Query 012099
Match_columns 471
No_of_seqs 186 out of 1101
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 21:36:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012099.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012099hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vz6_A Ornithine acetyl-transf 100.0 2E-159 5E-164 1219.4 32.9 385 66-471 3-393 (393)
2 1vra_B Arginine biosynthesis b 100.0 1.4E-93 4.7E-98 683.2 19.0 214 252-471 1-215 (215)
3 2v4i_B Glutamate N-acetyltrans 100.0 8.9E-91 3E-95 662.2 17.5 207 252-471 1-213 (213)
4 3it4_B Arginine biosynthesis b 100.0 1.7E-90 5.7E-95 657.5 16.0 205 252-471 1-205 (205)
5 1vra_A Arginine biosynthesis b 100.0 1.1E-75 3.8E-80 557.1 16.4 193 55-251 16-208 (208)
6 3it4_A Arginine biosynthesis b 100.0 4E-74 1.4E-78 544.0 18.0 186 61-251 8-199 (199)
7 2v4i_A Glutamate N-acetyltrans 100.0 7.4E-73 2.5E-77 525.6 18.6 173 71-251 1-173 (173)
8 2kua_A BCL-2-like protein 10; 59.3 6.1 0.00021 36.2 3.3 33 354-392 68-102 (170)
9 1r2d_A Apoptosis regulator BCL 56.1 2.2 7.6E-05 40.9 -0.2 19 375-393 130-148 (218)
10 2y6w_A BCL-2-like protein 2; a 53.7 8.5 0.00029 35.3 3.3 15 376-390 100-114 (177)
11 3qbr_A SJA, sjchgc06286 protei 53.7 7.7 0.00026 36.2 3.0 34 351-391 95-128 (179)
12 2vof_A BCL-2-related protein A 51.6 8.8 0.0003 34.4 3.0 35 353-393 67-102 (157)
13 1b65_A DMPA, protein (aminopep 49.5 22 0.00076 36.6 5.9 220 57-302 21-299 (375)
14 3n2w_A Beta-peptidyl aminopept 49.0 11 0.00036 38.9 3.5 51 251-303 249-300 (373)
15 2jz7_A Selenium binding protei 48.1 18 0.00063 29.6 4.1 61 213-303 9-70 (81)
16 2wh6_A Early antigen protein R 47.8 6 0.00021 36.7 1.3 27 357-389 91-118 (173)
17 2w3l_A BCL2-XL, apoptosis regu 45.5 7 0.00024 34.4 1.3 19 375-393 75-93 (144)
18 1k3k_A Functional anti-apoptot 43.7 11 0.00037 34.2 2.3 32 355-392 62-94 (158)
19 3axg_A Endotype 6-aminohexanoa 43.7 24 0.00081 36.1 5.0 86 57-165 44-129 (355)
20 2ims_A Apoptosis regulator BAK 42.9 14 0.00047 33.6 2.9 34 354-393 88-121 (171)
21 3sp7_A BCL-2-like protein 1; a 42.9 8 0.00027 35.5 1.3 17 375-391 93-109 (172)
22 3s3u_A Cysteine transferase; a 41.5 17 0.00058 37.9 3.7 83 67-163 53-141 (419)
23 1o0l_A Apoptosis regulator BCL 40.4 8.9 0.00031 35.4 1.2 17 375-391 91-107 (188)
24 2drh_A PH0078 protein, 361AA l 38.4 7.3 0.00025 40.0 0.3 215 67-302 19-288 (361)
25 4aq3_A Apoptosis regulator BCL 38.0 26 0.00088 32.0 3.9 15 376-390 100-114 (169)
26 1ohu_A Apoptosis regulator CED 36.8 20 0.0007 32.9 3.0 14 378-391 97-110 (175)
27 4hw4_A Induced myeloid leukemi 36.0 14 0.00048 33.3 1.7 17 375-391 83-100 (157)
28 2nl9_A Fusion protein consisti 33.5 12 0.0004 33.5 0.8 15 379-393 88-102 (157)
29 2xa0_A BCL-2, apoptosis regula 31.3 16 0.00056 34.5 1.5 64 318-393 92-155 (207)
30 3pk1_A Induced myeloid leukemi 31.1 16 0.00054 34.2 1.3 18 375-392 116-134 (189)
31 3ilc_A BCL-2-like protein 1; a 28.4 21 0.00071 33.7 1.6 18 375-392 131-148 (197)
32 2a5y_A Apoptosis regulator CED 27.2 20 0.00068 33.9 1.2 14 378-391 117-130 (204)
33 4b4s_A BCL-2-like protein 10; 26.7 18 0.00061 33.3 0.8 16 378-393 82-97 (175)
34 3m20_A 4-oxalocrotonate tautom 25.9 70 0.0024 23.5 3.9 31 144-174 10-40 (62)
35 3fwt_A Macrophage migration in 25.8 61 0.0021 27.9 4.0 30 145-174 90-119 (133)
36 3b64_A Macrophage migration in 25.8 59 0.002 26.5 3.8 30 145-174 69-98 (112)
37 3abf_A 4-oxalocrotonate tautom 25.2 69 0.0023 23.1 3.7 30 145-174 13-42 (64)
38 1hfo_A Migration inhibitory fa 24.5 63 0.0022 26.3 3.7 30 145-174 68-97 (113)
39 3nxa_A Protein S100-A16; S100 24.3 69 0.0024 25.9 3.9 23 315-337 73-95 (100)
40 1uiz_A MIF, macrophage migrati 23.7 66 0.0023 26.3 3.7 30 145-174 69-98 (115)
41 2xcz_A Possible ATLS1-like lig 23.4 70 0.0024 26.1 3.8 31 144-174 68-98 (115)
42 1f16_A Protein (apoptosis regu 22.5 28 0.00094 32.3 1.2 17 377-393 102-118 (192)
43 2os5_A Acemif; macrophage migr 21.6 76 0.0026 26.2 3.7 30 145-174 69-98 (119)
44 3djh_A Macrophage migration in 21.3 79 0.0027 26.1 3.7 30 145-174 68-97 (114)
45 3fwu_A Macrophage migration in 20.8 81 0.0028 27.1 3.8 29 146-174 91-119 (133)
46 4dh4_A MIF; trimer, isomerase; 20.3 85 0.0029 25.7 3.7 29 145-173 69-97 (114)
47 1otf_A 4-oxalocrotonate tautom 20.2 87 0.003 22.3 3.3 30 145-174 12-41 (62)
No 1
>1vz6_A Ornithine acetyl-transferase; clavulanic acid, N-acetyl- ornithine, N-acetyl-glutamate, antibiotic; 2.75A {Streptomyces clavuligerus} SCOP: d.154.1.2 PDB: 1vz7_A 1vz8_A
Probab=100.00 E-value=1.6e-159 Score=1219.40 Aligned_cols=385 Identities=36% Similarity=0.550 Sum_probs=361.2
Q ss_pred CCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEeccCCccccchhchHhhcCCCCCeeEEEEecCCccccC
Q 012099 66 PGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAAT 145 (471)
Q Consensus 66 ~g~v~~p~GF~a~g~~aGiK~~g~k~Dlali~se~pa~aAgvFT~N~~~AAPV~~~~~~l~~~~~~ravvvNSGnANA~T 145 (471)
+++++.|+||+++|++||||+++ |+||+||+|+.||.+|||||+|+|+||||+|||++|+ ++++||||||||||||||
T Consensus 3 ~~~~~~p~Gf~a~g~~aGiK~~g-r~Dlali~s~~p~~~AgvFT~N~~~AAPV~~~~~~l~-~g~~rAvvvNSGnANA~T 80 (393)
T 1vz6_A 3 DSTPKTPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA-DGQARGVVVLARNANVAT 80 (393)
T ss_dssp -----CCTTEEEEEECCCSSTTC-CCCEEEEEESSCCEEEEEECCCTTCCHHHHHHHHHTT-TSBCCEEEEEEEECCCSC
T ss_pred CCCCCCCCeEEEEEEEccccCCC-CCCEEEEEeCCCceEEEEeCCCceeeceehHHHhhcc-cCcceEEEECCCCccccc
Confidence 57899999999999999999886 8999999999999999999999999999999999996 468999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEE
Q 012099 146 GDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAV 225 (471)
Q Consensus 146 G~~G~~da~~~~~~~A~~l~~~~~~Vlv~STGVIG~~Lpmdki~~~i~~~~~~L~~~~~~~~~aA~AImTTDt~pK~~~~ 225 (471)
|++|++|+++|++++|+.|||++++|||+||||||+|||||||+++||++...|++ ++|++||+||||||||||++++
T Consensus 81 G~~G~~da~~~~~~~A~~lg~~~~~Vlv~STGVIG~~Lpmdki~~gi~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~ 158 (393)
T 1vz6_A 81 GLEGEENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRV 158 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSCCCCHHHHHHHHTTCCCCSSS--BCHHHHHHHTCSSCSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHHhCCChhhEEEeCcccccCCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHhccCCccEEEEE
Confidence 99999999999999999999999999999999999999999999999999999974 5999999999999999999998
Q ss_pred EEEECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhccCCCCC
Q 012099 226 ESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRS 305 (471)
Q Consensus 226 ~~~~~g~~v~i~GiAKGsGMI~PnMATML~fi~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~ 305 (471)
++ +| |||+|||||||||||||||||+||+|||+|+++.||++|+++|++|||||||||||||||||++||||++|
T Consensus 159 ~~--~g--v~i~GiAKGsGMI~PnMATML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag- 233 (393)
T 1vz6_A 159 SV--GG--ATLVGIAKGVGMLEPDMATLLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAG- 233 (393)
T ss_dssp EE--TT--EEEEEEEECSSSCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEEEEEEE-
T ss_pred EE--CC--EEEEEEEccCccCCCcccceeEEEEecCcCCHHHHHHHHHHHHHhcCCCEeeCCCCchhhhhhheeCCCCC-
Confidence 88 66 99999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCchhHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhH
Q 012099 306 SRISSVDCNEAKQLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRI 385 (471)
Q Consensus 306 ~~i~~~~~~~~~~F~~aL~~v~~~LAk~Iv~DGEGATKli~v~V~GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRI 385 (471)
. ++|+.|+++|++||++||||||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||
T Consensus 234 ~-------~~~~~f~~aL~~v~~~LA~~IvrDGEGATK~i~v~V~GA~s~~~A~~iA~sIa~S~LVKtAi~G~DpNWGRI 306 (393)
T 1vz6_A 234 E-------VDAGEFEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRV 306 (393)
T ss_dssp E-------CCHHHHHHHHHHHHHHHHHHHHHTCTTCSSEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHH
T ss_pred C-------ccHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEEEECCCCHHHHHHHHHHHccCHHHHHHHhcCCCCHHHH
Confidence 1 148899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCC--ccccccceeEEeCCEEEEcCC-CCCCCC---HHHHHHHhhhcCCCCceEEEEEEeCCCCeeEEEEeccCC
Q 012099 386 AAAAGYAG--VSFYQNKLRILLGDSLLMDGG-QPLPFD---RAAAGNYLRKAGETRGTVFIDISVGDGPGSGQAWGCDLS 459 (471)
Q Consensus 386 laAiG~SG--v~fDpekv~I~lgdV~V~~~G-~pl~yD---e~ka~~~l~~~~~~~~ei~I~vdLg~G~~~a~~w~cDLs 459 (471)
+||+||+| ++|||++++|+|++++|+++| .+.+|+ |++++++|+ ++||.|+||||.|++++++||||||
T Consensus 307 laAvG~sg~~~~~d~~~v~i~~g~v~v~~~G~~~~~~~~~~e~~~~~~l~-----~~ei~I~vdLg~G~~~at~wtcDLt 381 (393)
T 1vz6_A 307 AMAIGKCSDDTDIDQERVTIRFGEVEVYPPKARGDQADDALRAAVAEHLR-----GDEVVIGIDLAIADGAFTVYGCDLT 381 (393)
T ss_dssp HHHHHTCTTCTTCCTTTCEEEETTEEEECC-------CHHHHHHHHHHTT-----SSEEEEEEECCSSSEEEEEEEECCC
T ss_pred HhhhccCCCCcccchhheEEEECCEEEEcCCCcCCCCCchhHHHHHHHhC-----CCeEEEEEEeCCCCceEEEEcCCCC
Confidence 99999999 999999999999999999999 888999 999999999 5899999999999999999999999
Q ss_pred cccccccCccCC
Q 012099 460 YDYVKINAEYTT 471 (471)
Q Consensus 460 ~eYV~INa~Y~T 471 (471)
||||+||++|||
T Consensus 382 ~~YV~INadYrt 393 (393)
T 1vz6_A 382 EGYVRLNSEYTT 393 (393)
T ss_dssp HHHHHHHHC---
T ss_pred ccceeeCCcccC
Confidence 999999999997
No 2
>1vra_B Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=100.00 E-value=1.4e-93 Score=683.25 Aligned_cols=214 Identities=45% Similarity=0.748 Sum_probs=208.1
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhccCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 012099 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (471)
Q Consensus 252 TML~fi~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (471)
|||+||+|||+|+++.||++|+++|++|||||||||||||||||++||||++|+++|.. .+++|+.|+++|.+||++||
T Consensus 1 TML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag~~~i~~-~~~~~~~f~~aL~~v~~~LA 79 (215)
T 1vra_B 1 TMLSFVTTDANIDHGHLQGALSAITNETFNRITVDGDTSTNDMVVVMASGLAENETLTP-EHPDWANFYKALQLACEDLA 79 (215)
T ss_dssp CCEEEEEECCCCCHHHHHHHHHHHHHHTGGGBCSSSCCCSSCEEEEEECCTTCCSCCCT-TSTTHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeeCCcCCHHHHHHHHHHHHHhcCCCeeeCCCCchhhHHHhhhCCCCCCCcccC-CChhHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998866 56889999999999999999
Q ss_pred HHHHhcccCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhccCCccccccceeEEeCCEEEE
Q 012099 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLM 411 (471)
Q Consensus 332 k~Iv~DGEGATKli~v~V~GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~SGv~fDpekv~I~lgdV~V~ 411 (471)
||||||||||||||||+|+||+|++||+++||+|++||||||||||+|||||||+||+||+|++|||++++|+|++++|+
T Consensus 80 ~~IvrDGEGATK~i~v~V~GA~s~~~A~~iA~sIa~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~i~~g~v~v~ 159 (215)
T 1vra_B 80 KQIARDGEGATKLIEVEVTGAANDQEAGMVAKQIVGSDLVKTAIYGADANWGRIICAIGYSGCEVNQETIDIAIGPIVTL 159 (215)
T ss_dssp HHHHHTSTTCSCEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHHSSSCCCTTSCEEEETTEEEE
T ss_pred HHHHhcCCCCCEEEEEEEECCCCHHHHHHHHHHHcCCHHHHHHHhcCCCCHHHHHHHcCCCCCccchhheEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCCCc-eEEEEEEeCCCCeeEEEEeccCCcccccccCccCC
Q 012099 412 DGGQPLPFDRAAAGNYLRKAGETRG-TVFIDISVGDGPGSGQAWGCDLSYDYVKINAEYTT 471 (471)
Q Consensus 412 ~~G~pl~yDe~ka~~~l~~~~~~~~-ei~I~vdLg~G~~~a~~w~cDLs~eYV~INa~Y~T 471 (471)
++|.+.+|+|++++++|++ + ||.|+||||.|++++++||||||||||+||++|||
T Consensus 160 ~~G~~~~~~e~~~~~~l~~-----~~ei~I~vdLg~G~~~at~wtcDLt~~YV~INa~Yrt 215 (215)
T 1vra_B 160 KQSEPTGFSEEEATAYLKE-----ADPVKISVNLHIGNGTGKAWGCDLTYDYVRINAGYRT 215 (215)
T ss_dssp ETTEECCCCHHHHHHHHHH-----CSSEEEEEECCSSSEEEEEEEECCCHHHHHHHTTC--
T ss_pred ECCCCCCCCHHHHHHHhCC-----CCEEEEEEEeCCCCceEEEEcCCCCccceeeCCcccC
Confidence 9999999999999999995 7 99999999999999999999999999999999997
No 3
>2v4i_B Glutamate N-acetyltransferase 2 beta chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_D* 2yep_B* 2vzk_B* 2w4n_B* 2yep_F*
Probab=100.00 E-value=8.9e-91 Score=662.18 Aligned_cols=207 Identities=38% Similarity=0.607 Sum_probs=197.1
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhccCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 012099 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (471)
Q Consensus 252 TML~fi~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (471)
|||+||+|||+|+++.||++|+++|++|||||||||||||||||++||||++| + | +++.|+++|++||++||
T Consensus 1 ~ML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag-~-i------~~~~f~~aL~~v~~~LA 72 (213)
T 2v4i_B 1 ALLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANGLAG-E-V------DAGEFEEALHTAALALV 72 (213)
T ss_dssp CCEEEEEECCBCCHHHHHHHHHHHHHHTGGGBCSSSCCCSCCEEEEEEECTTC-B-C------CHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcCCHHHHHHHHHHHHHhcCCCEeeCCCCCchhhhheeeCCCCc-c-c------CHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999998 4 4 68899999999999999
Q ss_pred HHHHhcccCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhccCC--ccccccceeEEeCCEE
Q 012099 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG--VSFYQNKLRILLGDSL 409 (471)
Q Consensus 332 k~Iv~DGEGATKli~v~V~GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~SG--v~fDpekv~I~lgdV~ 409 (471)
||||||||||||||||+|+||+|+++|+++||+|++||||||||||+|||||||+||+||+| ++|||++++|+|++++
T Consensus 73 ~~IvrDGEGATK~i~V~V~GA~s~~~A~~vA~sIa~S~LVKtAi~G~DpNWGRIlaAiG~sg~~~~~d~~~v~i~~g~v~ 152 (213)
T 2v4i_B 73 KDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVE 152 (213)
T ss_dssp HHHHHSSTTCCCEEEEEEEEESSHHHHHHHHHHHHTCHHHHHHHHTTCCCHHHHHHHHHTCTTCTTCCTTTCEEEETTEE
T ss_pred HHHHhcCCCCcEEEEEEEECCCCHHHHHHHHHHHccCHHHHHHHhcCCCCHHHHHhhhccCCCCcccchhheEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred EEcCC-C---CCCCCHHHHHHHhhhcCCCCceEEEEEEeCCCCeeEEEEeccCCcccccccCccCC
Q 012099 410 LMDGG-Q---PLPFDRAAAGNYLRKAGETRGTVFIDISVGDGPGSGQAWGCDLSYDYVKINAEYTT 471 (471)
Q Consensus 410 V~~~G-~---pl~yDe~ka~~~l~~~~~~~~ei~I~vdLg~G~~~a~~w~cDLs~eYV~INa~Y~T 471 (471)
|+++| . |.+|+|++++++|+ ++||.|+||||.|++++++||||||||||+||++|||
T Consensus 153 v~~~G~~~~~~~~~~e~~~~~~l~-----~~ei~I~vdLg~G~~~at~wtcDLt~~YV~INa~Yrt 213 (213)
T 2v4i_B 153 VYPPKARGDQADDALRAAVAEHLR-----GDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSEYTT 213 (213)
T ss_dssp EECC-------CHHHHHHHHHHHH-----SSEEEEEEECCSSSEEEEEEEECCCHHHHHHHHC---
T ss_pred EEeCCCcccCCCCCCHHHHHHHhC-----CCeEEEEEEeCCCCccEEEEcCCCCccceeeCCcccC
Confidence 99999 7 78899999999999 5899999999999999999999999999999999997
No 4
>3it4_B Arginine biosynthesis bifunctional protein ARGJ beta chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_B
Probab=100.00 E-value=1.7e-90 Score=657.51 Aligned_cols=205 Identities=33% Similarity=0.509 Sum_probs=193.1
Q ss_pred chhhhhccCCCCCHHHHHHHHHHHHhcccCceeeCCCCCchhhhhhhccCCCCCccccCCCchhHHHHHHHHHHHHHHHH
Q 012099 252 TMLGVVTTDASVDSDVWRKMVKVAVNRSFNQITVDGDTSTNDTVIALASGLSRSSRISSVDCNEAKQLQACLDAVMQGLA 331 (471)
Q Consensus 252 TML~fi~TDA~i~~~~L~~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~a~~~~i~~~~~~~~~~F~~aL~~v~~~LA 331 (471)
|||+||+|||+|+++.||++|+++|++|||||||||||||||||++||||++|++ +++++|+++|.+||++||
T Consensus 1 TML~fi~TDA~i~~~~Lq~~L~~av~~SFN~ItVDGDtSTNDtvlllAnG~ag~~-------~~~~~f~~aL~~v~~~LA 73 (205)
T 3it4_B 1 TMLCVLTTDAAAEPAALERALRRAAAATFDRLDIDGSCSTNDTVLLLSSGASEIP-------PAQADLDEAVLRVCDDLC 73 (205)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTGGGBCSSSCCCSCCEEEEEECCTTCCC-------CCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCcCCHHHHHHHHHHHHHhcCCCEeeCCCCCchhhhhhhhCCCCCCC-------cCHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999974 267899999999999999
Q ss_pred HHHHhcccCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhccCCccccccceeEEeCCEEEE
Q 012099 332 KSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAGVSFYQNKLRILLGDSLLM 411 (471)
Q Consensus 332 k~Iv~DGEGATKli~v~V~GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~SGv~fDpekv~I~lgdV~V~ 411 (471)
||||||||||||||||+|+||+|+++|+++||+|++||||||||||+|||||||+||+||+|++|||++++|+|++++|+
T Consensus 74 ~~IvrDGEGATK~i~v~V~gA~s~~~A~~iA~~Ia~S~LVKtAi~G~DpNWGRIlaAvG~sg~~~d~~~v~i~~~~v~v~ 153 (205)
T 3it4_B 74 AQLQADAEGVTKRVTVTVTGAATEDDALVAARQIARDSLVKTALFGSDPNWGRVLAAVGMAPITLDPDRISVSFNGAAVC 153 (205)
T ss_dssp HHHHHTCTTCCCEEEEEEEEESSHHHHHHHHHHHHHCHHHHHHHHTTCCCHHHHHHHHTTSSSCCCGGGCEEEETTEEEE
T ss_pred HHHHhccCCCcEEEEEEEeCCCCHHHHHHHHHHHhcCHHHHHHHhcCCCCHHHHHHhhccCCCCcchhheEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHhhhcCCCCceEEEEEEeCCCCeeEEEEeccCCcccccccCccCC
Q 012099 412 DGGQPLPFDRAAAGNYLRKAGETRGTVFIDISVGDGPGSGQAWGCDLSYDYVKINAEYTT 471 (471)
Q Consensus 412 ~~G~pl~yDe~ka~~~l~~~~~~~~ei~I~vdLg~G~~~a~~w~cDLs~eYV~INa~Y~T 471 (471)
++|+|. +++.+. .|+ ++||.|+||||.|++++++||||||||||+||++|||
T Consensus 154 ~~G~~~-~~~~~~--~l~-----~~ei~I~vdLg~G~~~at~wtcDLs~~YV~INa~Yrt 205 (205)
T 3it4_B 154 VHGVGA-PGAREV--DLS-----DADIDITVDLGVGDGQARIRTTDLSHAYVEENSAYSS 205 (205)
T ss_dssp ETTEEC-TTGGGC--CCC-----SSEEEEEEECSSCCEEEEEEEECCCHHHHHHHHC---
T ss_pred ECCCCC-CCHHHH--hcC-----CCeEEEEEEecCCCeeEEEEeCcCCccceeccCccCC
Confidence 999984 344333 288 5899999999999999999999999999999999997
No 5
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=100.00 E-value=1.1e-75 Score=557.11 Aligned_cols=193 Identities=38% Similarity=0.554 Sum_probs=184.4
Q ss_pred CCCCCCCceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEeccCCccccchhchHhhcCCCCCeeEE
Q 012099 55 IFLPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAV 134 (471)
Q Consensus 55 ~~~p~~~~~~~~g~v~~p~GF~a~g~~aGiK~~g~k~Dlali~se~pa~aAgvFT~N~~~AAPV~~~~~~l~~~~~~rav 134 (471)
|-+|++.|..++++++.|+||++++++||||++ |+||+||+||.||.+|||||+|+|+||||+|||++|+.++++|||
T Consensus 16 ~~~~~~~~~~~~~~v~~p~Gf~a~g~~aGiK~~--r~Dlali~s~~p~~aAgVFT~N~~~AAPV~~~r~~l~~~g~~rAv 93 (208)
T 1vra_A 16 INETANVLKLETGSVTSAKGFSAVGIHTGVKRK--RKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQESIAVEGKLQAM 93 (208)
T ss_dssp --CCSCCEECTTCCGGGSTTEEEEEECCSSSSS--SCCEEEEEEEEEEEEEEEEBCCSSCCHHHHHHHHHHHHHSEEEEE
T ss_pred ecCCCCCCccCCCCccCCCeEEEEEEEcCCCCC--CCCEEEEEeCCCceEEEEeCCCceeeceehHHHHhhccCCceEEE
Confidence 568999999999999999999999999999976 789999999999999999999999999999999999623589999
Q ss_pred EEecCCccccCcHHHHHHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHc
Q 012099 135 LINAGQANAATGDAGYQDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAIT 214 (471)
Q Consensus 135 vvNSGnANA~TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~STGVIG~~Lpmdki~~~i~~~~~~L~~~~~~~~~aA~AIm 214 (471)
||||||||||||++|++|+++|++++|+.|||++++|||+||||||+|||||||+++||++...|++ ++|++||+|||
T Consensus 94 vvNSGnANA~TG~~G~~da~~~a~~~A~~lgi~~~~VlvaSTGVIG~~LPmdki~~gi~~l~~~L~~--~~~~~AA~AIM 171 (208)
T 1vra_A 94 IVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLPMDVITNGIRQLKPEATI--EGAHAFNEAIL 171 (208)
T ss_dssp EEEEEECCCSCHHHHHHHHHHHHHHHHHHHTSCGGGEEEEEEEESSCCCCHHHHHHHHHHCCCBSSH--HHHHHHHHHHC
T ss_pred EEccCCccccccHHHHHHHHHHHHHHHHHhCCChhHEEEeCCccccCCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999974 59999999999
Q ss_pred CCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCccc
Q 012099 215 TTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMA 251 (471)
Q Consensus 215 TTDt~pK~~~~~~~~~g~~v~i~GiAKGsGMI~PnMA 251 (471)
|||||||+++++++++|++|||+||||||||||||||
T Consensus 172 TTDT~pK~~~~~~~i~G~~vtI~GiAKGsGMI~PnMA 208 (208)
T 1vra_A 172 TTDTVEKHTCYQTIVNGKTVTVGGVAKGSGMIHPNMA 208 (208)
T ss_dssp SSCSSCCEEEEEEEETTEEEEEEEEEECSSSCCCCBC
T ss_pred cCCCCceEEEEEEEECCEEEEEEEEEeeHhhcCcccC
Confidence 9999999999999999999999999999999999997
No 6
>3it4_A Arginine biosynthesis bifunctional protein ARGJ alpha chain; ornithine acetyltransferase, structural genomics; 1.70A {Mycobacterium tuberculosis} PDB: 3it6_A
Probab=100.00 E-value=4e-74 Score=543.95 Aligned_cols=186 Identities=45% Similarity=0.636 Sum_probs=177.7
Q ss_pred CceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCC-ceEEEEeccCCccccchhchHhhcCCCCCeeEEEEecC
Q 012099 61 PWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVD-AAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAG 139 (471)
Q Consensus 61 ~~~~~~g~v~~p~GF~a~g~~aGiK~~g~k~Dlali~se~p-a~aAgvFT~N~~~AAPV~~~~~~l~~~~~~ravvvNSG 139 (471)
.|...++|+++|+||++++++||||+++ |+||+||+||.| |++|||||+|+|+||||+|||++|+. +++||||||||
T Consensus 8 ~~~~~~ggvt~p~Gf~a~g~~aGiK~~g-r~Dlali~s~~p~~~aAgVFT~N~~~AAPV~~~r~~l~~-g~~rAvvvNSG 85 (199)
T 3it4_A 8 TRLLRAQGVTAPAGFRAAGVAAGIKASG-ALDLALVFNEGPDYAAAGVFTRNQVKAAPVLWTQQVLTT-GRLRAVILNSG 85 (199)
T ss_dssp CEEEESCCTTSSTTEEEEEECCSCSTTC-CCCEEEEEECCSCCBEEEEEBCCSSCCHHHHHHHHHHTT-SBCSEEEEECS
T ss_pred ccccCCCCcccCCeEEEEEEEEecccCC-CCCEEEEEeCCCCeeEEEEECCCcceeccchHHHHHhcc-CceeEEEEcCC
Confidence 4777889999999999999999999886 899999999999 99999999999999999999999975 68999999999
Q ss_pred CccccCcHHHHHHHHHHHHHHHHHhC-----CCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHc
Q 012099 140 QANAATGDAGYQDVVDCANTVAMLLK-----MRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAIT 214 (471)
Q Consensus 140 nANA~TG~~G~~da~~~~~~~A~~l~-----~~~~~Vlv~STGVIG~~Lpmdki~~~i~~~~~~L~~~~~~~~~aA~AIm 214 (471)
|||||||++|++|+++|++++|+.|| |++++|||+||||||+|||||||+++||++...|++++++|++||+|||
T Consensus 86 nANA~TG~~G~~da~~~~~~~A~~lg~~~~~~~~~~Vlv~STGVIG~~Lp~dki~~gi~~l~~~L~~~~~~~~~aA~AIm 165 (199)
T 3it4_A 86 GANACTGPAGFADTHATAEAVAAALSDWGTETGAIEVAVCSTGLIGDRLPMDKLLAGVAHVVHEMHGGLVGGDEAAHAIM 165 (199)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEBSCSSCCCCHHHHHHHHHHHHHHCBSSHHHHHHHHHHTC
T ss_pred CccCCcCHHHHHHHHHHHHHHHHHhCCcccCCChHHEEEeCcccccCCCCHHHHHHhHHHHHHHccccccCHHHHHHHHh
Confidence 99999999999999999999999999 9999999999999999999999999999999999765579999999999
Q ss_pred CCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCccc
Q 012099 215 TTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMA 251 (471)
Q Consensus 215 TTDt~pK~~~~~~~~~g~~v~i~GiAKGsGMI~PnMA 251 (471)
|||||||+++++++ +| |||+||||||||||||||
T Consensus 166 TTDT~pK~~~~~~~-~g--v~I~GiAKGsGMI~PnMA 199 (199)
T 3it4_A 166 TTDNVPKQVALHHH-DN--WTVGGMAKGAGMLAPSLA 199 (199)
T ss_dssp SSCSSCEEEEEECT-TS--CEEEEEEECSSSCCCCBC
T ss_pred ccCCCcEEEEEEec-CC--EEEEEEEeehhhcCcCcC
Confidence 99999999998887 55 999999999999999997
No 7
>2v4i_A Glutamate N-acetyltransferase 2 alpha chain; cytoplasm, acyl enzyme, NTN hydrolase, acyltransferase, ornithine acetyl transferase; 2.2A {Streptomyces clavuligerus} PDB: 2vzk_A* 2w4n_A* 2yep_A*
Probab=100.00 E-value=7.4e-73 Score=525.63 Aligned_cols=173 Identities=34% Similarity=0.496 Sum_probs=166.5
Q ss_pred ccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEeccCCccccchhchHhhcCCCCCeeEEEEecCCccccCcHHHH
Q 012099 71 AAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLINAGQANAATGDAGY 150 (471)
Q Consensus 71 ~p~GF~a~g~~aGiK~~g~k~Dlali~se~pa~aAgvFT~N~~~AAPV~~~~~~l~~~~~~ravvvNSGnANA~TG~~G~ 150 (471)
.|+||++++++||||+++ |+||+||+||.||.+|||||+|+|+||||+|||++|+ ++++|||||||||||||||++|+
T Consensus 1 ~p~Gf~a~g~~aGiK~~~-r~Dlali~~~~p~~~AgVFT~N~~~AAPV~~~r~~l~-~~~~rAvvvNSGnANA~TG~~G~ 78 (173)
T 2v4i_A 1 TPRGFVVHTAPVGLADDG-RDDFTVLASTAPATVSAVFTRSRFAGPSVVLCREAVA-DGQARGVVVLARNANVATGLEGE 78 (173)
T ss_dssp CCTTEEEEEECCCSSTTC-CCCEEEEEESSCEEEEEEECCCTTCCHHHHHHHHHTS-SSBCCEEEEEESCCCCSCHHHHH
T ss_pred CCCeEEEEEEEecccCCC-CCCEEEEEeCCCceEEEEeCCCceeeceehHHHhhcc-cCceEEEEEcCCCccccccHHHH
Confidence 489999999999999886 8999999999999999999999999999999999997 46899999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCcEEEeccccCCcccChHHHHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCccEEEEEEEEC
Q 012099 151 QDVVDCANTVAMLLKMRSEEVLIESTGVIGQRIKKDALLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSKSVAVESQVG 230 (471)
Q Consensus 151 ~da~~~~~~~A~~l~~~~~~Vlv~STGVIG~~Lpmdki~~~i~~~~~~L~~~~~~~~~aA~AImTTDt~pK~~~~~~~~~ 230 (471)
+|+++|++++|+.|||++++|||+||||||+|||||||+++||++...|+. ++|++||+||||||||||++++++ +
T Consensus 79 ~da~~~~~~~A~~lg~~~~~Vlv~STGVIG~~Lp~dki~~gi~~~~~~l~~--~~~~~aA~AImTTDt~pK~~~~~~--~ 154 (173)
T 2v4i_A 79 ENAREVREAVARALGLPEGEMLIASTGVIGRQYPMESIREHLKTLEWPAGE--GGFDRAARAIMTTDTRPKEVRVSV--G 154 (173)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEEESCSSCCCCHHHHHHHHTTCCCCSSC--BCHHHHHHHHCSSCSSCEEEEEEE--T
T ss_pred HHHHHHHHHHHHHhCCCchhEEEecCcccCcCCCHHHHHHHHHHHHHhccc--cCHHHHHHHHhccCCceEEEEEEE--C
Confidence 999999999999999999999999999999999999999999999999974 599999999999999999999888 6
Q ss_pred CeEEEEeEEeccCCcCCCccc
Q 012099 231 GTYIRVGGMAKGSGMIHPNMA 251 (471)
Q Consensus 231 g~~v~i~GiAKGsGMI~PnMA 251 (471)
| |||+||||||||||||||
T Consensus 155 g--v~i~GiAKGsGMI~PnMA 173 (173)
T 2v4i_A 155 G--ATLVGIAKGVGMLEPDMA 173 (173)
T ss_dssp T--EEEEEEEECSSSCCCCCC
T ss_pred C--EEEEEEEeEhhhcCcCcC
Confidence 6 999999999999999997
No 8
>2kua_A BCL-2-like protein 10; BOO, DIVA, apoptosis, BH3-only, membrane, mitochondri nucleus, transmembrane; NMR {Mus musculus}
Probab=59.26 E-value=6.1 Score=36.23 Aligned_cols=33 Identities=15% Similarity=0.450 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHhhcchhhhhhhhCC--CCChhhHhhhhccC
Q 012099 354 SEAEAAKIARSVASSSLVKAAVYGR--DPNWGRIAAAAGYA 392 (471)
Q Consensus 354 s~~~A~~iArsIa~S~LVKtAi~G~--DpNWGRIlaAiG~S 392 (471)
+..+|..+-.+|+.. +|.. ..|||||++-.-=.
T Consensus 68 ~~~~a~~~f~~Va~e------lF~ddg~iNWGRIVaLfaF~ 102 (170)
T 2kua_A 68 SRGNRLELVKQMADK------LLSKDQDFSWSQLVMLLAFA 102 (170)
T ss_dssp TTSCHHHHHHHHHHH------SCCSSSCCCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHH------HhccCCCCCHHHHHHHHHHH
Confidence 666777776777655 4554 79999999876433
No 9
>1r2d_A Apoptosis regulator BCL-X; monomeric, alpha-helical; 1.95A {Homo sapiens} SCOP: f.1.4.1 PDB: 2b48_A 1r2i_A 1r2h_A 1r2g_A 1r2e_A 1bxl_A 1lxl_A 1maz_A 3cva_X 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 2lp8_A* 2lpc_A
Probab=56.10 E-value=2.2 Score=40.88 Aligned_cols=19 Identities=37% Similarity=0.837 Sum_probs=13.7
Q ss_pred hhCCCCChhhHhhhhccCC
Q 012099 375 VYGRDPNWGRIAAAAGYAG 393 (471)
Q Consensus 375 i~G~DpNWGRIlaAiG~SG 393 (471)
||....|||||++...-+|
T Consensus 130 lF~DGINWGRIVaLfaF~g 148 (218)
T 1r2d_A 130 LFRDGVNWGRIVAFFSFGG 148 (218)
T ss_dssp GGTTCCCHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHH
Confidence 4555599999998875443
No 10
>2y6w_A BCL-2-like protein 2; apoptosis; HET: PGE; 2.00A {Homo sapiens} PDB: 1mk3_A 1zy3_A
Probab=53.68 E-value=8.5 Score=35.31 Aligned_cols=15 Identities=40% Similarity=0.833 Sum_probs=11.5
Q ss_pred hCCCCChhhHhhhhc
Q 012099 376 YGRDPNWGRIAAAAG 390 (471)
Q Consensus 376 ~G~DpNWGRIlaAiG 390 (471)
|...+|||||++...
T Consensus 100 F~dGinWGRIVaLfa 114 (177)
T 2y6w_A 100 FQGGPNWGRLVAFFV 114 (177)
T ss_dssp HHCCCHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHH
Confidence 444599999998774
No 11
>3qbr_A SJA, sjchgc06286 protein; helical bundle, BCL-2-like fold, apoptosis; HET: NHE; 2.60A {Schistosoma japonicum}
Probab=53.65 E-value=7.7 Score=36.18 Aligned_cols=34 Identities=18% Similarity=0.392 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhcc
Q 012099 351 GANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGY 391 (471)
Q Consensus 351 GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~ 391 (471)
|--+++.|+..=..|++. +| ...|||||++-..-
T Consensus 95 ~~lt~~tA~~~F~~Va~e------LF-DGiNWGRIVaLfaF 128 (179)
T 3qbr_A 95 KPVDKTALEIFYLEILNG------LF-EKLNWGRIVAMFAF 128 (179)
T ss_dssp SCCCHHHHHHHHHHHHHH------HT-SSCCHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHHHH------Hh-CCCCHHHHHHHHHH
Confidence 344677888888888776 45 24999999986643
No 12
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=51.64 E-value=8.8 Score=34.41 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHhhcchhhhhhhhC-CCCChhhHhhhhccCC
Q 012099 353 NSEAEAAKIARSVASSSLVKAAVYG-RDPNWGRIAAAAGYAG 393 (471)
Q Consensus 353 ~s~~~A~~iArsIa~S~LVKtAi~G-~DpNWGRIlaAiG~SG 393 (471)
.+++.|+..-.+|+.. +|. +.+|||||++...-+|
T Consensus 67 ~~~~~a~~~f~~Va~e------lF~dg~inWGRIVal~~F~g 102 (157)
T 2vof_A 67 ESIDTARIIFNQVMEK------EFEDGIINWGRIVTIFAFGG 102 (157)
T ss_dssp CSHHHHHHHHHHHHHH------HHTTCCCCHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHH------HhcCCCCCHHHHHHHHHHHH
Confidence 5677887766666655 333 4589999998876444
No 13
>1b65_A DMPA, protein (aminopeptidase); hydrolase, peptide degradation, NTN hydrolase; 1.82A {Ochrobactrum anthropi} SCOP: d.154.1.1
Probab=49.50 E-value=22 Score=36.57 Aligned_cols=220 Identities=15% Similarity=0.214 Sum_probs=112.1
Q ss_pred CCCCCceecCCCccccCceEEeeeEeecccC--------CCCCcEEEEEeCCC-----ceEEEEeccCCccccc-hhchH
Q 012099 57 LPEGPWKQIPGGVTAAEGFKAAGIYAGVRAK--------GEKPDVALVLCDVD-----AAAAGAFTTNVVAAAP-VVYCK 122 (471)
Q Consensus 57 ~p~~~~~~~~g~v~~p~GF~a~g~~aGiK~~--------g~k~Dlali~se~p-----a~aAgvFT~N~~~AAP-V~~~~ 122 (471)
+|.++.+ .+|-.+|++++...- ... ..+--+.+|..+.. -..||+|-+|-|--+| ..+.|
T Consensus 21 ~~~Gp~n----~ITDV~GV~VGh~t~--~~g~~~~~~~~~~~TGvTvIlp~~g~~~~~~~~Agv~V~nG~G~~~G~~~~r 94 (375)
T 1b65_A 21 GVTGPYN----AITDVDGVGVGFQTI--IENEPRPGRKRPARSGVTAILPHMQSETPVPVYAGVHRFNGNGEMTGTHWIE 94 (375)
T ss_dssp SCBCTTS----SGGGSTTCEEEEEEE--ECSSCCTTCSSCCEEEEEEEETTTTCSSCCCEEEEEEEEEESSCBCSHHHHH
T ss_pred CCCCCCC----ccccCCCceEEeeEC--cCCCccccccCCCCcceEEEEeCCCCcccCCeeEEEEecCCCCcCCCcceee
Confidence 5666664 688899999986553 110 11346788888752 4678899999865565 34566
Q ss_pred hh--cCCCCCeeEEEEecCCccccCcHHHHHHHHHHHHHHHHHh-CC-C-----CCcEEEecc--ccCCc----ccChHH
Q 012099 123 KT--LDSSKTARAVLINAGQANAATGDAGYQDVVDCANTVAMLL-KM-R-----SEEVLIEST--GVIGQ----RIKKDA 187 (471)
Q Consensus 123 ~~--l~~~~~~ravvvNSGnANA~TG~~G~~da~~~~~~~A~~l-~~-~-----~~~Vlv~ST--GVIG~----~Lpmdk 187 (471)
|. |+. +|++-.|-| -|+ .+.-+.+.+.+.- ++ + .-.-+|+-+ |..|. +..-+-
T Consensus 95 EtglL~~-----pIvLTggsa------~Gl-aa~gv~~~l~e~~~g~~~~~~~~~~vPIV~e~fDl~lndi~~~~p~~~~ 162 (375)
T 1b65_A 95 DGGYFLG-----PVVITNTHG------IGM-AHHATVRWMVDRYASTYQTDDFLWIMPVVAETYDGALNDINGFPVTEAD 162 (375)
T ss_dssp HHCEECS-----CEEEEEGGG------HHH-HHHHHHHHHHHHTHHHHSSSSCCCCCCEEEEECCTTTSCGGGCCCCHHH
T ss_pred ccccccC-----CEEEECCcH------HHH-HHHHHHHHHHHhCCCCccccccCcccCeeeEeecCCCCCcCCCCCCHHH
Confidence 63 332 565544442 455 4444444444431 11 1 111122211 22221 222222
Q ss_pred HHhhHHHHHhhcCCCCccHHHHHHHHcCCCCCcc----EEEEEEEECCeEEEEeEEec---c-------CC-----cCC-
Q 012099 188 LLNSLPKLVNSLSSSTEGADSAAVAITTTDLVSK----SVAVESQVGGTYIRVGGMAK---G-------SG-----MIH- 247 (471)
Q Consensus 188 i~~~i~~~~~~L~~~~~~~~~aA~AImTTDt~pK----~~~~~~~~~g~~v~i~GiAK---G-------sG-----MI~- 247 (471)
..+++..+... +-.++.--|-.. ||+=. -| ++++.++.+++.+||+.+.- | +| .+.
T Consensus 163 g~~A~~~A~~~--~v~eG~VGAGtG-a~~~~-~KGGiGtASr~v~~~~~~~tVGALV~~N~G~~~~~~iaG~~~G~~l~~ 238 (375)
T 1b65_A 163 VRKALDNVASG--PVQEGNCGGGTG-MITYG-FKGGTGTASRVVEFGGRSFTIGALVQANHGQRDWLTIAGVPVGQHMRD 238 (375)
T ss_dssp HHHHHHTCBSS--CCCCBSCGGGTT-CEETT-EECEEEEEEEEEEETTEEEEEEEEEEECCCCGGGCCBTTBCHHHHCCT
T ss_pred HHHHHHhccCC--CCcccCcccccC-cccCC-CccccEeeEEEeccCCCCeEEEEEEEecCCCcccceeccccccccccc
Confidence 22222221100 000010001111 11111 12 25566666666788877631 1 11 121
Q ss_pred -------CcccchhhhhccCCCCCHHHHHHHHHHHHh---cccCceeeCCCCCchhhhhhhccCC
Q 012099 248 -------PNMATMLGVVTTDASVDSDVWRKMVKVAVN---RSFNQITVDGDTSTNDTVIALASGL 302 (471)
Q Consensus 248 -------PnMATML~fi~TDA~i~~~~L~~~L~~av~---~SFN~ItVDGDtSTNDtvlllAnG~ 302 (471)
|...|.+.+|.|||++++..|+++-+++-+ |+=.-. + .+--|+++.|++|.
T Consensus 239 ~~~~~~~~~~gTtI~VVATDApL~~~Ql~RlA~rA~~GlAR~g~p~---~-~~dGD~vfAfSTg~ 299 (375)
T 1b65_A 239 GTPQSQLQERGSIIVVLATDLPLMPHQLKRLARRASIGIGRNGTPG---G-NNSGDIFIAFSTAN 299 (375)
T ss_dssp TCHHHHC----CEEEEEEECSCCCHHHHHHHHHTHHHHHHTTTCCC---C-TTCEEEEEEEECCS
T ss_pred ccccccccCCCCEEEEEEeCCcCCHHHHHHHHhhcccceeeecCCC---C-CCCCCEEEEEecCC
Confidence 234799999999999999999999888754 332222 1 22248999999996
No 14
>3n2w_A Beta-peptidyl aminopeptidase; NTN hydrolase, alpha-beta-BETA-alpha sandwich, beta-aminopep beta-peptide, hydrolase; HET: GOL; 1.45A {Sphingosinicella xenopeptidilytica} SCOP: d.154.1.0 PDB: 3n33_A* 3ndv_A* 3nfb_A* 3n5i_A
Probab=49.03 E-value=11 Score=38.89 Aligned_cols=51 Identities=18% Similarity=0.252 Sum_probs=36.2
Q ss_pred cchhhhhccCCCCCHHHHHHHHHHHHhcccCc-eeeCCCCCchhhhhhhccCCC
Q 012099 251 ATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQ-ITVDGDTSTNDTVIALASGLS 303 (471)
Q Consensus 251 ATML~fi~TDA~i~~~~L~~~L~~av~~SFN~-ItVDGDtSTNDtvlllAnG~a 303 (471)
.|.+.+|.|||++++..|+++-+++-+- +-| |+.=+ ..=-|+++.||+|..
T Consensus 249 gTtI~VVATDApL~~~Ql~RlA~rA~~G-lAR~g~p~~-~~dGD~vfAfSTg~~ 300 (373)
T 3n2w_A 249 NSLLIVIATDAPLMPHQLERMARRAALG-VGRNGSTAG-ALSGEFALAFSTSHV 300 (373)
T ss_dssp -CEEEEEEECSCCCHHHHHHHHHTHHHH-HHHTTCCCC-TTCCEEEEEEEEEEE
T ss_pred CCEEEEEEeCCcCCHHHHHHHHHhhccC-cceeccCCC-CCCcCeEEEEecCCC
Confidence 7999999999999999999998887652 211 22112 222489999999853
No 15
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=48.13 E-value=18 Score=29.65 Aligned_cols=61 Identities=18% Similarity=0.101 Sum_probs=46.3
Q ss_pred HcCCCCCccEEEEEEEECCeEEEEeEEeccCCcCCCcccchhhhhccCCCCCHHHHHHHHHHHHhcccCc-eeeCCCCCc
Q 012099 213 ITTTDLVSKSVAVESQVGGTYIRVGGMAKGSGMIHPNMATMLGVVTTDASVDSDVWRKMVKVAVNRSFNQ-ITVDGDTST 291 (471)
Q Consensus 213 ImTTDt~pK~~~~~~~~~g~~v~i~GiAKGsGMI~PnMATML~fi~TDA~i~~~~L~~~L~~av~~SFN~-ItVDGDtST 291 (471)
|.|||+.| |.++...|+.+|.-- --..+|+++..+|-+.-=|. |.||=|+|+
T Consensus 9 itTT~~i~----------G~~I~~lGiV~G~~v-----------------aR~~A~~rm~e~A~~lGAnAVVgvr~d~~~ 61 (81)
T 2jz7_A 9 ITTADEIP----------GLQLYSLGIASTISD-----------------NVDEIVENLRKQVKAKGGMGLIAFRITCAD 61 (81)
T ss_dssp EESSCCCT----------TSCCEEEEEECCCCS-----------------SHHHHHHHHHHHHHHTTCCEEECCCCCCCS
T ss_pred EEeCCCcC----------CcEEEEEEEEEEEEe-----------------hHHHHHHHHHHHHHHcCCCEEEEEEEEccc
Confidence 45778765 556678999999863 33458999999998888887 467888888
Q ss_pred hhhhhhhccCCC
Q 012099 292 NDTVIALASGLS 303 (471)
Q Consensus 292 NDtvlllAnG~a 303 (471)
+ .++|+|-+
T Consensus 62 g---eV~ayGTA 70 (81)
T 2jz7_A 62 G---KFLGYGTI 70 (81)
T ss_dssp S---SCCCCEEE
T ss_pred c---EEEEEEEE
Confidence 4 77888865
No 16
>2wh6_A Early antigen protein R; mitochondrion, early protein, transmembrane, viral protein,; 1.50A {Human herpesvirus 4} PDB: 2v6q_A 2xpx_A 1q59_A
Probab=47.78 E-value=6 Score=36.74 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=16.9
Q ss_pred HHHHHHHHhhcchhhhhhhhCC-CCChhhHhhhh
Q 012099 357 EAAKIARSVASSSLVKAAVYGR-DPNWGRIAAAA 389 (471)
Q Consensus 357 ~A~~iArsIa~S~LVKtAi~G~-DpNWGRIlaAi 389 (471)
.|...=.+||+. ||.. ++|||||++--
T Consensus 91 ta~~~F~~VA~E------LF~dG~INWGRIVALf 118 (173)
T 2wh6_A 91 HVDLDFNSVFLE------IFHRGDPSLGRALAWM 118 (173)
T ss_dssp SHHHHHHHHHHH------HHSSSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHH------HHhCCCCCcceehhhh
Confidence 344444445444 4544 68999999866
No 17
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=45.45 E-value=7 Score=34.41 Aligned_cols=19 Identities=37% Similarity=0.816 Sum_probs=13.7
Q ss_pred hhCCCCChhhHhhhhccCC
Q 012099 375 VYGRDPNWGRIAAAAGYAG 393 (471)
Q Consensus 375 i~G~DpNWGRIlaAiG~SG 393 (471)
+|....|||||++...=+|
T Consensus 75 lF~dGinWGRIValf~F~g 93 (144)
T 2w3l_A 75 LFRDGVNWGRIVAFFEFGG 93 (144)
T ss_dssp HTTTCCCHHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHH
Confidence 4555599999998875443
No 18
>1k3k_A Functional anti-apoptotic factor VBCL-2 homolog; solution structure, apoptosis; NMR {Human herpesvirus 8} SCOP: f.1.4.1
Probab=43.71 E-value=11 Score=34.21 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=18.6
Q ss_pred HHHHHHHHHHhhcchhhhhhhhC-CCCChhhHhhhhccC
Q 012099 355 EAEAAKIARSVASSSLVKAAVYG-RDPNWGRIAAAAGYA 392 (471)
Q Consensus 355 ~~~A~~iArsIa~S~LVKtAi~G-~DpNWGRIlaAiG~S 392 (471)
.+++...=..|+.. +|. +.+|||||++-..=+
T Consensus 62 ~~~~~~~F~~Va~e------lF~DG~iNWGRIVaLfaF~ 94 (158)
T 1k3k_A 62 STTGIDQLGLSMLQ------VSGDGNMNWGRALAILTFG 94 (158)
T ss_dssp HHHHHHHHHTHHHH------HCSSCSCCHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH------HhcCCCCCHHHHHHHHHHH
Confidence 33444444444433 454 348999999876543
No 19
>3axg_A Endotype 6-aminohexanoat-oligomer hydrolase; nylon oligomer; 2.00A {Agromyces}
Probab=43.65 E-value=24 Score=36.12 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=60.8
Q ss_pred CCCCCceecCCCccccCceEEeeeEeecccCCCCCcEEEEEeCCCceEEEEeccCCccccchhchHhhcCCCCCeeEEEE
Q 012099 57 LPEGPWKQIPGGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDVDAAAAGAFTTNVVAAAPVVYCKKTLDSSKTARAVLI 136 (471)
Q Consensus 57 ~p~~~~~~~~g~v~~p~GF~a~g~~aGiK~~g~k~Dlali~se~pa~aAgvFT~N~~~AAPV~~~~~~l~~~~~~ravvv 136 (471)
+|.++++ .+|-.+|++++...-+ . .+--+.+|..+.+ ..|||+-+|-+.. +|+.+ .++.+|++
T Consensus 44 ~~~Gp~N----~ITDV~GV~VGh~td~---~-~~TGvTvIlp~~g-~~AgvdVrgG~pg-----tre~v---e~v~aIvL 106 (355)
T 3axg_A 44 RSTGREM----LRFDFPGVSIGAAHYE---E-GPTGATVIHIPAG-ARTAVDARGGAVG-----LSGGY---DFNHAICL 106 (355)
T ss_dssp ECCCSEE----EECCCTTCEEEEEEET---T-TTEEEEEEEEEEE-EEEEEEECSSSCC-----EECCC---SEEEEEEE
T ss_pred cCCCCCC----ccccCCCceEeeeecC---C-CCceEEEEEcCCC-CEEEEEeecCCCc-----cccce---eecccEEE
Confidence 6777776 5778889999977632 2 2567889998766 6788999997655 35534 36788988
Q ss_pred ecCCccccCcHHHHHHHHHHHHHHHHHhC
Q 012099 137 NAGQANAATGDAGYQDVVDCANTVAMLLK 165 (471)
Q Consensus 137 NSGnANA~TG~~G~~da~~~~~~~A~~l~ 165 (471)
--|-| -|+..+.-+.+.+.+.-+
T Consensus 107 Tggsa------~GL~Aa~Gv~~~l~e~~g 129 (355)
T 3axg_A 107 AGGAS------YGLEAGAGVSGALLERLE 129 (355)
T ss_dssp ESSGG------GGGHHHHHHHHHHHHHTT
T ss_pred eCCch------hhHHHHHHHHHHHHHcCC
Confidence 76664 566666666777766644
No 20
>2ims_A Apoptosis regulator BAK; dimer; 1.48A {Homo sapiens} PDB: 2imt_A 2jcn_A 2yv6_A 3qbr_B* 2xpx_B 2jby_B 2voh_B*
Probab=42.95 E-value=14 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.530 Sum_probs=22.0
Q ss_pred CHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhccCC
Q 012099 354 SEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG 393 (471)
Q Consensus 354 s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~SG 393 (471)
+.+.|...=.+|+.. +|....|||||++...-+|
T Consensus 88 ~~~~~~~~f~~Va~e------lF~dGinWGRIVal~~F~g 121 (171)
T 2ims_A 88 TAENAYEYFTKIATS------LFESGINWGRVVALLGFGY 121 (171)
T ss_dssp SHHHHHHHHHHHHHH------HTTTCCCHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHH------HccCCCCHHHHHHHHHHHH
Confidence 344566655666655 3444599999998876544
No 21
>3sp7_A BCL-2-like protein 1; apoptosis regulator-inhibitor complex; HET: 03B; 1.40A {Homo sapiens} PDB: 2lp8_A* 2lpc_A 1ysg_A* 1ysi_A* 1ysn_A* 2o1y_A* 2yxj_A* 3pl7_A 3qkd_A* 1g5j_A 4ehr_A* 3spf_A* 2pon_B 3r85_A 2p1l_A 4a1u_A* 2yj1_A 2yq7_A 2yq6_A 3fdm_A ...
Probab=42.86 E-value=8 Score=35.47 Aligned_cols=17 Identities=35% Similarity=0.796 Sum_probs=12.3
Q ss_pred hhCCCCChhhHhhhhcc
Q 012099 375 VYGRDPNWGRIAAAAGY 391 (471)
Q Consensus 375 i~G~DpNWGRIlaAiG~ 391 (471)
+|...+|||||++-.--
T Consensus 93 lF~dGinWGRIVaLfaF 109 (172)
T 3sp7_A 93 LFRDGVNWGRIVAFFSF 109 (172)
T ss_dssp HTTTCCCHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHH
Confidence 45556999999986543
No 22
>3s3u_A Cysteine transferase; autoproteolytic, carbapenem, biosynthesis, DOM-fold, amidohy transferase; 1.60A {Streptomyces cattleya} PDB: 3tm1_A 3tm2_A*
Probab=41.52 E-value=17 Score=37.95 Aligned_cols=83 Identities=23% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCccccCceEEeeeEeecccCCCCCcEEEEEeCC-CceEEEEeccCCccccchhchHh--hcCC---CCCeeEEEEecCC
Q 012099 67 GGVTAAEGFKAAGIYAGVRAKGEKPDVALVLCDV-DAAAAGAFTTNVVAAAPVVYCKK--TLDS---SKTARAVLINAGQ 140 (471)
Q Consensus 67 g~v~~p~GF~a~g~~aGiK~~g~k~Dlali~se~-pa~aAgvFT~N~~~AAPV~~~~~--~l~~---~~~~ravvvNSGn 140 (471)
+.+|-.+|++++...- ...+.+--+.+|.++. ++ +|+|==+. .+| .+|| +|.. -.++.|||+--|-
T Consensus 53 n~ITDV~Gi~VGha~~--~~~~~~TG~TVIl~~~~ga-~a~vdvrG---ggP--gtRETdLL~p~~~v~~v~aIvLtGGS 124 (419)
T 3s3u_A 53 NGLTDVPGVRVGHAGR--TGDGWLTGVTVVLAPPGGA-VAAVDVRG---GGP--GTRETDALDPRNLVQTIDAVVLTGGS 124 (419)
T ss_dssp SSGGGSTTCEEEEEEE--EETTEEEEEEEEECCTTCB-EEEEEEES---CCS--CEESCGGGSTTSSCCCBSEEEEESSH
T ss_pred CccccCCCcEEeeeec--cCCCCCcceEEEEeCCCCc-EEEEEecC---Ccc--cccchhhcCccccccccceEEEeCcc
Confidence 4788889999997652 1110123578999987 54 45543333 466 4555 4442 1478899886665
Q ss_pred ccccCcHHHHHHHHHHHHHHHHH
Q 012099 141 ANAATGDAGYQDVVDCANTVAML 163 (471)
Q Consensus 141 ANA~TG~~G~~da~~~~~~~A~~ 163 (471)
| -|++.+.-+.+.+.|.
T Consensus 125 A------fGL~Aa~GVm~~L~e~ 141 (419)
T 3s3u_A 125 A------FGLDAAGGVAAWLEEQ 141 (419)
T ss_dssp H------HHTHHHHHHHHHHHHT
T ss_pred h------hhHHHHHHHHHHHHHh
Confidence 4 7888888888888654
No 23
>1o0l_A Apoptosis regulator BCL-W; helical bundle, binding groove, BH3; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=40.40 E-value=8.9 Score=35.40 Aligned_cols=17 Identities=35% Similarity=0.870 Sum_probs=12.7
Q ss_pred hhCCCCChhhHhhhhcc
Q 012099 375 VYGRDPNWGRIAAAAGY 391 (471)
Q Consensus 375 i~G~DpNWGRIlaAiG~ 391 (471)
+|....|||||++...-
T Consensus 91 lF~dGinWGRIValfaF 107 (188)
T 1o0l_A 91 LFQGGPNWGRLVAFFVF 107 (188)
T ss_dssp HSSSCCCHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHH
Confidence 45556999999988743
No 24
>2drh_A PH0078 protein, 361AA long hypothetical D-aminopeptidase; structural genomics, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=38.42 E-value=7.3 Score=39.96 Aligned_cols=215 Identities=16% Similarity=0.252 Sum_probs=106.3
Q ss_pred CCccccCceEEeeeE--eeccc--CC---CCCcEEEEEeCCC-----ceEEEEeccCCcc-ccchhchHhh--cCCCCCe
Q 012099 67 GGVTAAEGFKAAGIY--AGVRA--KG---EKPDVALVLCDVD-----AAAAGAFTTNVVA-AAPVVYCKKT--LDSSKTA 131 (471)
Q Consensus 67 g~v~~p~GF~a~g~~--aGiK~--~g---~k~Dlali~se~p-----a~aAgvFT~N~~~-AAPV~~~~~~--l~~~~~~ 131 (471)
+.+|-.+|++++... -+-.+ .+ .+--+.+|..+.+ -..||+|-+|-+. ..=..|.||. |+
T Consensus 19 n~ITDV~GV~VGh~t~~~~~~~~~~~~~~~~TGvTvIlp~~g~~~~~~~~Agv~V~nG~g~~~G~~q~rE~glL~----- 93 (361)
T 2drh_A 19 NKITDVKGVKVGHVTLIKGKGKLIPGKGPVRTGVTAILPHEGNIYKEKVLAGAFVMNGYSKPVGLIQLWELGTIE----- 93 (361)
T ss_dssp CSGGGSTTCEEEEEEEEECCSSCBTTTBCEEEEEEEEESSSSCTTTEEEEEEEEEEEECSCCBSHHHHHHHCEEC-----
T ss_pred CccccCCCceEeeeEccCCCccccccCCCCCceeEEEEeCCCCcccCceeEEEEccCCCCCCCccceeecccccC-----
Confidence 368899999998665 22100 00 1245788888755 2678899999653 1123445663 33
Q ss_pred eEEEEecCCccccCcHHHHHHHHHHHHHHHHHh---CCCC--CcEEEecc--ccCCc----ccChHHHHhhHHHHHhhcC
Q 012099 132 RAVLINAGQANAATGDAGYQDVVDCANTVAMLL---KMRS--EEVLIEST--GVIGQ----RIKKDALLNSLPKLVNSLS 200 (471)
Q Consensus 132 ravvvNSGnANA~TG~~G~~da~~~~~~~A~~l---~~~~--~~Vlv~ST--GVIG~----~Lpmdki~~~i~~~~~~L~ 200 (471)
.+|++-.|-| -|+ .+.-+.+.+.+.- |.+- -.-+|+.+ |..|. +..-+-..+++..+....
T Consensus 94 ~pIvLTggsa------~Gl-aa~gv~~~l~e~~~~~G~~~~~~vPIV~e~fDl~lnd~~~~~p~~~~g~~A~~~A~~~v- 165 (361)
T 2drh_A 94 TPIILTNTLS------IGT-AVEGLLDYILEENEDIGVTTGSVNPLVLECNDSYLNDIRGRHVKREHVVEAIKRADEDF- 165 (361)
T ss_dssp SCEEEEEGGG------HHH-HHHHHHHHHHHHCTTBTTTBCCCCCEEEEECCTTTSCGGGCCCCHHHHHHHHHHCBSSC-
T ss_pred CCEEEeCccH------HHH-HHHHHHHHHHHcCCCCCccccccccccceeecCcCCCCCCCCCCHHHHHHHHHhcCCcc-
Confidence 1565544442 455 5555555555543 2221 11133333 11121 122222222222221110
Q ss_pred CCCccHHHHHHHHcCCCCCcc----EEEEEEEECCeEEEEeEEec---c-------CC-----cC-------CCcccchh
Q 012099 201 SSTEGADSAAVAITTTDLVSK----SVAVESQVGGTYIRVGGMAK---G-------SG-----MI-------HPNMATML 254 (471)
Q Consensus 201 ~~~~~~~~aA~AImTTDt~pK----~~~~~~~~~g~~v~i~GiAK---G-------sG-----MI-------~PnMATML 254 (471)
.++.--|-.. ||+=.+ | ++++.++.+++.+||+.+.- | .| ++ .|...|.+
T Consensus 166 --~eG~VGAGtG-a~~~~~-KGGiGtASr~~~~~~~~~tVGALV~~N~G~~~~l~~~G~~~G~~l~~~~~~~~~~~nTtI 241 (361)
T 2drh_A 166 --EEGAVGAGTG-MSAFEF-KGGIGSASRIVEIEGKKYTVGALVLSNFGRREDLTIAGVPVGLELKNWPGRGGEGKGSII 241 (361)
T ss_dssp --CCBSSGGGTT-CEETTE-ECEEEEEEEEEESSSCEEEEEEEEEECCCCGGGCCBTTBCHHHHTTTSSCCC-----CEE
T ss_pred --cccCcCcccC-hhhccC-CCccEeeEEEeecCCCCeEEEEEEEecCCCccceEECCEEccccccccccccccCCCCEE
Confidence 0011011111 111111 2 24455555555677776531 1 11 01 14568999
Q ss_pred hhhccCCCCCHHHHHHHHHHHHh---cccCceeeCCCCCchhhhhhhccCC
Q 012099 255 GVVTTDASVDSDVWRKMVKVAVN---RSFNQITVDGDTSTNDTVIALASGL 302 (471)
Q Consensus 255 ~fi~TDA~i~~~~L~~~L~~av~---~SFN~ItVDGDtSTNDtvlllAnG~ 302 (471)
.+|.|||++++..|+++-+++-+ |+=.-. + .+--|+++.|++|.
T Consensus 242 ~VVATDApL~~~Ql~RlA~rA~~GlAR~g~p~---~-~~dGD~vfAfSTg~ 288 (361)
T 2drh_A 242 MIIATDAPLTGRQLNRVAKRAIVGLARTGGYA---Y-NGSGDIAVAFSTAN 288 (361)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHHHHTTCCC---C-TTCEEEEEEEEEEE
T ss_pred EEEEeCCcCCHHHHHHHHhhcccceeecccCC---C-CCCCCeEEEEeccc
Confidence 99999999999999999888764 332222 2 23358999999995
No 25
>4aq3_A Apoptosis regulator BCL-2, BCL-2-like protein 1; chimera; HET: 398; 2.40A {Homo sapiens} PDB: 1g5m_A 1gjh_A 1ysw_A* 2o21_A* 2o22_A*
Probab=38.01 E-value=26 Score=31.99 Aligned_cols=15 Identities=40% Similarity=0.722 Sum_probs=10.8
Q ss_pred hCCCCChhhHhhhhc
Q 012099 376 YGRDPNWGRIAAAAG 390 (471)
Q Consensus 376 ~G~DpNWGRIlaAiG 390 (471)
|....|||||++-..
T Consensus 100 F~dGiNWGRIVaLfa 114 (169)
T 4aq3_A 100 FRDGVNWGRIVAFFE 114 (169)
T ss_dssp TTTCCCHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHH
Confidence 434469999998664
No 26
>1ohu_A Apoptosis regulator CED-9; BCL-2 family; 2.03A {Caenorhabditis elegans} SCOP: f.1.4.1 PDB: 1ty4_A
Probab=36.75 E-value=20 Score=32.86 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=10.5
Q ss_pred CCCChhhHhhhhcc
Q 012099 378 RDPNWGRIAAAAGY 391 (471)
Q Consensus 378 ~DpNWGRIlaAiG~ 391 (471)
...|||||++-.-=
T Consensus 97 dginWGRIVaLfaF 110 (175)
T 1ohu_A 97 SPMSYGRLIGLISF 110 (175)
T ss_dssp -CCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 66999999987643
No 27
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=35.97 E-value=14 Score=33.33 Aligned_cols=17 Identities=35% Similarity=0.907 Sum_probs=11.7
Q ss_pred hhCCC-CChhhHhhhhcc
Q 012099 375 VYGRD-PNWGRIAAAAGY 391 (471)
Q Consensus 375 i~G~D-pNWGRIlaAiG~ 391 (471)
+|... .|||||++-.--
T Consensus 83 lF~dGi~NWGRIVaLfaF 100 (157)
T 4hw4_A 83 VFSDGVTNWGRIVTLISF 100 (157)
T ss_dssp HGGGSCCCHHHHHHHHHH
T ss_pred HhccCCccHHHHHHHHHH
Confidence 44445 499999986643
No 28
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=33.53 E-value=12 Score=33.45 Aligned_cols=15 Identities=33% Similarity=0.793 Sum_probs=11.0
Q ss_pred CCChhhHhhhhccCC
Q 012099 379 DPNWGRIAAAAGYAG 393 (471)
Q Consensus 379 DpNWGRIlaAiG~SG 393 (471)
.+|||||++-.--++
T Consensus 88 i~nWGRIValf~F~~ 102 (157)
T 2nl9_A 88 VTNWGRIVTLISFGA 102 (157)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHH
Confidence 469999998765433
No 29
>2xa0_A BCL-2, apoptosis regulator BCL-2; cell death; 2.70A {Homo sapiens} PDB: 1gjh_A 1ysw_A* 2o21_A* 2o22_A* 1g5m_A
Probab=31.31 E-value=16 Score=34.52 Aligned_cols=64 Identities=17% Similarity=0.275 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCHHHHHHHHHHhhcchhhhhhhhCCCCChhhHhhhhccCC
Q 012099 318 QLQACLDAVMQGLAKSIAWDGEGATCLIEVRVTGANSEAEAAKIARSVASSSLVKAAVYGRDPNWGRIAAAAGYAG 393 (471)
Q Consensus 318 ~F~~aL~~v~~~LAk~Iv~DGEGATKli~v~V~GA~s~~~A~~iArsIa~S~LVKtAi~G~DpNWGRIlaAiG~SG 393 (471)
+-.++|..+..+|=++--+.=++..+-+.+ +.+.+...=..|+.. +|....|||||++...-.|
T Consensus 92 ~v~~~Lr~lgdEle~~~~~~F~~m~~qL~i------t~~~a~~~F~~Va~e------lF~DGiNWGRIVaLfaF~g 155 (207)
T 2xa0_A 92 VVHLTLRQAGDDFSRRYRRDFAEMSSQLHL------TPFTARGRFATVVEE------LFRDGVNWGRIVAFFEFGG 155 (207)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSCCGGGTCCC------CTTTHHHHHHHHHHH------HHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhCC------CcchHHHHHHHHHHH------HhcCCCCHHHHHHHHHHHH
Confidence 345556666666655433222222221111 222344444444443 4555699999998875443
No 30
>3pk1_A Induced myeloid leukemia cell differentiation Pro 1; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens}
Probab=31.12 E-value=16 Score=34.18 Aligned_cols=18 Identities=33% Similarity=0.866 Sum_probs=12.1
Q ss_pred hhCCC-CChhhHhhhhccC
Q 012099 375 VYGRD-PNWGRIAAAAGYA 392 (471)
Q Consensus 375 i~G~D-pNWGRIlaAiG~S 392 (471)
+|... +|||||++-..-.
T Consensus 116 lF~DGi~NWGRIVaLfaFg 134 (189)
T 3pk1_A 116 VFSDGVTNWGRIVTLISFG 134 (189)
T ss_dssp HTTTSCCCHHHHHHHHHHH
T ss_pred HhccCCccHHHHHHHHHHH
Confidence 34444 5999999876533
No 31
>3ilc_A BCL-2-like protein 1; apoptosis, BH3 domain, alternative splicing, cytoplasm, membrane, mitochondrion, transmembrane; 1.64A {Mus musculus} PDB: 3ihd_A 2bzw_A 1pq1_A 1pq0_A 3ihc_A 3iih_A 1af3_A 3ihf_A 3ilb_A 3iig_A 3ihe_A
Probab=28.43 E-value=21 Score=33.69 Aligned_cols=18 Identities=33% Similarity=0.761 Sum_probs=12.7
Q ss_pred hhCCCCChhhHhhhhccC
Q 012099 375 VYGRDPNWGRIAAAAGYA 392 (471)
Q Consensus 375 i~G~DpNWGRIlaAiG~S 392 (471)
||....|||||++...-.
T Consensus 131 lF~DGiNWGRIVaLfaFg 148 (197)
T 3ilc_A 131 LFRDGVNWGRIVAFFSFG 148 (197)
T ss_dssp GGTTCCCHHHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHH
Confidence 454458999998876543
No 32
>2a5y_A Apoptosis regulator CED-9; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: f.1.4.1
Probab=27.18 E-value=20 Score=33.87 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=11.1
Q ss_pred CCCChhhHhhhhcc
Q 012099 378 RDPNWGRIAAAAGY 391 (471)
Q Consensus 378 ~DpNWGRIlaAiG~ 391 (471)
...|||||++-.-=
T Consensus 117 dGiNWGRIVaLfaF 130 (204)
T 2a5y_A 117 SPMSYGRLIGLISF 130 (204)
T ss_dssp CTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 66999999987643
No 33
>4b4s_A BCL-2-like protein 10; apoptosis; HET: PG4; 1.90A {Homo sapiens}
Probab=26.70 E-value=18 Score=33.34 Aligned_cols=16 Identities=38% Similarity=1.010 Sum_probs=12.0
Q ss_pred CCCChhhHhhhhccCC
Q 012099 378 RDPNWGRIAAAAGYAG 393 (471)
Q Consensus 378 ~DpNWGRIlaAiG~SG 393 (471)
.+.|||||++..--.|
T Consensus 82 ~~inWGRIV~l~~F~g 97 (175)
T 4b4s_A 82 PGPTWGRVVTLVTFAG 97 (175)
T ss_dssp TCCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 3599999998765444
No 34
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.91 E-value=70 Score=23.46 Aligned_cols=31 Identities=13% Similarity=0.001 Sum_probs=26.5
Q ss_pred cCcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 144 ATGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 144 ~TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
-|-+|=-+-++++++.+++.||++++.|.|.
T Consensus 10 rt~eqK~~L~~~it~~~~~~lg~~~~~v~V~ 40 (62)
T 3m20_A 10 LDVGKKREFVERLTSVAAEIYGMDRSAITIL 40 (62)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCTTSCEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 3557777889999999999999999999874
No 35
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=25.84 E-value=61 Score=27.90 Aligned_cols=30 Identities=7% Similarity=-0.033 Sum_probs=27.4
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|.++=.+-+.++++.+.+.|||+++.|.|.
T Consensus 90 ~~e~n~~~s~~i~~~l~~~LgI~~~rvyI~ 119 (133)
T 3fwt_A 90 APSKPKMMTPRIAAAITKECGIPAERIYVF 119 (133)
T ss_dssp CTHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 678888999999999999999999999873
No 36
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=25.82 E-value=59 Score=26.52 Aligned_cols=30 Identities=0% Similarity=-0.051 Sum_probs=26.7
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|.+|=.+-.+++++.+.+.||+++++|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (112)
T 3b64_A 69 GPSEPEKVTSIVTAAITKECGIVADRIFVL 98 (112)
T ss_dssp CTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 457778899999999999999999999873
No 37
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=25.24 E-value=69 Score=23.06 Aligned_cols=30 Identities=20% Similarity=0.075 Sum_probs=25.7
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|-+|=-+-++++++.+++.||++++.|.|.
T Consensus 13 s~eqk~~l~~~lt~~l~~~lg~~~~~v~V~ 42 (64)
T 3abf_A 13 PPEKKRELVRRLTEMASRLLGEPYEEVRVI 42 (64)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCcccEEEE
Confidence 446667789999999999999999999874
No 38
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=24.48 E-value=63 Score=26.27 Aligned_cols=30 Identities=7% Similarity=0.075 Sum_probs=26.6
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|-+|=.+-.+++++.+.+.||+++++|.|.
T Consensus 68 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 97 (113)
T 1hfo_A 68 EPSRNRDHSAKLFDHLNTKLGIPKNRMYIH 97 (113)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcCeEEEE
Confidence 467778889999999999999999999873
No 39
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=24.31 E-value=69 Score=25.90 Aligned_cols=23 Identities=13% Similarity=0.088 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Q 012099 315 EAKQLQACLDAVMQGLAKSIAWD 337 (471)
Q Consensus 315 ~~~~F~~aL~~v~~~LAk~Iv~D 337 (471)
+|++|...+..++..+.+.+-.+
T Consensus 73 df~EF~~~m~~~~~~~~~~~~~~ 95 (100)
T 3nxa_A 73 SFDEYWTLIGGITGPIAKLIHEQ 95 (100)
T ss_dssp CHHHHHHHHHHHHGGGHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhcc
Confidence 68899999998888887776543
No 40
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=23.75 E-value=66 Score=26.29 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=26.6
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|-+|=.+-++++++.+.+.||+++++|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 1uiz_A 69 GGPQNKSYTKLLCDILTKQLNIPANRVYIN 98 (115)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 467778889999999999999999999873
No 41
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=23.35 E-value=70 Score=26.14 Aligned_cols=31 Identities=10% Similarity=0.100 Sum_probs=27.4
Q ss_pred cCcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 144 ATGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 144 ~TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
-|-+|=.+-.+++++.+.+.||+++++|.|.
T Consensus 68 ~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (115)
T 2xcz_A 68 LDGSRTQEVSELVCGHIEQNLGIPADRIYIG 98 (115)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 3667888899999999999999999999873
No 42
>1f16_A Protein (apoptosis regulator BAX, membrane isoform alpha); helical protein; NMR {Homo sapiens} SCOP: f.1.4.1 PDB: 2k7w_A
Probab=22.54 E-value=28 Score=32.31 Aligned_cols=17 Identities=35% Similarity=0.644 Sum_probs=12.8
Q ss_pred CCCCChhhHhhhhccCC
Q 012099 377 GRDPNWGRIAAAAGYAG 393 (471)
Q Consensus 377 G~DpNWGRIlaAiG~SG 393 (471)
..+.|||||++...-++
T Consensus 102 dG~inWGRIValf~F~g 118 (192)
T 1f16_A 102 DGNFNWGRVVALFYFAS 118 (192)
T ss_dssp SSSCCSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHH
Confidence 34599999998876544
No 43
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=21.63 E-value=76 Score=26.21 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=26.6
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|-+|=.+-.+++++.+.+.||+++++|.|.
T Consensus 69 ~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~ 98 (119)
T 2os5_A 69 SADDNIRHTQKITQFCQDTLKLPKDKVIIT 98 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 457778889999999999999999999873
No 44
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=21.27 E-value=79 Score=26.06 Aligned_cols=30 Identities=17% Similarity=0.149 Sum_probs=26.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
+.++=.+.+.++++.+.+.||++++.|.|.
T Consensus 68 ~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~ 97 (114)
T 3djh_A 68 GGAQNRSYSKLLCGLLAERLRISPDRVYIN 97 (114)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcceEEEE
Confidence 346778889999999999999999999873
No 45
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=20.79 E-value=81 Score=27.14 Aligned_cols=29 Identities=0% Similarity=-0.040 Sum_probs=25.9
Q ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 146 GDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 146 G~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
.++=.+-+.++++.+.+.||+++++|.|.
T Consensus 91 ~e~n~~~s~~i~~~l~~~LgI~~~riyI~ 119 (133)
T 3fwu_A 91 PSEPEKVTSIVTAAITKECGIVADRIFVL 119 (133)
T ss_dssp TTHHHHHHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCcChhhEEEE
Confidence 47778889999999999999999999873
No 46
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=20.26 E-value=85 Score=25.75 Aligned_cols=29 Identities=7% Similarity=0.063 Sum_probs=26.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEE
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLI 173 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv 173 (471)
+.++=.+-+.++++.+.+.||++++.|.|
T Consensus 69 ~~e~~~~l~~~i~~~l~~~Lgi~~~riyI 97 (114)
T 4dh4_A 69 TSSTNCKIAAALSAACERHLGVPKNRIYT 97 (114)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCCGGGEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEE
Confidence 45778889999999999999999999987
No 47
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=20.18 E-value=87 Score=22.27 Aligned_cols=30 Identities=17% Similarity=0.090 Sum_probs=25.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhCCCCCcEEEe
Q 012099 145 TGDAGYQDVVDCANTVAMLLKMRSEEVLIE 174 (471)
Q Consensus 145 TG~~G~~da~~~~~~~A~~l~~~~~~Vlv~ 174 (471)
|-++=-+-++++++.+.+.||+++++|.|.
T Consensus 12 s~e~k~~l~~~i~~~l~~~lg~p~~~v~v~ 41 (62)
T 1otf_A 12 TDEQKETLIRQVSEAMANSLDAPLERVRVL 41 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCCGGGCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHhCcCcccEEEE
Confidence 446667778999999999999999998873
Done!