCHHHHHHHHHHHHHC
T ss_pred --EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccCC-ce--EEcC--------CCHHHHHHHHHHHHhC
Confidence 6642 33469999999996 9999332 22222223322 22 3333 2899999999999987
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.71 E-value=0.0011 Score=63.25 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=76.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCe-EEEecCCCCCCchhhhhcHHH
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNI-RFETIPNVIPSELVRARDFLA 88 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~-~~~~ip~~~~~~~~~~~~~~~ 88 (471)
.+++||+|+-..+.|++.-...+.++|++++.+.+|++++.+.+.+.++... .+ ++..++..- ...
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p----~vd~vi~~~~~~---------~~~ 72 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNP----NIDELIVVDKKG---------RHN 72 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCT----TCSEEEEECCSS---------HHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC----CccEEEEeCccc---------ccc
Confidence 4568999999999999999999999999966799999999999988887652 34 354554210 000
Q ss_pred HHHHHHHhchHHHHHHHHHhhhcCCCc-eEEEEcCchhhHHHHHhhcCCCeEEE
Q 012096 89 FVESVSTKMEAPFEKVLDFLQVEAPVV-SAIIVDTFLAWAVDVGNRRNIPVASF 141 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~l~~~~~~~-D~vI~D~~~~~~~~~A~~lgIP~v~~ 141 (471)
.+. .+..++++++.. +| |++|.-....-...++...|+|..+-
T Consensus 73 ~~~--------~~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 73 SIS--------GLNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp HHH--------HHHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred cHH--------HHHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEEe
Confidence 011 122344555543 69 99996655555666888889997663
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.67 E-value=0.0002 Score=68.14 Aligned_cols=145 Identities=14% Similarity=0.078 Sum_probs=96.1
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHh---hhhcccceeeccCCc-
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEV---LCHSSIGGFWTHCGL- 360 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~l---L~~~~~~~~IthgG~- 360 (471)
.+++-.|++.. .+.+. .+ ..+.+++ .+|..++. ..+ ||.+.+|+|+.++ |..++.+++.+-+..
T Consensus 179 ~~i~yaG~l~k--~~~L~----~l-~~~~~f~-ivG~G~~~---~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~ 246 (339)
T 3rhz_A 179 REIHFPGNPER--FSFVK----EW-KYDIPLK-VYTWQNVE---LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDK 246 (339)
T ss_dssp EEEEECSCTTT--CGGGG----GC-CCSSCEE-EEESCCCC---CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGH
T ss_pred cEEEEeCCcch--hhHHH----hC-CCCCeEE-EEeCCccc---CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchh
Confidence 56677888874 11111 11 2345544 45544332 345 9999999998764 445566666543432
Q ss_pred --------chHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHH
Q 012096 361 --------NSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKA 432 (471)
Q Consensus 361 --------~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 432 (471)
+-+.|++++|+|+|+.+ ...++..+++. |+|+.++ +.+++.++|.++..+ +...
T Consensus 247 ~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~----------~~~e~~~~i~~l~~~---~~~~ 308 (339)
T 3rhz_A 247 EYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK----------DVEEAIMKVKNVNED---EYIE 308 (339)
T ss_dssp HHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES----------SHHHHHHHHHHCCHH---HHHH
T ss_pred HHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC----------CHHHHHHHHHHhCHH---HHHH
Confidence 34789999999999744 56788888877 9998875 457888888886543 4578
Q ss_pred HHHHHHHHHHHHHHhHhcCCCcHHHHHHHHH
Q 012096 433 MSKRAREVQEICQEAVAENGSSITNFDAFLN 463 (471)
Q Consensus 433 ~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~ 463 (471)
|++|+++.+++++. |......+.+.+.
T Consensus 309 m~~na~~~a~~~~~----~~f~k~~l~~~~~ 335 (339)
T 3rhz_A 309 LVKNVRSFNPILRK----GFFTRRLLTESVF 335 (339)
T ss_dssp HHHHHHHHTHHHHT----THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc----cHHHHHHHHHHHH
Confidence 99999999988874 4455555544443
No 53
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.56 E-value=0.00092 Score=67.71 Aligned_cols=131 Identities=10% Similarity=0.007 Sum_probs=87.4
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEE--cCCCCcccc---------ccCCCceEeeccchHH---hhhh
Q 012096 283 SSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVS--RGDTSWFKD---------GCVDRGIVVPWCDQLE---VLCH 348 (471)
Q Consensus 283 ~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~--~~~~~~~~~---------~~~~nv~v~~~~pq~~---lL~~ 348 (471)
+.++|.+|.......+..+....+.+++.+..++|.. +... +... .+.+.+.+.+.+|+.+ .+..
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 3589999999888889999998888999888888753 3221 1111 1235677888888654 4577
Q ss_pred cccceeec---cCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceee-eecCCCCCCCccCHHHHHHHHHHHhc
Q 012096 349 SSIGGFWT---HCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWK-VKKPEIGSESLVTRDEITELVKRFMD 424 (471)
Q Consensus 349 ~~~~~~It---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~-l~~~~~~~~~~~~~~~l~~~i~~~l~ 424 (471)
+++ |+. .+|..|++||+++|||+|+.+-..=.-..+..+-..+|+.-. +.. +.++..+...++.+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---------d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---------TVDEYVERAVRLAE 587 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---------SHHHHHHHHHHHHH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---------CHHHHHHHHHHHhC
Confidence 777 653 378899999999999999987432111122221123355542 433 77787777778888
Q ss_pred C
Q 012096 425 L 425 (471)
Q Consensus 425 ~ 425 (471)
|
T Consensus 588 D 588 (631)
T 3q3e_A 588 N 588 (631)
T ss_dssp C
T ss_pred C
Confidence 7
No 54
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.44 E-value=0.0028 Score=54.91 Aligned_cols=122 Identities=12% Similarity=0.116 Sum_probs=76.4
Q ss_pred EEEEeCCCc-C-CCHHHHHHHHHHHH---hC-CCcEEEEEcCCC----Cccc---cccCCCceE-eeccchH---Hhhhh
Q 012096 286 LYVSLGSLW-S-VSSVQMDEIVAGVR---NS-GVRFFWVSRGDT----SWFK---DGCVDRGIV-VPWCDQL---EVLCH 348 (471)
Q Consensus 286 I~vs~GS~~-~-~~~~~~~~~~~al~---~~-~~~vi~~~~~~~----~~~~---~~~~~nv~v-~~~~pq~---~lL~~ 348 (471)
+++..|+.. . .....+...+..+. +. +.++++. |... +.+. ...+ ++.+ .+++++. .++..
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~-G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ 115 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIII-GKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS 115 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEE-CCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEE-CCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHH
Confidence 566778776 3 23444444444442 21 3455443 3322 1111 1223 8999 9999843 47888
Q ss_pred cccceeeccC---C-cchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhc
Q 012096 349 SSIGGFWTHC---G-LNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMD 424 (471)
Q Consensus 349 ~~~~~~Ithg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~ 424 (471)
+++ +|.-. | ..++.||+++|+|+|+... ......+ +. +.|+.++. -+.+++.++|.++++
T Consensus 116 ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--------~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 116 VDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--------GDPGELANAILKALE 179 (200)
T ss_dssp CSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT--------TCHHHHHHHHHHHHH
T ss_pred CCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC--------CCHHHHHHHHHHHHh
Confidence 888 66432 3 4688999999999998754 2344444 34 67887775 389999999999998
Q ss_pred -C
Q 012096 425 -L 425 (471)
Q Consensus 425 -~ 425 (471)
|
T Consensus 180 ~~ 181 (200)
T 2bfw_A 180 LS 181 (200)
T ss_dssp CC
T ss_pred cC
Confidence 7
No 55
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=97.30 E-value=0.0081 Score=56.61 Aligned_cols=48 Identities=10% Similarity=0.110 Sum_probs=43.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
|||+|+-..+.|++.-...+.++|++++.+.+|++++.+.+.+.+...
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 589999999999999999999999996669999999999988887654
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.62 E-value=0.012 Score=57.60 Aligned_cols=94 Identities=15% Similarity=-0.053 Sum_probs=62.6
Q ss_pred EEEEcCCCCccccccCCCceEeeccchHH---hhhhcccceeecc---CCc-chHHHHHHcCCceecccccccccchhhh
Q 012096 316 FWVSRGDTSWFKDGCVDRGIVVPWCDQLE---VLCHSSIGGFWTH---CGL-NSTLEAAYAGVPMLTFPIMMDQVPNSKL 388 (471)
Q Consensus 316 i~~~~~~~~~~~~~~~~nv~v~~~~pq~~---lL~~~~~~~~Ith---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~ 388 (471)
++.+|............++.+.+++|+.+ ++..+++ ||.- =|. .++.||+++|+|+|+ -..+ ....
T Consensus 279 l~ivG~~~~~~~l~~~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~ 351 (413)
T 2x0d_A 279 IISVGEKHKDIALGKGIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDL 351 (413)
T ss_dssp EEEEESCCCCEEEETTEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCG
T ss_pred EEEEcCCchhhhcCCcCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchh
Confidence 34455433222122345788999998644 7888898 6642 244 467999999999998 2221 2344
Q ss_pred hhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 389 IVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 389 v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
+++. ..|+.++. -++++|+++|.++++|
T Consensus 352 v~~~-~~G~lv~~--------~d~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 352 SNWH-SNIVSLEQ--------LNPENIAETLVELCMS 379 (413)
T ss_dssp GGTB-TTEEEESS--------CSHHHHHHHHHHHHHH
T ss_pred hhcC-CCEEEeCC--------CCHHHHHHHHHHHHcC
Confidence 4433 46877765 3899999999999987
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.29 E-value=0.11 Score=52.59 Aligned_cols=130 Identities=12% Similarity=0.109 Sum_probs=72.6
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHh---CCCcEEEEEcCCC------CccccccCCCceEeeccchH---Hhhhhcccc
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRN---SGVRFFWVSRGDT------SWFKDGCVDRGIVVPWCDQL---EVLCHSSIG 352 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~---~~~~vi~~~~~~~------~~~~~~~~~nv~v~~~~pq~---~lL~~~~~~ 352 (471)
.+++..|.... .+.+..+++|+.+ .+.++++...++. .......+.++.+..+.++. .+++.+++
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 45555666653 2334455555544 4567666544432 11122346788888777653 36788888
Q ss_pred eeecc---CCc-chHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCC---CccCHHHHHHHHHHHhc
Q 012096 353 GFWTH---CGL-NSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSE---SLVTRDEITELVKRFMD 424 (471)
Q Consensus 353 ~~Ith---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~---~~~~~~~l~~~i~~~l~ 424 (471)
||.- =|. .+++||+++|+|+|+.... .....+.+. .-|..... ..... ...+.+.|.++|+++++
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~dg-~~G~~~~~-~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIEG-KTGFHMGR-LSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCBT-TTEEECCC-CCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeCC-CCcccccc-CCCceeEECCCCHHHHHHHHHHHHH
Confidence 7643 233 4889999999999986542 223333321 22332221 00000 01367889999998775
No 58
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.64 E-value=0.37 Score=42.86 Aligned_cols=114 Identities=15% Similarity=0.082 Sum_probs=65.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVE 91 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~ 91 (471)
|||||+.-=-+. |.--+.+|+++|++ .| +|+++.|...+.-+...-.....+++..+..... ..-.+.+..-..
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~ 74 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKS--LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVH 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHH
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHh--cC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHH
Confidence 578888766554 45557888999999 88 9999999876655544333334556555442210 111122222222
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcC----------ch---hhHHHHHhhcCCCeEEEec
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT----------FL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~----------~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
.. +..++.. .+||+||+.. ++ ..++.-|..+|||.|.++.
T Consensus 75 la-------l~~l~~~-----~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 LG-------YRVILEE-----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-------HHTTTTT-----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-------HHHhcCC-----CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 22 1222211 2699999753 22 3444556778999999864
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=93.81 E-value=0.28 Score=43.75 Aligned_cols=114 Identities=10% Similarity=-0.008 Sum_probs=64.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHH
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAF 89 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 89 (471)
+++||||+.-=-+. |.--+.+|+++|++ +|+|+++.|...+.-+...-.....+++..+.++. ..-.+.+...
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~---~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~---~~v~GTPaDC 81 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD---LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLENGM---ISVEGTPTDC 81 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT---TSEEEEEEESSCCTTCTTCCCCSSCEEEEECTTSC---EEESSCHHHH
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh---cCCEEEEecCCCCcCcccceecCCCeEEEEecCCe---EEECCCHHHH
Confidence 45589888776554 45557788888877 78999999987665544433333456666654322 1111222222
Q ss_pred HHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCc----------hhhHH---HHHhhcCCCeEEEec
Q 012096 90 VESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTF----------LAWAV---DVGNRRNIPVASFWS 143 (471)
Q Consensus 90 ~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~----------~~~~~---~~A~~lgIP~v~~~~ 143 (471)
.... +..+.. .+||+||+... +.... .-|..+|||.|.++.
T Consensus 82 V~la-----------l~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 82 VHLA-----------ITGVLP--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp HHHH-----------TTTTSS--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred HHHH-----------HHHhcC--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 2222 111211 26999997532 22222 334557999999865
No 60
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=92.62 E-value=0.7 Score=41.26 Aligned_cols=114 Identities=15% Similarity=0.083 Sum_probs=61.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVE 91 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~ 91 (471)
|.|||+.-=-+. +---+.+|+++|++ .| +|+++.|...+.-+...-.....+++..+.... ...-.+.+..-..
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~--~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~--~~~v~GTPaDCV~ 74 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKS--LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF--YTVIDGTPADCVH 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE--EEETTCCHHHHHH
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHh--CC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc--eeecCCChHHHHh
Confidence 567777654443 33447778899999 88 499999876665444332223345555443211 0000122222222
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcC----------ch---hhHHHHHhhcCCCeEEEec
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT----------FL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~----------~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
.. +..++.. .+||+||+.. ++ ..++.=|..+|||.|+++-
T Consensus 75 la-------l~~~l~~-----~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 75 LG-------YRVILEE-----KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HH-------HHTTTTT-----CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hh-------hhhhcCC-----CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 21 1122221 3699999832 23 4455567778999999864
No 61
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=91.76 E-value=2.6 Score=37.30 Aligned_cols=112 Identities=13% Similarity=0.003 Sum_probs=65.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCC----CchhhhhcHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIP----SELVRARDFLA 88 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~----~~~~~~~~~~~ 88 (471)
||||+.-=-+. |.--+..|+++|++ .| +|+++.|...+.-+...-.....+++..++.+.+ ....-.+.+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaD 76 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQ--FG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPAD 76 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHH
Confidence 46666554443 33447888999999 88 8999999876655544333344677777754210 11111223333
Q ss_pred HHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcC----------ch---hhHHHHHhhcCCCeEEEec
Q 012096 89 FVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT----------FL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~----------~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
-...... +. .+||+||+.. ++ ..++.=|..+|||.|.++.
T Consensus 77 CV~lal~------------l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 77 CVALGLH------------LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHH------------HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHc------------CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 3332221 22 3799999743 22 3444456678999999854
No 62
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=90.28 E-value=2.6 Score=37.38 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=63.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCC-CchhhhhcHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIP-SELVRARDFLAFVE 91 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~-~~~~~~~~~~~~~~ 91 (471)
||||+.-=-+. |.--+.+|+++|++ .| +|+++.|...+.-+...-.....+++..++.+.. ....-.+.+..-..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~ 76 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSE--EH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVK 76 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHH
Confidence 46666544433 34447888999999 88 8999999876655544333334566666643200 00111122333322
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcC----------ch---hhHHHHHhhcCCCeEEEec
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT----------FL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~----------~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
... ..++ . .+||+||+.. ++ ..++.=|..+|||.|.++.
T Consensus 77 lal-------~~l~---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 77 LAY-------NVVM---D---KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHH-------HTTS---T---TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-------Hhhc---c---CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 221 2222 1 2699999743 22 3444456678999999854
No 63
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=90.08 E-value=2.3 Score=42.11 Aligned_cols=106 Identities=14% Similarity=0.126 Sum_probs=66.5
Q ss_pred eeccchHH---hhhhcccceeec---cCCcc-hHHHHHHcCC-----ceecccccccccchhhhhhhhhcceeeeecCCC
Q 012096 337 VPWCDQLE---VLCHSSIGGFWT---HCGLN-STLEAAYAGV-----PMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEI 404 (471)
Q Consensus 337 ~~~~pq~~---lL~~~~~~~~It---hgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~ 404 (471)
.+++++.+ ++..+++ ||. .=|+| +..||+++|+ |+|+--+.+ .+..+ .-|+.++.
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~p--- 403 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVNP--- 403 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEECT---
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEECC---
Confidence 47777654 6788888 664 34664 8999999998 666543322 12222 23566665
Q ss_pred CCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHhh
Q 012096 405 GSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISLA 468 (471)
Q Consensus 405 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (471)
.+.++++++|.++|+++. ..-+++.++..+..++ -+.....+++++.+...
T Consensus 404 -----~d~~~lA~ai~~lL~~~~---~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 404 -----YDRDEVAAALDRALTMSL---AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp -----TCHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred -----CCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 388999999999998642 2233333444444332 36677778888777653
No 64
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=90.07 E-value=1.7 Score=38.51 Aligned_cols=128 Identities=9% Similarity=-0.030 Sum_probs=68.9
Q ss_pred ccccCCCCcEEEEEcCC--CccChHHHHHHHHHHHhcCCCcEEEEEECc----c-----ch--hhh----cCCC--CCCC
Q 012096 5 RMKATGRMCHIVALPYP--GRGHINPMMNLCKLLVSRNPNVFITFVVTE----E-----WL--SFI----GSGH--GNHN 65 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~--~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~----~-----~~--~~~----~~~~--~~~~ 65 (471)
+.+--++|++.+|++.. ..|=..-.+.|++.|++ +|.+|.++=+- . .. ..+ .... ....
T Consensus 13 ~~~~~~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~--~G~~V~~fKPv~~g~~~~~~~~~D~~~~~~~~~~~~~g~~~~ 90 (242)
T 3qxc_A 13 GRENLYFQGHMLFISATNTNAGKTTCARLLAQYCNA--CGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLK 90 (242)
T ss_dssp ------CCCEEEEEEESSTTSSHHHHHHHHHHHHHH--TTCCEEEECCEECSCCTTTCCCSHHHHHHHHHHTTCTTCCHH
T ss_pred hhhHHhhcCcEEEEEeCCCCCcHHHHHHHHHHHHHh--CCCceEEEeeeecCCcccCCCCchHHHHHHHHHHHhCCCChH
Confidence 34445667777777664 55889999999999999 99999998431 0 00 011 1110 0000
Q ss_pred CeEEEecCCCCCCchhhhhcHHHHHHHHHH-----hchHHHHHHHHHhhhcCCCceEEEEcCch---------hhHHHHH
Q 012096 66 NIRFETIPNVIPSELVRARDFLAFVESVST-----KMEAPFEKVLDFLQVEAPVVSAIIVDTFL---------AWAVDVG 131 (471)
Q Consensus 66 ~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ll~~l~~~~~~~D~vI~D~~~---------~~~~~~A 131 (471)
.+..+.+..... ..+..... .....+.+.++++.. ++|+||+|... .....+|
T Consensus 91 ~~~p~~~~~p~s----------p~~aa~~~g~~~~i~~~~I~~~~~~l~~---~~D~vlIEGagGl~~pl~~~~~~adlA 157 (242)
T 3qxc_A 91 DISFYRYHKVSA----------PLIAQQEEDPNAPIDTDNLTQRLHNFTK---TYDLVIVEGAGGLCVPITLEENMLDFA 157 (242)
T ss_dssp HHCCEECSSSSC----------HHHHHHHHCTTCCCCHHHHHHHHHHGGG---TCSEEEEECCSCTTCBSSSSCBHHHHH
T ss_pred HeeeEEECCCCC----------hHHHHHHcCCCCcCCHHHHHHHHHHHHh---cCCEEEEECCCCccccccccchHHHHH
Confidence 011111111110 01111111 122345666666664 69999998742 2347899
Q ss_pred hhcCCCeEEEecchHH
Q 012096 132 NRRNIPVASFWSMSAS 147 (471)
Q Consensus 132 ~~lgIP~v~~~~~~~~ 147 (471)
+.++.|++.+......
T Consensus 158 ~~l~~pVILV~~~~lg 173 (242)
T 3qxc_A 158 LKLKAKMLLISHDNLG 173 (242)
T ss_dssp HHHTCEEEEEECCSTT
T ss_pred HHcCCCEEEEEcCCCc
Confidence 9999999998766443
No 65
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=89.97 E-value=3.1 Score=37.62 Aligned_cols=114 Identities=14% Similarity=0.017 Sum_probs=63.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVES 92 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~ 92 (471)
||||+.-=-+. +.--+.+|+++|++ .| +|+++.|...+.-+...-.....+++..++.+-.....-.+.+......
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~--~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~l 76 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALS--LG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYL 76 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGG--GS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHH
Confidence 46666554443 33447888999999 88 8999999876655544333333455555532100011111223333322
Q ss_pred HHHhchHHHHHHHHHhhhcCCCceEEEEcC-----------ch---hhHHHHHhhcCCCeEEEecc
Q 012096 93 VSTKMEAPFEKVLDFLQVEAPVVSAIIVDT-----------FL---AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 93 ~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~-----------~~---~~~~~~A~~lgIP~v~~~~~ 144 (471)
. +..+ . .+||+||+.. ++ ..++.=|..+|||.|.++..
T Consensus 77 a-------l~~l-----~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 77 A-------TFGL-----G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp H-------HHHH-----T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred H-------HhcC-----C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 2 2222 1 2799999742 12 33444466689999998653
No 66
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=88.57 E-value=2.3 Score=42.06 Aligned_cols=111 Identities=12% Similarity=0.061 Sum_probs=73.1
Q ss_pred CceEeeccch---HHhhhhcccceeec---cCCcc-hHHHHHHcC---CceecccccccccchhhhhhhhhcceeeeecC
Q 012096 333 RGIVVPWCDQ---LEVLCHSSIGGFWT---HCGLN-STLEAAYAG---VPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKP 402 (471)
Q Consensus 333 nv~v~~~~pq---~~lL~~~~~~~~It---hgG~~-s~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~ 402 (471)
.|++.+.+|+ ..++..+++ |+. +=|+| +..|++++| .|+|+--+. ..+.-+. .-|+.++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~a----Ga~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETC----GAAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTB----TTHHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCC----CCHHHhC---CCEEEECC-
Confidence 4677788876 347778888 553 36887 468999996 555544222 1222221 24777776
Q ss_pred CCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHhh
Q 012096 403 EIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISLA 468 (471)
Q Consensus 403 ~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (471)
.+.++++++|.++|+++. .+-+++.+++.+..+ ..+...-++.|++.|...
T Consensus 423 -------~D~~~lA~AI~~aL~m~~---~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 423 -------FDLVEQAEAISAALAAGP---RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp -------TBHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhhc
Confidence 489999999999998743 344555555555554 347777888888888763
No 67
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=88.17 E-value=5.3 Score=34.98 Aligned_cols=111 Identities=8% Similarity=-0.018 Sum_probs=62.0
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc-cch---hhhcCCCCCCCCeEEEecCCCCCCchh
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE-EWL---SFIGSGHGNHNNIRFETIPNVIPSELV 81 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~-~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~ 81 (471)
...+.+||||+|+.+++.. -+.++.++|.+...+++|..+.+. ... +...+. ++.+..++..-.
T Consensus 16 ~~~~~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-----gIp~~~~~~~~~---- 83 (229)
T 3auf_A 16 LYFQGHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-----GVDALHMDPAAY---- 83 (229)
T ss_dssp SSCBTTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-----TCEEEECCGGGS----
T ss_pred ccccCCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-----CCCEEEECcccc----
Confidence 4455678899999877742 366777888872117888666644 211 233334 777765542110
Q ss_pred hhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 82 RARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
.+ . ...+..+.+.++++ +||+||+-.+. .....+-..+...++-+.+
T Consensus 84 --~~-r-------~~~~~~~~~~l~~~-----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 84 --PS-R-------TAFDAALAERLQAY-----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp --SS-H-------HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred --cc-h-------hhccHHHHHHHHhc-----CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 00 0 11112233444444 59999988775 4444455556566666644
No 68
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=86.56 E-value=5.3 Score=33.36 Aligned_cols=133 Identities=16% Similarity=0.108 Sum_probs=65.5
Q ss_pred chhccccccCCCCeEEEEEeCC-CcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchH-Hhh-h
Q 012096 271 DNYFHWLDSQPDSSVLYVSLGS-LWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQL-EVL-C 347 (471)
Q Consensus 271 ~~~~~~l~~~~~~~~I~vs~GS-~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~-~lL-~ 347 (471)
.++-++|.... ...||.|. ... .....++..+.+-++|-+++.......+..-....++++.+.. .++ .
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i~~~~~~~Rk~~m~~ 106 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPIVTGLGSARDNINAL 106 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC-----CCTTCSEEEECCCCSSSCCCCGG
T ss_pred HHHHHHHHHCC---CEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeEEcCCHHHHHHHHHH
Confidence 34445665543 56666665 442 2334444444555666666532211111111123445555643 233 3
Q ss_pred hcccceeeccCCcchHHHH---HHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhc
Q 012096 348 HSSIGGFWTHCGLNSTLEA---AYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMD 424 (471)
Q Consensus 348 ~~~~~~~IthgG~~s~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~ 424 (471)
.++. .++--||.||..|+ +.+++|++++|.+. .....+... -.....-. -+++++.+.+.+.+.
T Consensus 107 ~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~--------~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 107 SSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVA--------ADVAGAIAAVKQLLA 173 (176)
T ss_dssp GCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEE--------SSHHHHHHHHHHHHH
T ss_pred hCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEc--------CCHHHHHHHHHHHHH
Confidence 4443 45556889986655 77999999999832 111112211 12222221 178888777776653
No 69
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=85.42 E-value=9.1 Score=34.00 Aligned_cols=111 Identities=14% Similarity=0.061 Sum_probs=63.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhh-hcHHHHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRA-RDFLAFVE 91 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~-~~~~~~~~ 91 (471)
||||+.-=-+. |.--+.+|+++|++ .| +|+++.|...+.-+...-.....++...+... ...-. +.+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~--~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~~---~~~v~~GTPaDCV~ 74 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALRE--FA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDNG---DIAVQMGTPTDCVY 74 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTTS---CEEEETCCHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHh--CC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCCC---CeEECCCCHHHHHH
Confidence 47777655443 44457788999988 76 99999998766555443333335666555211 11111 23333333
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcC----------ch---hhHHHHHhhcCCCeEEEec
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDT----------FL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~----------~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
... ..++ . .+||+||+.. ++ ..++.=|..+|||.|.++.
T Consensus 75 lal-------~~ll---~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 75 LGV-------NALM---R---PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHH-------HTTS---S---SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHH-------hhcc---C---CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 222 1122 1 3699999743 22 2333445568999999854
No 70
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=83.67 E-value=8.5 Score=32.69 Aligned_cols=96 Identities=13% Similarity=0.157 Sum_probs=61.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccc------hhhhcCCCCCCCCeEEEecCCCCCCchhhhhcH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEW------LSFIGSGHGNHNNIRFETIPNVIPSELVRARDF 86 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 86 (471)
-.|.++++.+.|=..-.+.+|.+... +|++|.|+..-.. .+.++.. ++.+.....++.-.. .+.
T Consensus 29 g~i~v~tG~GkGKTTaA~GlalRA~g--~G~rV~~vQF~Kg~~~~gE~~~l~~L-----~v~~~~~g~gf~~~~---~~~ 98 (196)
T 1g5t_A 29 GIIIVFTGNGKGKTTAAFGTAARAVG--HGKNVGVVQFIKGTWPNGERNLLEPH-----GVEFQVMATGFTWET---QNR 98 (196)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHH--TTCCEEEEESSCCSSCCHHHHHHGGG-----TCEEEECCTTCCCCG---GGH
T ss_pred ceEEEECCCCCCHHHHHHHHHHHHHH--CCCeEEEEEeeCCCCCccHHHHHHhC-----CcEEEEcccccccCC---CCc
Confidence 46889999999999999999999999 9999999965432 1233433 467777766553211 111
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch
Q 012096 87 LAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL 124 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~ 124 (471)
..- .......++...+.+.. .++|+||.|.+.
T Consensus 99 ~~~----~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 99 EAD----TAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred HHH----HHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 111 11223344555555543 279999999875
No 71
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=83.56 E-value=3.3 Score=35.17 Aligned_cols=82 Identities=17% Similarity=0.054 Sum_probs=50.9
Q ss_pred EEEEEc-CCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHHH
Q 012096 14 HIVALP-YPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVES 92 (471)
Q Consensus 14 ~il~~~-~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~ 92 (471)
.|+|.. -++.|=..-...||..|++ +|++|.++-.........-....+.++.+...+.
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~--~g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~~------------------ 62 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSR--SGYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAAS------------------ 62 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHTTSCCSSEEEECCS------------------
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH--CCCeEEEEECCCCCCHHHHHhcCCCCCcEEecCc------------------
Confidence 344442 3678999999999999999 9999999876432221111111122444443321
Q ss_pred HHHhchHHHHHHHHHhhhcCCCceEEEEcCch
Q 012096 93 VSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL 124 (471)
Q Consensus 93 ~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~ 124 (471)
..+.++++.+.. .+|+||.|.-.
T Consensus 63 ------~~l~~~l~~l~~---~yD~viiD~~~ 85 (206)
T 4dzz_A 63 ------EKDVYGIRKDLA---DYDFAIVDGAG 85 (206)
T ss_dssp ------HHHHHTHHHHTT---TSSEEEEECCS
T ss_pred ------HHHHHHHHHhcC---CCCEEEEECCC
Confidence 335566666663 59999999754
No 72
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=82.78 E-value=7.9 Score=33.50 Aligned_cols=104 Identities=13% Similarity=0.076 Sum_probs=56.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCc--EEEEEECcc-ch---hhhcCCCCCCCCeEEEecCCCCCCchhhhhc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNV--FITFVVTEE-WL---SFIGSGHGNHNNIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh--~Vt~~~~~~-~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~ 85 (471)
|+||+|+.+++.+ -+.++.++|.+ .+| +|..+.+.. .. +...+. ++.+..++..-. .+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~--~~~~~~i~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~~~~~------~~ 64 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIES--GKVNASIELVISDNPKAYAIERCKKH-----NVECKVIQRKEF------PS 64 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHT--TSSCEEEEEEEESCTTCHHHHHHHHH-----TCCEEECCGGGS------SS
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHh--CCCCCeEEEEEeCCCChHHHHHHHHc-----CCCEEEeCcccc------cc
Confidence 5789988777643 36677788888 777 776555432 11 223333 566655432100 00
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
....++.+.+.++++ ++|++|+-.+. .....+-..+.-.++-++++
T Consensus 65 --------r~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 65 --------KKEFEERMALELKKK-----GVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --------HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --------hhhhhHHHHHHHHhc-----CCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 011112233444443 59999988765 43444455555566766443
No 73
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=81.70 E-value=0.9 Score=44.04 Aligned_cols=42 Identities=12% Similarity=0.133 Sum_probs=32.0
Q ss_pred CCCCcEEEEEcCC-Cc----cChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 9 TGRMCHIVALPYP-GR----GHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 9 ~~~~~~il~~~~~-~~----GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+..+|||+++... .+ |=......+|++|++ +||+|++++...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~--~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDN--KKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT--TTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHH--cCCceEEEEecC
Confidence 3556899888754 22 333568899999999 999999999863
No 74
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=81.32 E-value=1.2 Score=44.76 Aligned_cols=40 Identities=8% Similarity=0.008 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCC------CccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYP------GRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~------~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
...|||+++++- +.|=-.-+-+|.++|++ +||+|++++|.
T Consensus 7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~--~G~~V~Vi~P~ 52 (536)
T 3vue_A 7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAA--NGHRVMVISPR 52 (536)
T ss_dssp -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHT--TTCEEEEEEEC
T ss_pred CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHH--cCCeEEEEecC
Confidence 446899999752 12322346689999999 99999999964
No 75
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=81.27 E-value=9.7 Score=33.83 Aligned_cols=125 Identities=10% Similarity=0.014 Sum_probs=66.5
Q ss_pred CCcEEEEEcCC--CccChHHHHHHHHHHHhcCCCcEEEEEECcc--------chhhhcCCCCCCCCeEEEecCCCCCCch
Q 012096 11 RMCHIVALPYP--GRGHINPMMNLCKLLVSRNPNVFITFVVTEE--------WLSFIGSGHGNHNNIRFETIPNVIPSEL 80 (471)
Q Consensus 11 ~~~~il~~~~~--~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~--------~~~~~~~~~~~~~~~~~~~ip~~~~~~~ 80 (471)
++|+.+|++.. ..|=..-.+.|++.|++ +|++|.++=+-. ....+............+.++....+
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~--~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g~~~~~~~~~~~~p~sP-- 99 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQ--AGIDVAVCKPVQTGTARGDDDLAEVGRLAGVTQLAGLARYPQPMAP-- 99 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHH--TTCCEEEEEEEECCGGGTCCHHHHHHHHHCCCEEEEEEECSSSSCH--
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHH--CCCeEEEEeeeecCCCCCCHHHHHHHHHcCCCCCCCCeeECCCCCh--
Confidence 44555555543 55889999999999999 999999985311 01111110000001122222211110
Q ss_pred hhhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch----------hhHHHHHhhcCCCeEEEecchH
Q 012096 81 VRARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL----------AWAVDVGNRRNIPVASFWSMSA 146 (471)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~----------~~~~~~A~~lgIP~v~~~~~~~ 146 (471)
......+.........+.+.++++. .++|+||+|... .....+|+.++.|+|.+.....
T Consensus 100 ----~~aa~~~~~~~~~~~~i~~~~~~l~---~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~~ 168 (251)
T 3fgn_A 100 ----AAAAEHAGMALPARDQIVRLIADLD---RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTADL 168 (251)
T ss_dssp ----HHHHHHTTCCCCCHHHHHHHHHTTC---CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSST
T ss_pred ----HHHHHHcCCCCCCHHHHHHHHHHHH---hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCCC
Confidence 0000000000011234555666665 369999998742 2346799999999999866543
No 76
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=79.86 E-value=7.3 Score=36.00 Aligned_cols=36 Identities=19% Similarity=0.230 Sum_probs=28.0
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+++||||+|+..+..+ +...++|.+ .||+|..+.+.
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~--~~~~v~~Vvt~ 36 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIE--DGYDVIGVVTQ 36 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHH--TTCEEEEEECC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHH--CCCcEEEEEeC
Confidence 3689999999888644 355688888 89999877764
No 77
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=79.19 E-value=16 Score=31.50 Aligned_cols=104 Identities=6% Similarity=-0.013 Sum_probs=57.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCC--CcEEEEEECcc-c---hhhhcCCCCCCCCeEEEecCCCCCCchhhhhc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNP--NVFITFVVTEE-W---LSFIGSGHGNHNNIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~r--Gh~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~ 85 (471)
|+||+++..++.+ -+.++.++|.+ . +|+|..+.+.. . .+...+. ++.+..++..-. .+
T Consensus 3 m~ki~vl~sG~g~---~~~~~l~~l~~--~~l~~~I~~Vit~~~~~~v~~~A~~~-----gIp~~~~~~~~~------~~ 66 (212)
T 3av3_A 3 MKRLAVFASGSGT---NFQAIVDAAKR--GDLPARVALLVCDRPGAKVIERAARE-----NVPAFVFSPKDY------PS 66 (212)
T ss_dssp CEEEEEECCSSCH---HHHHHHHHHHT--TCCCEEEEEEEESSTTCHHHHHHHHT-----TCCEEECCGGGS------SS
T ss_pred CcEEEEEEECCcH---HHHHHHHHHHh--CCCCCeEEEEEeCCCCcHHHHHHHHc-----CCCEEEeCcccc------cc
Confidence 6789888887744 35667788888 5 79997766542 1 1223333 666655442110 00
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
. ...+..+.+.++++ +||++|+-.+. .....+-..+.-.++-++++
T Consensus 67 -~-------~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 67 -K-------AAFESEILRELKGR-----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp -H-------HHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred -h-------hhhHHHHHHHHHhc-----CCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 0 11112233344443 59999988765 44444555565666766443
No 78
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=78.14 E-value=3 Score=35.97 Aligned_cols=49 Identities=22% Similarity=0.215 Sum_probs=38.5
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
...+++||++...++.+-+. ...|.+.|++ .| +|.++.++....++...
T Consensus 15 ~~l~~k~IllgvTGsiaa~k-~~~ll~~L~~--~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 15 TTPRKPRVLLAASGSVAAIK-FGNLCHCFTE--WA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp ----CCEEEEEECSSGGGGG-HHHHHHHHHT--TS-EEEEEECTGGGGTCCGG
T ss_pred cccCCCEEEEEEeCcHHHHH-HHHHHHHHhc--CC-CEEEEEcchHHHhcCHH
Confidence 33445789988888877655 8999999999 99 99999999888877665
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=77.21 E-value=2.9 Score=35.78 Aligned_cols=48 Identities=13% Similarity=-0.191 Sum_probs=38.7
Q ss_pred CCCcEEEEEcCCCccChH-HHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 10 GRMCHIVALPYPGRGHIN-PMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~-p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
.+++||++...++ +..+ -.+.+.+.|++ +|++|.++.++....++...
T Consensus 5 l~~k~I~lgiTGs-~aa~~k~~~ll~~L~~--~g~eV~vv~T~~A~~~i~~~ 53 (201)
T 3lqk_A 5 FAGKHVGFGLTGS-HCTYHEVLPQMERLVE--LGAKVTPFVTHTVQTTDTKF 53 (201)
T ss_dssp CTTCEEEEECCSC-GGGGGGTHHHHHHHHH--TTCEEEEECSSCSCCTTCCT
T ss_pred cCCCEEEEEEECh-HHHHHHHHHHHHHHhh--CCCEEEEEEChhHHHHHHHh
Confidence 3456888887777 5566 79999999999 99999999998877666544
No 80
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.18 E-value=20 Score=36.87 Aligned_cols=35 Identities=17% Similarity=0.061 Sum_probs=26.8
Q ss_pred HHhhhhcccceeecc---CCc-chHHHHHHcCCceeccccc
Q 012096 343 LEVLCHSSIGGFWTH---CGL-NSTLEAAYAGVPMLTFPIM 379 (471)
Q Consensus 343 ~~lL~~~~~~~~Ith---gG~-~s~~eal~~GvP~v~~P~~ 379 (471)
.++++.+++ ||.- =|+ .+.+||+++|+|+|+.-..
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 458899999 6643 344 4899999999999986543
No 81
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=77.11 E-value=3.1 Score=35.22 Aligned_cols=46 Identities=13% Similarity=0.117 Sum_probs=39.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
|+||++...++.| ..-...+.+.|++ +|++|.++.++....++..+
T Consensus 1 mk~IllgvTGs~a-a~k~~~l~~~L~~--~g~~V~vv~T~~A~~~i~~e 46 (189)
T 2ejb_A 1 MQKIALCITGASG-VIYGIKLLQVLEE--LDFSVDLVISRNAKVVLKEE 46 (189)
T ss_dssp CCEEEEEECSSTT-HHHHHHHHHHHHH--TTCEEEEEECHHHHHHHHHC
T ss_pred CCEEEEEEECHHH-HHHHHHHHHHHHH--CCCEEEEEEChhHHHHhhHH
Confidence 3589888888877 4468999999999 99999999999888888763
No 82
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=75.57 E-value=2.9 Score=36.07 Aligned_cols=46 Identities=13% Similarity=0.080 Sum_probs=38.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
++||++...++.|-+. ...|.+.|++ .|++|.++.++....++...
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~--~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQ--EEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHH--TTCEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHH--CCCEEEEEECccHHHHHHHH
Confidence 4688888888866655 8999999999 99999999999888887654
No 83
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=75.26 E-value=3.3 Score=33.05 Aligned_cols=47 Identities=11% Similarity=0.045 Sum_probs=35.3
Q ss_pred CcEEEEEcC-C-CccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 12 MCHIVALPY-P-GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~-~-~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
.||++++-+ | .+-.+.-.+=++..|++ +||+|++.+.+.....++-.
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~--~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKK--KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHh--cCCeeEEecCHHHHhheecc
Confidence 445655544 4 44566667888999999 99999999999888777543
No 84
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=74.04 E-value=5.7 Score=30.37 Aligned_cols=45 Identities=13% Similarity=0.090 Sum_probs=36.6
Q ss_pred ccccccCCCCcEEEEEcCCCccChHH-HHHHHHHHHhcCCCcEEEEEE
Q 012096 3 HSRMKATGRMCHIVALPYPGRGHINP-MMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 3 ~~~~~~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~~~rGh~Vt~~~ 49 (471)
|+..+...+|+||+++|..|.|.-.- .-.+-+.+.+ .|.++.+-.
T Consensus 12 ~~~~~~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~--~gi~~~V~~ 57 (113)
T 1tvm_A 12 HENLYFQGSKRKIIVACGGAVATSTMAAEEIKELCQS--HNIPVELIQ 57 (113)
T ss_dssp CCCCCCSCSSEEEEEESCSCSSHHHHHHHHHHHHHHH--TTCCEEEEE
T ss_pred hhhHhhcccccEEEEECCCCHHHHHHHHHHHHHHHHH--cCCeEEEEE
Confidence 56677888889999999999999875 6777788888 998865544
No 85
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=73.49 E-value=4.3 Score=38.55 Aligned_cols=37 Identities=19% Similarity=0.161 Sum_probs=31.4
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++|+++.. ++.|-..-...+|..|++ +|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~--~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLAS--QGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHH--TTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHH--CCCCeEEEeC
Confidence 567777766 567899999999999999 9999999987
No 86
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=72.41 E-value=3 Score=35.51 Aligned_cols=47 Identities=11% Similarity=-0.082 Sum_probs=37.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGS 59 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~ 59 (471)
.+++||++...++.|=. -...+.+.|++ +|++|.++.++....++..
T Consensus 6 l~~k~IllgvTGs~aa~-k~~~l~~~L~~--~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSV-GISSYLLYFKS--FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGG-GTHHHHHHHTT--TSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHH-HHHHHHHHHHH--CCCEEEEEEchhHHHHHHH
Confidence 34468888887776655 47899999999 9999999999887776644
No 87
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=72.19 E-value=6.1 Score=32.94 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=36.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGS 59 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~ 59 (471)
+||++...++.|=+ -...+.+.|++ +|++|.++.++....++..
T Consensus 6 k~IllgvTGs~aa~-k~~~ll~~L~~--~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSI-NISHYIIELKS--KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGG-GHHHHHHHHTT--TCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHH-HHHHHHHHHHH--CCCEEEEEECcCHHHHhhH
Confidence 47888777775544 58999999999 9999999999988777654
No 88
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=71.25 E-value=4 Score=34.78 Aligned_cols=45 Identities=16% Similarity=-0.007 Sum_probs=37.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCC-CcEEEEEECccchhhhcCC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNP-NVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh~Vt~~~~~~~~~~~~~~ 60 (471)
|||++...++.|-+ -...+.+.|++ . |++|.++.++....++...
T Consensus 1 ~~IllgvTGsiaa~-k~~~ll~~L~~--~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAP-LGVALLQALRE--MPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHH-HHHHHHHHHHT--CTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHH-HHHHHHHHHHh--ccCCEEEEEECchHHHHhHHH
Confidence 47888777776554 59999999999 8 9999999999888877643
No 89
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=70.32 E-value=12 Score=34.98 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=35.4
Q ss_pred CCCCcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 9 TGRMCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 9 ~~~~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.+.|++|+|+.. ++-|=..-..+||..|++ +|++|.++....
T Consensus 22 ~~~~~~i~v~sgKGGvGKTTvA~~LA~~lA~--~G~rVLlvD~D~ 64 (349)
T 3ug7_A 22 KKDGTKYIMFGGKGGVGKTTMSAATGVYLAE--KGLKVVIVSTDP 64 (349)
T ss_dssp SSCSCEEEEEECSSSTTHHHHHHHHHHHHHH--SSCCEEEEECCT
T ss_pred ccCCCEEEEEeCCCCccHHHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 455667777766 688999999999999999 999999999765
No 90
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=69.16 E-value=18 Score=34.83 Aligned_cols=37 Identities=11% Similarity=-0.010 Sum_probs=25.9
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+++.+||+|++.+... . .+.++.++ .|++|+++.+..
T Consensus 2 ~~~~k~l~Il~~~~~~--~---~i~~aa~~--lG~~vv~v~~~~ 38 (425)
T 3vot_A 2 TKRNKNLAIICQNKHL--P---FIFEEAER--LGLKVTFFYNSA 38 (425)
T ss_dssp CCCCCEEEEECCCTTC--C---HHHHHHHH--TTCEEEEEEETT
T ss_pred CCCCcEEEEECCChhH--H---HHHHHHHH--CCCEEEEEECCC
Confidence 4556788888765432 1 35688888 999999987643
No 91
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=68.43 E-value=46 Score=29.40 Aligned_cols=32 Identities=31% Similarity=0.282 Sum_probs=24.3
Q ss_pred CCceEEE-EcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 113 PVVSAII-VDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 113 ~~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
..||+|| +|... .-++.=|.++|||+|.++-+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 3699987 56555 55677799999999997554
No 92
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=67.01 E-value=5.2 Score=33.58 Aligned_cols=45 Identities=9% Similarity=0.022 Sum_probs=36.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
+||++...++.|=+ -...+.+.|++ +|++|.++.++....++...
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~--~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQ--HFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTT--TSSCEEEEECGGGGGTSCGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHH--CCCEEEEEEchhHHHHHHHH
Confidence 36777777775544 78999999999 99999999999888777654
No 93
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=65.29 E-value=8.2 Score=33.38 Aligned_cols=110 Identities=7% Similarity=-0.036 Sum_probs=57.3
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch---hhhcCCCCCCCCeEEEecCCCCCCchhh
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL---SFIGSGHGNHNNIRFETIPNVIPSELVR 82 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~ 82 (471)
+++...|+||+|+.+++.+-+. +|.+++.+ ..+++|..+.+.... +...+. ++.+..++..-. .
T Consensus 6 ~~~~~~~~ri~vl~SG~gsnl~---all~~~~~-~~~~eI~~Vis~~~a~~~~~A~~~-----gIp~~~~~~~~~---~- 72 (215)
T 3da8_A 6 RVPPSAPARLVVLASGTGSLLR---SLLDAAVG-DYPARVVAVGVDRECRAAEIAAEA-----SVPVFTVRLADH---P- 72 (215)
T ss_dssp EECCCSSEEEEEEESSCCHHHH---HHHHHSST-TCSEEEEEEEESSCCHHHHHHHHT-----TCCEEECCGGGS---S-
T ss_pred cCCCCCCcEEEEEEeCChHHHH---HHHHHHhc-cCCCeEEEEEeCCchHHHHHHHHc-----CCCEEEeCcccc---c-
Confidence 4556677899999888744333 34444433 146788777665432 234444 666665531100 0
Q ss_pred hhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 83 ARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
+ . ......+.+.++++ ++|++|+-.+. .-...+-..+.-.++-+++
T Consensus 73 --~-r-------~~~d~~~~~~l~~~-----~~Dlivlagy~~iL~~~~l~~~~~~~iNiHp 119 (215)
T 3da8_A 73 --S-R-------DAWDVAITAATAAH-----EPDLVVSAGFMRILGPQFLSRFYGRTLNTHP 119 (215)
T ss_dssp --S-H-------HHHHHHHHHHHHTT-----CCSEEEEEECCSCCCHHHHHHHTTTEEEEES
T ss_pred --c-h-------hhhhHHHHHHHHhh-----CCCEEEEcCchhhCCHHHHhhccCCeEEeCc
Confidence 0 0 01122234444443 69999987665 3333444445445566544
No 94
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=64.45 E-value=11 Score=29.77 Aligned_cols=44 Identities=7% Similarity=-0.022 Sum_probs=32.3
Q ss_pred CcEEEEEcCCC---ccChHHHHHHHHHHHhcCCCcEEEEEECccchhhh
Q 012096 12 MCHIVALPYPG---RGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFI 57 (471)
Q Consensus 12 ~~~il~~~~~~---~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~ 57 (471)
++|++|+...+ .......+.+|....+ .||+|+++-.......+
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a--~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISAS--MEYETSVFFMIXGPXLL 61 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHH--TTCEEEEEECTTGGGGG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHH--CCCCEEEEEEeCcHHHH
Confidence 45666555544 4577788889998888 89999998887655444
No 95
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=64.00 E-value=12 Score=28.36 Aligned_cols=47 Identities=15% Similarity=0.110 Sum_probs=34.3
Q ss_pred CcEEEEEcCC---CccChHHHHHHHHHHHhcCC-Cc-EEEEEECccchhhhcCC
Q 012096 12 MCHIVALPYP---GRGHINPMMNLCKLLVSRNP-NV-FITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~~---~~GH~~p~l~La~~L~~~~r-Gh-~Vt~~~~~~~~~~~~~~ 60 (471)
|+|++|+-.. +.......+.+|..+.+ . || +|+++-..+......+.
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~--~~g~~~v~vff~~dgV~~~~~~ 52 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALRE--QESNLDLRLFLMSDAVTAGLRG 52 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHH--HCTTCEEEEEECGGGGGGGBSC
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHh--cCCCccEEEEEEchHHHHHhcC
Confidence 3455555443 33456778999999999 8 99 99999988877666554
No 96
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=63.63 E-value=7.7 Score=31.29 Aligned_cols=42 Identities=19% Similarity=0.130 Sum_probs=27.9
Q ss_pred cccccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 4 SRMKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 4 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
--|+-....++|+|+..+..| ..+++.|.+ .|++|+++....
T Consensus 11 ~~~~~~~~~~~v~IiG~G~iG-----~~la~~L~~--~g~~V~vid~~~ 52 (155)
T 2g1u_A 11 HHMSKKQKSKYIVIFGCGRLG-----SLIANLASS--SGHSVVVVDKNE 52 (155)
T ss_dssp ------CCCCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEEESCG
T ss_pred hhhhcccCCCcEEEECCCHHH-----HHHHHHHHh--CCCeEEEEECCH
Confidence 346666667899999654434 568999999 999999987643
No 97
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=62.39 E-value=24 Score=32.68 Aligned_cols=31 Identities=13% Similarity=-0.097 Sum_probs=22.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|||+|+. --+....+.++|.+ .||+|..+.+
T Consensus 23 mrIvf~G-----~~~fa~~~L~~L~~--~~~~i~~Vvt 53 (329)
T 2bw0_A 23 MKIAVIG-----QSLFGQEVYCHLRK--EGHEVVGVFT 53 (329)
T ss_dssp CEEEEEC-----CHHHHHHHHHHHHH--TTCEEEEEEE
T ss_pred CEEEEEc-----CcHHHHHHHHHHHH--CCCeEEEEEe
Confidence 7999983 22444456799999 8999876665
No 98
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=62.25 E-value=14 Score=31.91 Aligned_cols=109 Identities=6% Similarity=-0.045 Sum_probs=60.8
Q ss_pred CcEEEEEcCCCccChHH----HHHHHHHHHhcCCCcEEEEEECccc----hhhhcCCCCCCCCeEEEecCCC-CCCchhh
Q 012096 12 MCHIVALPYPGRGHINP----MMNLCKLLVSRNPNVFITFVVTEEW----LSFIGSGHGNHNNIRFETIPNV-IPSELVR 82 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p----~l~La~~L~~~~rGh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~ip~~-~~~~~~~ 82 (471)
|..|+++.--..|.+.| ++.-|+.|++. .|-+|+.++-... .+.....|+. +.+-+.+. +. .
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~-~g~~v~av~~G~~~~~~~~~~~~~Gad----~v~~v~~~~~~-~--- 73 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANE-LNCQLEAVVAGTGLKEIEKQILPYGVD----KLHVFDAEGLY-P--- 73 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHH-HTCCEEEEEEESCCTTTHHHHGGGTCS----EEEEEECGGGS-S---
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHh-cCCeEEEEEECCCHHHHHHHHHhcCCC----EEEEecCcccc-c---
Confidence 45688888766677666 57778889872 3767776654322 1222233331 22222211 10 0
Q ss_pred hhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch---hhHHHHHhhcCCCeEEEec
Q 012096 83 ARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL---AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~---~~~~~~A~~lgIP~v~~~~ 143 (471)
.+. ......+.+++++. +||+|++.... ..+..+|.++++|.+.-++
T Consensus 74 -~~~--------~~~a~~l~~~i~~~-----~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~ 123 (217)
T 3ih5_A 74 -YTS--------LPHTSILVNLFKEE-----QPQICLMGATVIGRDLGPRVSSALTSGLTADCT 123 (217)
T ss_dssp -CCH--------HHHHHHHHHHHHHH-----CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCS
T ss_pred -CCH--------HHHHHHHHHHHHhc-----CCCEEEEeCCcchhhHHHHHHHHhCCCccceEE
Confidence 011 11122244455554 59999987655 4566799999999998543
No 99
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=61.12 E-value=13 Score=29.46 Aligned_cols=37 Identities=11% Similarity=-0.128 Sum_probs=33.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+|++.+.++..|-....=++..|.. .|++|......
T Consensus 4 ~~vvla~~~~d~HdiG~~~v~~~l~~--~G~~Vi~lG~~ 40 (137)
T 1ccw_A 4 KTIVLGVIGSDCHAVGNKILDHAFTN--AGFNVVNIGVL 40 (137)
T ss_dssp CEEEEEEETTCCCCHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CEEEEEeCCCchhHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 57999999999999999999999999 99999988764
No 100
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=61.06 E-value=31 Score=31.64 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|||+|+..+.. .....++|.+ .||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~--~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLS--SGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHH--TTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHH--CCCcEEEEEeC
Confidence 3589999887642 3556688888 89999866654
No 101
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=60.09 E-value=30 Score=28.26 Aligned_cols=41 Identities=12% Similarity=0.079 Sum_probs=23.7
Q ss_pred CCCcEEEEEc-CCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 10 GRMCHIVALP-YPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 10 ~~~~~il~~~-~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+.||||=+.. +.+.....-.-.+.++|++ +.+.+.++.|-.
T Consensus 2 ~~M~kIYLAGP~Fs~~q~~~~~~l~~~L~~--~~~g~~v~~P~~ 43 (162)
T 3ehd_A 2 NAMTKIYFAGPLFSQADLRYNAYLVEQIRQ--LDKTIDLYLPQE 43 (162)
T ss_dssp --CEEEEEESCCSSHHHHHHHHHHHHHHHT--TCTTEEEECGGG
T ss_pred CCccEEEEECCCCCHHHHHHHHHHHHHHHh--cCCCCEEECCCc
Confidence 4577764433 3344566667778999998 533355666643
No 102
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=59.12 E-value=57 Score=29.96 Aligned_cols=34 Identities=24% Similarity=0.085 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|||+|+..+. ..+...++|.+ +||+|..+.+.
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~--~~~~v~~Vvt~ 39 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLS--SEHEIIAVYTQ 39 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHT--SSSEEEEEECC
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHH--CCCcEEEEEcC
Confidence 368999997764 34456788889 89999877664
No 103
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=58.87 E-value=9.1 Score=32.83 Aligned_cols=44 Identities=14% Similarity=-0.137 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCCccChHH-HHHHHHHHHhcCCCcEEEEEECccchhhh
Q 012096 11 RMCHIVALPYPGRGHINP-MMNLCKLLVSRNPNVFITFVVTEEWLSFI 57 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p-~l~La~~L~~~~rGh~Vt~~~~~~~~~~~ 57 (471)
+++||++...++ +..+- ...+.+.|++ +|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~--~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIA--EGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHH--TTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHh--CCCEEEEEEehHHHHHH
Confidence 346788777776 55665 8999999999 99999999998766443
No 104
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=57.46 E-value=1e+02 Score=27.28 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=29.9
Q ss_pred CcEEEEEcC--CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPY--PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~--~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.++++.++. ++.|=..-...||..|++ .|.+|.++-..
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~--~G~rVLLID~D 120 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQ--AGYKTLIVDGD 120 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHh--CCCeEEEEeCC
Confidence 345544443 678999999999999999 99999998654
No 105
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=56.38 E-value=19 Score=31.73 Aligned_cols=38 Identities=5% Similarity=0.018 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCc----------c-ChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGR----------G-HINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~----------G-H~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+||+|+..... | ...=++.-...|++ .|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~--aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA--AGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 778988877631 3 24457777899999 99999999975
No 106
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=56.23 E-value=51 Score=28.95 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccCh-HHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHI-NPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~-~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+++-.-+.-++ ..+...++.+.. .|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~--p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA--PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC--TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC--CCCEEEEEeCC
Confidence 46766655554444 566778888887 89999988864
No 107
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=56.19 E-value=18 Score=31.37 Aligned_cols=154 Identities=12% Similarity=0.039 Sum_probs=76.2
Q ss_pred ccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCcccccc-CCCceEeeccchHHhhhhccccee
Q 012096 276 WLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGC-VDRGIVVPWCDQLEVLCHSSIGGF 354 (471)
Q Consensus 276 ~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~-~~nv~v~~~~pq~~lL~~~~~~~~ 354 (471)
|++-. .+.++.|..|.+. ...+..|.+.+..+.++-....+.+.... ..++.+....-+...|..+++ +
T Consensus 26 fl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL--V 95 (223)
T 3dfz_A 26 MLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFF--I 95 (223)
T ss_dssp EECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSE--E
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCE--E
Confidence 55444 3448888876444 34556667778888776543222221111 123444322222334666666 8
Q ss_pred eccCCcchHHHHHHcCCceecccc-cccccchhhh-----hhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCch
Q 012096 355 WTHCGLNSTLEAAYAGVPMLTFPI-MMDQVPNSKL-----IVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNND 428 (471)
Q Consensus 355 IthgG~~s~~eal~~GvP~v~~P~-~~DQ~~na~~-----v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~ 428 (471)
|.--|--.+.+.++.-.- ..+|+ ..|.+..+.. +.+. ++-+.+.. .. ..-.-+..|++.|.+.+..
T Consensus 96 IaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST-~G--~sP~la~~iR~~ie~~lp~--- 167 (223)
T 3dfz_A 96 VVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAIST-DG--ASPLLTKRIKEDLSSNYDE--- 167 (223)
T ss_dssp EECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEEC-TT--SCHHHHHHHHHHHHHHSCT---
T ss_pred EECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEEC-CC--CCcHHHHHHHHHHHHHccH---
Confidence 888887666665554222 33443 2455544432 2222 34444443 11 0112344566777666643
Q ss_pred hHHHHHHHHHHHHHHHHHh
Q 012096 429 ERKAMSKRAREVQEICQEA 447 (471)
Q Consensus 429 ~~~~~~~~a~~l~~~~~~~ 447 (471)
....+-+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 168 SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 2246677777777777653
No 108
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=55.84 E-value=96 Score=26.44 Aligned_cols=104 Identities=9% Similarity=0.057 Sum_probs=57.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc-c---hhhhcCCCCCCCCeEEEecCC-CCCCchhhhhcHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE-W---LSFIGSGHGNHNNIRFETIPN-VIPSELVRARDFL 87 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~ip~-~~~~~~~~~~~~~ 87 (471)
+||+++.++..+ -+-+|.+++.+..-+|+|..+.+.. . .+...+. ++.+..++. .+. + .
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~-----gIp~~~~~~~~~~-------~-r 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA-----GIATHTLIASAFD-------S-R 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT-----TCEEEECCGGGCS-------S-H
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc-----CCcEEEeCccccc-------c-h
Confidence 478888777643 3667777777721268887666542 1 2233444 777766542 111 0 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 88 AFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
....+.+.+.++++ +||+||+-.+. .....+-..+.-.++-++++
T Consensus 65 -------~~~~~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 65 -------EAYDRELIHEIDMY-----APDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp -------HHHHHHHHHHHGGG-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------hhccHHHHHHHHhc-----CCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 11112233344443 69999988775 43444555666667776443
No 109
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=55.61 E-value=40 Score=31.88 Aligned_cols=34 Identities=9% Similarity=-0.057 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+++||+|+..+.. .+.+++++++ .|++|.++..+
T Consensus 6 ~~~~ilI~g~g~~-----~~~~~~a~~~--~G~~~v~v~~~ 39 (403)
T 4dim_A 6 DNKRLLILGAGRG-----QLGLYKAAKE--LGIHTIAGTMP 39 (403)
T ss_dssp CCCEEEEECCCGG-----GHHHHHHHHH--HTCEEEEEECS
T ss_pred CCCEEEEECCcHh-----HHHHHHHHHH--CCCEEEEEcCC
Confidence 4678999987764 3679999999 99999999754
No 110
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=55.56 E-value=11 Score=30.17 Aligned_cols=44 Identities=11% Similarity=-0.029 Sum_probs=33.8
Q ss_pred EEEEEc-CCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcC
Q 012096 14 HIVALP-YPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGS 59 (471)
Q Consensus 14 ~il~~~-~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~ 59 (471)
|++|+. .+..-.+.+.+.+|...++ .|++|+++.+......+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa--~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAA--SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHH--cCCcEEEEEehHHHHHHhc
Confidence 454444 4556788899999999999 8999999999876655544
No 111
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=55.56 E-value=20 Score=33.55 Aligned_cols=39 Identities=15% Similarity=0.172 Sum_probs=32.5
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHH--hcCCCcEEEEEECcc
Q 012096 12 MCHIVALPY-PGRGHINPMMNLCKLLV--SRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~-~~~GH~~p~l~La~~L~--~~~rGh~Vt~~~~~~ 52 (471)
.++|+|+.. ++.|=..-..+||..|+ + +|++|.++....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~--~g~~vllid~D~ 58 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQ--PNEQFLLISTDP 58 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHC--TTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhc--CCCeEEEEECCC
Confidence 346666655 78899999999999999 8 999999999864
No 112
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.08 E-value=51 Score=27.74 Aligned_cols=47 Identities=11% Similarity=0.105 Sum_probs=35.7
Q ss_pred HHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEecchHHHHH
Q 012096 99 APFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWSMSASLFS 150 (471)
Q Consensus 99 ~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 150 (471)
..+++.+++++++ ++|+||.+.. ...+|+++|+|.+.+.++..+-..
T Consensus 129 ~e~~~~i~~l~~~--G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~ 175 (196)
T 2q5c_A 129 DEITTLISKVKTE--NIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRR 175 (196)
T ss_dssp GGHHHHHHHHHHT--TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHH
T ss_pred HHHHHHHHHHHHC--CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHH
Confidence 4567778888775 7999999843 467899999999998876655433
No 113
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=54.81 E-value=6.3 Score=36.09 Aligned_cols=39 Identities=15% Similarity=0.080 Sum_probs=26.9
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+.+.++|||+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~--~G~~V~~~dr~ 39 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLR--AGLSTWGADLN 39 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHH--CCCeEEEEECC
Confidence 4444556899999776655 478999999 99999998643
No 114
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=54.66 E-value=12 Score=32.49 Aligned_cols=43 Identities=9% Similarity=0.133 Sum_probs=24.9
Q ss_pred cccCCCCcEEEEEcC-CCc----cChHHHH--HHHHHHHhcCCCcEEEEEEC
Q 012096 6 MKATGRMCHIVALPY-PGR----GHINPMM--NLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 6 ~~~~~~~~~il~~~~-~~~----GH~~p~l--~La~~L~~~~rGh~Vt~~~~ 50 (471)
|.+.++||||+++.. |-. +-++-.+ .+++.|.+ .||+|.++-.
T Consensus 19 ~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~--~g~ev~~~dL 68 (218)
T 3rpe_A 19 YFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRE--SGHQVKITTV 68 (218)
T ss_dssp C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHH--TTCCEEEEEG
T ss_pred ccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhh--CCCEEEEEEC
Confidence 677888998877764 432 2344322 35566777 8999988665
No 115
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=53.86 E-value=30 Score=33.35 Aligned_cols=25 Identities=16% Similarity=0.115 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNV 43 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh 43 (471)
||||+++..+++- .+||+.|++ .+.
T Consensus 3 ~mkvlviG~ggre-----~ala~~l~~--s~~ 27 (431)
T 3mjf_A 3 AMNILIIGNGGRE-----HALGWKAAQ--SPL 27 (431)
T ss_dssp CEEEEEEECSHHH-----HHHHHHHTT--CTT
T ss_pred CcEEEEECCCHHH-----HHHHHHHHh--CCC
Confidence 7899999888654 478999998 654
No 116
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.81 E-value=13 Score=30.30 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+..+|++.+.++..|-....-++..|.. .|++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~--~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD--AGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH--TTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 4578999999999999999999999999 99999998754
No 117
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=52.84 E-value=63 Score=27.89 Aligned_cols=38 Identities=13% Similarity=0.017 Sum_probs=31.6
Q ss_pred cEEEEEcCC-CccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYP-GRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~-~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
-.+.+++++ +.|=..-++.++..+.. +|..|.++.+..
T Consensus 12 G~i~litG~mGsGKTT~ll~~~~r~~~--~g~kVli~~~~~ 50 (223)
T 2b8t_A 12 GWIEFITGPMFAGKTAELIRRLHRLEY--ADVKYLVFKPKI 50 (223)
T ss_dssp CEEEEEECSTTSCHHHHHHHHHHHHHH--TTCCEEEEEECC
T ss_pred cEEEEEECCCCCcHHHHHHHHHHHHHh--cCCEEEEEEecc
Confidence 346666665 99999999999999999 999999987654
No 118
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=52.07 E-value=64 Score=27.66 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=56.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc-c---hhhhcCCCCCCCCeEEEecCCCCCCchhhhhcH
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE-W---LSFIGSGHGNHNNIRFETIPNVIPSELVRARDF 86 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~-~---~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 86 (471)
+++||+++.+++. |. +.+|.+++.+..-+++|..+.+.. . .+...+. ++.+..++..-. .+
T Consensus 7 ~~~ri~vl~SG~g-sn--l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~-----gIp~~~~~~~~~------~~- 71 (215)
T 3kcq_A 7 KELRVGVLISGRG-SN--LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY-----GIPTFVVKRKPL------DI- 71 (215)
T ss_dssp CCEEEEEEESSCC-HH--HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCBTTB------CH-
T ss_pred CCCEEEEEEECCc-HH--HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCcccC------Ch-
Confidence 4678988887763 33 455666666611137888777632 1 1234444 677766642110 00
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 87 LAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
+.+.+.++++ +||+||+-.+. .-...+-..+.-.++-++++
T Consensus 72 ------------~~~~~~L~~~-----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 72 ------------EHISTVLREH-----DVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp ------------HHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------------HHHHHHHHHh-----CCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 2334445554 59999988775 44444555555566666443
No 119
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=51.90 E-value=27 Score=26.17 Aligned_cols=38 Identities=11% Similarity=-0.032 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+|+||+++|..|.|--.-.-.+=+.+.+ +|.++.+...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~--~gi~~~i~a~ 39 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEK--YEVPVIIEAF 39 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHH--SCCSEEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHH--CCCCeEEEEe
Confidence 4679999999887666555677788888 8988766554
No 120
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=51.61 E-value=14 Score=34.24 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=28.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+.|+||.|+..++.| +-++|+.|.+ +||+|+..=.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~--~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKE--AGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHH--TTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHh--CCCEEEEEcC
Confidence 457899999999877 4469999999 9999998654
No 121
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=51.31 E-value=83 Score=28.42 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=28.7
Q ss_pred EEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|+|... ++.|=..-...||..|++ .|.+|.++-..
T Consensus 106 vI~vts~kgG~GKTtva~nLA~~lA~--~G~rVLLID~D 142 (299)
T 3cio_A 106 ILMITGATPDSGKTFVSSTLAAVIAQ--SDQKVLFIDAD 142 (299)
T ss_dssp EEEEEESSSSSCHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred EEEEECCCCCCChHHHHHHHHHHHHh--CCCcEEEEECC
Confidence 3444433 678999999999999999 99999998654
No 122
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=50.76 E-value=19 Score=30.81 Aligned_cols=49 Identities=18% Similarity=0.142 Sum_probs=37.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
.+++||++...++.+ .+-...+.+.|++. +|++|.++.++....++...
T Consensus 17 l~~k~IllgvTGsia-a~k~~~lv~~L~~~-~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVA-ALKLPLLVSKLLDI-PGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp CSSEEEEEEECSSGG-GGTHHHHHHHHC----CEEEEEEECTGGGGSSCGG
T ss_pred cCCCEEEEEEeChHH-HHHHHHHHHHHhcc-cCCEEEEEECHhHHHHhCHH
Confidence 445688888888766 45568999999762 49999999999888887665
No 123
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=49.77 E-value=1.3e+02 Score=27.97 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=33.8
Q ss_pred CcEEEEEcCC-CccChHHHHHHHHHHHhcCCCcEEEEEECccchhhh
Q 012096 12 MCHIVALPYP-GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFI 57 (471)
Q Consensus 12 ~~~il~~~~~-~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~ 57 (471)
..+|+++... +-|-....+.|.++|++ +|+++.|+.+.+....+
T Consensus 152 ~k~i~v~GTD~~VGK~~ts~~L~~~l~~--~G~~a~~~~tgqtg~~~ 196 (349)
T 2obn_A 152 CRRVLTVGTDMAIGKMSTSLELHWAAKL--RGWRSKFLATGQTGVML 196 (349)
T ss_dssp SEEEEEEESSSSSSHHHHHHHHHHHHHH--TTCCEEEECCSHHHHHH
T ss_pred ceEEEEcCCCccccceeHHHHHHHHHHh--cCCcEEEEeccchhhhh
Confidence 3455555543 56999999999999999 99999998877654444
No 124
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=49.49 E-value=22 Score=30.34 Aligned_cols=40 Identities=15% Similarity=-0.042 Sum_probs=35.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+..+|++.+.++..|-....-++..|.. +|++|.++....
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~--~G~~v~~LG~~v 126 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLES--GGFTVYNLGVDI 126 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHH--TTCEEEECCSSB
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHH--CCCEEEECCCCC
Confidence 3458999999999999999999999999 999999988653
No 125
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=49.42 E-value=1.1e+02 Score=27.33 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=29.1
Q ss_pred cEEEEEcC--CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPY--PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~--~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|++.++. ++.|=..-...||..|++ .|.+|.++-..
T Consensus 92 ~kvI~vts~kgG~GKTtva~nLA~~lA~--~G~rVLLID~D 130 (286)
T 3la6_A 92 NNVLMMTGVSPSIGMTFVCANLAAVISQ--TNKRVLLIDCD 130 (286)
T ss_dssp CCEEEEEESSSSSSHHHHHHHHHHHHHT--TTCCEEEEECC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHh--CCCCEEEEecc
Confidence 34444433 577899999999999999 99999998654
No 126
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=49.28 E-value=65 Score=28.29 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=27.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|++ .|.+|.+..-.
T Consensus 3 K~vlVTGas~G---IG~aia~~la~--~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLE--AGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 67888888876 56789999999 99999887654
No 127
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=49.21 E-value=9.1 Score=35.58 Aligned_cols=42 Identities=14% Similarity=0.068 Sum_probs=32.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
+|||+|+..++.| ..+|..|.+ .||+|+++......+.+.+.
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~--~g~~V~~~~r~~~~~~~~~~ 44 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLAL--AGEAINVLARGATLQALQTA 44 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHH--TTCCEEEECCHHHHHHHHHT
T ss_pred CCEEEEECcCHHH-----HHHHHHHHH--CCCEEEEEEChHHHHHHHHC
Confidence 5799999887766 567899999 99999999875444555544
No 128
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=49.20 E-value=76 Score=27.20 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=57.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccc----hhhhcCCCCCCCCeEEEecCCCCCCchhhhhcH
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEW----LSFIGSGHGNHNNIRFETIPNVIPSELVRARDF 86 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~----~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 86 (471)
+++||+++.++..+-+ .+|.++..+- .+++|..+.+... .+..++. ++.+..++..-..+.
T Consensus 4 ~~~riavl~SG~Gsnl---~all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~-----gIp~~~~~~~~~~~r------ 68 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNL---QAIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQA-----DIPTHIIPHEEFPSR------ 68 (215)
T ss_dssp CCEEEEEEESSCCHHH---HHHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHT-----TCCEEECCGGGSSSH------
T ss_pred CCcEEEEEEeCCcHHH---HHHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCccccCch------
Confidence 4678988887764433 4455555552 3688887776321 2234444 677766652110000
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 87 LAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
...+..+.+.++++ ++|+||+-.+. .-...+-..+.-.++-++++
T Consensus 69 --------~~~d~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 69 --------TDFESTLQKTIDHY-----DPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp --------HHHHHHHHHHHHTT-----CCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------hHhHHHHHHHHHhc-----CCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 00112233444444 69999988765 43444555555566666443
No 129
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=49.16 E-value=31 Score=33.75 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=52.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecC--CCCCC---chhhhhcHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIP--NVIPS---ELVRARDFL 87 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip--~~~~~---~~~~~~~~~ 87 (471)
+|-+|++. ++=.-++.+|+.|.+ .|+++. ++......+... |+....+. .++|+ +...+.++.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~--lGfeI~--ATgGTak~L~e~-----GI~v~~V~~vTgfPEil~GRVKTLHP~ 77 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSA--AGVEII--STGSTAKTIADT-----GIPVTPVEQLTGFPEVLDGRVKTLHPR 77 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHH--TTCEEE--ECHHHHHHHHTT-----TCCCEEHHHHHSCCCCTTTTSSSCSHH
T ss_pred ccEEEEEE---eccccHHHHHHHHHH--CCCEEE--EcchHHHHHHHc-----CCceeeccccCCCchhhCCccccCCch
Confidence 44344444 455668999999999 998875 677777788877 55555443 23333 222333333
Q ss_pred HHHHHHH-HhchHHHHHHHHHhhhcCCCceEEEEcC
Q 012096 88 AFVESVS-TKMEAPFEKVLDFLQVEAPVVSAIIVDT 122 (471)
Q Consensus 88 ~~~~~~~-~~~~~~~~~ll~~l~~~~~~~D~vI~D~ 122 (471)
-.-.... +..+...++ +++..- .++|+||++-
T Consensus 78 ihgGiLa~r~~~~h~~~-l~~~~i--~~iDlVvvNL 110 (523)
T 3zzm_A 78 VHAGLLADLRKSEHAAA-LEQLGI--EAFELVVVNL 110 (523)
T ss_dssp HHHHHHCCTTSHHHHHH-HHHHTC--CCCSEEEEEC
T ss_pred hhhhhccCCCCHHHHHH-HHHCCC--CceeEEEEeC
Confidence 2222221 122333333 223222 3789999984
No 130
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=48.84 E-value=21 Score=32.16 Aligned_cols=32 Identities=22% Similarity=0.171 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|||+|.... |.+ -..|++.|.+ +||+|+.++-
T Consensus 1 MkILVTGat--GfI--G~~L~~~L~~--~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGT--GFI--GTALTQLLNA--RGHEVTLVSR 32 (298)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHH--TTCEEEEEES
T ss_pred CEEEEECCC--CHH--HHHHHHHHHH--CCCEEEEEEC
Confidence 687766443 433 3568899999 9999999874
No 131
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=48.54 E-value=7.3 Score=35.69 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCC-----C-cEEEEEECccchhhhcC
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNP-----N-VFITFVVTEEWLSFIGS 59 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~r-----G-h~Vt~~~~~~~~~~~~~ 59 (471)
.+|||+|+..+..|. .+|..|.+ . | |+|+++..+...+.+.+
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~--~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLAL--RAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHH--HHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHh--CccccCCCCCEEEEEcHHHHHHHHh
Confidence 457999998877773 56788888 7 9 99999976433344443
No 132
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=48.49 E-value=43 Score=34.78 Aligned_cols=117 Identities=12% Similarity=0.075 Sum_probs=79.2
Q ss_pred eeccchHHhhhhcccceeeccCCcchHHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCC-CCCCccCHHHH
Q 012096 337 VPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEI-GSESLVTRDEI 415 (471)
Q Consensus 337 ~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~-~~~~~~~~~~l 415 (471)
.++.+-.++|..+++ +||=- ...+.|.+..++|+|....-.|+..+- --|...+..+. -..-.-+.++|
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-------~rg~y~d~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-------LRGFYMNYMEDLPGPIYTEPYGL 673 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-------CCSBSSCTTSSSSSCEESSHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-------cCCcccChhHhCCCCeECCHHHH
Confidence 356677889999998 99973 467899999999999886655554321 02223222000 00012388899
Q ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCCCcHHHHHHHHHHHHhh
Q 012096 416 TELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENGSSITNFDAFLNDISLA 468 (471)
Q Consensus 416 ~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 468 (471)
.++|.+...+. ..|+++.+++.+++-.. +.|.++.+.++.+++.....
T Consensus 674 ~~~i~~~~~~~----~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~~~ 721 (729)
T 3l7i_A 674 AKELKNLDKVQ----QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIKEQ 721 (729)
T ss_dssp HHHHTTHHHHH----HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhccc----hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCcCc
Confidence 99998876531 57888888888887643 56888888888888877654
No 133
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.31 E-value=26 Score=30.46 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=35.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+.+++|++..-|+.|=..-++.+|..|++ +|++|.++...
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~--~G~~V~v~d~D 43 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLR--QGVRVMAGVVE 43 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHH--CCCCEEEEEeC
Confidence 44678999999999999999999999999 99999887764
No 134
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=48.10 E-value=27 Score=31.05 Aligned_cols=40 Identities=13% Similarity=-0.056 Sum_probs=35.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+..+|++.+.++..|-....-++..|.. +|++|.++...
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~--~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRA--NGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 34568999999999999999999999999 99999988854
No 135
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.88 E-value=9.5 Score=30.01 Aligned_cols=34 Identities=9% Similarity=0.014 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|+||+++.. |. --..+++.|.+ +||+|+++...
T Consensus 5 ~~~~v~I~G~---G~--iG~~la~~L~~--~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EA--AGVGLVRELTA--AGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SH--HHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCCEEEEECC---CH--HHHHHHHHHHH--CCCeEEEEECC
Confidence 3568888865 33 35678999999 99999998764
No 136
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=47.88 E-value=1.2e+02 Score=25.39 Aligned_cols=96 Identities=16% Similarity=0.015 Sum_probs=52.3
Q ss_pred chhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEe--eccc-hHHhh-
Q 012096 271 DNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVV--PWCD-QLEVL- 346 (471)
Q Consensus 271 ~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~--~~~p-q~~lL- 346 (471)
.++-++|.... ..+||.|... ......++....+-++|-+++...+ . +. .....+. ...+ ...++
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~~-~-~~-~~~~~~~~~~~f~~Rk~~m~ 116 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEEA-G-NP-YLSVAVKTGLDFQMRSFVLL 116 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTCC-C-CT-TCSEEEECCCCHHHHHHHHH
T ss_pred HHHHHHHHHCC---CEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCccc-C-CC-CcceeeecCCCHHHHHHHHH
Confidence 34555666543 5556644332 3444555555556666666654321 1 11 1223333 2345 34444
Q ss_pred hhcccceeeccCCcchHHH---HHHcCCceecccc
Q 012096 347 CHSSIGGFWTHCGLNSTLE---AAYAGVPMLTFPI 378 (471)
Q Consensus 347 ~~~~~~~~IthgG~~s~~e---al~~GvP~v~~P~ 378 (471)
..++ ..++--||.||..| ++.+++|+++++.
T Consensus 117 ~~sd-a~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 117 RNAD-VVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp TTCS-EEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HhCC-EEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 4444 34566799998766 4779999999963
No 137
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=46.99 E-value=20 Score=33.01 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=28.9
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
..++|||+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 28 ~~~~~~I~iIG~G~mG-----~~~a~~l~~--~G~~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMG-----LPMARRLCE--AGYALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred ccCCCEEEEECccHHH-----HHHHHHHHh--CCCeEEEEcCC
Confidence 3456899999887777 678899999 99999988653
No 138
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=46.11 E-value=1e+02 Score=29.93 Aligned_cols=87 Identities=14% Similarity=0.107 Sum_probs=53.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVE 91 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~ 91 (471)
.+|++++.. -.-.+++++.|.+ -|.+|..+......+...+. .. ......|+.
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~e--lGm~vv~~~~~~~~~~~~~~-----~~-----------~~v~~~D~~---- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRS--MGAHTVAAVVPARAAALVDS-----PL-----------PSVRVGDLE---- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHT--TTCEEEEEEESSCCSCCTTT-----TS-----------SCEEESHHH----
T ss_pred CCEEEEECC-----cHHHHHHHHHHHH--CCCEEEEEEECCCChhhhhC-----cc-----------CcEEeCCHH----
Confidence 467887543 2455788899988 99999988875422211111 00 000001111
Q ss_pred HHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEE
Q 012096 92 SVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASF 141 (471)
Q Consensus 92 ~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~ 141 (471)
.+++++++. +||++|.+.. ...+|+++|||++.+
T Consensus 366 --------~le~~i~~~-----~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 --------DLEHAARAG-----QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp --------HHHHHHHHH-----TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred --------HHHHHHHhc-----CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 144555554 5999999854 456899999999974
No 139
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=46.09 E-value=18 Score=32.72 Aligned_cols=38 Identities=5% Similarity=-0.049 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCccC---hHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGH---INPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH---~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
||||+|+..+.... ......+++++++ +||+|.++.+.
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~--~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQR--RGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHH--TTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHH--CCCEEEEEchh
Confidence 46899999874321 2345779999999 99999998765
No 140
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.82 E-value=1.3e+02 Score=25.58 Aligned_cols=105 Identities=12% Similarity=0.039 Sum_probs=56.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc--c--hhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE--W--LSFIGSGHGNHNNIRFETIPNVIPSELVRARDFL 87 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~--~--~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 87 (471)
++||+++.++..+- +.+|.+++.+..-.++|..+.+.. . .+..++. ++.+..++..-..+ .
T Consensus 7 ~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~-----gIp~~~~~~~~~~~-------r 71 (209)
T 4ds3_A 7 RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA-----GIATQVFKRKDFAS-------K 71 (209)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCGGGSSS-------H
T ss_pred CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc-----CCCEEEeCccccCC-------H
Confidence 46898888776433 456666776611237888777632 1 1234444 66766655211000 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 88 AFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
...+..+.+.++++ +||+||+-.+. .....+-..+.-.++-+++
T Consensus 72 -------~~~d~~~~~~l~~~-----~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 72 -------EAHEDAILAALDVL-----KPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp -------HHHHHHHHHHHHHH-----CCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred -------HHHHHHHHHHHHhc-----CCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 11112344455554 59999988765 3344444555555666544
No 141
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=45.54 E-value=19 Score=32.99 Aligned_cols=46 Identities=13% Similarity=0.194 Sum_probs=34.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEe
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFET 71 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (471)
|||+|+..++.| ..+|..|.+ .||+|+++.... .+.+.+. ++....
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~--~g~~V~~~~r~~-~~~i~~~-----g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQR--SGEDVHFLLRRD-YEAIAGN-----GLKVFS 48 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHH--TSCCEEEECSTT-HHHHHHT-----CEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHH--CCCeEEEEEcCc-HHHHHhC-----CCEEEc
Confidence 689999888887 456889999 999999998766 4555554 555543
No 142
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=45.31 E-value=9.8 Score=34.85 Aligned_cols=38 Identities=5% Similarity=0.078 Sum_probs=29.3
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+...++++|+|+..+..| ..+|+.|.+ .||+|+++..
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~--~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLK--QGKRVAIWNR 40 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHH--TTCCEEEECS
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHH--CCCEEEEEeC
Confidence 4455567899999776555 478999999 9999998754
No 143
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=45.10 E-value=74 Score=30.74 Aligned_cols=40 Identities=13% Similarity=0.336 Sum_probs=34.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEW 53 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~ 53 (471)
...|+++..++.|=..-...||..|++ +|++|.++....+
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~--~G~kVllv~~D~~ 139 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQK--RGYKVGVVCSDTW 139 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHT--TTCCEEEEECCCS
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHH--CCCeEEEEeCCCc
Confidence 445777777899999999999999999 9999999987654
No 144
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=44.26 E-value=39 Score=31.54 Aligned_cols=85 Identities=18% Similarity=0.191 Sum_probs=47.4
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccc-cCC---CceE-----------eecc--c------
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDG-CVD---RGIV-----------VPWC--D------ 341 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~-~~~---nv~v-----------~~~~--p------ 341 (471)
+|+.+.||.+... -...++++|.+.+++|+|....+. .+.+ .+. .+.. .+++ +
T Consensus 5 i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~~g--~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
T 3s2u_A 5 VLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTPRG--IENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKS 80 (365)
T ss_dssp EEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECSSS--THHHHTGGGTCCEEECC--------------CHHHHHHH
T ss_pred EEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECCch--HhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHH
Confidence 6666666654321 134578889999999999865432 1000 010 0000 0110 1
Q ss_pred --h-HHhhh--hcccceeeccCCcchH---HHHHHcCCceec
Q 012096 342 --Q-LEVLC--HSSIGGFWTHCGLNST---LEAAYAGVPMLT 375 (471)
Q Consensus 342 --q-~~lL~--~~~~~~~IthgG~~s~---~eal~~GvP~v~ 375 (471)
+ ..++. +|++ +|++||+-+. ..|...|+|+++
T Consensus 81 ~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 81 LFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 1 11232 5666 9999998664 556778999986
No 145
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.21 E-value=37 Score=25.50 Aligned_cols=39 Identities=5% Similarity=-0.118 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
..++|||+++|..|.|--.-.-.+=++..+ +|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~--~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANL--TEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHH--HTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHH--CCCceEEEE
Confidence 456789999999886544444444555666 798888865
No 146
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=44.13 E-value=16 Score=29.19 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.||+++.+ |++- ..+++.|.+ .||+|+++...
T Consensus 4 ~~vlI~G~---G~vG--~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGH---SILA--INTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp SCEEEECC---SHHH--HHHHHHHHH--TTCCEEEEECC
T ss_pred CcEEEECC---CHHH--HHHHHHHHH--CCCCEEEEECC
Confidence 47888854 4333 788999999 99999999874
No 147
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=44.09 E-value=88 Score=28.94 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=26.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 46 k~vlVTGas~G---IG~aia~~La~--~Ga~Vvl~~r~ 78 (346)
T 3kvo_A 46 CTVFITGASRG---IGKAIALKAAK--DGANIVIAAKT 78 (346)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHT--TTCEEEEEESC
T ss_pred CEEEEeCCChH---HHHHHHHHHHH--CCCEEEEEECC
Confidence 67788877754 45788999999 99999988754
No 148
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=44.05 E-value=14 Score=33.55 Aligned_cols=33 Identities=15% Similarity=0.008 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
||||+|+..+..| ..+|..|.+ .||+|+++...
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~--~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQ--GGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred CCeEEEECcCHHH-----HHHHHHHHh--CCCcEEEEECC
Confidence 5799999876655 467899999 99999998753
No 149
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=43.78 E-value=81 Score=27.78 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
-|++++++++.| --.++|+.|.+ +|++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~--~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAA--AGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHH--TTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeC
Confidence 367788877653 45789999999 9999988765
No 150
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=43.28 E-value=18 Score=32.99 Aligned_cols=37 Identities=14% Similarity=-0.014 Sum_probs=24.4
Q ss_pred CCCc-EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 10 GRMC-HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 10 ~~~~-~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+.|+ +|+|+.. .|.+ -..++++|.+ +||+|+.++-..
T Consensus 8 ~~m~~~ilVtGa--tG~i--G~~l~~~L~~--~g~~V~~l~R~~ 45 (318)
T 2r6j_A 8 NGMKSKILIFGG--TGYI--GNHMVKGSLK--LGHPTYVFTRPN 45 (318)
T ss_dssp -CCCCCEEEETT--TSTT--HHHHHHHHHH--TTCCEEEEECTT
T ss_pred cCCCCeEEEECC--CchH--HHHHHHHHHH--CCCcEEEEECCC
Confidence 3443 5665533 2433 4578899999 999999887543
No 151
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=43.18 E-value=84 Score=27.19 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHG---IGKQICLDFLE--AGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 356777776653 45789999999 99999887654
No 152
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=42.68 E-value=18 Score=32.88 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+||||+|+..+..|. .+|+.|.+ .||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~--~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLK--AGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH--TTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHh--CCCeEEEEcCC
Confidence 578999998877664 67899999 99999988543
No 153
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=42.61 E-value=1.3e+02 Score=27.47 Aligned_cols=99 Identities=12% Similarity=0.136 Sum_probs=53.9
Q ss_pred EEEEEcCCCcc---ChH--HHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCC-CC--CeEEEecCCCCCCchhhhhc
Q 012096 14 HIVALPYPGRG---HIN--PMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGN-HN--NIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 14 ~il~~~~~~~G---H~~--p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~-~~--~~~~~~ip~~~~~~~~~~~~ 85 (471)
.|++.|+...+ .+. -+..+++.|.+ +|++|.++..+...+..+..... +. ......+..
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~--~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g----------- 248 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG----------- 248 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT-----------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHH--CCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccC-----------
Confidence 56666655221 333 68899999999 89999887665443322211000 00 000111110
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEec
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~ 143 (471)
...+.++..-++ .-|++|+-- ...+.+|..+|+|+|.++.
T Consensus 249 ------------~~sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 249 ------------ETQLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ------------TSCHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ------------cCCHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 011233333343 489999753 3355678889999999743
No 154
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=42.52 E-value=19 Score=32.94 Aligned_cols=36 Identities=14% Similarity=0.021 Sum_probs=28.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
..+||||+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~--~G~~V~~~dr~ 53 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLK--NGFKVTVWNRT 53 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHH--CCCeEEEEeCC
Confidence 4567899999776554 678999999 99999987643
No 155
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=42.45 E-value=1e+02 Score=26.84 Aligned_cols=32 Identities=6% Similarity=0.037 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|.+++++++.| --.++|+.|.+ +|++|.+...
T Consensus 9 k~vlVTGas~G---IG~aia~~la~--~G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD---IGRACAIRFAQ--EGANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CEEEEECCCch---HHHHHHHHHHH--CCCEEEEEcC
Confidence 56777776654 45789999999 9999988754
No 156
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=42.36 E-value=20 Score=27.68 Aligned_cols=33 Identities=18% Similarity=0.140 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|||+|+.. |.+ -..+++.|.+ .||+|+++...
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~--~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSE--KGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHh--CCCeEEEEECC
Confidence 368888844 444 3467899999 99999998764
No 157
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=42.36 E-value=23 Score=35.35 Aligned_cols=48 Identities=17% Similarity=0.034 Sum_probs=31.5
Q ss_pred CCccccccCCCCcEEEEEcCCCccCh---HHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 1 MDHSRMKATGRMCHIVALPYPGRGHI---NPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 1 ~~~~~~~~~~~~~~il~~~~~~~GH~---~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+.|.+... +|+|.+++.++..|++ .-.-+|++.|++ ||++|+.+=..
T Consensus 1 ~~~~~~~~~-~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~--~g~~v~~~k~~ 51 (550)
T 1vco_A 1 MNGSADAGP-RPRKYVFITGGVVSSLGKGILTSSLGALLRA--RGYRVTAIKID 51 (550)
T ss_dssp ----------CCCEEEEEEECSSSCSCHHHHHHHHHHHHHT--TTCCEEEEEEE
T ss_pred CCCcccCcc-cceeEEEEeCCcccCcchHHHHHHHHHHHHh--CCceeeEeecc
Confidence 455554443 3778889987766554 557889999999 99999998765
No 158
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=41.88 E-value=24 Score=31.88 Aligned_cols=40 Identities=18% Similarity=0.070 Sum_probs=24.9
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+...+|++|+|.... |. --..|++.|.+ +||+|+.++-.
T Consensus 1 M~~~~~~~~vlVtGat--G~--iG~~l~~~L~~--~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILITGGA--GF--IGGHLARALVA--SGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEETTT--SH--HHHHHHHHHHH--TTCCEEEECCC
T ss_pred CCcccCCCeEEEECCC--Ch--HHHHHHHHHHH--CCCEEEEEecC
Confidence 4444456777776543 32 24578999999 99999998754
No 159
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.54 E-value=34 Score=29.38 Aligned_cols=41 Identities=10% Similarity=-0.072 Sum_probs=35.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.+..+|++.+.++..|-....-++..|.. +|++|..+....
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~--~G~~Vi~LG~~v 130 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGA--NGFQIVDLGVDV 130 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHH--TSCEEEECCSSC
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHH--CCCeEEEcCCCC
Confidence 34578999999999999999999999999 999999988653
No 160
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=41.07 E-value=39 Score=25.57 Aligned_cols=65 Identities=12% Similarity=0.013 Sum_probs=45.8
Q ss_pred hhhcccceeeccCCcch---------HHHHHHcCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHH
Q 012096 346 LCHSSIGGFWTHCGLNS---------TLEAAYAGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEIT 416 (471)
Q Consensus 346 L~~~~~~~~IthgG~~s---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~ 416 (471)
+..+++ +|--.|..| +..|...|+|++++=.++.+. .-..+++ .|..+-. .+.+.|.
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~---~a~~iV~--------Wn~~~I~ 101 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEA---VSSEVVG--------WNPHCIR 101 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHH---HCSEEEC--------SCHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHh---hCceecc--------CCHHHHH
Confidence 556677 888888877 667888999999988777652 2233552 3433333 6889999
Q ss_pred HHHHHHhc
Q 012096 417 ELVKRFMD 424 (471)
Q Consensus 417 ~~i~~~l~ 424 (471)
++|+..++
T Consensus 102 ~aI~~~~~ 109 (111)
T 1eiw_A 102 DALEDALD 109 (111)
T ss_dssp HHHHHHHC
T ss_pred HHHHhccC
Confidence 99987753
No 161
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=40.95 E-value=26 Score=26.06 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCC-cEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPN-VFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rG-h~Vt~~~~~ 51 (471)
+++|+++..+.. -..+++.|.+ +| ++|+++...
T Consensus 5 ~~~v~I~G~G~i-----G~~~~~~l~~--~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKI-----GQMIAALLKT--SSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHH-----HHHHHHHHHH--CSSEEEEEEESC
T ss_pred cCeEEEECCCHH-----HHHHHHHHHh--CCCceEEEEeCC
Confidence 568888855332 3578999999 99 999888754
No 162
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=40.66 E-value=14 Score=33.96 Aligned_cols=45 Identities=7% Similarity=0.020 Sum_probs=31.4
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
...++||+|+..++.| ..+|..|.+ .||+|+++..++..+.+.+.
T Consensus 16 ~~~~~kI~IiGaGa~G-----~~~a~~L~~--~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 16 YFQGMKVAIMGAGAVG-----CYYGGMLAR--AGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp ----CEEEEESCSHHH-----HHHHHHHHH--TTCEEEEECCHHHHHHHHHH
T ss_pred hccCCcEEEECcCHHH-----HHHHHHHHH--CCCeEEEEEcHhHHHHHHhC
Confidence 3567899999888877 567899999 99999999444444555444
No 163
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=40.47 E-value=9.7 Score=34.82 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=30.2
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+..+++.+|+|+..+..| +..|..|++ +|++|+++-...
T Consensus 1 M~~~~~~~~vvIIG~G~aG-----l~aA~~l~~--~g~~v~lie~~~ 40 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVG-----LFTAFYGGM--RQASVKIIESLP 40 (332)
T ss_dssp CEEEEEEEEEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSSS
T ss_pred CCCCCccceEEEECCCHHH-----HHHHHHHHH--CCCCEEEEEcCC
Confidence 3333445689998887555 788999999 999999987653
No 164
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=40.25 E-value=1.1e+02 Score=26.80 Aligned_cols=34 Identities=6% Similarity=0.065 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|++++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 16 ~k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 49 (266)
T 3p19_A 16 KKLVVITGASSG---IGEAIARRFSE--EGHPLLLLARR 49 (266)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEECC
Confidence 467777777643 45688999999 99999887654
No 165
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=40.23 E-value=32 Score=28.67 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccChHHHHH-HHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMN-LCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~-La~~L~~~~rGh~Vt~~~~~ 51 (471)
+||||+++-+...|+..-+.. +++.|.+ .|++|.++--.
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~--~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQ--GGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHH--TTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhh--CCCEEEEEEhh
Confidence 467887777666787665544 5677888 89999887653
No 166
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=40.07 E-value=1.3e+02 Score=26.67 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=26.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 29 k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~r~ 61 (283)
T 3v8b_A 29 PVALITGAGSG---IGRATALALAA--DGVTVGALGRT 61 (283)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 57778777654 45789999999 99999888754
No 167
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=39.31 E-value=28 Score=26.66 Aligned_cols=41 Identities=7% Similarity=-0.029 Sum_probs=28.7
Q ss_pred cEEEEEcCCCc-cCh-HHHHHHHHHHHhcCCC--cEEEEEECccchh
Q 012096 13 CHIVALPYPGR-GHI-NPMMNLCKLLVSRNPN--VFITFVVTEEWLS 55 (471)
Q Consensus 13 ~~il~~~~~~~-GH~-~p~l~La~~L~~~~rG--h~Vt~~~~~~~~~ 55 (471)
+|++|+.+-+. -.. +..+.+|...++ +| |+|.++...+...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~--~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKN--RGWWKHINIILWGASVK 52 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHH--HTSCSEEEEEECSHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHH--cCCCCcEEEEEECCeee
Confidence 57766666543 232 457888989999 88 8999998765444
No 168
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=39.30 E-value=34 Score=29.03 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHH-hcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLV-SRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~-~~~rGh~Vt~~~~~ 51 (471)
.|||.+++++.+ |- --.++++.|. + +||+|+.++-.
T Consensus 3 ~mmk~vlVtGas-g~--iG~~~~~~l~~~--~g~~V~~~~r~ 39 (221)
T 3r6d_A 3 AMYXYITILGAA-GQ--IAQXLTATLLTY--TDMHITLYGRQ 39 (221)
T ss_dssp CSCSEEEEESTT-SH--HHHHHHHHHHHH--CCCEEEEEESS
T ss_pred ceEEEEEEEeCC-cH--HHHHHHHHHHhc--CCceEEEEecC
Confidence 356644444433 22 3478899999 8 99999998754
No 169
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=38.65 E-value=17 Score=34.09 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+||+|+..+..| ..+|..|.+ .||+|+++...
T Consensus 15 M~kI~iIG~G~mG-----~~la~~L~~--~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFG-----TALAMVLSK--KCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHTT--TEEEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHh--CCCEEEEEECC
Confidence 4489999887666 468899999 99999998754
No 170
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.34 E-value=1.2e+02 Score=26.68 Aligned_cols=33 Identities=12% Similarity=0.085 Sum_probs=25.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|.+ +|++|.+....
T Consensus 32 k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~~~ 64 (271)
T 3v2g_A 32 KTAFVTGGSRG---IGAAIAKRLAL--EGAAVALTYVN 64 (271)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 57777777653 45789999999 99999887543
No 171
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=38.23 E-value=29 Score=28.02 Aligned_cols=35 Identities=17% Similarity=0.072 Sum_probs=28.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.++++++.+. | +.|++++++.|.+ +|.+|+++ ...
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~--~~~~v~l~-g~r 58 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQE--IGNDVTTL-HVT 58 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHH--HTCEEEEE-EEC
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHh--cCCcEEEE-EeC
Confidence 4777777765 3 9999999999999 88899998 554
No 172
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=38.16 E-value=2.3e+02 Score=25.64 Aligned_cols=107 Identities=10% Similarity=0.161 Sum_probs=60.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc--cchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcH
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE--EWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDF 86 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 86 (471)
...++||+++.++. || -+.+|..+.++-.-+.+|..+.+. ......++. ++.+..+|.... . +
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~-----gIp~~~~~~~~~-~--r---- 166 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH-----DIPYYHVPVDPK-D--K---- 166 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT-----TCCEEECCCCSS-C--C----
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc-----CCCEEEcCCCcC-C--H----
Confidence 34578998888776 55 355666665551124688877763 334455555 788877763211 0 0
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 87 LAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
...++.+.+++++. ++|+||+-.+. .-...+-+.+.-.++-+.+
T Consensus 167 --------~~~~~~~~~~l~~~-----~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 167 --------EPAFAEVSRLVGHH-----QADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp --------HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred --------HHHHHHHHHHHHHh-----CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 01122234445554 59999988765 3333344555555666544
No 173
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=38.15 E-value=22 Score=32.60 Aligned_cols=40 Identities=13% Similarity=0.142 Sum_probs=31.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
|||+|+..++.| ..+|..|.+ .||+|+++.... .+.+.+.
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~--~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAK--TGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHH--TTCEEEEECSTT-HHHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHh--CCCeEEEEeCCh-HHHHHhC
Confidence 689999888776 467889999 999999998765 3555444
No 174
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=37.82 E-value=1.1e+02 Score=25.98 Aligned_cols=104 Identities=7% Similarity=0.059 Sum_probs=54.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc-ch---hhhcCCCCCCCCeEEEecCCC-CCCchhhhhcH
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE-WL---SFIGSGHGNHNNIRFETIPNV-IPSELVRARDF 86 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~-~~---~~~~~~~~~~~~~~~~~ip~~-~~~~~~~~~~~ 86 (471)
|+||+++.++. |+ -+-+|.++.++-.-..+|.++.+.. .. +...+. ++.+..++.. +. +
T Consensus 2 m~riavl~Sg~-Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~-----gIp~~~~~~~~~~-------~- 65 (211)
T 3p9x_A 2 MKRVAIFASGS-GT--NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH-----EIPVCALDPKTYP-------S- 65 (211)
T ss_dssp -CEEEEECCTT-CH--HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT-----TCCEEECCGGGSS-------S-
T ss_pred CCEEEEEEeCC-ch--HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc-----CCCEEEeChhhcC-------c-
Confidence 67999988886 43 2566666665511235777766542 11 334444 6666655421 11 0
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 87 LAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
....+..+.+.++++ +||+||+-.+. .-...+-..+...++-+.+
T Consensus 66 -------r~~~d~~~~~~l~~~-----~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 66 -------KEAYEIEVVQQLKEK-----QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp -------HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred -------hhhhHHHHHHHHHhc-----CCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 011122234445554 59999988765 3344444555555666544
No 175
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=37.68 E-value=31 Score=31.40 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+||.|+.-+..|. ++|+.|.+ .||+|+++--
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~--~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLK--AGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHH--TTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHh--CCCeEEEEcC
Confidence 67899999998774 78999999 9999998753
No 176
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=37.56 E-value=92 Score=27.70 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=25.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 10 k~vlVTGas~G---IG~aia~~l~~--~G~~V~~~~r~ 42 (285)
T 3sc4_A 10 KTMFISGGSRG---IGLAIAKRVAA--DGANVALVAKS 42 (285)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHT--TTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEECC
Confidence 57777777654 45689999999 99999887754
No 177
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.56 E-value=18 Score=34.03 Aligned_cols=34 Identities=18% Similarity=0.056 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|||+|+..+..| .++|..|++ .||+|+++...
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~--~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLAR--KGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHT--TTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHH--CCCeEEEEeCC
Confidence 45799999988776 468999999 99999999875
No 178
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=37.52 E-value=32 Score=30.60 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+||+|+|.. + | .--..|++.|.+ +||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G--~iG~~l~~~L~~--~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-G--DLGLELARRLTA--QGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-S--HHHHHHHHHHHH--TTCCEEEEECT
T ss_pred CCCcEEEEC--C-C--HHHHHHHHHHHH--CCCEEEEEeCC
Confidence 356888774 4 6 345678999999 99999998764
No 179
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=37.49 E-value=90 Score=28.52 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|||+|+..+..+ +...++|.+ .||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~--~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALID--SSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHH--SSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHH--CCCeEEEEEeC
Confidence 3699999887654 355688888 89999877763
No 180
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=37.32 E-value=1.3e+02 Score=26.43 Aligned_cols=33 Identities=6% Similarity=-0.044 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|....-.
T Consensus 6 k~vlVTGas~g---IG~~~a~~l~~--~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGASSG---FGRAIAEAAVA--AGDTVIGTARR 38 (281)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred cEEEEECCCCh---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 56777776643 35688999999 99999887754
No 181
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=37.25 E-value=55 Score=27.69 Aligned_cols=43 Identities=14% Similarity=0.081 Sum_probs=29.3
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.++.-|+||+|+.+++.- ..-+....+.|.. .|++|+++++.
T Consensus 3 ~~~~~m~~~v~ill~~g~~-~~e~~~~~~~l~~--ag~~v~~vs~~ 45 (208)
T 3ot1_A 3 AMEQGMSKRILVPVAHGSE-EMETVIIVDTLVR--AGFQVTMAAVG 45 (208)
T ss_dssp ------CCEEEEEECTTCC-HHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred ccccccCCeEEEEECCCCc-HHHHHHHHHHHHH--CCCEEEEEEcC
Confidence 3333335689998887643 5556667789999 99999999985
No 182
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=36.82 E-value=55 Score=28.66 Aligned_cols=39 Identities=8% Similarity=0.022 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCc----------c-ChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGR----------G-HINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~----------G-H~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+||+|+..... | ...=++.....|++ .|++|+++++..
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~--aG~~V~iaS~~g 52 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK--HGFEVDFVSETG 52 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT--TTCEEEEEESSS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 678888877532 2 23446777889999 999999999753
No 183
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=36.64 E-value=21 Score=32.49 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
..|+||+|+..+..|+ .+|..|++ .||+|+++...
T Consensus 13 ~~~~~I~VIG~G~mG~-----~iA~~la~--~G~~V~~~d~~ 47 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGA-----GIAQVAAA--TGHTVVLVDQT 47 (302)
T ss_dssp CCCCEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHH-----HHHHHHHh--CCCeEEEEECC
Confidence 3567899998877665 58889999 99999987653
No 184
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=36.41 E-value=36 Score=26.90 Aligned_cols=36 Identities=14% Similarity=0.011 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
..++++++.+. =+.|++++++.|.+ +|.+|+++ ...
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~--~~~~v~l~-g~R 53 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQE--IGNDVTTL-HVT 53 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHH--TTCEEEEE-EEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHh--cCCcEEEE-EeC
Confidence 35788877765 48999999999999 89999998 543
No 185
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.36 E-value=21 Score=33.59 Aligned_cols=29 Identities=17% Similarity=0.090 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEE
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFV 48 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~ 48 (471)
|||+|+..+--| +.+|..|++ +||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~--~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRK--HGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHh--CCCCEEEE
Confidence 689999776544 888999999 99999987
No 186
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=36.33 E-value=46 Score=26.14 Aligned_cols=39 Identities=13% Similarity=0.242 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHH-HHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPM-MNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~-l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
||||+|+-+...|+..-+ -.|++.|.+ +|++|.++-...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~--~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAA--GGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHT--TTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHh--CCCeEEEEehhh
Confidence 567777766667877654 446788888 899999887654
No 187
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=36.23 E-value=56 Score=28.43 Aligned_cols=23 Identities=13% Similarity=0.114 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 28 PMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 28 p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.-.++|++|.+ +|++|++++.+.
T Consensus 31 mG~aiA~~~~~--~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLS--AGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHH--TTCEEEEEECTT
T ss_pred HHHHHHHHHHH--CCCEEEEEeCCc
Confidence 46788999999 999999999764
No 188
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.17 E-value=1.2e+02 Score=26.61 Aligned_cols=33 Identities=15% Similarity=0.136 Sum_probs=27.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|++ +|.+|.++.-.
T Consensus 8 KvalVTGas~G---IG~aiA~~la~--~Ga~Vv~~~~~ 40 (254)
T 4fn4_A 8 KVVIVTGAGSG---IGRAIAKKFAL--NDSIVVAVELL 40 (254)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEeCCCCH---HHHHHHHHHHH--cCCEEEEEECC
Confidence 78999988876 46789999999 99999887643
No 189
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=36.11 E-value=36 Score=25.57 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=28.8
Q ss_pred CCCcEEEEEcCCCccChHHHH-HHHHHHHhcCCCcE-EEEEE
Q 012096 10 GRMCHIVALPYPGRGHINPMM-NLCKLLVSRNPNVF-ITFVV 49 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l-~La~~L~~~~rGh~-Vt~~~ 49 (471)
.+|+||+++|..+.|.-.-+- .+-+.+.+ .|.+ +.+-.
T Consensus 16 ~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~--~gi~~~~i~~ 55 (110)
T 3czc_A 16 GSMVKVLTACGNGMGSSMVIKMKVENALRQ--LGVSDIESAS 55 (110)
T ss_dssp --CEEEEEECCCCHHHHHHHHHHHHHHHHH--TTCCCEEEEE
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHHHHHH--cCCCeEEEEE
Confidence 346899999999999888777 67778888 8877 54433
No 190
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=35.77 E-value=88 Score=28.45 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=22.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|+..+. ......++|.+ +||+|..+.+.
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~--~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLA--AGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHH--TTCEEEEEECC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHH--CCCcEEEEEcC
Confidence 5788876532 23555788888 89999877764
No 191
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=35.75 E-value=25 Score=32.23 Aligned_cols=36 Identities=3% Similarity=0.023 Sum_probs=28.9
Q ss_pred EEEEcCCCccChH--------------HHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 15 IVALPYPGRGHIN--------------PMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 15 il~~~~~~~GH~~--------------p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+|.++|+.=.+. ...++|+++.+ +|++|++++.+.
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~--~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA--AGYGVLFLYRAR 89 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH--TTCEEEEEEETT
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH--CCCEEEEEecCC
Confidence 7777777755552 67789999999 999999999764
No 192
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=35.72 E-value=16 Score=31.52 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
++||||+|+..+..| ..+|+.|.+ .||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~--~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTA--AQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHH--TTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHh--CCCEEEEEEC
Confidence 457899999866555 568999999 9999988443
No 193
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=35.69 E-value=35 Score=30.36 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=34.0
Q ss_pred CCCcEEEEEcCC---CccChHHHHHHHHHHHhcCCCcEEEEEECccchh
Q 012096 10 GRMCHIVALPYP---GRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLS 55 (471)
Q Consensus 10 ~~~~~il~~~~~---~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~ 55 (471)
+..||++|++++ +.|-=.-.-+|+..|+. ||++||..=-.++..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~--~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKS--CGLHVTSIKIDPYIN 66 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH--TTCCEEEEEEECSSC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHH--CCCcceeeeccccee
Confidence 455799999997 34555678889999999 999999987665443
No 194
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=35.56 E-value=1.4e+02 Score=26.24 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=26.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 25 k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~r~ 57 (279)
T 3sju_A 25 QTAFVTGVSSG---IGLAVARTLAA--RGIAVYGCARD 57 (279)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEeCCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 67788877754 45789999999 99999887654
No 195
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=35.41 E-value=34 Score=30.69 Aligned_cols=39 Identities=10% Similarity=0.156 Sum_probs=30.6
Q ss_pred CcEEEEEcC--CCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPY--PGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~--~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+|++.+.. ++.|=..-...||..|++ +|++|.++=...
T Consensus 3 M~kvI~v~s~KGGvGKTT~a~nLA~~La~--~G~~VlliD~D~ 43 (286)
T 2xj4_A 3 ETRVIVVGNEKGGAGKSTIAVHLVTALLY--GGAKVAVIDLDL 43 (286)
T ss_dssp -CEEEEECCSSSCTTHHHHHHHHHHHHHH--TTCCEEEEECCT
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHH--CCCcEEEEECCC
Confidence 666655554 678999999999999999 999999876543
No 196
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=35.30 E-value=2.2e+02 Score=24.60 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=19.6
Q ss_pred CceEEEEcCchh-hHHHHHhhcCCCeEEE
Q 012096 114 VVSAIIVDTFLA-WAVDVGNRRNIPVASF 141 (471)
Q Consensus 114 ~~D~vI~D~~~~-~~~~~A~~lgIP~v~~ 141 (471)
++|.||...... .....+...+||+|.+
T Consensus 63 ~vdgiIi~~~~~~~~~~~l~~~~iPvV~i 91 (276)
T 3jy6_A 63 GFDGLILQSFSNPQTVQEILHQQMPVVSV 91 (276)
T ss_dssp TCSEEEEESSCCHHHHHHHHTTSSCEEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHCCCCEEEE
Confidence 699999766543 3334455679999997
No 197
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=35.17 E-value=1.8e+02 Score=25.46 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=31.0
Q ss_pred hHHHHHHHHHhhhcCCCceEEEEcCch---hhHHHHHhhcCCCeEE
Q 012096 98 EAPFEKVLDFLQVEAPVVSAIIVDTFL---AWAVDVGNRRNIPVAS 140 (471)
Q Consensus 98 ~~~~~~ll~~l~~~~~~~D~vI~D~~~---~~~~~~A~~lgIP~v~ 140 (471)
+..++.+++.+++ -.+.++|... .-+..+|+.+|+|++.
T Consensus 114 ~~~m~~vm~~l~~----~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE----KNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH----TTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH----CCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 3457778888874 5689999874 5678899999999998
No 198
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=35.14 E-value=21 Score=32.89 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++++||+|+..+..| .++|..|++ .||+|+++-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~--~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 456799999877665 578999999 99999998654
No 199
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=35.06 E-value=1.9e+02 Score=23.72 Aligned_cols=146 Identities=13% Similarity=0.056 Sum_probs=73.5
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcc
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLN 361 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~ 361 (471)
+.|.|-|-+||.+ +....++....++.++..+=..+-+- .+.|+. +..|.-. ...-.++.+|.=.|.-
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~sa-----HR~p~~--l~~~~~~---a~~~g~~ViIa~AG~a 78 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSA-----HRMPDE--MFDYAEK---ARERGLRAIIAGAGGA 78 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHH--HHHHHHH---HTTTTCSEEEEEEESS
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcc-----ccCHHH--HHHHHHH---HHhcCCeEEEEecccc
Confidence 3456777788877 35667778888888887654333221 111110 0111111 1112344488776643
Q ss_pred ----hHHHHHHcCCceecccccccccchhhhhhhhh----cceeeee-cCCCCCCCccCHHHHHHHHHHHhcCCchhHHH
Q 012096 362 ----STLEAAYAGVPMLTFPIMMDQVPNSKLIVEDW----KIGWKVK-KPEIGSESLVTRDEITELVKRFMDLNNDERKA 432 (471)
Q Consensus 362 ----s~~eal~~GvP~v~~P~~~DQ~~na~~v~~~l----G~G~~l~-~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 432 (471)
++.-+ ..-+|+|.+|.......-.+-+-..+ |+.+..- . .. .+-.++.-++..|- -++| +.
T Consensus 79 ahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i-~~--~~a~NAallA~~IL-a~~d-----~~ 148 (173)
T 4grd_A 79 AHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAI-GE--AGAANAALFAVSIL-SGNS-----VD 148 (173)
T ss_dssp CCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCS-SH--HHHHHHHHHHHHHH-TTSC-----HH
T ss_pred ccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEec-CC--cchHHHHHHHHHHH-cCCC-----HH
Confidence 34433 46799999998654322222111111 3332211 1 00 01123333433331 2344 89
Q ss_pred HHHHHHHHHHHHHHhHh
Q 012096 433 MSKRAREVQEICQEAVA 449 (471)
Q Consensus 433 ~~~~a~~l~~~~~~~~~ 449 (471)
++++.+.++++.++.+.
T Consensus 149 l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 149 YANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998887644
No 200
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=34.89 E-value=26 Score=30.32 Aligned_cols=37 Identities=19% Similarity=0.117 Sum_probs=31.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|..-++.|=..-...||..|++ +|++|.++=..
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~--~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMAS--DYDKIYAVDGD 37 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTT--TCSCEEEEEEC
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 57888766788999999999999999 99999988643
No 201
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=34.61 E-value=25 Score=32.64 Aligned_cols=33 Identities=9% Similarity=-0.039 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|||+|+..+..| ..+|..|.+ .||+|+++...
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~--~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLAL--KGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHh--CCCEEEEEeCC
Confidence 4799999776655 457888999 99999988653
No 202
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=34.60 E-value=52 Score=24.48 Aligned_cols=33 Identities=15% Similarity=0.187 Sum_probs=22.0
Q ss_pred CceEEEEcCch--hhHHHHHhhc-------CCCeEEEecchH
Q 012096 114 VVSAIIVDTFL--AWAVDVGNRR-------NIPVASFWSMSA 146 (471)
Q Consensus 114 ~~D~vI~D~~~--~~~~~~A~~l-------gIP~v~~~~~~~ 146 (471)
+||+||.|... ..+..+.+.+ ++|++.++....
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 87 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGG 87 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCS
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCc
Confidence 69999999765 2344444432 589888876543
No 203
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=34.50 E-value=1.5e+02 Score=25.99 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=25.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|.+++++++.| --.++|+.|.+ +|++|.+..-
T Consensus 30 k~vlITGas~g---IG~~la~~l~~--~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLAS--MGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHH--TTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEeC
Confidence 56777777654 45789999999 9999998876
No 204
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=34.41 E-value=91 Score=26.84 Aligned_cols=17 Identities=0% Similarity=-0.187 Sum_probs=11.6
Q ss_pred HHHHHHHhcCCCcEEEEEE
Q 012096 31 NLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 31 ~La~~L~~~~rGh~Vt~~~ 49 (471)
.....+.+ +|++|++++
T Consensus 20 gtia~~~~--~G~~v~vv~ 36 (227)
T 1uan_A 20 GTLARAKA--EGLSTGILD 36 (227)
T ss_dssp HHHHHHHH--TTCCEEEEE
T ss_pred HHHHHHHh--CCCcEEEEE
Confidence 34455667 899987776
No 205
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=34.39 E-value=92 Score=23.95 Aligned_cols=45 Identities=4% Similarity=-0.093 Sum_probs=32.1
Q ss_pred EEE-EEcCCCcc--ChHHHHHHHHHHHhcCCCcEE-EEEECccchhhhcCC
Q 012096 14 HIV-ALPYPGRG--HINPMMNLCKLLVSRNPNVFI-TFVVTEEWLSFIGSG 60 (471)
Q Consensus 14 ~il-~~~~~~~G--H~~p~l~La~~L~~~~rGh~V-t~~~~~~~~~~~~~~ 60 (471)
|++ ++..+..| .....+.+|.++.+ .||+| .++-..+......+.
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~--~g~~v~~vff~~dGV~~~~~~ 50 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALE--KGHEIFRVFFYHDGVNNSTRL 50 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHH--TTCEEEEEEECGGGGGGGBSC
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHh--cCCeeCEEEEechHHHHHhcC
Confidence 443 33444343 56678999999999 99999 999888776665543
No 206
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=34.04 E-value=37 Score=28.35 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccChHHHHH-HHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMN-LCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~-La~~L~~~~rGh~Vt~~~~~ 51 (471)
+||||+++.+. .|+..-+.. +++.|.+ .|++|.++--.
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~--~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEE--AGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHH--HSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHh--CCCEEEEEehh
Confidence 36788888777 887766554 4677777 79999887654
No 207
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=33.97 E-value=75 Score=26.95 Aligned_cols=46 Identities=7% Similarity=0.074 Sum_probs=32.1
Q ss_pred hccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEE
Q 012096 273 YFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWV 318 (471)
Q Consensus 273 ~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~ 318 (471)
+.+|+.....+.++||..+|........+..+.++++++++.+.+.
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445533333459999988775444567788999999999987653
No 208
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=33.74 E-value=48 Score=29.16 Aligned_cols=41 Identities=12% Similarity=-0.075 Sum_probs=27.0
Q ss_pred cCCCCcEEEEEcCCCc--cChHHHHH-HHHHHHhcCCCcEEEEEEC
Q 012096 8 ATGRMCHIVALPYPGR--GHINPMMN-LCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~--GH~~p~l~-La~~L~~~~rGh~Vt~~~~ 50 (471)
....||||+++.+..+ |...-+.. +++.+.+ .|++|.++--
T Consensus 30 ~~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~--~g~eve~idL 73 (247)
T 2q62_A 30 FSTHRPRILILYGSLRTVSYSRLLAEEARRLLEF--FGAEVKVFDP 73 (247)
T ss_dssp CCCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHH--TTCEEEECCC
T ss_pred ccCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhh--CCCEEEEEEh
Confidence 3455788877776543 55545444 5677777 8999888653
No 209
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=33.55 E-value=2.2e+02 Score=24.09 Aligned_cols=105 Identities=10% Similarity=0.130 Sum_probs=54.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch----hhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHH
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL----SFIGSGHGNHNNIRFETIPNVIPSELVRARDFLA 88 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 88 (471)
+||+++.++..+- +-+|.+.+++..-+|+|..+.+.... +...+. ++.+..++..-. .+ .
T Consensus 1 ~riaVl~SG~Gs~---L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~~~~~------~~-r- 64 (209)
T 1meo_A 1 ARVAVLISGTGSN---LQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA-----GIPTRVINHKLY------KN-R- 64 (209)
T ss_dssp CEEEEEESSSCTT---HHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT-----TCCEEECCGGGS------SS-H-
T ss_pred CeEEEEEECCchH---HHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc-----CCCEEEECcccc------Cc-h-
Confidence 3788887776544 34455666662127898777654322 223334 666655442110 00 0
Q ss_pred HHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 89 FVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
......+.+.++++ +||+||+-.+. .....+-..+.-.++-+.++
T Consensus 65 ------~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 65 ------VEFDSAIDLVLEEF-----SIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ------HHHHHHHHHHHHHT-----TCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------hhhhHHHHHHHHhc-----CCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 01111233445544 59999987765 33344445555566766443
No 210
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=33.53 E-value=1e+02 Score=24.99 Aligned_cols=124 Identities=16% Similarity=0.159 Sum_probs=63.9
Q ss_pred EEEEEeCCCcCCCH-H-HHHHHHHHHHhCCCcEEEEEcCC-CCccccccC-C-CceEee--ccchHHhhhhcccceee-c
Q 012096 285 VLYVSLGSLWSVSS-V-QMDEIVAGVRNSGVRFFWVSRGD-TSWFKDGCV-D-RGIVVP--WCDQLEVLCHSSIGGFW-T 356 (471)
Q Consensus 285 ~I~vs~GS~~~~~~-~-~~~~~~~al~~~~~~vi~~~~~~-~~~~~~~~~-~-nv~v~~--~~pq~~lL~~~~~~~~I-t 356 (471)
.||++ |....... . .+..+.+.|++.+ .|+ .... .... .... . +.. .. +.-....+..|++.+++ +
T Consensus 13 kVYLA-Gp~~~~~~~~~~~~~i~~~l~~~G-~V~--~~~~~~p~~-~~~g~~~~~~-~~~i~~~d~~~i~~aD~vva~~~ 86 (165)
T 2khz_A 13 SVYFC-GSIRGGREDQALYARIVSRLRRYG-KVL--TEHVADAEL-EPLGEEAAGG-DQFIHEQDLNWLQQADVVVAEVT 86 (165)
T ss_dssp EEEEE-CCCSSCSHHHHHHHHHHHHHHHHS-EES--GGGTTTTSS-SCCSTTSTTC-HHHHHHHHHHHHHHCSEEEEECS
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHHHhcC-Ccc--cccccCchh-hccccccccC-HHHHHHHHHHHHHhCCEEEEECC
Confidence 79997 44443333 2 4677889999888 664 1111 0100 0000 0 000 00 11223467788883332 3
Q ss_pred cCCcchHHHH---HHcCCceeccccccc-ccchhhhhhhhhccee--eeecCCCCCCCccCHHHHHHHHHHHhc
Q 012096 357 HCGLNSTLEA---AYAGVPMLTFPIMMD-QVPNSKLIVEDWKIGW--KVKKPEIGSESLVTRDEITELVKRFMD 424 (471)
Q Consensus 357 hgG~~s~~ea---l~~GvP~v~~P~~~D-Q~~na~~v~~~lG~G~--~l~~~~~~~~~~~~~~~l~~~i~~~l~ 424 (471)
.-..|+..|. ...|+|++++=--.+ ...|+- ++ |... .+.. ...+.++|...|.+++.
T Consensus 87 ~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~---g~~~~~~~~~------~~y~~~el~~~l~~~~~ 150 (165)
T 2khz_A 87 QPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IR---GAADGSRFQV------WDYAEGEVETMLDRYFE 150 (165)
T ss_dssp SCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HH---HTCCSSSEEE------EECCTTTHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hc---ccCccceeEE------EecCHHHHHHHHHHHHH
Confidence 5568999986 778999999721112 233433 43 5543 1221 01266677777766654
No 211
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=33.40 E-value=51 Score=27.94 Aligned_cols=35 Identities=9% Similarity=-0.029 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
..+++|+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 17 ~~~~~I~iiG~G~mG-----~~la~~l~~--~g~~V~~~~~~ 51 (209)
T 2raf_A 17 FQGMEITIFGKGNMG-----QAIGHNFEI--AGHEVTYYGSK 51 (209)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECTT
T ss_pred cCCCEEEEECCCHHH-----HHHHHHHHH--CCCEEEEEcCC
Confidence 346789999766555 678899999 99999988643
No 212
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=33.39 E-value=84 Score=23.81 Aligned_cols=45 Identities=7% Similarity=-0.026 Sum_probs=31.5
Q ss_pred EEEE-EcCCCccCh--HHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 14 HIVA-LPYPGRGHI--NPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 14 ~il~-~~~~~~GH~--~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
|++| +..+-.|+. .-.+.+|.++.. .||+|.++-..+......+.
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a--~~~~v~vff~~DGV~~~~~~ 50 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSA--LTDDLAVFFIADGVFQLLPG 50 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHT--TCSCEEEEECGGGGGGGCTT
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHh--CCCCEEEEEehHHHHHHhcc
Confidence 4444 344444655 667888999988 89999999888766655543
No 213
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=33.34 E-value=49 Score=26.94 Aligned_cols=39 Identities=13% Similarity=-0.021 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
++||+++++++....=.+-.+.++++.++ .+.+|.+...
T Consensus 2 ~~mm~i~i~~GsFDPiH~GHl~li~~A~~--~~d~viv~v~ 40 (162)
T 4f3r_A 2 NAMKPIAIYPGTFDPLTNGHVDIIERALP--LFNKIIVACA 40 (162)
T ss_dssp ---CCEEEEEECCTTCCHHHHHHHHHHGG--GCSEEEEEEC
T ss_pred CCceEEEEEEEEcCCCCHHHHHHHHHHHH--HCCcEEEEEe
Confidence 46788988888544433445677777777 7778877665
No 214
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=33.32 E-value=28 Score=30.34 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+|||+|+..+..|- +||+.|++ +||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~--~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDS--VGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHH--TTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHH--CCCEEEEecCH
Confidence 347999999998874 58999999 99999987664
No 215
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=33.23 E-value=48 Score=24.80 Aligned_cols=36 Identities=17% Similarity=0.044 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
.|||+++|..|.|+-.-.-.+-+.+.+ +|.++.+-+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~--~gi~~~i~~ 39 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKS--KNINATIEA 39 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHH--HTCSEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHH--CCCCeEEEE
Confidence 368999999999988556666778888 887655433
No 216
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=33.21 E-value=47 Score=25.91 Aligned_cols=41 Identities=15% Similarity=0.147 Sum_probs=0.0
Q ss_pred HHHHHHhhhcCCCceEEEEcCch--hhHHHHHhhc-------CCCeEEEecc
Q 012096 102 EKVLDFLQVEAPVVSAIIVDTFL--AWAVDVGNRR-------NIPVASFWSM 144 (471)
Q Consensus 102 ~~ll~~l~~~~~~~D~vI~D~~~--~~~~~~A~~l-------gIP~v~~~~~ 144 (471)
.+.++.++.. +||+||.|... .-|..+++.. ++|+|.++..
T Consensus 47 ~~al~~~~~~--~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~ 96 (134)
T 3to5_A 47 LTALPMLKKG--DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE 96 (134)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred HHHHHHHHhC--CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
No 217
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=33.15 E-value=1.9e+02 Score=25.02 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAK--EGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 57777777654 45789999999 99999887654
No 218
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=32.85 E-value=83 Score=26.50 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
||+|+|.... |. --..|++.|.+ +||+|+.++-..
T Consensus 4 m~~ilItGat--G~--iG~~l~~~L~~--~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGAS--GF--VGSALLNEALN--RGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCC--HH--HHHHHHHHHHT--TTCEEEEECSCG
T ss_pred CCEEEEEcCC--ch--HHHHHHHHHHH--CCCEEEEEEcCc
Confidence 6788776433 32 34578999999 999999987653
No 219
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=32.84 E-value=1.1e+02 Score=28.21 Aligned_cols=99 Identities=7% Similarity=0.031 Sum_probs=55.5
Q ss_pred cEEEEEcCCCcc--Ch--HHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHH
Q 012096 13 CHIVALPYPGRG--HI--NPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLA 88 (471)
Q Consensus 13 ~~il~~~~~~~G--H~--~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 88 (471)
.-|+|.|+.+.. .+ .-+..|++.|.+ +|++|.+++.+...+..+.....- +-....+..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~--~g~~vvl~g~~~e~~~~~~i~~~~-~~~~~~l~g-------------- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGR--LGYKTVFFGGPMDLEMVQPVVEQM-ETKPIVATG-------------- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHH--HTCEEEECCCTTTHHHHHHHHHTC-SSCCEECTT--------------
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHh--CCCeEEEEeCcchHHHHHHHHHhc-ccccEEeeC--------------
Confidence 356777766443 33 358999999999 899998877655444332210000 000011110
Q ss_pred HHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEec
Q 012096 89 FVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~ 143 (471)
...+.++..-+. .-|++|+-- ...+.+|..+|+|+|.++.
T Consensus 249 ---------~~sl~e~~ali~----~a~~~i~~D--sG~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 249 ---------KFQLGPLAAAMN----RCNLLITND--SGPMHVGISQGVPIVALYG 288 (349)
T ss_dssp ---------CCCHHHHHHHHH----TCSEEEEES--SHHHHHHHTTTCCEEEECS
T ss_pred ---------CCCHHHHHHHHH----hCCEEEECC--CCHHHHHHhcCCCEEEEEC
Confidence 001233333333 489999752 3355678899999999743
No 220
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=32.47 E-value=25 Score=27.13 Aligned_cols=29 Identities=24% Similarity=0.210 Sum_probs=20.1
Q ss_pred CceEEEEcCch--hhHHHHHhh---cCCCeEEEe
Q 012096 114 VVSAIIVDTFL--AWAVDVGNR---RNIPVASFW 142 (471)
Q Consensus 114 ~~D~vI~D~~~--~~~~~~A~~---lgIP~v~~~ 142 (471)
+||+||.|... .-+..+++. .++|+|.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 79999999876 234444443 579987754
No 221
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=32.29 E-value=35 Score=31.19 Aligned_cols=33 Identities=6% Similarity=-0.066 Sum_probs=27.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEW 53 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~ 53 (471)
|+|+++..+ ....+++++++ +||+|.++.+...
T Consensus 3 m~Ililg~g------~~~~l~~a~~~--~G~~v~~~~~~~~ 35 (334)
T 2r85_A 3 VRIATYASH------SALQILKGAKD--EGFETIAFGSSKV 35 (334)
T ss_dssp SEEEEESST------THHHHHHHHHH--TTCCEEEESCGGG
T ss_pred eEEEEECCh------hHHHHHHHHHh--CCCEEEEEECCCC
Confidence 689999876 56789999999 9999999887643
No 222
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=31.99 E-value=84 Score=31.03 Aligned_cols=73 Identities=11% Similarity=0.041 Sum_probs=44.5
Q ss_pred HHHHHHHHhCCCcEEEEEcCCC-CccccccCCCceEeeccc-hHHh---------hhhcccceeeccCCc------chHH
Q 012096 302 DEIVAGVRNSGVRFFWVSRGDT-SWFKDGCVDRGIVVPWCD-QLEV---------LCHSSIGGFWTHCGL------NSTL 364 (471)
Q Consensus 302 ~~~~~al~~~~~~vi~~~~~~~-~~~~~~~~~nv~v~~~~p-q~~l---------L~~~~~~~~IthgG~------~s~~ 364 (471)
+.+++.|.+.|++.+..+++.. ..+...+.+.+..+.-.. |... -.++.+ +++|.|- +.+.
T Consensus 6 ~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsGpG~~N~~~~l~ 83 (528)
T 1q6z_A 6 GTTYELLRRQGIDTVFGNPGSNALPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSAAGTGNAMGALS 83 (528)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGGHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHHHHHHHTHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCcchHHHHHHHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCChHHHHHHHHHH
Confidence 5578888888988888877653 111111112344443322 2211 123344 7788774 4789
Q ss_pred HHHHcCCceecc
Q 012096 365 EAAYAGVPMLTF 376 (471)
Q Consensus 365 eal~~GvP~v~~ 376 (471)
||-+.++|+|++
T Consensus 84 ~A~~~~~Pll~i 95 (528)
T 1q6z_A 84 NAWNSHSPLIVT 95 (528)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHhhcCCCEEEE
Confidence 999999999998
No 223
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.74 E-value=1e+02 Score=23.88 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=36.3
Q ss_pred cCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Q 012096 369 AGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMSKRAREVQEIC 444 (471)
Q Consensus 369 ~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~ 444 (471)
..+|+|++--..+.. ......+. |+--.+.+ . ++.++|..+|++++.. ..++....++++.+
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~~-g~~~~l~k-P------~~~~~L~~~i~~~~~~-----~~~~~~~~~~~~~~ 135 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQD-GAYDFIAK-P------FAADRLVQSARRAEEK-----RRLVMENRSLRRAA 135 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHHT-TCCEEEES-S------CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHhc-CCCeEEeC-C------CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 478888775544432 33333324 66445554 2 5999999999999865 44444434443333
No 224
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.70 E-value=42 Score=27.32 Aligned_cols=38 Identities=11% Similarity=0.271 Sum_probs=30.4
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGR---GHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~---GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.+|+|+|+-+. --..+...|++.|++ +|.+|.|...+-
T Consensus 24 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~--~G~~V~faIHPV 64 (180)
T 1pno_A 24 SKVIIVPGYGMAVAQAQHALREMADVLKK--EGVEVSYAIHPV 64 (180)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeccc
Confidence 37888887543 245678899999999 999999999863
No 225
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=31.61 E-value=1.6e+02 Score=25.87 Aligned_cols=32 Identities=13% Similarity=0.013 Sum_probs=25.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-
T Consensus 16 k~~lVTGas~g---IG~a~a~~la~--~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG---QGRSHAVRLAA--EGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEec
Confidence 57777777653 45789999999 9999998764
No 226
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=31.25 E-value=24 Score=32.29 Aligned_cols=35 Identities=3% Similarity=-0.055 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCc-EEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNV-FITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh-~Vt~~~~~ 51 (471)
..||||+|+..+..| ..+|+.|.+ .|| +|+++...
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~--~G~~~V~~~dr~ 57 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQ--AGAIDMAAYDAA 57 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH--HSCCEEEEECSS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHH--CCCCeEEEEcCC
Confidence 457899999877655 578999999 999 99988763
No 227
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=31.20 E-value=1.8e+02 Score=25.06 Aligned_cols=33 Identities=9% Similarity=0.035 Sum_probs=24.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++++.|.+ +|++|.++.-.
T Consensus 3 k~vlVTGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 35 (258)
T 3a28_C 3 KVAMVTGGAQG---IGRGISEKLAA--DGFDIAVADLP 35 (258)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--HTCEEEEEECG
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 46666666542 45688999999 99999988754
No 228
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=31.16 E-value=63 Score=28.24 Aligned_cols=46 Identities=7% Similarity=0.144 Sum_probs=26.3
Q ss_pred CCccccccCCCC-cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 1 MDHSRMKATGRM-CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 1 ~~~~~~~~~~~~-~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+..|....++ -|.+++++++.| --.++++.|.+ +|++|.++.-.
T Consensus 1 m~~~~~~~~~~l~~k~vlVTGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 47 (260)
T 2zat_A 1 MASTGVERRKPLENKVALVTASTDG---IGLAIARRLAQ--DGAHVVVSSRK 47 (260)
T ss_dssp ---------CTTTTCEEEESSCSSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCcccccccCCCCCEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 334445444333 256777766542 35689999999 99999987653
No 229
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=31.09 E-value=2e+02 Score=25.51 Aligned_cols=33 Identities=9% Similarity=-0.004 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.+..-.
T Consensus 48 k~vlVTGas~G---IG~aia~~la~--~G~~V~~~~r~ 80 (291)
T 3ijr_A 48 KNVLITGGDSG---IGRAVSIAFAK--EGANIAIAYLD 80 (291)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 57777777654 45789999999 99999888754
No 230
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=31.08 E-value=2.9e+02 Score=24.73 Aligned_cols=108 Identities=12% Similarity=0.136 Sum_probs=59.5
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc---chhhhcCCCCCCCCeEEEecCCCCCCchhhhh
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE---WLSFIGSGHGNHNNIRFETIPNVIPSELVRAR 84 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~---~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~ 84 (471)
...+++||+++.++. || -+.+|..+.++-.-..+|.++.+.. ..+..++. ++.+..+|.... . +
T Consensus 85 ~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~-----gIp~~~~~~~~~-~--r-- 151 (288)
T 3obi_A 85 DRETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG-----DIPFYHFPVNKD-T--R-- 151 (288)
T ss_dssp ETTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT-----TCCEEECCCCTT-T--H--
T ss_pred ccCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc-----CCCEEEeCCCcc-c--H--
Confidence 345678998888876 54 3345555554410235777776543 22232223 888888774321 0 0
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 85 DFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
...+..+.+++++. ++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 152 ----------~~~~~~~~~~l~~~-----~~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 152 ----------RQQEAAITALIAQT-----HTDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp ----------HHHHHHHHHHHHHH-----TCCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ----------HHHHHHHHHHHHhc-----CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 11122344455554 59999988765 4444455555555666544
No 231
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=31.07 E-value=43 Score=27.36 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=29.6
Q ss_pred EEEEEcCCCc--c-ChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGR--G-HINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~--G-H~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|+|+|+-+. . -..+.-.|++.|.+ +|.+|.|...+
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~--~G~~V~faIHP 62 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSE--QGKKVRFGIHP 62 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecc
Confidence 7888887543 2 34678899999999 99999999986
No 232
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=31.04 E-value=28 Score=27.23 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.||+|+.++..| ..+++.|.+ .||+|+++....
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~--~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLA--SDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESCH
T ss_pred CCEEEECcCHHH-----HHHHHHHHH--CCCCEEEEECCH
Confidence 578888775544 578999999 999999998754
No 233
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=31.01 E-value=44 Score=29.15 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=29.7
Q ss_pred CcEEEEEcC--CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPY--PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~--~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+|++.+.. ++.|=..-...||..|++ +|++|.++=..
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~--~g~~VlliD~D 40 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQ--KGKKTVVIDFA 40 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHh--CCCcEEEEECC
Confidence 445555443 577899999999999999 99999998654
No 234
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=30.63 E-value=32 Score=30.88 Aligned_cols=33 Identities=18% Similarity=-0.008 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+||+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 1 M~~I~iiG~G~mG-----~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMG-----GPMAANLVR--AGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHHH--HTCCEEEECSS
T ss_pred CCeEEEEccCHHH-----HHHHHHHHH--CCCeEEEEcCC
Confidence 5689999877766 457899999 99999988643
No 235
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=30.45 E-value=1.9e+02 Score=26.73 Aligned_cols=43 Identities=19% Similarity=0.203 Sum_probs=21.8
Q ss_pred CCccc--ccc--CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 1 MDHSR--MKA--TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 1 ~~~~~--~~~--~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||.. |.. ..++|||+++.. |.+-. .+++.|++ .++|+++.-.
T Consensus 1 ~~~~~~~~~~~~~g~~mkilvlGa---G~vG~--~~~~~L~~---~~~v~~~~~~ 47 (365)
T 3abi_A 1 MNHKVHHHHHHIEGRHMKVLILGA---GNIGR--AIAWDLKD---EFDVYIGDVN 47 (365)
T ss_dssp ---------------CCEEEEECC---SHHHH--HHHHHHTT---TSEEEEEESC
T ss_pred CCcccccccccccCCccEEEEECC---CHHHH--HHHHHHhc---CCCeEEEEcC
Confidence 56655 332 244589999943 55533 46778866 6899887643
No 236
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=30.38 E-value=3e+02 Score=24.71 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=21.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCC--cEEEEEEC
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPN--VFITFVVT 50 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rG--h~Vt~~~~ 50 (471)
.++|+|+|.... |. --..|++.|.+ +| ++|+....
T Consensus 22 ~~~~~vlVtGat--G~--iG~~l~~~L~~--~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTGGA--GF--IGSNFVHYMLQ--SYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEETTT--SH--HHHHHHHHHHH--HCTTEEEEEEEC
T ss_pred cCCCeEEEECCc--cH--HHHHHHHHHHh--hCCCcEEEEEec
Confidence 456777766543 32 23578899999 89 56665543
No 237
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=30.37 E-value=61 Score=27.30 Aligned_cols=38 Identities=8% Similarity=0.064 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHH-HHHHHHhcCCCcEEEEEEC
Q 012096 11 RMCHIVALPYPGRGHINPMMN-LCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~-La~~L~~~~rGh~Vt~~~~ 50 (471)
+||||+++-+...|+..-+.. +++.|.+ .|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~--~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRA--AGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHH--TTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhc--CCCEEEEEec
Confidence 577887777666787666554 4677777 8999887654
No 238
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=30.29 E-value=1.9e+02 Score=28.56 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=24.4
Q ss_pred HHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEE
Q 012096 101 FEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASF 141 (471)
Q Consensus 101 ~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~ 141 (471)
+++++++. +||++|.... ...+|+++|||++.+
T Consensus 448 l~~~i~~~-----~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 448 MEVVLEKL-----KPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH-----CCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHHHHHhc-----CCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 45556654 5999998743 456899999999964
No 239
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.25 E-value=2e+02 Score=25.24 Aligned_cols=33 Identities=12% Similarity=-0.027 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~--~G~~V~~~~r~ 43 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAE--AGADIAICDRC 43 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEECC
T ss_pred CEEEEeCCCch---HHHHHHHHHHH--CCCeEEEEeCC
Confidence 57777777654 45789999999 99999887753
No 240
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=30.19 E-value=55 Score=29.98 Aligned_cols=43 Identities=9% Similarity=-0.011 Sum_probs=34.8
Q ss_pred cCCCCcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 8 ATGRMCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 8 ~~~~~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+...|++|+|+.. ++-|=..-..+||..|++ +|++|.++....
T Consensus 9 ~~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~--~G~rVLlvD~D~ 52 (324)
T 3zq6_A 9 FNKGKTTFVFIGGKGGVGKTTISAATALWMAR--SGKKTLVISTDP 52 (324)
T ss_dssp CBTTBCEEEEEEESTTSSHHHHHHHHHHHHHH--TTCCEEEEECCS
T ss_pred CCCCCeEEEEEeCCCCchHHHHHHHHHHHHHH--CCCcEEEEeCCC
Confidence 3344456666655 688999999999999999 999999999764
No 241
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=30.18 E-value=33 Score=30.79 Aligned_cols=32 Identities=6% Similarity=-0.037 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
+||||+|+..+..|. .+|+.|.+ .||+|+++.
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGS-----PMAINLAR--AGHQLHVTT 33 (295)
T ss_dssp --CEEEECCCSTTHH-----HHHHHHHH--TTCEEEECC
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHh--CCCEEEEEc
Confidence 357999998777664 56888999 899998765
No 242
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=30.13 E-value=1.7e+02 Score=28.23 Aligned_cols=146 Identities=10% Similarity=-0.030 Sum_probs=73.4
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccC-CCceEeeccchHHhhhhcccceeeccCCcc
Q 012096 283 SSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCV-DRGIVVPWCDQLEVLCHSSIGGFWTHCGLN 361 (471)
Q Consensus 283 ~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~-~nv~v~~~~pq~~lL~~~~~~~~IthgG~~ 361 (471)
+.++.|..|... ...++.|.+.+..+.+.-....+.+..... .++.+..---+...|..+++ +|.--|.-
T Consensus 13 ~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l--Vi~at~~~ 83 (457)
T 1pjq_A 13 RDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWL--AIAATDDD 83 (457)
T ss_dssp CEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSE--EEECCSCH
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccE--EEEcCCCH
Confidence 458888777654 234455666788877765432222211111 23444322112233555565 77777765
Q ss_pred h-----HHHHHHcCCce--ecccccccccchhhhhhhh-hcceeeeecCCCCCCCccC-HHHHHHHHHHHhcCCchhHHH
Q 012096 362 S-----TLEAAYAGVPM--LTFPIMMDQVPNSKLIVED-WKIGWKVKKPEIGSESLVT-RDEITELVKRFMDLNNDERKA 432 (471)
Q Consensus 362 s-----~~eal~~GvP~--v~~P~~~DQ~~na~~v~~~-lG~G~~l~~~~~~~~~~~~-~~~l~~~i~~~l~~~~~~~~~ 432 (471)
. ..+|-..|+|+ +--|-..|...-|- +.+. +-+|+. . .. ...+ ...|++.|.+.+... ...
T Consensus 84 ~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~~~~~l~iaIs--T-~G---ksp~la~~ir~~ie~~l~~~---~~~ 153 (457)
T 1pjq_A 84 TVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-IDRSPLMVAVS--S-GG---TSPVLARLLREKLESLLPQH---LGQ 153 (457)
T ss_dssp HHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-EEETTEEEEEE--C-TT---SCHHHHHHHHHHHHHHSCTT---HHH
T ss_pred HHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-EEeCCeEEEEE--C-CC---CChHHHHHHHHHHHHhcchh---HHH
Confidence 3 44566678986 33333333221110 1111 123444 2 11 1122 566888888888542 246
Q ss_pred HHHHHHHHHHHHHHh
Q 012096 433 MSKRAREVQEICQEA 447 (471)
Q Consensus 433 ~~~~a~~l~~~~~~~ 447 (471)
+-+.+.++++++++.
T Consensus 154 ~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 154 VARYAGQLRARVKKQ 168 (457)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 666677777777654
No 243
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=29.99 E-value=49 Score=28.32 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=29.1
Q ss_pred cEEE-EEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIV-ALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il-~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|++ |... ++.|=..-...||..|++ +|++|.++=..
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~--~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGD--RGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHh--cCCeEEEEeCC
Confidence 3444 4333 577899999999999999 99999998754
No 244
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.96 E-value=1.2e+02 Score=26.30 Aligned_cols=32 Identities=13% Similarity=0.028 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
.|.+++++++.| --.++|+.|.+ +|++|.+..
T Consensus 13 ~k~vlITGas~g---iG~~ia~~l~~--~G~~v~~~~ 44 (256)
T 3ezl_A 13 QRIAYVTGGMGG---IGTSICQRLHK--DGFRVVAGC 44 (256)
T ss_dssp CEEEEETTTTSH---HHHHHHHHHHH--TTEEEEEEE
T ss_pred CCEEEEECCCCh---HHHHHHHHHHH--CCCEEEEEe
Confidence 467778777654 45789999999 999998877
No 245
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=29.96 E-value=54 Score=30.81 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCcc-C---hHHHHHHHHHH-HhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRG-H---INPMMNLCKLL-VSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~G-H---~~p~l~La~~L-~~~~rGh~Vt~~~~ 50 (471)
+|||+++.++-.+ | +.....++++| .+ +||+|..+-.
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~--~g~~v~~i~~ 44 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT--GKYEIIVFAI 44 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH--SSEEEEEEEE
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc--cCcEEEEEEE
Confidence 5789999876555 4 33578889999 99 9999998864
No 246
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=29.90 E-value=2.3e+02 Score=24.57 Aligned_cols=33 Identities=6% Similarity=-0.019 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++.+. ---.++++.|.+ +|++|.++.-.
T Consensus 9 k~vlVTGas~---gIG~~ia~~l~~--~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTGASM---GIGRAIAERFVD--EGSKVIDLSIH 41 (264)
T ss_dssp CEEEEESCSS---HHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEeCCCC---HHHHHHHHHHHH--CCCEEEEEecC
Confidence 4556665553 235688999999 99999887653
No 247
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=29.89 E-value=41 Score=30.51 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=24.6
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
||.|+..+..| .++|+.|.+ .||+|+++-
T Consensus 7 kIgfIGLG~MG-----~~mA~~L~~--~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLG-----TPIAEILLE--AGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTH-----HHHHHHHHH--TTCEEEEC-
T ss_pred cEEEEecHHHH-----HHHHHHHHH--CCCeEEEEe
Confidence 79999888776 478999999 999999864
No 248
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=29.83 E-value=46 Score=27.20 Aligned_cols=38 Identities=13% Similarity=0.219 Sum_probs=30.6
Q ss_pred cEEEEEcCCCc--c-ChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGR--G-HINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~--G-H~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.+|+|+|+-+. . -..+...|++.|++ +|.+|.|...+-
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~--~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRA--RGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHH--HCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH--CCCeEEEEeccc
Confidence 37899988643 2 34678899999999 999999999863
No 249
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=29.51 E-value=24 Score=30.60 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=25.3
Q ss_pred HHHHHHHhhhcCCCceEEEEcCchhh---HHHHH----hhcCCCeEEE
Q 012096 101 FEKVLDFLQVEAPVVSAIIVDTFLAW---AVDVG----NRRNIPVASF 141 (471)
Q Consensus 101 ~~~ll~~l~~~~~~~D~vI~D~~~~~---~~~~A----~~lgIP~v~~ 141 (471)
+.++++++. .+||+|++|.+... ...+| -.+++|+|-+
T Consensus 93 ~l~al~~L~---~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 93 FLKAWEKLR---TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHTTCC---SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHhcC---CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 344456665 36999999987633 33344 4458999996
No 250
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=29.46 E-value=89 Score=27.16 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=28.7
Q ss_pred CcEEEEEcCCC----------cc-ChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPG----------RG-HINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~----------~G-H~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+||+|+.... .| ...=+....+.|.+ .|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~--ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK--EGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH--CCCEEEEECCCC
Confidence 56888887642 12 44567777788999 999999999754
No 251
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=29.31 E-value=47 Score=27.69 Aligned_cols=37 Identities=11% Similarity=0.295 Sum_probs=29.8
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGR---GHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~---GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+|+|+|+.+. =-..+.-.|++.|.+ +|.+|.|..++
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~--~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKK--EGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHH--cCCeEEEEecc
Confidence 37888887543 245678899999999 99999999986
No 252
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.10 E-value=3.2e+02 Score=24.54 Aligned_cols=108 Identities=10% Similarity=0.135 Sum_probs=61.4
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc--cchhhhcCCCCCCCCeEEEecCCCCCCchhhhhc
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE--EWLSFIGSGHGNHNNIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~ 85 (471)
...+++||+++.++. || -+.+|..+..+-.-..+|.++.+. ......++. ++.+..+|.... . +
T Consensus 91 ~~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~-----gIp~~~~~~~~~-~--r--- 156 (292)
T 3lou_A 91 DVAARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH-----GLPFRHFPITAD-T--K--- 156 (292)
T ss_dssp ETTSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT-----TCCEEECCCCSS-C--H---
T ss_pred ccCCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc-----CCCEEEeCCCcC-C--H---
Confidence 345577998888776 55 355555555541124677777754 233444445 788888774321 0 0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
...++.+.+++++. ++|+||+-.+. .-...+-..+.-.++-+++
T Consensus 157 ---------~~~~~~~~~~l~~~-----~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 157 ---------AQQEAQWLDVFETS-----GAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp ---------HHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ---------HHHHHHHHHHHHHh-----CCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 01122344455554 59999988775 4444455556556666544
No 253
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=29.10 E-value=71 Score=28.92 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=46.6
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHH
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTL 364 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~ 364 (471)
.|.++--|-.....+.+..+...|+..+..+.+.......... ..+.+ +....++ +|.-||=||+.
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~----------~~~~~--~~~~~d~--vv~~GGDGTl~ 77 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDAT----------KYCQE--FASKVDL--IIVFGGDGTVF 77 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHH----------HHHHH--HTTTCSE--EEEEECHHHHH
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHH----------HHHHH--hhcCCCE--EEEEccchHHH
Confidence 4555544333333455666777888777776554432221110 00111 1123344 99999999999
Q ss_pred HHHH------cCCceecccc
Q 012096 365 EAAY------AGVPMLTFPI 378 (471)
Q Consensus 365 eal~------~GvP~v~~P~ 378 (471)
|++. .++|+.++|.
T Consensus 78 ~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 78 ECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHhhCCCCCcEEEecC
Confidence 9864 5789999997
No 254
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=29.00 E-value=19 Score=31.87 Aligned_cols=39 Identities=21% Similarity=0.100 Sum_probs=25.4
Q ss_pred ccccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcE-EEEEEC
Q 012096 5 RMKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVF-ITFVVT 50 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~-Vt~~~~ 50 (471)
.|+...++|+|+|+..+..| ..+++.|.+ .||+ |+++..
T Consensus 3 ~m~~~~~~m~i~iiG~G~mG-----~~~a~~l~~--~g~~~v~~~~~ 42 (266)
T 3d1l_A 3 AMKRSIEDTPIVLIGAGNLA-----TNLAKALYR--KGFRIVQVYSR 42 (266)
T ss_dssp ----CGGGCCEEEECCSHHH-----HHHHHHHHH--HTCCEEEEECS
T ss_pred hhhcCCCCCeEEEEcCCHHH-----HHHHHHHHH--CCCeEEEEEeC
Confidence 46655556899999776555 456888999 8999 666543
No 255
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=28.99 E-value=31 Score=32.14 Aligned_cols=40 Identities=15% Similarity=-0.052 Sum_probs=27.8
Q ss_pred ccccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 5 RMKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|+....+++|+|+..+..| -++|+.|++ .||+|+.+...
T Consensus 1 ~m~~~~~~~kIgIIG~G~mG-----~slA~~L~~--~G~~V~~~dr~ 40 (341)
T 3ktd_A 1 GMTTKDISRPVCILGLGLIG-----GSLLRDLHA--ANHSVFGYNRS 40 (341)
T ss_dssp -----CCSSCEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSC
T ss_pred CCCccCCCCEEEEEeecHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 47777778899999765443 568999999 99999887654
No 256
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=28.99 E-value=3.1e+02 Score=24.47 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=59.7
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch---hhhcCCCCCCCCeEEEecCCCCCCchhhhh
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL---SFIGSGHGNHNNIRFETIPNVIPSELVRAR 84 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~ 84 (471)
...+++||+++.++. || -+.+|..+.++-.-..+|..+.+.... +..++. ++.+..+|.... .
T Consensus 84 ~~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~-----gIp~~~~~~~~~---~--- 149 (287)
T 3nrb_A 84 PRTDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVG-----DIPFHYLPVTPA---T--- 149 (287)
T ss_dssp ETTCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCT-----TSCEEECCCCGG---G---
T ss_pred ccCCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHc-----CCCEEEEeccCc---c---
Confidence 345678999888876 54 344565555551123577777664322 222222 788877763210 0
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 85 DFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
....++.+.+++++. ++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 150 ---------r~~~~~~~~~~l~~~-----~~Dlivlagym~il~~~~l~~~~~~~iNiHp 195 (287)
T 3nrb_A 150 ---------KAAQESQIKNIVTQS-----QADLIVLARYMQILSDDLSAFLSGRCINIHH 195 (287)
T ss_dssp ---------HHHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred ---------hhhHHHHHHHHHHHh-----CCCEEEhhhhhhhcCHHHHhhccCCeEEECc
Confidence 011122344455554 59999988776 4444555556556666544
No 257
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=28.96 E-value=1.1e+02 Score=27.06 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=25.2
Q ss_pred EEEEEcCCC--ccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 14 HIVALPYPG--RGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 14 ~il~~~~~~--~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|.+++++++ .| --.++|+.|.+ +|++|.+..-..
T Consensus 27 k~vlVTGasg~~G---IG~~ia~~l~~--~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKS---IAYGIAKAMHR--EGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTC---HHHHHHHHHHH--TTCEEEEEECTT
T ss_pred CEEEEECCCCCCC---HHHHHHHHHHH--cCCEEEEeeCch
Confidence 567777754 22 24789999999 999998887654
No 258
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.95 E-value=3.1e+02 Score=24.46 Aligned_cols=108 Identities=10% Similarity=0.057 Sum_probs=61.0
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc--cchhhhcCCCCCCCCeEEEecCCCCCCchhhhhc
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE--EWLSFIGSGHGNHNNIRFETIPNVIPSELVRARD 85 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~--~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~ 85 (471)
.+.+++||+++.++. || -+.+|..+-.+-.-..+|..+.+. ......++. ++.+..+|.... + +
T Consensus 86 ~~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~-----gIp~~~~~~~~~-~--r--- 151 (286)
T 3n0v_A 86 APNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH-----KIPYYHFALDPK-D--K--- 151 (286)
T ss_dssp CTTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT-----TCCEEECCCBTT-B--H---
T ss_pred cCCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc-----CCCEEEeCCCcC-C--H---
Confidence 345577998888876 54 344555555441124677777654 233444444 788887774321 0 0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEec
Q 012096 86 FLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~ 143 (471)
...++.+.+++++. ++|+||+-.+. .-...+-+.+.-.++-+++
T Consensus 152 ---------~~~~~~~~~~l~~~-----~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 196 (286)
T 3n0v_A 152 ---------PGQERKVLQVIEET-----GAELVILARYMQVLSPELCRRLDGWAINIHH 196 (286)
T ss_dssp ---------HHHHHHHHHHHHHH-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ---------HHHHHHHHHHHHhc-----CCCEEEecccccccCHHHHhhhcCCeEEecc
Confidence 11122344555554 59999988775 4444455556556666544
No 259
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=28.92 E-value=51 Score=28.98 Aligned_cols=37 Identities=22% Similarity=0.113 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+.|+|..-++.|=..-...||..|++ +|++|.++=.
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~--~G~~VlliD~ 37 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHA--MGKTIMVVGC 37 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHT--TTCCEEEEEE
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHH--CCCcEEEEcC
Confidence 345777666788999999999999999 9999998754
No 260
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=28.86 E-value=48 Score=27.72 Aligned_cols=37 Identities=22% Similarity=0.295 Sum_probs=29.9
Q ss_pred cEEEEEcCCCc---cChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGR---GHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~---GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+|+|+|+.+. =-..+.-.|++.|.+ +|.+|.|...+
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~--~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTE--QGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHH--CCCeEEEEeCc
Confidence 37888887543 245678899999999 99999999986
No 261
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=28.85 E-value=21 Score=34.95 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
|+||+|+..+-.| |.-|..|++ +|++|+++=
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~--~G~~V~VlE 31 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQA--AGIPVLLLE 31 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHH--TTCCEEEEC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHH--CCCcEEEEc
Confidence 6778888776444 677889999 999999863
No 262
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=28.77 E-value=67 Score=28.93 Aligned_cols=39 Identities=13% Similarity=-0.028 Sum_probs=23.9
Q ss_pred ccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 7 KATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 7 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
....++++|++.... |- --..|++.|.+ +||+|+.+.-.
T Consensus 7 ~~~~~~~~vlVTGat--G~--iG~~l~~~L~~--~G~~V~~~~r~ 45 (321)
T 2pk3_A 7 HHHHGSMRALITGVA--GF--VGKYLANHLTE--QNVEVFGTSRN 45 (321)
T ss_dssp ------CEEEEETTT--SH--HHHHHHHHHHH--TTCEEEEEESC
T ss_pred ccccCcceEEEECCC--Ch--HHHHHHHHHHH--CCCEEEEEecC
Confidence 445666777766443 32 24678999999 99999998754
No 263
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=28.66 E-value=38 Score=30.15 Aligned_cols=32 Identities=13% Similarity=-0.048 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|+..+..| ..+|..|.+ .||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~--~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCK--QGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHh--CCCCEEEEEcC
Confidence 478888776655 478999999 99999998654
No 264
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=28.57 E-value=3e+02 Score=24.11 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=25.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|.+ +|++|.++..
T Consensus 30 k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~~ 61 (280)
T 4da9_A 30 PVAIVTGGRRG---IGLGIARALAA--SGFDIAITGI 61 (280)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEES
T ss_pred CEEEEecCCCH---HHHHHHHHHHH--CCCeEEEEeC
Confidence 57777777653 45789999999 9999998874
No 265
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=28.52 E-value=2.8e+02 Score=23.77 Aligned_cols=33 Identities=6% Similarity=0.058 Sum_probs=24.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 8 k~~lVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGASSG---LGAAVTRMLAQ--EGATVLGLDLK 40 (257)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEeCCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 56677776643 35789999999 99999887643
No 266
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=28.48 E-value=73 Score=29.78 Aligned_cols=34 Identities=6% Similarity=-0.118 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+||+++..+ .....++++|++ .|++|.++.+..
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~--~G~~v~~~~~~~ 34 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKK--MGFYVIVLDPTP 34 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHH--TTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 4589998764 245778899999 999999888753
No 267
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=28.39 E-value=37 Score=30.00 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=32.8
Q ss_pred CCCcEEEEEcCCC---ccChHHHHHHHHHHHhcCCCcEEEEEECccch
Q 012096 10 GRMCHIVALPYPG---RGHINPMMNLCKLLVSRNPNVFITFVVTEEWL 54 (471)
Q Consensus 10 ~~~~~il~~~~~~---~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~ 54 (471)
-.+||++|++++- .|-=.-.-+|+..|+. ||++||..=-.++.
T Consensus 20 ~~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~--rG~~Vt~~KiDPYl 65 (294)
T 2c5m_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKS--CGLHVTSIKIDPYI 65 (294)
T ss_dssp -CCCEEEEEEECSSTTSCHHHHHHHHHHHHHT--TTCCEECCEEECBC
T ss_pred eeceEEEEEcCccccccchHHHHHHHHHHHHH--CCCeeEEEecCCce
Confidence 4557999999874 3555667899999999 99999987655444
No 268
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=28.36 E-value=58 Score=30.23 Aligned_cols=34 Identities=9% Similarity=-0.224 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|++|+++..+ .-...+++++++ .||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~--~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRK--LGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGG--GTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 4689888654 446788999999 999999887643
No 269
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=28.09 E-value=80 Score=27.90 Aligned_cols=32 Identities=6% Similarity=0.024 Sum_probs=26.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|++ +|++|.+..-
T Consensus 12 K~alVTGas~G---IG~aia~~la~--~Ga~V~~~~r 43 (261)
T 4h15_A 12 KRALITAGTKG---AGAATVSLFLE--LGAQVLTTAR 43 (261)
T ss_dssp CEEEESCCSSH---HHHHHHHHHHH--TTCEEEEEES
T ss_pred CEEEEeccCcH---HHHHHHHHHHH--cCCEEEEEEC
Confidence 78899988875 46789999999 9999988664
No 270
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=27.95 E-value=54 Score=27.87 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=21.1
Q ss_pred CCcEEEEEcCCCc-cChHHHH----HHHHHHHhcCCCcEEEEEE
Q 012096 11 RMCHIVALPYPGR-GHINPMM----NLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 11 ~~~~il~~~~~~~-GH~~p~l----~La~~L~~~~rGh~Vt~~~ 49 (471)
.||||+++....+ |.-.-.. .+++.|.+.+.||+|+++-
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~d 46 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELD 46 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 3678877766544 2222222 3456666622288888754
No 271
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=27.46 E-value=53 Score=30.24 Aligned_cols=41 Identities=15% Similarity=0.068 Sum_probs=26.5
Q ss_pred ccccCCCCcEEEEEcCCCccChHHHHHHHHHHH-hcCCCcEEEEEECc
Q 012096 5 RMKATGRMCHIVALPYPGRGHINPMMNLCKLLV-SRNPNVFITFVVTE 51 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~-~~~rGh~Vt~~~~~ 51 (471)
+|++.++|+||+|+..+..|+ ..++.|. + ..|++|+.++..
T Consensus 1 ~m~~~~~~~~v~iiG~G~ig~-----~~~~~l~~~-~~~~~~vav~d~ 42 (346)
T 3cea_A 1 GMVTTRKPLRAAIIGLGRLGE-----RHARHLVNK-IQGVKLVAACAL 42 (346)
T ss_dssp ----CCCCEEEEEECCSTTHH-----HHHHHHHHT-CSSEEEEEEECS
T ss_pred CCCCCCCcceEEEEcCCHHHH-----HHHHHHHhc-CCCcEEEEEecC
Confidence 477778899999999877764 3455666 3 158887766654
No 272
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.28 E-value=40 Score=28.41 Aligned_cols=29 Identities=3% Similarity=0.273 Sum_probs=22.8
Q ss_pred ccceeeccCCcchHHHHHHcCCceeccccc
Q 012096 350 SIGGFWTHCGLNSTLEAAYAGVPMLTFPIM 379 (471)
Q Consensus 350 ~~~~~IthgG~~s~~eal~~GvP~v~~P~~ 379 (471)
.+..+|+.||........ ..+|+|-++..
T Consensus 51 ~~dVIISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 51 EVDAIISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp TCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCeEEEECChHHHHHHHh-CCCCEEEEcCC
Confidence 334499999988888865 57999998875
No 273
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=27.25 E-value=59 Score=31.81 Aligned_cols=37 Identities=14% Similarity=0.018 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCC-Cc-EEEEEECccc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNP-NV-FITFVVTEEW 53 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh-~Vt~~~~~~~ 53 (471)
.++|||+|+..+..| +.+|..|++ . || +|+++-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~--~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFAD--APCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHH--STTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHH--hCCCCeEEEEECChh
Confidence 456899999888877 578999999 9 99 9999876543
No 274
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=27.23 E-value=75 Score=24.10 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=21.5
Q ss_pred CceEEEEcCchh--hHHHHHhh-------cCCCeEEEecchH
Q 012096 114 VVSAIIVDTFLA--WAVDVGNR-------RNIPVASFWSMSA 146 (471)
Q Consensus 114 ~~D~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~~ 146 (471)
.||+||+|...+ .+..+.+. .++|++.++....
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 699999997652 34444332 2689888776543
No 275
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=27.20 E-value=46 Score=29.02 Aligned_cols=39 Identities=13% Similarity=-0.009 Sum_probs=27.0
Q ss_pred ccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 7 KATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 7 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
..+..++||+|+..+..| .++|+.|.+ .||+|+++....
T Consensus 14 ~~~~~~~kIgiIG~G~mG-----~alA~~L~~--~G~~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVG-----RTMAGALAD--LGHEVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEEESCH
T ss_pred ccccCCCeEEEECCCHHH-----HHHHHHHHH--CCCEEEEEeCCh
Confidence 344556899999766544 567999999 999999986543
No 276
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=27.14 E-value=51 Score=28.11 Aligned_cols=31 Identities=19% Similarity=0.219 Sum_probs=23.6
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
.||+|| +|... .-++.=|.++|||+|.++-+
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 147 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCDS 147 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEECT
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeCC
Confidence 599886 56555 55667789999999998654
No 277
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=26.81 E-value=61 Score=27.87 Aligned_cols=40 Identities=8% Similarity=-0.033 Sum_probs=22.5
Q ss_pred CCCcEEEEEcCCCc-----cChHHHH-HHHHHHHhcCCCc-EEEEEE
Q 012096 10 GRMCHIVALPYPGR-----GHINPMM-NLCKLLVSRNPNV-FITFVV 49 (471)
Q Consensus 10 ~~~~~il~~~~~~~-----GH~~p~l-~La~~L~~~~rGh-~Vt~~~ 49 (471)
++||||+++...-+ |...-+. .+++.|.+++.|| +|+++-
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~id 48 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQIN 48 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 56889877766543 3333332 3455666632368 888754
No 278
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=26.79 E-value=77 Score=28.70 Aligned_cols=44 Identities=11% Similarity=0.233 Sum_probs=28.4
Q ss_pred ccccCCCCcEEEEEcCCCcc--Ch-HHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 5 RMKATGRMCHIVALPYPGRG--HI-NPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~~~G--H~-~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|+ +.+|+|++++..|..| .. .-.-.+.+.|.+ +|+++.+..+.
T Consensus 2 ~m~-~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~--~~~~~~~~~t~ 48 (304)
T 3s40_A 2 HMT-KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAA--AFPDLHILHTK 48 (304)
T ss_dssp ----CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHH--HCSEEEEEECC
T ss_pred CCc-cCCCCEEEEEECcccCCCchHHHHHHHHHHHHH--cCCeEEEEEcc
Confidence 355 4557788888777554 33 234466788888 89999887654
No 279
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=26.76 E-value=39 Score=33.28 Aligned_cols=35 Identities=6% Similarity=0.058 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
++.||+|+..+.-| +.+|+.|++ .|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~--~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDT--KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCT--TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhh--CCCcEEEECCCC
Confidence 34689999877544 678999998 999999998754
No 280
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=26.64 E-value=69 Score=27.61 Aligned_cols=37 Identities=11% Similarity=0.018 Sum_probs=28.8
Q ss_pred CCcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 11 RMCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 11 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
+|..|+|... .+.|=..-...|++.|++ +|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~--~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEH--QNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHH--TTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHH--CCCeeEEec
Confidence 4444544444 466899999999999999 999999974
No 281
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.59 E-value=1.8e+02 Score=22.74 Aligned_cols=46 Identities=9% Similarity=0.110 Sum_probs=31.4
Q ss_pred cEE-EEEcCCCccChH--HHHHHHHHHHhcCCCcEE-EEEECccchhhhcCC
Q 012096 13 CHI-VALPYPGRGHIN--PMMNLCKLLVSRNPNVFI-TFVVTEEWLSFIGSG 60 (471)
Q Consensus 13 ~~i-l~~~~~~~GH~~--p~l~La~~L~~~~rGh~V-t~~~~~~~~~~~~~~ 60 (471)
||+ +++..+-.|+-. -.+.+|+++.+ .||+| .++-..+......+.
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala--~g~eV~~VFf~~DGV~~a~~~ 62 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIA--DGHELSSVFFYREGVYNANQL 62 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHH--TTCEEEEEEECGGGGGGGBTT
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHH--CCCccCEEEEechHHHHHhcC
Confidence 344 444555556444 46778999999 99999 888887766655543
No 282
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.55 E-value=1.4e+02 Score=27.41 Aligned_cols=81 Identities=11% Similarity=-0.015 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcc
Q 012096 282 DSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLN 361 (471)
Q Consensus 282 ~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~ 361 (471)
.+-.|+++--+... +.+..+...+.+.+..+.+............ -...+...+++ +|.-||=|
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~-----------~~~~~~~~~d~--vvv~GGDG 93 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAARY-----------VEEARKFGVAT--VIAGGGDG 93 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHHH-----------HHHHHHHTCSE--EEEEESHH
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHHH-----------HHHHHhcCCCE--EEEEccch
Q ss_pred hHHHHH--------HcCCceecccc
Q 012096 362 STLEAA--------YAGVPMLTFPI 378 (471)
Q Consensus 362 s~~eal--------~~GvP~v~~P~ 378 (471)
|+.|++ ..++|+.++|.
T Consensus 94 Tl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 94 TINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHHHHHhhcccCCCCeEEEecC
No 283
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=26.48 E-value=86 Score=26.85 Aligned_cols=40 Identities=18% Similarity=0.225 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCccC----hHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGH----INPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH----~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|.+|.++|+...+- ..-...|++.|++ +|+.|+.-...
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~--~G~~vVsGGg~ 54 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVS--RNIDLVYGGGS 54 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHH--TTCEEEECCCS
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHH--CCCEEEECCCh
Confidence 4566799998776653 2346788999999 99988775544
No 284
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=26.48 E-value=44 Score=28.10 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=22.0
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
||||+++.. |-.+.-.-.-++++.+++ .|++|+++--
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~--~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQ--HTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTT--CTTTEEEEEH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHh--CCCeEEEEEc
Confidence 567766554 433322345566777777 7888887653
No 285
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=26.48 E-value=78 Score=27.42 Aligned_cols=29 Identities=28% Similarity=0.297 Sum_probs=23.5
Q ss_pred CCCcEEEEEcCCCcc--ChHHHHHHHHHHHh
Q 012096 10 GRMCHIVALPYPGRG--HINPMMNLCKLLVS 38 (471)
Q Consensus 10 ~~~~~il~~~~~~~G--H~~p~l~La~~L~~ 38 (471)
++|++|++..|.-.| -+||...++++|.+
T Consensus 21 ~~mk~VLvTGF~PF~g~~~NPS~~~v~~L~~ 51 (228)
T 4hps_A 21 QSMKTILVTAFDPFGGEAINPSWEAIKPLQG 51 (228)
T ss_dssp CCCEEEEEEEECCCTTCSCCHHHHHHGGGTT
T ss_pred CCCCEEEEEeccCCCCCCCChHHHHHHHhcC
Confidence 447899988886444 57999999999988
No 286
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=26.29 E-value=22 Score=30.40 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|||+++..+. -...+|+.|.+ +||+|+++....
T Consensus 1 M~iiIiG~G~-----~G~~la~~L~~--~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGET-----TAYYLARSMLS--RKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHH-----HHHHHHHHHHH--TTCCEEEEESCH
T ss_pred CEEEEECCCH-----HHHHHHHHHHh--CCCeEEEEECCH
Confidence 4677776532 34678999999 999999988643
No 287
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.28 E-value=1.3e+02 Score=26.41 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=24.4
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-
T Consensus 12 k~~lVTGas~G---IG~a~a~~la~--~G~~V~~~~r 43 (277)
T 3tsc_A 12 RVAFITGAARG---QGRAHAVRMAA--EGADIIAVDI 43 (277)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CEEEEECCccH---HHHHHHHHHHH--cCCEEEEEec
Confidence 56667776643 35788999999 9999998754
No 288
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=26.28 E-value=44 Score=30.58 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCC-cEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPN-VFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rG-h~Vt~~~~~ 51 (471)
+|+|+|+..+..| ..+|+.|.+ .| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~--~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGG--RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHT--TTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHH--cCCCeEEEEeCC
Confidence 4789999877666 788999999 99 999987653
No 289
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=26.21 E-value=31 Score=26.68 Aligned_cols=34 Identities=12% Similarity=-0.028 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|.+|+++..+..| ..+++.|.+ .|++|+++...
T Consensus 5 ~~~~v~I~G~G~iG-----~~~a~~l~~--~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFG-----GSIVKELHR--MGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHH--TTCCCEEEESC
T ss_pred cCCcEEEECCCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 34578888754333 567899999 99999988754
No 290
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=26.10 E-value=60 Score=25.02 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=21.1
Q ss_pred CceEEEEcCch--hhHHHHHhhc---------CCCeEEEecch
Q 012096 114 VVSAIIVDTFL--AWAVDVGNRR---------NIPVASFWSMS 145 (471)
Q Consensus 114 ~~D~vI~D~~~--~~~~~~A~~l---------gIP~v~~~~~~ 145 (471)
+||+||.|... ..+..+.+.+ .+|+++++...
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 69999999765 2344444433 37888876644
No 291
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.09 E-value=59 Score=28.83 Aligned_cols=35 Identities=6% Similarity=-0.028 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 20 ~~k~vlVTGas~g---IG~aia~~La~--~G~~V~~~~r~ 54 (272)
T 2nwq_A 20 MSSTLFITGATSG---FGEACARRFAE--AGWSLVLTGRR 54 (272)
T ss_dssp -CCEEEESSTTTS---SHHHHHHHHHH--TTCEEEEEESC
T ss_pred cCcEEEEeCCCCH---HHHHHHHHHHH--CCCEEEEEECC
Confidence 3367788877654 25689999999 99999987653
No 292
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.05 E-value=1e+02 Score=27.67 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=23.4
Q ss_pred CCCcEEEEE-cCCCccChHHHH--HHHHHHHhcCCCcEEEEEE
Q 012096 10 GRMCHIVAL-PYPGRGHINPMM--NLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 10 ~~~~~il~~-~~~~~GH~~p~l--~La~~L~~~~rGh~Vt~~~ 49 (471)
++.|||||+ +.|-..-++-.+ .+.+.|.+ .||+|++.-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~--~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQ--AGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHH--TTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHH--CCCeEEEEE
Confidence 444676554 456554444433 45688889 999999863
No 293
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.99 E-value=35 Score=30.32 Aligned_cols=34 Identities=12% Similarity=0.031 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
||||+|.. + |.+ -..|++.|.+ +||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~i--G~~l~~~L~~--~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYT--ARVLSRALAP--QGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHH--HHHHHHHHGG--GTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHH--HHHHHHHHHH--CCCEEEEEEcCh
Confidence 46777775 4 544 3578899999 999999998653
No 294
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=25.95 E-value=1.5e+02 Score=24.52 Aligned_cols=143 Identities=11% Similarity=0.107 Sum_probs=72.9
Q ss_pred eEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcc--
Q 012096 284 SVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLN-- 361 (471)
Q Consensus 284 ~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~-- 361 (471)
|.|-|-+||.+ +....+++...++.++..+=..+-+- .+.|+.. ..|..+ ...-.++.+|.=+|..
T Consensus 14 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~Sa-----HR~p~~l--~~~~~~---a~~~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 14 PRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSA-----HRTPDRM--FEYAKN---AEERGIEVIIAGAGGAAH 81 (183)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCT-----TTCHHHH--HHHHHH---TTTTTCCEEEEEEESSCC
T ss_pred CeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcc-----cCCHHHH--HHHHHH---HHhCCCcEEEEecCcccc
Confidence 46777788777 35667778888888887754444321 1111110 111110 0111233488876653
Q ss_pred --hHHHHHHcCCceeccccccc--ccchhh--hhhhhhcceee-eecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHHH
Q 012096 362 --STLEAAYAGVPMLTFPIMMD--QVPNSK--LIVEDWKIGWK-VKKPEIGSESLVTRDEITELVKRFMDLNNDERKAMS 434 (471)
Q Consensus 362 --s~~eal~~GvP~v~~P~~~D--Q~~na~--~v~~~lG~G~~-l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~ 434 (471)
++..++ .-+|+|.+|.... ....+- .++---|+.+. +.+ + +-.++..++..|- -+.| +.++
T Consensus 82 LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I-d----~~~nAa~lAaqIl-a~~d-----~~l~ 149 (183)
T 1o4v_A 82 LPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAI-N----NAKNAGILAASIL-GIKY-----PEIA 149 (183)
T ss_dssp HHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCT-T----CHHHHHHHHHHHH-HTTC-----HHHH
T ss_pred cHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEec-C----CchHHHHHHHHHH-hcCC-----HHHH
Confidence 444443 6789999998553 111111 11100032221 222 1 2235555555443 2344 7888
Q ss_pred HHHHHHHHHHHHhHhc
Q 012096 435 KRAREVQEICQEAVAE 450 (471)
Q Consensus 435 ~~a~~l~~~~~~~~~~ 450 (471)
++.+..+..+++.+.+
T Consensus 150 ~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 150 RKVKEYKERMKREVLE 165 (183)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888887775443
No 295
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=25.83 E-value=85 Score=28.89 Aligned_cols=81 Identities=6% Similarity=-0.070 Sum_probs=46.2
Q ss_pred EEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHH
Q 012096 285 VLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTL 364 (471)
Q Consensus 285 ~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~ 364 (471)
.|+++-.|........+..+...|+..+..+.+.......... .. -.......+++ +|.=||=||+.
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~----------~~-~~~~~~~~~d~--vvv~GGDGTv~ 94 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDAT----------LE-AERAMHENYDV--LIAAGGDGTLN 94 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHH----------HH-HHHHTTTTCSE--EEEEECHHHHH
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHH----------HH-HHHHhhcCCCE--EEEEcCchHHH
Confidence 3555544433333355667888888877665544322111110 00 11111223445 99999999999
Q ss_pred HHHH------cCCceecccc
Q 012096 365 EAAY------AGVPMLTFPI 378 (471)
Q Consensus 365 eal~------~GvP~v~~P~ 378 (471)
|++. .++|+.++|.
T Consensus 95 ~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 95 EVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHHhCCCCCcEEEecC
Confidence 9863 4689999997
No 296
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=25.68 E-value=60 Score=29.71 Aligned_cols=37 Identities=8% Similarity=-0.095 Sum_probs=23.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
..++++|+|.... |. --..|++.|.+ +||+|+.+.-.
T Consensus 16 ~~~~~~vlVtGat--G~--iG~~l~~~L~~--~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGSA--GR--VGRAVVAALRT--QGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEETTT--SH--HHHHHHHHHHH--TTCCEEEEESS
T ss_pred ccCCCEEEEECCC--Ch--HHHHHHHHHHh--CCCEEEEEeCC
Confidence 3445667666443 32 34578899999 99999998754
No 297
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=25.60 E-value=55 Score=28.79 Aligned_cols=32 Identities=9% Similarity=0.125 Sum_probs=24.2
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecch
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSMS 145 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~~ 145 (471)
.||+|| +|... .-++.=|.++|||+|.++-+.
T Consensus 151 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 184 (253)
T 3bch_A 151 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 184 (253)
T ss_dssp SCSEEEESCTTTTHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCEEEEECCCccchHHHHHHHhCCCEEEEEcCC
Confidence 599887 56655 556677999999999986543
No 298
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=25.57 E-value=82 Score=24.35 Aligned_cols=34 Identities=9% Similarity=0.016 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCccChH--------HHHHHHHHHHhcCCCcEEE
Q 012096 11 RMCHIVALPYPGRGHIN--------PMMNLCKLLVSRNPNVFIT 46 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~--------p~l~La~~L~~~~rGh~Vt 46 (471)
.+|+.+++++|-.|... -+-..|..|.+ +||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~--~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVR--AGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHH--TTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHH--CCCeee
Confidence 45677888888777632 23445666888 899554
No 299
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=25.50 E-value=91 Score=25.99 Aligned_cols=34 Identities=12% Similarity=0.025 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|||+|.... |.+ -..|+++|.+ +||+|+.++-..
T Consensus 1 MkvlVtGat--G~i--G~~l~~~L~~--~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGAT--GRA--GSRILEEAKN--RGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHH--TTCEEEEEESCS
T ss_pred CeEEEEcCC--chh--HHHHHHHHHh--CCCEEEEEEcCc
Confidence 466665432 322 3688999999 999999988643
No 300
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=25.35 E-value=51 Score=28.51 Aligned_cols=28 Identities=11% Similarity=0.112 Sum_probs=22.7
Q ss_pred cccceeeccCCcchHHHHHHcCCceeccccc
Q 012096 349 SSIGGFWTHCGLNSTLEAAYAGVPMLTFPIM 379 (471)
Q Consensus 349 ~~~~~~IthgG~~s~~eal~~GvP~v~~P~~ 379 (471)
+++ +|+.||...+.... ..+|+|-++..
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 455 99999988888875 57999998874
No 301
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=25.09 E-value=39 Score=28.83 Aligned_cols=34 Identities=12% Similarity=-0.006 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|+|+|+..+..| ..+++.|.+ .||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~--~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVG--SGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESS
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 46789999655433 467889999 99999987653
No 302
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=25.08 E-value=35 Score=31.52 Aligned_cols=36 Identities=8% Similarity=-0.049 Sum_probs=26.2
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCc-EEEEEECc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNV-FITFVVTE 51 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh-~Vt~~~~~ 51 (471)
.+++|||.++..+..|.. +|..|+. .|| +|+++-..
T Consensus 6 ~~~~~kI~VIGaG~vG~~-----lA~~la~--~g~~~V~L~D~~ 42 (331)
T 1pzg_A 6 VQRRKKVAMIGSGMIGGT-----MGYLCAL--RELADVVLYDVV 42 (331)
T ss_dssp CSCCCEEEEECCSHHHHH-----HHHHHHH--HTCCEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHH-----HHHHHHh--CCCCeEEEEECC
Confidence 344579999976554433 8889999 899 98887654
No 303
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=25.02 E-value=35 Score=32.73 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=26.1
Q ss_pred cccCCCC-cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 6 MKATGRM-CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 6 ~~~~~~~-~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+..++| .+|+|+..+-- -+.+|..|++ +|++|+++-...
T Consensus 15 ~~~~~~m~~~ViIVGaGpa-----Gl~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 15 VPRGSHMKKRIGIVGAGTA-----GLHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp --------CEEEEECCHHH-----HHHHHHHHHH--TTCEEEEEESCC
T ss_pred ecccCcCCCCEEEECCcHH-----HHHHHHHHHH--CCCeEEEEcCCC
Confidence 5555556 47888877643 3788999999 999999997543
No 304
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=25.00 E-value=33 Score=33.87 Aligned_cols=39 Identities=10% Similarity=0.156 Sum_probs=27.2
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+..++..+|+|+..+..| +.+|..|++ +|++|+++=..
T Consensus 1 M~~~~~~~dVvIVGgG~aG-----l~aA~~La~--~G~~V~liE~~ 39 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGG-----STLASFVAM--RGHRVLLLERE 39 (512)
T ss_dssp ----CEEEEEEEECCSHHH-----HHHHHHHHT--TTCCEEEECSS
T ss_pred CCCCCccCCEEEECcCHHH-----HHHHHHHHh--CCCCEEEEccC
Confidence 3333344689998887655 778889999 99999998543
No 305
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.99 E-value=52 Score=28.49 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=32.3
Q ss_pred hHHHHHHHHHhhhcCCCceEEEEcCchhhHHHHHhhcCCCeEEEec
Q 012096 98 EAPFEKVLDFLQVEAPVVSAIIVDTFLAWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 98 ~~~~~~ll~~l~~~~~~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~ 143 (471)
...+++.+++++++ ++|+||.+.. ...+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 34567788888775 7999999843 46789999999999874
No 306
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=24.97 E-value=71 Score=28.78 Aligned_cols=40 Identities=10% Similarity=-0.034 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++++.|+|..-++.|=..-...||..|++ +|++|.++=..
T Consensus 39 ~~~~vI~v~~KGGvGKTT~a~nLA~~La~--~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVYGKGGIGKSTTSSNLSAAFSI--LGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHH--TTCCEEEEEES
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 34456677766788999999999999999 99999998644
No 307
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=24.96 E-value=1.4e+02 Score=22.08 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=23.9
Q ss_pred cCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHhHhcCC
Q 012096 410 VTRDEITELVKRFMDLNNDERKAMSKRAREVQEICQEAVAENG 452 (471)
Q Consensus 410 ~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~l~~~~~~~~~~~g 452 (471)
++++++.+...++ ...+.+++-|.+++... ..|+
T Consensus 3 ~~~eq~~k~~~el--------~~v~~n~~lL~EML~~~-~p~~ 36 (103)
T 1wrd_A 3 LGSEQIGKLRSEL--------EMVSGNVRVMSEMLTEL-VPTQ 36 (103)
T ss_dssp SSSTTHHHHHHHH--------HHHHHHHHHHHHHHHHS-CTTT
T ss_pred CCHHHHHHHHHHH--------HHHHHHHHHHHHHHHhc-CCCC
Confidence 5777777666555 67888888888888763 4443
No 308
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=24.85 E-value=95 Score=22.80 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=21.6
Q ss_pred CceEEEEcCchh--hHHHHHh----hcCCCeEEEecchH
Q 012096 114 VVSAIIVDTFLA--WAVDVGN----RRNIPVASFWSMSA 146 (471)
Q Consensus 114 ~~D~vI~D~~~~--~~~~~A~----~lgIP~v~~~~~~~ 146 (471)
+||+||.|...+ .+..+.+ ..++|++.++....
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 699999997652 3333333 34789888766543
No 309
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=24.82 E-value=26 Score=34.24 Aligned_cols=33 Identities=30% Similarity=0.228 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|||+++..+-.| ..||+.|.+ .||+|+++=..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~--~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVG--ENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCS--TTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHH--CCCCEEEEECC
Confidence 4689988887655 469999999 99999998654
No 310
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=24.80 E-value=66 Score=29.72 Aligned_cols=29 Identities=17% Similarity=0.204 Sum_probs=20.4
Q ss_pred CceEEEEcCch-hhHHHHHhhcCCCeEEEe
Q 012096 114 VVSAIIVDTFL-AWAVDVGNRRNIPVASFW 142 (471)
Q Consensus 114 ~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~ 142 (471)
+||+||+.... .....+.+.+|||+|.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 69999987543 223345677899999973
No 311
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=24.76 E-value=1.3e+02 Score=23.44 Aligned_cols=47 Identities=9% Similarity=0.066 Sum_probs=32.2
Q ss_pred CcEEEEEcC-CCccCh--HHHHHHHHHHHhcCCCcEEEEEECccchhhhcCC
Q 012096 12 MCHIVALPY-PGRGHI--NPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSG 60 (471)
Q Consensus 12 ~~~il~~~~-~~~GH~--~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~ 60 (471)
|.|++|+-. +-.|+. .-.+.+|.++.. .||+|.++-..+......+.
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a--~~~~v~Vff~~DGV~~~~~~ 54 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAA--FDQDVCVLFLDDGVYQLTRG 54 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGG--GCCEEEEEECGGGGGGGBSC
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHh--CCCCEEEEEEhHHHHHHhcC
Confidence 444544444 444654 446778999999 89999999988777666553
No 312
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=24.49 E-value=49 Score=30.41 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|+..+..| ..+|..|.+ .||+|+++...
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred CcEEEECcCHHH-----HHHHHHHHh--CCCeEEEEeCC
Confidence 589999888766 578899999 99999998764
No 313
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=24.42 E-value=71 Score=28.47 Aligned_cols=37 Identities=19% Similarity=0.105 Sum_probs=31.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+.|+|..-++.|=..-...||..|++ +|++|.++=.
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~--~G~rVlliD~ 38 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAE--MGKKVMIVGC 38 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHH--TTCCEEEEEE
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHH--CCCeEEEEec
Confidence 456777666788999999999999999 9999988754
No 314
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=24.32 E-value=27 Score=31.26 Aligned_cols=28 Identities=14% Similarity=0.116 Sum_probs=23.7
Q ss_pred cccceeeccCCcchHHHHHHc------CCceecccc
Q 012096 349 SSIGGFWTHCGLNSTLEAAYA------GVPMLTFPI 378 (471)
Q Consensus 349 ~~~~~~IthgG~~s~~eal~~------GvP~v~~P~ 378 (471)
+++ +|+=||=||+.+++.. ++|++++|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999775 889888875
No 315
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=24.28 E-value=1.5e+02 Score=24.21 Aligned_cols=40 Identities=10% Similarity=-0.067 Sum_probs=30.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
.+++||+|+.+++.. ..-+....+.|.+ .|++|+++++..
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~--ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEA--AGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHH--CCCEEEEEecCC
Confidence 345799999886543 4456667788999 899999999753
No 316
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=24.24 E-value=60 Score=28.37 Aligned_cols=35 Identities=23% Similarity=0.177 Sum_probs=28.3
Q ss_pred EEEEc-CCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 15 IVALP-YPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 15 il~~~-~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.|+. -++.|=..-...||..|++ +|++|.++=..
T Consensus 5 I~v~s~kgGvGKTt~a~~LA~~la~--~g~~VlliD~D 40 (263)
T 1hyq_A 5 ITVASGKGGTGKTTITANLGVALAQ--LGHDVTIVDAD 40 (263)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHh--CCCcEEEEECC
Confidence 44433 3677999999999999999 99999998754
No 317
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=24.19 E-value=64 Score=32.44 Aligned_cols=45 Identities=13% Similarity=0.057 Sum_probs=36.2
Q ss_pred cccCCCCcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 6 MKATGRMCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 6 ~~~~~~~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|.+..++.+|+|+++ ++.|=..-...||..|++ +|++|.++....
T Consensus 1 ~~~~~~~~~i~~~sgkGGvGKTT~a~~lA~~lA~--~G~rVLlvd~D~ 46 (589)
T 1ihu_A 1 MQFLQNIPPYLFFTGKGGVGKTSISCATAIRLAE--QGKRVLLVSTDP 46 (589)
T ss_dssp CGGGSSCCSEEEEECSTTSSHHHHHHHHHHHHHH--TTCCEEEEECCT
T ss_pred CCCCCCCCEEEEEeCCCcCHHHHHHHHHHHHHHH--CCCcEEEEECCC
Confidence 444455666766665 678999999999999999 999999998764
No 318
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.10 E-value=73 Score=28.55 Aligned_cols=32 Identities=13% Similarity=0.015 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+|||+|+..+..|. .+++.|.+ .||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLK--EGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHH--TTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHH--CCCeEEEEeC
Confidence 57999998776664 46888999 8999987754
No 319
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=24.09 E-value=1.7e+02 Score=21.91 Aligned_cols=49 Identities=10% Similarity=0.003 Sum_probs=27.5
Q ss_pred cCCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 369 AGVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 369 ~GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
..+|+|++--..|.......+. ..|+--.+.+ . ++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~-~~ga~~~l~K-P------~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIN-DAGIHQFLTK-P------WHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHH-HTTCCEEEES-S------CCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHH-hhchhhhccC-C------CCHHHHHHHHHHHHHH
Confidence 3567766644444333233333 3134233443 2 5999999999998854
No 320
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=24.02 E-value=41 Score=30.32 Aligned_cols=70 Identities=10% Similarity=0.015 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcchHHHHHHc----CCcee
Q 012096 299 VQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLNSTLEAAYA----GVPML 374 (471)
Q Consensus 299 ~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~s~~eal~~----GvP~v 374 (471)
..+..+.+.+.+.++.+.+.... ...+ ..++ . .......+-..+++ +|+=||=||+.+++.. ++|++
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~-~~~~--~~~~-~---~~~~~~~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~l 91 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQI-AHEL--QLKN-V---PTGTLAEIGQQADL--AVVVGGDGNMLGAARTLARYDINVI 91 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHH-HHHT--TCSS-C---CEECHHHHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEecch-hhhc--cccc-c---cccchhhcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEE
Confidence 44666788888888876653211 0000 0000 0 01122233445666 9999999999999843 78988
Q ss_pred ccc
Q 012096 375 TFP 377 (471)
Q Consensus 375 ~~P 377 (471)
+++
T Consensus 92 GI~ 94 (292)
T 2an1_A 92 GIN 94 (292)
T ss_dssp EBC
T ss_pred EEE
Confidence 887
No 321
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=24.00 E-value=2.5e+02 Score=25.29 Aligned_cols=32 Identities=13% Similarity=0.028 Sum_probs=25.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-
T Consensus 47 k~~lVTGas~G---IG~aia~~la~--~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAARG---QGRTHAVRLAQ--DGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH--CCCeEEEEec
Confidence 67888887754 45789999999 9999998754
No 322
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.99 E-value=1e+02 Score=25.84 Aligned_cols=33 Identities=15% Similarity=0.043 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|.... |.+ -..|+++|.+ +||+|+.++-.
T Consensus 1 MkilVtGat--G~i--G~~l~~~L~~--~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGAT--GRA--GSAIVAEARR--RGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTT--SHH--HHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEEcCC--CHH--HHHHHHHHHH--CCCEEEEEEec
Confidence 466655432 332 4688999999 99999998854
No 323
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=23.90 E-value=1.3e+02 Score=25.44 Aligned_cols=38 Identities=0% Similarity=-0.100 Sum_probs=28.1
Q ss_pred cEEEEEcCC---------CccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYP---------GRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~---------~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
+||+|+... ..-...=+....+.|.+ .|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~--ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQE--KGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHH--TTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHH--CCCeEEEECCCC
Confidence 588888772 11244567777889999 999999999754
No 324
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.82 E-value=68 Score=28.94 Aligned_cols=35 Identities=14% Similarity=-0.055 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
||+|+|+.. .|.+ -.+++++|.+ +||+|++++-..
T Consensus 4 ~~~ilVtGa--tG~i--G~~l~~~L~~--~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGG--TGYI--GKFMVRASLS--FSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETT--TSTT--HHHHHHHHHH--TTCCEEEEECCC
T ss_pred ccEEEEEcC--Cchh--HHHHHHHHHh--CCCcEEEEECCc
Confidence 456766643 3443 3468899999 999999987653
No 325
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=23.81 E-value=92 Score=27.21 Aligned_cols=42 Identities=7% Similarity=-0.051 Sum_probs=32.3
Q ss_pred ccccCCCC--cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 5 RMKATGRM--CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 5 ~~~~~~~~--~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
||.+..++ =|++++++++.| --.++|+.|++ .|.+|.+..-.
T Consensus 1 GM~f~~dlf~GK~alVTGas~G---IG~aia~~la~--~Ga~Vv~~~~~ 44 (242)
T 4b79_A 1 GMVFQHDIYAGQQVLVTGGSSG---IGAAIAMQFAE--LGAEVVALGLD 44 (242)
T ss_dssp -CCBCTTTTTTCEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCCCCCCCCCCEEEEeCCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 46666654 378999998876 46889999999 99999887643
No 326
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=23.76 E-value=38 Score=30.63 Aligned_cols=33 Identities=6% Similarity=-0.098 Sum_probs=26.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++||+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~--~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTE--WPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTT--STTCEEEECSS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHH--CCCeEEEEeCC
Confidence 3589999887766 468999999 99999988643
No 327
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=23.76 E-value=83 Score=26.91 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCC-cEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPN-VFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rG-h~Vt~~~~~ 51 (471)
|+.+++++.+ |- --.++++.|.+ +| |+|++++-.
T Consensus 23 mk~vlVtGat-G~--iG~~l~~~L~~--~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLILGAG-GQ--IARHVINQLAD--KQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEETTT-SH--HHHHHHHHHTT--CTTEEEEEEESS
T ss_pred ccEEEEEeCC-cH--HHHHHHHHHHh--CCCceEEEEEcC
Confidence 4444444433 22 34678999999 99 999988754
No 328
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.75 E-value=96 Score=28.26 Aligned_cols=37 Identities=16% Similarity=0.002 Sum_probs=24.3
Q ss_pred cCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 8 ATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 8 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+..++++|+|.... |- --..|++.|.+ +||+|+.+.-
T Consensus 23 ~~~~~~~vlVtGat--G~--iG~~l~~~L~~--~g~~V~~~~r 59 (343)
T 2b69_A 23 MEKDRKRILITGGA--GF--VGSHLTDKLMM--DGHEVTVVDN 59 (343)
T ss_dssp ----CCEEEEETTT--SH--HHHHHHHHHHH--TTCEEEEEEC
T ss_pred cccCCCEEEEEcCc--cH--HHHHHHHHHHH--CCCEEEEEeC
Confidence 33456777776543 32 24678899999 9999999874
No 329
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=23.56 E-value=87 Score=27.95 Aligned_cols=37 Identities=11% Similarity=-0.199 Sum_probs=27.4
Q ss_pred cEEEEEcCCCc-cChH---HHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGR-GHIN---PMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~-GH~~---p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+++..+.. -|-. ....++++|++ +||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~--~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLRE--GGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHH--TTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHH--CCCeEEEEecC
Confidence 58888876543 2333 44689999999 99999988765
No 330
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=23.55 E-value=1e+02 Score=28.06 Aligned_cols=33 Identities=9% Similarity=0.098 Sum_probs=24.8
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.+..-.
T Consensus 9 k~vlVTGas~g---IG~~la~~l~~--~G~~Vv~~~r~ 41 (319)
T 3ioy_A 9 RTAFVTGGANG---VGIGLVRQLLN--QGCKVAIADIR 41 (319)
T ss_dssp CEEEEETTTST---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEcCCchH---HHHHHHHHHHH--CCCEEEEEECC
Confidence 56677776644 35689999999 99999887654
No 331
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=23.54 E-value=1.8e+02 Score=25.14 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=24.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++++.|.+ +|++|.+..-.
T Consensus 5 k~vlVTGas~g---iG~~ia~~l~~--~G~~V~~~~r~ 37 (255)
T 2q2v_A 5 KTALVTGSTSG---IGLGIAQVLAR--AGANIVLNGFG 37 (255)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 45666666542 35789999999 99999887654
No 332
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.39 E-value=1.3e+02 Score=23.24 Aligned_cols=39 Identities=10% Similarity=0.039 Sum_probs=26.3
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+.+.++++|+++-- +-.-.-.+.+.|.. .|++|..+..
T Consensus 1 Ms~~~~~~~iLivdd----~~~~~~~l~~~L~~--~g~~v~~~~~ 39 (154)
T 2rjn_A 1 MSLNYKNYTVMLVDD----EQPILNSLKRLIKR--LGCNIITFTS 39 (154)
T ss_dssp ---CCSCCEEEEECS----CHHHHHHHHHHHHT--TTCEEEEESC
T ss_pred CCCCCCCCeEEEEcC----CHHHHHHHHHHHHH--cCCeEEEeCC
Confidence 667778889998853 44556677788888 8998875443
No 333
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=23.35 E-value=90 Score=27.21 Aligned_cols=33 Identities=9% Similarity=-0.027 Sum_probs=25.2
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.+..-.
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~--~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVE--GGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 56677776654 45789999999 99999887653
No 334
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=23.31 E-value=74 Score=29.39 Aligned_cols=40 Identities=15% Similarity=0.122 Sum_probs=33.4
Q ss_pred CCcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 11 RMCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 11 ~~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
++++|+|+.. ++.|=..-..++|..|++ +|++|.++....
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~--~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAK--VRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTT--SSSCEEEEECCS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHh--CCCcEEEEECCC
Confidence 4456666655 788999999999999999 999999999764
No 335
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=23.29 E-value=59 Score=29.03 Aligned_cols=32 Identities=9% Similarity=-0.040 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
++||+|+..+..| ..+|+.|++ .||+|+++..
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~--~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAF--HGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHh--CCCeEEEEeC
Confidence 5689999666544 578999999 9999998754
No 336
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=23.29 E-value=69 Score=29.47 Aligned_cols=38 Identities=5% Similarity=-0.075 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCcc-ChH---HHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRG-HIN---PMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~G-H~~---p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++||+++..+..+ |-. ....++++|.+ .||+|..+...
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~--~g~~v~~i~~~ 44 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINK--EKYEPLYIGIT 44 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCT--TTEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhh--cCCEEEEEEEc
Confidence 5788888765333 332 46678999999 99999988653
No 337
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=23.29 E-value=3.9e+02 Score=23.60 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=25.3
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|++++++++.| --.++|+.|.+ +|++|.++.-
T Consensus 29 k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~~ 60 (299)
T 3t7c_A 29 KVAFITGAARG---QGRSHAITLAR--EGADIIAIDV 60 (299)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEec
Confidence 56777777654 45789999999 9999998764
No 338
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=23.22 E-value=51 Score=28.87 Aligned_cols=33 Identities=9% Similarity=-0.094 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+||||+|+..+..| ..+++.|.+ .||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG-----~~~a~~l~~--~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMA-----SAIIKGLKQ--TPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHTT--SSCEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHh--CCCeEEEECC
Confidence 36799999866555 457888999 8999987654
No 339
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.18 E-value=1.2e+02 Score=26.07 Aligned_cols=33 Identities=6% Similarity=-0.117 Sum_probs=23.7
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++.+.| --.++++.|.+ +|++|.++.-.
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVYGGRGA---LGSRCVQAFRA--RNWWVASIDVV 40 (241)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHT--TTCEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHh--CCCEEEEEeCC
Confidence 34555555543 45789999999 99999887653
No 340
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=23.18 E-value=3.2e+02 Score=22.53 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=73.6
Q ss_pred CeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccccccCCCceEeeccchHHhhhhcccceeeccCCcc-
Q 012096 283 SSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFWVSRGDTSWFKDGCVDRGIVVPWCDQLEVLCHSSIGGFWTHCGLN- 361 (471)
Q Consensus 283 ~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~~~~~~~~~~~~~~~~nv~v~~~~pq~~lL~~~~~~~~IthgG~~- 361 (471)
+|.|-|-+||.+. ....+++.+.|++++..+-..+-.- .+.|+. +..|+-. ...-.++.+|.=+|.-
T Consensus 22 kp~V~IimGS~SD--~~v~~~a~~~L~~~gI~~e~~V~SA-----HRtp~~--l~~~~~~---a~~~g~~ViIa~AG~aa 89 (181)
T 4b4k_A 22 KSLVGVIMGSTSD--WETMKYACDILDELNIPYEKKVVSA-----HRTPDY--MFEYAET---ARERGLKVIIAGAGGAA 89 (181)
T ss_dssp CCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCT-----TTSHHH--HHHHHHH---TTTTTCCEEEEEECSSC
T ss_pred CccEEEEECCHhH--HHHHHHHHHHHHHcCCCeeEEEEcc-----ccChHH--HHHHHHH---HHhcCceEEEEeccccc
Confidence 4578888898874 5667788888998887654433221 111110 1111111 1122344588876653
Q ss_pred ---hHHHHHHcCCceecccccccccchh---hhhhhh-hcceee-eecCCCCCCCccCHHHHHHHHHHHhcCCchhHHHH
Q 012096 362 ---STLEAAYAGVPMLTFPIMMDQVPNS---KLIVED-WKIGWK-VKKPEIGSESLVTRDEITELVKRFMDLNNDERKAM 433 (471)
Q Consensus 362 ---s~~eal~~GvP~v~~P~~~DQ~~na---~~v~~~-lG~G~~-l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~ 433 (471)
++. |-..-+|+|.+|.......-- ..+..- -|+.+. +.. .. .+-.++.-++. ++|...+ +.+
T Consensus 90 hLpGvv-Aa~T~~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvai-g~--~ga~NAallA~---qILa~~d---~~l 159 (181)
T 4b4k_A 90 HLPGMV-AAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAI-GK--AGSTNAGLLAA---QILGSFH---DDI 159 (181)
T ss_dssp CHHHHH-HTTCCSCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCS-SH--HHHHHHHHHHH---HHHTTTC---HHH
T ss_pred cchhhH-HhcCCCCEEEEecCCCCccchhhHHHHHhCCCCCceEEEec-CC--ccHHHHHHHHH---HHHccCC---HHH
Confidence 333 334668999999965432211 111111 033322 122 00 00012223332 3443222 889
Q ss_pred HHHHHHHHHHHHHhHhc
Q 012096 434 SKRAREVQEICQEAVAE 450 (471)
Q Consensus 434 ~~~a~~l~~~~~~~~~~ 450 (471)
+++.+..++.+++.+.+
T Consensus 160 ~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 160 HDALELRREAIEKDVRE 176 (181)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998888888876544
No 341
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=23.17 E-value=1.1e+02 Score=28.74 Aligned_cols=39 Identities=13% Similarity=0.043 Sum_probs=29.6
Q ss_pred ccccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 5 RMKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 5 ~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
++....+.++|+|+..+- --+..|..|++ +|++|+++=.
T Consensus 37 ~~~~~~~~~~V~IIGAGi-----aGL~aA~~L~~--~G~~V~VlE~ 75 (376)
T 2e1m_A 37 GLNPPGPPKRILIVGAGI-----AGLVAGDLLTR--AGHDVTILEA 75 (376)
T ss_dssp CSSSCCSCCEEEEECCBH-----HHHHHHHHHHH--TSCEEEEECS
T ss_pred cCCCCCCCceEEEECCCH-----HHHHHHHHHHH--CCCcEEEEec
Confidence 345555668899987763 35788999999 9999998743
No 342
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=23.16 E-value=54 Score=29.30 Aligned_cols=32 Identities=6% Similarity=0.032 Sum_probs=25.5
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
||+|+|+.. +..| ..+|+.|.+ .||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~--~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHD--SAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHH--SSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHh--CCCEEEEEEC
Confidence 479999987 6555 567899999 9999997754
No 343
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=23.13 E-value=98 Score=26.93 Aligned_cols=33 Identities=12% Similarity=0.010 Sum_probs=24.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++++.|.+ +|++|.++.-.
T Consensus 10 k~vlVTGas~g---iG~~ia~~l~~--~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSRG---IGYGIVEELAS--LGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 45666665542 35688999999 99999887653
No 344
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=23.11 E-value=86 Score=28.46 Aligned_cols=33 Identities=12% Similarity=0.100 Sum_probs=24.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCC-C-cEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNP-N-VFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~r-G-h~Vt~~~~~ 51 (471)
++|+|+++..+.. +++++.|++ . | ++|.++...
T Consensus 3 ~~~~Ili~g~g~~------~~l~~~l~~--~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 3 QKPHLLITSAGRR------AKLVEYFVK--EFKTGRVSTADCS 37 (331)
T ss_dssp TCCEEEEESCTTC------HHHHHHHHH--HCCSSEEEEEESC
T ss_pred ccceEEEecCCch------HHHHHHHHH--hcCCCEEEEEeCC
Confidence 4478999866654 478999998 5 6 888877654
No 345
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=23.02 E-value=75 Score=26.31 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCc---cChHHHHH-HHHHHHhcCCC--cEEEEEEC
Q 012096 12 MCHIVALPYPGR---GHINPMMN-LCKLLVSRNPN--VFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~---GH~~p~l~-La~~L~~~~rG--h~Vt~~~~ 50 (471)
||||+++.+... |+..-+.. +++.|.+ +| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~--~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWRE--KHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHH--HCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHH--hCCCCeEEEEec
Confidence 567766655443 66666554 4677777 65 88887654
No 346
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=22.99 E-value=1.3e+02 Score=25.60 Aligned_cols=36 Identities=11% Similarity=-0.059 Sum_probs=23.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.+.++++| ++++ | .--.++++.|.+ +|++|.++.-.
T Consensus 5 ~~~~~vlV-TGas-g--giG~~~a~~l~~--~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALV-TGAG-K--GIGRDTVKALHA--SGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEE-ESTT-S--HHHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCCEEEE-eCCC-c--hHHHHHHHHHHH--CCCEEEEEeCC
Confidence 33445544 4433 2 234678999999 99999887654
No 347
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=22.97 E-value=1.6e+02 Score=25.63 Aligned_cols=33 Identities=3% Similarity=-0.214 Sum_probs=18.6
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 15 IVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 15 il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
++|.+.|-- =..-+=.....+++ +|++|++++-
T Consensus 7 L~v~aHPDD-e~l~~Ggtia~~~~--~G~~V~vv~l 39 (242)
T 2ixd_A 7 LAFGAHADD-VEIGMAGTIAKYTK--QGYEVGICDL 39 (242)
T ss_dssp EEEESSTTH-HHHHHHHHHHHHHH--TTCCEEEEEE
T ss_pred EEEEeCCCh-HHHhHHHHHHHHHH--CCCeEEEEEE
Confidence 455555532 12233344456677 8999888763
No 348
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=22.82 E-value=80 Score=27.42 Aligned_cols=36 Identities=8% Similarity=-0.077 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
.|.|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~--~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKS--KSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 34567777777643 45789999999 99998887654
No 349
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=22.80 E-value=42 Score=30.54 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=25.7
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCc--EEEEEECcc
Q 012096 9 TGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNV--FITFVVTEE 52 (471)
Q Consensus 9 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh--~Vt~~~~~~ 52 (471)
+.++|||+|+..+..|- .+|..|.. .|| +|+++....
T Consensus 4 ~~~~mkI~IiGaG~vG~-----~~a~~l~~--~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 4 TVKPTKLAVIGAGAVGS-----TLAFAAAQ--RGIAREIVLEDIAK 42 (319)
T ss_dssp ---CCEEEEECCSHHHH-----HHHHHHHH--TTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHH-----HHHHHHHh--CCCCCEEEEEeCCh
Confidence 34568999997655443 37778999 899 999987653
No 350
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=22.78 E-value=1.3e+02 Score=23.07 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=29.0
Q ss_pred cCCceecccccccccchhhhhhhhhc-ceeeeecCCCCCCCccCHHHHHHHHHHHhcC
Q 012096 369 AGVPMLTFPIMMDQVPNSKLIVEDWK-IGWKVKKPEIGSESLVTRDEITELVKRFMDL 425 (471)
Q Consensus 369 ~GvP~v~~P~~~DQ~~na~~v~~~lG-~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~ 425 (471)
..+|+|++--..|.......+. . | +--.+.+ . ++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~~-~-g~~~~~l~K-P------~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAVN-E-GQVFRFLNK-P------CQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHHH-H-TCCSEEEES-S------CCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHHH-c-CCeeEEEcC-C------CCHHHHHHHHHHHHHH
Confidence 4677776654444333333332 4 6 5233443 2 5999999999999864
No 351
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=22.76 E-value=85 Score=26.76 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|.+++++++.| --.++|+.|.+ +|++|.+..-.
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALAR--DGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 356667766643 45789999999 99999887654
No 352
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=22.71 E-value=61 Score=28.96 Aligned_cols=34 Identities=15% Similarity=0.022 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|++|++... .|.+ -.+++++|.+ +||+|+.++-.
T Consensus 2 ~~~vlVtGa--tG~i--G~~l~~~L~~--~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILGP--TGAI--GRHIVWASIK--AGNPTYALVRK 35 (307)
T ss_dssp CCCEEEEST--TSTT--HHHHHHHHHH--HTCCEEEEECC
T ss_pred CcEEEEECC--CchH--HHHHHHHHHh--CCCcEEEEECC
Confidence 556766643 3433 3567899999 89999988754
No 353
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.50 E-value=35 Score=29.47 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=23.6
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+....+||+++.++ .-...+++.|.+ .|| |+++...
T Consensus 3 ~~~~~~~~~viI~G~G-----~~G~~la~~L~~--~g~-v~vid~~ 40 (234)
T 2aef_A 3 LIDVAKSRHVVICGWS-----ESTLECLRELRG--SEV-FVLAEDE 40 (234)
T ss_dssp -------CEEEEESCC-----HHHHHHHHHSTT--SEE-EEEESCG
T ss_pred CCCCCCCCEEEEECCC-----hHHHHHHHHHHh--CCe-EEEEECC
Confidence 4444445688888664 334789999999 999 8877643
No 354
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=22.50 E-value=83 Score=30.82 Aligned_cols=48 Identities=10% Similarity=0.070 Sum_probs=34.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccchhhhcCCCCCCCCeEEEecC
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWLSFIGSGHGNHNNIRFETIP 73 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip 73 (471)
+++++.. .+=.-++.+|+.|.+ .|+++. ++......+... |+....+.
T Consensus 25 ~raLISV----~DK~glv~~Ak~L~~--lGfeI~--ATgGTak~L~e~-----GI~v~~V~ 72 (534)
T 4ehi_A 25 MRALLSV----SDKEGIVEFGKELEN--LGFEIL--STGGTFKLLKEN-----GIKVIEVS 72 (534)
T ss_dssp CEEEEEE----SSCTTHHHHHHHHHH--TTCEEE--ECHHHHHHHHHT-----TCCCEECB
T ss_pred cEEEEEE----cccccHHHHHHHHHH--CCCEEE--EccHHHHHHHHC-----CCceeehh
Confidence 4555555 355668999999999 998875 677777778777 55555554
No 355
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=22.48 E-value=1e+02 Score=27.78 Aligned_cols=33 Identities=21% Similarity=0.098 Sum_probs=23.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
||+|+|.... |- --..|++.|.+ +||+|+.+.-
T Consensus 1 M~~ilVtGat--G~--iG~~l~~~L~~--~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICGGA--GY--IGSHAVKKLVD--EGLSVVVVDN 33 (330)
T ss_dssp -CEEEEETTT--SH--HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CCEEEEECCC--cH--HHHHHHHHHHh--CCCEEEEEeC
Confidence 4677766443 22 24678999999 9999999864
No 356
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=22.37 E-value=75 Score=27.83 Aligned_cols=38 Identities=8% Similarity=0.007 Sum_probs=29.4
Q ss_pred CcEE-EEEcC-CCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHI-VALPY-PGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~i-l~~~~-~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+++ +|... ++-|=..-...||..|++ +|++|.++=..
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~--~G~~VlliD~D 56 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYAR--QGKKVGILDAD 56 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHH--TTCCEEEEECC
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHH--CCCeEEEEeCC
Confidence 4444 44433 577899999999999999 99999987644
No 357
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=22.36 E-value=1e+02 Score=27.05 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+.|++++++++.| --.++|+.|.+ +|++|.+...
T Consensus 25 ~~k~vlITGas~g---IG~a~a~~l~~--~G~~V~~~~~ 58 (272)
T 4e3z_A 25 DTPVVLVTGGSRG---IGAAVCRLAAR--QGWRVGVNYA 58 (272)
T ss_dssp CSCEEEETTTTSH---HHHHHHHHHHH--TTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHH--CCCEEEEEcC
Confidence 3467888877653 45789999999 9999987744
No 358
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=22.29 E-value=55 Score=30.59 Aligned_cols=32 Identities=9% Similarity=-0.016 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|+|+|+..+..| ..+|+.|.+ .||+|+++...
T Consensus 23 mkIgiIGlG~mG-----~~~A~~L~~--~G~~V~v~dr~ 54 (358)
T 4e21_A 23 MQIGMIGLGRMG-----ADMVRRLRK--GGHECVVYDLN 54 (358)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred CEEEEECchHHH-----HHHHHHHHh--CCCEEEEEeCC
Confidence 799999766544 578999999 99999988653
No 359
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=22.25 E-value=1.3e+02 Score=22.04 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=21.4
Q ss_pred CceEEEEcCchh--hHHHHHhh-----cCCCeEEEecchH
Q 012096 114 VVSAIIVDTFLA--WAVDVGNR-----RNIPVASFWSMSA 146 (471)
Q Consensus 114 ~~D~vI~D~~~~--~~~~~A~~-----lgIP~v~~~~~~~ 146 (471)
+||+||.|...+ .+..+.+. .++|++.++....
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 699999997542 34433333 3688888766543
No 360
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=22.22 E-value=39 Score=32.10 Aligned_cols=31 Identities=16% Similarity=0.140 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCC-CcEEEEEE
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNP-NVFITFVV 49 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh~Vt~~~ 49 (471)
||||+|+..+..|. .+|..|++ + ||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~--~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAAS--RDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTT--STTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHh--CCCCEEEEEe
Confidence 47999998877664 56888877 5 99999987
No 361
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.15 E-value=78 Score=27.40 Aligned_cols=36 Identities=22% Similarity=0.191 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCc--cChHHHHH-HHHHHHhcCC-CcEEEEEE
Q 012096 12 MCHIVALPYPGR--GHINPMMN-LCKLLVSRNP-NVFITFVV 49 (471)
Q Consensus 12 ~~~il~~~~~~~--GH~~p~l~-La~~L~~~~r-Gh~Vt~~~ 49 (471)
||||+++.+... |+..-+.. +++.|.+ . |++|.++-
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~--~~g~~v~~~d 40 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISS--RNNVDISFRT 40 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHH--HSCCEEEEEC
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHH--hcCCeEEEEE
Confidence 567777766543 66665554 4677777 6 99998864
No 362
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.06 E-value=35 Score=31.14 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=0.0
Q ss_pred HhhhhcccceeeccCCcchHHHHHHc----CCceecccc
Q 012096 344 EVLCHSSIGGFWTHCGLNSTLEAAYA----GVPMLTFPI 378 (471)
Q Consensus 344 ~lL~~~~~~~~IthgG~~s~~eal~~----GvP~v~~P~ 378 (471)
.....+++ +|+-||=||+.+++.. ++|++.++.
T Consensus 71 ~~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 71 HAADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp -----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
No 363
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=21.98 E-value=1.2e+02 Score=27.18 Aligned_cols=39 Identities=13% Similarity=-0.046 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCc--cChHHHHH-HHHHHHhcCCCcEEEEEEC
Q 012096 10 GRMCHIVALPYPGR--GHINPMMN-LCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 10 ~~~~~il~~~~~~~--GH~~p~l~-La~~L~~~~rGh~Vt~~~~ 50 (471)
..||||+++.+..+ |...-+.. +++.+.+ .|++|.++--
T Consensus 56 ~~~mKILiI~GS~R~~S~T~~La~~~~~~l~~--~G~eveiidL 97 (279)
T 2fzv_A 56 APPVRILLLYGSLRARSFSRLAVEEAARLLQF--FGAETRIFDP 97 (279)
T ss_dssp CSCCEEEEEESCCSSSCHHHHHHHHHHHHHHH--TTCEEEEBCC
T ss_pred CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHhh--CCCEEEEEeh
Confidence 45688877776544 55555554 5677777 8999988654
No 364
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=21.84 E-value=62 Score=30.12 Aligned_cols=38 Identities=8% Similarity=-0.012 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCcc-Ch---HHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 12 MCHIVALPYPGRG-HI---NPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 12 ~~~il~~~~~~~G-H~---~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+|||+++..+-.+ |- .-...++++|.+ +||+|..+...
T Consensus 3 ~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~--~g~~v~~i~~~ 44 (364)
T 2i87_A 3 KENICIVFGGKSAEHEVSILTAQNVLNAIDK--DKYHVDIIYIT 44 (364)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHTSCT--TTEEEEEEEEC
T ss_pred CcEEEEEECCCCccchhHHHHHHHHHHHHhh--cCCEEEEEEEc
Confidence 5788888865433 32 344778999999 99999988753
No 365
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=21.80 E-value=56 Score=28.38 Aligned_cols=31 Identities=19% Similarity=0.110 Sum_probs=23.2
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
.||+|| +|+.. .-++.=|.++|||+|.++-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 599987 56554 45666789999999997543
No 366
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=21.76 E-value=1.4e+02 Score=22.51 Aligned_cols=39 Identities=8% Similarity=0.093 Sum_probs=24.5
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|+...++++|+++- .+-.-.-.+.+.|.+ .|++|..+..
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~--~g~~v~~~~~ 39 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSD--AGFHIISADS 39 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHH--TTCEEEEESS
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHH--CCeEEEEeCC
Confidence 55566678898885 455556677888888 8888765443
No 367
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=21.73 E-value=1.2e+02 Score=25.69 Aligned_cols=35 Identities=11% Similarity=-0.006 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+.|+|+|.... |. --..+++.|.+ +||+|+.++-.
T Consensus 20 ~~~~ilVtGat--G~--iG~~l~~~L~~--~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVGAN--GK--VARYLLSELKN--KGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEETTT--SH--HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCeEEEECCC--Ch--HHHHHHHHHHh--CCCeEEEEECC
Confidence 34677666442 22 34678999999 99999998854
No 368
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=21.63 E-value=90 Score=28.82 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhcCC-CcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPMMNLCKLLVSRNP-NVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh~Vt~~~~~ 51 (471)
++||+|+|.... |.+ -..|++.|.+ + ||+|+.++-.
T Consensus 22 m~~~~vlVtGat--G~i--G~~l~~~L~~--~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGVN--GFI--GHHLSKRILE--TTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESCS--SHH--HHHHHHHHHH--HSSCEEEEEESC
T ss_pred cCCCEEEEECCC--ChH--HHHHHHHHHh--CCCCEEEEEeCC
Confidence 446787776543 332 3578899998 7 9999998854
No 369
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=21.48 E-value=1.1e+02 Score=30.06 Aligned_cols=35 Identities=11% Similarity=-0.053 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
+||+|+|....+ - --..|++.|.+ +||+|+.++-.
T Consensus 146 k~m~VLVTGatG--~--IG~~l~~~L~~--~G~~V~~l~R~ 180 (516)
T 3oh8_A 146 SPLTVAITGSRG--L--VGRALTAQLQT--GGHEVIQLVRK 180 (516)
T ss_dssp CCCEEEEESTTS--H--HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEECCCC--H--HHHHHHHHHHH--CCCEEEEEECC
Confidence 378988776443 2 23578999999 99999998854
No 370
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=21.44 E-value=1.2e+02 Score=27.44 Aligned_cols=35 Identities=6% Similarity=-0.003 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 11 RMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 11 ~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|+|+|.... |. --..|++.|.+ +||+|+.++-.
T Consensus 12 ~~M~ilVtGat--G~--iG~~l~~~L~~--~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGAT--GL--LGHHAARAIRA--AGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEESTT--SH--HHHHHHHHHHH--TTCEEEEEECT
T ss_pred cCCEEEEECCC--cH--HHHHHHHHHHH--CCCEEEEEecC
Confidence 34677776543 32 34678899999 99999998754
No 371
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=21.29 E-value=40 Score=29.37 Aligned_cols=38 Identities=21% Similarity=0.229 Sum_probs=25.3
Q ss_pred HHHHHHHhhhcCCCceEEEEcCch---hh----HHHHHhhcCCCeEEE
Q 012096 101 FEKVLDFLQVEAPVVSAIIVDTFL---AW----AVDVGNRRNIPVASF 141 (471)
Q Consensus 101 ~~~ll~~l~~~~~~~D~vI~D~~~---~~----~~~~A~~lgIP~v~~ 141 (471)
+.++++++. .+||++++|.+. +- +.-+.-.+++|.|-+
T Consensus 97 ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 97 VLAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 444556665 369999999875 22 233445567999986
No 372
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=21.23 E-value=1.5e+02 Score=24.23 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|+|++... .| .--..+++.|.+ +||+|+.++-..
T Consensus 4 ~~ilVtGa--tG--~iG~~l~~~l~~--~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGA--TG--QTGLTTLAQAVQ--AGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEEST--TS--HHHHHHHHHHHH--TTCEEEEEESCG
T ss_pred CEEEEEcC--Cc--HHHHHHHHHHHH--CCCeEEEEEeCh
Confidence 56766643 23 235688999999 999999987643
No 373
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=21.19 E-value=1.1e+02 Score=31.15 Aligned_cols=95 Identities=11% Similarity=0.005 Sum_probs=52.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECccch-----------hhhcCCCCCCCCeEEEecCCCCCCchh
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEEWL-----------SFIGSGHGNHNNIRFETIPNVIPSELV 81 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~~~-----------~~~~~~~~~~~~~~~~~ip~~~~~~~~ 81 (471)
|||+|+..+..| ....++|.+ +||+|..+.+.... +...+. ++.+..... . .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~--~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~-----~ip~~~~~~-~----~ 63 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLA--AGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAPDN-V----N 63 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHH--TTCEEEEEECCCC--------CCHHHHHHHH-----TCCEECCSC-T----T
T ss_pred CEEEEEEeCHHH-----HHHHHHHHh--CCCCEEEEEeCCCCCccCcCccHHHHHHHHc-----CCCEeccCC-C----C
Confidence 578887655322 334678888 89999887764322 111112 333332211 0 0
Q ss_pred hhhcHHHHHHHHHHhchHHHHHHHHHhhhcCCCceEEEEcCch-hhHHHHHhhcCCCeEEEecch
Q 012096 82 RARDFLAFVESVSTKMEAPFEKVLDFLQVEAPVVSAIIVDTFL-AWAVDVGNRRNIPVASFWSMS 145 (471)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~-~~~~~~A~~lgIP~v~~~~~~ 145 (471)
+ ..+.+.++++ +||+||+-.+. .....+-..+...++-++++.
T Consensus 64 ---~-------------~~~~~~l~~~-----~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~sl 107 (660)
T 1z7e_A 64 ---H-------------PLWVERIAQL-----SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSL 107 (660)
T ss_dssp ---S-------------HHHHHHHHHH-----CCSEEEEESCCSCCCHHHHTTCTTCEEEEESSS
T ss_pred ---c-------------HHHHHHHHhc-----CCCEEEEcCcccccCHHHHhcCCCCeEEecCCc
Confidence 0 1123344554 59999987765 444445566666678777763
No 374
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.15 E-value=1.2e+02 Score=25.49 Aligned_cols=34 Identities=18% Similarity=0.053 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECcc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTEE 52 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~~ 52 (471)
|||+|.... |- --..++++|.+ +||+|+.++-..
T Consensus 1 M~ilItGat--G~--iG~~l~~~L~~--~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVGST--GR--VGKSLLKSLST--TDYQIYAGARKV 34 (219)
T ss_dssp CEEEEESTT--SH--HHHHHHHHHTT--SSCEEEEEESSG
T ss_pred CeEEEECCC--CH--HHHHHHHHHHH--CCCEEEEEECCc
Confidence 466666433 22 33688999999 999999988653
No 375
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=21.09 E-value=63 Score=31.12 Aligned_cols=38 Identities=13% Similarity=-0.003 Sum_probs=25.0
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.....+|||+|+..+..| +.+|..|++ ||+|+++-..
T Consensus 30 ~~r~~~~mkIaVIGlG~mG-----~~lA~~La~---G~~V~~~D~~ 67 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVG-----LSNGVLIAQ---NHEVVALDIV 67 (432)
T ss_dssp -----CCCEEEEECCSHHH-----HHHHHHHHT---TSEEEEECSC
T ss_pred cccccCCCEEEEECcCHHH-----HHHHHHHHc---CCeEEEEecC
Confidence 4455667899999777655 456777765 9999998754
No 376
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=21.07 E-value=1.1e+02 Score=23.07 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=20.4
Q ss_pred CceEEEEcCchh--hHHHHHhh-------cCCCeEEEecch
Q 012096 114 VVSAIIVDTFLA--WAVDVGNR-------RNIPVASFWSMS 145 (471)
Q Consensus 114 ~~D~vI~D~~~~--~~~~~A~~-------lgIP~v~~~~~~ 145 (471)
.||+||+|...+ .+..+.+. ..+|++.++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~ 87 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKP 87 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCC
Confidence 699999997652 34433333 258888876543
No 377
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=20.93 E-value=92 Score=26.00 Aligned_cols=67 Identities=13% Similarity=0.166 Sum_probs=36.6
Q ss_pred chhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHH----hHhcCCCcHHH
Q 012096 384 PNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMDLNNDE--RKAMSKRAREVQEICQE----AVAENGSSITN 457 (471)
Q Consensus 384 ~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~--~~~~~~~a~~l~~~~~~----~~~~~g~~~~~ 457 (471)
.+...+++.-|+|+.+ |++++.++|.++++....+ -++|+ +.-.+-..+|+ -++.+..--..
T Consensus 102 id~~~Fe~~cGVGV~V-----------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~ 169 (187)
T 3tl4_X 102 STKMGMNENSGVGIEI-----------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPI 169 (187)
T ss_dssp CCHHHHHHTTTTTCCC-----------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHH
T ss_pred CCHHHHHHHCCCCeEe-----------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 3444455443666554 8899999999988532110 13455 55555555553 23344444444
Q ss_pred HHHHH
Q 012096 458 FDAFL 462 (471)
Q Consensus 458 ~~~~~ 462 (471)
+++-+
T Consensus 170 vD~~~ 174 (187)
T 3tl4_X 170 IDQEV 174 (187)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 54433
No 378
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=20.89 E-value=31 Score=30.58 Aligned_cols=53 Identities=25% Similarity=0.384 Sum_probs=36.9
Q ss_pred hcccceeeccCCcchHHHHHHc---CCceecccccccccchhhhhhhhhcceeeeecCCCCCCCccCHHHHHHHHHHHhc
Q 012096 348 HSSIGGFWTHCGLNSTLEAAYA---GVPMLTFPIMMDQVPNSKLIVEDWKIGWKVKKPEIGSESLVTRDEITELVKRFMD 424 (471)
Q Consensus 348 ~~~~~~~IthgG~~s~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~lG~G~~l~~~~~~~~~~~~~~~l~~~i~~~l~ 424 (471)
.+++ +|+=||=||+.+++.. ++|+++++. + . +|..-+ +.++++.++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G-----------~--~Gfl~~---------~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G-----------R--LGFLTS---------YTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S-----------S--CCSSCC---------BCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-----------C--CCccCc---------CCHHHHHHHHHHHHc
Confidence 3555 9999999999999876 788888763 1 1 122211 356778888888776
Q ss_pred C
Q 012096 425 L 425 (471)
Q Consensus 425 ~ 425 (471)
+
T Consensus 96 g 96 (258)
T 1yt5_A 96 W 96 (258)
T ss_dssp T
T ss_pred C
Confidence 4
No 379
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=20.89 E-value=66 Score=29.91 Aligned_cols=38 Identities=5% Similarity=-0.144 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCcc-Ch---HHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 11 RMCHIVALPYPGRG-HI---NPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 11 ~~~~il~~~~~~~G-H~---~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
+++||+++.++..+ |- ....+++++|.+ .||+|..+..
T Consensus 2 ~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~--~gy~v~~i~i 43 (357)
T 4fu0_A 2 QNKKIAVIFGGNSTEYEVSLQSASAVFENINT--NKFDIIPIGI 43 (357)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT--TTEEEEEEEE
T ss_pred CCCEEEEEECCCccchHHHHHHHHHHHHHHhH--hCCEEEEEEE
Confidence 45689888665433 53 334568899999 9999998753
No 380
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=20.89 E-value=1e+02 Score=25.53 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=24.8
Q ss_pred CcEEEEEcCCC--ccChHHHHH-HHHH-HHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPG--RGHINPMMN-LCKL-LVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~--~GH~~p~l~-La~~-L~~~~rGh~Vt~~~~ 50 (471)
||||+++.+.. .|+..-+.. +++. |.+ +|++|.++--
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~--~g~~v~~~dl 42 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLAR--SDSQGRHIHV 42 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHH--SSEEEEEEEG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHH--CCCeEEEEEc
Confidence 56887776653 366655555 4566 777 7999887653
No 381
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=20.87 E-value=74 Score=27.95 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=24.0
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecch
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSMS 145 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~~ 145 (471)
.||+|| +|... .-++.=|.++|||+|.++-+.
T Consensus 117 ~PdllvV~Dp~~d~~ai~EA~~l~IP~Ial~DTn 150 (252)
T 3u5c_A 117 EPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLD 150 (252)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEEEECTT
T ss_pred CCceEEEeCCccchHHHHHHHHcCCCEEEEEcCC
Confidence 499886 56655 556667899999999986543
No 382
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=20.85 E-value=65 Score=27.25 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCcc---ChHHHH-HHHHHHHhcCCCcEEEEEEC
Q 012096 12 MCHIVALPYPGRG---HINPMM-NLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~~~~G---H~~p~l-~La~~L~~~~rGh~Vt~~~~ 50 (471)
||||+++....++ +..-+. .+++.|.+.+.||+|+++--
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL 43 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREV 43 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 5677776665444 333333 35667776222899888654
No 383
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.80 E-value=71 Score=27.23 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=24.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
||.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~--~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDA--EGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHH--TTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 356667766643 45788999999 99999887754
No 384
>2o3i_A Hypothetical protein; NESG, CVR68, Q7NTB2, structural genomics, PSI-2, protein structure initiative; 2.30A {Chromobacterium violaceum} SCOP: e.73.1.1
Probab=20.75 E-value=60 Score=30.83 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=53.9
Q ss_pred EcCCCccChHHHHHHHHHHHhcCCC----cEEEEEECccchhhhcCCCCCCCCeEEEecCCCCCCchhhhhcHHHHHHHH
Q 012096 18 LPYPGRGHINPMMNLCKLLVSRNPN----VFITFVVTEEWLSFIGSGHGNHNNIRFETIPNVIPSELVRARDFLAFVESV 93 (471)
Q Consensus 18 ~~~~~~GH~~p~l~La~~L~~~~rG----h~Vt~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~ 93 (471)
+..++-|.......+++...+ .| +.|.++...+..+-. -. .+....-|....+...... . . ..
T Consensus 20 LGtGGGG~p~~~~l~~~~~l~--~~~~~~~~v~lv~~del~dd~-vv-----~v~~mGAP~v~~Ekl~p~g---~-~-~A 86 (405)
T 2o3i_A 20 FGSGGGGTMISARHLAANFRK--GDYYPTDKVRVVDVDEATDGD-CV-----MVAYMGAPDAINQVQWPNG---P-V-EA 86 (405)
T ss_dssp TTTTCSCCHHHHHHHHTTCSB--TTTBSCSCEEEECGGGCCSSE-EE-----EEEEEECHHHHTTCSSCHH---H-H-HH
T ss_pred EeeCCCCcHHHHHHHHHHHHH--hCCCCCCceEEecHHHcCCCc-EE-----EeeeccCChhhhcccCCCC---c-H-HH
Confidence 445666786666666766667 78 799998865432211 11 2223333322111100011 1 1 11
Q ss_pred HHhchHHHHHHHHHhhhcCCCceEEEEcCch----hhHHHHHhhcCCCeEE
Q 012096 94 STKMEAPFEKVLDFLQVEAPVVSAIIVDTFL----AWAVDVGNRRNIPVAS 140 (471)
Q Consensus 94 ~~~~~~~~~~ll~~l~~~~~~~D~vI~D~~~----~~~~~~A~~lgIP~v~ 140 (471)
++ .+++.+..+. +++|.|+..... ..++.+|.++|+|+|=
T Consensus 87 ~~----~le~~~~~~g---~~~~avi~~EiGG~N~~~pl~~AA~~GlPvVD 130 (405)
T 2o3i_A 87 AL----AARQRLESQG---RKLAYVVAPESGALGFVVASLVAAKLGLAVVD 130 (405)
T ss_dssp HH----HHHHHHHHTT---CCEEEEECSSSSHHHHHHHHHHHHHHTCEEES
T ss_pred HH----HHHHHHHhcC---CCccEEEeeccCccchHHHHHHHHHcCCCEEc
Confidence 11 1223322243 479999976653 4556678899999994
No 385
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=20.74 E-value=1.5e+02 Score=26.70 Aligned_cols=40 Identities=5% Similarity=-0.018 Sum_probs=26.8
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|....++++|+|.... |.+ -..|++.|.+ +||+|+.+.-.
T Consensus 5 ~~~~~~~~~vlVTGat--G~i--G~~l~~~L~~--~g~~V~~~~r~ 44 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGAN--GFV--ASHVVEQLLE--HGYKVRGTARS 44 (342)
T ss_dssp TCSSCTTCEEEEETTT--SHH--HHHHHHHHHH--TTCEEEEEESS
T ss_pred cccCCCCCEEEEECCc--cHH--HHHHHHHHHH--CCCEEEEEeCC
Confidence 4444455677766443 322 3578899999 99999988754
No 386
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.74 E-value=2.6e+02 Score=23.78 Aligned_cols=44 Identities=9% Similarity=-0.128 Sum_probs=28.1
Q ss_pred ceEeeccch-HHh-hhhcccceeeccCCcchHHHHH---------HcCCceecccc
Q 012096 334 GIVVPWCDQ-LEV-LCHSSIGGFWTHCGLNSTLEAA---------YAGVPMLTFPI 378 (471)
Q Consensus 334 v~v~~~~pq-~~l-L~~~~~~~~IthgG~~s~~eal---------~~GvP~v~~P~ 378 (471)
+.++...+. ..+ ...++. .++--||.||.-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 344444443 223 344443 466679999988876 47999998864
No 387
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=20.74 E-value=85 Score=26.27 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=22.6
Q ss_pred CcEEEEEcC-CC---ccChHHHHH-HHHHHHhcCCC--cEEEEEEC
Q 012096 12 MCHIVALPY-PG---RGHINPMMN-LCKLLVSRNPN--VFITFVVT 50 (471)
Q Consensus 12 ~~~il~~~~-~~---~GH~~p~l~-La~~L~~~~rG--h~Vt~~~~ 50 (471)
||||+++.. +- .|+..-+.. +++.|.+ +| ++|.++--
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~--~g~~~~v~~~dL 44 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRE--TNPSDEIEILDV 44 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHH--HCTTSEEEEEET
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHH--hCCCCeEEEeeC
Confidence 467766555 44 266555544 5677777 66 99888753
No 388
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=20.62 E-value=71 Score=28.83 Aligned_cols=32 Identities=9% Similarity=0.125 Sum_probs=24.2
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecch
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSMS 145 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~~ 145 (471)
.||+|| +|... .-++.=|.++|||+|.++-+.
T Consensus 118 ~PdlliV~Dp~~e~~AI~EA~~lgIPvIalvDTn 151 (295)
T 2zkq_b 118 EPRLLVVTDPRADHQPLTEASYVNLPTIALCNTD 151 (295)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEECTT
T ss_pred CCCeEEEeCCCcchhHHHHHHHhCCCEEEEecCC
Confidence 599887 56655 556677999999999986543
No 389
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.62 E-value=1.4e+02 Score=25.59 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=31.1
Q ss_pred chhccccccCCCCeEEEEEeCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 012096 271 DNYFHWLDSQPDSSVLYVSLGSLWSVSSVQMDEIVAGVRNSGVRFFW 317 (471)
Q Consensus 271 ~~~~~~l~~~~~~~~I~vs~GS~~~~~~~~~~~~~~al~~~~~~vi~ 317 (471)
+.+.+|+.. .+.+++|..|+........+..+.++++++++.++.
T Consensus 22 ~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 22 PLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 345667753 334999998875443445577789999999987654
No 390
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=20.45 E-value=60 Score=28.39 Aligned_cols=31 Identities=23% Similarity=0.200 Sum_probs=23.4
Q ss_pred CceEEE-EcCch-hhHHHHHhhcCCCeEEEecc
Q 012096 114 VVSAII-VDTFL-AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 114 ~~D~vI-~D~~~-~~~~~~A~~lgIP~v~~~~~ 144 (471)
.||+|| +|... .-++.=|.++|||+|.++-+
T Consensus 114 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvDT 146 (241)
T 2xzm_B 114 EPRVLIVTDPRSDFQAIKEASYVNIPVIALCDS 146 (241)
T ss_dssp CCSEEEESCTTTTHHHHHHHTTTTCCEEECCCS
T ss_pred CCCEEEEECCCcchHHHHHHHHhCCCEEEEecC
Confidence 599887 56554 45667789999999997544
No 391
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=20.43 E-value=1.4e+02 Score=25.60 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCcc----ChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 10 GRMCHIVALPYPGRG----HINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~G----H~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
++|.+|.++++...+ +..-...|++.|++ +|+.|..-...
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~--~g~~lV~GGg~ 50 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVK--RKIDLVYGGGS 50 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHH--TTCEEEECCCS
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHH--CCCEEEECCCc
Confidence 456679999876554 34567888999999 99988766554
No 392
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.39 E-value=81 Score=28.89 Aligned_cols=30 Identities=10% Similarity=-0.002 Sum_probs=20.8
Q ss_pred CceEEEEcCchhhHHHHHhhcCCCeEEEec
Q 012096 114 VVSAIIVDTFLAWAVDVGNRRNIPVASFWS 143 (471)
Q Consensus 114 ~~D~vI~D~~~~~~~~~A~~lgIP~v~~~~ 143 (471)
+||+||..........--++.|||++.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 699999876433333344667999999753
No 393
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=20.38 E-value=1.4e+02 Score=26.78 Aligned_cols=39 Identities=13% Similarity=0.183 Sum_probs=29.3
Q ss_pred CCCcEEEEEcCCCccChHHH--HHHHHHHHhcCCC-cEEEEEECc
Q 012096 10 GRMCHIVALPYPGRGHINPM--MNLCKLLVSRNPN-VFITFVVTE 51 (471)
Q Consensus 10 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~~~rG-h~Vt~~~~~ 51 (471)
.++.|+||+.... +|-.+. -.|++.|.+ .| ++|++....
T Consensus 2 ~~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~--~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQN-NHNWQVSHVVLKQILEN--SGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESCC-SSCHHHHHHHHHHHHHH--TTSEEEEEEECC
T ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHHHHh--cCCEEEEEEeCC
Confidence 3578999995544 887554 567788888 88 999998764
No 394
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=20.36 E-value=74 Score=27.92 Aligned_cols=33 Identities=3% Similarity=-0.066 Sum_probs=25.9
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLE--HGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHH--TTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 56777777654 45789999999 99999988754
No 395
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=20.33 E-value=75 Score=26.66 Aligned_cols=31 Identities=16% Similarity=0.024 Sum_probs=23.1
Q ss_pred cEEEEEc-CCCccChHHHHHHHHHHHhcCCCcEEEEEEC
Q 012096 13 CHIVALP-YPGRGHINPMMNLCKLLVSRNPNVFITFVVT 50 (471)
Q Consensus 13 ~~il~~~-~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~ 50 (471)
|||+|+. .+..| ..+++.|.+ .||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~--~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLAT--LGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHT--TTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHH--CCCEEEEEeC
Confidence 4788885 44334 467899999 9999998764
No 396
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=20.29 E-value=4.2e+02 Score=22.82 Aligned_cols=28 Identities=21% Similarity=0.008 Sum_probs=19.6
Q ss_pred CceEEEEcCch----hhHHHHHhhcCCCeEEE
Q 012096 114 VVSAIIVDTFL----AWAVDVGNRRNIPVASF 141 (471)
Q Consensus 114 ~~D~vI~D~~~----~~~~~~A~~lgIP~v~~ 141 (471)
++|.||..... ......+...|||+|.+
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 92 (291)
T 3l49_A 61 KPDAIIEQLGNLDVLNPWLQKINDAGIPLFTV 92 (291)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEEeCCChhhhHHHHHHHHHCCCcEEEe
Confidence 69999976543 23344566779999997
No 397
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=20.27 E-value=1.6e+02 Score=24.85 Aligned_cols=39 Identities=10% Similarity=-0.020 Sum_probs=30.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhcCC-CcEEEEEECccc
Q 012096 12 MCHIVALPYPGRGHINPMMNLCKLLVSRNP-NVFITFVVTEEW 53 (471)
Q Consensus 12 ~~~il~~~~~~~GH~~p~l~La~~L~~~~r-Gh~Vt~~~~~~~ 53 (471)
|.||+|+.+++...+- +...++.|.+ + |++|+++++...
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~--~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQ--REDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHT--STTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhc--cCCeEEEEEECCCC
Confidence 6789999988776554 4466778888 6 999999998654
No 398
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.24 E-value=1e+02 Score=27.13 Aligned_cols=33 Identities=6% Similarity=-0.099 Sum_probs=26.1
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 14 HIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 14 ~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|.+++++++.| --.++|+.|.+ +|++|.++.-.
T Consensus 31 k~vlVTGas~G---IG~aia~~l~~--~G~~Vi~~~r~ 63 (281)
T 3ppi_A 31 ASAIVSGGAGG---LGEATVRRLHA--DGLGVVIADLA 63 (281)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEECCCCh---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 67778877755 46789999999 99999887643
No 399
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=20.21 E-value=1.5e+02 Score=27.33 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCC
Q 012096 297 SSVQMDEIVAGVRNSGVRFFWVSRGD 322 (471)
Q Consensus 297 ~~~~~~~~~~al~~~~~~vi~~~~~~ 322 (471)
+......+.+++....++.||...+.
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 45668889999999999999998764
No 400
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=20.15 E-value=25 Score=31.84 Aligned_cols=32 Identities=9% Similarity=0.034 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEECc
Q 012096 13 CHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVVTE 51 (471)
Q Consensus 13 ~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~~~ 51 (471)
|||+|+..++.|- .+|..|.+ .||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~--~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQ--SLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHH--HCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHH--CCCeEEEEEec
Confidence 6899998887774 67889999 89999999865
No 401
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.04 E-value=1.8e+02 Score=21.38 Aligned_cols=38 Identities=11% Similarity=-0.115 Sum_probs=26.3
Q ss_pred cccCCCCcEEEEEcCCCccChHHHHHHHHHHHhcCCCcEEEEEE
Q 012096 6 MKATGRMCHIVALPYPGRGHINPMMNLCKLLVSRNPNVFITFVV 49 (471)
Q Consensus 6 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~~~rGh~Vt~~~ 49 (471)
|+...+.++|+++- .+-.-...+.+.|.+ .|++|..+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~--~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSS--LGATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHH--TTCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHh--CCceEEEeC
Confidence 55566678898885 455556677888888 899887644
No 402
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=20.00 E-value=1.3e+02 Score=26.73 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=28.7
Q ss_pred HHHHHHHhhhcCCCceEEEEcCch------hhHHHHHhhcCCCeEEEecc
Q 012096 101 FEKVLDFLQVEAPVVSAIIVDTFL------AWAVDVGNRRNIPVASFWSM 144 (471)
Q Consensus 101 ~~~ll~~l~~~~~~~D~vI~D~~~------~~~~~~A~~lgIP~v~~~~~ 144 (471)
+.+++++. +||+||+.... .-+..+|..||+|.+...+.
T Consensus 104 La~~i~~~-----~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 104 LTEVIKKE-----APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHH-----CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHhc-----CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 44455554 49999987654 26778999999999997553
Done!