BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012101
(471 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225445120|ref|XP_002280513.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77170
[Vitis vinifera]
gi|297738768|emb|CBI28013.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/473 (67%), Positives = 374/473 (79%), Gaps = 7/473 (1%)
Query: 6 PGISLSSLRMKSSHPLLHRLCK-----THTFRKHVTI--SAASSFLDTHEDPAKIVATQL 58
P + LS +++ + LC TH+ +A D +D A+ +A+ L
Sbjct: 7 PLLRLSIVQIPKPQTISRHLCNYLATTTHSVDAQFNFQPTAHPPSPDPIQDTAQTIASHL 66
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC NL++LNQ+ AHIIRTH L Y A F WNNIIR YTRLEA AL IYI MSRAGV
Sbjct: 67 SKCANLIELNQLLAHIIRTHFLELYPAPFQWNNIIRSYTRLEAHHYALSIYIAMSRAGVS 126
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+PIVLKA CQ FA GRQ+HS+A+R GLE NE+CESGFIS+YSKAG+F+ A KV
Sbjct: 127 PDSYTIPIVLKAVCQAFATGFGRQVHSVAIRHGLELNEYCESGFISVYSKAGEFQNAHKV 186
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++N RKLGSWNAII GLSQ GRAKEA+ MF+ ++KCGFEPD+VTMVSVTSACGSLG L
Sbjct: 187 FEQNRFRKLGSWNAIIGGLSQGGRAKEAVTMFMEMRKCGFEPDEVTMVSVTSACGSLGHL 246
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+LALQ+HK V+Q K+ ++SDTL LNSL+DMYGKCGRMDLAY+VF +D+PNVSSWTSMIV
Sbjct: 247 DLALQLHKCVYQAKTSERSDTLTLNSLVDMYGKCGRMDLAYRVFSRMDEPNVSSWTSMIV 306
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA +G +AL+CF MRE+G+RPNHVTF+GVLSACVHGG VQEGK++F+MM Y +
Sbjct: 307 GYAMHGQLYDALECFRCMREAGVRPNHVTFIGVLSACVHGGAVQEGKYYFDMMTTAYGLV 366
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGCMVDLLGRAGLLEEAR MVE MPMKANV++WGCLMGACEK+GNVKMGEWVA+H
Sbjct: 367 PRMQHYGCMVDLLGRAGLLEEARKMVERMPMKANVIVWGCLMGACEKYGNVKMGEWVAEH 426
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
L ELEPW+DG +VVLSNIYASRGLW EVER+R VMK R L K+PAYSLAT D
Sbjct: 427 LLELEPWNDGVFVVLSNIYASRGLWREVERVRGVMKERKLDKVPAYSLATNAD 479
>gi|449435190|ref|XP_004135378.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 609
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/423 (67%), Positives = 348/423 (82%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI 108
D A+IVAT L CTN+L+L QI+AH++RT+ML ++ ++F+WN IIR YTRLE P+ AL +
Sbjct: 187 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 246
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
YI M RAG+LPDCYTLPIV KA +A ++G QLHS+A+RLG E +++ ESG ISLYSK
Sbjct: 247 YIDMLRAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSK 306
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
GD E A KVF++N RKLGSWNAIIAGLSQ GRAKEA++MFI L++ G EPDD T+VSV
Sbjct: 307 IGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSV 366
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
TSACGSLG+LEL+LQ+HK+VFQVK KS+ LMLNSLIDMYGKCGRMDLA KVF +
Sbjct: 367 TSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHR 426
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
NVSSWTS+IVGYA +G +AL+ F +MRE+G+ PN VTFVGVLSACVHGG + EGKH+F
Sbjct: 427 NVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYF 486
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+MMKNVY +P+ HYGCMVDLL +AGLLEEAR M+E MPMKAN +IWGCL+G CEK GN
Sbjct: 487 DMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGN 546
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
V++GEW KHLQELEPW+DG YVVLSNIYA+ G+W+E +++R VMK R LAK+P YSLAT
Sbjct: 547 VEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSLAT 606
Query: 469 RLD 471
RLD
Sbjct: 607 RLD 609
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/428 (67%), Positives = 348/428 (81%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
+ + DP ++AT LS T + LNQIYAHI+ T L S A+F+WNNIIR YTRLE+P+
Sbjct: 20 ITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQ 79
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
AL IY+ M RAGVLPD YTLPIVLKA Q FA+++G+Q+HS ++LGL+SNE+CESGFI
Sbjct: 80 NALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFI 139
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+LY KAGDF+ A KVFDEN E KLGSWNA+I+GLSQ G A +AI +F+ +K+ GFEPD +
Sbjct: 140 NLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGI 199
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
TMVSV SACGS+GDL LALQ+HKYVFQ K+ + + LM NSLIDMYGKCGRMDLAY+VF
Sbjct: 200 TMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFA 259
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
++ NVSSWTSMIVGYA +G A EAL CFH MRESG++PN+VTF+GVLSACVHGG VQE
Sbjct: 260 TMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQE 319
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
G+ +F+MMKN+Y I P+ HYGCMVDLLGRAGL ++AR MVE MPMK N V+WGCLMGAC
Sbjct: 320 GRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGAC 379
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
EK GNV M EWVA++LQ LEPW++G YVVLSNIYA++GLW+EVERIR+ MK LAKIPA
Sbjct: 380 EKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPA 439
Query: 464 YSLATRLD 471
YS+ T D
Sbjct: 440 YSITTNSD 447
>gi|449506393|ref|XP_004162737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Cucumis sativus]
Length = 614
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 285/423 (67%), Positives = 348/423 (82%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI 108
D A+IVAT L CTN+L+L QI+AH++RT+ML ++ ++F+WN IIR YTRLE P+ AL +
Sbjct: 192 DHARIVATLLMNCTNVLELYQIHAHVLRTNMLENHPSSFYWNIIIRSYTRLEVPRIALFV 251
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
YI M +AG+LPDCYTLPIV KA +A ++G QLHS+A+RLG E +++ ESG ISLYSK
Sbjct: 252 YIAMLQAGILPDCYTLPIVFKALSLAYAFDLGLQLHSVAIRLGFEFDQYSESGLISLYSK 311
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
GD E A KVF++N RKLGSWNAIIAGLSQ GRAKEA++MFI L++ G EPDD T+VSV
Sbjct: 312 IGDLECACKVFEQNHNRKLGSWNAIIAGLSQGGRAKEAVNMFIKLRQSGLEPDDFTIVSV 371
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
TSACGSLG+LEL+LQ+HK+VFQVK KS+ LMLNSLIDMYGKCGRMDLA KVF +
Sbjct: 372 TSACGSLGNLELSLQMHKFVFQVKVTGKSNILMLNSLIDMYGKCGRMDLAMKVFSNMGHR 431
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
NVSSWTS+IVGYA +G +AL+ F +MRE+G+ PN VTFVGVLSACVHGG + EGKH+F
Sbjct: 432 NVSSWTSLIVGYAMHGQVKQALENFQFMREAGVPPNQVTFVGVLSACVHGGMINEGKHYF 491
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+MMKNVY +P+ HYGCMVDLL +AGLLEEAR M+E MPMKAN +IWGCL+G CEK GN
Sbjct: 492 DMMKNVYGFKPQLPHYGCMVDLLSKAGLLEEARRMIEEMPMKANSIIWGCLIGGCEKHGN 551
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
V++GEW KHLQELEPW+DG YVVLSNIYA+ G+W+E +++R VMK R LAK+P YSLAT
Sbjct: 552 VEIGEWAGKHLQELEPWNDGVYVVLSNIYATNGMWKEAQKMRDVMKQRQLAKVPGYSLAT 611
Query: 469 RLD 471
RLD
Sbjct: 612 RLD 614
>gi|388518129|gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/428 (67%), Positives = 347/428 (81%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
+ + DP ++AT LS T + LNQIYAHI+ T L S A+F+WNNIIR YTRLE+P+
Sbjct: 20 ITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQ 79
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
AL IY+ M RAGVLPD YTLPIVLKA Q FA+++G+Q+HS ++LGL+SNE+CESGFI
Sbjct: 80 NALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFI 139
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+LY KAGDF+ A KVFDEN E KLGSWNA+I+GLSQ G A +AI +F+ +K+ GFEPD +
Sbjct: 140 NLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGI 199
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
TMVSV ACGS+GDL LALQ+HKYVFQ K+ + + LM NSLIDMYGKCGRMDLAY+VF
Sbjct: 200 TMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFA 259
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
++ NVSSWTSMIVGYA +G A EAL CFH MRESG++PN+VTF+GVLSACVHGG VQE
Sbjct: 260 TMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQE 319
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
G+ +F+MMKN+Y I P+ HYGCMVDLLGRAGL ++AR MVE MPMK N V+WGCLMGAC
Sbjct: 320 GRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGAC 379
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
EK GNV M EWVA++LQ LEPW++G YVVLSNIYA++GLW+EVERIR+ MK LAKIPA
Sbjct: 380 EKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKIPA 439
Query: 464 YSLATRLD 471
YS+ T D
Sbjct: 440 YSITTNSD 447
>gi|15223858|ref|NP_177842.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215262|sp|Q3ECB8.1|PP128_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g77170
gi|332197823|gb|AEE35944.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 467
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 267/440 (60%), Positives = 344/440 (78%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH 88
H VT S++S + +D K++AT LS CT+L ++ +I+ I R+ +L Y AF
Sbjct: 25 HRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFL 84
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WNNI+R Y R E+P A+ +Y+ M R+ VLPD Y+LPIV+KA+ Q+ +G++LHS+AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLG +EFCESGFI+LY KAG+FE ARKVFDENPERKLGSWNAII GL+ GRA EA++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF+ +K+ G EPDD TMVSVT++CG LGDL LA Q+HK V Q K+++KSD +MLNSLIDM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCGRMDLA +F E+ Q NV SW+SMIVGYAANG EAL+CF MRE G+RPN +TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSACVHGG V+EGK +F MMK+ +++EP +HYGC+VDLL R G L+EA+ +VE MP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK NV++WGCLMG CEKFG+V+M EWVA ++ ELEPW+DG YVVL+N+YA RG+W++VER
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 449 IRAVMKHRNLAKIPAYSLAT 468
+R +MK + +AKIPAYS A+
Sbjct: 445 VRKLMKTKKVAKIPAYSYAS 464
>gi|297842491|ref|XP_002889127.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334968|gb|EFH65386.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 466
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 260/421 (61%), Positives = 333/421 (79%)
Query: 48 EDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALD 107
+D K++AT LS CT+L ++ +I+ I R+ +L Y AF WNNI+R Y R ++P ++
Sbjct: 43 QDRNKLLATLLSNCTSLARVRRIHGDIFRSCILDQYPIAFLWNNIMRSYIRHDSPLDSVQ 102
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+Y+ M R+ VLPD YTLPIV+KA+ Q+ +G+QLHS+AVRLG +EFCESGFI+LY
Sbjct: 103 VYLGMVRSNVLPDRYTLPIVIKAAVQIHDFPLGKQLHSVAVRLGFVGDEFCESGFITLYC 162
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
KAG+ E AR VFDENPERKLGSWNAII GL+ GRA EA++MF+ +++ GFEPDD TMVS
Sbjct: 163 KAGELENARNVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFMEMRRSGFEPDDFTMVS 222
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
VTSACG LGDL LA Q+HK V Q K+++KSD +M+NSLIDMYGKCGRMD A +VF E+ Q
Sbjct: 223 VTSACGGLGDLNLAFQLHKCVLQAKTEEKSDVMMMNSLIDMYGKCGRMDFAIQVFEEMPQ 282
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
NV SW+SMI GYAANG EAL+CF MRE G+RPN +TFVGVLSACVHGG V+EGK +
Sbjct: 283 RNVVSWSSMITGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKAY 342
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
F MMK+ + +EP +HYGC+VDLL R G L+EA+ +VE MPMK NV++WGCLMG CEKFG
Sbjct: 343 FAMMKSEFNLEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 402
Query: 408 NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLA 467
+V+M EWVA ++ ELEPW+DG YVVL+N+YA +G+W++VER+R VMK + +AKIPAYS A
Sbjct: 403 DVEMAEWVAPYMVELEPWNDGVYVVLANVYALKGMWKDVERVRKVMKEKKVAKIPAYSYA 462
Query: 468 T 468
+
Sbjct: 463 S 463
>gi|255546351|ref|XP_002514235.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546691|gb|EEF48189.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 352
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/293 (70%), Positives = 245/293 (83%)
Query: 48 EDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALD 107
+D AK ATQ S CT L LNQIYAHII + +LH YSA FHWNNIIR YTRL+AP KAL
Sbjct: 50 QDIAKWAATQSSNCTTLRDLNQIYAHIICSDLLHFYSAPFHWNNIIRSYTRLDAPVKALQ 109
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+YI MSRAGVLPD YTLPIVLKA+CQ+F++EIG+QL S+A+RLGLESNE+CESGFIS YS
Sbjct: 110 VYISMSRAGVLPDSYTLPIVLKAACQIFSIEIGKQLQSVAIRLGLESNEYCESGFISFYS 169
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
K+GD + A K+F+ENPERKLGSWNAII GLSQ G AKEAI++FI ++KCGF PDDVTMVS
Sbjct: 170 KSGDIKNAYKMFEENPERKLGSWNAIIGGLSQGGHAKEAIEIFIEMRKCGFVPDDVTMVS 229
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V SACGSLGDL LA+Q+HKYVF +++ L++NSLIDMYGKCGRMDLA +VF + +
Sbjct: 230 VISACGSLGDLNLAIQLHKYVFHANVFGRTNILVMNSLIDMYGKCGRMDLARRVFCTMGE 289
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
NVSSWTSMIVGY +G NEA++ FH MRE+G+RPNHVTF+GVLS CVHGGK
Sbjct: 290 KNVSSWTSMIVGYGMHGHVNEAIEYFHCMREAGVRPNHVTFIGVLSVCVHGGK 342
>gi|224114537|ref|XP_002332354.1| predicted protein [Populus trichocarpa]
gi|222832075|gb|EEE70552.1| predicted protein [Populus trichocarpa]
Length = 254
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/254 (74%), Positives = 216/254 (85%)
Query: 46 THEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKA 105
+++DP+K +ATQLS CT+L +LNQ YAH+IRTH+L Y+A FHWNN+IR YTRL AP KA
Sbjct: 1 SNQDPSKTIATQLSNCTSLQELNQTYAHVIRTHVLDVYTAPFHWNNLIRCYTRLGAPNKA 60
Query: 106 LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
L IY+ MS AG+ PD YTLPIVLKA+CQ F++E+GRQLHS+A+RLGLE NE+CESGFISL
Sbjct: 61 LQIYVSMSHAGISPDNYTLPIVLKAACQCFSMELGRQLHSIAIRLGLELNEYCESGFISL 120
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
YSK+GDF A KVF+EN ERKLGSWNAII GL Q GRAKE I+MFI ++ CGF+PDDVTM
Sbjct: 121 YSKSGDFGDAYKVFEENLERKLGSWNAIIGGLCQGGRAKEVIEMFIEMRSCGFKPDDVTM 180
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
VSVTSACG LGDL LALQ+HKYVFQ KS K D LMLNSLIDMYGKCGRMDLAY VF +
Sbjct: 181 VSVTSACGILGDLHLALQLHKYVFQAKSFVKPDMLMLNSLIDMYGKCGRMDLAYMVFSRM 240
Query: 286 DQPNVSSWTSMIVG 299
DQ NVSSWTSMIVG
Sbjct: 241 DQRNVSSWTSMIVG 254
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 10/211 (4%)
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WN +I ++ G +A+ +++ + G PD+ T+ V A +EL Q+H
Sbjct: 44 WNNLIRCYTRLGAPNKALQIYVSMSHAGISPDNYTLPIVLKAACQCFSMELGRQLHS--I 101
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
++ + + + I +Y K G AYKVF E + + SW ++I G G A E
Sbjct: 102 AIRLGLELNEYCESGFISLYSKSGDFGDAYKVFEENLERKLGSWNAIIGGLCQGGRAKEV 161
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ----IEPRFAHYG 365
++ F MR G +P+ VT V V SAC G + + ++ K V+Q ++P
Sbjct: 162 IEMFIEMRSCGFKPDDVTMVSVTSAC---GILGDLHLALQLHKYVFQAKSFVKPDMLMLN 218
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++D+ G+ G ++ A + M + NV W
Sbjct: 219 SLIDMYGKCGRMDLAYMVFSRMDQR-NVSSW 248
>gi|357130868|ref|XP_003567066.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g77170-like [Brachypodium distachyon]
Length = 433
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/384 (50%), Positives = 255/384 (66%), Gaps = 4/384 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFAL--EIGRQLH 144
FHWN + R Y R + + AL + M R PD YT P+ LKA+ Q + RQ H
Sbjct: 50 FHWNALTRAYLRHGSSRSALCVAAHMFRCAAHPDRYTFPLALKAAAQGEPPISSLRRQFH 109
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ A + GL + F ES IS YSKAGD + AR+VFDENP R LGSWNAII+GLSQ G +K
Sbjct: 110 AAAAKRGLARHPFTESALISCYSKAGDLDAARRVFDENPHRGLGSWNAIISGLSQAGESK 169
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
E + +F+ +++CG PDD+TMVS+ S+C ++GD+ L Q+HK + Q K + D + N+
Sbjct: 170 EPLALFVKMRRCGVVPDDLTMVSLVSSCCAVGDIGLVEQLHKCMLQCKHSSRLDVTLSNA 229
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCGR DLA +VF + +VSSWT+MI G A +G AL F M+ G+ PN
Sbjct: 230 LIDMYAKCGRTDLAGRVFERMPLRDVSSWTTMITGLATHGEEQRALKKFDEMKSEGVPPN 289
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKN-VYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
VT + VLSAC H G V G + M++ ++ P HYGC+VDLLGR G +++ARA+
Sbjct: 290 RVTMLAVLSACAHRGLVDTGMGLLKQMEDGEIKVAPTVEHYGCLVDLLGRVGWVDDARAL 349
Query: 384 VE-GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
VE MPM+ANVVIWG L+GACEK GNV +GEW A+ LQE EPW+DG YVVLSN+YA+ G+
Sbjct: 350 VEHRMPMEANVVIWGTLLGACEKHGNVSVGEWAAERLQEAEPWNDGVYVVLSNVYAAAGM 409
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W EVER+R +M R + K P SL
Sbjct: 410 WGEVERVRKMMSGRKVTKFPGCSL 433
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/422 (40%), Positives = 252/422 (59%), Gaps = 10/422 (2%)
Query: 46 THEDPAK-IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK 104
T+ D K ++ T LS C+ + +QI++ I ++ F WN +IR Y E P
Sbjct: 71 TNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNI-------FTWNTMIRGYAESENPMP 123
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
AL++Y M + + PD +T P +LKA +L + G ++HS+A+R G ES F ++ +
Sbjct: 124 ALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVH 183
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y+ G E A K+F+ ER L +WN++I G + +GR EA+ +F + G EPD T
Sbjct: 184 MYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 243
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
MVS+ SAC LG L L + H V+ VK + N+L+D+Y KCG + A+KVF E
Sbjct: 244 MVSLLSACAELGALALGRRAH--VYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDE 301
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+++ +V SWTS+IVG A NG EAL+ F + G+ P+ +TFVGVL AC H G V EG
Sbjct: 302 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 361
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+F+ MK Y I P+ HYGCMVDLLGRAGL+++A ++ MPM+ N V+W L+GAC
Sbjct: 362 FDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACT 421
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
G++ +GE L +LEP G YV+LSN+YAS W +V ++R M + K P +
Sbjct: 422 IHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGH 481
Query: 465 SL 466
SL
Sbjct: 482 SL 483
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/489 (35%), Positives = 269/489 (55%), Gaps = 37/489 (7%)
Query: 10 LSSLRMKSSHPLLHRLCK--THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQL 67
+ SL + PL HR H F + + L P + + LS+ ++
Sbjct: 2 ICSLSLLHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSP--LSSLPLSRVASVCAF 59
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N +++ L S HWN +R + ++P A+ ++ + + PD YT V
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD------- 180
LKA +L + G+ +H +LGL+SN F ++ + LY+ G+ ARKVFD
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 181 ------------------------ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
E PER + SW ++I G +Q G++KEAID+F+ ++
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G P++VT+V+V AC +G+L L ++H F +S + + + N+LIDMY KCG ++
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHD--FSNRSGYEKNIRVCNTLIDMYVKCGCLE 297
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A ++F +++ V SW++MI G AA+G A +AL F+ M +G++PN VTF+G+L AC
Sbjct: 298 DACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACS 357
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G V++G+ +F M Y I PR HYGCMVDL RAGLL+EA + MP+ N V+W
Sbjct: 358 HMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVW 417
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+G C+ N+K+ E +HL +L+P +DG YVVLSNIYA G WE+V R+R +M+ R
Sbjct: 418 GALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
Query: 457 NLAKIPAYS 465
+ K P +S
Sbjct: 478 GVKKTPGWS 486
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/378 (41%), Positives = 243/378 (64%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I+ Y ++ ++ + ++ M + D TL IVL + +L L +GR+LH +
Sbjct: 194 WTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYII 253
Query: 149 R-LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R + + F + + +Y K GD ARKVF E P + + SWN++I+GL+Q G+ KE++
Sbjct: 254 RNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESL 313
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
MF +++ G +PDDVT+V+V ++C +LG LEL VH Y+ +++ ++D + N+L+D
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLD--RNQIRADGFIGNALVD 371
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +D A VF +++ +V S+T+MIVG A +G +ALD F M + GI P+ VT
Sbjct: 372 MYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVT 431
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVL+AC H G V+EG+ +FE M +Y + P+ HYGCMVDLLGRAGL+ EA + M
Sbjct: 432 FVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNM 491
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ + + G L+GAC+ G V++GE V K ++++EP DGAYV++SNIY+S W +
Sbjct: 492 PIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDAL 551
Query: 448 RIRAVMKHRNLAKIPAYS 465
++R MK RNL K P S
Sbjct: 552 KLRKTMKERNLEKTPGCS 569
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 184/348 (52%), Gaps = 14/348 (4%)
Query: 49 DPAKIVATQLSK-CTNLLQLNQIYA----HIIRTHMLHSYSAAFHWNNIIR-LYTRLEAP 102
D ++T+LS C L ++ YA +RT L Y+A IIR L T
Sbjct: 53 DAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNA------IIRGLATSNNDS 106
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
+ L +Y M G++PD YT+P VLKA + A+ G ++H A+++GL S+ + +
Sbjct: 107 IEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTL 166
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+ ARKVFD +P+R L SW +I G + G A+E + +F + + D
Sbjct: 167 MRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADG 226
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T+V V S+C LGDL L ++H+Y+ + S D + N+L+DMY KCG + A KVF
Sbjct: 227 MTLVIVLSSCARLGDLRLGRKLHRYIIR-NSNVNLDVFVGNALVDMYLKCGDANFARKVF 285
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
E+ NV SW SMI G A G E+L F M+ G++P+ VT V VL++C + G ++
Sbjct: 286 QEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLE 345
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
GK + + QI +VD+ + G +++A + + M K
Sbjct: 346 LGKWVHAYL-DRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRK 392
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/480 (36%), Positives = 264/480 (55%), Gaps = 37/480 (7%)
Query: 10 LSSLRMKSSHPLLHRLCK--THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQL 67
+ SL + PL HR H F + + L P + + LS+ ++
Sbjct: 2 ICSLSLLHVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSP--LSSLPLSRVASVCAF 59
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N +++ L S HWN +R + ++P A+ ++ + + PD YT V
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD------- 180
LKA +L + G+ +H +LGL+SN F ++ + LY+ G+ ARKVFD
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 181 ------------------------ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
E PER + SW ++I G +Q G++KEAID+F+ ++
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G P++VT+V+V AC +G+L L ++H F +S + + + N+LIDMY KCG ++
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHD--FSNRSGYEKNIRVCNTLIDMYVKCGCLE 297
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A ++F +++ V SW++MI G AA+G A +AL F+ M +G++PN VTF+G+L AC
Sbjct: 298 DACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACS 357
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G V++G+ +F M Y I PR HYGCMVDL RAGLL+EA + MP+ N V+W
Sbjct: 358 HMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVW 417
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+G C+ NVK+ E +HL +L+P +DG YVVLSNIYA G WE+V R+R +M+ R
Sbjct: 418 GALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDR 477
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 172/468 (36%), Positives = 253/468 (54%), Gaps = 61/468 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA----------------------------FHW 89
L CT L L I+AH+IR H + AA F +
Sbjct: 22 LESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIY 81
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N+ IR ++ + P K+ Y+ R G++PD T P ++KA Q +L++G Q H +R
Sbjct: 82 NSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHGQIIR 141
Query: 150 LGLESNEFCESGFISLYS-------------------------------KAGDFEKARKV 178
G +S+ + ++ +++YS K+GD ARK+
Sbjct: 142 HGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKL 201
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD+ PE+ L +W+ +I+G +++ +AI+++ L+ G ++ MVSV ++C LG L
Sbjct: 202 FDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGAL 261
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
EL + H Y+ +++K + ++ +L+DMY +CG +D A VF ++ + SWT++I
Sbjct: 262 ELGERAHDYI--LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIA 319
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G+A +G A +AL+ F M ++G+ P +TF VLSAC HGG V+ G FE MK Y+IE
Sbjct: 320 GFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESMKRDYRIE 379
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGCMVDLLGRAG L EA V MPMK N IWG L+GAC N ++ E K
Sbjct: 380 PRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKT 439
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL+P G YV+LSNIYA WE VE IR +MK R + K P Y+L
Sbjct: 440 LIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYTL 487
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 250/437 (57%), Gaps = 32/437 (7%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------FHW 89
KCT++ QL QI+A +I + +H AA F W
Sbjct: 37 KCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMW 96
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +IR + P +AL +Y+ M R V+P +T P +LKA +L+ Q+H+ ++
Sbjct: 97 NTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLK 156
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
GL+ N +G + YS + D AR+VFDE ER L W +I+G +Q+ + EA+++
Sbjct: 157 FGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALEL 216
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G EP+ T+ SV SAC G L+L ++H VF + + ++ +L+ MY
Sbjct: 217 FDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIH--VFMEEKGIEVGVILGTALVHMY 274
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
K G + +A K+F I + N ++W +MI G A +G A EALD F + + I PN +TFV
Sbjct: 275 AKNGAILMAQKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFV 334
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVLSAC H G + G+ F +MK VY IEP+ HYGCMVDLLGR G L EA +++GM
Sbjct: 335 GVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAW 394
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
KA+VVI G L+G+C+ GN+++ E V K + LEP + G YVVLSN+YA G WE+V R+
Sbjct: 395 KADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRL 454
Query: 450 RAVMKHRNLAKIPAYSL 466
R VMK NL K P +SL
Sbjct: 455 RKVMKSGNLKKTPGWSL 471
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/437 (39%), Positives = 250/437 (57%), Gaps = 32/437 (7%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------FHW 89
KCT++ QL QI+A +I + +H AA F W
Sbjct: 35 KCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLFNNTQEPNSFMW 94
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +IR + P +AL +Y+ M R V+P +T P +LKA +L+ Q+H+ ++
Sbjct: 95 NTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQSLQSCIQVHTHVLK 154
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
GL+ N +G + YS + D AR+VFDE ER L W +I+G +Q+ + EA+++
Sbjct: 155 FGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALEL 214
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G EP+ T+ SV SAC G L+L ++H VF + + ++ +L+ MY
Sbjct: 215 FDQMIVEGLEPNGATLASVLSACAQSGCLDLGERIH--VFMEEKGIEVGVILGTALVHMY 272
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
K G + +A K+F I + N ++W +MI G A +G A EALD F + + I PN +TFV
Sbjct: 273 AKNGAILMAQKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFV 332
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVLSAC H G + G+ F +MK VY IEP+ HYGCMVDLLGR G L EA +++GM
Sbjct: 333 GVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAW 392
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
KA+VVI G L+G+C+ GN+++ E V K + LEP + G YVVLSN+YA G WE+V R+
Sbjct: 393 KADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRL 452
Query: 450 RAVMKHRNLAKIPAYSL 466
R VMK NL K P +SL
Sbjct: 453 RKVMKSGNLKKTPGWSL 469
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 233/380 (61%), Gaps = 1/380 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I Y + ++AL + M RA V P+ T+ VL A Q +LE+G + S
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
GL SN + I +YSK GD +KAR +F+ E+ + SWN +I G S KE
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F +++ EP+DVT VS+ AC LG L+L +H Y+ + K ++T + SL
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK-KFLGLTNTSLWTSL 407
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG ++ A +VF + ++ SW +MI G A +G AN AL+ F MR+ G P+
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFVGVLSAC H G V+ G+ F M Y I P+ HYGCM+DLLGRAGL +EA A+++
Sbjct: 468 ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M MK + IWG L+GAC GNV++GE+ AKHL ELEP + GAYV+LSNIYA+ G W++
Sbjct: 528 NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V RIR + + + K+P S
Sbjct: 588 VARIRTKLNDKGMKKVPGCS 607
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 222/470 (47%), Gaps = 72/470 (15%)
Query: 43 FLDTHEDPAKIVA-----TQLSKCTNLLQLNQIYAHIIRTHMLHSYSA------------ 85
F T + P K++ T LS C + L QI++ II+T + ++ A
Sbjct: 19 FQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISP 78
Query: 86 ------------------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
F WN +IR + +P A+D Y+ M GV P+ YT P +
Sbjct: 79 FGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFL 138
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD---------------- 171
LK+ ++ A + G+Q+H ++LGLES+ F + I++Y++ G+
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198
Query: 172 ---------------FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ AR++F+E P R SWNA+IAG +Q GR +EA+ F +K+
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P++ TMV+V SAC G LEL V ++ S+ ++N+LIDMY KCG +D
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWI--EDHGLGSNLRLVNALIDMYSKCGDLD 316
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +F I + ++ SW MI GY+ EAL F M++S + PN VTFV +L AC
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ G + GK + + + + ++D+ + G +E A+ + GM K+ + W
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSW 435
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGLWE 444
++ G+ M + + +++ EP D +V + + + GL E
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEP-DDITFVGVLSACSHAGLVE 484
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 172/404 (42%), Gaps = 76/404 (18%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENP 183
+ L ++C+ F + +Q+HS ++ GL + +F S I S G+ A +F+
Sbjct: 36 LTLLSTCKSF--QNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ WN +I G S AID ++ + CG EP+ T + +C +G + Q
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR----------------------------- 274
+H +V +K +SD + SLI+MY + G
Sbjct: 154 IHGHV--LKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 275 --MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
+D A ++F EI + SW +MI GYA +G EAL F M+ + + PN T V VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC G ++ G +++ + + ++D+ + G L++AR + EG+ K +
Sbjct: 272 SACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK-D 329
Query: 393 VVIWGCLMG-----------------------------------ACEKFGNVKMGEWVAK 417
++ W ++G AC G + +G+W+
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 418 HLQE--LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
++ + L + + L ++YA G E +++ A MK ++L
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 186/471 (39%), Positives = 254/471 (53%), Gaps = 50/471 (10%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQ--------LNQIYAHIIR--------- 76
HVT + S+ T E+P L+KC +LLQ L QI+A IR
Sbjct: 3 HVTTNFVST---TPENP-------LTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPD 52
Query: 77 -------------THMLHSYSA--------AFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
M ++Y+ F WN IIR Y + P A Y M +
Sbjct: 53 MGKHLIFTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVS 112
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
V PD +T P +LKA + + G +HS+ +R G ES F ++ + +Y+ GD E A
Sbjct: 113 CVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESA 172
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
KVF+ ER L +WN++I G + +GR EA+ +F + G EPD T+VS+ SA L
Sbjct: 173 YKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAEL 232
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LEL +VH Y+ +V + S + NSL+D+Y KCG + A +VF E+ + N SWTS
Sbjct: 233 GALELGRRVHVYLLKVGLSKNSH--VTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTS 290
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+IVG A NG EAL+ F M G+ P+ +TFVGVL AC H G + EG +F MK
Sbjct: 291 LIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEEC 350
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
I PR HYGCMVDLL RAGL+++A ++ MP++ N VIW L+GAC G++ +GE
Sbjct: 351 GIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIA 410
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL LEP G YV+LSN+YAS W +V+ IR M + K P YSL
Sbjct: 411 RSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSL 461
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/504 (35%), Positives = 270/504 (53%), Gaps = 82/504 (16%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA--- 86
TF+ +T+S I+ T L C NL Q N+I + +I T + AA
Sbjct: 22 TFKPTITLS--------------ILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRL 67
Query: 87 ---------------------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
F WN ++R Y + + +KAL +Y M + V P
Sbjct: 68 LKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGP 127
Query: 120 DCYTLPIVLKASCQLFALEIG-RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D YT P+V++A C + LE G +++H +++G +S+ + ++ I++Y+ G+ ARK+
Sbjct: 128 DNYTYPLVVQA-CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 186
Query: 179 FDENP----------------------------------ERKLGSWNAIIAGLSQDGRAK 204
FDE+P E+ + SW+A+I+G Q+G +
Sbjct: 187 FDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYE 246
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ--VKSKQKSDTLML 262
EA+ MFI + G D+V +VSV SAC L ++ +H V + ++S ++
Sbjct: 247 EALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALI 306
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+ DMY KCG ++ A +VF +++ VSSW ++I+G A NGL +LD F M+ +G+
Sbjct: 307 HMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVI 366
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN +TF+GVL AC H G V EG+ F M + IEP HYGCMVDLLGRAGLL EA
Sbjct: 367 PNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEK 426
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++E MPM +V WG L+GAC+K G+ +MGE V + L EL+P DG +V+LSNI+AS+G
Sbjct: 427 LIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGD 486
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
WE+V +R +MK + + K P SL
Sbjct: 487 WEDVLEVRGMMKQQGVVKTPGCSL 510
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 230/375 (61%), Gaps = 1/375 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I Y + ++AL + M RA V P+ T+ VL A Q +LE+G + S
Sbjct: 229 AVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRS 288
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
GL SN + I +YSK GD +KAR +F+ E+ + SWN +I G S KE
Sbjct: 289 WIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKE 348
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F +++ EP+DVT VS+ AC LG L+L +H Y+ + K ++T + SL
Sbjct: 349 ALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDK-KFLGLTNTSLWTSL 407
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG ++ A +VF + ++ SW +MI G A +G AN AL+ F MR+ G P+
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDD 467
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFVGVLSAC H G V+ G+ F M Y I P+ HYGCM+DLLGRAGL +EA A+++
Sbjct: 468 ITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMK 527
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M MK + IWG L+GAC GNV++GE+ AKHL ELEP + GAYV+LSNIYA+ G W++
Sbjct: 528 NMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDD 587
Query: 446 VERIRAVMKHRNLAK 460
V RIR + + + K
Sbjct: 588 VARIRTKLNDKGMKK 602
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 129/450 (28%), Positives = 213/450 (47%), Gaps = 71/450 (15%)
Query: 43 FLDTHEDPAKIVA-----TQLSKCTNLLQLNQIYAHIIRTHMLHSYSA------------ 85
F T + P K++ T LS C + L QI++ II+T + ++ A
Sbjct: 19 FQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISP 78
Query: 86 ------------------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
F WN +IR + +P A+D Y+ M GV P+ YT P +
Sbjct: 79 FGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFL 138
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD---------------- 171
LK+ ++ A + G+Q+H ++LGLES+ F + I++Y++ G+
Sbjct: 139 LKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDA 198
Query: 172 ---------------FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ AR++F+E P R SWNA+IAG +Q GR +EA+ F +K+
Sbjct: 199 VSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRA 258
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P++ TMV+V SAC G LEL V ++ S+ ++N+LIDMY KCG +D
Sbjct: 259 NVAPNESTMVTVLSACAQSGSLELGNWVRSWI--EDHGLGSNLRLVNALIDMYSKCGDLD 316
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +F I + ++ SW MI GY+ EAL F M++S + PN VTFV +L AC
Sbjct: 317 KARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACA 376
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ G + GK + + + + ++D+ + G +E A+ + GM K+ + W
Sbjct: 377 YLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS-LGSW 435
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQE--LEP 424
++ G+ M + + +++ EP
Sbjct: 436 NAMISGLAMHGHANMALELFRQMRDEGFEP 465
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 172/404 (42%), Gaps = 76/404 (18%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENP 183
+ L ++C+ F + +Q+HS ++ GL + +F S I S G+ A +F+
Sbjct: 36 LTLLSTCKSF--QNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIE 93
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ WN +I G S AID ++ + CG EP+ T + +C +G + Q
Sbjct: 94 QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQ 153
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR----------------------------- 274
+H +V +K +SD + SLI+MY + G
Sbjct: 154 IHGHV--LKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLR 211
Query: 275 --MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
+D A ++F EI + SW +MI GYA +G EAL F M+ + + PN T V VL
Sbjct: 212 GCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVL 271
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC G ++ G +++ + + ++D+ + G L++AR + EG+ K +
Sbjct: 272 SACAQSGSLELGNWVRSWIED-HGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK-D 329
Query: 393 VVIWGCLMG-----------------------------------ACEKFGNVKMGEWVAK 417
++ W ++G AC G + +G+W+
Sbjct: 330 IISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHA 389
Query: 418 HLQE--LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
++ + L + + L ++YA G E +++ A MK ++L
Sbjct: 390 YIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLG 433
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 257/465 (55%), Gaps = 63/465 (13%)
Query: 65 LQLNQIYAHIIRTH------------MLHSYSAAFH------------------WNNIIR 94
+L Q++A II+T+ ++ +++ +FH WN+ ++
Sbjct: 42 FELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLK 101
Query: 95 LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
++P A+ ++ + + V PD +T VL+A L L GR LH + ++G S
Sbjct: 102 ALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS 161
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDE-------------------------------NP 183
N + ++ + LY+ G+ +AR +F++ P
Sbjct: 162 NLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP 221
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
ER + SW ++IAG Q G+AKEAI +F +++ G + ++VT+V+V +AC LG L+L ++
Sbjct: 222 ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 281
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H+Y + K + + N+LIDMY KCG ++ A KVF E+++ V SW++MI G A +
Sbjct: 282 IHEY--SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G A EAL F M + GI PN VTF+G+L AC H G + EG+ FF M Y I P+ H
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YGCMVDLL RAGLL EA + MPMK N V+WG L+GAC NV+M E KHL EL+
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELD 459
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
P +DG YVVLSNIYA G WE+ R+R MK R + K P +S T
Sbjct: 460 PLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSIT 504
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 257/465 (55%), Gaps = 63/465 (13%)
Query: 65 LQLNQIYAHIIRTH------------MLHSYSAAFH------------------WNNIIR 94
+L Q++A II+T+ ++ +++ +FH WN+ ++
Sbjct: 42 FELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLK 101
Query: 95 LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
++P A+ ++ + + V PD +T VL+A L L GR LH + ++G S
Sbjct: 102 ALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS 161
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDE-------------------------------NP 183
N + ++ + LY+ G+ +AR +F++ P
Sbjct: 162 NLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMP 221
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
ER + SW ++IAG Q G+AKEAI +F +++ G + ++VT+V+V +AC LG L+L ++
Sbjct: 222 ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMR 281
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H+Y + K + + N+LIDMY KCG ++ A KVF E+++ V SW++MI G A +
Sbjct: 282 IHEY--SNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMH 339
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G A EAL F M + GI PN VTF+G+L AC H G + EG+ FF M Y I P+ H
Sbjct: 340 GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEH 399
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YGCMVDLL RAGLL EA + MPMK N V+WG L+GAC NV+M E KHL EL+
Sbjct: 400 YGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELD 459
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
P +DG YVVLSNIYA G WE+ R+R MK R + K P +S T
Sbjct: 460 PLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSIT 504
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 233/378 (61%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y+ +AL + M G+ P+ T+ VL A LFALE G+Q+H A+
Sbjct: 290 WNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAI 349
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G ESN+ + +++Y+K G+ A K+F+ P++ + +WNAII+G SQ G EA+
Sbjct: 350 RSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALA 409
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+FI ++ G +PD +VSV AC LE Q+H Y ++S +S+ ++ L+D+
Sbjct: 410 LFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYT--IRSGFESNVVVGTGLVDI 467
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A K+F + + +V SWT+MI+ Y +G +AL F M+E+G + +H+ F
Sbjct: 468 YAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAF 527
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L+AC H G V +G +F+ MK+ Y + P+ HY C+VDLLGRAG L+EA +++ M
Sbjct: 528 TAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMS 587
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + +WG L+GAC N+++GE AKHL EL+P + G YV+LSNIYA WE+V +
Sbjct: 588 LEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAK 647
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R +MK + + K P S+
Sbjct: 648 LRKMMKEKGVKKQPGCSV 665
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/356 (34%), Positives = 187/356 (52%), Gaps = 22/356 (6%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
++S C N Q Q IR + A W I Y + KAL +Y M R G
Sbjct: 66 EVSACANQTQFTQT---DIRNN-------AVVWKETIIGYVKNGFWNKALRLYYQMQRTG 115
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+ PD V+KA L+ GR++H + G ES+ + S+Y+K G E AR
Sbjct: 116 INPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENAR 175
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+VFD P+R + SWNAIIAG SQ+G+ EA+ +F ++ G +P+ T+VSV C L
Sbjct: 176 QVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLL 235
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE Q+H Y ++S +SD L++N L++MY KCG ++ A+K+F + +V+SW ++
Sbjct: 236 ALEQGKQIHCYA--IRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAI 293
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY+ N +EAL F+ M+ GI+PN +T V VL AC H +++G+ + Y
Sbjct: 294 IGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQI-----HGYA 348
Query: 357 IEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
I F +V++ + G + A + E MP K NVV W ++ + G+
Sbjct: 349 IRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMP-KKNVVAWNAIISGYSQHGH 403
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/351 (32%), Positives = 193/351 (54%), Gaps = 19/351 (5%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
+A+ +KC +L Q++ + + ++ WN II Y++ P +AL ++ M
Sbjct: 161 LASMYTKCGSLENARQVFDRMPKRDVVS-------WNAIIAGYSQNGQPYEALALFSEMQ 213
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ P+ TL V+ L ALE G+Q+H A+R G+ES+ +G +++Y+K G+
Sbjct: 214 VNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVN 273
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A K+F+ P R + SWNAII G S + + EA+ F ++ G +P+ +TMVSV AC
Sbjct: 274 TAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACA 333
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L LE Q+H Y ++S +S+ ++ N+L++MY KCG ++ AYK+F + + NV +W
Sbjct: 334 HLFALEQGQQIHGYA--IRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAW 391
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I GY+ +G +EAL F M+ GI+P+ V VL AC H +++GK +
Sbjct: 392 NAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI-----H 446
Query: 354 VYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
Y I F +VD+ + G + A+ + E MP + +VV W ++
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQDVVSWTTMI 496
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 233/384 (60%), Gaps = 4/384 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLH 144
F WN +IR Y + A +Y M +G++ PD +T P ++KA + + +G +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
S+ +R G S + ++ + LY+ GD A KVFD+ PE+ L +WN++I G +++G+ +
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ ++ + G +PD T+VS+ SAC +G L L +VH Y+ +V + + N
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS--NV 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRP 323
L+D+Y +CGR++ A +F E+ N SWTS+IVG A NG EA++ F YM + G+ P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+TFVG+L AC H G V+EG +F M+ Y+IEPR H+GCMVDLL RAG +++A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MPM+ NVVIW L+GAC G+ + E+ + +LEP G YV+LSN+YAS W
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
Query: 444 EEVERIRAVMKHRNLAKIPAYSLA 467
+V++IR M + K+P +SL
Sbjct: 443 SDVQKIRKQMLRDGVKKVPGHSLV 466
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 275 MDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVL 332
M A+KVF +I++P NV W ++I GYA G + A + MR SG + P+ T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 333 SACVHGGKVQEGK----------------------HFFEMMKNV---YQI-----EPRFA 362
A V+ G+ H + +V Y++ E
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+ +++ G EEA A+ M +K + L+ AC K G + +G+ V ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 420 QELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
++ + + VL ++YA G EE + + M +N
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 287
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 164/430 (38%), Positives = 235/430 (54%), Gaps = 50/430 (11%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F WN + + Y+R+ PK + +Y+ M V PDCYT P + K + AL++GR+LH
Sbjct: 78 SVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELH 137
Query: 145 SLAVRLGLESNEFCESGFISLYS------------------------------------- 167
V+ GL+SN F + I++YS
Sbjct: 138 CHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDV 197
Query: 168 -----------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
G + ARK F + PER SW A+I G + KEA+ +F ++
Sbjct: 198 ISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
+PD+ TMVSV +AC LG LEL + Y+ K+K K+DT + N+LIDMY KCG ++
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEWIRTYI--DKNKVKNDTFVGNALIDMYFKCGNVE 315
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
+A +F + Q + +WT+M+VG A NG EAL+ F M ++ + P+ VT+VGVLSAC
Sbjct: 316 MALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACT 375
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G V EGK FF M + IEP AHYGCMVDLLG+AG L+EA +++ MPMK N ++W
Sbjct: 376 HTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVW 435
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+GAC + +M E + + ELEP + YV+ NIYA+ W+++ +R VM R
Sbjct: 436 GALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMMDR 495
Query: 457 NLAKIPAYSL 466
+ K P SL
Sbjct: 496 GIKKTPGCSL 505
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 140/303 (46%), Gaps = 34/303 (11%)
Query: 125 PIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDE 181
P+ L +C+ ++ L +Q+HS ++ G+ N ++ +S + GD AR++FD
Sbjct: 17 PLSLFETCKSMYHL---KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDT 73
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
PE + SWN + G S+ K + +++ + + +PD T + L+L
Sbjct: 74 IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
++H +V VK S+ N+LI+MY CG +D+A +F + +V +W +MI GY
Sbjct: 134 RELHCHV--VKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY- 190
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+ I+ + +++ +++ V+ G+V + +F M E
Sbjct: 191 -----------------NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMP-----ERDH 228
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
+ M+D R +EA + M +K + ++ AC + G +++GEW+ +
Sbjct: 229 VSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTY 288
Query: 419 LQE 421
+ +
Sbjct: 289 IDK 291
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/407 (39%), Positives = 237/407 (58%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L+ ++ I + +++ WN +I Y + E A+ + + + G+
Sbjct: 453 AKCGSLMDARNVFERISKQNVVA-------WNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T +L ALE+G+ + SL +R G ES+ + +S++ GD A +
Sbjct: 506 PDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNL 565
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ PER L SWN IIAG Q G + A D F +++ G +PD +T + +AC S L
Sbjct: 566 FNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEAL 625
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++H + ++ D ++ LI MY KCG +D A+ VF + + NV SWTSMI
Sbjct: 626 TEGRRLHALI--TEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA +G EAL+ F M++ G++P+ +TFVG LSAC H G ++EG H FE MK+ + IE
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIE 742
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGCMVDL GRAGLL EA + M +K + +WG L+GAC+ +V++ E VA+
Sbjct: 743 PRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQK 802
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL+P DG YV+LSNIYA+ G+W+EV ++R VM R + K P S
Sbjct: 803 KLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQS 849
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 187/360 (51%), Gaps = 16/360 (4%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM 112
++ + +KC N QI+ + + + WN ++ Y + ++A ++ M
Sbjct: 144 MLISMYAKCGNTNSAKQIFDEMPDKDV-------YSWNLLLGGYVQHRRYEEAFRLHEQM 196
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
+ GV PD YT +L A ++ G +L SL + G +++ F + I+++ K G
Sbjct: 197 VQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGV 256
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
+ A KVF+ P R L +W ++I GL++ + K+A ++F +++ G +PD V VS+ AC
Sbjct: 257 DDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKAC 316
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LE +VH + +V ++ + +L+ MY KCG M+ A +VF + NV S
Sbjct: 317 NHPEALEQGKRVHARMKEV--GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVS 374
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MM 351
WT+MI G+A +G EA F+ M ESGI PN VTF+ +L AC +++G+ + ++
Sbjct: 375 WTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRII 434
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC---EKFGN 408
K Y + R ++ + + G L +AR + E + K NVV W ++ A EK+ N
Sbjct: 435 KAGYITDDRVR--TALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDN 491
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 173/366 (47%), Gaps = 5/366 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I R K+A +++ M GV PD +LKA ALE G+++H+
Sbjct: 274 WTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMK 333
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+GL++ + + +S+Y+K G E A +VF+ R + SW A+IAG +Q GR +EA
Sbjct: 334 EVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFL 393
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + + G EP+ VT +S+ AC L+ Q+H + +K+ +D + +L+ M
Sbjct: 394 FFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRI--IKAGYITDDRVRTALLSM 451
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF I + NV +W +MI Y + + A+ F + + GI+P+ TF
Sbjct: 452 YAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTF 511
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L+ C ++ GK ++ E +V + G L A + MP
Sbjct: 512 TSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP 570
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVE 447
+ ++V W ++ + G + K +QE D + L N AS E
Sbjct: 571 ER-DLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629
Query: 448 RIRAVM 453
R+ A++
Sbjct: 630 RLHALI 635
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 142/271 (52%), Gaps = 4/271 (1%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G ++H+ ++ + F + IS+Y+K G+ A+++FDE P++ + SWN ++ G Q
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
R +EA + + + G +PD T V + +AC +++ ++ + + + +D
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLI--LNAGWDTDL 240
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +LI+M+ KCG +D A KVF + + ++ +WTSMI G A + +A + F M E
Sbjct: 241 FVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEE 300
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G++P+ V FV +L AC H +++GK MK V ++ ++ + + G +E+
Sbjct: 301 GVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMED 359
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
A V + NVV W ++ + G ++
Sbjct: 360 ALE-VFNLVKGRNVVSWTAMIAGFAQHGRME 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 124/272 (45%), Gaps = 11/272 (4%)
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC---GSLGDLELALQVHKY 247
NA + LS+ G+ EA+ + + + + T S+ C +LGD E ++H +
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGE---RIHNH 129
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ SK + D M N LI MY KCG + A ++F E+ +V SW ++ GY +
Sbjct: 130 I--KFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYE 187
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
EA M + G++P+ TFV +L+AC V +G F ++ N F +
Sbjct: 188 EAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTA-L 246
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+++ + G +++A + +P + +++ W ++ + K + + ++E D
Sbjct: 247 INMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPD 305
Query: 428 G-AYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
A+V L E+ +R+ A MK L
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGL 337
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/398 (38%), Positives = 240/398 (60%), Gaps = 5/398 (1%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLK 129
YAH + + + + F WN +IR Y + A +Y M +G++ PD +T P ++K
Sbjct: 71 YAHKVFSKIEKPINV-FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
A + + +G +HS+ +R G S + ++ + LY+ GD A KVFD+ PE+ L +
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WN++I G +++G+ +EA+ ++ + G +PD T+VS+ SAC +G L L +VH Y+
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+V + + N L+D+Y +CGR++ A +F E+ N SWTS+IVG A NG EA
Sbjct: 250 KVGLTRNLHSS--NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 310 LDCFHYMRES-GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
++ F YM + G+ P +TFVG+L AC H G V+EG +F M+ Y+IEPR H+GCMV
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLL RAG +++A ++ MPM+ NVVIW L+GAC G+ + E+ + +LEP G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
YV+LSN+YAS W +V++IR M + K+P +SL
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSL 465
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 275 MDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVL 332
M A+KVF +I++P NV W ++I GYA G + A + MR SG + P+ T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 333 SACVHGGKVQEGK----------------------HFFEMMKNV---YQI-----EPRFA 362
A V+ G+ H + +V Y++ E
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+ +++ G EEA A+ M +K + L+ AC K G + +G+ V ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 420 QELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
++ + + VL ++YA G EE + + M +N
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 287
>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 581
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 231/385 (60%), Gaps = 5/385 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN II Y R P KAL + M++ V D TL VL A + A+++G
Sbjct: 159 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 218
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L V G E N + S +S+Y+K G E+AR+VF+ PER + W ++IAG +Q GR
Sbjct: 219 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 278
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV-FQVKSKQKSDTLML 262
KEA+D+F ++ G + DD T+ +V S+CG +G L+L +H Y K+ S +
Sbjct: 279 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELS---VK 335
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGI 321
NSLIDMY KCG ++ AY++F + + +V +WT MI+G+A NGL EALD F M E +
Sbjct: 336 NSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKV 395
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN V F+GVL+AC HGG V++G H F M VY + PR HYGCMVDLLGRA LL EA
Sbjct: 396 MPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAE 455
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
++ MP+ +VV+W L+ AC G V + E+ A+ +++LEP G +V+LSN+YA+
Sbjct: 456 QFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTL 515
Query: 442 LWEEVERIRAVMKHRNLAKIPAYSL 466
W +V +R M + +K P S
Sbjct: 516 RWVDVNNVRTGMGNSRTSKKPGCSF 540
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 146/284 (51%), Gaps = 6/284 (2%)
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
A + D Y+L I + A+ ++ +L++G Q H+L+++L L S+ F + I++YS
Sbjct: 87 ANMTLDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPAS 146
Query: 175 ARKVFDENPE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
AR V D P + SWN IIAG + G +A+ F + K D+VT+++V AC
Sbjct: 147 ARLVLDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 206
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
G +++ H V V + + + + +SL+ MY KCG ++ A +VF + + NV
Sbjct: 207 ARTGAMKVGSLCHALV--VLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVC 264
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
WTSMI G +G EA+D F M+ +G++ + T V+S+C G + G++
Sbjct: 265 WTSMIAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCD 324
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ + + ++D+ + G + +A + G+ K +V W
Sbjct: 325 G-HGLGKELSVKNSLIDMYSKCGDVNKAYQIFHGLT-KRDVFTW 366
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC-----GRM 275
D+ ++ SA + L++ Q H +K SD+ +LN+LI+MY C R+
Sbjct: 92 DNYSLNIAISAAARVPSLDVGSQFH--ALSLKLSLASDSFVLNALINMYSSCNYPASARL 149
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
L W D V SW ++I GY G+ N+AL FH M + +R + VT + VL AC
Sbjct: 150 VLDSAPRWASD---VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 206
Query: 336 VHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
G ++ G H ++ N ++I +V + + G++EEAR + MP + NV
Sbjct: 207 ARTGAMKVGSLCHALVVL-NGFEINCYIG--SSLVSMYAKCGMVEEARRVFNRMPER-NV 262
Query: 394 VIWGCLMGACEKFGNVK 410
V W ++ C + G K
Sbjct: 263 VCWTSMIAGCTQSGRFK 279
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 253/472 (53%), Gaps = 65/472 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------- 86
L C++L L I+A++IRTH++ AA
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPN 83
Query: 87 -FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +IR ++ + P +A Y+ R G+LPD T P ++K+ +L + +G Q H
Sbjct: 84 LFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHG 143
Query: 146 LAVRLGLESNEFCESGFISLYS-------------------------------KAGDFEK 174
++ G E + + ++ + +Y+ K GD E
Sbjct: 144 HIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVES 203
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARK+FD+ PE+ L +W+ +I+G +Q+ +A+++F L+ G ++ MVSV S+C
Sbjct: 204 ARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAH 263
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG LEL + H YV VK+ + ++ +L+DMY +CG +D A VF ++ + + SWT
Sbjct: 264 LGALELGERAHDYV--VKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWT 321
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
++I G A +G + +L F M E+G+ P +TF VLSAC HGG V+ G FE MK
Sbjct: 322 ALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRD 381
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+++EPR HYGCMVDLLGRAG LEEA V MP+K N +WG L+GAC N ++GE
Sbjct: 382 HRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGER 441
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V K L +L P G YV+LSNIYA+ WE+V +R +MK + L K P +SL
Sbjct: 442 VGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSL 493
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 140/317 (44%), Gaps = 47/317 (14%)
Query: 133 QLFALEIGRQL------HSLAVRLGLESNEFCESGFISL----YSKAGDFEKARKVFDEN 182
+LF+LE L H+ +R + + F S I+ S + A ++F +
Sbjct: 20 KLFSLETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
L +NA+I G S +A ++ ++ G PD++T + +C L + +
Sbjct: 80 QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYG-------------------------------K 271
Q H ++ +K + D + NSL+ MY K
Sbjct: 140 QAHGHI--IKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNK 197
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG ++ A K+F ++ + N+ +W++MI GYA N ++A++ F ++ G+R N V V
Sbjct: 198 CGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSV 257
Query: 332 LSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+S+C H G ++ G+ + ++KN + +VD+ R G +++A + E +P +
Sbjct: 258 ISSCAHLGALELGERAHDYVVKNGMTLNLILG--TALVDMYARCGSIDKAVWVFEDLPER 315
Query: 391 ANVVIWGCLMGACEKFG 407
+ + W L+ G
Sbjct: 316 -DTLSWTALIAGLAMHG 331
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/382 (40%), Positives = 231/382 (60%), Gaps = 13/382 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL----- 143
W +I+ Y+++ P +A+ + R D TL +VL A QL +G+++
Sbjct: 207 WTTLIQAYSKMGYPSEAIAAFF---RMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMD 263
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H L + S+ F + + +Y K G AR++F P + L SWN++I+GL+ G
Sbjct: 264 HHL---FDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLF 320
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEA+ MF ++ G +PD VT+V V ++C +LGDLEL VH Y+ K+ K+D + N
Sbjct: 321 KEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYI--DKNHMKADGYVAN 378
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+DMY KCG +D A+ VF + +V S+T+MIVG+A +G A+ AL F M G+RP
Sbjct: 379 ALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRP 438
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+HVT VGVLSAC H G ++EG+ F+ M +Y ++P+ HYGCMVDLLGRAGL+ EA A
Sbjct: 439 DHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAF 498
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
MP+ + +WG L+GAC+ V++GE V + L E+EP DGAY+++SNIY+S W
Sbjct: 499 TNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSANRW 558
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
+ + R MK N+ K P S
Sbjct: 559 RDALKWRKAMKQNNIKKTPGCS 580
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 180/366 (49%), Gaps = 17/366 (4%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNII 93
H +I A++ T P + + +K T+LLQ + A I+ S A F N +
Sbjct: 46 HASIIKANTTRSTTTLP---IISLCTKITSLLQQDVHLADSIQNLWYASSLANFCHQNPV 102
Query: 94 RLY--------TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
++ T +Y M G+ PD YTLP +LKA Q A Q+H+
Sbjct: 103 YIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHA 162
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+++ GL SN F ++ + Y+ +G E KVFD+ P L SW +I S+ G E
Sbjct: 163 HSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSE 222
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
AI F + D +T+V V SAC LGD L ++ Y+ SD + N+L
Sbjct: 223 AIAAFF---RMNCTADRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNAL 279
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG+ LA ++F + N+ SW SMI G A GL EAL F M+ G++P+
Sbjct: 280 LDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDS 339
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VT VGVL++C + G ++ GK + KN + + A+ +VD+ + G +++A +
Sbjct: 340 VTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVAN--ALVDMYAKCGSIDQAFMVF 397
Query: 385 EGMPMK 390
+ M K
Sbjct: 398 QAMKCK 403
>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
Length = 493
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/384 (41%), Positives = 229/384 (59%), Gaps = 3/384 (0%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN II Y R P KAL + M++ V D TL VL A + A+++G
Sbjct: 71 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 130
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L V G E N + S +S+Y+K G E+AR+VF+ PER + W ++IAG +Q GR
Sbjct: 131 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 190
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEA+D+F ++ G + DD T+ +V S+CG +G L+L +H Y + + N
Sbjct: 191 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYC--DGHGLGKELSVKN 248
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
SLIDMY KCG ++ AY++F + + +V +WT MI+G+A NGL EALD F M E +
Sbjct: 249 SLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVM 308
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN V F+GVL+AC HGG V++G H F M VY + PR HYGCMVDLLGRA LL EA
Sbjct: 309 PNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQ 368
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MP+ +VV+W L+ AC G V + E+ A+ +++LEP G +V+LSN+YA+
Sbjct: 369 FIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTLR 428
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W +V +R M + +K P S
Sbjct: 429 WVDVNNVRTGMGNSRTSKKPGCSF 452
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 144/279 (51%), Gaps = 6/279 (2%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D Y+L I + A+ ++ +L++G Q H+L+++L L S+ F + I++YS AR V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 180 DENPE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
D P + SWN IIAG + G +A+ F + K D+VT+++V AC G
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+++ H V V + + + + +SL+ MY KCG ++ A +VF + + NV WTSMI
Sbjct: 124 MKVGSLCHALV--VLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMI 181
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G +G EA+D F M+ +G++ + T V+S+C G + G++ + +
Sbjct: 182 AGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDG-HGL 240
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ ++D+ + G + +A + G+ K +V W
Sbjct: 241 GKELSVKNSLIDMYSKCGDVNKAYQIFHGLT-KRDVFTW 278
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC-----GRM 275
D+ ++ SA + L++ Q H +K SD+ +LN+LI+MY C R+
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFH--ALSLKLSLASDSFVLNALINMYSSCNYPASARL 61
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
L W D V SW ++I GY G+ N+AL FH M + +R + VT + VL AC
Sbjct: 62 VLDSAPRWASD---VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 118
Query: 336 VHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
G ++ G H ++ N ++I +V + + G++EEAR + MP + NV
Sbjct: 119 ARTGAMKVGSLCHALVVL-NGFEINCYIG--SSLVSMYAKCGMVEEARRVFNRMPER-NV 174
Query: 394 VIWGCLMGACEKFGNVK 410
V W ++ C + G K
Sbjct: 175 VCWTSMIAGCTQSGRFK 191
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 252/443 (56%), Gaps = 43/443 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC N+ +++ + +++ WN++I + + +ALD++ M + V
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVS-------WNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARK 177
PD TL V+ A L A+++G+++H V+ L ++ + F+ +Y+K ++AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 178 VFDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEA 206
+FD P ER + SWNA+IAG +Q+G +EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLML 262
+ +F LK+ P + ++ AC L +L L +Q H +V F+ +S ++ D +
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
NSLIDMY KCG ++ Y VF ++ + + SW +MI+G+A NG NEAL+ F M ESG +
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+T +GVLSAC H G V+EG+H+F M + + P HY CMVDLLGRAG LEEA++
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
M+E MPM+ + VIWG L+ AC+ N+ +G++VA+ L E+EP + G YV+LSN+YA G
Sbjct: 551 MIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGK 610
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WE+V +R M+ + K P S
Sbjct: 611 WEDVMNVRKSMRKEGVTKQPGCS 633
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 44/351 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + + ++AL + M + G + + Y+ VL A L + G Q+HSL
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ + S + +YSK G+ A++VFDE +R + SWN++I Q+G A EA+D
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + EPD+VT+ SV SAC SL +++ +VH V + K ++D ++ N+ +DM
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK-NDKLRNDIILSNAFVDM 298
Query: 269 YGKCGRMDLAYKV-------------------------------FWEIDQPNVSSWTSMI 297
Y KC R+ A + F ++ + NV SW ++I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG--------KHFFE 349
GY NG EAL F ++ + P H +F +L AC ++ G KH F+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G +EE + M M+ + V W ++
Sbjct: 419 FQSGE---EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 147/301 (48%), Gaps = 39/301 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER-------------KL 187
R +H+ ++ G + F ++ I YSK G E R+VFD+ P+R KL
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 188 G------------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G +WN++++G +Q R +EA+ F + K GF ++ + SV
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
SAC L D+ +QVH + KS SD + ++L+DMY KCG ++ A +VF E+ N
Sbjct: 160 SACSGLNDMNKGVQVHSLI--AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW S+I + NG A EALD F M ES + P+ VT V+SAC ++ G+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-----IWGCLMGACE 404
+ ++ VD+ + ++EAR + + MP++ NV+ I G M A
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAAST 336
Query: 405 K 405
K
Sbjct: 337 K 337
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 249/444 (56%), Gaps = 52/444 (11%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF---MSRAGVLPDCYTLPIV 127
YAH I M F WN IIR ++ + K + I +F MS V P+ +T P V
Sbjct: 77 YAHKIFNQM--PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS-------------------- 167
LKA + ++ G+Q+H LA++ G +EF S + +Y
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 168 -------------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+ GD + AR +FD+ +R + SWN +I+G S +G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
K+A+++F +KK P+ VT+VSV A LG LEL +H Y S + D ++
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA--EDSGIRIDDVLG 312
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
++LIDMY KCG ++ A VF + + NV +W++MI G+A +G A +A+DCF MR++G+R
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ V ++ +L+AC HGG V+EG+ +F M +V +EPR HYGCMVDLLGR+GLL+EA
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ MP+K + VIW L+GAC GNV+MG+ VA L ++ P GAYV LSN+YAS+G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W EV +R MK +++ K P SL
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSL 516
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 233/377 (61%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL+++ M + V PD T+ VL A Q ++E+GRQ+HS
Sbjct: 166 WNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWID 225
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G E A +F+ + + SWN +I G + KEA+
Sbjct: 226 DHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALL 285
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVT+VS+ AC LG +++ +H Y+ + + + SLIDM
Sbjct: 286 LFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDM 345
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF + ++SSW +MI G+A +G AN D F MR++GI P+ +TF
Sbjct: 346 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITF 405
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H GK+ G+H F+ M Y I P+ HYGCM+DLLG +GL +EA+ M++ MP
Sbjct: 406 VGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP 465
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC + GN+++ E A++L ++EP + G+YV+LSNIYA+ G W+EV +
Sbjct: 466 MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAK 525
Query: 449 IRAVMKHRNLAKIPAYS 465
+RA++ + + K+P S
Sbjct: 526 VRALLNGKGMKKVPGCS 542
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 175/349 (50%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++R Y P AL +Y+ M G+LP+ YT P +LK+ + A E G+Q+H +
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKV------------------------------ 178
+LG E + + + IS+Y++ G E A KV
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 179 -FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FDE P + + SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG+++ A +F + +V SW ++I
Sbjct: 214 VELGRQVHSWIDD--HGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT V +L AC H G + G+ H + + K +
Sbjct: 272 GGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVY-IDKKLK 330
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + M K+ N +I+G M
Sbjct: 331 DVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 379
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN W +M+ GYA + AL + M G+ PN TF +L +C
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 338 GGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+EG+ ++K Y EP + ++ + + G LE+A + + + +VV +
Sbjct: 79 SKAFEEGQQIHGHVLKLGY--EPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHR-DVVSY 135
Query: 397 GCLMGACEKFGNVKMGEWVAKHL--QELEPWSDGAYVVLSNIYASRGLWEE-VERIRAVM 453
L+ GN++ + + + +++ W+ + + YA G ++E +E + +M
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWN-----AMISGYAETGSYKEALELFKEMM 190
Query: 454 K 454
K
Sbjct: 191 K 191
>gi|125562361|gb|EAZ07809.1| hypothetical protein OsI_30067 [Oryza sativa Indica Group]
Length = 642
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/379 (41%), Positives = 228/379 (60%), Gaps = 3/379 (0%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN II Y R P KAL + M++ V D TL VL A + A+++G
Sbjct: 71 SDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLC 130
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L V G E N + S +S+Y+K G E+AR+VF+ PER + W ++IAG +Q GR
Sbjct: 131 HALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRF 190
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEA+D+F ++ G + DD T+ +V S+CG +G L+L +H Y + + N
Sbjct: 191 KEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCD--GHGLGKELSVKN 248
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
SLIDMY KCG ++ AY++F + + +V +WT MI+G+A NGL EALD F M E +
Sbjct: 249 SLIDMYSKCGDVNKAYQIFRGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVM 308
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN V F+GVL+AC HGG V++G H F M VY + PR HYGCMVDLLGRA LL EA
Sbjct: 309 PNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQ 368
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MP+ +VV+W L+ AC G V + E+ A+ +++LEP G +V+LSN+YA+
Sbjct: 369 FIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYATTSR 428
Query: 443 WEEVERIRAVMKHRNLAKI 461
W +V +R M + ++I
Sbjct: 429 WVDVNNVRTGMGNSRTSQI 447
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D Y+L I + A+ ++ +L++G Q H+L+++L L S+ F + I++YS AR V
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLVL 63
Query: 180 DENPE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
D P + SWN IIAG + G +A+ F + K D+VT+++V AC G
Sbjct: 64 DSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGA 123
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+++ H V V + + + + +SL+ MY KCG ++ A +VF + + NV WTSMI
Sbjct: 124 MKVGSLCHALV--VLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMI 181
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G +G EA+D F M+ +G++ + T V+S+C G + G++ + +
Sbjct: 182 AGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDG-HGL 240
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ ++D+ + G + +A + G+ K +V W ++
Sbjct: 241 GKELSVKNSLIDMYSKCGDVNKAYQIFRGL-TKRDVFTWTVMI 282
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC-----GRM 275
D+ ++ SA + L++ Q H +K SD+ +LN+LI+MY C R+
Sbjct: 4 DNYSLNIAISAAARVPSLDVGSQFH--ALSLKLSLASDSFVLNALINMYSSCNYPASARL 61
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
L W D V SW ++I GY G+ N+AL FH M + +R + VT + VL AC
Sbjct: 62 VLDSAPRWASD---VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVAC 118
Query: 336 VHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
G ++ G H ++ N ++I +V + + G++EEAR + MP + NV
Sbjct: 119 ARTGAMKVGSLCHALVVL-NGFEINCYIG--SSLVSMYAKCGMVEEARRVFNRMPER-NV 174
Query: 394 VIWGCLMGACEKFGNVK 410
V W ++ C + G K
Sbjct: 175 VCWTSMIAGCTQSGRFK 191
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 162/410 (39%), Positives = 238/410 (58%), Gaps = 36/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I Y R P++AL+++ M G V PD T+ V+ S QL LE+GR+LH
Sbjct: 189 WNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYV 248
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKA-------------------------------R 176
G+ + + +Y K GD E+A R
Sbjct: 249 ESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDAR 308
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
KVFDE PER + WNA++ G Q R KEA+ +F +++ EPDD+TMV++ SAC LG
Sbjct: 309 KVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLG 368
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
LE+ + VH Y+ ++ S ++ML + L+DMY KCG ++ A +VF EI + N +WT+
Sbjct: 369 ALEMGMWVHHYI---DRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTA 425
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI G A +G A+ A+ F M E G++P+ +TF+GVLSAC H G V+EG+ FF +M + Y
Sbjct: 426 MISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKY 485
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+E + HY CMVDLLGRAG L+EA +V MPM+ + V+WG L AC GN+ +GE
Sbjct: 486 HLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKA 545
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L EL+P G YV+L+N+YA + ++ +++R +M+H + K+P S
Sbjct: 546 AMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 595
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 160/346 (46%), Gaps = 47/346 (13%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+ L +Y + R+ PD T P +LKA +L G + + LG ++ F + +
Sbjct: 104 RCLPLYCSLLRSA-RPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAM 162
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDD 222
+ +ARK+FD + R L SWN +I G + G +EA++MF + G PD+
Sbjct: 163 HFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDE 222
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VTM+ V S L DLEL ++H YV + ++N ++DMY KCG ++ A VF
Sbjct: 223 VTMIGVVSGSAQLRDLELGRRLHGYV--ESHGVRCTVRLMNVVMDMYIKCGDLERAKSVF 280
Query: 283 WEIDQPNVSSWTSMIVGYAANGLAN-------------------------------EALD 311
ID+ + SWT+MIVGYA GL + EAL
Sbjct: 281 EGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALR 340
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM---- 367
FH M+E+ + P+ +T V +LSAC G ++ G M + I+ R M
Sbjct: 341 LFHDMQEAMVEPDDITMVNLLSACSQLGALEMG------MWVHHYIDRRRVSLSVMLGTN 394
Query: 368 -VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
VD+ + G +E+A + + +P K N + W ++ G+ +
Sbjct: 395 LVDMYSKCGNIEKAIRVFKEIPEK-NALTWTAMISGLANHGHADVA 439
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + + K+AL ++ M A V PD T+ +L A QL ALE+G +H
Sbjct: 320 FPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHY 379
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
R + + + + +YSK G+ EKA +VF E PE+ +W A+I+GL+ G A A
Sbjct: 380 IDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVA 439
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-----LALQVHKYVFQVKSKQKSDTLM 261
I F + + G +PD++T + V SAC G ++ +L V KY + K K S
Sbjct: 440 IKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYS---- 495
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
++D+ G+ G +D A + + +P+ W ++ +G
Sbjct: 496 --CMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHG 537
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 259/476 (54%), Gaps = 47/476 (9%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQL--------NQIYAHIIR----- 76
T R + S++ +FLD H ++ L KC +L+QL QI+A IR
Sbjct: 12 TSRTITSNSSSQNFLDCH------LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPP 65
Query: 77 ------THMLH---------SYSAA----------FHWNNIIRLYTRLEAPKKALDIYIF 111
H++ S++A F WN +IR + E P A++++
Sbjct: 66 QNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQ 125
Query: 112 MSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M A +LPD +T P + KA +L + +G +HS+ VR G +S F ++ + +YS G
Sbjct: 126 MHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLG 185
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
A +VF+ R +WN++I G + +G EA+ ++ + G EPD TMVS+ S
Sbjct: 186 SLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLS 245
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC LG L L +VH Y+ +V Q N+L+D+Y KCG A KVF E+++ +V
Sbjct: 246 ACVELGALALGERVHMYMVKVGLVQNQHAS--NALLDLYSKCGNFRDAQKVFDEMEERSV 303
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWTS+IVG A NGL NEAL F + G++P+ +TFVGVL AC H G + EG ++F
Sbjct: 304 VSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRR 363
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
MK Y I PR H+GCMVDLL RAG + +A + MP+ N VIW L+GAC G+++
Sbjct: 364 MKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+GE +Q LE G +V+LSN+YAS W +V+ +R +M + + K P YSL
Sbjct: 424 LGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSL 479
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 173/426 (40%), Positives = 243/426 (57%), Gaps = 49/426 (11%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +IR + P AL ++I M V P+C+T P V KA + L GRQ+H
Sbjct: 77 FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHG 136
Query: 146 LAVRLGLESNEFCESGFISLY--------------------------------------- 166
LAV+ GL+S+EF S + +Y
Sbjct: 137 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 196
Query: 167 -------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ G+ E AR +FDE P+R + SWN +IAG +Q G KEA+++F ++
Sbjct: 197 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 256
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ VT+VSV A LG LEL VH Y V++ D ++ ++LIDMY KCG ++ A
Sbjct: 257 PNYVTLVSVLPAMSRLGALELGKWVHLYA--VRNNIGVDDVLGSALIDMYAKCGSIEKAL 314
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF + + NV +W+++I G A +G A + LD F M +G+ P+ VT++G+LSAC H G
Sbjct: 315 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 374
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V EG+ FF+ M V +EPR HYGCMVDLLGRAGLLEE+ ++ MP+K + VIW L
Sbjct: 375 LVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKAL 434
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+GAC+ GNV+MG+ VA+HL EL P G+YV LSNIYAS G WE V ++R +MK ++
Sbjct: 435 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVR 494
Query: 460 KIPAYS 465
K P S
Sbjct: 495 KDPGCS 500
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 164/390 (42%), Gaps = 70/390 (17%)
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI--SLYS 167
IF S + P P C+ ++ +QLH+ ++ + + + S S
Sbjct: 5 IFTSTTSLWPPSSFFP------CK--TMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVS 56
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMV 226
D + ARK+F S+N +I LS+ +A+ +FI + + C EP+ T
Sbjct: 57 DHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFP 116
Query: 227 SVTSACGSLGDLELALQVH------------------------------------KYVF- 249
SV ACG L QVH + VF
Sbjct: 117 SVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFV 176
Query: 250 -------QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
K + D ++ N +ID Y + G +++A +F E+ Q +V SW MI GYA
Sbjct: 177 DGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQ 236
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPR 360
+G EA++ F M+ + + PN+VT V VL A G ++ GK H + + N+ ++
Sbjct: 237 SGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNI-GVDDV 295
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
++D+ + G +E+A + EG+P K NVV W ++ G K H +
Sbjct: 296 LG--SALIDMYAKCGSIEKALQVFEGLP-KRNVVTWSTIIAGLAMHGRAKD---TLDHFE 349
Query: 421 ELE-----PWSDGAYVVLSNIYASRGLWEE 445
++E P SD Y+ L + + GL E
Sbjct: 350 DMERAGVMP-SDVTYIGLLSACSHAGLVNE 378
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 177/476 (37%), Positives = 260/476 (54%), Gaps = 47/476 (9%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQL--------NQIYAHIIR----- 76
T R + S++ +FLD H ++ L KC +L+QL QI+A IR
Sbjct: 12 TSRTITSNSSSQNFLDCH------LSFILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPP 65
Query: 77 ------THMLH---------SYSAA----------FHWNNIIRLYTRLEAPKKALDIYIF 111
H++ S++A F WN +IR + E P A++++
Sbjct: 66 QNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFAESENPSPAVELFSQ 125
Query: 112 MSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M A +LPD +T P + KA +L + +G +HS+ VR G +S F ++ + +YS G
Sbjct: 126 MHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFG 185
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
E A +VF+ R +WN++I G + +G EA+ ++ + G EPD TMVS+ S
Sbjct: 186 FAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLS 245
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC LG L L +VH Y+ +V Q N+L+D+Y KCG A KVF E+++ +V
Sbjct: 246 ACVELGALALGERVHMYMVKVGLVQNQHAS--NALLDLYSKCGNFRDAQKVFDEMEERSV 303
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWTS+IVG A NGL NEAL F + G++P+ +TFVGVL AC H G + EG ++F
Sbjct: 304 VSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRR 363
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
MK Y I PR H+GCMVDLL RAG + +A + MP+ N VIW L+GAC G+++
Sbjct: 364 MKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLE 423
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+GE +Q LE G +V+LSN+YAS W +V+ +R +M + + K P YSL
Sbjct: 424 LGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLMKGVKKTPGYSL 479
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/470 (34%), Positives = 262/470 (55%), Gaps = 63/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML----------------HSYSAA--------------F 87
L +C+N+ +L QI+ +++T ++ +S S A F
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR Y+ + P++AL +Y M V + YT P +LKA + ALE +Q+H+
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHI 144
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-------------------------- 181
+++G S + + +++YSK+GD + AR +FD+
Sbjct: 145 IKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAY 204
Query: 182 -----NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
PER + SW ++I+G G+ KEA+++F ++ G + D+V +VS AC LG
Sbjct: 205 EIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLG 264
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ +H Y+ K + + D ++ LIDMY KCG ++ A +VF ++++ VS WT+M
Sbjct: 265 VLDQGKWIHAYI--KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA +G EAL+ F M+ +G+ PN +TF G+L+AC H G V E K FE M+ ++
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+P HYGCMVDLLGRAGLL+EA ++E MP+K N IWG L+ AC GN+++G+ +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
K L +++P G Y+ L++I+A+ G W + R+R MK + ++K+P S+
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSV 492
>gi|296089760|emb|CBI39579.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/435 (39%), Positives = 245/435 (56%), Gaps = 36/435 (8%)
Query: 66 QLNQIYAHIIRTHMLHSY-------------------SAAFH---------WNNIIRLYT 97
QL QI+AHI+R H+ S + FH +N++I+ Y+
Sbjct: 24 QLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYS 83
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
+ +L ++ M G+ PD +T +LK+ + IG+ +H + + +G E
Sbjct: 84 LCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSS 143
Query: 158 CESGFISLYSKAGDFEKARKVFDENPERKLG-----SWNAIIAGLSQDGRAKEAIDMFIG 212
G I LY+ G E A+KVFDE +R + SWN++IAGL Q GR EA+++F
Sbjct: 144 IRIGIIDLYTSCGRMEDAKKVFDEMLDRDMRDRSVVSWNSMIAGLEQSGRDGEALELFRE 203
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGK 271
+ GFEPDD T+V++ C LG +++ +H Y S+ D + + NSL+D Y K
Sbjct: 204 MWDHGFEPDDATVVTILPVCARLGAVDVGEWIHSYA--ESSRLLRDFISVGNSLVDFYCK 261
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG ++ A++VF E+ Q NV SW +MI G NG D F M G+RPN TFVGV
Sbjct: 262 CGILETAWRVFNEMPQKNVVSWNAMISGLTFNGKGELGADLFEEMINKGVRPNDATFVGV 321
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
LS C H G V+ G++ F M +++EP+ H+GCMVDLL R G +EEAR +V MPM+
Sbjct: 322 LSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFGCMVDLLARNGCMEEARDLVRTMPMRP 381
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
N V+WG L+ A G+VK E K L ELEPW+ G YV+LSN+YA G W+EVE++RA
Sbjct: 382 NAVLWGSLLSAYRTIGDVKHAECAVKELIELEPWNSGNYVLLSNVYAEDGKWDEVEKVRA 441
Query: 452 VMKHRNLAKIPAYSL 466
+MK +N+ K P S+
Sbjct: 442 LMKEKNIRKNPGQSM 456
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 235/379 (62%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + P +AL +Y M G PD T+ ++ A +L L +G +LHS
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ S +++Y+K GD + AR+VFD+ ++ + +W+A+I G ++ R+ EA+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 209 MFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-SLI 266
+F + P++VT+++V SAC LGDLE VH Y+ + QK ++ LN SLI
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT---QKGHSVSLNNSLI 324
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG +D A ++F + ++ SW SM+ G A +GL EAL FH M+ + ++P+ +
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEI 384
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVL+AC H G VQEGK F ++ +Y + + HYGCMVDLL RAGLL EAR +
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG ++GAC + N+++GE A+ L ELEP +DG Y++LSNIYA R +W EV
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEV 504
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+++R +M + + K P S
Sbjct: 505 KKVRELMNEKGIQKTPGCS 523
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 197/373 (52%), Gaps = 19/373 (5%)
Query: 67 LNQIYAHIIRTHML---HSYSAAFH--------WNNIIRLYTRLEAPKKALDIYIFM-SR 114
LN++ AH++ L ++YS H WN+++R + P++AL Y M R
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
+ +PD +T P +LK L ++G+ LH V+ L S+ + E+ +++Y+ GD +
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR +F+ R W ++I+G ++ EA+ ++ +++ GF PD+VTM ++ SAC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L DL + +++H ++ ++ K ++ ++L++MY KCG + A +VF ++ +V +W+
Sbjct: 193 LKDLGVGMKLHSHIREM--DMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWS 250
Query: 295 SMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I GY N + EAL F + S +RPN VT + V+SAC G ++ G+ + +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG--ACEKFGNVKM 411
Q + ++D+ + G ++ A+ + + M K +++ W ++ A G +
Sbjct: 311 T-QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGLALHGLGREAL 368
Query: 412 GEWVAKHLQELEP 424
++ +L+P
Sbjct: 369 AQFHLMQTTDLQP 381
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 242/432 (56%), Gaps = 38/432 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK 129
YA+ + T + H+ + +NNII+ L + PK ++ +Y + AG+ PD Y+ P LK
Sbjct: 28 YAYSLFTSITHA-PDIYLYNNIIKALSSSPTHPKASIFLYNNIQLAGLRPDSYSFPFALK 86
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS---------------------- 167
A + +++ GRQLHS ++R GL S+ + F+ +YS
Sbjct: 87 AVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDARKMFDGMSMSTG 146
Query: 168 -------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
K GD AR +F+ P+R + SW A+I G +Q R +AI +F ++
Sbjct: 147 DVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITGYAQANRPHDAIALFRRMQ 206
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
EPD++ M+ +AC LG LEL + Y+ ++ ++ + N+LIDMY K G
Sbjct: 207 LENVEPDEIAMLVALTACARLGALELGEWIRHYIDRL-GLLTTNIPLNNALIDMYAKSGD 265
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A +VF ++ + +WT+MI G A +GL EAL+ F M + ++PN +TF+ +LSA
Sbjct: 266 IKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSA 325
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G VQ G+ +F M + Y IEP+ HYGCM+DLLGRAG L+EA+ ++ MP + N V
Sbjct: 326 CSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAV 385
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+ AC G+ ++GE +HL ELEP + G Y +LSNIYASRG W E +R VM
Sbjct: 386 IWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIYASRGRWNESRVVRKVMW 445
Query: 455 HRNLAKIPAYSL 466
+ K+P SL
Sbjct: 446 DAGVKKMPGGSL 457
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 241/426 (56%), Gaps = 35/426 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
Y+H I TH + + +N II+ + E +A+ +Y + + + D Y+LP VLKA
Sbjct: 91 YSHSIFTH--KTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKA 148
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS----------------------- 167
+L A+ +GRQ+H A+ GL S+ + I +YS
Sbjct: 149 VVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFW 208
Query: 168 --------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
K GD + AR +F+ PER + SW A+IAG +Q R EAI MF ++ E
Sbjct: 209 NAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVE 268
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD++ M++ SAC LG LEL +H Y+ K + N+LIDMY KCG+++ A
Sbjct: 269 PDEIAMLAALSACAHLGALELGEWIHNYI--DKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF ++ +V +WTSMI G A +GL EAL+ F M + I+PN +TFV +LSAC H G
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+ G+ +F+ M Y I+P+ HYGCM+DLLGRAG L+EA+ +V GMP +AN IWG L
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ A G+ ++G+ +HL ++EP + G Y +LSNIYA++ W E +R VM+ +
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 460 KIPAYS 465
K+P S
Sbjct: 507 KMPGGS 512
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 126/340 (37%), Gaps = 66/340 (19%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q H + GL+ + S FI S G + +F + +N II LS
Sbjct: 59 QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPE 118
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A EAI ++ + D ++ V A L + + Q+H + + SD +
Sbjct: 119 LATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQA--IGTGLVSDIHV 176
Query: 262 LNSLIDMYGKC-------------------------------GRMDLAYKVFWEIDQPNV 290
+ +LI MY C G +D A +F + + NV
Sbjct: 177 VTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNV 236
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG------ 344
SWT++I GYA NEA+ F M+ + P+ + + LSAC H G ++ G
Sbjct: 237 ISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNY 296
Query: 345 --KH-----------FFEMMKNVYQIEPRFA-----------HYGCMVDLLGRAGLLEEA 380
KH +M +IE + M+D L GL EA
Sbjct: 297 IDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREA 356
Query: 381 RAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWVAK 417
M M +K N + + ++ AC G V+MG W K
Sbjct: 357 LEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFK 396
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/426 (38%), Positives = 241/426 (56%), Gaps = 35/426 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
Y+H I TH + + +N II+ + E +A+ +Y + + + D Y+LP VLKA
Sbjct: 91 YSHSIFTH--KTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKA 148
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS----------------------- 167
+L A+ +GRQ+H A+ GL S+ + I +YS
Sbjct: 149 VVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFW 208
Query: 168 --------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
K GD + AR +F+ PER + SW A+IAG +Q R EAI MF ++ E
Sbjct: 209 NAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVE 268
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD++ M++ SAC LG LEL +H Y+ K + N+LIDMY KCG+++ A
Sbjct: 269 PDEIAMLAALSACAHLGALELGEWIHNYI--DKHGLSKIVPLNNALIDMYAKCGKIEKAL 326
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF ++ +V +WTSMI G A +GL EAL+ F M + I+PN +TFV +LSAC H G
Sbjct: 327 EVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+ G+ +F+ M Y I+P+ HYGCM+DLLGRAG L+EA+ +V GMP +AN IWG L
Sbjct: 387 LVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSL 446
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ A G+ ++G+ +HL ++EP + G Y +LSNIYA++ W E +R VM+ +
Sbjct: 447 LAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVK 506
Query: 460 KIPAYS 465
K+P S
Sbjct: 507 KMPGGS 512
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 126/340 (37%), Gaps = 66/340 (19%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q H + GL+ + S FI S G + +F + +N II LS
Sbjct: 59 QTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKTRPDIYLYNTIIKALSNPE 118
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A EAI ++ + D ++ V A L + + Q+H + + SD +
Sbjct: 119 LATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQA--IGTGLVSDIHV 176
Query: 262 LNSLIDMYGKC-------------------------------GRMDLAYKVFWEIDQPNV 290
+ +LI MY C G +D A +F + + NV
Sbjct: 177 VTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNV 236
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG------ 344
SWT++I GYA NEA+ F M+ + P+ + + LSAC H G ++ G
Sbjct: 237 ISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNY 296
Query: 345 --KH-----------FFEMMKNVYQIEPRFA-----------HYGCMVDLLGRAGLLEEA 380
KH +M +IE + M+D L GL EA
Sbjct: 297 IDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREA 356
Query: 381 RAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWVAK 417
M M +K N + + ++ AC G V+MG W K
Sbjct: 357 LEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFK 396
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 242/407 (59%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L ++++ I + +++ WN +I Y + E AL + + + G+
Sbjct: 459 AKCGSLKDAHRVFEKISKQNVVA-------WNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T +L +LE+G+ +H L ++ GLES+ + +S++ GD A+ +
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNL 571
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ P+R L SWN IIAG Q G+ + A D F +++ G +PD +T + +AC S L
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEAL 631
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++H + ++ D L+ LI MY KCG ++ A++VF ++ + NV SWTSMI
Sbjct: 632 TEGRRLHALI--TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIT 689
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA +G EAL+ F+ M++ G++P+ +TFVG LSAC H G ++EG H F+ MK + IE
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIE 748
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGCMVDL GRAGLL EA + M ++ + +WG L+GAC+ NV++ E A+
Sbjct: 749 PRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQK 808
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL+P +G +V+LSNIYA+ G+W+EV ++R VM R + K P S
Sbjct: 809 KLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 183/345 (53%), Gaps = 13/345 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N + QI+ + + + WN ++ Y + ++A ++ M + V
Sbjct: 156 AKCGNTISAKQIFDDMREKDV-------YSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T +L A ++ GR+L++L ++ G +++ F + I+++ K GD A KV
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD P R L +W ++I GL++ GR K+A ++F +++ G +PD V VS+ AC L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E +VH + +V ++ + +++ MY KCG M+ A +VF + NV SWT+MI
Sbjct: 329 EQGKKVHARMKEV--GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQI 357
G+A +G +EA F+ M ESGI PN VTF+ +L AC ++ G+ + +++ Y
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ R ++ + + G L++A + E + K NVV W ++ A
Sbjct: 447 DDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 161/329 (48%), Gaps = 18/329 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + +A + M +G+ P+ T +L A AL+ G+Q+ +
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S++ + +S+Y+K G + A +VF++ ++ + +WNA+I Q + A+
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F L K G +P+ T S+ + C S LEL VH + +K+ +SD + N+L+ M
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLI--MKAGLESDLHVSNALVSM 558
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ CG + A +F ++ + ++ SW ++I G+ +G A D F M+ESGI+P+ +TF
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-------MVDLLGRAGLLEEAR 381
G+L+AC + EG+ ++ A + C ++ + + G +E+A
Sbjct: 619 TGLLNACASPEALTEGRRLHALITE--------AAFDCDVLVGTGLISMYTKCGSIEDAH 670
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ +P K NV W ++ + G K
Sbjct: 671 QVFHKLP-KKNVYSWTSMITGYAQHGRGK 698
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 64/472 (13%)
Query: 39 AASSFLDTHE--DPAKIVATQLS-KCTNLLQLNQIYAHIIRTH----MLHSYSAAFHWNN 91
A SS + THE + +++ T S +C + ++A I T +L+ S A +N
Sbjct: 36 ACSSCVPTHEGIETLRMLTTSFSGRCPKGRCV--VFADIKDTQKANAVLNRLSKAGQFNE 93
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+++ R+++ I I+ T +L+ + L G ++++ + G
Sbjct: 94 AMQVLERVDSSH----IQIYRQ---------TYSALLQLCIKFKNLGDGERIYNHIKKSG 140
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
++ + F + I++Y+K G+ A+++FD+ E+ + SWN ++ G Q G +EA +
Sbjct: 141 VQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHE 200
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + +PD T VS+ +AC +++ +++ + +K+ +D + +LI+M+ K
Sbjct: 201 QMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI--LKAGWDTDLFVGTALINMHIK 258
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + A KVF + ++ +WTSMI G A +G +A + F M E G++P+ V FV +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 332 LSACVHGGKVQEGKHFFEMMKNV---------YQIEPRFAHYGCMVDLL-------GR-- 373
L AC H +++GK MK V I + G M D L GR
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 374 -------AGLLEEAR---------AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
AG + R M+E ++ N V + ++GAC +K G+ +
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIES-GIEPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 418 HLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKHRNL----AKIPAY 464
H+ E SD L ++YA G ++ R+ + +N+ A I AY
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 242/407 (59%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L ++++ I + +++ WN +I Y + E AL + + + G+
Sbjct: 459 AKCGSLKDAHRVFEKISKQNVVA-------WNAMITAYVQHEQYDNALATFQALLKEGIK 511
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T +L +LE+G+ +H L ++ GLES+ + +S++ GD A+ +
Sbjct: 512 PNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNL 571
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ P+R L SWN IIAG Q G+ + A D F +++ G +PD +T + +AC S L
Sbjct: 572 FNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEAL 631
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++H + ++ D L+ LI MY KCG ++ A++VF ++ + NV SWTSMI
Sbjct: 632 TEGRRLHALI--TEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIA 689
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA +G EAL+ F+ M++ G++P+ +TFVG LSAC H G ++EG H F+ MK + IE
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIE 748
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGCMVDL GRAGLL EA + M ++ + +WG L+GAC+ NV++ E A+
Sbjct: 749 PRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQK 808
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL+P +G +V+LSNIYA+ G+W+EV ++R VM R + K P S
Sbjct: 809 KLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 183/345 (53%), Gaps = 13/345 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N + QI+ + + + WN ++ Y + ++A ++ M + V
Sbjct: 156 AKCGNTISAKQIFDDMREKDV-------YSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVK 208
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T +L A ++ GR+L++L ++ G +++ F + I+++ K GD A KV
Sbjct: 209 PDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKV 268
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD P R L +W ++I GL++ GR K+A ++F +++ G +PD V VS+ AC L
Sbjct: 269 FDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEAL 328
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E +VH + +V ++ + +++ MY KCG M+ A +VF + NV SWT+MI
Sbjct: 329 EQGKKVHARMKEV--GWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQI 357
G+A +G +EA F+ M ESGI PN VTF+ +L AC ++ G+ + +++ Y
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ R ++ + + G L++A + E + K NVV W ++ A
Sbjct: 447 DDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITA 488
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 161/329 (48%), Gaps = 18/329 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + +A + M +G+ P+ T +L A AL+ G+Q+ +
Sbjct: 381 WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHII 440
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S++ + +S+Y+K G + A +VF++ ++ + +WNA+I Q + A+
Sbjct: 441 EAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALA 500
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F L K G +P+ T S+ + C S LEL VH + +K+ +SD + N+L+ M
Sbjct: 501 TFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLI--MKAGLESDLHVSNALVSM 558
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ CG + A +F ++ + ++ SW ++I G+ +G A D F M+ESGI+P+ +TF
Sbjct: 559 FVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITF 618
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-------MVDLLGRAGLLEEAR 381
G+L+AC + EG+ ++ A + C ++ + + G +E+A
Sbjct: 619 TGLLNACASPEALTEGRRLHALITE--------AAFDCDVLVGTGLISMYTKCGSIEDAH 670
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ +P K NV W ++ + G K
Sbjct: 671 QVFHKLP-KKNVYSWTSMIAGYAQHGRGK 698
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 218/472 (46%), Gaps = 64/472 (13%)
Query: 39 AASSFLDTHE--DPAKIVATQLS-KCTNLLQLNQIYAHIIRTH----MLHSYSAAFHWNN 91
A SS + THE + +++ T S +C + ++A I T +L+ S A +N
Sbjct: 36 ACSSCVPTHEGIETLRMLTTSFSGRCPKGRCV--VFADIKDTQKANAVLNRLSKAGQFNE 93
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+++ R+++ I I+ T +L+ + L G ++++ + G
Sbjct: 94 AMQVLERVDSSH----IQIYRQ---------TYSALLQLCIKFKNLGDGERIYNHIKKSG 140
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
++ + F + I++Y+K G+ A+++FD+ E+ + SWN ++ G Q G +EA +
Sbjct: 141 VQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHE 200
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + +PD T VS+ +AC +++ +++ + +K+ +D + +LI+M+ K
Sbjct: 201 QMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLI--LKAGWDTDLFVGTALINMHIK 258
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + A KVF + ++ +WTSMI G A +G +A + F M E G++P+ V FV +
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 332 LSACVHGGKVQEGKHFFEMMKNV---------YQIEPRFAHYGCMVDLL-------GR-- 373
L AC H +++GK MK V I + G M D L GR
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 374 -------AGLLEEAR---------AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
AG + R M+E ++ N V + ++GAC +K G+ +
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIES-GIEPNRVTFMSILGACSSPSALKRGQQIQD 437
Query: 418 HLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKHRNL----AKIPAY 464
H+ E SD L ++YA G ++ R+ + +N+ A I AY
Sbjct: 438 HIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 261/470 (55%), Gaps = 63/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML----------------HSYSAA--------------F 87
L +C+N+ +L QI+ +++T ++ +S S A F
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR Y+ + P++AL +Y M V + YT P +LKA + A E +Q+H+
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHI 144
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-------------------------- 181
+++G S + + +++YSK+GD + AR +FD+
Sbjct: 145 IKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAY 204
Query: 182 -----NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
PER + SW ++I+G G+ KEA+++F ++ G + D+V +VS AC LG
Sbjct: 205 EIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLG 264
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ +H Y+ K + + D ++ LIDMY KCG ++ A +VF ++++ VS WT+M
Sbjct: 265 VLDQGKWIHAYI--KKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA +G EAL+ F M+ +G+ PN +TF G+L+AC H G V E K FE M+ ++
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+P HYGCMVDLLGRAGLL+EA ++E MP+K N IWG L+ AC GN+++G+ +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
K L +++P G Y+ L++I+A+ G W + R+R MK + ++K+P S+
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSV 492
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 228/386 (59%), Gaps = 4/386 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
AF +N +IR + + P+KA D Y M G++ D +T +LK QL + +GR +H
Sbjct: 53 AFIFNTMIRGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMHC 112
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ GL S+ F + + +Y D E +R++F+E P +L +WN II G+ E
Sbjct: 113 STLKRGLNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNE 172
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A++MF + K G EPD+ T V + SAC +LG L+ VH + + T + NSL
Sbjct: 173 ALEMFSRMLKFGIEPDEATFVVILSACSALGALDFGRWVHSCISNIG--HGCITEVNNSL 230
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI-RPN 324
+DMY KCG + A+++F +++ N +W +MI+G A++G ANEAL F M E + P+
Sbjct: 231 LDMYAKCGALQEAFEIFNGMNKKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPD 290
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+ VLSAC HGG V +G FF++MK Y I+P HYGCMVD+LGRAG +EEA ++
Sbjct: 291 DITFLVVLSACSHGGMVDKGWRFFDIMKKEYHIQPTIKHYGCMVDILGRAGFVEEAYRLI 350
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MPM+ N ++W L+ AC GNV++G+ V K L ELEP YV+L+N YAS G W
Sbjct: 351 SNMPMQCNAIVWRTLLAACRLHGNVELGKQVRKQLLELEPDHSSDYVLLANTYASAGRWN 410
Query: 445 EVERIRAVMKHRNLAKI-PAYSLATR 469
E R+R M R + K P S+ R
Sbjct: 411 EAMRVRKTMHKRGVQKPEPGNSVVGR 436
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 149/325 (45%), Gaps = 22/325 (6%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKA--GDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+H+ ++LG E N F I + A GD A VF++ + +N +I G
Sbjct: 5 KQIHARVIQLGFEQNRFVVGKVIVFCAAAEHGDMNYAVSVFEKIGDPDAFIFNTMIRGFG 64
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ ++A D + +++ G D T + CG LG + L +H +K S
Sbjct: 65 KANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCGQLGLVLLGRLMH--CSTLKRGLNSH 122
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ N+L+ MYG ++ + ++F EI P + +W +I + + G NEAL+ F M +
Sbjct: 123 VFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLK 182
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-------MVDLL 371
GI P+ TFV +LSAC G + G+ + N+ +GC ++D+
Sbjct: 183 FGIEPDEATFVVILSACSALGALDFGRWVHSCISNI--------GHGCITEVNNSLLDMY 234
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS--DGA 429
+ G L+EA + GM K N V W ++ G + ++ E + W+ D
Sbjct: 235 AKCGALQEAFEIFNGMN-KKNTVTWNTMILGLASHGYANEALALFSNMLEQKLWAPDDIT 293
Query: 430 YVVLSNIYASRGLWEEVERIRAVMK 454
++V+ + + G+ ++ R +MK
Sbjct: 294 FLVVLSACSHGGMVDKGWRFFDIMK 318
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 241/420 (57%), Gaps = 49/420 (11%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +IR + P AL ++I M V P+C+T P V KA + L GRQ+H
Sbjct: 54 FSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHG 113
Query: 146 LAVRLGLESNEFCESGFISLY--------------------------------------- 166
LAV+ GL+S+EF S + +Y
Sbjct: 114 LAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLW 173
Query: 167 -------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ G+ E AR +FDE P+R + SWN +IAG +Q G KEA+++F ++
Sbjct: 174 NVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVP 233
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ VT+VSV A LG LEL VH Y V++ D ++ ++LIDMY KCG ++ A
Sbjct: 234 PNYVTLVSVLPAMSRLGALELGKWVHLYA--VRNNIGVDDVLGSALIDMYAKCGSIEKAL 291
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF + + NV +W+++I G A +G A + LD F M +G+ P+ VT++G+LSAC H G
Sbjct: 292 QVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAG 351
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V EG+ FF+ M V +EPR HYGCMVDLLGRAGLLEE+ ++ MP+K + VIW L
Sbjct: 352 LVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKAL 411
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+GAC+ GNV+MG+ VA+HL EL P G+YV LSNIYAS G WE V ++R +MK +++
Sbjct: 412 LGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVS 471
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 153/358 (42%), Gaps = 60/358 (16%)
Query: 141 RQLHSLAVRLGLESNEFCESGFI--SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+QLH+ ++ + + + S S D + ARK+F S+N +I LS
Sbjct: 5 KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 64
Query: 199 QDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVH------------ 245
+ +A+ +FI + + C EP+ T SV ACG L QVH
Sbjct: 65 ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 124
Query: 246 ------------------------KYVF--------QVKSKQKSDTLMLNSLIDMYGKCG 273
+ VF K + D ++ N +ID Y + G
Sbjct: 125 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIG 184
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
+++A +F E+ Q +V SW MI GYA +G EA++ F M+ + + PN+VT V VL
Sbjct: 185 ELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLP 244
Query: 334 ACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
A G ++ GK H + + N+ ++ ++D+ + G +E+A + EG+P K
Sbjct: 245 AMSRLGALELGKWVHLYAVRNNI-GVDDVLG--SALIDMYAKCGSIEKALQVFEGLP-KR 300
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW----SDGAYVVLSNIYASRGLWEE 445
NVV W ++ G K H +++E SD Y+ L + + GL E
Sbjct: 301 NVVTWSTIIAGLAMHGRAKD---TLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNE 355
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 235/379 (62%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + P +AL +Y M G PD T+ ++ A +L L +G +LHS
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ S +++Y+K GD + AR+VFD+ ++ + +W+A+I G ++ R+ EA+
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 209 MFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-SLI 266
+F + P++VT+++V SAC LGDLE VH Y+ + QK ++ LN SLI
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT---QKGHSVSLNNSLI 324
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG +D A ++F + ++ SW SM+ G+A +GL EAL F M+ + ++P+ +
Sbjct: 325 DMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEI 384
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVL+AC H G VQEGK F ++ +Y + + HYGCMVDLL RAGLL EAR +
Sbjct: 385 TFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRV 444
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG ++GAC + N+++GE A+ L +LEP +DG Y++LSNIYA R +W EV
Sbjct: 445 MPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEV 504
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+++R +M + + K P S
Sbjct: 505 KKVRELMNEKGIQKTPGCS 523
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 197/373 (52%), Gaps = 19/373 (5%)
Query: 67 LNQIYAHIIRTHML---HSYSAAFH--------WNNIIRLYTRLEAPKKALDIYIFM-SR 114
LN++ AH++ L ++YS H WN+++R + P++AL Y M R
Sbjct: 13 LNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLER 72
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
+ +PD +T P +LK L ++G+ LH V+ L S+ + E+ +++Y+ GD +
Sbjct: 73 SRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKS 132
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR +F+ R W ++I+G ++ EA+ ++ +++ GF PD+VTM ++ SAC
Sbjct: 133 ARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAE 192
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L DL + +++H ++ ++ K ++ ++L++MY KCG + A +VF ++ +V +W+
Sbjct: 193 LKDLGVGMKLHSHIREM--DMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250
Query: 295 SMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I GY N + EAL F + S +RPN VT + V+SAC G ++ G+ + +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG--ACEKFGNVKM 411
Q + ++D+ + G ++ A+ + + M K +++ W ++ A G +
Sbjct: 311 T-QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYK-DLISWNSMVNGFALHGLGREAL 368
Query: 412 GEWVAKHLQELEP 424
++ +L+P
Sbjct: 369 AQFRLMQTTDLQP 381
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 230/377 (61%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL++Y M + V PD T+ V+ A Q ++E+GRQLHS
Sbjct: 165 WNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIE 224
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A +F ++ + SWN +I G + KEA+
Sbjct: 225 DHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALL 284
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+SV AC LG +++ +H Y+ + + + +L SLIDM
Sbjct: 285 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDM 344
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + ++SSW +MI G+A +G AN A D F MR++GI P+ +TF
Sbjct: 345 YAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 404
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y+I P+ HYGCM+DLLG GL +EA+ M+ MP
Sbjct: 405 VGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP 464
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ NV++GE A++L ++EP + G+YV+LSNIYA+ G W++V +
Sbjct: 465 MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAK 524
Query: 449 IRAVMKHRNLAKIPAYS 465
IR ++ + + K P S
Sbjct: 525 IRTLLNDKGIKKAPGCS 541
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 174/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + AL +Y+ M G+LP+ Y+ P +LK+ + AL G+Q+H +
Sbjct: 33 WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDE----------------------NPERK 186
+LG + + + + IS+Y++ G E A KVFD N RK
Sbjct: 93 KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152
Query: 187 LG---------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
L SWNA+I+G + KEA++++ + K +PD+ TMV+V SAC G
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL Q+H ++ S+ ++N LID+Y KCG ++ A +F + + +V SW ++I
Sbjct: 213 IELGRQLHSWI--EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLI 270
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
G+ L EAL F M SG PN VT + VL AC H G + G+ H + + K +
Sbjct: 271 GGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY-INKRLK 329
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A+ + + M ++ N +I+G M
Sbjct: 330 GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 35/259 (13%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A +F+ E L WN + G + + + A+ +++ + G P+ + + +C
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L Q+H +V ++ D + SLI MY + GR++ A+KVF +V S+T
Sbjct: 78 SKALIEGQQIHGHVLKLGYDL--DMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYT 135
Query: 295 SMIVGYAANGLAN-------------------------------EALDCFHYMRESGIRP 323
++I GYA+ G N EAL+ + M ++ ++P
Sbjct: 136 ALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKP 195
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ T V V+SAC G ++ G+ +++ + ++DL + G +E A +
Sbjct: 196 DESTMVTVVSACAQSGSIELGRQLHSWIED-HGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 384 VEGMPMKANVVIWGCLMGA 402
+G+ K +V+ W L+G
Sbjct: 255 FQGLA-KKDVISWNTLIGG 272
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A +F I +PN+ W +M G+A N + AL + M G+ PN +F +L +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 335 CVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
C + EG+ ++K Y ++ ++ + + G LE+A + +
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVN--TSLISMYAQNGRLEDAHKVFD 124
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 230/377 (61%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+HS
Sbjct: 191 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWID 250
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A +F+ P + + SWN +I G + KEA+
Sbjct: 251 DHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALL 310
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 311 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDM 370
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF I ++SSW +MI G+A +G A+ + D F MR++GI P+ +TF
Sbjct: 371 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITF 430
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y++ P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 431 VGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME 490
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYA+ G W EV
Sbjct: 491 MEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVAN 550
Query: 449 IRAVMKHRNLAKIPAYS 465
RA++ + + K+P S
Sbjct: 551 TRALLNDKGMKKVPGCS 567
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P +LK+ + A + G+Q+H +
Sbjct: 59 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 118
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER----------------------- 185
+LG + + + + IS+Y + G E A KVFDE+P R
Sbjct: 119 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQK 178
Query: 186 --------KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 179 MFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 238
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 239 IELGRQVHSWIDD--HGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLI 296
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 297 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLK 355
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + + K+ N +I+G M
Sbjct: 356 GVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 404
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 147/314 (46%), Gaps = 44/314 (14%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 286 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 345
Query: 143 LHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H + RL G+ + + I +Y+K GD E A +VF+ + L SWNA+I G +
Sbjct: 346 IHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 405
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
GRA + D+F ++K G EPDD+T V + SAC G L+L +++F+
Sbjct: 406 GRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG----RHIFR---------- 451
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
M YK+ P + + MI +GL EA + + M
Sbjct: 452 -------------SMTQDYKM-----TPKLEHYGCMIDLLGHSGLFKEAEEMINTME--- 490
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEE 379
+ P+ V + +L AC G V+ G+ F +N+ +IEP Y + ++ AG E
Sbjct: 491 MEPDGVIWCSLLKACKMHGNVELGESF---AQNLIKIEPENPGSYVLLSNIYATAGRWNE 547
Query: 380 ---ARAMVEGMPMK 390
RA++ MK
Sbjct: 548 VANTRALLNDKGMK 561
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 38/296 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S I + F+ A VF+ E L WN + G
Sbjct: 7 RMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 66
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T + +C + Q+H +V ++
Sbjct: 67 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDL-- 124
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY + GR++ A+KV F EI
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC G ++ G+
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 244
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G LE A + EG+P K +V+ W L+G
Sbjct: 245 VHSWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGG 298
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 61/163 (37%), Gaps = 31/163 (19%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN+ W +M G+A + AL + M G+ PN TF +L +C
Sbjct: 44 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 103
Query: 338 GGKVQEGKHF----------------------------FEMMKNVYQIEPR--FAHYGCM 367
+EG+ E V+ P Y +
Sbjct: 104 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTAL 163
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ G +E A+ M + +P+K +VV W ++ + GN K
Sbjct: 164 IKGYASRGYIENAQKMFDEIPVK-DVVSWNAMISGYAETGNYK 205
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 223/377 (59%), Gaps = 8/377 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+ + KAL I M R GV P+ +T VL+A L L RQLH +
Sbjct: 124 WTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGII 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F S I +YSK D + A VFDE P R L WN+II G +Q+ EA++
Sbjct: 180 KTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALN 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF D T+ SV AC L LEL QVH +V K D ++ N+LIDM
Sbjct: 240 LFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVL----KFDQDLILNNALIDM 295
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A F + + +V SW++M+ G A NG + +AL+ F M+ESG RPN++T
Sbjct: 296 YCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITV 355
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL AC H G V++G ++F MK ++ ++P HYGC++DLLGRAG L+EA ++ M
Sbjct: 356 LGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEME 415
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+GAC NV + + AK + ELEP G Y++LSNIYA+ WE+V
Sbjct: 416 CEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAE 475
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M +R + K P S
Sbjct: 476 VRKTMTNRGIRKTPGCS 492
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 10/296 (3%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R GV D T ++K A++ G+++H G E F + +++Y K
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
E+A +FDE PER + SW +I+ S K A+ I + + G P+ T SV A
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSNKLNDK-ALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C L +L Q+H + +K+ +SD + ++LID+Y K +D A VF E+ ++
Sbjct: 165 CDGLPNLR---QLHCGI--IKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLV 219
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
W S+I G+A N NEAL+ F M+ +G + T VL AC ++ G+ ++
Sbjct: 220 VWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGR---QVH 276
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+V + + ++D+ + G LE+A + M ++ +V+ W ++ + G
Sbjct: 277 VHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVISWSTMVAGLAQNG 331
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
+ A+ M G+ + +T+ ++ C G VQEGK E + EP+
Sbjct: 37 HRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHI-FCKGYEPKMFVVNT 95
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++++ + LLEEA + + MP + NVV W ++ A
Sbjct: 96 LLNMYVKFNLLEEAEDLFDEMPER-NVVSWTTMISA 130
>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
Length = 581
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 229/379 (60%), Gaps = 3/379 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y R P KAL + M + V D TL L AS + +++GR HSL V
Sbjct: 164 WNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVV 223
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G N + S IS+Y+K G E ARKVF ER + W ++I+G +Q G+ KEA++
Sbjct: 224 VNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVN 283
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G + DD T+ +V S+C +G L+L VH Y V K ++ NSLIDM
Sbjct: 284 LFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYC-DVHGLGKELSVK-NSLIDM 341
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG ++ A+++F + + +V SWT+MI+G+ NGL +EALD F M G + PN VT
Sbjct: 342 YSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEVT 401
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVL++C HGG V++G H+F+ M VY++ PR HYGCMVDLLGRA LL EA ++ M
Sbjct: 402 FLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQFIKNM 461
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ +VV+W L+ AC G V + E+VA+ + ELEP +V+LSN+YA+ W +V
Sbjct: 462 PIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATTSRWVDVN 521
Query: 448 RIRAVMKHRNLAKIPAYSL 466
+R M + ++K P S
Sbjct: 522 ELRTSMDNSRMSKQPGCSF 540
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 146/283 (51%), Gaps = 6/283 (2%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D Y+L I A+ +L ++ +G QLHSL+V+LGL S+ F + I++YS AR+V
Sbjct: 92 DNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQVL 151
Query: 180 DENPERKLG--SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
D P+ SWN II+G + G +A+ F + K DDVT+++ A G
Sbjct: 152 DSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGK 211
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+++ H V V + + M +SLI MY KCG ++ A KVF + + NV WTSMI
Sbjct: 212 VKVGRLCHSLV--VVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMI 269
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY G EA++ F M+ +G++ + T V+S+C G + G+ + +V+ +
Sbjct: 270 SGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGR-YVHAYCDVHGL 328
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ ++D+ + G + +A + G+ K +V W ++
Sbjct: 329 GKELSVKNSLIDMYSKCGDINKAHEIFCGLT-KRDVFSWTAMI 370
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 242/468 (51%), Gaps = 65/468 (13%)
Query: 62 TNLLQLNQIYAHIIRTHMLHSYSAA-------------------------------FHWN 90
T++ +L+Q +AHI+++ ++HS AA + WN
Sbjct: 18 TSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWN 77
Query: 91 NIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
IIR Y P+ AL I+ M A VLPD YT LK+ +E GRQ+H ++
Sbjct: 78 TIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKT 137
Query: 151 GLESNEFCESGFISLYSKAGDFEKAR--------------------------------KV 178
GL + F ++ I LY+ G E AR +V
Sbjct: 138 GLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRV 197
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F E P + + SWNA+I G S GR E + +F ++ G +PD+ T+VSV SAC +G L
Sbjct: 198 FGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGAL 257
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
VH Y+ K+ D + +L+DMY KCG ++ A +VF + ++S+W S+I
Sbjct: 258 SQGEWVHAYI--DKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIIS 315
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G + +G AL F M G +PN VTFV VLSAC G + EG+ F +M +V+ I+
Sbjct: 316 GLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQ 375
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYGCMVDLLGR GLLEEA +V+ MP K V+W L+GAC GNV++ E VA+
Sbjct: 376 PTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQK 435
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL P ++V LSN+YAS G W++V +R M+ + + K P S+
Sbjct: 436 LLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSM 483
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 237/399 (59%), Gaps = 5/399 (1%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLK 129
YAH + + + + F WN +IR Y + A+ +Y M +G V PD +T P +LK
Sbjct: 71 YAHKVFSKIEKPINV-FIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLK 129
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
A ++ + +G +HS+ +R G S + ++ + LY+ GD A KVFD+ PE+ L +
Sbjct: 130 AVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WN++I G +++G+ +EA+ ++ + G +PD T+VS+ SAC +G L L + H Y+
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMI 249
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+V + + N L+D+Y +CGR++ A +F E+ N SWTS+IVG A NGL EA
Sbjct: 250 KVGLTRNLHSS--NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEA 307
Query: 310 LDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
++ F M + G+ P +TFVG+L AC H G V+EG +F M Y+IEPR H+GCMV
Sbjct: 308 IELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMV 367
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLL RAG +++A + MPM+ NVVIW L+GAC G+ + E + +LEP G
Sbjct: 368 DLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSG 427
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLA 467
YV+LSN+YAS W +V++IR M + K+P +SL
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLV 466
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 275 MDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVL 332
M A+KVF +I++P NV W ++I GYA G + A+ + MR SG + P+ T+ +L
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLL 128
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMP 388
A V+ G+ ++ I F ++ L G + A + + MP
Sbjct: 129 KAVGKMADVRLGETIHSVV-----IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 389 MKANVVIWGCLMGACEKFG 407
K ++V W ++ + G
Sbjct: 184 EK-DLVAWNSVINGFAENG 201
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 257/460 (55%), Gaps = 37/460 (8%)
Query: 38 SAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY-------------- 83
S SS+ +T P+ +++ L KCT+L +L QI A I+TH+ +
Sbjct: 15 SQHSSYYNTTY-PSSLLSC-LPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNP 72
Query: 84 -SAAFHW----------------NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI 126
+A+ + N++ R Y+R AP KA+ ++I +LPD YT P
Sbjct: 73 TTASMDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPS 132
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+LKA A + G+QLH LA++LGL N + I++Y+ D + A++VFDE E
Sbjct: 133 LLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPC 192
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ S+NAII G ++ R EA+ +F L+ +P+DVT++SV S+C LG L+L +H+
Sbjct: 193 VVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHE 252
Query: 247 YVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
YV K + +N+ LIDMY KCG +D A VF + + +W++MIV YA +G
Sbjct: 253 YV---KKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQ 309
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+ + F M + ++P+ +TF+G+L AC H G V EG +F M VY I P HYG
Sbjct: 310 GQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYG 369
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
CMVDLLGRAGLL EA ++ +P+K ++W L+ +C GN+++ + V + EL+
Sbjct: 370 CMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDDS 429
Query: 426 SDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G YV+LSN+ A G WE+V+ +R +M H+ KIP S
Sbjct: 430 HGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCS 469
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/427 (37%), Positives = 244/427 (57%), Gaps = 14/427 (3%)
Query: 44 LDTHEDPAKI--VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEA 101
L H DP + T S+C + +++ I R ++ WN++I Y +
Sbjct: 145 LALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS-------WNSMIAGYAKAGC 197
Query: 102 PKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCES 160
++A++++ M R G PD +L VL A +L LE+GR + V G+ N + S
Sbjct: 198 AREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGS 257
Query: 161 GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
IS+Y+K GD AR++FD R + +WNA+I+G +Q+G A EAI +F +K+
Sbjct: 258 ALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTE 317
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
+ +T+ +V SAC ++G L+L Q+ +Y Q + D + +LIDMY KCG + A +
Sbjct: 318 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQH--DIFVATALIDMYAKCGSLASAQR 375
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNHVTFVGVLSACVHG 338
VF E+ Q N +SW +MI A++G A EAL F M + G RPN +TFVG+LSACVH
Sbjct: 376 VFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHA 435
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V EG F+MM ++ + P+ HY CMVDLL RAG L EA ++E MP K + V G
Sbjct: 436 GLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGA 495
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+GAC NV +GE V + + E++P + G Y++ S IYA+ +WE+ R+R +M+ + +
Sbjct: 496 LLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGI 555
Query: 459 AKIPAYS 465
K P S
Sbjct: 556 TKTPGCS 562
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 158/286 (55%), Gaps = 14/286 (4%)
Query: 131 SC-QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
SC L L R HSL +L L S+ I++YS+ G ARKVFDE P R L S
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS 184
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
WN++IAG ++ G A+EA+++F + ++ GFEPD++++VSV ACG LGDLEL V +V
Sbjct: 185 WNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
V+ ++ + ++LI MY KCG + A ++F + +V +W ++I GYA NG+A+E
Sbjct: 245 --VERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADE 302
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----Y 364
A+ FH M+E + N +T VLSAC G + GK E Y + F H
Sbjct: 303 AISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDE-----YASQRGFQHDIFVA 357
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G L A+ + + MP K N W ++ A G K
Sbjct: 358 TALIDMYAKCGSLASAQRVFKEMPQK-NEASWNAMISALASHGKAK 402
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/309 (45%), Positives = 209/309 (67%), Gaps = 2/309 (0%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + + +Y K GD ARKVF E P + + SWN++I+GL+Q G+ KE++ MF +++
Sbjct: 241 FVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 300
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G +PDDVT+V+V ++C +LG LEL VH Y+ +++ ++D + N+L+DMY KCG +D
Sbjct: 301 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYL--DRNQIRADGFIGNALVDMYAKCGSID 358
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A VF +++ +V S+T+MIVG A +G +ALD F M + GI P+ VTFVGVL+AC
Sbjct: 359 QACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 418
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G V+EG+ +FE M +Y + P+ HYGCMVDLLGRAGL+ EA + MP++ + +
Sbjct: 419 HVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVL 478
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+GAC+ G V++GE V K ++++EP DGAYV++SNIY+S W + ++R MK R
Sbjct: 479 GALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKER 538
Query: 457 NLAKIPAYS 465
NL K P S
Sbjct: 539 NLEKTPGCS 547
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 38/272 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + K++L ++ M R GV PD TL VL + L LE+G+ +H+
Sbjct: 274 WNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLD 333
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + ++ F + + +Y+K G ++A VF + + S+ A+I GL+ G+ +A+D
Sbjct: 334 RNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALD 393
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G EPD+VT V V +AC +G +E + KY F+
Sbjct: 394 LFSEMPKMGIEPDEVTFVGVLTACSHVGLVE---EGRKY-FE------------------ 431
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
M Y + +P + + M+ GL NEA + ++R I P+
Sbjct: 432 -----DMSTIYNL-----RPQLEHYGCMVDLLGRAGLINEAEE---FIRNMPIEPDAFVL 478
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+L AC GKV+ G+ +MK + +IEPR
Sbjct: 479 GALLGACKIHGKVELGE---SVMKKIEKIEPR 507
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/378 (40%), Positives = 231/378 (61%), Gaps = 1/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y ++AL+++ M R V PD TL VL A Q ++E+GR++H+L
Sbjct: 183 WNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVD 242
Query: 149 -RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G S+ + FI LYSK GD E A +F+ + + SWN +I G + KEA+
Sbjct: 243 DHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEAL 302
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + G P+DVTM+SV AC LG +++ +H Y+ + + + + SLID
Sbjct: 303 LLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLID 362
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG ++ A++VF + ++SSW +MI G+A +G AN A D F MR++GI P+ +T
Sbjct: 363 MYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDIT 422
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VG+LSAC H G + G+H F+ + Y I P+ HYGCM+DLLG AGL +EA ++ M
Sbjct: 423 LVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMM 482
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ + VIW L+ AC+ GN+++ E A+ L E+EP + G+YV+LSNIYA+ G WE+V
Sbjct: 483 PMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVA 542
Query: 448 RIRAVMKHRNLAKIPAYS 465
RIR V+ + + K+P S
Sbjct: 543 RIREVLNGKGMKKVPGCS 560
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 168/349 (48%), Gaps = 39/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++R L++Y+ M G +P+ YT P +LK+ + E GRQ+H+ +
Sbjct: 51 WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
+LG E + + + IS+Y++ G E ARKVFD +
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
ER + SWNA+I G ++ +EA+++F + + PD+ T+VSV SAC G
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL ++H V S ++N+ I +Y KCG +++A +F + +V SW ++I
Sbjct: 231 IELGREIHTLV-DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLI 289
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + VL AC H G + G+ H + + K +
Sbjct: 290 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVY-IDKRLK 348
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ A ++D+ + G +E A + M K+ N +I+G M
Sbjct: 349 GVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAM 397
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 75/388 (19%)
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGLSQD 200
H+ V+ GL + + S + L + F+ A VF+ E L WN ++ GL+
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
++M++ + G P+ T + +C E Q+H V ++ + D
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCEL--DRY 119
Query: 261 MLNSLIDMYGKCGRMD-------------------------------LAYKVFWEIDQPN 289
SLI MY + GR++ A KVF I + +
Sbjct: 120 AHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERD 179
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW +MI GY N EAL+ F M + +RP+ T V VLSAC G ++ G+
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG-------- 401
++ + + + L + G +E A + EG+ K +VV W L+G
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGGYTHMNLY 298
Query: 402 ---------------------------ACEKFGNVKMGEWVAKHL-QELEPWSDGAYVVL 433
AC G + +G W+ ++ + L+ ++G+ +
Sbjct: 299 KEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRT 358
Query: 434 S--NIYASRGLWEEVERIRAVMKHRNLA 459
S ++YA G E ++ M H++L+
Sbjct: 359 SLIDMYAKCGDIEAAHQVFNSMMHKSLS 386
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 236/409 (57%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N I+ ++ +P A+ +Y + G+ PD Y++P VLKA +L A+E+GRQ+H+ V
Sbjct: 90 YNTAIKALSKTSSPINAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTV 149
Query: 149 RLGLESNEFCESGFISLYS-------------------------------KAGDFEKARK 177
L+ + + I +YS K G+ + ARK
Sbjct: 150 SSALDMDVNVATSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARK 209
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VF+E P+R + SW +IAG +Q R EAI++F ++ EPD++ M++V SAC LG
Sbjct: 210 VFNEMPQRNVISWTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGA 269
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL +H Y+ K + N+LIDMY K G + A +VF + Q +V +W+++I
Sbjct: 270 LELGEWIHNYI--EKHGLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVI 327
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +GL EA+D F M ++ +RPN VTFV +LSAC H G V G+++F+ M+++Y+I
Sbjct: 328 AALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKI 387
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP+ HYGCM+DLL RAG L+EA+ ++ MP +AN +IWG L+ A + ++ + K
Sbjct: 388 EPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALK 447
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL +LEP + G YV+LSN YA+ G W E +R +M++ + K P S+
Sbjct: 448 HLAKLEPGNSGNYVLLSNTYAALGKWNESGTVRKLMRNAGVKKAPGGSV 496
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 222/376 (59%), Gaps = 2/376 (0%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++IR YT ++ IY M + G+ PD T P VLK+ QL E+G+ +H ++
Sbjct: 111 NSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIHCCIIQ 170
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
+G ESN + + +++Y AR+VFDE P+R + SWNA+I G + + ++ ID+
Sbjct: 171 MGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDV 230
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F ++ G +P +VTMV V AC LG L + Y+ ++ + + + +LIDMY
Sbjct: 231 FREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDH--NRLRLNVFVGTALIDMY 288
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG +D A K+F + NV +W +I GYA NG AL F M +P+ VTF+
Sbjct: 289 AKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFL 348
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVL AC H G V EG+ +F MK + + PR HYGCMVDLLGRAG L+EA+ +++ M M
Sbjct: 349 GVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQLIQAMSM 408
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ + +IW L+GAC GN+++GE+ K L ELEP + YV+L+N+YA W++V +
Sbjct: 409 QPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQRWDKVGEV 468
Query: 450 RAVMKHRNLAKIPAYS 465
R +M R + K+P S
Sbjct: 469 REMMDCRRVRKVPGCS 484
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y +K +D++ M AG P T+ VL A L AL GR +
Sbjct: 211 WNALITGYNHNRMFRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYID 270
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L N F + I +Y+K G ++A K+F + + +WN +I+G + +GR + A+
Sbjct: 271 HNRLRLNVFVGTALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLISGYAMNGRGESALQ 330
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK--QKSDTLMLNSLI 266
F + F+PD+VT + V AC G L + Y +K + + ++
Sbjct: 331 AFSRMIMEKFKPDEVTFLGVLCACCHQG---LVNEGRTYFTSMKEEFGLRPRIEHYGCMV 387
Query: 267 DMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
D+ G+ G +D A ++ + QP+ W ++
Sbjct: 388 DLLGRAGFLDEAQQLIQAMSMQPDPIIWRELL 419
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 242/423 (57%), Gaps = 37/423 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVL 128
YA+++ T + H F WN IIR ++R P+ A+ I+I M S V P T P V
Sbjct: 76 YAYLVFTRINHK--NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY---------------------- 166
KA +L GRQLH + ++ GLE + F + + +Y
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 167 ---------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
+K G ++A+ +FDE P+R SWN++I+G ++GR K+A+DMF +++
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
+PD TMVS+ +AC LG E +H+Y+ V+++ + +++++ +LIDMY KCG ++
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYI--VRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
VF + +S W SMI+G A NG A+D F + SG+ P+ V+F+GVL+AC H
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G+V FF +MK Y IEP HY MV++LG AGLLEEA A+++ MP++ + VIW
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ AC K GNV+M + AK L++L+P YV+LSN YAS GL+EE R +MK R
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 458 LAK 460
+ K
Sbjct: 492 MEK 494
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLY-SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+Q+H+ ++ GL S+ S ++ + D A VF + WN II G S+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 200 DGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ AI +FI + +P +T SV A G LG Q+H V +K +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV--IKEGLED 159
Query: 258 DTLMLNSLIDMY-------------------------------GKCGRMDLAYKVFWEID 286
D+ + N+++ MY KCG +D A +F E+
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
Q N SW SMI G+ NG +ALD F M+E ++P+ T V +L+AC + G ++G+
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 347 FFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
E +++N +++ ++D+ + G +EE + E P K
Sbjct: 280 IHEYIVRNRFELNSIVVT--ALIDMYCKCGCIEEGLNVFECAPKK 322
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/450 (35%), Positives = 257/450 (57%), Gaps = 36/450 (8%)
Query: 48 EDPAKIVATQLSKCTNLLQLNQIYAHIIRTH----------------------MLHSY-- 83
E P+ + + + KCT+L +L QI A+ I+TH M H++
Sbjct: 32 EPPSSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRM 91
Query: 84 ------SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFAL 137
+N + R Y R + P +A+ + + +G+LPD YT +LKA +L AL
Sbjct: 92 FDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKAL 151
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
E G+QLH LAV+LG+ N + I++Y+ D + AR+VFD+ E + ++NAII
Sbjct: 152 EEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSC 211
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ-- 255
+++ R EA+ +F L++ G +P DVTM+ S+C LG L+L +H+YV + Q
Sbjct: 212 ARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYV 271
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
K +T +LIDMY KCG +D A VF ++ + + +W++MIV YA +G ++A+
Sbjct: 272 KVNT----ALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLRE 327
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M+++ ++P+ +TF+G+L AC H G V+EG +F M + Y I P HYGCM+DLLGRAG
Sbjct: 328 MKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAG 387
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LEEA ++ +P+K ++W L+ +C GNV+M + V + + EL+ G YV+LSN
Sbjct: 388 RLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSHGGDYVILSN 447
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ A G W++V +R +M + K+P S
Sbjct: 448 LCARNGRWDDVNHLRKMMVDKGALKVPGCS 477
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 251/443 (56%), Gaps = 43/443 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC N+ Q++ + +++ WN++I Y + +AL ++ M + V
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVS-------WNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARK 177
PD TL V+ A L A+++G+++H+ V++ L ++ + F+ +Y+K ++AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 178 VFDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEA 206
+FD P ER + SWNA+IAG +Q+G +EA
Sbjct: 311 IFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLML 262
+ +F LK+ P T ++ AC L DL L +Q H +V F+ +S ++ D +
Sbjct: 371 LSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
NSLIDMY KCG ++ Y VF ++ + + SW +MI+G+A NG NEAL+ F M +SG +
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEK 490
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+T +GVLSAC H G V+EG+H+F M + + P HY CMVDLLGRAG LEEA++
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++E MP++ + VIWG L+ AC+ N+ +G++VA+ L E+E + G YV+LSN+YA G
Sbjct: 551 IIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGK 610
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W + +R +M+ + K P S
Sbjct: 611 WGDAMNVRKLMRKEGVTKQPGCS 633
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 44/351 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + + ++AL + M + G + + YT L A L + G Q+HSL
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ + S + +YSK G+ A++VFDE +R + SWN++I Q+G A EA+
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + EPD+VT+ SV SAC SL +++ +VH V ++ K ++D ++ N+ +DM
Sbjct: 240 VFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKM-DKLRNDIILSNAFVDM 298
Query: 269 YGKCGRMDLAYKV-------------------------------FWEIDQPNVSSWTSMI 297
Y KC R+ A + F ++ + NV SW ++I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG--------KHFFE 349
GY NG EAL F ++ + P H TF +L AC + G KH F+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFK 418
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G +EE + M M+ + V W ++
Sbjct: 419 FQSGE---EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 158/321 (49%), Gaps = 40/321 (12%)
Query: 110 IFMSRAGVLPD-CYTLPIV-LKASC---QLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
IF+ AG L + P L SC +L A+++ R +H+ ++ G + F ++ I
Sbjct: 5 IFLKLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDV-RCVHASVIKSGFSNEVFIQNRLID 63
Query: 165 LYSKAGDFEKARKVFDENPER-------------KLG------------------SWNAI 193
Y+K G E R++FD+ P+R KLG +WN++
Sbjct: 64 AYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSM 123
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
++G +Q R +EA+ F + K GF ++ T S SAC L D+ +Q+H + KS
Sbjct: 124 VSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLI--AKS 181
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
SD + ++L+DMY KCG ++ A +VF E+ NV SW S+I Y NG A EAL F
Sbjct: 182 PCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVF 241
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M ES + P+ VT V+SAC ++ G+ + + ++ VD+ +
Sbjct: 242 QVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAK 301
Query: 374 AGLLEEARAMVEGMPMKANVV 394
++EAR + + MP++ NV+
Sbjct: 302 CSRIKEARFIFDSMPIR-NVI 321
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 262/494 (53%), Gaps = 47/494 (9%)
Query: 10 LSSLRMKSSHP---LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVAT-QLSKCTNLL 65
+S+LR + HP L+ ++ T + L+ E + VA+ + TNLL
Sbjct: 1 MSTLRNIAKHPTIALIDSFITLKELKQIHTQLVINGLLNNRELLGQFVASIAVRNPTNLL 60
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYT 123
NQI + + F N++IR Y++ P K+ Y I S + PD YT
Sbjct: 61 YSNQILDQCAKPTL-------FALNSMIRAYSKSLTPHKSFQFYNKILQSNDVMSPDNYT 113
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS---------------- 167
+++ +C A E G +H ++ G E + ESG I +Y+
Sbjct: 114 FNFLVR-TCAQSACEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRVFESVQ 172
Query: 168 ---------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
K GD AR +FD P+R SWNA+IAG +Q G+++EA+++F
Sbjct: 173 KPDLVCQTTMVSACAKCGDIGFARNLFDSMPQRDFVSWNAMIAGYAQRGQSREALNLFKL 232
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
++ G + ++V+M+SV +AC LG L+ H Y+ K+K + + +L+DMY KC
Sbjct: 233 MQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYI--EKNKIQMTVNLGTALVDMYFKC 290
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G +D A KVFWE+++ NV +W++ I G A NG + L+ F +M+ GI PN +TF+ VL
Sbjct: 291 GNVDRALKVFWEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIAPNEITFISVL 350
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
C G V EG+ F+ MK + IEPR HYGCMVDL GRAG LEEA + MP+K +
Sbjct: 351 KGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALNFINTMPLKPH 410
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
WG L+ AC + N+++GE+ ++ L E+E + GAYV LSNIYA G W+ V +R
Sbjct: 411 AGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGNWDRVSNVRQS 470
Query: 453 MKHRNLAKIPAYSL 466
MK ++K+P S+
Sbjct: 471 MKAEGISKLPGCSV 484
>gi|147810456|emb|CAN69807.1| hypothetical protein VITISV_019655 [Vitis vinifera]
Length = 516
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/457 (35%), Positives = 254/457 (55%), Gaps = 37/457 (8%)
Query: 35 VTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY----------- 83
T+S F D+ E+ V + +C ++ L Q++AH+I+T + +
Sbjct: 39 TTLSENEGF-DSREER---VMSVFKQCESMKHLEQLHAHVIQTGLEQNLFVMGKIIVFCA 94
Query: 84 -------------------SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
F WN +IR R P+KA + Y M G + D +T
Sbjct: 95 VSECGSMDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTY 154
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
++K QL + +G+Q+H ++ GLE + F + + +Y D E A +F+E P+
Sbjct: 155 SFLVKVCGQLGSDLLGKQIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPK 214
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
L +WN II GR KEAI++F + + G +PDD T V SAC +LG+L++ +V
Sbjct: 215 SYLVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRV 274
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + + + + NSLIDMY KCG ++ AY++F ++ N+ SW +MI+G A +G
Sbjct: 275 HSCIDH--TGLGNVVSVSNSLIDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHG 332
Query: 305 LANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
+EAL+ F M E + PN VTF+GVL AC HGG V+EG+ +F++M+ Y I+P H
Sbjct: 333 HGDEALELFSKMLEEKLATPNEVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKH 392
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YG MVD+LGRAGL+EEA +++ MP+++N ++W L+ AC GN+++ E V + L ELE
Sbjct: 393 YGSMVDILGRAGLVEEAYRLIKSMPIESNSIVWRTLLAACRVHGNLELAEQVRQXLLELE 452
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
P YV+L+N+YAS G W +V R+R M R + K
Sbjct: 453 PDHSSDYVLLANMYASAGQWNKVXRVRKSMHIRGVQK 489
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 10/252 (3%)
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
GF+ + ++SV C S+ LE Q+H +V Q +Q + + +CG MD
Sbjct: 46 GFDSREERVMSVFKQCESMKHLE---QLHAHVIQTGLEQNLFVMGKIIVFCAVSECGSMD 102
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +VF +I+ P+ W +MI G +A + + M+ G ++ T+ ++ C
Sbjct: 103 YALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCG 162
Query: 337 HGGKVQEGKHFFEMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
G GK ++ NV + +E +V + G +E A + E MP K+ +V
Sbjct: 163 QLGSDLLGK---QIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMP-KSYLV 218
Query: 395 IWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
W ++ G K E + LQ D +VV + A+ G + R+ + +
Sbjct: 219 AWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCI 278
Query: 454 KHRNLAKIPAYS 465
H L + + S
Sbjct: 279 DHTGLGNVVSVS 290
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 249/441 (56%), Gaps = 37/441 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSA-------------------AFH---------- 88
L KCT+L +L Q+ A I+TH+ S A H
Sbjct: 27 LPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDI 86
Query: 89 --WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+N + R Y R + P +A ++ + +G+ PD YT P +LKA ALE GRQLH L
Sbjct: 87 VLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCL 146
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A++LGL N + I++Y+ + + AR+VFD+ E + ++NA+I G ++ R EA
Sbjct: 147 AIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEA 206
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ--KSDTLMLNS 264
+ +F L+ +P DVTM+SV S+C LG L+L +H+YV + + K DT +
Sbjct: 207 LSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDT----A 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG +D A VF + + +W++MI+ YA +G +A+ F MR++G P+
Sbjct: 263 LIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPD 322
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+G+L AC H G V+EG +F M++ Y + P HYGCMVDLLGRAG LEEA +
Sbjct: 323 EITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFI 382
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
G+P++ ++W L+ AC GNV++G+ V + + EL+ G Y++LSN+ A G WE
Sbjct: 383 VGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWE 442
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
+V +R +M R + KIP S
Sbjct: 443 DVNYVRKLMNERGVVKIPGCS 463
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 153/377 (40%), Positives = 228/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+HS
Sbjct: 188 WNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWID 247
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LY K G+ E A +F+ + + SWN +I G + KEA+
Sbjct: 248 DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 307
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +E+ +H Y+ + + + SLIDM
Sbjct: 308 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF I ++SSW +MI G+A +G AN A D F MR++ I P+ +TF
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F MK Y+I P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 428 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 487
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYA+ G W EV +
Sbjct: 488 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 547
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA++ + + K+P S
Sbjct: 548 IRALLNDKGMKKVPGCS 564
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+CYT P +LK+ + A G+Q+H +
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
+LG + + + + IS+Y + G E ARKVFD++
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
P + + SWNA+I+G ++ G KEA+++F + K PD+ TMVSV SAC
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 236 IELGRQVHSWIDD--HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLI 293
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G ++ G+ H + + K +
Sbjct: 294 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVY-INKRLK 352
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ +H ++D+ + G +E A+ + + + ++ N +I+G M
Sbjct: 353 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 401
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 44/315 (13%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT + K+AL ++ M R+G P+ T+ +L A L A+EIGR
Sbjct: 282 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 341
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +Y+K GD E A++VFD R L SWNA+I G +
Sbjct: 342 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 401
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
GRA A D+F ++K EPDD+T V + SAC G L+L +++F+
Sbjct: 402 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG----RHIFR--------- 448
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
M YK+ P + + MI +GL EA + + M
Sbjct: 449 --------------SMKEDYKI-----TPKLEHYGCMIDLLGHSGLFKEAEEMINTME-- 487
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLE 378
+ P+ V + +L AC G V+ G+ + +N+ +IEP+ Y + ++ AG
Sbjct: 488 -MEPDGVIWCSLLKACKMHGNVELGESY---AQNLIKIEPKNPGSYVLLSNIYATAGRWN 543
Query: 379 EA---RAMVEGMPMK 390
E RA++ MK
Sbjct: 544 EVAKIRALLNDKGMK 558
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 38/296 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S I + F+ A VF+ E L WN + G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T + +C Q+H +V ++
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL-- 121
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY + GR++ A KV F EI
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC ++ G+
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G +E A + EG+ K +V+ W L+G
Sbjct: 242 VHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG 295
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 228/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+HS
Sbjct: 203 WNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWID 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LY K G+ E A +F+ + + SWN +I G + KEA+
Sbjct: 263 DHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 322
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +E+ +H Y+ + + + SLIDM
Sbjct: 323 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDM 382
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF I ++SSW +MI G+A +G AN A D F MR++ I P+ +TF
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 442
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F MK Y+I P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 502
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ + NV++GE A++L ++EP + G+YV+LSNIYA+ G W EV +
Sbjct: 503 MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 562
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA++ + + K+P S
Sbjct: 563 IRALLNDKGMKKVPGCS 579
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 178/349 (51%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+CYT P +LK+ + A G+Q+H +
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
+LG + + + + IS+Y + G E ARKVFD++
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
P + + SWNA+I+G ++ G KEA+++F + K PD+ TMVSV SAC
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 251 IELGRQVHSWIDD--HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLI 308
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G ++ G+ H + + K +
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVY-INKRLK 367
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ +H ++D+ + G +E A+ + + + ++ N +I+G M
Sbjct: 368 GVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 416
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 148/315 (46%), Gaps = 44/315 (13%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT + K+AL ++ M R+G P+ T+ +L A L A+EIGR
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGR 356
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +Y+K GD E A++VFD R L SWNA+I G +
Sbjct: 357 WIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM 416
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
GRA A D+F ++K EPDD+T V + SAC G L+L +++F+
Sbjct: 417 HGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG----RHIFR--------- 463
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
M YK+ P + + MI +GL EA + + M
Sbjct: 464 --------------SMKEDYKI-----TPKLEHYGCMIDLLGHSGLFKEAEEMINTME-- 502
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLE 378
+ P+ V + +L AC V+ G+ + +N+ +IEP+ Y + ++ AG
Sbjct: 503 -MEPDGVIWCSLLKACKMYANVELGESY---AQNLIKIEPKNPGSYVLLSNIYATAGRWN 558
Query: 379 EA---RAMVEGMPMK 390
E RA++ MK
Sbjct: 559 EVAKIRALLNDKGMK 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 122/296 (41%), Gaps = 38/296 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S I + F+ A VF+ E L WN + G
Sbjct: 19 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T + +C Q+H +V ++
Sbjct: 79 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL-- 136
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY + GR++ A KV F EI
Sbjct: 137 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 196
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC ++ G+
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 256
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G +E A + EG+ K +V+ W L+G
Sbjct: 257 VHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGG 310
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/417 (38%), Positives = 231/417 (55%), Gaps = 40/417 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N +I ++ +++++IY M + G+ PD +T P +LKA +L ++G +LH L
Sbjct: 74 FLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGL 133
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G ES+ F + +SLY K G + A KVFD+ PE+ + +W AII+G G+ +EA
Sbjct: 134 VVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREA 193
Query: 207 IDMFI---------------------------GLKKC-----------GFEPDDVTMVSV 228
IDMF GL K GF PD MV V
Sbjct: 194 IDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGV 253
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
AC LG LEL +++ + ++ +LIDMY KCGRMD A++VF + +
Sbjct: 254 LCACARLGALELGNWASN--LMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKK 311
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
++ W + I G A +G A F M +SGI P+ TFVG+L AC H G V EG+ +F
Sbjct: 312 DIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYF 371
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
M+ V+ + P HYGCMVDLLGRAG L+EA +V+ MPM+AN ++WG L+G C +
Sbjct: 372 NSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRD 431
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ E V K L LEP + G YV+LSNIY++ WE+ +IR++M R + K+P YS
Sbjct: 432 TQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYS 488
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 147/309 (47%), Gaps = 44/309 (14%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+ +H+ +RLGL+ + + + + G+ + ++F + E + +N +I GL +
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+E+I+++ ++K G PD T + AC L D +L +++H V VK+ +SD
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLV--VKAGCESDAF 144
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT-------------------------- 294
+ SL+ +YGKCG +D A+KVF +I + NV++WT
Sbjct: 145 VNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVF 204
Query: 295 ------------SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
SMI GYA+NGL EALD F M G RP+ VGVL AC G ++
Sbjct: 205 DGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALE 264
Query: 343 EGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G +M +N + P ++D+ + G ++ A + GM K ++V+W +
Sbjct: 265 LGNWASNLMDRNEFLGNPVLG--TALIDMYAKCGRMDSAWEVFRGM-RKKDIVVWNAAIS 321
Query: 402 ACEKFGNVK 410
G+VK
Sbjct: 322 GLAMSGHVK 330
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 227/375 (60%), Gaps = 2/375 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y ++ K+AL ++ M +A V P+ T+ VL A Q AL++G + S
Sbjct: 229 WNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIE 288
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL SN + I +YSK GD + AR++FD+ ER + SWN +I G + KEA+
Sbjct: 289 DRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALA 348
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G EP ++T +S+ +C LG ++L +H Y+ K+ T + SLID+
Sbjct: 349 LFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI--NKNFNSVSTSLSTSLIDL 406
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A +VF + +++SW +MI G A +G A++A + F M GI PN +TF
Sbjct: 407 YAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITF 466
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G V G+ FF M Y+I P+ HYGCM+DLLGRAGL EEA ++++ M
Sbjct: 467 VGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNME 526
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + IWG L+GAC G V++GE VA+ L ELEP + GAYV+LSNIYA G W++V R
Sbjct: 527 VKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVAR 586
Query: 449 IRAVMKHRNLAKIPA 463
IR + R + K+P
Sbjct: 587 IRTRLNDRGMKKVPG 601
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 208/432 (48%), Gaps = 71/432 (16%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHM---------LHSYS 84
HV S+ + E P+ + LSKC ++ QI+AHII+T + L +S
Sbjct: 15 HVLPSSDPPYRVLQEHPSLKL---LSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFS 71
Query: 85 AA---------------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
A F WN++IR + +P AL ++ M +GV P+ YT
Sbjct: 72 AVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYT 131
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD------------ 171
P +LK+ +L + G+Q+H+ ++LG S+ F + I++Y+++G+
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191
Query: 172 -------------------FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
++AR++FDE P + + SWNA+IAG +Q GR+KEA+ +F
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFED 251
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
++K P++ T+VSV SAC L+L + ++ S+ ++N+LIDMY KC
Sbjct: 252 MRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWI--EDRGLCSNLKLVNALIDMYSKC 309
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A ++F ++ + +V SW MI GY EAL F M SG+ P +TF+ +L
Sbjct: 310 GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSIL 369
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA- 391
+C H G + GK + + ++DL + G + AR + +GM +K+
Sbjct: 370 PSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS-LIDLYAKCGNIVAARQVFDGMKIKSL 428
Query: 392 ---NVVIWGCLM 400
N +I G M
Sbjct: 429 ASWNAMICGLAM 440
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 39/308 (12%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI--SLYSKAGDFEKARKVFDENPER 185
L + CQ ++ +Q+H+ ++ GL + F S I S S++GD A +F+ E
Sbjct: 35 LLSKCQ--SIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
L WN++I GLS A+ F+ + G EP+ T + +C L Q+H
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGR------------------------------- 274
+V ++ SD + SLI+MY + G
Sbjct: 153 AHVLKLGF--VSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGY 210
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
MD A ++F E+ +V SW +MI GYA G + EAL F MR++ + PN T V VLSA
Sbjct: 211 MDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSA 270
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C + G +++ + ++D+ + G L+ AR + + M ++ +V+
Sbjct: 271 CAQSNALDLGNSMRSWIED-RGLCSNLKLVNALIDMYSKCGDLQTARELFDDM-LERDVI 328
Query: 395 IWGCLMGA 402
W ++G
Sbjct: 329 SWNVMIGG 336
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 226/377 (59%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ VL A Q ++E+GRQ+HS
Sbjct: 203 WNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWID 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LY K G+ E A +F+ + + SWN +I G + KEA+
Sbjct: 263 DHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 322
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P++VTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 323 LFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDM 382
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + ++SSW +MI G+A +G AN A D F MR+ GI P+ +TF
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITF 442
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y+I P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME 502
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYA+ G W EV +
Sbjct: 503 MDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAK 562
Query: 449 IRAVMKHRNLAKIPAYS 465
RA++ + + K+P S
Sbjct: 563 RRALLNDKGMKKVPGCS 579
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 176/349 (50%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G++P+ YT P +LKA + A G+Q+H +
Sbjct: 71 WNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVL 130
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
+LG + + + + I++Y K G E ARKVFD++
Sbjct: 131 KLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQK 190
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
P + + SWNA+I+G ++ G KEA+++F + K +PD+ TMV+V SAC
Sbjct: 191 MFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSAS 250
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 251 IELGRQVHSWIDD--HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLI 308
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 309 GGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVY-IDKRLK 367
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A+ + + M ++ N +I+G M
Sbjct: 368 GVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 151/315 (47%), Gaps = 44/315 (13%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 297 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGR 356
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +Y+K GD E A++VFD R L SWNA+I G +
Sbjct: 357 WIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
GRA A D+F ++K G EPDD+T V + SAC G L+L +++F+
Sbjct: 417 HGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG----RHIFR--------- 463
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
M YK+ P + + MI +GL EA + + M
Sbjct: 464 --------------SMTEDYKI-----TPKLEHYGCMIDLLGHSGLFKEAEEMINSME-- 502
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA-HYGCMVDLLGRAGLLE 378
+ P+ V + +L AC G V+ G+ F +N+ +IEP+ + Y + ++ AG
Sbjct: 503 -MDPDGVIWCSLLKACKMHGNVELGESF---AQNLIKIEPKNSGSYVLLSNIYATAGRWN 558
Query: 379 EA---RAMVEGMPMK 390
E RA++ MK
Sbjct: 559 EVAKRRALLNDKGMK 573
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 154/391 (39%), Gaps = 76/391 (19%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S I + F+ A VFD E L WN + G
Sbjct: 19 RIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGH 78
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T + AC Q+H +V ++
Sbjct: 79 ALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDL-- 136
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY K GR + A KV F EI
Sbjct: 137 DLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP 196
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW ++I GYA G EAL+ F M ++ ++P+ T V VLSAC ++ G+
Sbjct: 197 VKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQ 256
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG----- 401
+ + + ++DL + G +E A + EG+ K +V+ W L+G
Sbjct: 257 VHSWIDD-HGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGGYTHM 314
Query: 402 ------------------------------ACEKFGNVKMGEWVAKHL-QELEPWSDGAY 430
AC G + +G W+ ++ + L+ S+ +
Sbjct: 315 NLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSS 374
Query: 431 VVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
+ S ++YA G E +++ M +R+L+
Sbjct: 375 LRTSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 246/427 (57%), Gaps = 14/427 (3%)
Query: 44 LDTHEDP--AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEA 101
L H DP A + T ++C + +++ I + + WN++I Y +
Sbjct: 151 LALHSDPHTAHSLITAYARCGLVASARKVFDEI-------PHRDSVSWNSMIAGYAKAGC 203
Query: 102 PKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCES 160
++A++++ M R G PD +L +L A +L LE+GR + V G+ N + S
Sbjct: 204 AREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGS 263
Query: 161 GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
IS+Y+K G+ E AR++FD R + +WNA+I+G +Q+G A EAI +F G+K+
Sbjct: 264 ALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTA 323
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
+ +T+ +V SAC ++G L+L Q+ +Y Q + D + +LIDMY K G +D A +
Sbjct: 324 NKITLTAVLSACATIGALDLGKQIDEYASQRGFQH--DIFVATALIDMYAKSGSLDNAQR 381
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNHVTFVGVLSACVHG 338
VF ++ Q N +SW +MI AA+G A EAL F +M + G RPN +TFVG+LSACVH
Sbjct: 382 VFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHA 441
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V EG F+MM ++ + P+ HY CMVDLL RAG L EA ++ MP K + V G
Sbjct: 442 GLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGA 501
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+GAC NV +GE V + + E++P + G Y++ S IYA+ +WE+ R+R +M+ + +
Sbjct: 502 LLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGI 561
Query: 459 AKIPAYS 465
K P S
Sbjct: 562 TKTPGCS 568
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 211/407 (51%), Gaps = 24/407 (5%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML-HSYSAAFHWNNIIR-LYTRLEAPKKALDIYIFMSRA 115
LSK +L N Y+ ++ +H+ H AF N +IR L T AL ++ M
Sbjct: 61 LSKAIHLK--NFPYSSLLFSHIAPHPNDYAF--NIMIRALTTTWHNYPLALSLFHRMMSL 116
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
+ PD +T P + L +L HSL +L L S+ I+ Y++ G A
Sbjct: 117 SLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASA 176
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGS 234
RKVFDE P R SWN++IAG ++ G A+EA+++F + ++ GFEPD++++VS+ ACG
Sbjct: 177 RKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGE 236
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LGDLEL V +V V+ ++ + ++LI MY KCG ++ A ++F + +V +W
Sbjct: 237 LGDLELGRWVEGFV--VERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWN 294
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
++I GYA NG+A+EA+ FH M+E + N +T VLSAC G + GK E
Sbjct: 295 AVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDE----- 349
Query: 355 YQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
Y + F H ++D+ ++G L+ A+ + + MP K N W ++ A G K
Sbjct: 350 YASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQK-NEASWNAMISALAAHGKAK 408
Query: 411 MGEWVAKHLQE----LEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
+ +H+ + P +D +V L + GL +E R+ +M
Sbjct: 409 EALSLFQHMSDEGGGARP-NDITFVGLLSACVHAGLVDEGYRLFDMM 454
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/475 (34%), Positives = 258/475 (54%), Gaps = 26/475 (5%)
Query: 8 ISLSSLRMKSSHP---LLHRLCKTHTFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTN 63
I+L++ R ++HP L+ + +T ++ H + F D I A LS +
Sbjct: 25 ITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPS 84
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCY 122
L Q++ I ++ + WN +IR Y P ++L I++ M ++ PD +
Sbjct: 85 LDYAQQVFDQIPHPNL-------YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T P ++KA+ +L L G+ H + +++ L S+ F + I Y+K G+ +VF
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNX 197
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P R + SWN++I Q G +EA+++F ++ +P+ +TMV V SAC D E
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA- 301
VH Y+ +++ + N+++DMY KCG ++ A ++F ++ + ++ SWT+M+VGYA
Sbjct: 258 WVHSYI--ERNRIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAK 315
Query: 302 ------ANGLA-----NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
A GLA +A+ F M+E ++PN VTF +L AC H G V+EG+ FF
Sbjct: 316 IGEYDAAQGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQ 375
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M+ VY + P HY CMVD+LGRAGLLEEA ++E MPM +WG L+GAC NV
Sbjct: 376 MELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVV 435
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ E L ELEP + GAYV+LSNIYA G W+ V +R +M+ L K P S
Sbjct: 436 LAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCS 490
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 237/379 (62%), Gaps = 3/379 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS-LA 147
W +I+ +T+ +A++ ++ M + D TL +VL A L L +G+++HS +
Sbjct: 180 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 239
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ ++++ F + + +Y K D A KVFDE P + + +WNA+I+GL+ GR +EA+
Sbjct: 240 HYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREAL 299
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D F ++ G +PD+VT+V V ++C +LG LE+ VH Y+ ++ +D + N+L+D
Sbjct: 300 DTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYM--RRNHILADKFVGNALLD 357
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +D A++VF + + +V S+T+MI G A +G AN A F M GI PN VT
Sbjct: 358 MYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVT 417
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+G+L AC HGG V EGK +F M + Y++ P+ HYGCM+DLLGRAGL++EA ++ M
Sbjct: 418 FLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKM 477
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
++ +V G L+GAC GNV +GE V + L EL+P +G Y++++N+Y+S W++
Sbjct: 478 EIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDAL 537
Query: 448 RIRAVMKHRNLAKIPAYSL 466
+IR MK++ + K P SL
Sbjct: 538 KIRKTMKNKKMRKTPGCSL 556
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 173/318 (54%), Gaps = 7/318 (2%)
Query: 75 IRTHML-HSYSAAFHW---NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
IR+ +L HS+ A F N IIR +R ++ M G+ PD +T+P+VLKA
Sbjct: 60 IRSILLTHSHDAQFCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKA 119
Query: 131 SCQLFALEIGRQLHSLAVRLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
+ + G+Q+H+ +++ G+ N + + + LYS G +KVFDE P R L S
Sbjct: 120 LALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVS 179
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
W +I ++ G A++ F+ + D T+V V SAC +LGDL L +VH Y+
Sbjct: 180 WTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIR 239
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
K+D + N+L+DMY KC ++ AYKVF E+ NV +W +MI G A G EA
Sbjct: 240 HYID-MKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREA 298
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD 369
LD F M++ G++P+ VT VGVL++C + G ++ GK M+ + + +F ++D
Sbjct: 299 LDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVG-NALLD 357
Query: 370 LLGRAGLLEEARAMVEGM 387
+ + G ++EA + E M
Sbjct: 358 MYAKCGSIDEAFRVFESM 375
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 129/305 (42%), Gaps = 40/305 (13%)
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
NAII +S++ ++ + G EPD T+ V A + + Q+H +
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ + N+L+ +Y CG + KVF E ++ SWT++I + GL + A+
Sbjct: 139 T-GMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAV 197
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F M + +R + T V VLSAC + G + G+ +++ ++ ++D+
Sbjct: 198 EAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDM 257
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCL------------------------------- 399
+ L A + + MP+K NVV W +
Sbjct: 258 YLKCDDLNSAYKVFDEMPVK-NVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVT 316
Query: 400 ----MGACEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVM 453
+ +C G +++G+WV +++ +D +V L ++YA G +E R+ M
Sbjct: 317 LVGVLNSCANLGVLEIGKWVHAYMRRNHILAD-KFVGNALLDMYAKCGSIDEAFRVFESM 375
Query: 454 KHRNL 458
K R++
Sbjct: 376 KRRDV 380
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 228/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + + PD T+ V+ A Q ++E+GRQ+HS
Sbjct: 234 WNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWID 293
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + + LYSK G+ E A +F+ + + SWN +I G + KEA+
Sbjct: 294 DHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 354 LFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDM 413
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF I ++SSW +MI G+A +G A+ A D F MR+ GI P+ +TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITF 473
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC G + G+H F M Y+I P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 474 VGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME 533
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G YV+LSNIYA+ G W EV +
Sbjct: 534 MEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAK 593
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA++ + + K+P S
Sbjct: 594 IRALLNDKGMKKVPGCS 610
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 174/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P +LK+ + A + G+Q+H +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVL 161
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER----------------------- 185
+LG + + F + IS+Y + G E ARKVFD +P R
Sbjct: 162 KLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQK 221
Query: 186 --------KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGS 281
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++NSL+D+Y KCG ++ A +F + +V SW ++I
Sbjct: 282 IELGRQVHSWIDD--HGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLI 339
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG RPN VT + +L AC H G + G+ H + + K +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLK 398
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ ++D+ + G +E A + + K+ N +I+G M
Sbjct: 399 SATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 152/324 (46%), Gaps = 51/324 (15%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRW 388
Query: 143 LHS-LAVRLGLESN-EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H + RL +N + I +Y+K GD E A +VF+ + L SWNA+I G +
Sbjct: 389 IHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
GRA A D+F ++K G EPDD+T V + SAC G L+L +++F+ ++
Sbjct: 449 GRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG----RHIFRTMTQD----- 499
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
YK+ P + + MI +GL EA + + M
Sbjct: 500 ------------------YKI-----TPKLEHYGCMIDLLGHSGLFKEAEEMINNME--- 533
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL------LGRA 374
+ P+ V + +L AC G V+ G+ F +N+ +IEP + GC V L GR
Sbjct: 534 MEPDGVIWCSLLKACKIRGNVELGESF---AQNLIKIEPE--NPGCYVLLSNIYATAGRW 588
Query: 375 GLLEEARAMVEGMPMKANVVIWGC 398
+ + RA++ MK + GC
Sbjct: 589 NEVAKIRALLNDKGMKK---VPGC 609
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S + L + F+ A VF+ E L WN + G
Sbjct: 50 RLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 109
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV------ 251
+ A+ +++ + G P+ T + +C + Q+H +V ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDL 169
Query: 252 -----------------------KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
D + +LI Y G ++ A K+F EI
Sbjct: 170 FVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK 229
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V SW +MI GYA G EAL+ F M ++ IRP+ T V V+SAC G ++ G+
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G LE A + EG+ K +V+ W L+G
Sbjct: 290 SWIDD-HGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYK-DVISWNTLIGG 341
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN+ W +M G+A + AL + M G+ PN TF +L +C
Sbjct: 87 AISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 146
Query: 338 GGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+EG+ ++K Y ++ F H ++ + + G LE+AR + + P + +VV +
Sbjct: 147 SKAFKEGQQIHGHVLKLGYDLD-LFVHTS-LISVYVQNGRLEDARKVFDRSPHR-DVVSY 203
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE-VERIRAVMK 454
L+ G + E K E+ ++ + + YA G ++E +E + +MK
Sbjct: 204 TALIKGYASRGYI---ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMK 259
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 246/447 (55%), Gaps = 33/447 (7%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS-------------------------- 82
D +VA + +CT + L I AH++R ++
Sbjct: 6 DQGSLVAA-IKRCTRVGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIF 64
Query: 83 ----YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
+ F WN IIR Y+ ++P A+ +Y M G+ P+ YT VLKA C+L L
Sbjct: 65 SCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLC 124
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G++LHS V++GL+ +G I LY+ G + A +FDE PE SW+ +++G +
Sbjct: 125 EGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYA 184
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q+G+A EA+ +F ++ D T+ SV CG LG L+L VH Y+ K K D
Sbjct: 185 QNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYM--DKEGVKID 242
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
++ +L+ MY KCG +D A KVF + + +V++W++MI GYA +G +AL F M+
Sbjct: 243 VVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKR 302
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
S PN VTF VLSAC H G V++G FE M Y+I P+ HYGCMVDL RAG++
Sbjct: 303 SKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVG 362
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
A ++ MP++ NVV+W L+GAC+ G +GE +++ + +L+P S YV++SN+YA
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYA 422
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
S G W V ++R++MK + K +S
Sbjct: 423 SLGRWSSVCQVRSLMKDKAPKKQHGWS 449
>gi|449519932|ref|XP_004166988.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 247/458 (53%), Gaps = 15/458 (3%)
Query: 15 MKSSHPLL----HRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQI 70
+ + H LL H H F H I + D+ + LS NL +
Sbjct: 27 LSTKHQLLSLLKHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSL 86
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
H H +SA WN IIR Y+ ++P++A+ ++ M R GV P+ T P +LKA
Sbjct: 87 LFHC------HFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKA 140
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
L L+ G+Q H++A++ GL+ + + + I+ Y ARKVFDE ER L SW
Sbjct: 141 CATLATLQEGKQFHAIAIKCGLDLDVYVRNTLINFYGSCKRMSGARKVFDEMTERTLVSW 200
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
NA+I ++ EAID F+ + GFEPD+ TMV + SAC LG+L L VH V
Sbjct: 201 NAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQV-- 258
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
V + + + +DMY K G + A VF + Q +V +W++MI+G A +G ANEA+
Sbjct: 259 VGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAI 318
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F M S I PNHVTF+GVL AC H G V + H+F +M+ VY I+P HYG MVD+
Sbjct: 319 ELFTNMTSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDV 378
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC---EKFGNVKMGEWVAKHLQELEPWSD 427
LGRAG ++EA ++ MP++ + ++W L+ AC + G ++ E K L ELEP
Sbjct: 379 LGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRG 438
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G V+++N +A G+W++ R MK R + K+ S
Sbjct: 439 GNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGES 476
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 252/464 (54%), Gaps = 64/464 (13%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAA-----------------------------FHW 89
++C+ + +L QI+A++I+T ++ AA F W
Sbjct: 33 TRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYLVFTRINHKNPFVW 92
Query: 90 NNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N IIR ++R P+ A+ I+I M S V P T P V KA L GRQLH
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRV 152
Query: 148 VRLGLESNEFCESGFISLY-------------------------------SKAGDFEKAR 176
++ GLE + F + + +Y +K G ++A+
Sbjct: 153 IKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQ 212
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+FDE P+R SWN++I+G ++GR K+A++MF +++ +PD TMVS+ +AC LG
Sbjct: 213 KLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLG 272
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
E +HKY+ V+++ + +++++ +LIDMY KCG + KVF +S W SM
Sbjct: 273 ASEQGRWIHKYI--VRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSM 330
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I+G A NG A+D F + +G+ P+ V+F+GVL+AC H G+V + FF +M+ Y
Sbjct: 331 ILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYM 390
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEP HY CMV++LG AGLL+EA A+++ MP++ + +IW L+ AC K GNV+M + A
Sbjct: 391 IEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAA 450
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
L+ L+P YV++SN YAS GL+EE R +MK R + K
Sbjct: 451 NCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEK 494
>gi|356570151|ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 465
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 247/440 (56%), Gaps = 37/440 (8%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHS---------YSAA----------------------FH 88
KCT L QL Q++A +I + ++ + +S A F
Sbjct: 27 KCTTLDQLKQVHAQMIVSAVVATDPFAASRLFFSCALSPFGDLSLAFRIFHSTPRPNSFM 86
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR T AP AL +Y+ M R+ VLP +T P +LKA ++ + +Q+H +
Sbjct: 87 WNTLIRAQT--HAPH-ALSLYVAMRRSNVLPGKHTFPFLLKACARVRSFTASQQVHVHVI 143
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ + + YS +G AR+VFDE PE+ W ++ G +Q+ + EA+
Sbjct: 144 KFGLDFDSHVVDALVRCYSVSGHCVSARQVFDETPEKISSLWTTMVCGYAQNFCSNEALR 203
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LID 267
+F + GFEP T+ SV SAC G LEL ++H+++ +VK + ++L + L+
Sbjct: 204 LFEDMVGEGFEPGGATLASVLSACARSGCLELGERIHEFM-KVKGVGLGEGVILGTALVY 262
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR-PNHV 326
MY K G + +A ++F E+ + NV +W +MI G A G ++AL F M++ G+ PN V
Sbjct: 263 MYAKNGEIAMARRLFDEMPERNVVTWNAMICGLGAYGYVDDALGLFEKMKKEGVVVPNGV 322
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFVGVLSAC H G + G+ F MK+VY IEP+ HYGC+VDLLGR G L EA +V+G
Sbjct: 323 TFVGVLSACCHAGLIDVGREIFRSMKSVYGIEPKIEHYGCLVDLLGRGGWLLEAVELVKG 382
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP KA+VVI G L+ A GN ++ E V K + LEP + G +V LSN+YA G W+EV
Sbjct: 383 MPWKADVVILGTLLAASRISGNTEVAERVVKDILALEPQNHGVHVALSNMYAEAGQWQEV 442
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
R+R MK L K P +SL
Sbjct: 443 LRLRKTMKEERLKKAPGWSL 462
>gi|297733959|emb|CBI15206.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 228/376 (60%), Gaps = 3/376 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR R P+KA + Y M G + D +T ++K QL + +G+Q+H
Sbjct: 16 GFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKVCGQLGSDLLGKQIHC 75
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ GLE + F + + +Y D E A +F+E P+ L +WN II GR KE
Sbjct: 76 NVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMPKSYLVAWNTIIDCNVYCGRYKE 135
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
AI++F + + G +PDD T V SAC +LG+L++ +VH + + + + NSL
Sbjct: 136 AIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHSCIDH--TGLGNVVSVSNSL 193
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI-RPN 324
IDMY KCG ++ AY++F ++ N+ SW +MI+G A +G +EAL+ F M E + PN
Sbjct: 194 IDMYAKCGVVEAAYEIFNKMKGRNIVSWNTMILGLAMHGHGDEALELFSKMLEEKLATPN 253
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+GVL AC HGG V+EG+ +F++M+ Y I+P HYG MVD+LGRAGL+EEA ++
Sbjct: 254 EVTFLGVLCACSHGGMVEEGRRYFDIMRRDYNIQPTIKHYGSMVDILGRAGLVEEAYRLI 313
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP+++N ++W L+ AC GN+++ E V + L ELEP YV+L+N+YAS G W
Sbjct: 314 KSMPIESNSIVWRTLLAACRVHGNLELAEQVRQQLLELEPDHSSDYVLLANMYASAGQWN 373
Query: 445 EVERIRAVMKHRNLAK 460
+V R+R M R + K
Sbjct: 374 KVVRVRKSMHIRGVQK 389
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 7/194 (3%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
MD A +VF +I+ P+ W +MI G +A + + M+ G ++ T+ ++
Sbjct: 1 MDYALRVFGKIENPDGFLWNTMIRGLGRTRQPEKAFEFYKRMQVKGEVLDNFTYSFLVKV 60
Query: 335 CVHGGKVQEGKHFFEMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
C G GK ++ NV + +E +V + G +E A + E MP K+
Sbjct: 61 CGQLGSDLLGK---QIHCNVLKHGLEEHVFVRNTLVHMYGMFKDIEAATHLFEEMP-KSY 116
Query: 393 VVIWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+V W ++ G K E + LQ D +VV + A+ G + R+ +
Sbjct: 117 LVAWNTIIDCNVYCGRYKEAIELFFRMLQSGLKPDDATFVVTLSACAALGELDIGRRVHS 176
Query: 452 VMKHRNLAKIPAYS 465
+ H L + + S
Sbjct: 177 CIDHTGLGNVVSVS 190
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/379 (40%), Positives = 229/379 (60%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++ YT+ ++ + ++ M + D TL VL A +L LE+G ++
Sbjct: 193 WNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVE 252
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL+ N + + +Y+K G + AR++FD+ R + +W+A+I+G SQ R +EA+D
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALD 312
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LID 267
+F ++K +P+++TMVS+ S+C LG LE VH F +K K+ T+ L + L+D
Sbjct: 313 LFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVH---FFIKKKRMKLTVTLGTALMD 369
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG ++ + +VF ++ NV SWT +I G A+NG +AL+ F+ M E + PN VT
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVLSAC H G V EG+ F M + IEPR HYGCMVD+LGRAGL+EEA ++ M
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ N VIW L+ +C+ NV++GE K L LEP G Y++LSNIYAS G WE+
Sbjct: 490 PIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDAL 549
Query: 448 RIRAVMKHRNLAKIPAYSL 466
++R MK + + K P SL
Sbjct: 550 KVRGEMKEKGIKKTPGCSL 568
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/407 (31%), Positives = 218/407 (53%), Gaps = 41/407 (10%)
Query: 36 TISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH------- 88
T +A +S E+P ++ L +C + LN+I+AH+I+T +L A +
Sbjct: 12 TPTAKTSISLFPENPKTLI---LEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAI 68
Query: 89 -----------------------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
+N +IR +T ++P +A+ ++ M V PD +T P
Sbjct: 69 LLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFP 128
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
+LK +L AL G Q+H+L ++ G S+ F ++ I +Y+ G+ E AR+VFDE ER
Sbjct: 129 CILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSER 188
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+ +WN++ AG ++ G +E + +F + + D+VT+VSV +ACG L DLEL ++
Sbjct: 189 NVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWIN 248
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
+YV + K + ++ SL+DMY KCG++D A ++F ++D+ +V +W++MI GY+
Sbjct: 249 RYVEE--KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASR 306
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAH 363
EALD FH M+++ I PN +T V +LS+C G ++ GK HFF K +++
Sbjct: 307 CREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKK---RMKLTVTL 363
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D + G +E + + MP+K NV+ W L+ G K
Sbjct: 364 GTALMDFYAKCGSVESSIEVFGKMPVK-NVLSWTVLIQGLASNGQGK 409
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/415 (38%), Positives = 237/415 (57%), Gaps = 34/415 (8%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
+ F WN++I R +AL + M + + P+ T P +K+ L L GRQ
Sbjct: 39 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 98
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE---------------------- 181
H A+ G E + F S + +YSK G+ AR +FDE
Sbjct: 99 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 158
Query: 182 ---------NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSA 231
ER + SWN+IIA +Q+G + E++++F + K G + VT+ +V A
Sbjct: 159 HRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLA 218
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C G L +H V +K +S+ + S+IDMY KCG++++A K F + + NV
Sbjct: 219 CAHSGSQRLGKCIHDQV--IKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVK 276
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW++M+ GY +G A EAL+ F+ M +G++PN++TFV VL+AC H G ++EG H+F+ M
Sbjct: 277 SWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAM 336
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ + +EP HYGCMVDLLGRAG L+EA +++GM ++ + V+WG L+GAC NV +
Sbjct: 337 SHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDL 396
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
GE A+ L EL+P + G YV+LSNIYA G WE+VER+R +MK+ L K P +SL
Sbjct: 397 GEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSL 451
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+D+ NV SW S+I A +G + EAL F MR+ ++PN TF + +C + G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + ++ EP +VD+ + G L +AR + + + + N+V W ++
Sbjct: 96 RQAHQQAL-IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMI 149
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 254/469 (54%), Gaps = 64/469 (13%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAA-----------------------------FHWN 90
CT++ L +I+A +I+T + AA F WN
Sbjct: 5 NCTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFCTSPAGDINYAYLVFTQIRNPNLFVWN 64
Query: 91 NIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
IIR +++ P A+ ++I M + P T P V KA QL G QLH +
Sbjct: 65 TIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVI 124
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
+LGLE+++F ++ +++Y +K G+ +K+R+
Sbjct: 125 KLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRR 184
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ R SWN++I+G + GR EA+++F +++ G +P + TMVS+ +AC LG
Sbjct: 185 LFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGA 244
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L +H Y+ VK+ +++++ ++IDMY KCG +D A +VF + +S W S+I
Sbjct: 245 LRQGEWIHDYI--VKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLI 302
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A +G NEA+ F + S ++P+HV+F+GVL+AC H G V K +F +M Y+I
Sbjct: 303 LGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKI 362
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HY CMVD+LGRAGLLEEA +++ MP+ + +IWG L+ +C ++GN++M + AK
Sbjct: 363 EPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAK 422
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ EL+P ++++LSN+YA+ +EE R +K + + K P SL
Sbjct: 423 RVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSL 471
>gi|413925046|gb|AFW64978.1| hypothetical protein ZEAMMB73_457124 [Zea mays]
Length = 592
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/374 (42%), Positives = 224/374 (59%), Gaps = 3/374 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y R P KAL + M + V D TL L AS + ++GR HSL V
Sbjct: 28 WNTIISGYLRCGMPNKALQAFGQMVKEPVRLDDVTLLNALVASAKAGKAKVGRLCHSLVV 87
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G N + S IS+Y+K G E ARKVF ER + W ++I+G +Q G+ K+A+D
Sbjct: 88 VNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKKAVD 147
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G + DD T+ +V S+C +G L+L VH Y V K ++ NSLIDM
Sbjct: 148 LFRDMQITGMKADDGTIATVVSSCAQMGALDLGRYVHAYC-DVHGLGKELSVK-NSLIDM 205
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG + A+++F + + +V SWT+MI+G+ NGL NEALD F M G + PN VT
Sbjct: 206 YSKCGDITKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCNEALDLFAQMEGEGKVMPNEVT 265
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVL++C HGG V++G H F+ M VY + PR HYGCMVDLLGRA LL EA + GM
Sbjct: 266 FLGVLTSCSHGGLVEQGFHHFQRMSMVYNLAPRIEHYGCMVDLLGRAKLLTEAEQFINGM 325
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ +VV+W L+ AC G V + E+VA+ + ELEP +V+LSN+YA+ W +V
Sbjct: 326 PIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYAATSRWVDVN 385
Query: 448 RIRAVMKHRNLAKI 461
++R M +++I
Sbjct: 386 KLRTSMDSCRMSQI 399
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 6/238 (2%)
Query: 165 LYSKAGDFEKARKVFDENPERKLG--SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+YS AR+V D P+ SWN II+G + G +A+ F + K DD
Sbjct: 1 MYSSCSYPTTARQVLDSAPQGACDTVSWNTIISGYLRCGMPNKALQAFGQMVKEPVRLDD 60
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+++ A G ++ H V V + + M +SLI MY KCG ++ A KVF
Sbjct: 61 VTLLNALVASAKAGKAKVGRLCHSLV--VVNGAGINCYMGSSLISMYAKCGLVEDARKVF 118
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + NV WTSMI GY G +A+D F M+ +G++ + T V+S+C G +
Sbjct: 119 HGMHERNVVCWTSMISGYTQLGKFKKAVDLFRDMQITGMKADDGTIATVVSSCAQMGALD 178
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
G+ + +V+ + + ++D+ + G + +A + G+ K +V W ++
Sbjct: 179 LGR-YVHAYCDVHGLGKELSVKNSLIDMYSKCGDITKAHEIFCGL-TKRDVFSWTAMI 234
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 18/152 (11%)
Query: 268 MYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
MY C A +V Q + SW ++I GY G+ N+AL F M + +R +
Sbjct: 1 MYSSCSYPTTARQVLDSAPQGACDTVSWNTIISGYLRCGMPNKALQAFGQMVKEPVRLDD 60
Query: 326 VTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGC-----MVDLLGRAGLLE 378
VT + L A GK + G+ H ++ A C ++ + + GL+E
Sbjct: 61 VTLLNALVASAKAGKAKVGRLCHSLVVVNG--------AGINCYMGSSLISMYAKCGLVE 112
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+AR + GM + NVV W ++ + G K
Sbjct: 113 DARKVFHGM-HERNVVCWTSMISGYTQLGKFK 143
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 222/406 (54%), Gaps = 9/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC NL +++ + S ++ W +I Y + + +++ M G+ P
Sbjct: 274 KCENLAYARRVFDGL-------SKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFP 326
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ T+ ++K ALE+G+ LH+ +R G + + FI +Y K GD AR VF
Sbjct: 327 NEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF 386
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D + L W+A+I+ +Q+ EA D+F+ + CG P++ TMVS+ C G LE
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+ +H Y+ K K D ++ S +DMY CG +D A+++F E ++S W +MI G
Sbjct: 447 MGKWIHSYI--DKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISG 504
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+A +G AL+ F M G+ PN +TF+G L AC H G +QEGK F M + + P
Sbjct: 505 FAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTP 564
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+ HYGCMVDLLGRAGLL+EA +++ MPM+ N+ ++G + AC+ N+K+GEW AK
Sbjct: 565 KVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQF 624
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
LEP G V++SNIYAS W +V IR MK + K P S
Sbjct: 625 LSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVS 670
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 203/447 (45%), Gaps = 55/447 (12%)
Query: 63 NLLQLNQIYAHIIRTH----------MLHSYS--AAFHWNNIIRLYTRLEAPKKALDIYI 110
NL + Q++ H I+T L SYS AA H + +I Y + P A IY
Sbjct: 55 NLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIH-SFLITSYIKNNCPADAAKIYA 113
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
+M D + +P VLKA C + + +G+++H V+ G + F + I +YS+ G
Sbjct: 114 YMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVG 173
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
AR +FD+ + + SW+ +I + G EA+D+ + +P ++ M+S+T
Sbjct: 174 SLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITH 233
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
L DL+L +H YV + KS + +LIDMY KC + A +VF + + ++
Sbjct: 234 VLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASI 293
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
SWT+MI Y NE + F M G+ PN +T + ++ C G ++ GK H F
Sbjct: 294 ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAF 353
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW------------ 396
++N + + A +D+ G+ G + AR++ + K ++++W
Sbjct: 354 T-LRNGFTLSLVLA--TAFIDMYGKCGDVRSARSVFDSFKSK-DLMMWSAMISSYAQNNC 409
Query: 397 ------------GC-----------LMGACEKFGNVKMGEWVAKHLQELEPWSDGAY-VV 432
GC L+ C K G+++MG+W+ ++ + D
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTS 469
Query: 433 LSNIYASRGLWEEVERIRAVMKHRNLA 459
++YA+ G + R+ A R+++
Sbjct: 470 FVDMYANCGDIDTAHRLFAEATDRDIS 496
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 243/470 (51%), Gaps = 62/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH------------------------------SYSAAF 87
L CT Q+ Q++AHIIR + +Y F
Sbjct: 49 LHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPF 108
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W +IR Y ++ + Y M R GV P +T + KA +++G+Q+H+
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168
Query: 148 VRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN--------------- 191
+ +G S+ + + I LY K G ARKVFDE ER + SW
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 192 ----------------AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
A++ G +Q+GR KEA++ F ++ G E D+VT+ V SAC L
Sbjct: 229 SGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G ++ A + + + ++ ++LIDMY KCG D AYKVF + + NV S++S
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI+GYA +G A+ AL FH M ++ IRPN VTF+G+LSAC H G V++G+ F M+ +
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFF 408
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ P HY CMVDLLGRAG LEEA +V+ MPM+ N +WG L+GAC GN + +
Sbjct: 409 GVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIA 468
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L +LEP G Y++LSNIYAS G WEEV ++R V++ + K P S
Sbjct: 469 ANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 165/470 (35%), Positives = 246/470 (52%), Gaps = 62/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH------------------------------SYSAAF 87
L CT Q+ Q++AHIIR + +Y F
Sbjct: 49 LHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPF 108
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W +IR Y ++ + Y M R GV P +T + KA +++G+Q+H+
Sbjct: 109 LWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQT 168
Query: 148 VRLGLESNE----------FCESGF----------------------ISLYSKAGDFEKA 175
+ +G +++ + + GF I Y+K GD E A
Sbjct: 169 ILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESA 228
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+FD+ P + + +W A++ G +Q+GR KEA++ F ++ G E D+VT+ V SAC L
Sbjct: 229 SGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQL 288
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G ++ A + + + ++ ++LIDMY KCG D AYKVF + + NV S++S
Sbjct: 289 GAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSS 348
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI+GYA +G A+ AL FH M ++ IRPN VTF+G+LSAC H G V++G+ F M+ +
Sbjct: 349 MILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFF 408
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ P HY CMVDLLGRAG LEEA +V+ MPM+ N +WG L+GAC GN + +
Sbjct: 409 GVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIA 468
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L +LEP G Y++LSNIYAS G WEEV ++R V++ + K P S
Sbjct: 469 ANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/439 (36%), Positives = 242/439 (55%), Gaps = 32/439 (7%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLH--------------SYSAAFHW--------------- 89
+ CT++ + Q +A ++RTH+LH S+S ++
Sbjct: 19 THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78
Query: 90 -NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR Y R + P +A+ +Y FM GV D YT P VL A +L A+++GR+ H +
Sbjct: 79 CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVL 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S+ F + I Y G F A VFDE+ R + +WN +I G +++A D
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 209 MFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV-KSKQKSDTLMLNSLI 266
+ + K PD+VTMVS+ AC LG+LE +H Y ++ K + D ++ +L+
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALV 258
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG +DLA +VF + NV +W ++I G A +G +A+ F M + P+ V
Sbjct: 259 DMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDV 318
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+ +L AC H G V EG F+ MKN +QIEPR HYGC+VDLL RA +++A A +E
Sbjct: 319 TFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIEN 378
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP+KAN V+W L+GAC G+ + E + + + ELEP S G YV+LSN+YA W+
Sbjct: 379 MPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHA 438
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R MK++ + K P S
Sbjct: 439 LKLRKQMKNKGIEKTPGCS 457
>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 224/384 (58%), Gaps = 3/384 (0%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN II Y P KAL + M++ V+ D TL L A + +++G+
Sbjct: 159 SDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLC 218
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L V G E N + S IS+Y+K G E AR++FD P+R W ++I+G +Q G++
Sbjct: 219 HALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQS 278
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEAI +F ++ G + DD T+ +V S+CG +G L+L VH Y + K D + N
Sbjct: 279 KEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYC-DIHGLGK-DISVKN 336
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIR 322
SLIDMY KCG + AY +F + + + SWT +I+G+AANGL+ EALD F M E G+
Sbjct: 337 SLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVM 396
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN +TF+GVL++C HGG V++G F M ++Y I PR HYGCMVDLLGRA LL EA
Sbjct: 397 PNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQ 456
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MP+ + V+W L+ AC G V + E+VA+ +Q LEP G V+LS +YA+
Sbjct: 457 FIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSR 516
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W + ++R + K P S
Sbjct: 517 WVDANKVRTGIYSGRKTKQPGCSF 540
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 19/341 (5%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCY 122
LL + ++R +LHS ++R + P +L + R+G +P D Y
Sbjct: 44 LLSYATVSGLLLRVPLLHS---------VLRSLSSGPVPSLSLSFLSLLRRSGYMPIDNY 94
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+L L + ++ ++ +G QLH+L+V+LGL S+ F + I++YS AR V D
Sbjct: 95 SLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSA 154
Query: 183 PE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
P+ SWN IIAG G +A+ F + K DDVT+++ AC +++
Sbjct: 155 PKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKV 214
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
H + V + + + M +SLI MY KCG+++ A ++F + N WTSMI GY
Sbjct: 215 GKLCHALL--VTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGY 272
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
G + EA+ F M+ +G++ + T V+S+C G + G+ + +++ +
Sbjct: 273 TQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYCDIHGLGKD 331
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN----VVIWG 397
+ ++D+ + G +++A + GM + N V+I G
Sbjct: 332 ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMG 372
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 220/376 (58%), Gaps = 2/376 (0%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++IR Y L +L I+ M + +LPD T P VLKA+ QL +G+ +H + ++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
+G + + + + LY A ++FDE PER +WNA+I G + + + +AID
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F G+ G +P + T+V V SAC LG +H++++ ++ + + + +LIDMY
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYH--NRLRLNVFVGTALIDMY 235
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG + KVF EI + NV +W +I GYA NG + AL F M +P+ VTF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVL AC H G V EG+ F MK + ++PR HYGCMVDLLGRAGLLEEA +++ M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ + +IW L+ AC GN K+GE++ K L ELEP + YV+LSNIY+ W EV ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415
Query: 450 RAVMKHRNLAKIPAYS 465
R +M R + K+P S
Sbjct: 416 RGMMNLRGIRKVPGCS 431
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 49/305 (16%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I YT KA+D + M G P T+ +VL A L A G+ +H
Sbjct: 155 AVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHE 214
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L N F + I +Y+K G + KVF+E E+ + +WN +I+G + +G+
Sbjct: 215 FIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDA 274
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F + F+PD+VT + V AC G V + +Q S ++ L
Sbjct: 275 ALQAFSRMLMENFKPDEVTFLGVLCACCHQG------LVTEGRWQFMSMKQQFGL----- 323
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
QP + + M+ GL EAL+ M I P+
Sbjct: 324 ---------------------QPRIEHYGCMVDLLGRAGLLEEALELIQSM---SIEPDP 359
Query: 326 VTFVGVLSACVHGGKVQEGKHFFE--------------MMKNVYQIEPRFAHYGCMVDLL 371
+ + +L AC G + G++ + ++ N+Y E R+A G + ++
Sbjct: 360 IIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMM 419
Query: 372 GRAGL 376
G+
Sbjct: 420 NLRGI 424
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 224/377 (59%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y K+ALD++ M + V PD T+ V+ A Q ++++GRQ+HS
Sbjct: 203 WNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWID 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL SN + I LYSK G+ E A +F + + SWN +I G + KEA+
Sbjct: 263 DHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALL 322
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG ++ +H Y+ + + + + SLIDM
Sbjct: 323 LFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDM 382
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF + +S+ +MI G+A +G AN A D F MR++GI P+ +TF
Sbjct: 383 YAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 442
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+ F M Y+I P+ HYGCM+DLLG GL +EA M+ M
Sbjct: 443 VGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT 502
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A+ L ++EP + G+YV+LSNIYA+ G W EV
Sbjct: 503 MEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVAN 562
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA++ + + K+P S
Sbjct: 563 IRALLNDKGMKKVPGCS 579
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P A+ +Y+ M G+LP+ YT P +LK+ +L + G+Q+H +
Sbjct: 71 WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
+LG E + + + IS+Y K G + E A+K
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE P + + SWNAII+G + G KEA+D+F + K +PD+ TMV+V SAC G
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
++L QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW +MI
Sbjct: 251 IQLGRQVHSWIDD--HGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMI 308
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC G + G+ H + + K +
Sbjct: 309 GGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVY-IDKRIK 367
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + M + N +I+G M
Sbjct: 368 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAM 416
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 155/395 (39%), Gaps = 76/395 (19%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S + + +F+ A VF+ E L WN + G
Sbjct: 19 RIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGH 78
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ AI +++ + G P+ T + +C L + Q+H +V ++ +
Sbjct: 79 ALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYEL-- 136
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY K GR A+KV F EI
Sbjct: 137 DLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP 196
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW ++I GYA G EALD F M ++ ++P+ T V V+SAC G +Q G+
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ 256
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG----- 401
+ + + + ++DL + G +E A + +G+ K +V+ W ++G
Sbjct: 257 VHSWIDD-HGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMIGGYTHL 314
Query: 402 ------------------------------ACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
AC + G + G W+ ++ + A
Sbjct: 315 NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASS 374
Query: 432 V---LSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ L ++YA G E ++ M HR L+ A
Sbjct: 375 LRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNA 409
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 219/377 (58%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+ + KAL+ + M R GV P+ +T VL+A LF L RQLH +
Sbjct: 34 WTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL---RQLHCCII 90
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+S+ F S I +YS+ G+ E A +VFDE L W++IIAG +Q+ EA+
Sbjct: 91 KIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALR 150
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF T+ SV AC L LEL QVH +V K D ++ N+L+DM
Sbjct: 151 LFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVL----KYDQDLILNNALLDM 206
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A VF + + +V SW++MI G A NG + EAL F M+ GI+PN+VT
Sbjct: 207 YCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTI 266
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL AC H G V+EG ++F MK ++ I+P HYGCM+DLLGRAG L EA ++ M
Sbjct: 267 VGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEME 326
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+ AC NV + AK + L+P G YV+LSNIYA+ W +V
Sbjct: 327 CEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAE 386
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M +R + K P S
Sbjct: 387 VRRTMTNRGIKKEPGCS 403
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 9/249 (3%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I++Y K G A+ VFD+ P+R + SW +I+ S +A++ + + + G P+
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPN 65
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
T SV AC L +L Q+H + +K SD + ++LID+Y + G ++ A +V
Sbjct: 66 MFTYSSVLRACDGLFNLR---QLHCCI--IKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F E+ ++ W+S+I G+A N +EAL F M+ +G T VL AC +
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ G+ ++ +V + + ++D+ + G LE+A A+ M K +V+ W ++
Sbjct: 181 ELGR---QVHVHVLKYDQDLILNNALLDMYCKCGSLEDANAVFVRMVEK-DVISWSTMIA 236
Query: 402 ACEKFGNVK 410
+ G K
Sbjct: 237 GLAQNGYSK 245
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 23/152 (15%)
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++N LI+MY K G + A VF ++ NV SWT+MI Y+A L ++AL+ M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG---------CMVDL 370
G+RPN T+ VL AC + + N+ Q+ G ++D+
Sbjct: 61 GVRPNMFTYSSVLRAC-------------DGLFNLRQLHCCIIKIGLDSDVFVRSALIDV 107
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
R G LE A + + M + ++V+W ++
Sbjct: 108 YSRWGELENALRVFDEM-VTGDLVVWSSIIAG 138
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 229/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ AS + ++E+GRQ+HS
Sbjct: 163 WNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIA 222
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I YSK G+ E A +F + + SWN +I G + KEA+
Sbjct: 223 DHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALL 282
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 283 LFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 342
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF + ++ +W +MI G+A +G AN A D F MR++ I+P+ +TF
Sbjct: 343 YSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITF 402
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M + Y+I P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 403 VGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT 462
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYA+ G W EV R
Sbjct: 463 MEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVAR 522
Query: 449 IRAVMKHRNLAKIPAYS 465
IR ++ + + K+P S
Sbjct: 523 IRGLLNDKGMKKVPGCS 539
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 169/349 (48%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P +LK+ +L A + G Q+H +
Sbjct: 31 WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
+LG E + + + IS+Y + G E AR
Sbjct: 91 KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE P + + SWNA+I+G + G KEA+++F + K PD+ TMV+V SA G
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID Y KCG M+ A +F + +V SW +I
Sbjct: 211 IELGRQVHSWI--ADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILI 268
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 269 GGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVY-IDKRLK 327
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + M K+ N +I+G M
Sbjct: 328 GVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM 376
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 134/280 (47%), Gaps = 40/280 (14%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT L K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 257 SYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGR 316
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +YSK GD E A +VF+ + L +WNA+I G +
Sbjct: 317 WIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM 376
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
GRA A D+F ++K +PDD+T V + SAC G L+L +++F+
Sbjct: 377 HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLG----RHIFR--------- 423
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
M YK+ P + + MI +GL EA + M
Sbjct: 424 --------------SMTHNYKI-----TPKLEHYGCMIDLLGHSGLFKEAEEMISTMT-- 462
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+ P+ V + +L AC G V+ G+ F +N+++IEP
Sbjct: 463 -MEPDGVIWCSLLKACKMHGNVELGEKF---AQNLFKIEP 498
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 108/259 (41%), Gaps = 35/259 (13%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A VF+ E L WN + G + A+ +++ + G P+ T + +C
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV------------- 281
L + LQ+H +V +K + D + SLI MY + R++ A+KV
Sbjct: 76 LKASKEGLQIHGHV--LKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYT 133
Query: 282 ------------------FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
F EI +V SW +MI GY G EAL+ F M ++ +RP
Sbjct: 134 ALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRP 193
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ T V V+SA G ++ G+ + + + ++D + G +E A +
Sbjct: 194 DESTMVTVISASARSGSIELGRQVHSWIAD-HGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 384 VEGMPMKANVVIWGCLMGA 402
G+ K +V+ W L+G
Sbjct: 253 FLGLSYK-DVISWNILIGG 270
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 31/163 (19%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-- 335
A VF I +PN+ W +M G+A + AL + M G+ PN TF +L +C
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 336 ---------VHGGKVQEGKHF--------------FEMMKNVYQIEPRFAH-----YGCM 367
+HG ++ G E +++ +++ R +H Y +
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
V G +E AR M + +P+K +VV W ++ + GN K
Sbjct: 136 VTGYASRGYIESARNMFDEIPVK-DVVSWNAMISGYVETGNYK 177
>gi|449461643|ref|XP_004148551.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Cucumis sativus]
Length = 516
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 246/458 (53%), Gaps = 15/458 (3%)
Query: 15 MKSSHPLL----HRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQI 70
+ + H LL H H F H I + D+ + LS NL +
Sbjct: 27 LSTKHQLLSLLNHCSSTNHLFEIHAQILVSGLQNDSFFTTELLRVAALSPSRNLSYGCSL 86
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
H H +SA WN IIR Y+ ++P++A+ ++ M R GV P+ T P +LKA
Sbjct: 87 LFHC------HFHSATMPWNFIIRGYSSSDSPQEAISLFGEMRRRGVRPNNLTFPFLLKA 140
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
L L+ G+Q H++A++ GL+ + + + I Y ARKVFDE ER L SW
Sbjct: 141 CATLATLQEGKQFHAIAIKCGLDLDVYVRNTLIYFYGSCKRMSGARKVFDEMTERTLVSW 200
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
NA+I ++ EAID F+ + GFEPD+ TMV + SAC LG+L L VH V
Sbjct: 201 NAVITACVENFCFDEAIDYFLKMGNHGFEPDETTMVVILSACAELGNLSLGRWVHSQV-- 258
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
V + + + +DMY K G + A VF + Q +V +W++MI+G A +G ANEA+
Sbjct: 259 VGRGMVLNVQLGTAFVDMYAKSGDVGCARHVFNCLKQKSVWTWSAMILGLAQHGFANEAI 318
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F M S I PNHVTF+GVL AC H G V + H+F +M+ VY I+P HYG MVD+
Sbjct: 319 ELFTNMMSSPIVPNHVTFIGVLCACSHAGLVDKSYHYFNLMERVYGIKPMMIHYGSMVDV 378
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC---EKFGNVKMGEWVAKHLQELEPWSD 427
LGRAG ++EA ++ MP++ + ++W L+ AC + G ++ E K L ELEP
Sbjct: 379 LGRAGQVKEAYELIMSMPVEPDPIVWRTLLSACSGRDVNGGAEVAEEARKRLLELEPKRG 438
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G V+++N +A G+W++ R MK R + K+ S
Sbjct: 439 GNVVMVANKFAELGMWKQAADYRRTMKDRGIKKMAGES 476
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 220/376 (58%), Gaps = 2/376 (0%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++IR Y L +L I+ M + +LPD T P VLKA+ QL +G+ +H + ++
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
+G + + + + LY A ++FDE PER +WNA+I G + + + +AID
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F G+ G +P + T+V V SAC LG +H++++ ++ + + + +LIDMY
Sbjct: 178 FRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYH--NRLRLNVFVGTALIDMY 235
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG + KVF EI + NV +W +I GYA NG + AL F M +P+ VTF+
Sbjct: 236 AKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFL 295
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVL AC H G V EG+ F MK + ++PR HYGCMVDLLGRAGLLEEA +++ M +
Sbjct: 296 GVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALELIQSMSI 355
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ + +IW L+ AC GN K+GE++ K L ELEP + YV+LSNIY+ W EV ++
Sbjct: 356 EPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKL 415
Query: 450 RAVMKHRNLAKIPAYS 465
R +M R + K+P S
Sbjct: 416 RGMMSLRGIRKVPGCS 431
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 124/305 (40%), Gaps = 49/305 (16%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I YT KA+D + M G P T+ +VL A L A G+ +H
Sbjct: 155 AVTWNALITGYTHNRKFVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHE 214
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L N F + I +Y+K G + KVF+E E+ + +WN +I+G + +G+
Sbjct: 215 FIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDA 274
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F + F+PD+VT + V AC G V + +Q S ++ L
Sbjct: 275 ALQAFSRMLMENFKPDEVTFLGVLCACCHQG------LVTEGRWQFMSMKQQFGL----- 323
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
QP + + M+ GL EAL+ M I P+
Sbjct: 324 ---------------------QPRIEHYGCMVDLLGRAGLLEEALELIQSM---SIEPDP 359
Query: 326 VTFVGVLSACVHGGKVQEGKHFFE--------------MMKNVYQIEPRFAHYGCMVDLL 371
+ + +L AC G + G++ + ++ N+Y E R+A G + ++
Sbjct: 360 IIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERRWAEVGKLRGMM 419
Query: 372 GRAGL 376
G+
Sbjct: 420 SLRGI 424
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 231/384 (60%), Gaps = 5/384 (1%)
Query: 86 AFHWNNIIRLYTRLEAPK-KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
AF +N +IR Y++ K + Y M R GV P+ +T P VLK + +L +G+ +H
Sbjct: 89 AFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGKCVH 148
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGD--FEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
V+ G E + + I +Y G+ FE A KVFD++P+ +W+A+IAG + G
Sbjct: 149 GCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGC 208
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+ A+D+F ++ G PD++TMVSV SAC LG LEL V YV + K+ KS L
Sbjct: 209 SSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGKWVESYV-EKKNIPKSVEL-C 266
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LIDM+ KCG +D A K+F ++D + SWTS+I G A +G +A+ F M E+GI
Sbjct: 267 NALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGIT 326
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ V F+GVLSAC H G V +G+++F M+ + I P+ HYGCMVDLL R G ++EA
Sbjct: 327 PDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFE 386
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
V+ MP + N +IW ++ AC G +K+GE ++K L + EP + YV+LSNIYA
Sbjct: 387 FVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQ 446
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
WE+ ++R +M R + K+P ++
Sbjct: 447 WEKKTKVREMMDMRGMKKVPGSTM 470
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 17/291 (5%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--------YSKAGDFEK 174
T+ +L + C L Q+H+ ++ GL++N + F S Y+ + F
Sbjct: 19 TILTLLNSHCN--TLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPP 76
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI-GLKKCGFEPDDVTMVSVTSACG 233
+ P +N +I SQ +K +F + + G P+ T V C
Sbjct: 77 SHTTSTPTPSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCA 136
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR--MDLAYKVFWEIDQPNVS 291
+G L L VH V VK + D +LN+LI MY G + A KVF + + +
Sbjct: 137 GIGSLRLGKCVHGCV--VKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTV 194
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+W++MI G+ G ++ A+D F M+ G+ P+ +T V VLSAC G ++ GK + E
Sbjct: 195 TWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGK-WVESY 253
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
I ++D+ + G +++A + M + +V W ++
Sbjct: 254 VEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRT-IVSWTSVIAG 303
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 252/471 (53%), Gaps = 64/471 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH------------------------------SYSAAF 87
L CT++ Q+ Q++AHI R + Y F
Sbjct: 46 LHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPF 105
Query: 88 HWNNIIRLYTRLEAP-KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +IR Y L+ P +++ +Y M R G+ P +T +LKA + +GRQ+H+
Sbjct: 106 LWTALIRGYA-LQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQ 164
Query: 147 AVRLG--------------------------------LESNEFCESGFISLYSKAGDFEK 174
+ +G L+ + + I Y+K G+ E
Sbjct: 165 TILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEA 224
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A ++FD P + + +W A++ G +Q+ R +EA+++F ++ G + D+VT+V V SAC
Sbjct: 225 ASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQ 284
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG + A V Q S+ ++ ++LIDMY KCG ++ AYKVF +++ NV S++
Sbjct: 285 LGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYS 344
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
SMIVG+A +GLA A++ F M ++ I+PN VTF+GVL+AC H G V++G+ F MM+
Sbjct: 345 SMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEEC 404
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ + P HY CMVDLLGRAG LEEA +V+ MPM + +WG L+GAC GN M +
Sbjct: 405 HGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQI 464
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A HL ELEP G Y++LSNIYAS G W++V ++R +M+ + L K P S
Sbjct: 465 AASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 29/240 (12%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQ--------VKSKQKSDTLMLNSLIDMYGKCGRMD 276
+VSV C + ++ QVH ++F+ V +K L+ +D Y +
Sbjct: 42 LVSVLHGCTHINQVK---QVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRL---- 94
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
VF +++ PN WT++I GYA G E++ ++ MR GI P TF +L AC
Sbjct: 95 ----VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACS 150
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
V G+ + ++D+ + G L + + M + +V+ W
Sbjct: 151 AALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISW 209
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYAS----RGLWEEVERIRA 451
L+ A K GN++ A L + P D A+ + YA R E ER++A
Sbjct: 210 TSLIVAYAKVGNME----AASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQA 265
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 238/409 (58%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I + + E ++A+ ++ M + GV+ D L A L + +G+ +HSL++
Sbjct: 344 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 403
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
++G ES ++ I +YSK GD ARK+FDE
Sbjct: 404 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 463
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
PE+ + SW+++I+G +Q+ E + +F ++ GF+PD+ T+VSV SAC L
Sbjct: 464 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 523
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE VH Y+ ++ + ++ +LIDMY KCG ++ A +VF+ + + +S+W ++I
Sbjct: 524 LEQGKWVHAYI--KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI 581
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NGL +LD F M++ + PN +TF+GVL AC H G V EG+H F M + ++I
Sbjct: 582 LGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI 641
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HYGCMVDLLGRAG L+EA ++ MPM +V WG L+GAC+K G+ +MG V +
Sbjct: 642 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGR 701
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL+P DG +V+LSNIYAS+G W++V IR +M + KIP S+
Sbjct: 702 KLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSM 750
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E + + I L+ G +A K+FDE E+ + +W+A+IA Q+ +EAI F+G
Sbjct: 307 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 366
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ K G D+V VS SAC +L + + +H ++ ++ + + N+LI MY KC
Sbjct: 367 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN--LQNALIYMYSKC 424
Query: 273 GRMDLAYKVFWE-------------------------------IDQPNVSSWTSMIVGYA 301
G + +A K+F E + + +V SW+SMI GYA
Sbjct: 425 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 484
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK-NVYQIEPR 360
N L +E L F M+ SG +P+ T V V+SAC +++GK +K N I
Sbjct: 485 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 544
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLMG-----ACEKFGNVK 410
++D+ + G +E A + GM K N +I G M + + F N+K
Sbjct: 545 LG--TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 601
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 146/340 (42%), Gaps = 74/340 (21%)
Query: 94 RLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLAVRLGL 152
R Y + +P A +Y M + D YT P++++A C + E +Q+H+ ++LG
Sbjct: 186 RAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA-CSIRRSEWEAKQVHNHVLKLGF 244
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+S+ + + I+ +S + A +VF+E+ SWN+I+AG + G +EA
Sbjct: 245 DSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEA------ 298
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
K+++ ++ + NS+I ++G
Sbjct: 299 ---------------------------------KHIYHQMPERS--IIASNSMIVLFGMR 323
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A K+F E+ + ++ +W+++I + N + EA+ F M + G+ + V V L
Sbjct: 324 GLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSAL 383
Query: 333 SAC-----------VHGGKVQEGKHFFEMMKN--VY--------QIEPRFAHYGCMVDLL 371
SAC +H ++ G + ++N +Y + + ++DL+
Sbjct: 384 SACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLI 443
Query: 372 G---------RAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ L++ A+A+ + MP K +VV W ++
Sbjct: 444 SWNSMISGYLKCNLVDNAKAIFDSMPEK-DVVSWSSMISG 482
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 81/198 (40%), Gaps = 14/198 (7%)
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
D+ T + AC A QVH +V ++ SD + N+LI+ + C M A +
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFD--SDVYVRNTLINCFSVCSNMTDACR 269
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
VF E + SW S++ GY G EA +H M E I ++ V + G
Sbjct: 270 VFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLF---GMRGLV 326
Query: 341 VQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM---PMKANVVIWG 397
V+ K F EM+ E + ++ + + EEA GM + + V+
Sbjct: 327 VEACKLFDEML------EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAV 380
Query: 398 CLMGACEKFGNVKMGEWV 415
+ AC V MG+ +
Sbjct: 381 SALSACANLLVVNMGKLI 398
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/480 (36%), Positives = 257/480 (53%), Gaps = 73/480 (15%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------ 86
Q+S+C L QI+AH I+T +H AA
Sbjct: 21 QISRCKTTRHLKQIHAHFIKTGQIHHPLAAAELLKFLTLSTQREIKYARKFFSQIHHPNC 80
Query: 87 FHWNNIIRLYTRLEAPK-------KALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALE 138
F WN IIR + +AL + M G++ P+ +T P VLKA +L +E
Sbjct: 81 FSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFPCVLKACAKLARIE 140
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYS------------------------------- 167
G+QLH V+LGL S+EF S + +Y
Sbjct: 141 EGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGNVVLWNVMIDGY 200
Query: 168 -KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
+ GD +R++FD P + + SWN +I+G +Q+G KEAI+MF ++ P+ VT+V
Sbjct: 201 VRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQLGDVPPNYVTLV 260
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI- 285
SV A LG +EL VH +F K++ + D ++ ++LIDMY KCG +D A +VF I
Sbjct: 261 SVLPAVSRLGAIELGKWVH--LFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEGIR 318
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
++ N +W+++I G A +G A +ALD F M+++G+ P+ V ++GVLSAC H G V+EG+
Sbjct: 319 NKKNPITWSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGR 378
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ M N+ + PR HYGCMVDLLGRAG LEEA ++ MP+K + VI L+GAC+
Sbjct: 379 SIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVILKALLGACKM 438
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GN++MGE +AK L P G+YV LSN++AS G WE V ++R MK ++ K P S
Sbjct: 439 HGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKVRLKMKELDIRKDPGCS 498
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 294 bits (752), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 226/377 (59%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I Y K+AL+++ M + V PD T+ VL A Q ++E+GRQ+HS
Sbjct: 203 WNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWIN 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G N + I LYSK G+ E A +F + + SWN +I G + KEA+
Sbjct: 263 DHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALL 322
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G +P+DVTM+S+ SAC LG +++ +H Y+ + + + + SLIDM
Sbjct: 323 LFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 382
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + ++SSW +MI G+A +G AN A D F MR++GI P+ +TF
Sbjct: 383 YAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITF 442
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y++ P+ HYGCM+DL G +GL +EA M+ M
Sbjct: 443 VGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME 502
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYA+ W EV +
Sbjct: 503 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAK 562
Query: 449 IRAVMKHRNLAKIPAYS 465
RA++ + + K+P S
Sbjct: 563 TRALLNDKGMKKVPGCS 579
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 48/353 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P +LK+ + A + G+QLH +
Sbjct: 71 WNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVL 130
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKV------------------------------ 178
+ G + + + + IS+Y + G E A+KV
Sbjct: 131 KFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHK 190
Query: 179 -FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FDE P + + SWNA I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 191 MFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGS 250
Query: 238 LELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+EL QVH ++ F K ++N+LID+Y KCG ++ A +F + +V SW
Sbjct: 251 IELGRQVHSWINDHGFGXNLK------IVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMM 351
++I GY L EAL F M SG +PN VT + +LSAC H G + G+ H + +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVY-ID 363
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
K + + + ++D+ + G +E A+ + + M ++ N +I+G M
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAM 416
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 156/389 (40%), Gaps = 72/389 (18%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S + + F+ A VFD E L WN + G
Sbjct: 19 RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGH 78
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ------- 250
+ A+ +++ + G P+ T + +C + Q+H V +
Sbjct: 79 ALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDL 138
Query: 251 ---------------VKSKQK-------SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
++ QK D + +LI Y G ++ A+K+F EI
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V SW + I GYA G EAL+ F M ++ +RP+ T V VLSAC G ++ G+
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG------- 401
+ N + ++DL + G LE A + +G+ K +V+ W L+G
Sbjct: 259 SWI-NDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGGYTHMNL 316
Query: 402 ----------------------------ACEKFGNVKMGEWVAKHL-QELEPWSDGAYVV 432
AC G + +G W+ ++ + L+ ++ + +
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376
Query: 433 LS--NIYASRGLWEEVERIRAVMKHRNLA 459
S ++YA G E +++ M +R+L+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLS 405
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 238/409 (58%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I + + E ++A+ ++ M + GV+ D L A L + +G+ +HSL++
Sbjct: 209 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
++G ES ++ I +YSK GD ARK+FDE
Sbjct: 269 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 328
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
PE+ + SW+++I+G +Q+ E + +F ++ GF+PD+ T+VSV SAC L
Sbjct: 329 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 388
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE VH Y+ ++ + ++ +LIDMY KCG ++ A +VF+ + + +S+W ++I
Sbjct: 389 LEQGKWVHAYI--KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALI 446
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NGL +LD F M++ + PN +TF+GVL AC H G V EG+H F M + ++I
Sbjct: 447 LGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKI 506
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HYGCMVDLLGRAG L+EA ++ MPM +V WG L+GAC+K G+ +MG V +
Sbjct: 507 QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGR 566
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL+P DG +V+LSNIYAS+G W++V IR +M + KIP S+
Sbjct: 567 KLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSM 615
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 45/299 (15%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E + + I L+ G +A K+FDE E+ + +W+A+IA Q+ +EAI F+G
Sbjct: 172 ERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVG 231
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ K G D+V VS SAC +L + + +H ++ ++ + + N+LI MY KC
Sbjct: 232 MHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYIN--LQNALIYMYSKC 289
Query: 273 GRMDLAYKVFWE-------------------------------IDQPNVSSWTSMIVGYA 301
G + +A K+F E + + +V SW+SMI GYA
Sbjct: 290 GDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYA 349
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK-NVYQIEPR 360
N L +E L F M+ SG +P+ T V V+SAC +++GK +K N I
Sbjct: 350 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 409
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLMG-----ACEKFGNVK 410
++D+ + G +E A + GM K N +I G M + + F N+K
Sbjct: 410 LG--TTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMK 466
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 46/279 (16%)
Query: 71 YAHIIRTHMLHSY---SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
+ HI T + ++ + F WN +IR Y + +P A +Y M + D YT P++
Sbjct: 25 FIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLL 84
Query: 128 LKASCQLFALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
++A C + E +Q+H+ ++LG +S+ + + I+ +S + A +VF+E+
Sbjct: 85 IQA-CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD 143
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
SWN+I+AG + G +EA K
Sbjct: 144 SVSWNSILAGYIEIGNVEEA---------------------------------------K 164
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+++ ++ + NS+I ++G G + A K+F E+ + ++ +W+++I + N +
Sbjct: 165 HIYHQMPERS--IIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMY 222
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
EA+ F M + G+ + V V LSAC + V GK
Sbjct: 223 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGK 261
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 14/246 (5%)
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
+ R++F+ WN +I Q A ++ + D+ T + AC
Sbjct: 29 DYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQAC 88
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
A QVH +V ++ SD + N+LI+ + C M A +VF E + S
Sbjct: 89 SIRRSEWEAKQVHNHVLKLGFD--SDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W S++ GY G EA +H M E I ++ V + G V+ K F EM+
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLF---GMRGLVVEACKLFDEML- 202
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNV 409
E + ++ + + EEA GM + + V+ + AC V
Sbjct: 203 -----EKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVV 257
Query: 410 KMGEWV 415
MG+ +
Sbjct: 258 NMGKLI 263
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 237/418 (56%), Gaps = 14/418 (3%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRL-------YTRLEAPKKALDIYI 110
L C+ + +L Q ++ IIR + A +I+ Y R + + + +Y
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDA---MGRVIKFCAISKSGYLRWQLARNCIFMYS 83
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M V P+ +T P +++A C +A+E G+Q+H+ ++ G ++ F + I +Y
Sbjct: 84 RMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQ 143
Query: 171 DFEKARKVFDENPERKLGS--WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
E+AR+VFD P+R S WNA+IA Q R EA +F ++ D S+
Sbjct: 144 SLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASM 203
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
SAC LG LE +H Y+ KS + D+ + ++IDMY KCG ++ A +VF E+ Q
Sbjct: 204 LSACTGLGALEQGKWIHGYI--EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK 261
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+SSW MI G A +G A++ F M + P+ +TFV VLSAC H G V+EGKH+F
Sbjct: 262 GISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYF 321
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ M V ++P H+GCMVDLLGRAGLLEEAR ++ MP+ + + G L+GAC GN
Sbjct: 322 QYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGN 381
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
++GE + K + ELEP + G YV+L+N+YAS G WE+V ++R +M R + K P +S+
Sbjct: 382 TELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSM 439
>gi|225450622|ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
[Vitis vinifera]
Length = 485
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 247/462 (53%), Gaps = 62/462 (13%)
Query: 66 QLNQIYAHIIRTHMLHSY-------------------SAAFH---------WNNIIRLYT 97
QL QI+AHI+R H+ S + FH +N++I+ Y+
Sbjct: 24 QLPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYS 83
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
+ +L ++ M G+ PD +T +LK+ + IG+ +H + + +G E
Sbjct: 84 LCGPSENSLLLFSQMKNRGIWPDEFTFAPLLKSCSGICDNRIGKGVHGVVIVVGFERFSS 143
Query: 158 CESGFISLYSKAGDFEKARKVFDENPER-------------KLG---------------- 188
G I LY+ G E A+KVFDE +R K+G
Sbjct: 144 IRIGIIDLYTSCGRMEDAKKVFDEMLDRDVIVWNMMIRGFCKVGDIEMGFRLFRQMRDRS 203
Query: 189 --SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
SWN++IAGL Q GR EA+++F + GFEPDD T+V++ C LG +++ +H
Sbjct: 204 VVSWNSMIAGLEQSGRDGEALELFREMWDHGFEPDDATVVTILPVCARLGAVDVGEWIHS 263
Query: 247 YVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
Y S+ D + + NSL+D Y KCG ++ A++VF E+ Q NV SW +MI G NG
Sbjct: 264 YA--ESSRLLRDFISVGNSLVDFYCKCGILETAWRVFNEMPQKNVVSWNAMISGLTFNGK 321
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
D F M G+RPN TFVGVLS C H G V+ G++ F M +++EP+ H+G
Sbjct: 322 GELGADLFEEMINKGVRPNDATFVGVLSCCAHAGLVERGRNLFTSMTVDHKMEPKLEHFG 381
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
CMVDLL R G +EEAR +V MPM+ N V+WG L+ A G+VK E K L ELEPW
Sbjct: 382 CMVDLLARNGCMEEARDLVRTMPMRPNAVLWGSLLSAYRTIGDVKHAECAVKELIELEPW 441
Query: 426 SDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLA 467
+ G YV+LSN+YA G W+EVE++RA+MK +N+ K P S+
Sbjct: 442 NSGNYVLLSNVYAEDGKWDEVEKVRALMKEKNIRKNPGQSMV 483
>gi|297738270|emb|CBI27471.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 250/439 (56%), Gaps = 49/439 (11%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML----------------HSYSAA--------------F 87
L +C+N+ +L QI+ +++T ++ +S S A F
Sbjct: 25 LQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTF 84
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR Y+ + P++AL +Y M V + YT P +LKA + ALE +Q+H+
Sbjct: 85 MWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHI 144
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++G S + + +++YSK+GD + AR +FD+ D R EA+
Sbjct: 145 IKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQ-----------------VDQRDTEAL 187
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F ++ G + D+V +VS AC LG L+ +H Y+ K + + D ++ LID
Sbjct: 188 NLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYI--KKHEIEIDPILGCVLID 245
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG ++ A +VF ++++ VS WT+MI GYA +G EAL+ F M+ +G+ PN +T
Sbjct: 246 MYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMT 305
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F G+L+AC H G V E K FE M+ ++ +P HYGCMVDLLGRAGLL+EA ++E M
Sbjct: 306 FTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENM 365
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+K N IWG L+ AC GN+++G+ + K L +++P G Y+ L++I+A+ G W +
Sbjct: 366 PVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAA 425
Query: 448 RIRAVMKHRNLAKIPAYSL 466
R+R MK + ++K+P S+
Sbjct: 426 RVRRQMKEQGVSKLPGCSV 444
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 31/223 (13%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A VF I +PN W +MI GY+ + EAL +H+M + N TF +L
Sbjct: 66 GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125
Query: 333 SACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP--- 388
AC ++E + ++K + E ++++ ++G ++ AR + + +
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSE--IYTTNSLLNVYSKSGDIKSARLLFDQVDQRD 183
Query: 389 --------------MKANVVIWGCLMGACEKFGNVKMGEW----VAKHLQELEPWSDGAY 430
+K + V + AC G + G+W + KH E++P
Sbjct: 184 TEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILG--- 240
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNL----AKIPAYSLATR 469
VL ++YA G EE + M+ + + A I Y++ R
Sbjct: 241 CVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHGR 283
>gi|225468727|ref|XP_002271484.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 558
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 234/388 (60%), Gaps = 7/388 (1%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
L ++ F +N IIR + M+ AGV PD +T P VLKA +L +
Sbjct: 47 LIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MAMAGVSPDHFTFPFVLKACARL---QT 102
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G LHSL +LG +S+ + ++G I Y G + A KVF+E PER L SW+++IA ++
Sbjct: 103 GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKVFEEMPERDLVSWSSMIACFAK 162
Query: 200 DGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+G EA+ +F ++ G +PD+V ++SV SA LGDLEL + ++ ++ +
Sbjct: 163 NGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFI--SRNGLEFT 220
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ +L+DM+ +CG ++ + +VF E+ + NV +WT++I G A +G + EAL F+ MR
Sbjct: 221 VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRN 280
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
G +P+HVTF GVL AC HGG V EG H FE ++N Y +EP HYGCMVDLLGRAGLL
Sbjct: 281 HGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLN 340
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA V+GMP++ N +IW L+GAC +++ E V + + EL+ + DG YV+LSN+Y
Sbjct: 341 EACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYG 400
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G W E +R M+ + ++K P SL
Sbjct: 401 GVGRWAEKAGVRNSMREKRISKKPGCSL 428
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 230/410 (56%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I Y R P +AL+++ M A V PD T+ + Q+ LE+GR+LH
Sbjct: 194 WNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGF 253
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE-------------------------------KA 175
G+ + + +Y K G E A
Sbjct: 254 VDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDA 313
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKVFDE PER + WNA++ G Q + KEA+ +F +++ PD++TMV++ +AC L
Sbjct: 314 RKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQL 373
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + VH+Y+ K + + SLIDMY KCG ++ A +F EI + N +WT+
Sbjct: 374 GALEMGMWVHRYI--EKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTA 431
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI G A +G ANEA++ F M E G +P+ +TF+GVLSAC H G V+EG+ FF +M+ Y
Sbjct: 432 MICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKY 491
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+E + HY CM+DLLGRAG L+EA +V MPM+ + V+WG + AC GN+ +GE
Sbjct: 492 HLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKA 551
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L E++P G YV+L+N+YA + ++ +++RA+M+H + K+P S
Sbjct: 552 AMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLGVEKVPGCS 601
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 172/344 (50%), Gaps = 46/344 (13%)
Query: 103 KKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
++ L +Y + R+G PD T P +LKA +L G + +RLGL+S+ F +
Sbjct: 106 RRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNA 165
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFE 219
S G E AR++FD +P R L SWN +I G + G EA+++F + +
Sbjct: 166 ATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVR 225
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL-MLNSLIDMYGKCGRMDLA 278
PD+VTM++ S CG + DLEL ++H + V S S T+ ++N+L+DMY KCG +++A
Sbjct: 226 PDEVTMIAAVSGCGQMRDLELGRRLHGF---VDSDGVSCTVRLMNALMDMYIKCGSLEMA 282
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLAN------------------------------- 307
VF I+ V SWT+MIVG+A GL +
Sbjct: 283 KSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCK 342
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHY 364
EAL FH M+E+ + P+ +T V +L+AC G ++ G + E + V+ + A
Sbjct: 343 EALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSV----ALG 398
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
++D+ + G +E+A + + +P K N + W ++ G+
Sbjct: 399 TSLIDMYAKCGNIEKAIHIFKEIPEK-NALTWTAMICGLANHGH 441
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + + K+AL ++ M A V+PD T+ +L A QL ALE+G +H
Sbjct: 326 FPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRY 385
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ L + + I +Y+K G+ EKA +F E PE+ +W A+I GL+ G A EA
Sbjct: 386 IEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEA 445
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-----LALQVHKYVFQVKSKQKSDTLM 261
I+ F + + G +PD++T + V SAC G ++ +L KY + K K S
Sbjct: 446 IEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYS---- 501
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ID+ G+ G +D A ++ + +P+ W ++ G
Sbjct: 502 --CMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQG 543
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 221/383 (57%), Gaps = 33/383 (8%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
VLPD +T VLKA +L + G+ +H L +LG SN F ++ ++LY G+ A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 177 KVFDENPERKLGSWNAIIA-------------------------------GLSQDGRAKE 205
+F++ P+R +WN +IA G Q G+ E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
AID+F+ L+ P++VT+VSV +AC LGDL+L VH+Y KS K + + N+L
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEY--STKSGFKRNVHVCNTL 183
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG ++ A +VF+E+++ V SW++MI G A +G A EAL F M + G++PN
Sbjct: 184 IDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+G+L AC H G + EG+ FF M Y + P+ HYGC+VDL RAGLLEEA +
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP+K N V+WG L+G C+ N+ + E KHL EL+P +DG YVV+SNIYA WE+
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWED 363
Query: 446 VERIRAVMKHRNLAKIPAYSLAT 468
R+R +MK R + K +S T
Sbjct: 364 AARVRKLMKDRGVKKTSGWSSIT 386
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 120/233 (51%), Gaps = 19/233 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + + P +A+D+++ + V P+ T+ VL A L L++GR +H +
Sbjct: 110 WTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYST 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + N + I +Y K G E AR+VF E ER + SW+A+IAGL+ G+A+EA+
Sbjct: 170 KSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALC 229
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-----LALQVHKY--VFQVKSKQKSDTLM 261
+F + K G +P+ VT + + AC +G ++ A Y + Q++
Sbjct: 230 LFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEH-------- 281
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAAN---GLANEAL 310
++D++ + G ++ A++ + +PN W +++ G + LA EA+
Sbjct: 282 YGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAI 334
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 227/380 (59%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+++ Y +L ++A++++ +G PD +L VL A +L LE+GR +
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V G++ N + S IS+YSK G+ +R++FD P R +WNA I+ +Q+G A EAI
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +K+ G +P+ VT+ +V SAC S+G L+L Q+ +Y + D + +LID
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA--THRGLQHDIFVATALID 363
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNH 325
MY KCG ++ A +VF ++ + N +SW +MI A++G A EAL F M + G RPN
Sbjct: 364 MYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFV +LSACVH G V EG F+MM ++ + P+ HY CMVDLL RAG L EA ++E
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP K + V G L AC++ NV +GE V + L EL+P + G Y++ S IY + +W++
Sbjct: 484 KMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDD 543
Query: 446 VERIRAVMKHRNLAKIPAYS 465
R+RA+M+ + K P S
Sbjct: 544 AARMRALMRENGVTKTPGCS 563
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 169/311 (54%), Gaps = 13/311 (4%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
L +Y M + P+ +T P V A L + + R H +LGL+++ + ++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDV 223
+Y + G+ ARKVFDE E+ L SWN++++G ++ G A+EA+++F L+ + GFEPD++
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
++VSV ACG LGDLEL V +V V+ K ++ + ++LI MY KCG + + ++F
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFV--VERGMKVNSYIGSALISMYSKCGELVSSRRIFD 278
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + +W + I YA NG+A+EA+ FH M+E+G+ PN VT VLSAC G +
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 344 GKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
GK E Y H ++D+ + G LE A+ + MP K N W +
Sbjct: 339 GKQMDE-----YATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK-NDASWNAM 392
Query: 400 MGACEKFGNVK 410
+ A G K
Sbjct: 393 ISALASHGKAK 403
>gi|449435366|ref|XP_004135466.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 244/443 (55%), Gaps = 36/443 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYS-----------------------------AAFH 88
L+ CT+L +L QI+A IR H+ S +F
Sbjct: 32 LTDCTDLSKLKQIHAQAIRNFSTHNSSLFLYSRILHVSSLIDFDYACRVFNQIDNPNSFM 91
Query: 89 WNNIIRLYTR-LEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I R L+ ++A++I+ M G V PD +T P +LKA +FAL GRQ H+
Sbjct: 92 WNTLIGACARSLDRKEQAIEIFYRMLEEGSVEPDKHTFPFLLKACAYVFALSEGRQAHAQ 151
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+LGL+ + + + I LY+ G A KVF++ P R L SWN +I Q G + A
Sbjct: 152 IFKLGLDLDVYVGNSLIHLYASCGCLSMALKVFEKMPLRSLVSWNVMIDAYVQSGLFENA 211
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS-KQKSDTLMLNSL 265
+ +F+ ++ FEPD TM S+ SAC +G L L + H YV + S D L+ +SL
Sbjct: 212 LKLFVEMQN-SFEPDGYTMQSIVSACAGIGALSLGMWAHAYVLRKASGAMAGDVLINSSL 270
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPN 324
+DMY KCG + +A +VF + + +++SW SMI+ A +G AL CF + E PN
Sbjct: 271 VDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGRGQAALQCFSRLVEMEKFLPN 330
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTFVGVLSAC HGG V +G+ +F+MM N Y+IEPR HYGC+VDLL R+G ++EA +V
Sbjct: 331 SVTFVGVLSACNHGGMVADGRKYFDMMVNDYKIEPRLEHYGCLVDLLSRSGFIDEALELV 390
Query: 385 EGMPMKANVVIWGCLMGACEK-FGNVKMGEWVA-KHLQELEPWSDGAYVVLSNIYASRGL 442
M +K + VIW L+ AC K V++ E VA K LQ + S G YV+LS +YAS
Sbjct: 391 ANMHIKPDAVIWRSLLDACYKQNAGVELSEEVAFKILQSEKTISSGVYVMLSRVYASARQ 450
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W +V IR VM + K P S
Sbjct: 451 WNDVGIIRKVMTDMGVTKEPGCS 473
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 227/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T VL A ++E+GRQ+HS
Sbjct: 164 WNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVD 223
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G +SN + I LYSK G+ E A +F + + SWN +I G + KEA+
Sbjct: 224 DHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALL 283
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+SV AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 284 LFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 343
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF + ++SSW +MI G+A +G A+ + D F MR+ GI P+ +TF
Sbjct: 344 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITF 403
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y++ P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 404 VGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME 463
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++ E A++L ++EP + +Y++LSNIYAS G WE+V R
Sbjct: 464 MEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVAR 523
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA++ + + K+P S
Sbjct: 524 IRALLNGKCMKKVPGCS 540
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 172/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR + P +L +Y+ M G+LP+ YT P +LK+ + G+Q+H +
Sbjct: 32 WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
+LG + + + + IS+Y + GD A+K
Sbjct: 92 KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE P + + SWNA+I+G ++ G KEA+++F + K PD+ T V+V SAC G
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH +V S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 212 IELGRQVHSWVDD--HGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLI 269
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + VL AC H G + G+ H + + K +
Sbjct: 270 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVY-IDKRLK 328
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + M K+ N +I+G M
Sbjct: 329 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 44/315 (13%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT + K+AL ++ M R+G P+ T+ VL A L A++IGR
Sbjct: 258 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGR 317
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +Y+K GD E A +VF+ + L SWNA+I G +
Sbjct: 318 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
GRA + D+F ++K G EPDD+T V + SAC G L+L +++F+
Sbjct: 378 HGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG----RHIFR--------- 424
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
M YK+ P + + MI +GL EA + + M
Sbjct: 425 --------------SMTQDYKM-----TPKLEHYGCMIDLLGHSGLFKEAEEMINTME-- 463
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLE 378
+ P+ V + +L AC G V+ + F +N+ +IEP + Y + ++ AG E
Sbjct: 464 -MEPDGVIWCSLLKACKMHGNVELAESF---AQNLIKIEPENPSSYILLSNIYASAGRWE 519
Query: 379 EA---RAMVEGMPMK 390
+ RA++ G MK
Sbjct: 520 DVARIRALLNGKCMK 534
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 147/370 (39%), Gaps = 77/370 (20%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A VF+ E WN +I G + ++ +++ + G P+ T + +C
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV------------- 281
Q+H V ++ D + SLI MY + R++ AYKV
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDL--DLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYT 134
Query: 282 ------------------FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
F EI +V SW +MI GYA G EAL+ F M + +RP
Sbjct: 135 ALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRP 194
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ T+V VLSAC H G ++ G+ + + + + ++DL + G +E A +
Sbjct: 195 DESTYVTVLSACAHSGSIELGRQVHSWVDD-HGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 384 VEGMPMKANVVIWGCLMG-----------------------------------ACEKFGN 408
+G+ K +V+ W L+G AC G
Sbjct: 254 FQGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 409 VKMGEWVAKHL-QELEPWSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNL----AKI 461
+ +G W+ ++ + L+ ++ + + S ++YA G E ++ M H++L A I
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372
Query: 462 PAYSLATRLD 471
+++ R D
Sbjct: 373 FGFAMHGRAD 382
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 234/409 (57%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + ++AL ++I M+ G+ D + VL A L ++ G+ +H L +
Sbjct: 272 WSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVI 331
Query: 149 RLGLESNEFCESGFISLYS-------------------------------KAGDFEKARK 177
R+G+ES ++ I +YS K G EKAR
Sbjct: 332 RMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARA 391
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD PE+ + SW+A+I+G +Q E + +F ++ PD+ +VSV SAC L
Sbjct: 392 LFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAA 451
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ VH Y+ K+ K + ++ +L+DMY KCG ++ A +VF +++ VSSW ++I
Sbjct: 452 LDQGKWVHAYIR--KNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALI 509
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NGL +LD F M+ +G+ PN +TF+GVL AC H G V EG+ F M + I
Sbjct: 510 IGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGI 569
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HYGCMVDLLGRAGLL EA ++E MPM +V WG L+GAC+K G+ +MGE V +
Sbjct: 570 EPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGR 629
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL+P DG +V+LSNI+AS+G WE+V +R +MK + + K P SL
Sbjct: 630 KLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSL 678
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 196/429 (45%), Gaps = 93/429 (21%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA--- 86
TF+ +T+S I+ T L C NL Q N+I + +I T + AA
Sbjct: 34 TFKPTITLS--------------ILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRL 79
Query: 87 ---------------------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
F WN ++R Y + + +KAL +Y M + V P
Sbjct: 80 LKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGP 139
Query: 120 DCYTLPIVLKASCQLFALEIG-RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D YT P+V++A C + LE G +++H +++G +S+ + ++ I++Y+ G+ ARK+
Sbjct: 140 DNYTYPLVVQA-CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE+P SWN+I+AG + G +EA
Sbjct: 199 FDESPVLDSVSWNSILAGYVKKGDVEEA-------------------------------- 226
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
K +F ++ + + NS+I + GK G++ A+K+F E+D+ ++ SW+++I
Sbjct: 227 -------KLIFDQMPQR--NIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALIS 277
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY NG+ EAL F M +G+R + V V VLSAC H V+ GK ++ + IE
Sbjct: 278 GYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRM-GIE 336
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
++ + +G + +A+ + G + + W ++ C K G+V+ A+
Sbjct: 337 SYVNLQNALIHMYSGSGEIMDAQKLFNG-SHNLDQISWNSMISGCMKCGSVEK----ARA 391
Query: 419 LQELEPWSD 427
L ++ P D
Sbjct: 392 LFDVMPEKD 400
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 174/510 (34%), Positives = 259/510 (50%), Gaps = 82/510 (16%)
Query: 36 TISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS------------- 82
TI + L+ P I++ + C L Q++A I+T +
Sbjct: 4 TIYNPNRTLNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAF 63
Query: 83 ------YSAA----------FHWNNIIRLYTRLEAP---KKALDIYIFMSRAG-VLPDCY 122
Y+ A F WN I+R+ +AL ++ M G V P+ +
Sbjct: 64 SSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS--------------- 167
T P VLKA + L G+Q+H L V+ G +EF S + +Y
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 168 --------------------------------KAGDFEKARKVFDENPERKLGSWNAIIA 195
+ GD + A+ +FDE P R + SWN +I+
Sbjct: 184 VVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMIS 243
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +Q+G EAI++F ++ +P+ VT+VSV A +G LEL +H Y K+K
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAG--KNKV 301
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D ++ ++L+DMY KCG +D A +VF + + N +W+++I +A +G A +A+ FH
Sbjct: 302 EIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHL 361
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M ++G+ PN V ++G+LSAC H G V+EG+ FF M V ++PR HYGCMVDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LEEA ++ MP++ + VIW L+GAC+ N+KMGE VA+ L EL P G+YV LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+YAS G WE V R+R MK ++ K P S
Sbjct: 482 LYASLGNWEAVARVRLKMKGMDIRKDPGCS 511
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 228/409 (55%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y ++ +++ +++ M VLP TL +VL A +L L G+++HS
Sbjct: 187 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 246
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA-------------------------------RK 177
+ESN E+ I +Y+ G+ + A R
Sbjct: 247 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 306
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ PE+ SW A+I G + R KEA+++F ++ +PD+ TMVSV +AC LG
Sbjct: 307 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 366
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL + Y+ ++K K+D + N+LIDMY KCG +D A +F E+ Q + +WT+MI
Sbjct: 367 LELGEWIRTYI--DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 424
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
VG A NG +ALD F M ++ I P+ +T++GVLSAC H G V +G+ +F M + + I
Sbjct: 425 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGI 484
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP AHYGC+VDLL RAG L+EA ++E MP+KAN ++WG L+ C + M E V K
Sbjct: 485 EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 544
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ ELEP + YV+L NIYA+ W ++ +R +M + + K P SL
Sbjct: 545 QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSL 593
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 198/417 (47%), Gaps = 64/417 (15%)
Query: 35 VTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIR------------------ 76
TI+A SS L + P + + L C ++ QL Q++ I+
Sbjct: 2 TTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCC 61
Query: 77 THMLHSYSAA------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
TH + A F WN +IR Y+RL+ P+ + +Y+ M R GV PD YT
Sbjct: 62 THEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTF 121
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
P + K + ALE GRQLH ++ GL+ N F + + +Y G + AR VFD P+
Sbjct: 122 PFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK 181
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
+ +WN II+ ++ G+ +E+ +F+ ++ P VT+V V SAC L DL +V
Sbjct: 182 ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 241
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W----------- 283
H YV K +S+ ++ N++IDMY CG MD A +F W
Sbjct: 242 HSYVKNCKV--ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLG 299
Query: 284 EID----------QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
EID + + SWT+MI GY + EAL+ F M+ + ++P+ T V VL+
Sbjct: 300 EIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLT 359
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
AC H G ++ G+ + + +I+ ++D+ + G +++A ++ M +
Sbjct: 360 ACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR 415
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENP 183
I L +C+ +++ +Q+H A++ GL +N ++ ++ + GDF+ AR++FDE P
Sbjct: 22 ISLLETCE--SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 79
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
E L WN +I G S+ + + +++ + + G +PD T + LE Q
Sbjct: 80 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 139
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H +V +K + + + +L+ MY CG++D A VF + +V +W +I Y
Sbjct: 140 LHGHV--LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 197
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G E+ F M + + P VT V VLSAC ++ GK +KN ++E
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC-KVESNLVL 256
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
M+D+ G ++ A + M + +++ W ++ G + +
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDVA 304
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/404 (37%), Positives = 233/404 (57%), Gaps = 9/404 (2%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
QL ++ H + + + + WN II ++R P K++D+++ M PD +TLP
Sbjct: 55 QLGKLSPHSLSVFLHMPHRNIYSWNIIIGEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLP 114
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
+VL+A ++++G +H L V +G+E + F S + +Y G AR +FDE PER
Sbjct: 115 LVLRACAASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFGKVLDARVLFDEMPER 174
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
W A++AG +Q A+ +F + G D V M+S+ ACG LG L+ VH
Sbjct: 175 DAVLWTAMLAGYAQHEEPMLALSVFRQMVSAGVALDGVVMISLLLACGQLGWLKHGKSVH 234
Query: 246 KYVFQVKSKQKSDTLMLN---SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
++ ++ L LN +L+ Y KC + +Y +F ++ + +V SW+S+I+GY
Sbjct: 235 GWI-----TRRCLALGLNLGNALVYFYVKCAALGYSYNLFDKMPERDVISWSSIILGYGL 289
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+G + ALD F MR +G++PN VTF+G LSAC H G V+ +FEMMK Y + P
Sbjct: 290 SGNVDIALDLFDRMRVAGVKPNDVTFLGALSACTHTGMVERAHTYFEMMKE-YGVAPELK 348
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
HY CMVD LGRAG+LE+A +E MP++A+ + G L+G C GN ++GE VAK L L
Sbjct: 349 HYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGALLGGCRVHGNAEVGERVAKKLMGL 408
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
EP YV+L+NIYA G +E+ E++R +MK R L+K+P S
Sbjct: 409 EPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQRKLSKVPGCSF 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 3/206 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK-ARKVFDENPERKLGSWNAIIAGLSQ 199
R LH+ +R L N S + +YS+ G + VF P R + SWN II S+
Sbjct: 28 RHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHSLSVFLHMPHRNIYSWNIIIGEFSR 87
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
++ID+F+ ++ PD T+ V AC + G ++L + VH V+ +
Sbjct: 88 SHLPHKSIDLFLQMRHFNQPPDVFTLPLVLRACAASGSVKLGVSVHGLC--VEMGMEKSL 145
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ ++L+ MY G++ A +F E+ + + WT+M+ GYA + AL F M +
Sbjct: 146 FVASALVFMYVTFGKVLDARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMVSA 205
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK 345
G+ + V + +L AC G ++ GK
Sbjct: 206 GVALDGVVMISLLLACGQLGWLKHGK 231
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/385 (39%), Positives = 224/385 (58%), Gaps = 33/385 (8%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M GV P+ +TL V+KA + +LE G+Q H+ +++G ES+ ++ + +Y++ G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 172 FEKARKVFD-------------------------------ENPERKLGSWNAIIAGLSQD 200
E A VFD E ER + SW A+IAG +Q+
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G E++++F ++K G + D M SV SAC L LEL Q H YV V+S D +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYV--VQSGFALDIV 178
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++L+DMY K G M+ A +VF ++ Q N SW S+I G A +G N+A+ F M ++G
Sbjct: 179 VGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
I+PN ++FVGVLSAC H G V EG+ +F +M Y I P +HY CM+DLLGRAG L+EA
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ GMP++ +V +WG L+GAC GN ++ + +A+HL +E G YV+LSNIYA+
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++ ++R +MK R + K P YS
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYS 383
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 112/213 (52%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + ++L+++ M + G+ D + + VL A L ALE+GRQ H+ V
Sbjct: 110 WTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVV 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + S + +Y+K+G E A +VFD+ P+R SWN+II G +Q GR +A+
Sbjct: 170 QSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVL 229
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNSL 265
+F + + G +P++++ V V SAC G L + Y F + ++ D +
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTG---LVNEGRGY-FNLMTQNYGIVPDVSHYTCM 285
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
ID+ G+ G +D A + +P+VS W +++
Sbjct: 286 IDLLGRAGCLDEAENFINGMPVEPDVSVWGALL 318
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/482 (34%), Positives = 260/482 (53%), Gaps = 75/482 (15%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH---------------------SYSAA---FH----- 88
+ +C NL +L + + I+++ LH S+S A FH
Sbjct: 25 IEQCKNLRELKKTHTQILKSPTLHTGDQYYLITRLLYVCSFSYYGSFSYATNVFHMIKNP 84
Query: 89 ----WNNIIRLYTRLEAPK-----KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+N +IR Y +E+ KAL +Y M ++P+C T P +LK Q
Sbjct: 85 DLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGAT 144
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN----------------- 182
G+ +H+ ++ G + + + ISLY G ARKVFDE
Sbjct: 145 GQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLR 204
Query: 183 --------------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG---FEPDDVTM 225
R + +WN+II GL+Q G AKE++++F ++ +PD +T+
Sbjct: 205 NGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITI 264
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
SV SAC LG ++ VH Y+ ++ + D ++ +L++MYGKCG + A+++F E+
Sbjct: 265 ASVLSACAQLGAIDHGKWVHGYL--RRNGIECDVVIGTALVNMYGKCGDVQKAFEIFEEM 322
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ + S+WT MI +A +GL +A +CF M ++G++PNHVTFVG+LSAC H G V++G+
Sbjct: 323 PEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGR 382
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F++MK VY IEP+ HY CMVD+L RA L +E+ ++ MPMK +V +WG L+G C+
Sbjct: 383 WCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVYVWGALLGGCQM 442
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL-AKIPAY 464
GNV++GE V HL +LEP + YV +IYA G+++ +RIR +MK + + KIP
Sbjct: 443 HGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGC 502
Query: 465 SL 466
S+
Sbjct: 503 SM 504
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 165/469 (35%), Positives = 259/469 (55%), Gaps = 48/469 (10%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNII 93
H +S + D + A I SKC ++ ++++ +I +++ WN++I
Sbjct: 170 HALVSKSRYSTDVYMGSALI--DMYSKCGSVACAEEVFSGMIERNLVT-------WNSLI 220
Query: 94 RLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV----- 148
Y + +AL++++ M +G+ PD TL V+ A L AL+ G Q+H+ V
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280
Query: 149 ----------------------------RLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
R+ + N E+ +S Y++A + AR +F
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR-NVVSETSMVSGYARAASVKAARFMFS 339
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ +R + SWNA+IAG +Q+G +EA+ +F LK+ P T ++ SAC +L DL L
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLL 399
Query: 241 ALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
Q H +V F+ +S +SD + NSLIDMY KCG ++ +VF ++ + + SW ++
Sbjct: 400 GRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAI 459
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
IVGYA NG EAL F M G +P+HVT +GVL AC H G V+EG+H+F M+ +
Sbjct: 460 IVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HG 518
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ P HY CMVDLLGRAG L EA+ ++E MP+ + V+WG L+ AC+ GN++MG+ A
Sbjct: 519 LIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAA 578
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L E++PW+ G YV+LSN+YA G W +V R+R +M+ + + K P S
Sbjct: 579 EKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 627
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 38/348 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + + +++L+ ++ M R L + Y+ L A L L +G Q+H+L
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + S I +YSK G A +VF ER L +WN++I Q+G A EA++
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + G EPD+VT+ SV SAC SL L+ LQ+H V + +K + D ++ N+L+DM
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKT-NKFRDDLVLGNALVDM 293
Query: 269 YGKCGRMDLAYKV-------------------------------FWEIDQPNVSSWTSMI 297
Y KC +++ A +V F ++ Q NV SW ++I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-FFEMMKNVYQ 356
GY NG EAL F ++ I P H TF +LSAC + + G+ ++K ++
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413
Query: 357 I----EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G +E+ + E M + + V W ++
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER-DCVSWNAII 460
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 6/306 (1%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + IS+ +K+G ++A ++F PE SWN++++G +Q R +E+++ F+
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ + F ++ + S SAC L DL + QVH V KS+ +D M ++LIDMY KC
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV--SKSRYSTDVYMGSALIDMYSKC 195
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A +VF + + N+ +W S+I Y NG A+EAL+ F M +SG+ P+ VT V+
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC ++EG + + +VD+ + + EAR + + M ++ N
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR-N 314
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
VV ++ + +VK ++ + + S A + Y G EE R+ +
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA---GYTQNGENEEALRLFRL 371
Query: 453 MKHRNL 458
+K ++
Sbjct: 372 LKRESI 377
>gi|297743898|emb|CBI36868.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/399 (39%), Positives = 228/399 (57%), Gaps = 13/399 (3%)
Query: 78 HMLHSYSAAFHWNNIIRLYTRLEAPKKA-----LDIYIFMSRAGVLPDCYTLPIVLKASC 132
H H +F WN +IR + + A + I++ M GV PD +T P +L++
Sbjct: 16 HFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFA 75
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
L +GR +H+ +R GL + F ++ IS+YS +G + AR +F PER + SW+
Sbjct: 76 SPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSSGLVDMARNLFAVMPERNVISWSC 135
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGF---EPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
+I G + G+ KEA+ +F ++ G P++ TM V +ACG LG LE H Y+
Sbjct: 136 MINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYI- 194
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN--VSSWTSMIVGYAANGLAN 307
K D ++ +LIDMY KCG ++ A VF + PN V +W++MI G A +GLA
Sbjct: 195 -DKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLG-PNKDVMAWSAMISGLAMHGLAE 252
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
E + F M G+RPN VTF+ V ACVHGG V EGK + M Y I P HYGCM
Sbjct: 253 ECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCM 312
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDL GRAG ++EA +V+ MPM+ +V++WG L+ G+++ E K L ELEP +
Sbjct: 313 VDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKKLIELEPTNS 372
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
GAYV+LSN+YA RG WE+V +R +M+ + K+P SL
Sbjct: 373 GAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVPGCSL 411
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 248/443 (55%), Gaps = 37/443 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSY----------------------------SAAFHW 89
L C N+++L +I+AHI++ + S AF +
Sbjct: 66 LKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLY 125
Query: 90 NNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
N +IR Y + A+ +Y M + PD +T P V+K+ L ++G+Q+H
Sbjct: 126 NAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVH 185
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK--LGSWNAIIAGLSQDGR 202
+ G +SN E+ + +Y K + A +VF+E ER + SW AI++G ++ G
Sbjct: 186 GHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGC 245
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+A++ F ++ G EPD++++VSV C LG LEL +H ++ K+ + +
Sbjct: 246 YADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIH--IYADKAGFLRNICVC 303
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LI+MY KCG +D ++F ++ + +V SW++MIVG A +G A EA++ F M+++ I
Sbjct: 304 NALIEMYAKCGSIDQGRRLFDQMKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIE 363
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ +TFVG+L+AC H G + EG +FE MK Y IEP HYGC+V+LLG +G L++A
Sbjct: 364 PSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALE 423
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+V+ MP K + IWG L+ +C GN+K+ +HL ELEP G YV+LSN+YA G
Sbjct: 424 LVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGK 483
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+ V R+R +M+ +++ K P S
Sbjct: 484 WDGVSRMRKLMRSKSMKKTPGCS 506
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 228/409 (55%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y ++ +++ +++ M VLP TL +VL A +L L G+++HS
Sbjct: 208 WNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVK 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA-------------------------------RK 177
+ESN E+ I +Y+ G+ + A R
Sbjct: 268 NCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARN 327
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ PE+ SW A+I G + R KEA+++F ++ +PD+ TMVSV +AC LG
Sbjct: 328 YFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGA 387
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL + Y+ ++K K+D + N+LIDMY KCG +D A +F E+ Q + +WT+MI
Sbjct: 388 LELGEWIRTYI--DRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMI 445
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
VG A NG +ALD F M ++ I P+ +T++GVLSAC H G V +G+ +F M + + I
Sbjct: 446 VGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGI 505
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP AHYGC+VDLL RAG L+EA ++E MP+KAN ++WG L+ C + M E V K
Sbjct: 506 EPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVK 565
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ ELEP + YV+L NIYA+ W ++ +R +M + + K P SL
Sbjct: 566 QILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSL 614
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 200/420 (47%), Gaps = 64/420 (15%)
Query: 32 RKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIR--------------- 76
++ TI+A SS L + P + + L C ++ QL Q++ I+
Sbjct: 20 KQMTTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMT 79
Query: 77 ---THMLHSYSAA------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC 121
TH + A F WN +IR Y+RL+ P+ + +Y+ M R GV PD
Sbjct: 80 FCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDR 139
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
YT P + K + ALE GRQLH ++ GL+ N F + + +Y G + AR VFD
Sbjct: 140 YTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDV 199
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P+ + +WN II+ ++ G+ +E+ +F+ ++ P VT+V V SAC L DL
Sbjct: 200 CPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG 259
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W-------- 283
+VH YV K +S+ ++ N++IDMY CG MD A +F W
Sbjct: 260 KKVHSYVKNCKV--ESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFT 317
Query: 284 ---EID----------QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
EID + + SWT+MI GY + EAL+ F M+ + ++P+ T V
Sbjct: 318 NLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVS 377
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
VL+AC H G ++ G+ + + +I+ ++D+ + G +++A ++ M +
Sbjct: 378 VLTACAHLGALELGE-WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQR 436
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENP 183
I L +C+ +++ +Q+H A++ GL +N ++ ++ + GDF+ AR++FDE P
Sbjct: 43 ISLLETCE--SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP 100
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
E L WN +I G S+ + + +++ + + G +PD T + LE Q
Sbjct: 101 EPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQ 160
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H +V +K + + + +L+ MY CG++D A VF + +V +W +I Y
Sbjct: 161 LHGHV--LKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKV 218
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G E+ F M + + P VT V VLSAC ++ GK +KN ++E
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNC-KVESNLVL 277
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
M+D+ G ++ A + M + +++ W ++ G + +
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNR-DIISWTTIVSGFTNLGEIDVA 325
>gi|147806246|emb|CAN72195.1| hypothetical protein VITISV_014979 [Vitis vinifera]
Length = 558
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/388 (40%), Positives = 233/388 (60%), Gaps = 7/388 (1%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
L ++ F +N IIR + M+ AGV PD +T P VLKA +L +
Sbjct: 47 LIAFPDTFAFNTIIRAHADSSPSFSLSLFSK-MTMAGVSPDHFTFPFVLKACARL---QT 102
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G LHSL +LG +S+ + ++G I Y G + A K F+E PER L SW+++IA ++
Sbjct: 103 GLDLHSLLFKLGFDSDVYVQNGLIHFYGCCGFLDFALKAFEEMPERDLVSWSSMIACFAK 162
Query: 200 DGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+G EA+ +F ++ G +PD+V ++SV SA LGDLEL + ++ ++ +
Sbjct: 163 NGFGYEALALFQRMQLVGTVKPDEVIVLSVVSAISILGDLELGKWIRGFI--SRNGLEFT 220
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ +L+DM+ +CG ++ + +VF E+ + NV +WT++I G A +G + EAL F+ MR
Sbjct: 221 VSLGTALVDMFSRCGCIEESMRVFDEMGERNVLTWTALINGLAVHGRSAEALRMFYEMRN 280
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
G +P+HVTF GVL AC HGG V EG H FE ++N Y +EP HYGCMVDLLGRAGLL
Sbjct: 281 HGFQPDHVTFTGVLVACSHGGLVSEGWHVFESIRNEYGMEPLPEHYGCMVDLLGRAGLLN 340
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA V+GMP++ N +IW L+GAC +++ E V + + EL+ + DG YV+LSN+Y
Sbjct: 341 EACKFVDGMPIRPNSIIWRTLLGACVNHNYIELAEKVKEKINELDSYHDGDYVLLSNVYG 400
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G W E +R M+ + ++K P SL
Sbjct: 401 GVGRWAEKAGVRNSMREKRISKKPGCSL 428
>gi|225457409|ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
[Vitis vinifera]
Length = 643
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/440 (36%), Positives = 244/440 (55%), Gaps = 34/440 (7%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSY---------------------SAAF--------- 87
+ C+ L QI+AHIIRT ++ ++ S F
Sbjct: 75 IKSCSKKTHLLQIHAHIIRTSLIQNHFISLQFLSRAALSPSRDMGYSSQVFSQIMKPSGS 134
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+N +IR Y+ +P++ +Y M R GV P+ + V+K+ ++ +L G Q+H+
Sbjct: 135 QYNVMIRAYSMSHSPEQGFYLYREMRRRGVPPNPLSSSFVMKSCIRISSLMGGLQIHARI 194
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+R G +S+ + + LYS FE+A KVFDE P+ SWN +I+ + R ++A+
Sbjct: 195 LRDGHQSDNLLLTTLMDLYSCCDKFEEACKVFDEIPQWDTVSWNVLISCCIHNRRTRDAL 254
Query: 208 DMFIGLKKC--GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
MF ++ GFEPDDVT + + AC +LG LE +VH Y+ + + + NSL
Sbjct: 255 RMFDIMQSTADGFEPDDVTCLLLLQACANLGALEFGERVHNYIEEHGYDGALN--LCNSL 312
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY +CGR++ AY +F +D+ NV SW++MI G+A +G EA++ F M++ G+ P+
Sbjct: 313 ITMYSRCGRLEKAYSIFKRMDERNVVSWSAMISGFAMHGYGREAIEAFEQMQQLGVSPDD 372
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T GVLSAC H G V +G FF+ M V+ IEP HYGCMVDLLGRAGLL++A ++
Sbjct: 373 QTLTGVLSACSHCGLVDDGLMFFDRMSKVFGIEPNIHHYGCMVDLLGRAGLLDQAYQLIM 432
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M +K + +W L+GAC + +GE V HL EL+ G YV+L NIY+S G W++
Sbjct: 433 SMVIKPDSTLWRTLLGACRIHRHATLGERVIGHLIELKAQEAGDYVLLLNIYSSVGNWDK 492
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R MK + + P S
Sbjct: 493 VTDLRKFMKEKGIQTSPGCS 512
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 227/380 (59%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+++ Y +L ++A++++ +G PD +L VL A +L LE+GR +
Sbjct: 186 WNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 245
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V G++ N + S IS+YSK G+ +R++FD P R +WNA I+ +Q+G A EAI
Sbjct: 246 VERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAI 305
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +K+ G +P+ VT+ +V SAC S+G L+L Q+ +Y + D + +LID
Sbjct: 306 SLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA--THRGLQHDIFVATALID 363
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNH 325
MY KCG ++ A +VF ++ + N +SW +MI A++G A EAL F M + G RPN
Sbjct: 364 MYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPND 423
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFV +LSACVH G V EG F+MM ++ + P+ HY CMVDLL RAG L EA ++E
Sbjct: 424 ITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP K + V G L AC++ NV +GE V + L EL+P + G Y++ S IY + +W++
Sbjct: 484 KMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDD 543
Query: 446 VERIRAVMKHRNLAKIPAYS 465
R+RA+M+ + K P S
Sbjct: 544 AARMRALMRENGVTKTPGCS 563
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 169/311 (54%), Gaps = 13/311 (4%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
L +Y M + P+ +T P V A L + + R H +LGL+++ + ++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDV 223
+Y + G+ ARKVFDE E+ L SWN++++G ++ G A+EA+++F L+ + GFEPD++
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
++VSV ACG LGDLEL V +V V+ K ++ + ++LI MY KCG + + ++F
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFV--VERGMKVNSYIGSALISMYSKCGELVSSRRIFD 278
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + +W + I YA NG+A+EA+ FH M+E+G+ PN VT VLSAC G +
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDL 338
Query: 344 GKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
GK E Y H ++D+ + G LE A+ + MP K N W +
Sbjct: 339 GKQMDE-----YATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRK-NDASWNAM 392
Query: 400 MGACEKFGNVK 410
+ A G K
Sbjct: 393 ISALASHGKAK 403
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 227/377 (60%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL+++ M + V PD T+ VL +E+GRQ+HS
Sbjct: 178 WNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWID 237
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E+A +F+ + + SWN +I G + KEA+
Sbjct: 238 NHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALL 297
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G P+DVTM+S+ AC LG +++ +H Y+ + ++T + SLIDM
Sbjct: 298 VFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDM 357
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF I ++SS +MI G+A +G A+ A D M++ GI P+ +TF
Sbjct: 358 YAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITF 417
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G G+ F+ M Y+IEP+ HYGCM+DLLGR+GL +EA ++ M
Sbjct: 418 VGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT 477
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIWG L+ AC+ N+++GE +A+ L ++EP + G+YV+LSNIYA+ W++V R
Sbjct: 478 MEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVAR 537
Query: 449 IRAVMKHRNLAKIPAYS 465
+R ++ + L K+P S
Sbjct: 538 VRTLLNDKGLKKVPGCS 554
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 180/349 (51%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR + P AL++Y++M G+ P+ YT P + K+ + A + G+Q+H+ +
Sbjct: 46 WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQIL 105
Query: 149 RLGLESNEFCESGFISLYSKA-------------------------------GDFEKARK 177
+ GL + + IS+Y++ G+ +KA+K
Sbjct: 106 KYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQK 165
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE P + + SWNA+I+G ++ GR KEA+++F + K +PD+ TM +V S C G+
Sbjct: 166 MFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGN 225
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL Q+H ++ S+ ++N+LID+Y KCG M+ A+ +F + +V SW ++I
Sbjct: 226 VELGRQIHSWIDN--HGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLI 283
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GYA EAL F M + G PN VT + +L AC H G + G+ H + + K +
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKKLK 342
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
I + ++D+ + G +E A + + + K+ N +I+G M
Sbjct: 343 GIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM 391
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN SW +MI G+A + AL+ + YM G+ PN TF + +C
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL---------LGRAGLLEEARAMVEGMP 388
QEGK QI + YG VDL + G++E+A + +
Sbjct: 91 SKAAQEGK----------QIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSS 140
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE-VE 447
+ +VV + ++ GN+ + K E+ ++ + + YA G ++E +E
Sbjct: 141 HR-DVVSYTAMITGYASRGNMDKAQ---KMFDEIPIKDVVSWNAMISGYAEIGRYKEALE 196
Query: 448 RIRAVMK 454
+MK
Sbjct: 197 LFNEMMK 203
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 229/381 (60%), Gaps = 4/381 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y ++AL+++ M R V PD TL V+ A Q ++E+GRQ+HS
Sbjct: 164 WNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVD 223
Query: 149 RL----GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
G S+ + I LYSK GD E A +F+ + + SWN +I G + K
Sbjct: 224 DDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK 283
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F + + G P+DVT++SV AC LG +++ +H Y+ + ++T + S
Sbjct: 284 EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG ++ A++VF + ++SSW +MI G+A +G AN A D F MR + + P+
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPD 403
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TFVG+LSAC H G + G+ F+ M Y + P+ HYGCM+DLLG +GL +EA M+
Sbjct: 404 DITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMI 463
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MPM+ + VIW L+ AC+K GN+++ E A+ L ++EP + G+YV+LSNIYA+ G WE
Sbjct: 464 HTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWE 523
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
+V R+R V+ + + K+P S
Sbjct: 524 DVARVRGVLNGKGMKKVPGCS 544
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 177/351 (50%), Gaps = 40/351 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++R + P AL++Y+ M G LP+ Y+ P +LK+ + A E GRQ+H+ +
Sbjct: 32 WNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVL 91
Query: 149 RLGLESNEFCESGFISLYSKAG-------------------------------DFEKARK 177
+LG + + + IS+Y++ G DF ARK
Sbjct: 92 KLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDFRSARK 151
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VFDE ER + SWNA+I G ++GR +EA+++F + + PD+ T+VSV SAC G
Sbjct: 152 VFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGS 211
Query: 238 LELALQVHKYVFQVKSKQ--KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
+EL QVH +V S ++N+LID+Y KCG ++ A+ +F + +V SW +
Sbjct: 212 IELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNT 271
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKN 353
+I GY L EAL F M SG PN VT + VL AC H G + G+ H + + K
Sbjct: 272 LIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVY-IDKK 330
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + + ++D+ + G +E A + M ++ N +I+G M
Sbjct: 331 LKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAM 381
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 33/260 (12%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A VF+ E L WN ++ G + A++M++ + G P+ + + +C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 235 LGDLELALQVHKYVFQV-----------------------------KSKQKSDTLMLNSL 265
E Q+H V ++ + D + +L
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I Y G A KVF EI + +V SW +MI GY NG EAL+ F M + +RP+
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 326 VTFVGVLSACVHGGKVQEGKH---FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
T V V+SAC G ++ G+ + + + + ++DL + G +E A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 383 MVEGMPMKANVVIWGCLMGA 402
+ EG+ K +VV W L+G
Sbjct: 257 LFEGLSCK-DVVSWNTLIGG 275
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 5/181 (2%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN+ W +M+ G+A++ AL+ + M G PN +F +L +C
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
+EG+ + + R+ H ++ + R G LE+AR + + + +VV
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTS-LISMYARNGGLEDARKVFDASSHR-DVVSCT 134
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ G+ + V + E + S A + Y G +EE + M N
Sbjct: 135 ALITGYASRGDFRSARKVFDEITERDVVSWNAMI---TGYVENGRYEEALELFKEMMRTN 191
Query: 458 L 458
+
Sbjct: 192 V 192
>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
mitochondrial [Vitis vinifera]
gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
Length = 610
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/381 (41%), Positives = 225/381 (59%), Gaps = 4/381 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN I++ Y + P KA+ +Y M GV PD +T P V+KA +L L G +H
Sbjct: 101 FLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGH 160
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ GLE + + +Y K G+ A +F ER L +WNA+IA Q G + +A
Sbjct: 161 VVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKA 220
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ F + G +PD VT+VS SACG LG LE ++ Y F + S+ ++ N+ +
Sbjct: 221 LQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEI--YEFAREEGIDSNIIVHNARL 278
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM KCG MD A +F E+ Q NV SW+++I GYA NG + +AL F M+ G++PN+V
Sbjct: 279 DMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYV 338
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+ VLSAC H G+V EG +F M + I+PR HY CMVDLLGR+G LEEA +
Sbjct: 339 TFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACMVDLLGRSGHLEEAYNFI 398
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++A+ IWG L+GAC N+K+G+ VA L EL P +V+LSN+YA+ G W
Sbjct: 399 KIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIASYHVLLSNMYAAAGRWH 458
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
VE++R MK + K+ AYS
Sbjct: 459 CVEKVRQRMKKKGARKVAAYS 479
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 4/233 (1%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
GD AR++FDE + + WN I+ G ++G +A+ ++ ++ G PD T V
Sbjct: 83 GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVI 142
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC L +L L +H +V VK + + L+ MY K G + A +F + + +
Sbjct: 143 KACAELAELWAGLGMHGHV--VKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERD 200
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
+ +W ++I G +++AL F M +GI+P+ VT V LSAC H G ++ G+ +E
Sbjct: 201 LVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYE 260
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ I+ + +D+ + G +++A + + MP + NV+ W ++G
Sbjct: 261 FARE-EGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQR-NVISWSTVIGG 311
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 258/450 (57%), Gaps = 14/450 (3%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
LL R C++ + + + L TH P ++ L K L+ Y I L
Sbjct: 62 LLIRKCRSMRVLRQI-----HARLLTHAMPISSISFGLCKIIGFCALSP-YGDIDYARKL 115
Query: 81 HSY---SAAFHWNNIIRLYTRLEAP-KKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLF 135
S F WN++IR ++ + P K+ + ++ M R G P+ +T+ VLKA +
Sbjct: 116 FSQIQRPNIFSWNSMIRGCSQSQTPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVS 175
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
ALE G+Q+H+ ++ G S+ F E+ ++ Y+K D A KVFDE +R L +W+ +I+
Sbjct: 176 ALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMIS 235
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G ++ G EA+ +F ++K G PD+VTMVSV SAC + G L+ VH Y+ K
Sbjct: 236 GYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYIN--KQLI 293
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
++D + +L++MY KCG ++ A +VF + + +W+SMIVG A NGLA +AL+ F
Sbjct: 294 ETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFR 353
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M E+ ++PNHVTF+GVLSAC H G V EG+ ++ M + I P YGCMVDLL RA
Sbjct: 354 MEEAKVKPNHVTFIGVLSACAHSGLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRAS 412
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
L+E+A +VE MP+ N VIW L+ C+K N+ E VA+ L ELEP + Y++LSN
Sbjct: 413 LVEDACTLVETMPISPNPVIWRTLLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSN 472
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+YAS WE++ ++R MK + +P S
Sbjct: 473 LYASMSQWEKMSQVRKKMKGMGIKAVPGCS 502
>gi|326507168|dbj|BAJ95661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 224/384 (58%), Gaps = 4/384 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN II Y P KAL + M++ V+ D TL L A + +++G+
Sbjct: 159 SDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLC 218
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L V G E N + S IS+Y+K G E AR++FD P+R W ++I+G +Q G++
Sbjct: 219 HALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQS 278
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEAI +F ++ G + DD T+ +V S+CG +G L+L VH Y + K D + N
Sbjct: 279 KEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYC-DIHGLGK-DISVKN 336
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIR 322
SLIDMY KCG + AY +F + + + SWT +I+G+AANGL+ EALD F M E G+
Sbjct: 337 SLIDMYSKCGDIKKAYDIFCGMVKRDNFSWT-VIMGFAANGLSGEALDLFAQMEEEGGVM 395
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN +TF+GVL++C HGG V++G F M ++Y I PR HYGCMVDLLGRA LL EA
Sbjct: 396 PNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQ 455
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MP+ + V+W L+ AC G V + E+VA+ +Q LEP G V+LS +YA+
Sbjct: 456 FIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLSTVYATTSR 515
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W + ++R + K P S
Sbjct: 516 WVDANKVRTGIYSGRKTKQPGCSF 539
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 16/341 (4%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCY 122
LL + ++R +LHS ++R + P +L + R+G +P D Y
Sbjct: 44 LLSYATVSGLLLRVPLLHS---------VLRSLSSGPVPSLSLSFLSLLRRSGYMPIDNY 94
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+L L + ++ ++ +G QLH+L+V+LGL S+ F + I++YS AR V D
Sbjct: 95 SLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSVLDSA 154
Query: 183 PE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
P+ SWN IIAG G +A+ F + K DDVT+++ AC +++
Sbjct: 155 PKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKV 214
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
H + V + + + M +SLI MY KCG+++ A ++F + N WTSMI GY
Sbjct: 215 GKLCHALL--VTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGY 272
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
G + EA+ F M+ +G++ + T V+S+C G + G+ + +++ +
Sbjct: 273 TQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGR-YVHAYCDIHGLGKD 331
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ ++D+ + G +++A + GM + N W +MG
Sbjct: 332 ISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFS-WTVIMG 371
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 259/510 (50%), Gaps = 82/510 (16%)
Query: 36 TISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS------------- 82
TI + + P I++ + C L Q++A I+T +
Sbjct: 4 TIYNPNRTFNFSPQPPLILSKPFTSCKTPRDLKQLHAIFIKTGQIQDPLTAAEVIKFCAF 63
Query: 83 ------YSAA----------FHWNNIIRLYTRLEAP---KKALDIYIFMSRAG-VLPDCY 122
Y+ A F WN I+R+ +AL ++ M G V P+ +
Sbjct: 64 SSRDIDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRF 123
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS--------------- 167
T P VLKA + L G+Q+H L V+ G +EF S + +Y
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 168 --------------------------------KAGDFEKARKVFDENPERKLGSWNAIIA 195
+ GD + A+ +FDE P+R + SWN +I+
Sbjct: 184 VVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMIS 243
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +Q+G EAI++F ++ +P+ VT+VSV A +G LEL +H Y K+K
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAG--KNKI 301
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D ++ ++L+DMY KCG +D A +VF + + N +W+++I +A +G A +A+ FH
Sbjct: 302 EIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHL 361
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M ++G+ PN V ++G+LSAC H G V+EG+ FF M V ++PR HYGCMVDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LEEA ++ MP++ + VIW L+GAC+ N+KMGE VA+ L EL P G+YV LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+YAS G WE V R+R MK ++ K P S
Sbjct: 482 LYASLGNWEAVARVRLKMKGMDIRKDPGCS 511
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 219/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I Y + ++A+D++ + G+ PD ++L VL A + L G +
Sbjct: 177 WTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYIT 236
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+ N F + + Y K G+ E+AR VFD E+ + SW+++I G + +G KEA+D
Sbjct: 237 ENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALD 296
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +PD MV V +C LG LEL + ++ ++++ +LIDM
Sbjct: 297 LFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLI--NGNEFLDNSVLGTALIDM 354
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGRMD A++VF + + + W + I G A +G +AL F M +SGI+P+ TF
Sbjct: 355 YAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTF 414
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+L AC H G V+EG+ +F M+ V+ + P HYGCMVDLLGRAG L+EA +++ MP
Sbjct: 415 VGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMP 474
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+AN ++WG L+G C + ++ E V K L LEPW G YV+LSNIYA+ WEE +
Sbjct: 475 MEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAK 534
Query: 449 IRAVMKHRNLAKIPAYS 465
IR++M R + KIP YS
Sbjct: 535 IRSIMSERGVKKIPGYS 551
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/402 (32%), Positives = 208/402 (51%), Gaps = 10/402 (2%)
Query: 10 LSSLRMKSSHPLLHRLCKTHTFRKHVT-ISAASSFLDTHEDPAKIVATQLSKCTNLLQLN 68
+SSL + S + +RL + + KH+ I AA L ED ++ L N N
Sbjct: 1 MSSLIVTKSAGIKNRLIQGFSCLKHLKHIHAALLRLGLDED-TYLLNKVLRFSFNFGNTN 59
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
+ + +T F +N +IR + +++++IY M + G+ PD +T P VL
Sbjct: 60 YSFRILDQT----KEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
KA ++ E+G ++HSL V+ G E++ F + I+LY+K G + A KVFD+ P++
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFA 175
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
SW A I+G G+ +EAIDMF L + G PD ++V V SAC GDL + +Y+
Sbjct: 176 SWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYI 235
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
++ + + +L+D YGKCG M+ A VF + + N+ SW+SMI GYA+NGL E
Sbjct: 236 --TENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKE 293
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
ALD F M G++P+ VGVL +C G ++ G ++ N + ++
Sbjct: 294 ALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLI-NGNEFLDNSVLGTALI 352
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
D+ + G ++ A + GM K + V+W + G+VK
Sbjct: 353 DMYAKCGRMDRAWEVFRGM-RKKDRVVWNAAISGLAMSGHVK 393
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 170/495 (34%), Positives = 260/495 (52%), Gaps = 47/495 (9%)
Query: 10 LSSLRMKSSHPLLHRLCKTHTFRKHVTISA---ASSFLDTHEDPAKIVAT-QLSKCTNLL 65
+ S++ + HP + L T ++ I A L+ + VAT L TNL
Sbjct: 1 MKSVKRIAKHPTISLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLD 60
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY---IFMSRAGVLPDCY 122
N++ H ++ F N++IR Y++ P K+ Y + + + PD Y
Sbjct: 61 YANKLLNH-------NNNPTLFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNY 113
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS--------------- 167
T +++ QL A G +H ++ G E + ++G + +Y+
Sbjct: 114 TFTFLVRTCAQLQAHVTGLCVHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGA 173
Query: 168 ----------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
K GD + ARK+FDE PER +WNA+IAG +Q GR++EA+D+F
Sbjct: 174 VEPDLVTQTAMLNACAKCGDIDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFH 233
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++ G + ++V+MV V SAC L L+ VH YV + K + + +L+DMY K
Sbjct: 234 LMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWVHAYVERYKVRMT--VTLGTALVDMYAK 291
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG +D A +VFW + + NV +W+S I G A NG E+LD F+ M+ G++PN +TF+ V
Sbjct: 292 CGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISV 351
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
L C G V+EG+ F+ M+NVY I P+ HYG MVD+ GRAG L+EA + MPM+
Sbjct: 352 LKGCSVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRP 411
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+V W L+ AC + N ++GE + + ELE +DGAYV+LSNIYA WE V +R
Sbjct: 412 HVGAWSALLHACRMYKNKELGEIAQRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQ 471
Query: 452 VMKHRNLAKIPAYSL 466
MK + + K+P S+
Sbjct: 472 TMKAKGVKKLPGCSV 486
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/427 (39%), Positives = 249/427 (58%), Gaps = 9/427 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY---SAAFHWNNIIRLYTRLE 100
L TH P ++ L K L+ Y I L S F WN++IR ++ +
Sbjct: 11 LLTHAMPISSISFGLCKIIGFCALSP-YGDIDYARKLFSQIQRPNIFSWNSMIRGCSQSQ 69
Query: 101 AP-KKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
P K+ + ++ M R G P+ +T+ VLKA + ALE G+Q+H+ ++ G S+ F
Sbjct: 70 TPSKEPVILFRKMVRRGYPNPNTFTMAFVLKACSIVSALEEGQQVHANVLKSGFGSSPFV 129
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
E+ ++ Y+K D A KVFDE +R L +W+ +I+G ++ G EA+ +F ++K G
Sbjct: 130 ETALVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGV 189
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
PD+VTMVSV SAC + G L+ VH Y+ K ++D + +L++MY KCG ++ A
Sbjct: 190 VPDEVTMVSVISACAASGALDTGKWVHAYIN--KQLIETDLELSTALVNMYAKCGCIERA 247
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
+VF + + +W+SMIVG A NGLA +AL+ F M E+ ++PNHVTF+GVLSAC H
Sbjct: 248 KEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPNHVTFIGVLSACAHS 307
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V EG+ ++ M + I P YGCMVDLL RA L+E+A +VE MP+ N VIW
Sbjct: 308 GLVSEGRRYWSSMLE-FGIVPSMELYGCMVDLLCRASLVEDACTLVETMPISPNPVIWRT 366
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+ C+K N+ E VA+ L ELEP + Y++LSN+YAS WE++ ++R MK +
Sbjct: 367 LLVGCKKSKNLDKSEVVAQRLLELEPHNAENYILLSNLYASMSQWEKMSQVRKKMKGMGI 426
Query: 459 AKIPAYS 465
+P S
Sbjct: 427 KAVPGCS 433
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 226/378 (59%), Gaps = 7/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N IIR ++R P +L + M G+ D +T P VLKA +L +I LHSL V
Sbjct: 56 YNTIIRSHSRF-FPSHSLFYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIV 111
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+S+ F ++ I +Y G E A KVFDE ER SW+ +IA +G A EA+D
Sbjct: 112 KYGLDSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALD 171
Query: 209 MFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ + PD+VTM+SV SA LGDLEL V ++ ++ + +LID
Sbjct: 172 LFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLG--LGVSVALGTALID 229
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M+ +CG +D + VF ++ NV +WT++I G +G + EAL FH MR+SG++P++VT
Sbjct: 230 MFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGVHGRSTEALAMFHSMRKSGVQPDYVT 289
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F GVL AC HGG V+EG FE ++ VY+++P HYGCMVD+LGRAGLL EA VE M
Sbjct: 290 FSGVLVACSHGGLVKEGWDIFESIRKVYRMDPLLDHYGCMVDILGRAGLLNEAYDFVERM 349
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PMK N +IW L+GAC N+ + E V + ++ +G V+LSN+Y + G W E
Sbjct: 350 PMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKA 409
Query: 448 RIRAVMKHRNLAKIPAYS 465
IR+ M+ + + K P S
Sbjct: 410 SIRSKMREKRIGKEPGCS 427
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/387 (40%), Positives = 227/387 (58%), Gaps = 8/387 (2%)
Query: 86 AFHWNNIIRLYTRLEAPKK-ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
AF +N +IR + + K AL Y M R V P+ +T P VLKA + LE+G +H
Sbjct: 191 AFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVH 250
Query: 145 SLAVRLGLESNEFCESGFISLY-----SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+ V+ G E + + + +Y + A+KVFDE+P + +W+A+I G ++
Sbjct: 251 ASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVKDSVTWSAMIGGYAR 310
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G + A+ +F ++ G PD++TMVSV SAC LG LEL + Y+ + K+ +S
Sbjct: 311 AGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYI-ERKNIMRSVE 369
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L N+LIDM+ KCG +D A KVF E+ + SWTSMIVG A +G EA+ F M E
Sbjct: 370 L-CNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQ 428
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ V F+GVLSAC H G V +G ++F M+N++ I P+ HYGCMVD+L RAG + E
Sbjct: 429 GVDPDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNE 488
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A V MP++ N VIW ++ AC G +K+GE VAK L EP + YV+LSNIYA
Sbjct: 489 ALEFVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAK 548
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
WE+ ++R +M + + KIP ++
Sbjct: 549 LLRWEKKTKVREMMDVKGMRKIPGSTM 575
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 18/272 (6%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN------PERKLGSWNAIIA 195
Q+HSL ++LGL N + F + S A V N P +N +I
Sbjct: 140 QIHSLILKLGLHHNPLVLTKFAATSSHFNAVHYASSVLFPNDQTTPPPSHDAFLFNTLIR 199
Query: 196 GLSQDGRAK-EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
+Q +K A+ + +++ P+ T V AC + LEL VH + VK
Sbjct: 200 AFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAVHASM--VKFG 257
Query: 255 QKSDTLMLNSLIDMY------GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
+ D + N+L+ MY G G + A KVF E + +W++MI GYA G +
Sbjct: 258 FEEDPHVRNTLVHMYCCCCQDGSSGPVS-AKKVFDESPVKDSVTWSAMIGGYARAGNSAR 316
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
A+ F M+ +G+ P+ +T V VLSAC G ++ GK + E I ++
Sbjct: 317 AVTLFREMQVTGVCPDEITMVSVLSACADLGALELGK-WLESYIERKNIMRSVELCNALI 375
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
D+ + G ++ A + M ++ +V W ++
Sbjct: 376 DMFAKCGDVDRAVKVFREMKVR-TIVSWTSMI 406
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 235/434 (54%), Gaps = 67/434 (15%)
Query: 65 LQLNQIYAHIIRTH------------MLHSYSAAFH------------------WNNIIR 94
+L Q++A II+T+ ++ +++ +FH WN+ ++
Sbjct: 75 FELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLK 134
Query: 95 LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
++P A+ ++ + + V PD +T VL+A L L GR LH + ++G S
Sbjct: 135 ALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRS 194
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
W ++IAG Q G+AKEAI +F ++
Sbjct: 195 -----------------------------------WTSMIAGYVQCGKAKEAIHLFAKME 219
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ G + ++VT+V+V +AC LG L+L +++H+Y + K + + N+LIDMY KCG
Sbjct: 220 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEY--SNRHGFKRNVRISNTLIDMYVKCGC 277
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
++ A KVF E+++ V SW++MI G A +G A EAL F M + GI PN VTF+G+L A
Sbjct: 278 LEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHA 337
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G + EG+ FF M Y I P+ HYGCMVDLL RAGLL EA + MPMK N V
Sbjct: 338 CSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGV 397
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
+WG L+GAC NV+M E KHL EL+P +DG YVVLSNIYA G WE+ R+R MK
Sbjct: 398 VWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMK 457
Query: 455 HRNLAKIPAYSLAT 468
R + K P +S T
Sbjct: 458 DRQVKKTPGWSSIT 471
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 150/329 (45%), Gaps = 47/329 (14%)
Query: 55 ATQLSKCTNLLQLN--QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM 112
++ L C NLL L+ +I ++ S W ++I Y + K+A+ ++ M
Sbjct: 165 SSVLRACLNLLDLSNGRILHGVVEKVGFRS------WTSMIAGYVQCGKAKEAIHLFAKM 218
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
AGV + T+ VL A L AL++G ++H + R G + N + I +Y K G
Sbjct: 219 EEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCL 278
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
E+A KVF+E ER + SW+A+I GL+ GRA+EA+ +F + + G EP+ VT + + AC
Sbjct: 279 EEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHAC 338
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
+G + + S+ YG P +
Sbjct: 339 SHMGLISEGRR-----------------FFASMTRDYGII---------------PQIEH 366
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+ M+ + GL +EA + ++ ++PN V + +L AC V+ + E +K
Sbjct: 367 YGCMVDLLSRAGLLHEAHE---FILNMPMKPNGVVWGALLGACRVHKNVEMAE---EAIK 420
Query: 353 NVYQIEP-RFAHYGCMVDLLGRAGLLEEA 380
++ +++P +Y + ++ AG E+
Sbjct: 421 HLLELDPLNDGYYVVLSNIYAEAGRWEDT 449
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 235/413 (56%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + KAL++++ M GV PD TL V+ A A+ G Q+H+ V
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVV 279
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENP------------------------ 183
+ N+ + + +Y+K +AR VFD P
Sbjct: 280 KRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAAR 339
Query: 184 -------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
E+ + SWNA+IAG +Q+G +EA+ +F+ LK+ P T ++ +AC +L
Sbjct: 340 LMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399
Query: 237 DLELALQVH----KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DL+L Q H K+ F +S ++SD + NSLIDMY KCG ++ VF + + +V S
Sbjct: 400 DLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVS 459
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVGYA NG AL+ F M SG +P+HVT +GVLSAC H G V+EG+ +F M+
Sbjct: 460 WNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMR 519
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ P H+ CMVDLLGRAG L+EA +++ MPM+ + V+WG L+ AC+ GN+++G
Sbjct: 520 TELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELG 579
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++VA+ L E++P + G YV+LSN+YA G W++V R+R M+ R + K P S
Sbjct: 580 KYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCS 632
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 37/350 (10%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER-------------K 186
R++H+ ++ S F ++ + Y K G FE ARKVFD P+R K
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 187 LG------------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
G SWNA+++G +Q R +EA+ F+ + F ++ + S
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
SAC L DL + +Q+H + KS+ D M ++L+DMY KCG + A + F +
Sbjct: 158 LSACAGLTDLNMGIQIHALI--SKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVR 215
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
N+ SW S+I Y NG A +AL+ F M ++G+ P+ +T V+SAC ++EG
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIH 275
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + +VD+ + + EAR + + MP++ NVV ++ + +
Sbjct: 276 ARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR-NVVSETSMVCGYARAAS 334
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
VK + ++ E S A + Y G EE R+ ++K ++
Sbjct: 335 VKAARLMFSNMMEKNVVSWNALIA---GYTQNGENEEAVRLFLLLKRESI 381
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 169/348 (48%), Gaps = 38/348 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + + + ++AL ++ M + + Y+ L A L L +G Q+H+L
Sbjct: 119 WNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + S + +YSK G A++ FD R + SWN++I Q+G A +A++
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + G EPD++T+ SV SAC S + LQ+H V + + K ++D ++ N+L+DM
Sbjct: 239 VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVK-RDKYRNDLVLGNALVDM 297
Query: 269 YGKCGRMDLAYKVFWEID-------------------------------QPNVSSWTSMI 297
Y KC R++ A VF + + NV SW ++I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-FFEMMKNVYQ 356
GY NG EA+ F ++ I P H TF +L+AC + ++ G+ +++K+ +
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417
Query: 357 I----EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G++E+ + E M ++ +VV W ++
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERM-VERDVVSWNAMI 464
>gi|449441061|ref|XP_004138302.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
gi|449477575|ref|XP_004155061.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 242/435 (55%), Gaps = 35/435 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIR--------------------THMLHSYSA----------AF 87
+C+ L LNQ++A IIR H +Y+ F
Sbjct: 62 FKQCSTLKDLNQLHASIIRLGFDQNLFVIGKLIDFCAVSDHGDMNYAVVVFDRIENADGF 121
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR + R A + Y M G+ D +T +LK + QL ++ +G+QLH
Sbjct: 122 LWNTMIRGFGRNRKLLMAFEFYKRMLEKGIAADNFTFSFLLKMTGQLGSIMLGKQLHVNI 181
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++LGL+S+ + + I +Y + D AR +FDE P+ L +WNA+I G EA+
Sbjct: 182 LKLGLDSHVYVRNTLIHMYGRLKDVNIARNLFDELPKTDLVAWNAVIDCHVSCGMYNEAL 241
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL-MLNSLI 266
D+F+ + + G EPD+ T+V SAC +LG L+ VH +V S + T+ + NSLI
Sbjct: 242 DLFVQMLQSGVEPDEATLVVTISACSALGALDCGRWVHSHV---NSNDRGKTIAVFNSLI 298
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR-PNH 325
DMY KCG ++ A ++F + N+ +W +MI+G A +G A +AL F M + P+
Sbjct: 299 DMYAKCGAVEYAREMFNAVSGKNIVTWNTMIMGLATHGDAEDALTLFSNMLAERVETPDG 358
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+ VL AC +GGKV+EG+ +F++M + I+P HYG MVD+LGRAG +EEA +++
Sbjct: 359 VTFLAVLCACNYGGKVEEGRRYFDLMTKHFNIQPTLKHYGSMVDILGRAGFVEEAYQLIK 418
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ N VIW L+ AC+ GNV++GE V+ H+ E+ YV+L+N+YAS G W E
Sbjct: 419 SMPMECNAVIWRTLLAACQMHGNVELGERVSSHVLEIVADHSSDYVLLANMYASSGQWNE 478
Query: 446 VERIRAVMKHRNLAK 460
+ + R M + + K
Sbjct: 479 MIKTRKSMHRKGVEK 493
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 243/445 (54%), Gaps = 31/445 (6%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS--------YSAAFH------------ 88
DP ++T L KC N+ Q+ Q++A + T ++H Y A H
Sbjct: 2 DPDFFIST-LFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNK 60
Query: 89 --------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
W+ +I + + ++ + + RAG PD ++LP V+KA L +G
Sbjct: 61 MEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMG 120
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R +HS ++ GL + F S + +Y+K G + A+++FD P++ L + +IAG ++
Sbjct: 121 RLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC 180
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G+ E+ +F +++ GF PD V MV++ +AC LG + A VH YV + D
Sbjct: 181 GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYV--CARRYSLDVE 238
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++IDMY KCG +D + ++F ++Q NV SW++MI Y +G EAL+ FH M SG
Sbjct: 239 LGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSG 298
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
I PN +TF+ +L AC H G V +G F +M Y + P HY CMVDLLGRAG L++A
Sbjct: 299 IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQA 358
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
++E M ++ + IW +GAC V + E AK L L+ + G Y++LSNIYA+
Sbjct: 359 LRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANA 418
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V +IR +M R L KIP Y+
Sbjct: 419 GRWKDVAKIRNLMAKRRLKKIPGYT 443
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 243/440 (55%), Gaps = 35/440 (7%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSA-------------------AFH---------- 88
LSKCT+L +L QI A+ I+T++ S A H
Sbjct: 36 LSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI 95
Query: 89 --WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+N + R Y R +P A ++ + +G+LPD YT +LKA AL G LH
Sbjct: 96 ILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCF 155
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV+LGL N + I++Y++ D AR VFDE + + S+NAII G ++ + EA
Sbjct: 156 AVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEA 215
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-L 265
+ +F L+ EP DVTM+SV +C LG L+L +H+YV K K + +N+ L
Sbjct: 216 LSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYV---KKKGFDKYVKVNTAL 272
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDM+ KCG + A +F + + +W++MIV +A +G +A+ F M+ G+RP+
Sbjct: 273 IDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDE 332
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+G+L AC H G V++G+ +F M Y I P HYGCMVDLLGRAG L+EA V+
Sbjct: 333 ITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVD 392
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
+ +KA ++W L+ AC GNV+M + V + + EL+ G YV+LSN+YA G WE+
Sbjct: 393 KLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWED 452
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R +MK R + K+P S
Sbjct: 453 VNHLRKLMKDRGVVKVPGCS 472
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 247/439 (56%), Gaps = 14/439 (3%)
Query: 36 TISAASSFLDTHEDPAKIVATQLSKCTNLL--------QLNQIYAHIIRTHMLHSYSAAF 87
TIS S TH AKI A L + +L N+I A I + + +F
Sbjct: 729 TISCFSCLKKTH---AKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPN-PCSF 784
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR + +L++Y M G+ PD + P LK+ L L+ G+ +H
Sbjct: 785 LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHL 844
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V G ++ F ++ + +Y+K GD E AR VFD+ R L SW ++I+G + +G E +
Sbjct: 845 VCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETL 904
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F ++ G P+ V+++SV ACG+LG L H YV Q + + D L+ +++D
Sbjct: 905 GFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQ--TGFEFDILVATAIMD 962
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +DLA +F E ++ W++MI Y +G +A+D F M ++G+RP+HVT
Sbjct: 963 MYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVT 1022
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F VLSAC H G ++EGK +F++M + I + ++Y CMVDLLGRAG L EA ++E M
Sbjct: 1023 FTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ + IWG L+GAC N+ + E +A HL L+P G +V+LSNIYA++ W EVE
Sbjct: 1083 PVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVE 1142
Query: 448 RIRAVMKHRNLAKIPAYSL 466
++R +M R KI +SL
Sbjct: 1143 KVRKMMARRGANKIQGFSL 1161
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 217/379 (57%), Gaps = 3/379 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y EA +AL+++ M P+ T+ L+A LE G+++H +AV
Sbjct: 275 WSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAV 334
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G E + + I +Y K ++A +F P++ + SW A+++G +Q+G A +++
Sbjct: 335 WKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMG 394
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +PD V +V + +A LG + AL +H YV V+S S+ + SLI++
Sbjct: 395 VFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYV--VRSGFNSNVFVGASLIEL 452
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVT 327
Y KCG + A K+F + +V W+SMI Y +G EAL+ F M + S +RPN+VT
Sbjct: 453 YSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVT 512
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +LSAC H G V+EG F+ M + YQ+ P H+G MVDLLGR G L +A ++ M
Sbjct: 513 FLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRM 572
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ A +WG L+GAC N++MGE AK+L L+P G Y++LSNIYA G W+ V
Sbjct: 573 PIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVA 632
Query: 448 RIRAVMKHRNLAKIPAYSL 466
+R +K R L K+ S+
Sbjct: 633 ELRTRIKERGLKKMFGQSM 651
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 193/389 (49%), Gaps = 39/389 (10%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLH----------------SYSAAFH------- 88
+++ C N ++Q+++ + +T +LH S AA
Sbjct: 5 QVLVDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPH 64
Query: 89 -----WNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
WN+ +R Y R + ++ L ++ + + AG PD +T+PI LKA L LE+G+
Sbjct: 65 PNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKV 124
Query: 143 LHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H A + + S+ F S + LYSK G +A KVF+E W +++ G Q+
Sbjct: 125 IHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184
Query: 202 RAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+EA+ +F + + C D VT+VSV SAC L +++ VH V ++ + D
Sbjct: 185 DPEEALALFSQMVMMDC-VVLDPVTLVSVVSACAQLLNVKAGSCVHGLV--IRREFDGDL 241
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++NSL+++Y K G +A +F ++ + +V SW++MI YA N ANEAL+ FH M E
Sbjct: 242 PLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEK 301
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ-IEPRFAHYGCMVDLLGRAGLLE 378
PN VT V L AC ++EGK ++ V++ E F+ ++D+ + +
Sbjct: 302 RFEPNSVTVVSALQACAVSRNLEEGKKIHKIA--VWKGFELDFSVSTALIDMYMKCSCPD 359
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFG 407
EA + + +P K +VV W L+ + G
Sbjct: 360 EAVDLFQRLP-KKDVVSWVALLSGYAQNG 387
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/388 (39%), Positives = 223/388 (57%), Gaps = 15/388 (3%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
ML Y+ W+ +++L+ +K L++ I D T+ VL A +L LE
Sbjct: 193 MLSGYTKNGLWDEVVKLF------RKILELRIEF-------DDVTMISVLMACGRLANLE 239
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
IG + V GL N + I +Y+K G + ARK+FDE +R + +W+A+I+G +
Sbjct: 240 IGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYA 299
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q R KEA+++F ++K P++VTMVSV +C LG E VH Y+ K K K
Sbjct: 300 QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYI--KKKKMKLT 357
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ LID Y KCG +D + +VF E+ NV +WT++I G A NG AL+ F M E
Sbjct: 358 VTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLE 417
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ ++PN VTF+GVLSAC H V +G+H F M+ + IEPR HYGCMVD+LGRAG LE
Sbjct: 418 NDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLE 477
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA ++ MP N V+W L+ +C N++M E +H+ LEP G Y++LSN YA
Sbjct: 478 EAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYA 537
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G E+ R+R+++K + + KIP SL
Sbjct: 538 LVGRVEDAIRVRSLIKEKEIKKIPGCSL 565
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 220/417 (52%), Gaps = 17/417 (4%)
Query: 1 MLSLVPGISLSSLRMKSSHP--LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL 58
++ +P ISL+S+ +P L+ + CKT + V + L T I+ +
Sbjct: 4 IVGCLPNISLTSITQFPENPKSLILQQCKTPKDLQQV----HAHLLKTRRLLDPIITEAV 59
Query: 59 SKCTNLLQLNQI-YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
+ LL + I YA I H+ S+A+ N +IR +P AL ++ M V
Sbjct: 60 LESAALLLPDTIDYALSIFNHIDKPESSAY--NVMIRGLAFKRSPDNALLLFKKMHEKSV 117
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
D +T VLKA ++ AL G Q+H+L ++ G +SNEF E+ I +Y+ G AR
Sbjct: 118 QHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARH 177
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VFD PER + +WN++++G +++G E + +F + + E DDVTM+SV ACG L +
Sbjct: 178 VFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLAN 237
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE+ + +Y+ K ++++TL SLIDMY KCG++D A K+F E+D+ +V +W++MI
Sbjct: 238 LEIGELIGEYIVS-KGLRRNNTLT-TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMI 295
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GYA EAL+ FH M++ + PN VT V VL +C G + GK HF+ K
Sbjct: 296 SGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKK--- 352
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+++ ++D + G ++ + + + M K NV W L+ G KM
Sbjct: 353 KMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK-NVFTWTALIQGLANNGEGKMA 408
>gi|15227067|ref|NP_178398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02980
gi|3461822|gb|AAC32916.1| hypothetical protein [Arabidopsis thaliana]
gi|330250557|gb|AEC05651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 603
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 259/467 (55%), Gaps = 43/467 (9%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH-------- 81
TF KH I ++ ++P ++ SKC +L +L QI A+ I++H+
Sbjct: 17 TFTKHSKIDTVNT-----QNPILLI----SKCNSLRELMQIQAYAIKSHIEDVSFVAKLI 67
Query: 82 ----------SYSAAFH------------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
S S A H +N++ R Y+R P + +++ + G+LP
Sbjct: 68 NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP 127
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D YT P +LKA ALE GRQLH L+++LGL+ N + I++Y++ D + AR VF
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF 187
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D E + +NA+I G ++ R EA+ +F ++ +P+++T++SV S+C LG L+
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +HKY K + +N+ LIDM+ KCG +D A +F ++ + +W++MIV
Sbjct: 248 LGKWIHKYA---KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
YA +G A +++ F MR ++P+ +TF+G+L+AC H G+V+EG+ +F M + + I
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYG MVDLL RAG LE+A ++ +P+ ++W L+ AC N+ + E V++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL+ G YV+LSN+YA WE V+ +R VMK R K+P S
Sbjct: 425 IFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 253/467 (54%), Gaps = 62/467 (13%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAA-----------------------------FHW 89
++CTN+ L +I+AHII+T + H AA + W
Sbjct: 33 TQCTNMKDLQKIHAHIIKTGLAHHTVAASRVLTFCASSSGDINYAYLLFTTIPSPNLYCW 92
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N IIR ++R P A+ +++ M + VLP T P V KA QL A G QLH V+
Sbjct: 93 NTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVK 152
Query: 150 LGLESNEFCESGFISLYS-------------------------------KAGDFEKARKV 178
LGLE ++F ++ I +Y+ K G+ +K+R++
Sbjct: 153 LGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKSRRL 212
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD P R +WN++I+G ++ R EA+++F ++ EP + TMVS+ SAC LG L
Sbjct: 213 FDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGAL 272
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ VH YV + + + ++L ++IDMY KCG + A +VF +S W S+I+
Sbjct: 273 KHGEWVHDYV--KRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIII 330
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A NG +A++ F + S ++P+HV+F+GVL+AC + G V + + +F +M N Y+IE
Sbjct: 331 GLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIE 390
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HY CMV++LG+A LLEEA +++GMP+KA+ +IWG L+ +C K GNV++ + A+
Sbjct: 391 PSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAAQR 450
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL P Y+++SN+ A+ +EE R +M+ R K P S
Sbjct: 451 VCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMRERLAEKEPGCS 497
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 238/443 (53%), Gaps = 63/443 (14%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +IR ++ P +A+ +Y M R V D YT P VLKA +LF + G +H
Sbjct: 73 TFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTRLFWVNTGSAVHG 132
Query: 146 LAVRLGLESN-------------------------EFCE------SGFISLYSKAGDFEK 174
+ +RLG SN + C+ S I+ Y++ GD +
Sbjct: 133 MVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKV 192
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGR-------------------------------A 203
ARK+F+E PER L SWN +I G + G +
Sbjct: 193 ARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLS 252
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
K+A+++F + + G PD+VT++S+ SAC LGDLE +VH V ++ S K TL+ N
Sbjct: 253 KQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEI-SMGKLSTLLGN 311
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+LIDMY KCG + + VFW I +V SW S+IVG A +G E+L F M+ + I P
Sbjct: 312 ALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICP 371
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N +TFVGVL AC H G++ EG +F++M + Y+IEP H GCMVD+LGRAGLL+EA
Sbjct: 372 NEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKF 431
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ M ++ N +IW L+ AC+ G+V++ + + L + G YV++SN+YASRG W
Sbjct: 432 IDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEW 491
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
+ E++R +M + KI S
Sbjct: 492 DGAEKVRKLMDDSGVTKIRGSSF 514
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 41/327 (12%)
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNE--------FCESG 161
+F R G P TLP L+ +Q+H+L + G +N +
Sbjct: 1 MFRKRIGFKP---TLP----------NLKTLKQIHALMIINGFNNNVNFLGDLVLTISTS 47
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ + A ++F + P+ +N +I G SQ AI ++ + + + D
Sbjct: 48 LVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGD 107
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
T V AC L + VH V ++ S+ ++ N+L+ + KCG +++A +
Sbjct: 108 SYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFG--SNAVVRNTLLVFHAKCGDLNVATSL 165
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + +V +W+S+I GYA G A F+ M E + +V G V G++
Sbjct: 166 FDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGY----VKQGEM 221
Query: 342 QEGKHFFEM--MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV----VI 395
+ + F+ +K+V A Y GL ++A + M +A V V
Sbjct: 222 ESARMLFDEAPVKDVVSWNAMIAGYVV-------CGLSKQALELFNEM-CRAGVFPDEVT 273
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQEL 422
L+ AC G+++ G+ V + E+
Sbjct: 274 LLSLLSACADLGDLENGKKVHAKVMEI 300
>gi|356557795|ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Glycine max]
Length = 661
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 231/413 (55%), Gaps = 12/413 (2%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
++ +S N+ YA+ + T M+H+ F WN + R Y + P AL Y M
Sbjct: 65 LSAPMSYAYNVFTWVLSYAYNVFT-MIHN-PNVFTWNTMTRGYAESDNPSPALRFYRQMI 122
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ + PD +T P +LKA + + G +HS+ +R G ES F ++ + +Y+ GD E
Sbjct: 123 VSRIEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTE 182
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF+ +R L + ++I G + +GR EA+ +F + G EPD T+VS+ SA
Sbjct: 183 SAHNVFELMRDRDLVAXISVINGFALNGRPSEALTLFREMSAEGVEPDGFTVVSLLSASA 242
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL +VH Y+ +V ++ S + NSL+D+Y KC WE ++ N SW
Sbjct: 243 ELGALELGRRVHVYLLKVGLRENSH--VTNSLLDLYAKC-------DAIWEXER-NAVSW 292
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
TS+IVG A NG EAL+ F M G+ P+ +TFVGVL AC H G + EG +F MK
Sbjct: 293 TSLIVGLAVNGFGEEALELFREMEGQGLVPSEITFVGVLYACSHCGMLDEGFDYFRRMKE 352
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I PR HYGCMVDLL RAGL+++A ++ MP++ N V W L+GAC G++ +GE
Sbjct: 353 EFGIMPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVTWRTLLGACTIHGHLGLGE 412
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL +LEP G YV+LSN+Y S W +V+ IR M + K YSL
Sbjct: 413 TARSHLLKLEPKHSGDYVLLSNLYTSECRWADVQLIRRSMLKDGVKKTSGYSL 465
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 233/413 (56%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + KAL++++ M G+ PD TL V A L A+ G Q+H+ +
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVM 279
Query: 149 RLGLESNEFC--------------------------------ESGFISLYSKAGDFEKAR 176
+ N+ E+ +S Y+KA + AR
Sbjct: 280 KHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAAR 339
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+F ER + SWNA+IAG +Q+G +EA+ +F+ LK+ P T ++ +AC +L
Sbjct: 340 LMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLA 399
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DL+L Q H ++ F KS + SD + NSLIDMY KCG ++ VF + + + S
Sbjct: 400 DLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVS 459
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVGYA NG EAL+ F M SG RP+HVT +GVLSAC H G V+EG+ +F+ M
Sbjct: 460 WNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMT 519
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ + P HY CMVDLLGRAG L+EA +++ MPM+ + V+WG L+ AC+ GN+ +G
Sbjct: 520 IEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLG 579
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++VA+ L E++P + G YV+LSN+YA G W++V R+R M+ + K P S
Sbjct: 580 KYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCS 632
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 164/341 (48%), Gaps = 37/341 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + + + ++AL + M + + Y+ L A L L IG Q+H L
Sbjct: 119 WNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIA 178
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + S + +YSK A++ FD+ R + SWN++I Q+G A +A++
Sbjct: 179 KSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALE 238
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + CG EPD++T+ SV SAC SL + LQ+H V + K ++D ++ N+L+DM
Sbjct: 239 VFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMK-HDKYRNDLVLGNALVDM 297
Query: 269 YGKCGRMDLAYKVFWEID-------------------------------QPNVSSWTSMI 297
Y KC R++ A VF + + NV SW ++I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALI 357
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-FFEMMKNVYQ 356
GY NG EA+ F ++ I P H TF +L+AC + ++ G+ ++K+ +
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFW 417
Query: 357 I---EPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANV 393
E G ++D+ + GL+E+ R + E M + NV
Sbjct: 418 FKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNV 458
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 37/350 (10%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN----------------- 182
R +H+ ++ S F ++ + +Y K G E ARKVFD
Sbjct: 38 ARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFSWNAVLGALTK 97
Query: 183 --------------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
PER SWNA+++G +Q R +EA+ + + F ++ + S
Sbjct: 98 FGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSA 157
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
SAC L DL + +Q+H + KS+ D M ++L+DMY KC + A + F ++D
Sbjct: 158 LSACAGLMDLSIGVQIHGLI--AKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVR 215
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
N+ SW S+I Y NG A +AL+ F M GI P+ +T V SAC ++EG
Sbjct: 216 NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + +VD+ + + EAR + + MP++ +VV ++ K +
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLR-DVVSETSMVSGYAKASS 334
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
VK + ++ E S A + Y G EE R+ ++K ++
Sbjct: 335 VKAARLMFSNMMERNVVSWNALIA---GYTQNGENEEAVRLFLLLKRESI 381
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 240/408 (58%), Gaps = 10/408 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +++ N ++ ++ ++ W +II Y + P +AL I+ M + V
Sbjct: 219 AKCGEIVRANAVFGRLVDRTIVS-------WTSIISGYAQNGQPIEALRIFSEMRKTNVR 271
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD L VL+A + LE G+ +H +++GLE SLY+K G AR
Sbjct: 272 PDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLF 331
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ L WNA+I+G ++G A+EAI++F +K PD +T+ S +AC +G L
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
ELA + +Y+ S+ ++D ++ SLID Y KCG +D+A VF I +V W++M+V
Sbjct: 392 ELARWMDEYISM--SEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMV 449
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G E++ FH MR++G+ PN VTFVG+L+AC + G V+EG F M++ Y IE
Sbjct: 450 GYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YGIE 508
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HY C+VDLLGRAG L+ A V MP++ V +WG L+ AC+ +V +GE+ A+
Sbjct: 509 PRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAER 568
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L L+P++ G YV LSN+YAS LW+ V ++R +M+ + L K YS+
Sbjct: 569 LFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSV 616
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 194/379 (51%), Gaps = 32/379 (8%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH----------------SYSAA------- 86
P K A+ + + LNQIYA ++ T + + S A
Sbjct: 74 PDKFYASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKF 133
Query: 87 -----FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
F WN I+R Y+R A+++Y M A V PD ++ P VLKA L ALE+GR
Sbjct: 134 PDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGR 193
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H R G ES+ F ++G ++LY+K G+ +A VF +R + SW +II+G +Q+G
Sbjct: 194 RVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNG 253
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ EA+ +F ++K PD + +VSV A + DLE +H V ++ + + D L+
Sbjct: 254 QPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLI 313
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
SL +Y KCG + +A F +++ P++ W +MI GY NG A EA++ F M+ I
Sbjct: 314 --SLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNI 371
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RP+ +T ++AC G ++ + E + ++ + ++D + G ++ AR
Sbjct: 372 RPDSITVTSSIAACAQIGSLELARWMDEYI-SMSEFRNDVIVNTSLIDTYAKCGSVDMAR 430
Query: 382 AMVEGMPMKANVVIWGCLM 400
+ + +P K +VV+W +M
Sbjct: 431 FVFDRIPDK-DVVVWSAMM 448
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 146/324 (45%), Gaps = 45/324 (13%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+++ + GL+ F + ++ S G+ ARK+FD+ P+ + WNAI+ S+ G
Sbjct: 93 QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
AI+M+ ++ PD + V AC +L LE+ +VH +F + +SD +
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIF--RHGFESDVFV 210
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N L+ +Y KCG + A VF + + SWTS+I GYA NG EAL F MR++ +
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNV 270
Query: 322 RPNHVTFVGVLSA-----------CVHG------------------------GKVQEGKH 346
RP+ + V VL A +HG G V +
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGAC 403
FF ++N P + M+ + G EEA + M ++ + + + AC
Sbjct: 331 FFNQVEN-----PSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAAC 385
Query: 404 EKFGNVKMGEWVAKHLQELEPWSD 427
+ G++++ W+ +++ E +D
Sbjct: 386 AQIGSLELARWMDEYISMSEFRND 409
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 253/463 (54%), Gaps = 14/463 (3%)
Query: 3 SLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCT 62
SLVP +L S +K RL K R S FLD H I+ +KC
Sbjct: 82 SLVPDYNLYSKLLKECT----RLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY 122
L +++ + M+ W +I +++ P+ AL ++ M R G+ P+ +
Sbjct: 138 CLDDARRMFDEMPTKDMVT-------WTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
TL +LKAS L+ G QLH+ ++ G +S+ + S + +Y++ G + A+ FD
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P + SWNA+I+G ++ G + A+ + +++ F+P T SV SAC S+G LE
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
VH ++ +KS K + N+L+DMY K G +D A +VF + +P+V SW +M+ G A
Sbjct: 311 WVHAHM--IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+GL E LD F M GI PN ++F+ VL+AC H G + EG ++FE+MK Y++EP
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVP 427
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
HY VDLLGR GLL+ A + MP++ +WG L+GAC N+++G + A+ EL
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFEL 487
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+P G ++LSNIYAS G W +V ++R +MK + K PA S
Sbjct: 488 DPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/410 (39%), Positives = 236/410 (57%), Gaps = 43/410 (10%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
S+SA H + RL+ R A Y M GV P+ +T VLK SC +LE G+
Sbjct: 112 SFSAIIHSHVQSRLFDR------AFGYYSQMLSCGVEPNAFTFSSVLK-SC---SLESGK 161
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------ 189
LH A++LGL S+ + +G + +Y++ GD AR++FD+ PER L S
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMG 221
Query: 190 -------------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
WN +I G +Q G E++ +F + P++VT+++V S
Sbjct: 222 ELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLS 281
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
ACG LG LE +H Y+ + K Q + + +LIDMY KCG ++ A VF I +V
Sbjct: 282 ACGQLGALESGRWIHSYI-ENKGIQ-INVHVGTALIDMYSKCGSLEDARLVFDRIRDKDV 339
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W SMIVGYA +G + AL F M E+G +P +TF+G+LSAC HGG V+EG+ FF +
Sbjct: 340 VAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRL 399
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M++ Y IEP+ HYGCMV+LLGRAG LEEA +V+ M + A+ V+WG L+G C N+K
Sbjct: 400 MRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIK 459
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+GE +AK L + + + G YV+LSN+YA+ G WE V ++R +MK + K
Sbjct: 460 LGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEK 509
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 247/446 (55%), Gaps = 32/446 (7%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS---------YSAAFH----------- 88
DP +++T L+ C N+ Q+ Q++A I +L++ Y H
Sbjct: 1081 DPNCLISTLLN-CKNICQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFD 1139
Query: 89 ---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
W+ +I + ++ + + + R GV PD YTLP V+KA AL++
Sbjct: 1140 EMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDM 1199
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
GR +H + ++ GL + F + + +Y+K E A+ +FD P + L +W +I G ++
Sbjct: 1200 GRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAE 1259
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G AKE++ +F L++ GF PD + MVS+ +AC LG + A VH+YV +++ D
Sbjct: 1260 CGNAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVN--RNRFSLDV 1317
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++ ++IDMY KCG +D A ++F + NV SW++MI Y +G +AL+ F M S
Sbjct: 1318 ILGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSS 1377
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
GI PN++TFV +L AC H G V++G +M + + P H+ CMVDLLGRAG L E
Sbjct: 1378 GILPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTE 1437
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A +E M ++ + +W L+GAC + + E AK L EL+P + G Y++LSNIYA+
Sbjct: 1438 AFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYAN 1497
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V +IR +M R L KIP Y+
Sbjct: 1498 AGQWKDVAKIRDLMTKRKLKKIPGYT 1523
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/477 (33%), Positives = 252/477 (52%), Gaps = 66/477 (13%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSY----------------------------S 84
I L C N+++L +I+AHI++ + S
Sbjct: 16 IFVPILKNCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHHAETEYANLLFKRVADP 75
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFALEI 139
AF +N +IR Y + A+ +Y M + PD +T P V+K+ L ++
Sbjct: 76 NAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVKSCAGLMCYDL 135
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG--- 196
G+Q+H + G +SN E+ + +Y K + A KVF+E ER SWN +I+G
Sbjct: 136 GKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDAVSWNTLISGHVR 195
Query: 197 LSQDGRAK----------------------------EAIDMFIGLKKCGFEPDDVTMVSV 228
L Q RA+ +A++ F ++ G EPD++++VSV
Sbjct: 196 LGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSV 255
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
AC LG LEL +H Y K+ + + N+LI+MY KCG +D ++F ++++
Sbjct: 256 LPACAQLGALELGKWIHFYA--DKAGFLRNICVCNALIEMYAKCGSIDEGRRLFDQMNER 313
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V SW++MIVG A +G A+EA++ F M+++ I PN +TFVG+LSAC H G + EG +F
Sbjct: 314 DVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYF 373
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
E MK Y IEP HYGC+V+LLG +G L++A +++ MPMK + IWG L+ +C N
Sbjct: 374 ESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLSSCRSHSN 433
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+++ +HL ELEP G YV+LSN+YA G W+ V R+R +M+ +++ K P S
Sbjct: 434 LEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCS 490
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 96/229 (41%), Gaps = 35/229 (15%)
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
E +D+ V + C ++ +L+ ++H ++ + Q S ++ ++D+ + A
Sbjct: 12 EMEDI-FVPILKNCPNIVELK---KIHAHIVKFSLSQSS--FLVTKMVDVCNHHAETEYA 65
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF-----HYMRESGIRPNHVTFVGVLS 333
+F + PN + +MI Y N + A+ + H E+ I P+ TF V+
Sbjct: 66 NLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGENPIFPDKFTFPFVVK 125
Query: 334 AC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
+C VHG + G+ +++N +V++ + L++A
Sbjct: 126 SCAGLMCYDLGKQVHGHVFKFGQKSNTVVEN------------SLVEMYVKCDSLDDAHK 173
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
+ E M + + V W L+ + G ++ + + +Q+ +S A V
Sbjct: 174 VFEEMTER-DAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIV 221
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/463 (35%), Positives = 252/463 (54%), Gaps = 14/463 (3%)
Query: 3 SLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCT 62
SLVP +L S +K RL K R S FLD H I+ +KC
Sbjct: 82 SLVPDYNLYSKLLKECT----RLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY 122
L +++ + M+ W +I +++ P+ AL ++ M R G P+ +
Sbjct: 138 CLDDARRMFDEMPTKDMVT-------WTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
TL +LKAS L+ G QLH+ ++ G +S+ + S + +Y++ G + A+ FD
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P + SWNA+I+G ++ G + A+ + +++ F+P T SV SAC S+G LE
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
VH ++ +KS K + N+L+DMY K G +D A +VF + +P+V SW +M+ G A
Sbjct: 311 WVHAHM--IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+GL E LD F M GI PN ++F+ VL+AC H G + EG ++FE+MK Y++EP
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVP 427
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
HY VDLLGR GLL+ A + MP++ +WG L+GAC N+++G + A+ EL
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFEL 487
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+P G ++LSNIYAS G W +V ++R +MK + K PA S
Sbjct: 488 DPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACS 530
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y + ++A+D++ + + PD +T+ VL A QL L G +H +
Sbjct: 181 WTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIM 240
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G+ N F + + +Y+K G+ EKAR VFD PE+ + SW A+I G + +G KEAID
Sbjct: 241 EMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ +PD T+V V SAC LG LEL V V +++ + ++ +LID+
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLV--DRNEFLYNPVLGTALIDL 358
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG M A++VF + + + W ++I G A NG + F + + GI+P+ TF
Sbjct: 359 YAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTF 418
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L C H G V EG+ +F M + + P HYGCMVDLLGRAGLL+EA ++ MP
Sbjct: 419 IGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP 478
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+AN ++WG L+GAC + ++ E K L ELEPW+ G YV+LSNIY++ W+E +
Sbjct: 479 MEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAK 538
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M + + K P S
Sbjct: 539 VRLSMNEKRIQKPPGCS 555
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 187/343 (54%), Gaps = 6/343 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR + A++ Y M G LP+ +T P VLKA +L L++G ++H+L
Sbjct: 78 FLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTL 137
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G + + F ++ + LY+K G E A KVFD+ P++ + SW AII+G G+ +EA
Sbjct: 138 VVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREA 197
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
IDMF L + PD T+V V SAC LGDL +HK + ++ + + + SL+
Sbjct: 198 IDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVR--NVFVGTSLV 255
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG M+ A VF + + ++ SW +MI GYA NGL EA+D F M+ ++P+
Sbjct: 256 DMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCY 315
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VGVLSAC G ++ G+ ++ +N + P ++DL + G + A + +
Sbjct: 316 TVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT--ALIDLYAKCGSMSRAWEVFK 373
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
GM K VV W ++ G VK+ + +++L DG
Sbjct: 374 GMKEKDRVV-WNAIISGLAMNGYVKISFGLFGQVEKLGIKPDG 415
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 142/303 (46%), Gaps = 39/303 (12%)
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + + + + D R +F + + + WN +I GL + +AI+
Sbjct: 39 RFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE 98
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ GF P++ T V AC L DL+L +++H V VK D + SL+ +
Sbjct: 99 FYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLV--VKGGFDCDVFVKTSLVCL 156
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A+KVF +I NV SWT++I GY G EA+D F + E + P+ T
Sbjct: 157 YAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTI 216
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSAC G + G+ + + + + F +VD+ + G +E+AR++ +GMP
Sbjct: 217 VRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTS-LVDMYAKCGNMEKARSVFDGMP 275
Query: 389 MKANVVIWGCL-----------------------------------MGACEKFGNVKMGE 413
K ++V WG + + AC + G +++GE
Sbjct: 276 EK-DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 414 WVA 416
WV+
Sbjct: 335 WVS 337
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 50/250 (20%)
Query: 263 NSLIDMYGKCGR--MDLAYK--VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
N L++M +C D Y +F +I QPN+ W +MI G +N ++A++ + MR
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G PN+ TF VL AC +Q G + +K + + +V L + G L
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKT--SLVCLYAKCGYL 163
Query: 378 EEARAMVEGMPMKANVVIWGCL-----------------------------------MGA 402
E+A + + +P K NVV W + + A
Sbjct: 164 EDAHKVFDDIPDK-NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL-- 458
C + G++ GEW+ K + E+ + +V L ++YA G E+ + M +++
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRN-VFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVS 281
Query: 459 --AKIPAYSL 466
A I Y+L
Sbjct: 282 WGAMIQGYAL 291
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 229/377 (60%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + + K+ALD+++ M + V+P+ +T VL+A +L++G+Q+HS +
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL SN F + + +Y+K G+ E + K+F+E P+R +WN II G Q G + A++
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMN 425
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + +P +VT SV A SL LE LQ+H +K+ DT++ NSLIDM
Sbjct: 426 LFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS--LTIKTMYNKDTVVANSLIDM 483
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR++ A F ++++ + SW +MI GY+ +G++ EAL+ F M+ + +PN +TF
Sbjct: 484 YAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTF 543
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC + G + +G+ FE M Y I+P HY CMV LLGR G +EA ++ +
Sbjct: 544 VGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIA 603
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +V++W L+GAC V +G A+H+ E+EP D +V+LSN+YA+ G W+ V
Sbjct: 604 YQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAF 663
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ + + K P S
Sbjct: 664 VRKYMQKKKVRKEPGLS 680
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 164/313 (52%), Gaps = 6/313 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y +++L ++ M G P+ +T+ LK+ L A +G+ +H A+
Sbjct: 205 WTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCAL 264
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + F + LY+K+G+ A+++F+E P+ L W+ +IA +Q R+KEA+D
Sbjct: 265 KGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALD 324
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ P++ T SV AC S L+L Q+H V +K S+ + N+++D+
Sbjct: 325 LFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCV--LKFGLNSNVFVSNAIMDV 382
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ + K+F E+ N +W ++IVGY G A++ F +M E ++P VT+
Sbjct: 383 YAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTY 442
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL A ++ G + +K +Y + A ++D+ + G + +AR + M
Sbjct: 443 SSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA--NSLIDMYAKCGRINDARLTFDKM 500
Query: 388 PMKANVVIWGCLM 400
K + V W ++
Sbjct: 501 N-KRDEVSWNAMI 512
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 153/324 (47%), Gaps = 21/324 (6%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y+R +AL + + + G + + +LK + + LH+ +LG ++
Sbjct: 111 YSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHAD 170
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
F + I YS G+ + AR VFD+ + + SW ++A +++ +E++ +F ++
Sbjct: 171 AFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRI 230
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G++P++ T+ +C L + VH +K D + +L+++Y K G +
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCA--LKGCYDHDLFVGIALLELYAKSGEI 288
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A ++F E+ + ++ W+ MI YA + + EALD F MR++ + PN+ TF VL AC
Sbjct: 289 IDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQAC 348
Query: 336 VHGGKVQEGKHF------FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
+ GK F + NV+ ++D+ + G +E + + E +P
Sbjct: 349 ASSVSLDLGKQIHSCVLKFGLNSNVFVSNA-------IMDVYAKCGEIENSMKLFEELPD 401
Query: 390 KANVVIWGCLMGACEKFGNVKMGE 413
+ N V W ++ G V++G+
Sbjct: 402 R-NDVTWNTII-----VGYVQLGD 419
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 24/272 (8%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ LH ++ G + F ++ ++ Y ++ + A K+FDE P+ S+ + G S+
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
D + +A+ + + K G E + ++ S+ L +H V+ K +D
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVY--KLGHHADA 171
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +LID Y G +D+A VF +I ++ SWT M+ YA N E+L F+ MR
Sbjct: 172 FVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIM 231
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----------MVD 369
G +PN+ T G L +C+ G F + K+V+ + GC +++
Sbjct: 232 GYKPNNFTISGALKSCL-------GLEAFNVGKSVHGCALK----GCYDHDLFVGIALLE 280
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
L ++G + +A+ + E MP K +++ W ++
Sbjct: 281 LYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIA 311
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 258/463 (55%), Gaps = 38/463 (8%)
Query: 5 VPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNL 64
+ G+ + L MKS LC+++ I A++ LD + KC L
Sbjct: 393 LEGLQVHGLSMKS-------LCQSN-------ICVANAILDMY-----------GKCGAL 427
Query: 65 LQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
++ ++ ++ A WN II + + +K L ++++M ++G+ PD +T
Sbjct: 428 VEACLVFEEMVSRD-------AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTY 480
Query: 125 PIVLKASCQLFALEIGRQLHSLAV--RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
VLKA AL G ++H+ + RLGL+S F I +YSK G EKA K+ D
Sbjct: 481 GSVLKACAGWQALNCGMEIHNRIIKSRLGLDS--FVGIALIDMYSKCGMMEKAEKLHDRL 538
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
E+ + SWNAII+G S +++EA F + + G +PD+ T ++ C +L +EL
Sbjct: 539 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 598
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
Q+H + +K + +SD + ++L+DMY KCG M +F + + +W +M+ GYA
Sbjct: 599 QIHAQI--IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 656
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+GL EAL F YM+ ++PNH TF+ VL AC H G V++G H+F M + Y ++P+
Sbjct: 657 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 716
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
HY C+VD++GR+G + +A ++EGMP +A+ VIW L+ C+ GNV++ E A + +L
Sbjct: 717 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQL 776
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EP AYV+LSNIYA+ G+W EV ++R +M+ L K P S
Sbjct: 777 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 819
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 29/392 (7%)
Query: 10 LSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQ 69
LS+LR+ S LH F V I A+ LD + KC NL +
Sbjct: 288 LSALRLGSQ---LHGHALKTDFGTDVVIGTAT--LDMY-----------MKCNNLSDAQK 331
Query: 70 IYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK 129
++ + + H L SY+A II Y R + +AL ++ + ++G+ D +L +
Sbjct: 332 LF-NSLPNHNLQSYNA------IIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFR 384
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
A + G Q+H L+++ +SN + + +Y K G +A VF+E R S
Sbjct: 385 ACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVS 444
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WNAIIA Q+G ++ + +F+ + + G EPD+ T SV AC L +++H +
Sbjct: 445 WNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRI- 503
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+KS+ D+ + +LIDMY KCG M+ A K+ + + V SW ++I G++ + EA
Sbjct: 504 -IKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEA 562
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMV 368
F M E G+ P++ T+ +L C + V+ GK +++K Q + + +V
Sbjct: 563 QKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLV 620
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
D+ + G +++ + + E P + + V W ++
Sbjct: 621 DMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMV 651
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 163/321 (50%), Gaps = 6/321 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y +K +D+++ M R G + D T +VLK+ L G Q+H LAV
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G + + S + +Y+K + + + F PE+ SW+AIIAG Q+ + ++
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G T SV +C L L L Q+H + +K+ +D ++ + +DM
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHA--LKTDFGTDVVIGTATLDM 319
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + A K+F + N+ S+ ++IVGYA + EAL F +++SG+ + V+
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSL 379
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
G AC EG + MK++ Q A+ ++D+ G+ G L EA + E M
Sbjct: 380 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEM 437
Query: 388 PMKANVVIWGCLMGACEKFGN 408
+ + V W ++ A E+ GN
Sbjct: 438 -VSRDAVSWNAIIAAHEQNGN 457
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+ GD A+K+FD PER + SWN++I+G +G ++ ID+F+ + + G D T
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V +C SL D +Q+H VK D + ++L+DMY KC ++D + + F +
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHG--LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+ N SW+++I G N L+ F M+++G+ + TF V +C
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
DLE A +V + Q DT+ N+++ Y G + +A K+F + + +V SW S+
Sbjct: 92 DLEFAFKVFDGMPQ------RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL 145
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV----HGGKVQEGKHFFEMMK 352
I GY NG + +D F M G + TF VL +C HGG +Q +M
Sbjct: 146 ISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM-- 203
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ ++D+ + L+ + MP K N V W ++ C + +++ G
Sbjct: 204 ---GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NWVSWSAIIAGCVQNDDLRGG 259
Query: 413 EWVAKHLQE 421
+ K +Q+
Sbjct: 260 LELFKEMQK 268
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 228/379 (60%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL +++ M +G P+ +T VL + ++GRQ+HSL +
Sbjct: 79 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+KAG +AR+VFD PER + S AII+G +Q G +EA+D
Sbjct: 139 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L++ G + VT SV +A L L+ QVH +V +++K ++ NSLIDM
Sbjct: 199 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV--LRAKLPFYVVLQNSLIDM 256
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG + + ++F + + V SW +M+VGY+ +GL EA++ F M+E ++P+ VT
Sbjct: 257 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 316
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F+ VLS C HGG G + F+EM+ EP HYGC+VDL GRAG +EEA ++
Sbjct: 317 FLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 376
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP + IWG L+GAC NV +GE+VA+ L E+E + G YV+LSN+YAS G W++V
Sbjct: 377 MPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDV 436
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+R +MK + + K P S
Sbjct: 437 RTVRELMKEKAVIKEPGRS 455
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 12/285 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL A+ G+++H+ ++ E + + I LY+K AR+V DE PER
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I+G SQ G A EA+ +F+ + G P++ T +V ++C S +L Q+H
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V +K+ +S + +SL+DMY K G++ A +VF + + +V S T++I GYA GL
Sbjct: 136 LV--IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 193
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY-- 364
EALD F ++ G+R N+VT+ VL+A + G+ + + + + Y
Sbjct: 194 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV-----HSHVLRAKLPFYVV 248
Query: 365 --GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G L +R + + MP + V+ W ++ K G
Sbjct: 249 LQNSLIDMYSKCGSLTYSRRIFDSMPER-TVISWNAMLVGYSKHG 292
>gi|21780142|gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 258/467 (55%), Gaps = 43/467 (9%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH-------- 81
TF KH I ++ ++P ++ SKC +L +L QI A+ I++H+
Sbjct: 17 TFTKHSKIDTVNT-----QNPILLI----SKCNSLRELMQIQAYAIKSHIEDVSFVAKLI 67
Query: 82 ----------SYSAAFH------------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
S S A H +N++ R Y+R P + +++ + G+LP
Sbjct: 68 NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP 127
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D YT P +LKA ALE GRQLH L+++LGL+ N + I++Y++ D + AR VF
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVF 187
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D E + +NA+I G ++ R EA+ +F ++ +P+++T++SV S+C LG L+
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +HKY K + +N+ LIDM+ KCG +D A +F ++ + +W++MIV
Sbjct: 248 LGKWIHKYA---KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
YA +G A +++ F MR ++P+ +TF+G+L+AC H G+V+EG+ +F M + + I
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYG MVDLL AG LE+A ++ +P+ ++W L+ AC N+ + E V++
Sbjct: 365 PSIKHYGSMVDLLSXAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL+ G YV+LSN+YA WE V+ +R VMK R K+P S
Sbjct: 425 IFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 220/377 (58%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+ + +A+ + FM R GV+P+ +T VL+A +L+ L +QLHS +
Sbjct: 354 WTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDL---KQLHSWIM 410
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLES+ F S I +YSK G+ +A KVF E WN+IIA +Q EA+
Sbjct: 411 KVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALH 470
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ +++ GF D T+ SV AC SL LEL Q H +V K D ++ N+L+DM
Sbjct: 471 LYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL----KFDQDLILNNALLDM 526
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F + + +V SW++MI G A NG + EAL+ F M+ G +PNH+T
Sbjct: 527 YCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITI 586
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL AC H G V EG ++F M N+Y I+P HYGCM+DLLGRA L++ ++ M
Sbjct: 587 LGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMN 646
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +VV W L+ AC NV + + AK + +L+P GAYV+LSNIYA W +V
Sbjct: 647 CEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAE 706
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK R + K P S
Sbjct: 707 VRRTMKKRGIRKEPGCS 723
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A+ + M R GV D T ++K A+ G+++H G F + I+
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y K E+A+ +FD+ PER + SW +I+ S A+ + + + G P+ T
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
SV AC L DL+ Q+H ++ +V +SD + ++LID+Y K G + A KVF E
Sbjct: 389 FSSVLRACERLYDLK---QLHSWIMKV--GLESDVFVRSALIDVYSKMGELLEALKVFRE 443
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + W S+I +A + +EAL + MR G + T VL AC ++ G
Sbjct: 444 MMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELG 503
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ + +V + + ++D+ + G LE+A+ + M K +V+ W ++
Sbjct: 504 R---QAHVHVLKFDQDLILNNALLDMYCKCGSLEDAKFIFNRMA-KKDVISWSTMIAGLA 559
Query: 405 KFG 407
+ G
Sbjct: 560 QNG 562
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 228/410 (55%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I Y R P++AL+++ ++ G V PD T+ + Q+ LE+G++LH
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEF 249
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE-------------------------------KA 175
G+ + + +Y K G E A
Sbjct: 250 VDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDA 309
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R +FDE PER + WNA++AG Q+ + KEAI +F ++K +P+++TMV++ SAC L
Sbjct: 310 RMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQL 369
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + VH Y+ + K + SL+DMY KCG + A VF EI N +WTS
Sbjct: 370 GALEMGMWVHHYI--DRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTS 427
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI G A +G A+EA++ F M + G++P+ +TF+GVLSAC H G V+ G+ FF +M Y
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKY 487
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+E + HY CM+DLLGRAG L+EA +V MPM + V+WG L AC GN+ +GE
Sbjct: 488 HLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKA 547
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L EL+P G YV+L+N+YA + ++ +++R +M+H + K+P S
Sbjct: 548 AMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 158/326 (48%), Gaps = 43/326 (13%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T P ++KA +L G + +LG ++ F + + +S G AR++
Sbjct: 119 PDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFARRL 178
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLG 236
FDE+P R + SWN +I G + G +EA+++F L + G PD+VT++ S C +G
Sbjct: 179 FDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMG 238
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
DLEL ++H++V + ++N+++DMY KCG ++LA VF I SWT+M
Sbjct: 239 DLELGKRLHEFV--DNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTM 296
Query: 297 IVGYAANGL-------------------------------ANEALDCFHYMRESGIRPNH 325
IVG+A G+ EA+ FH M++S + PN
Sbjct: 297 IVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNE 356
Query: 326 VTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
+T V +LSAC G ++ G H+ + +++ A +VD+ + G +++A
Sbjct: 357 ITMVNLLSACSQLGALEMGMWVHHYIDR----HKLHLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGN 408
+ +P++ N + W ++ G+
Sbjct: 413 VFNEIPVQ-NALTWTSMICGLANHGH 437
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + + K+A+ ++ M ++ V P+ T+ +L A QL ALE+G +H
Sbjct: 322 FPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
R L + + + +Y+K G+ +KA VF+E P + +W ++I GL+ G A EA
Sbjct: 382 IDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEA 441
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH-----KYVFQVKSKQKSDTLM 261
I+ F + G +PD++T + V SAC G +E Q KY + K K S
Sbjct: 442 IEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYS---- 497
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ID+ G+ G +D A ++ + P+ W ++ +G
Sbjct: 498 --CMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHG 539
>gi|297740786|emb|CBI30968.3| unnamed protein product [Vitis vinifera]
Length = 1434
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 208/338 (61%), Gaps = 2/338 (0%)
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
+A +L + G ++HS+A+R G ES F ++ + +Y+ G E A K+F+ ER L
Sbjct: 3 RAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLV 62
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
+WN++I G + +GR EA+ +F + G EPD TMVS+ SAC LG L L + H V
Sbjct: 63 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAH--V 120
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
+ VK + N+L+D+Y KCG + A+KVF E+++ +V SWTS+IVG A NG E
Sbjct: 121 YMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKE 180
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
AL+ F + G+ P+ +TFVGVL AC H G V EG +F+ MK Y I P+ HYGCMV
Sbjct: 181 ALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMV 240
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLLGRAGL+++A ++ MPM+ N V+W L+GAC G++ +GE L +LEP G
Sbjct: 241 DLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSG 300
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
YV+LSN+YAS W +V ++R M + K P +SL
Sbjct: 301 DYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSL 338
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y P +AL ++ M GV PD +T+ +L A +L AL +GR+ H V
Sbjct: 64 WNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMV 123
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+ N + + LY+K G +A KVFDE E+ + SW ++I GL+ +G KEA++
Sbjct: 124 KVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALE 183
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSL 265
+F L++ G P ++T V V AC G ++ K + + + K + M
Sbjct: 184 LFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCM---- 239
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+ G+ G + A++ + QPN W +++
Sbjct: 240 VDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 272
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 228/379 (60%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL +++ M +G P+ +T VL + ++GRQ+HSL +
Sbjct: 546 WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 605
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+KAG +AR+VFD PER + S AII+G +Q G +EA+D
Sbjct: 606 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 665
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L++ G + VT SV +A L L+ QVH +V +++K ++ NSLIDM
Sbjct: 666 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV--LRAKLPFYVVLQNSLIDM 723
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG + + ++F + + V SW +M+VGY+ +GL EA++ F M+E ++P+ VT
Sbjct: 724 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 783
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F+ VLS C HGG G + F+EM+ EP HYGC+VDL GRAG +EEA ++
Sbjct: 784 FLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKK 843
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP + IWG L+GAC NV +GE+VA+ L E+E + G YV+LSN+YAS G W++V
Sbjct: 844 MPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDV 903
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+R +MK + + K P S
Sbjct: 904 RTVRELMKEKAVIKEPGRS 922
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 12/285 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL A+ G+++H+ ++ E + + I LY+K AR+V DE PER
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I+G SQ G A EA+ +F+ + G P++ T +V ++C S +L Q+H
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V +K+ +S + +SL+DMY K G++ A +VF + + +V S T++I GYA GL
Sbjct: 603 LV--IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 660
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY-- 364
EALD F ++ G+R N+VT+ VL+A + G+ + + + + Y
Sbjct: 661 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQV-----HSHVLRAKLPFYVV 715
Query: 365 --GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G L +R + + MP + V+ W ++ K G
Sbjct: 716 LQNSLIDMYSKCGSLTYSRRIFDSMPERT-VISWNAMLVGYSKHG 759
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 258/463 (55%), Gaps = 38/463 (8%)
Query: 5 VPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNL 64
+ G+ + L MKS LC+++ I A++ LD + KC L
Sbjct: 330 LEGLQVHGLSMKS-------LCQSN-------ICVANAILDMY-----------GKCGAL 364
Query: 65 LQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
++ ++ ++ A WN II + + +K L ++++M ++G+ PD +T
Sbjct: 365 VEACLVFEEMVSRD-------AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTY 417
Query: 125 PIVLKASCQLFALEIGRQLHSLAV--RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
VLKA AL G ++H+ + R+GL+S F I +YSK G EKA K+ D
Sbjct: 418 GSVLKACAGWQALNCGMEIHNRIIKSRMGLDS--FVGIALIDMYSKCGMMEKAEKLHDRL 475
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
E+ + SWNAII+G S +++EA F + + G +PD+ T ++ C +L +EL
Sbjct: 476 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGK 535
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
Q+H + +K + +SD + ++L+DMY KCG M +F + + +W +M+ GYA
Sbjct: 536 QIHAQI--IKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 593
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+GL EAL F YM+ ++PNH TF+ VL AC H G V++G H+F M + Y ++P+
Sbjct: 594 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 653
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
HY C+VD++GR+G + +A ++EGMP +A+ VIW L+ C+ GNV++ E A + +L
Sbjct: 654 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQL 713
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EP AYV+LSNIYA+ G+W EV ++R +M+ L K P S
Sbjct: 714 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 756
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 171/342 (50%), Gaps = 12/342 (3%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC NL + + + H L SY+A II Y R + +AL ++ + ++G+
Sbjct: 258 KCNNLSDCSNQLFNSLPNHNLQSYNA------IIVGYARSDKGIEALGMFRLLQKSGLGL 311
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D +L +A + G Q+H L+++ +SN + + +Y K G +A VF
Sbjct: 312 DEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 371
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+E R SWNAIIA Q+G ++ + +F+ + + G EPD+ T SV AC L
Sbjct: 372 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALN 431
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+++H + +KS+ D+ + +LIDMY KCG M+ A K+ + + V SW ++I G
Sbjct: 432 CGMEIHNRI--IKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 489
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIE 358
++ + EA F M E G+ P++ T+ +L C + V+ GK +++K Q +
Sbjct: 490 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 549
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ +VD+ + G +++ + + E P + + V W ++
Sbjct: 550 AYIS--STLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMV 588
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 155/388 (39%), Gaps = 77/388 (19%)
Query: 93 IRLYTRLEA--PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
IR + ++ P K L I F S T + + AL G+Q H+ +
Sbjct: 12 IRFFFNFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILT 71
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII---AGLSQDGRAKEAI 207
+ F + I +Y K D A KVFD P+R SWNA++ AG G A++
Sbjct: 72 EFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLF 131
Query: 208 DMFIG------------LKKCGFEPDDVTMVSVTSACGSL-------------------- 235
D G + + G D T V +C SL
Sbjct: 132 DAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDC 191
Query: 236 -----------------------GDLEL----------ALQVHKYVFQVKSKQKSDTLML 262
G LEL ALQ+H + +K+ +D ++
Sbjct: 192 DVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHA--LKTDFGTDVVIG 249
Query: 263 NSLIDMYGKCGRM-DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+ +DMY KC + D + ++F + N+ S+ ++IVGYA + EAL F +++SG+
Sbjct: 250 TATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 309
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ V+ G AC EG + MK++ Q A+ ++D+ G+ G L EA
Sbjct: 310 GLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEA 367
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ E M + + V W ++ A E+ GN
Sbjct: 368 CLVFEEM-VSRDAVSWNAIIAAHEQNGN 394
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 234/414 (56%), Gaps = 36/414 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
AF W ++ + R + +AL ++ M G D + V+ A + ++ G H
Sbjct: 234 AFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHG 293
Query: 146 LAVRLGLES-------------------------------NEFCESGFISLYSKAGDFEK 174
L VR GL S + F + IS Y K G E
Sbjct: 294 LVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVED 353
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A+ +FD P++ SW+A+IAG + ++ EA+++F ++ +PDDVT+VSV SAC +
Sbjct: 354 AKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSN 413
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L LE VH+Y+ + Q + T++L SLIDMY KCG M+ A +VF +++ W
Sbjct: 414 LSALEQGKLVHEYI---RKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCW 470
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
++IVG A NGL +LD F M +G PN +TF GVLSAC HGG V+EG+ FF++M+
Sbjct: 471 NAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQ 530
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
N YQI P HYGCMVDLLGRAG + EA M++ MPM +V WG L+GAC K G+ ++G
Sbjct: 531 NKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVG 590
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
E V K L +L+P DG +LSNIYAS G+W+ V+ +R MK +++AK+ S+
Sbjct: 591 ERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSM 644
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
L+++ G E+AR VFD R +W A+++ ++ EA+ +F +++ G+ D+
Sbjct: 212 LFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAV 271
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQV-----------------------------KSKQ 255
MVSV +AC G ++ H V + + +
Sbjct: 272 MVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGE 331
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D NS+I Y K GR++ A +F + + SW++MI G N ++EAL+ F
Sbjct: 332 SLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDS 391
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
MR I+P+ VT V V+SAC + +++GK E ++ YQ ++D+ + G
Sbjct: 392 MRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRK-YQYNITIVLGTSLIDMYMKCG 450
Query: 376 LLEEARAMVEGMPMKA----NVVIWGCLM 400
+E A + + + K N VI G M
Sbjct: 451 CMEAALEVFDMLEEKGTPCWNAVIVGLAM 479
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 156/413 (37%), Gaps = 78/413 (18%)
Query: 22 LHRLCKT-HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
L R C H + H A+ D + ++ T + LL H ++ L
Sbjct: 11 LSRCCSARHLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLP--HPLHHSLQLFGL 68
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
AF N +++ R P +Y M A PD YT P++ A + G
Sbjct: 69 VRSPNAFTCNTLLKAALRQGFPHLCFPLYASMPAA---PDTYTHPLLAAACAARGDVREG 125
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+HS +V+ G N + + + +YS G AR+VFD P SWN I+A +D
Sbjct: 126 LQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILATYVRD 185
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G ++A+ +F + +
Sbjct: 186 GDVEQAVKVFTRMP-----------------------------------------ERSAA 204
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+++++ ++ + G ++ A VF + + +WT+M+ + N L EAL F MRE G
Sbjct: 205 AVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEG 264
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK----------------------HFFEMMKNVYQIE 358
+ V V++AC G +Q G+ H + ++V
Sbjct: 265 WPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAAR 324
Query: 359 PRFAH--------YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
F + + M+ + G +E+A+A+ + MP K NV W ++ C
Sbjct: 325 RLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVS-WSAMIAGC 376
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T + +AC + GD+ LQVH + VK + + N+L+ MY CG + A
Sbjct: 104 PDTYTHPLLAAACAARGDVREGLQVHSH--SVKHGFSDNLYLRNALMHMYSACGCVASAR 161
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF + SW +++ Y +G +A+ F M E + +++ G
Sbjct: 162 RVFDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPER----SAAAVSAMVALFARRG 217
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAH-YGCMVDLLGRAGLLEEARAMV-----EGMPMKANV 393
V+E + F+ E R A + MV R L EA A+ EG P+ V
Sbjct: 218 MVEEARGVFD------GAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAV 271
Query: 394 VIWGCLMGACEKFGNVKMGE 413
++ ++ AC K G ++ GE
Sbjct: 272 MV--SVVAACAKSGVIQNGE 289
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 230/381 (60%), Gaps = 4/381 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I Y K+AL+++ M V PD T+ V+ A Q ++E+GR +HS
Sbjct: 189 WNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWI 248
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G SN + I LYSK G+ E A ++FD + + SWN +I G + KEA+
Sbjct: 249 NDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEAL 308
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-VKSKQKSDTLMLNSLI 266
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + +K + + + SLI
Sbjct: 309 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLI 368
Query: 267 DMYGKCGRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
DMY KCG +D A +VF + ++S+W +MI G+A +G AN A D F MR +GI P+
Sbjct: 369 DMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDD 428
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFVG+LSAC H G + G++ F M Y+I P+ HYGCM+DLLG +GL +EA M+
Sbjct: 429 ITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMIN 488
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + VIW L+ AC+ GN+++GE AK L ++EP + G+YV+LSNIYA+ G W E
Sbjct: 489 TMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNE 548
Query: 446 VERIRAVMKHRNL-AKIPAYS 465
V +IRA++ + + K+P S
Sbjct: 549 VAKIRALLNDKGMKKKVPGCS 569
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 36/346 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LPD YT P +LK+ + + G+Q+H +
Sbjct: 57 WNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVL 116
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKV------------------------------ 178
+LG + + + + IS+Y++ G E ARKV
Sbjct: 117 KLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQK 176
Query: 179 -FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLG 236
FDE P + + SWNA+I+G + G KEA+++F + PD+ TMV+V SAC
Sbjct: 177 LFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSD 236
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+EL VH ++ S+ ++N+LID+Y K G ++ A ++F + +V SW ++
Sbjct: 237 SIELGRHVHSWIND--HGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTL 294
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNV 354
I GY L EAL F M SG PN VT + +L AC H G + G+ H + K
Sbjct: 295 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLK 354
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + ++D+ + G ++ A+ + + ++ W ++
Sbjct: 355 GVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMI 400
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 122/297 (41%), Gaps = 39/297 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S + + F+ A VFD E L WN + G
Sbjct: 5 RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G PD T + +C + Q+H +V ++
Sbjct: 65 ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDL-- 122
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKV-------------------------------FWEID 286
D + SLI MY + GR++ A KV F EI
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCF-HYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+V SW +MI GY G EAL+ F M + +RP+ T V V+SAC ++ G+
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
H + N + ++DL + G +E A + +G+ K +V+ W L+G
Sbjct: 243 HVHSWI-NDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNK-DVISWNTLIGG 297
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 224/377 (59%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + +KAL++ + M R V P+ YT VL+ SC + R LH +
Sbjct: 130 WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCN--GMSDVRMLHCGII 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F S I +++K G+ E A VFDE WN+II G +Q+ R+ A++
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF + T+ SV AC L LEL +Q H ++ K D ++ N+L+DM
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDM 302
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF ++ + +V +W++MI G A NG + EAL F M+ SG +PN++T
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL AC H G +++G ++F MK +Y I+P HYGCM+DLLG+AG L++A ++ M
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+GAC N+ + E+ AK + L+P G Y +LSNIYA+ W+ VE
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ R + K P S
Sbjct: 483 IRTRMRDRGIKKEPGCS 499
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN+II + + AL+++ M RAG + + TL VL+A L LE+G Q H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ + + + + +Y K G E A +VF++ ER + +W+ +I+GL+Q+G ++E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE---LALQVHKYVFQVKSKQKSDTLML 262
A+ +F +K G +P+ +T+V V AC G LE + K ++ + ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH----Y 398
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ID+ GK G++D A K+ E++ +P+ +W +++
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 121/251 (48%), Gaps = 9/251 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + I++Y K A ++FD+ P+R + SW +I+ S+ ++A+++ + + +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P+ T SV +C + D+ + +H + +K +SD + ++LID++ K G +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGI--IKEGLESDVFVRSALIDVFAKLGEPE 211
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A VF E+ + W S+I G+A N ++ AL+ F M+ +G T VL AC
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G + ++ + + +VD+ + G LE+A + M + +V+ W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-DVITW 327
Query: 397 GCLMGACEKFG 407
++ + G
Sbjct: 328 STMISGLAQNG 338
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 224/378 (59%), Gaps = 7/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N IIR ++R P +L + M G+ D +T P VLKA +L +I LHSL V
Sbjct: 56 YNTIIRSHSRF-FPSHSLSYFFSMRSNGIPLDNFTFPFVLKACSRL---QINLHLHSLIV 111
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL S+ F ++ I +Y G E A KVFDE ER SW+ +IA +G A EA+D
Sbjct: 112 KYGLGSDIFVQNALICVYGYCGSLEMAVKVFDEMSERDSVSWSTVIASFLNNGYASEALD 171
Query: 209 MFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ + PD+VTM+SV SA LGDLEL V ++ ++ + +LID
Sbjct: 172 LFEKMQLEDKVVPDEVTMLSVISAISHLGDLELGRWVRAFIGRLGFGVS--VALGTALID 229
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M+ +CG +D + VF ++ NV +WT++I G +G + EAL FH MR+SG++P++VT
Sbjct: 230 MFSRCGSIDESIVVFEKMAVRNVLTWTALINGLGIHGRSMEALAMFHSMRKSGVQPDYVT 289
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F GVL AC HGG V+EG FE ++ VY ++P HYGCMVD+LGRAGLL EA VE M
Sbjct: 290 FSGVLVACSHGGLVKEGWDIFESIRKVYGMDPLLDHYGCMVDILGRAGLLNEAYDFVERM 349
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PMK N +IW L+GAC N+ + E V + ++ +G V+LSN+Y + G W E
Sbjct: 350 PMKPNSIIWRTLLGACVNHNNLGLAEKVKAKISKISSSQNGDLVLLSNVYGAAGRWVEKA 409
Query: 448 RIRAVMKHRNLAKIPAYS 465
IR+ M+ + + K P S
Sbjct: 410 SIRSKMREKRIGKEPGCS 427
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 224/377 (59%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + +KAL++ + M R V P+ YT VL+ SC + R LH +
Sbjct: 130 WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCN--GMSDVRMLHCGII 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F S I +++K G+ E A VFDE WN+II G +Q+ R+ A++
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF + T+ SV AC L LEL +Q H ++ K D ++ N+L+DM
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDM 302
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF ++ + +V +W++MI G A NG + EAL F M+ SG +PN++T
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL AC H G +++G ++F MK +Y I+P HYGCM+DLLG+AG L++A ++ M
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+GAC N+ + E+ AK + L+P G Y +LSNIYA+ W+ VE
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ R + K P S
Sbjct: 483 IRTRMRDRGIKKEPGCS 499
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN+II + + AL+++ M RAG + + TL VL+A L LE+G Q H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ + + + + +Y K G E A +VF++ ER + +W+ +I+GL+Q+G ++E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE---LALQVHKYVFQVKSKQKSDTLML 262
A+ +F +K G +P+ +T+V V AC G LE + K ++ + ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH----Y 398
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ID+ GK G++D A K+ E++ +P+ +W +++
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 121/251 (48%), Gaps = 9/251 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + I++Y K A ++FD+ P+R + SW +I+ S+ ++A+++ + + +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P+ T SV +C + D+ + +H + +K +SD + ++LID++ K G +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGI--IKEGLESDVFVRSALIDVFAKLGEPE 211
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A VF E+ + W S+I G+A N ++ AL+ F M+ +G T VL AC
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G + ++ + + +VD+ + G LE+A + M + +V+ W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-DVITW 327
Query: 397 GCLMGACEKFG 407
++ + G
Sbjct: 328 STMISGLAQNG 338
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++N LI+MY K ++ A+++F ++ Q NV SWT+MI Y+ + +AL+ M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 320 GIRPNHVTFVGVLSAC--------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
+RPN T+ VL +C +H G ++EG +E ++D+
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVF 204
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMG----------ACEKFGNVKMGEWVAKH 418
+ G E+A ++ + M + + ++W ++G A E F +K ++A+
Sbjct: 205 AKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/487 (33%), Positives = 252/487 (51%), Gaps = 78/487 (16%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRT--------------HMLHSYSA---------------- 85
T + +C +L QL+Q++AH I T ++L +++A
Sbjct: 20 TVIRQCKSLKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTALLPTTNASPTTPAALT 79
Query: 86 --------------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS 131
F +N +IR +T L +P AL I++ M R V PD +T P LKA
Sbjct: 80 GYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFCLKAC 139
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS------------------------ 167
L AL + + LHS A + G ++ F + I +YS
Sbjct: 140 SLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKDVVSYN 199
Query: 168 -------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR-AKEAIDMFIGLKKCGFE 219
K GD ++AR++FD+ P R SW ++AG +Q G +AI +F +
Sbjct: 200 ALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRMLISTVR 259
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD++ +VS SAC LG+LE +H Y+ Q ++ + + L+D+Y KCG ++ A
Sbjct: 260 PDNIALVSALSACAQLGELEQGKSIHVYIKQ--NRIPINAFLSTGLVDLYAKCGCIETAR 317
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
++F N+ +W +++VG +G + +L F M E+GI+P+ V+F+G+L C H G
Sbjct: 318 EIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAG 377
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V E ++FF+ M+ VY++ HYGCM DLLGRAGL+ EA M+E MPM +V +WG +
Sbjct: 378 LVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGGV 437
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+G C GNV++ E A+++ L P DG Y ++++IYA+ G WE+V RIR +M R +
Sbjct: 438 LGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMHSRQVK 497
Query: 460 KIPAYSL 466
K P SL
Sbjct: 498 KNPGCSL 504
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/428 (37%), Positives = 239/428 (55%), Gaps = 36/428 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLK 129
YA+++ T +HS F WN IIR +++ P A+ ++I M + V P T P V K
Sbjct: 76 YAYLVFTQ-IHS-PNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFK 133
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS---------------------- 167
A QL G QLH ++LGL+ + F + I +Y+
Sbjct: 134 AYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVA 193
Query: 168 ---------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
K G+ +++RK+FDE P R SWN++I+G ++GR +EA+D+F +++
Sbjct: 194 WNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERI 253
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
+P + TMVS+ +A LG L+ +H Y+ K+ + + ++ S+IDMY KCG + A
Sbjct: 254 KPSEFTMVSLLNASARLGALKQGEWIHDYI--RKNNFELNVIVTASIIDMYCKCGSIGEA 311
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
++VF +SSW +MI+G A NG NEA+ F + S +RP+ VTFVGVL+AC +
Sbjct: 312 FQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYS 371
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V + K +F +M Y+IEP HY CMVD LGRAGLLEEA ++ MP+ + +IW
Sbjct: 372 GLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSS 431
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+ AC K GNV++ + AKH+ +L+ YV+LSNIYA+ +EE R MK + +
Sbjct: 432 LLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQI 491
Query: 459 AKIPAYSL 466
K P SL
Sbjct: 492 EKEPGCSL 499
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 233/407 (57%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC NL +++ + T ++ W +II Y R A+ ++ M GV
Sbjct: 342 SKCGNLNGATEVFVKMGDTTIVS-------WTSIIAAYVREGLYSDAIGLFDEMQSKGVR 394
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+ ++ A +L+ GR +HS ++ G+ SN + I++Y+K G E+AR V
Sbjct: 395 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 454
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + P + + SWN +I G SQ+ EA+++F+ ++K F+PDD+TM V AC L L
Sbjct: 455 FSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAAL 513
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H ++ ++ SD + +L+DMY KCG + LA +F I + ++ SWT MI
Sbjct: 514 DKGREIHGHI--LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 571
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G NEA+ F+ MR +GI P+ +F +L+AC H G + EG FF M+N +E
Sbjct: 572 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVE 631
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY C+VDLL R G L +A +E MP+K + IWG L+ C +VK+ E VA+H
Sbjct: 632 PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH 691
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + YVVL+N+YA WEEV+++R M+ R + P S
Sbjct: 692 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 738
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 181/343 (52%), Gaps = 13/343 (3%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C +L+Q +I+ I+ + F WN ++ Y ++ ++++ ++ M + GV+ +
Sbjct: 142 CGDLVQGRKIFDKIMNDKV-------FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 194
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
CYT VLK L ++ +++H ++LG SN + I+ Y K G E A +FD
Sbjct: 195 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 254
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
E E + SWN++I G +G + +++FI + G E D T+VSV AC ++G+L L
Sbjct: 255 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSL 314
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+H F VK+ + + N+L+DMY KCG ++ A +VF ++ + SWTS+I Y
Sbjct: 315 GRALHG--FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY 372
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEP 359
GL ++A+ F M+ G+RP+ T ++ AC + +G+ ++KN +
Sbjct: 373 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN--GMGS 430
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++++ + G +EEAR + +P+K ++V W ++G
Sbjct: 431 NLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 472
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 8/278 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL+ + +LE G+++HS+ + G+ +E + + +Y GD + RK+FD+ K
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +++ ++ G +E++ +F ++K G + T V +LG ++ +VH
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 219
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
YV ++ S+T ++NSLI Y K G ++ A+ +F E+ +P+V SW SMI G NG +
Sbjct: 220 YVLKLGF--GSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 277
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHY 364
L+ F M G+ + T V VL AC + G + G+ H F +K + E F++
Sbjct: 278 GNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFG-VKACFSEEVVFSNT 336
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++D+ + G L A + M +V W ++ A
Sbjct: 337 --LLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSIIAA 371
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 178/502 (35%), Positives = 265/502 (52%), Gaps = 55/502 (10%)
Query: 8 ISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL--------- 58
I L++LR K HP L L +F I L TH VA++L
Sbjct: 4 IVLNTLRFK--HPKLALLQSCSSFSDLKIIHGF--LLRTHLISDVFVASRLLALALCVDD 59
Query: 59 ---SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
K TNLL YA+ I + + + F +N +IR ++ P KA Y M ++
Sbjct: 60 STFHKPTNLLG----YAYGIFSQIQNP--NLFVFNVLIRCFSTGAEPSKAFGFYTQMLKS 113
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS-------- 167
+ PD T P ++KAS ++ + +G Q HS VR G +++ + E+ + +Y+
Sbjct: 114 RIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAA 173
Query: 168 -----------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
K G E AR++FDE P R L +W+ +I G +++ +
Sbjct: 174 GRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFE 233
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+AID+F +K+ G ++ MVSV S+C LG LE + H+YV VKS + ++ +
Sbjct: 234 KAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYV--VKSHMTVNLILGTA 291
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+DMY +CG ++ A +VF E+ + SW+S+I G A +G A++A+ F M G P
Sbjct: 292 LVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPR 351
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+T VLSAC HGG V +G +E MK Y IEPR HYGC+VD+LGRAG L EA +
Sbjct: 352 DITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFI 411
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MP+K N I G L+GAC+ + N ++ E V L E++P G YV+LSNIYA G WE
Sbjct: 412 LKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWE 471
Query: 445 EVERIRAVMKHRNLAKIPAYSL 466
++E +R +MK + + K P +SL
Sbjct: 472 KLESLRDIMKEKLVKKPPGWSL 493
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 249/473 (52%), Gaps = 36/473 (7%)
Query: 24 RLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY 83
RL H R H+T A +I+A +S C + N+I A+ R
Sbjct: 14 RLLHGHKSRTHLTQIHAHFLRHGLHQSNQILAHFISVCASF---NRI-AYADRLFSQSHN 69
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
F +N+II+ ++ ++L ++ M ++PD YT +LK+ L +G+ +
Sbjct: 70 PNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCEYSLGQCV 129
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP-------------------- 183
S R G G + LY E A K+FDE
Sbjct: 130 ISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFDEMSHRDVVVWNLMIRGFCKTGNV 189
Query: 184 -----------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
ER L SWN II+ L+Q+ R EA+++F +++ GF+PD+VT+V++ C
Sbjct: 190 DFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEVTVVTMLPVC 249
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LG LE+ ++H Y K T + NSLID Y KCG ++ AY +F ++ +V S
Sbjct: 250 SRLGALEVGQRIHSYA-SSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQKMTCKSVVS 308
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W ++I+G+A NG A+D F MR+ ++PN TFV VL+ACVH G +++G+ F M
Sbjct: 309 WNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGLLEKGRELFSSMA 368
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
Y+I+P+ H+GCMVDLLGR G +EEA +++ MPM+ N +WG ++GAC GN+K+
Sbjct: 369 EDYEIQPKLEHFGCMVDLLGRGGCVEEAHKLIKSMPMQPNATLWGAVLGACRTHGNLKLA 428
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E K L LEPW+ G YV+LSN+ A G WEEVE +R M+ +++ K P S
Sbjct: 429 EMAVKELISLEPWNSGNYVLLSNMLAEEGRWEEVENVRQWMREKSVKKAPGQS 481
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 226/393 (57%), Gaps = 18/393 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y R +AL+ Y M G+ PD T+ V+ + QL L++GR+ H
Sbjct: 148 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 207
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD----------------ENPERKLGSWNA 192
GL+ + + +Y K G+ E ARK+FD E P++ + WNA
Sbjct: 208 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNA 267
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+I G R KEA+ +F ++ PD+VTMVS SAC LG L++ + +H Y+ K
Sbjct: 268 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYI--EK 325
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
+ + + +LIDMY KCG++ A +VF E+ N +WT++I G A +G A+ A+
Sbjct: 326 HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAY 385
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
F M ++ + P+ VTF+G+LSAC HGG V+EG+ +F M + + + P+ HY CMVDLLG
Sbjct: 386 FSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLG 445
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
RAGLLEEA +++ MP++A+ V+WG L AC GNV MGE A L +++P G YV+
Sbjct: 446 RAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVL 505
Query: 433 LSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L+N+Y +W+E + R +M+ R + K P S
Sbjct: 506 LANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCS 538
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 173/343 (50%), Gaps = 27/343 (7%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
F WN IR + E P++A+ +Y + G PD YT P++ KA +L + +G ++
Sbjct: 43 TFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEIL 102
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ LG +S+ F + I L GD + ARK+FD++ R L SWN++I G + G A
Sbjct: 103 GHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAY 162
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA++ + +K G +PD+VTM+ V S+C L DL+L + H Y+ + + K + N+
Sbjct: 163 EALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE--NGLKLTVPLANA 220
Query: 265 LIDMYGKCGRMDLAYKVF----------W------EIDQPNVSSWTSMIVGYAANGLANE 308
L+DMY KCG ++ A K+F W E+ +V W +MI GY E
Sbjct: 221 LMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKE 280
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYG 365
AL F+ M+ I P+ VT V LSAC G + G H+ E +++ A
Sbjct: 281 ALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK----HELSLNVALGT 336
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
++D+ + G + +A + + +P + N + W ++ GN
Sbjct: 337 ALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 378
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 235/383 (61%), Gaps = 8/383 (2%)
Query: 86 AFHWNNIIR-LYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQL 143
AF +N++IR L AP AL +Y M RAG P+ +TL LKA + A GRQL
Sbjct: 140 AFCYNSLIRALPAAGSAP--ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQL 197
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP-ERKLGSWNAIIAGLSQDGR 202
H+ A+R GL ++ + ++G ++LY+K AR VFD ++ L +W+A+++G S+ G
Sbjct: 198 HAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGM 257
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA+ +F ++ G EPD+VTMVSV SAC G L+L VH Y+ + D +
Sbjct: 258 VNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYID--RKGITVDLELS 315
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+LIDMY KCG ++ A VF + + + +W++MIVG+A +GL +AL F M E +R
Sbjct: 316 TALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVR 375
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN+VTF+GVLSAC H G V++G+ ++ +M+N+ I+P +YGCMVDLL R+GLL++A +
Sbjct: 376 PNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYS 434
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
V GMP+ N VIW L+ AC+ + + E K L ELEP + YV+LSN+YAS
Sbjct: 435 FVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQ 494
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+ V +R MK +N+ I S
Sbjct: 495 WDRVSYLRRKMKGKNVTAIAGRS 517
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 166/360 (46%), Gaps = 21/360 (5%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
P++AL+ +I ++ C L + A L L + R + A+ L S C S
Sbjct: 62 PREALEAHIV----SLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLAS---CVSA 114
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EP 220
++A AR +FD+ P+ +N++I L G A A+ ++ + + G P
Sbjct: 115 PAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAP-ALAVYRRMLRAGSPRP 173
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
+ T+ AC ++ Q+H + + + L+++Y KC ++ LA
Sbjct: 174 NSFTLAFALKACAAVPAPGEGRQLHAQAL--RQGLATSAYVQTGLLNLYAKCEQVALART 231
Query: 281 VFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF + N+ +W++M+ GY+ G+ NEAL F M+ G+ P+ VT V V+SAC G
Sbjct: 232 VFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAG 291
Query: 340 KVQEGK--HFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ GK H + K + +E A ++D+ + GL+E AR + + M ++ + W
Sbjct: 292 ALDLGKWVHAYIDRKGITVDLELSTA----LIDMYAKCGLIERARGVFDAM-VEKDTKAW 346
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKH 455
++ G V+ + + EL+ + ++ + + A GL E+ R ++M++
Sbjct: 347 SAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQN 406
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 257/494 (52%), Gaps = 46/494 (9%)
Query: 10 LSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDP---AKIVAT-QLSKCTNLL 65
+SSLR HP + + T R+ I DP + VA+ L+ NL
Sbjct: 1 MSSLRCIVKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLH 60
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYT 123
NQ+ + F +N++IR +++ P ++ Y I S + PD YT
Sbjct: 61 YSNQVLDN-------SQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYT 113
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY----------------- 166
+++ S QL A G +H AV+ G E + +SG I +Y
Sbjct: 114 FTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSIC 173
Query: 167 --------------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+K GD ARK+FD+ + +WNA+I+G Q G+++EA+ +F
Sbjct: 174 EPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNL 233
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+++ G + ++V+MVSV SAC LG L+ H Y+ ++K + + +LIDMY KC
Sbjct: 234 MQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYI--ERNKLRMTLTLGTALIDMYAKC 291
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G M+ A +VFW + + NV +W+S I G A NG + L+ F M++ ++PN +TFV VL
Sbjct: 292 GNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVL 351
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
C G V+EG+ FE M VY IEPR HYGCMVDL GRAG L+EA + MP++ +
Sbjct: 352 RGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPH 411
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
V WG L+ AC+ + N++MGE ++ + ELE + GAYV+LSNIYA W+ V +R
Sbjct: 412 VGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQT 471
Query: 453 MKHRNLAKIPAYSL 466
M + + K P S+
Sbjct: 472 MNVKGVRKQPGCSV 485
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 250/441 (56%), Gaps = 37/441 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL-----------EAPKK-- 104
+S CT++ + I+A +I++ +YS F + ++ +Y +L E P K
Sbjct: 72 ISSCTSVSYCSAIHARVIKSL---NYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDL 128
Query: 105 ------------------ALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
L+ + M + +G P+ TL V+ A + AL+ G+ LH
Sbjct: 129 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHG 188
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ V+LG+ + I++Y K G + A ++F+E P R L SWN+++ + +G A++
Sbjct: 189 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 248
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+D+F +K+ G PD TMV++ AC G A +H Y+ + +D ++ +L
Sbjct: 249 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIH--RCGFNADIIIATAL 306
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+++Y K GR++ + +F EI + +WT+M+ GYA + EA+ F M + G+ +H
Sbjct: 307 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 366
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +LSAC H G V+EGK +FE+M VY++EPR HY CMVDLLGR+G LE+A +++
Sbjct: 367 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 426
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + +WG L+GAC +GNV++G+ VA+ L L+P Y++LSNIY++ GLW +
Sbjct: 427 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRD 486
Query: 446 VERIRAVMKHRNLAKIPAYSL 466
++RA+MK R L + P S
Sbjct: 487 ASKVRALMKERRLTRNPGCSF 507
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 235/436 (53%), Gaps = 9/436 (2%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHW 89
+ + + A D A +AT +KC L Y + M S W
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE-----YGLTLFEKM--SMRDVVSW 286
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
II ++ + A+ +I M + V P+ YT V+ L +E G QLH+L +
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LGL ++ E+ +++Y+K G + +F E R + SW+ IIAG Q G EA ++
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFEL 406
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
++ G +P + + SV SACG++ LE Q+H YV + + + ++L++LI+MY
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA--MVLSALINMY 464
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG ++ A ++F + ++ SWT+MI GYA +G + E +D F + G+RP+ VTF+
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVLSAC H G V G H+F M YQI P HYGCM+DLL RAG L +A M+E MP
Sbjct: 525 GVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPF 584
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ V+W L+ AC G+V+ G A+ + +LEP G ++ L+NIYAS+G W E I
Sbjct: 585 HRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADI 644
Query: 450 RAVMKHRNLAKIPAYS 465
R +MK + + K P +S
Sbjct: 645 RKLMKSKGVIKEPGWS 660
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 157/319 (49%), Gaps = 4/319 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II R K+AL + M R+ V D YT I LKA AL GR++H+ A+
Sbjct: 185 WTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + F + ++Y+K G E +F++ R + SW II L Q G+ + A+
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
FI +++ P++ T +V S C +L +E Q+H + + + + NS++ M
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL--GLAASLSVENSIMTM 362
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +F E+ + ++ SW+++I GY G +EA + +MR G +P
Sbjct: 363 YAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFAL 422
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC + ++ GK + ++ +E ++++ + G +EEA + +
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481
Query: 389 MKANVVIWGCLMGACEKFG 407
++V W ++ + G
Sbjct: 482 -NDDIVSWTAMINGYAEHG 499
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 5/322 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W +I Y +AL ++ M +G+ D + L + KA + G LH A
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL ++ F S + +Y+K G + R+VF E P R + SW AII GL + G KEA+
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F + + E D T AC G L ++H +K + + N+L
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA--MKKGFDVSSFVANTLAT 260
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG+++ +F ++ +V SWT++I G A+ F MRES + PN T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F V+S C + +++ G+ ++ ++ + + ++ + + G L + + M
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 388 PMKANVVIWGCLMGACEKFGNV 409
+ ++V W ++ + G+V
Sbjct: 380 TRR-DIVSWSTIIAGYXQGGHV 400
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMV 226
K G AR++FD+ ++ SW +I+G + EA+ +F ++ + G D +
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
ACG D+ +H Y VK+ + + ++L+DMY K G++ +VF E+
Sbjct: 121 LAHKACGLNSDVNYGELLHGYA--VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP 178
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
NV SWT++I G G EAL F M S + + TF L AC G + G+
Sbjct: 179 MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 347 FF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ MK + + A+ + + + G LE + E M M+ +VV W ++ +
Sbjct: 239 IHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTIITTLVQ 295
Query: 406 FGN 408
G
Sbjct: 296 MGQ 298
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 232/412 (56%), Gaps = 11/412 (2%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T S+C L +++ I ++ WN++I Y+R+ A+ ++ M A
Sbjct: 169 TMYSRCGELGCARRVFDEISEKDLVS-------WNSMISGYSRMGYAGDAVGLFGEMRDA 221
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G PD TL +L A L L +G + V ++ N F S I +Y K GD A
Sbjct: 222 GFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSA 281
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R+VFD ++ + +WNA+I G +Q+G + EAI +F G+++ G PD +T+V V SAC S+
Sbjct: 282 RRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASI 341
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G L+ + Y + ++D + +LIDMY KCG +D A +VF ++ Q N SW +
Sbjct: 342 GALDFGKWLDTYASE--RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNA 399
Query: 296 MIVGYAANGLANEALDCFHYMRESG--IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
MI A +G E+L F M + G +RPN ++F+GVLSACVH G V EG+ F++M +
Sbjct: 400 MISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSS 459
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ + P+ H+ CMVDLL RAG + EA +E MP K + V+ G L+GAC+K NV + E
Sbjct: 460 SFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSE 519
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V L E+EP + G Y++ S I+A+ W++ R+R +M+ R + K P S
Sbjct: 520 RVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPGCS 571
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/400 (31%), Positives = 211/400 (52%), Gaps = 29/400 (7%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHII------RTHMLH 81
+H +H T + A S + + + L +CT+ L QI+ +I +LH
Sbjct: 8 SHLISRHFTKALAKSQRHAQQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLH 67
Query: 82 SYSAAFHWNNIIRLYTRLEAPKK-------------------ALDIYIFMSRAGVLPDCY 122
+ +NN L++++ P + ++ Y M G+ P+ +
Sbjct: 68 RFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNF 127
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T P V A L L G+ HS ++ GL ++ I++YS+ G+ AR+VFDE
Sbjct: 128 TYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEI 187
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
E+ L SWN++I+G S+ G A +A+ +F ++ GFEPD++T+VS+ ACG LGDL L
Sbjct: 188 SEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGS 247
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+ +V V+++ ++ + ++LI MYGKCG + A +VF + + +V +W +MI GYA
Sbjct: 248 WIEGFV--VENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQ 305
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
NG+++EA+ F MRESG+ P+ +T VGVLSAC G + GK + + + ++
Sbjct: 306 NGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGK-WLDTYASERGLQNDIY 364
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++D+ + G L++A + E MP K N V W ++ A
Sbjct: 365 VSTALIDMYAKCGSLDDALRVFEDMPQK-NEVSWNAMISA 403
>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 598
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/450 (37%), Positives = 243/450 (54%), Gaps = 49/450 (10%)
Query: 58 LSKCT---NLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSR 114
LS+C+ + + +I A ++ + +L SA H + +IR + P+ AL +Y + R
Sbjct: 24 LSRCSGGADARPIARIQAALVTSGLLRR-SAELH-DALIRAHASSGRPQAALPLYAHLIR 81
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQL----HSLAVRLGL------------------ 152
AG+ P +TLP +LK+ A+ R+L H+ AVRLGL
Sbjct: 82 AGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAVRLGLAGFLLVNNALIRVHAGLL 141
Query: 153 ----------------ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+++ F + I+ +++AG AR +FDE PER SW+A++ G
Sbjct: 142 GRLADAHLLLRTSAAVDASTF--NTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNG 199
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
Q G +EA+ +F ++ G PDD +V V +AC LG LE VH Y+ K+
Sbjct: 200 YVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYL---KANNI 256
Query: 257 SDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
T+ L + L+DMY KCG + L +VF + NV +WT+MI G A +G +++L F
Sbjct: 257 RMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQ 316
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M SG++P+ + F+G L AC H G V +G+ F M N Y I+P+ HYGCMVDLL R G
Sbjct: 317 MESSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNG 376
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LL EAR MVE MPMK + +IWG LM C NV++ E+V KH ELEP GAYV+L N
Sbjct: 377 LLSEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGN 436
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
IY++ G IR +M+ + + K P S
Sbjct: 437 IYSASGRHASAREIRNLMREKGVEKTPGCS 466
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 47/323 (14%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W+ ++ Y + ++AL ++ M GV PD L VL A QL ALE G+ +H
Sbjct: 190 AVSWSAMVNGYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHG 249
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ F + + +Y+K G+ + +VF+ ++ + +W +I GL+ GR +
Sbjct: 250 YLKANNIRMTVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSD 309
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
++ +F ++ G +PDD+ + AC G ++ K ++ + NS+
Sbjct: 310 SLTLFSQMESSGVKPDDIAFIGALCACTHTGLVD------------KGRE-----LFNSM 352
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
++ YG +P + + M+ A NGL +EA D M ++P+
Sbjct: 353 VNNYGI---------------KPKIEHYGCMVDLLARNGLLSEARDMVEKM---PMKPDA 394
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR----FAHYGCMVDLLGRAGLLEEAR 381
+ + +++ C V+ ++ ++K+ ++EP + G + GR E R
Sbjct: 395 LIWGALMAGCRFHKNVELAEY---VIKHWIELEPDKSGAYVLLGNIYSASGRHASAREIR 451
Query: 382 AM-----VEGMPMKANVVIWGCL 399
+ VE P +NV I G +
Sbjct: 452 NLMREKGVEKTPGCSNVEIKGVI 474
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/383 (41%), Positives = 235/383 (61%), Gaps = 8/383 (2%)
Query: 86 AFHWNNIIR-LYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQL 143
AF +N++IR L AP AL +Y M RAG P+ +TL LKA + A GRQL
Sbjct: 91 AFCYNSLIRALPAAGSAP--ALAVYRRMLRAGSPRPNSFTLAFALKACAAVPAPGEGRQL 148
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP-ERKLGSWNAIIAGLSQDGR 202
H+ A+R GL ++ + ++G ++LY+K AR VFD ++ L +W+A+++G S+ G
Sbjct: 149 HAQALRQGLATSAYVQTGLLNLYAKCEQVALARTVFDGMAGDKNLVAWSAMVSGYSRVGM 208
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA+ +F ++ G EPD+VTMVSV SAC G L+L VH Y+ + D +
Sbjct: 209 VNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYID--RKGITVDLELS 266
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+LIDMY KCG ++ A VF + + + +W++MIVG+A +GL +AL F M E +R
Sbjct: 267 TALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVR 326
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN+VTF+GVLSAC H G V++G+ ++ +M+N+ I+P +YGCMVDLL R+GLL++A +
Sbjct: 327 PNNVTFIGVLSACAHSGLVEDGRRYWSIMQNL-GIKPSMENYGCMVDLLCRSGLLDDAYS 385
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
V GMP+ N VIW L+ AC+ + + E K L ELEP + YV+LSN+YAS
Sbjct: 386 FVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYASNSQ 445
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+ V +R MK +N+ I S
Sbjct: 446 WDRVSYLRRKMKGKNVTAIAGRS 468
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 166/360 (46%), Gaps = 21/360 (5%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
P++AL+ +I ++ C L + A L L + R + A+ L S C S
Sbjct: 13 PREALEAHIV----SLVRRCPGLLALRSAHAHLTRLRLPRLTAAFALSKLLAS---CVSA 65
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EP 220
++A AR +FD+ P+ +N++I L G A A+ ++ + + G P
Sbjct: 66 PAPAAAQAAASSYARNLFDQIPDPTAFCYNSLIRALPAAGSAP-ALAVYRRMLRAGSPRP 124
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
+ T+ AC ++ Q+H + + + L+++Y KC ++ LA
Sbjct: 125 NSFTLAFALKACAAVPAPGEGRQLHAQAL--RQGLATSAYVQTGLLNLYAKCEQVALART 182
Query: 281 VFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF + N+ +W++M+ GY+ G+ NEAL F M+ G+ P+ VT V V+SAC G
Sbjct: 183 VFDGMAGDKNLVAWSAMVSGYSRVGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAG 242
Query: 340 KVQEGK--HFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ GK H + K + +E A ++D+ + GL+E AR + + M ++ + W
Sbjct: 243 ALDLGKWVHAYIDRKGITVDLELSTA----LIDMYAKCGLIERARGVFDAM-VEKDTKAW 297
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKH 455
++ G V+ + + EL+ + ++ + + A GL E+ R ++M++
Sbjct: 298 SAMIVGFAIHGLVEDALGLFSRMLELKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQN 357
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/485 (34%), Positives = 258/485 (53%), Gaps = 46/485 (9%)
Query: 19 HPLLHRLCKTHTFRK----HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHI 74
HP + L TF++ H + + D H + A LS T L NQI
Sbjct: 15 HPAISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRS 74
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYTLPIVLKASC 132
+ + F N++IR + + P+K+ D Y I S G+ PD YT+ +++A
Sbjct: 75 DKPTL-------FALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACT 127
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS------------------------- 167
L E G Q+H + +R G +++ ++G ISLY+
Sbjct: 128 GLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTA 187
Query: 168 ------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ GD ARK+F+ PE+ +WNA+I+G +Q G ++EA+++F ++ G + +
Sbjct: 188 MVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVN 247
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V+M+SV SAC LG L+ H Y+ ++K K + +L+D+Y KCG MD A +V
Sbjct: 248 GVSMISVLSACTQLGALDQGRWAHSYI--ERNKIKITVRLGTTLVDLYAKCGDMDKAMEV 305
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
FW +++ NV +W+S + G A NG + L F M++ G+ PN VTFV VL C G V
Sbjct: 306 FWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 365
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG+ F+ M+N + IEP+ HYGC+VDL RAG LE+A ++++ MPMKA+ +W L+
Sbjct: 366 DEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLLH 425
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A + N+++G +K + ELE + GAYV+LSNIYA W+ V +R MK + + K
Sbjct: 426 ASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSDDWDNVSHVRQSMKSKGVRKQ 485
Query: 462 PAYSL 466
P S+
Sbjct: 486 PGCSV 490
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 227/418 (54%), Gaps = 10/418 (2%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P +IV L C + Q++ + + I ++ FH R Y K ++
Sbjct: 570 PIRIV-KNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGRGYL-----GKCFEVL 623
Query: 110 IFMSRA--GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
M R+ G P+ T ++ A E G +H L ++ G+ + ++LY
Sbjct: 624 SRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYG 683
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
K GD + K+F++ + L SWN +I Q+G A+E + F + G +PD T ++
Sbjct: 684 KTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLA 743
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V C +G + L+ +H + ++T + +L+D+Y K GR++ + VF EI
Sbjct: 744 VLRVCEDIGVVRLSQGIHGLIMFCGFN--ANTCITTALLDLYAKLGRLEDSSTVFLEITS 801
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
P+ +WT+M+ YA +G +A+ F M G+ P+HVTF +L+AC H G V+EG+++
Sbjct: 802 PDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYY 861
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
FE M Y+IEPR HY CMVDL+GR+GLL++A +++ MPM+ + +WG L+GAC +
Sbjct: 862 FETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYK 921
Query: 408 NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ++G AK L ELEP Y++LSNIY++ GLW++ RIR +MK + L + YS
Sbjct: 922 DTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYS 979
>gi|224143723|ref|XP_002325053.1| predicted protein [Populus trichocarpa]
gi|222866487|gb|EEF03618.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 169/454 (37%), Positives = 259/454 (57%), Gaps = 39/454 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHM------------------LHSYSAA------- 86
++ L++C ++ QL QI+A +R+ + LH + A
Sbjct: 23 NLLLQHLNECKDMSQLKQIHALSLRSTLPNHSTTLFLYSRILHFSSLHDLNYAYRVFDQV 82
Query: 87 -----FHWNNIIRLYTRLEA---PKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFAL 137
F WN +IR + ++ ++A+ +Y + R+ PD +T P VLKA LFAL
Sbjct: 83 DNPNSFMWNILIRACAQSQSVHLKREAILLYNTMLQRSSPFPDNHTFPFVLKACAYLFAL 142
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
G+Q H+ ++LG +S+ + + I Y+ G E A+ VFD+ P+R L SWNA+I
Sbjct: 143 FEGKQAHAHLLKLGFQSDVYINNSLIHFYASCGSLESAKNVFDKMPQRSLVSWNAMIDAF 202
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV--KSKQ 255
G + A+ +F+ ++ FEPD T+ SV +AC L L L + H ++ + S
Sbjct: 203 VLFGEFETALQLFVQFQQQFFEPDGYTIQSVINACAGLCALSLGMWAHAFLLRNCGVSVA 262
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ L+ NSL+DMY KCG +D+A ++F + + +V+SW SMI+G+A +G AL+CF
Sbjct: 263 RDHVLVNNSLLDMYCKCGSLDIATQIFEGMQKHDVTSWNSMILGFAMHGKGELALECFER 322
Query: 316 M-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M R S PN +TFVGVLSAC H V EG+ +F+MM N Y+IEP+ HYGC+VD+L RA
Sbjct: 323 MIRISRFVPNSITFVGVLSACNHRYMVNEGRKYFDMMVNEYKIEPQLEHYGCLVDILARA 382
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGA-CEKFGNVKMGEWVAKHLQELEPW-SDGAYVV 432
GL++EA +V MPMK +VVIW L+ + C+K +V++ E +A+ + E E S G YV+
Sbjct: 383 GLIDEALELVASMPMKPDVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVL 442
Query: 433 LSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
LS +YAS W +V +R +M + + K P SL
Sbjct: 443 LSRVYASASRWNDVGLVRKLMTNNGILKEPGCSL 476
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/489 (34%), Positives = 266/489 (54%), Gaps = 78/489 (15%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLH-----------------SYSAAFHWNN----- 91
++T + +C NL ++ I+ HI+++ +LH S A+F++ N
Sbjct: 22 LSTLIEQCKNLKEIKIIHTHILKSPILHTRDQYYLFTRLLYFCSFSNYASFNYANNVFHM 81
Query: 92 -----------IIRLYTRLEAPK------KALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
+IR Y +E KAL +Y M G++P+ T P ++K +L
Sbjct: 82 IKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFLVKGCSRL 141
Query: 135 -FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE------------ 181
+ +G +H+ ++ G ++ F + ISL+ G + ARKVFDE
Sbjct: 142 QYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSM 201
Query: 182 ------NPE-------------RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG----F 218
N E R + +WN+II GL Q G AKE++++F ++
Sbjct: 202 VVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVV 261
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
+PD +T+ SV SAC LG ++ VH Y+ K+ + D ++ +L++MYGKCG + A
Sbjct: 262 KPDKITIASVLSACALLGSIDHGKWVHAYL--RKNDIECDVVIGTALVNMYGKCGDVQQA 319
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
++F ++ + + S+WT+MI +A +G +A DCF M ++G++PNHVTFVG+LSAC H
Sbjct: 320 IEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHS 379
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V++G+ F++MK VY IEP+ HY CMVD+L RA L +EA ++ MPMK +V +WG
Sbjct: 380 GLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGA 439
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+G C+ GN+K+GE VA +L +LEP + Y+ L +IY G ++ +RIR MK R +
Sbjct: 440 LLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGI 499
Query: 459 -AKIPAYSL 466
KIP S+
Sbjct: 500 ETKIPGCSI 508
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 235/415 (56%), Gaps = 45/415 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y ++E +AL +Y M R GV P+ + ++ A + A+ G+Q H + V
Sbjct: 284 WGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIV 343
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
R G + +F ++ I Y+ G+ E+AR+
Sbjct: 344 RTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQ 403
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE PER + SW+++I+G SQ+ + A+ +F + G +P+++TMVSV SA +LG
Sbjct: 404 LFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGT 463
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLN-----SLIDMYGKCGRMDLAYKVFWEIDQ--PNV 290
L H+Y+ S+++ LN +LIDMY KCG + +A ++F+EI +V
Sbjct: 464 LMEGRWAHEYIL-------SNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSV 516
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
S W ++I G A +G AN +L F ++ I+PN +TF+GVLSAC H G V G+ +F+
Sbjct: 517 SPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKG 576
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
MKN+Y IEP HYGCM+DLLGRAG L+EA M+ MPMKA+VVIWG L+ AC GNV+
Sbjct: 577 MKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVE 636
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+GE A++L +L+ V+LSNIYA G W++ +R M+ + + K P S
Sbjct: 637 IGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGCS 691
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 64/304 (21%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ ++ M AGV+P+ TL V+ A + + R LH+L+ +LGLE+ + +
Sbjct: 167 EAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLV 226
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG---------------------- 201
+Y AR +FDE PER + +WN ++ G S+ G
Sbjct: 227 HMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGT 286
Query: 202 ---------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
R EA+ M+ + + G P++V +V + SACG + Q H + V+
Sbjct: 287 IIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGII--VR 344
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAY-------------------------------KV 281
+ + ++I Y CG ++LA+ ++
Sbjct: 345 TGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQL 404
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F E+ + +V SW+SMI GY+ N + AL FH M G++PN +T V V SA G +
Sbjct: 405 FDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTL 464
Query: 342 QEGK 345
EG+
Sbjct: 465 MEGR 468
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 152/370 (41%), Gaps = 95/370 (25%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK-------------- 168
TL LK+ L AL G+Q+HSL + GL SN F ++ IS Y K
Sbjct: 54 TLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTC 113
Query: 169 -----------------AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
+G + AR +F++ P + S+ ++ GL+Q+ EAI +F
Sbjct: 114 SVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFK 173
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++ G P++VT+ SV SA +G + +H F K ++ ++ +L+ MY
Sbjct: 174 DMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSF--KLGLEALNIVATNLVHMYCV 231
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN------------------------ 307
C + A +F EI + NV +W M+ GY+ +GL +
Sbjct: 232 CSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWGTIIDGY 291
Query: 308 -------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK----NVYQ 356
EAL + M +G+ PN V V ++SAC V EG+ F ++ + Y
Sbjct: 292 VQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYD 351
Query: 357 -IEPRFAHY-------------------------GCMVDLLGRAGLLEEARAMVEGMPMK 390
I+ H+ ++ R G++E+AR + + MP +
Sbjct: 352 FIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPER 411
Query: 391 ANVVIWGCLM 400
+V W ++
Sbjct: 412 -DVFSWSSMI 420
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W+++I Y++ E P AL ++ M GV P+ T+ V A L L GR H
Sbjct: 414 FSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEY 473
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAK 204
+ + N+ + I +Y+K G A ++F E +R + WNAII GL+ G A
Sbjct: 474 ILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHAN 533
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSAC---GSLGDLELALQVHKYVFQVKSKQKSDTLM 261
++ +F L++ +P+ +T + V SAC G + E + K ++ ++ K M
Sbjct: 534 VSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCM 593
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
ID+ G+ GR+ A ++ ++ + +V W +++ +G
Sbjct: 594 ----IDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHG 633
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 103/254 (40%), Gaps = 49/254 (19%)
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F G K ++T+VS +C SL L Q+H VF KS S+ + NSLI Y
Sbjct: 40 FNGNKDTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVF--KSGLLSNIFVKNSLISFY 97
Query: 270 GKC-------------------------------GRMDLAYKVFWEIDQPNVSSWTSMIV 298
KC G +D A +F ++ S+T+M++
Sbjct: 98 VKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCVSYTTMVM 157
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-----MKN 353
G A N EA+ F MR +G+ PN VT V+SA H G + + + ++
Sbjct: 158 GLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEA 217
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ + H C+ LG AR + + +P + NVV W ++ K G V +
Sbjct: 218 LNIVATNLVHMYCVCSSLG------NARVLFDEIPER-NVVTWNVMLNGYSKSGLVDL-- 268
Query: 414 WVAKHLQELEPWSD 427
A+ L E P D
Sbjct: 269 --ARDLFERIPAKD 280
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/441 (34%), Positives = 250/441 (56%), Gaps = 37/441 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL-----------EAPKK-- 104
+S CT++ + I+A +I++ +YS F + ++ +Y +L E P K
Sbjct: 129 ISSCTSVSYCSAIHARVIKSL---NYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDL 185
Query: 105 ------------------ALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
L+ + M + +G P+ TL V+ A + AL+ G+ LH
Sbjct: 186 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHG 245
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ V+LG+ + I++Y K G + A ++F+E P R L SWN+++ + +G A++
Sbjct: 246 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 305
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+D+F +K+ G PD TMV++ AC G A +H Y+ + +D ++ +L
Sbjct: 306 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIH--RCGFNADIIIATAL 363
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+++Y K GR++ + +F EI + +WT+M+ GYA + EA+ F M + G+ +H
Sbjct: 364 LNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 423
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +LSAC H G V+EGK +FE+M VY++EPR HY CMVDLLGR+G LE+A +++
Sbjct: 424 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 483
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + +WG L+GAC +GNV++G+ VA+ L L+P Y++LSNIY++ GLW +
Sbjct: 484 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRD 543
Query: 446 VERIRAVMKHRNLAKIPAYSL 466
++RA+MK R L + P S
Sbjct: 544 ASKVRALMKERRLTRNPGCSF 564
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 142/264 (53%), Gaps = 5/264 (1%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
T + H+ S AF ++I + K I+ S+ V+ + +SC +
Sbjct: 77 TSISHNRSFAFRHTDLIPKQFKRFNTNKGCCIFREASQFIVVYSIVQSLVFAISSCT--S 134
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+ +H+ ++ S+ F +S+Y K G E A+++FDE P + L SWN++++G
Sbjct: 135 VSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSG 194
Query: 197 LSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
LS G ++ F ++ + G +P++VT++SV SAC +G L+ +H V ++
Sbjct: 195 LSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSG 254
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
K+ ++NSLI+MYGK G +D A ++F E+ ++ SW SM+V + NG A + +D F+
Sbjct: 255 KAK--VVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNL 312
Query: 316 MRESGIRPNHVTFVGVLSACVHGG 339
M+ +GI P+ T V +L AC G
Sbjct: 313 MKRAGINPDQATMVALLRACTDTG 336
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 230/377 (61%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+H
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A +F+ P + + SWN +I G + KEA+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF I ++SSW +MI G+A +G A+ + D F MR+ GI+P+ +TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y++ P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYAS G W EV +
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 449 IRAVMKHRNLAKIPAYS 465
RA++ + + K+P S
Sbjct: 594 TRALLNDKGMKKVPGCS 610
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P VLK+ + A + G+Q+H +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER----------------------- 185
+LG + + + + IS+Y + G E A KVFD++P R
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 186 --------KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 282 IELGRQVHLWIDD--HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLK 398
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + + K+ N +I+G M
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 44/314 (14%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 143 LHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H + RL G+ + + I +Y+K GD E A +VF+ + L SWNA+I G +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
GRA + D+F ++K G +PDD+T V + SAC G L+L +++F+ ++
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG----RHIFRTMTQD----- 499
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
YK+ P + + MI +GL EA + +
Sbjct: 500 ------------------YKM-----TPKLEHYGCMIDLLGHSGLFKEAEE---MINMME 533
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEE 379
+ P+ V + +L AC G V+ G+ F E N+ +IEP Y + ++ AG E
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAE---NLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 380 ---ARAMVEGMPMK 390
RA++ MK
Sbjct: 591 VAKTRALLNDKGMK 604
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ +++GL + + S I + FE A VF E L WN + G
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T V +C + Q+H +V ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDL-- 167
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFW-------------------------------EID 286
D + SLI MY + GR++ A+KVF EI
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC G ++ G+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G LE A + E +P K +V+ W L+G
Sbjct: 288 VHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN+ W +M G+A + AL + M G+ PN TF VL +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 338 GGKVQEGK----HFFEM---------------------MKNVYQIEPRFAH-----YGCM 367
+EG+ H ++ +++ +++ + H Y +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ G +E A+ + + +P+K +VV W ++ + GN K
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGYAETGNYK 248
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/472 (33%), Positives = 249/472 (52%), Gaps = 63/472 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIR----------THMLHSYSA--------------------AF 87
L +C+N+ +L QI+ +++ + +L +Y++
Sbjct: 18 LERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTV 77
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR Y+ P++AL +Y M + + YT P +LKA L AL Q+H
Sbjct: 78 MWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQI 137
Query: 148 VRLGLESNEFCESGFISLYS-------------------------------KAGDFEKAR 176
++ G S + + + +Y+ K G+ E A
Sbjct: 138 IKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAY 197
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+F PE+ + SW ++I G + G KEA+ + + G +PD +T+ SAC LG
Sbjct: 198 KIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLG 257
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE +H Y+ K+K K D ++ +LIDMY KCG M A VF ++++ V +WT++
Sbjct: 258 ALEQGKWIHTYIG--KNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAI 315
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G+A +G +EALD F M+++GI+P TF VL+AC H G V+EGK FE M Y
Sbjct: 316 IGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYN 375
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
++P HYGCMVDLLGRAG L+EA+ VE MP+K N IWG L+ AC ++++G+ +
Sbjct: 376 MKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIG 435
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
K L EL+P DG Y+ L++I+A+ G W+E ++R+ +K++ L +P S T
Sbjct: 436 KFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTIT 487
>gi|356518836|ref|XP_003528083.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 568
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/388 (40%), Positives = 229/388 (59%), Gaps = 22/388 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS-----CQLFALEIGR 141
F +N +IR + L AP AL ++ M R V D +T P++LK+S C
Sbjct: 65 FPYNAVIR-HVALHAPSLALALFSHMHRTNVPFDHFTFPLILKSSKLNPHC--------- 114
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H+L ++LG SN + ++ I+ Y +G + K+FDE P R L SW+++I+ ++ G
Sbjct: 115 -IHTLVLKLGFHSNIYVQNALINSYGTSGSLHASLKLFDEMPRRDLISWSSLISCFAKRG 173
Query: 202 RAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
EA+ +F + LK+ PD V M+SV SA SLG LEL + VH ++ ++ T
Sbjct: 174 LPDEALTLFQQMQLKESDILPDGVVMLSVISAVSSLGALELGIWVHAFISRIGVNL---T 230
Query: 260 LMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ L S LIDMY +CG +D + KVF E+ NV +WT++I G A +G EAL+ F+ M E
Sbjct: 231 VSLGSALIDMYSRCGDIDRSVKVFDEMPHRNVVTWTALINGLAVHGRGREALEAFYDMVE 290
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
SG++P+ + F+GVL AC HGG V+EG+ F M + Y IEP HYGCMVDLLGRAG++
Sbjct: 291 SGLKPDRIAFMGVLVACSHGGLVEEGRRVFSSMWSEYGIEPALEHYGCMVDLLGRAGMVL 350
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA VEGM ++ N VIW L+GAC + + E + ++EL+P DG YV+LSN Y
Sbjct: 351 EAFDFVEGMRVRPNSVIWRTLLGACVNHNLLVLAEKAKERIKELDPHHDGDYVLLSNAYG 410
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G W + E +R M+ + K P SL
Sbjct: 411 GVGNWVKKEGVRNSMRESKIVKEPGLSL 438
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/382 (39%), Positives = 232/382 (60%), Gaps = 12/382 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +IR Y+R + P++A+ +Y+ M G+ P + +T P +L + +L +LE G ++HS
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ G ES+ F + I LYS G+ AR +FDE+ R L S+N +I G ++ + + A+
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV-HKYVFQVKSKQKSDTLMLNSLI 266
+F ++ D+VT+V+V SAC LG +L ++ H+Y+ Q +T++ +++
Sbjct: 122 CLFGEMQN----SDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ--NTILTAAVM 175
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSS---WTSMIVGYAANGLANEALDCFHYMRESGIRP 323
DMY KCG +D A ++F + + N+ + + SMI G A +GL A+ F + +G++P
Sbjct: 176 DMYAKCGSIDSALEIFRRVGK-NMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKP 234
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ VTFVGVL AC H G ++EGK FE M N Y I+P+ HYGCMVDLLGR G LEEA +
Sbjct: 235 DEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDL 294
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
V+ MP +AN VIW L+ AC GNVK+GE + L E+E YV+LSNI A W
Sbjct: 295 VQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQW 354
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
EE ++R VM+ + K P +S
Sbjct: 355 EEARQVRKVMEDHGIRKPPGWS 376
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 219/380 (57%), Gaps = 3/380 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +I Y R + P +AL+++ M R+ + +T+ L A+ + L IG+++H
Sbjct: 168 FSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHG 227
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R GL+S+E S +Y K G E+AR +FD+ +R + +W A+I QDGR KE
Sbjct: 228 YIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKE 287
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
D+F L + G P++ T V +AC + EL +VH Y+ +V S ++L
Sbjct: 288 GFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFS--FAASAL 345
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG M A +VF E QP++ SWTS+I GYA NG +EA+ F + +SG +P+H
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDH 405
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFVGVLSAC H G V +G +F +K Y + HY C++DLL R+G +EA ++
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIIS 465
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M MK + +W L+G C GN+K+ + A+ L E+EP + YV L+NIYA+ G+W E
Sbjct: 466 KMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSE 525
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +IR M R + K P S
Sbjct: 526 VAKIRKTMDDRGVVKKPGLS 545
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 147/322 (45%), Gaps = 36/322 (11%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P ++++ + L+ G+++H G F + + +Y+K ++K+
Sbjct: 68 PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKL 127
Query: 179 FDENPERKLGSWNAIIAGLSQDG-------------------------------RAKEAI 207
FDE PER L SWN +I+G ++ G R EA+
Sbjct: 128 FDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEAL 187
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++F +K+ + + T+ S +A ++ L + ++H Y+ +++ SD ++ ++L
Sbjct: 188 ELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYI--MRTGLDSDEVVWSALS 245
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCG ++ A +F ++ ++ +WT+MI Y +G E D F + SGIRPN
Sbjct: 246 DMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEF 305
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF GVL+AC + + GK M V +P +V + + G + A + +
Sbjct: 306 TFSGVLNACANQTSEELGKKVHGYMTRV-GFDPFSFAASALVHMYSKCGNMVSAERVFKE 364
Query: 387 MPMKANVVIWGCLMGACEKFGN 408
P + ++ W L+ + G
Sbjct: 365 TP-QPDLFSWTSLIAGYAQNGQ 385
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/436 (35%), Positives = 235/436 (53%), Gaps = 9/436 (2%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHW 89
+ + + A D A +AT +KC L Y + M S W
Sbjct: 234 NYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLE-----YGLTLFEKM--SMRDVVSW 286
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
II ++ + A+ +I M + V P+ YT V+ L +E G QLH+L +
Sbjct: 287 TTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH 346
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LGL ++ E+ +++Y+K G + +F E R + SW+ IIAG SQ G EA ++
Sbjct: 347 LGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFEL 406
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
++ G +P + + SV SACG++ LE Q+H YV + + + ++L++LI+MY
Sbjct: 407 LSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTA--MVLSALINMY 464
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG ++ A ++F + ++ SWT+MI GYA +G + E +D F + G+RP+ VTF+
Sbjct: 465 CKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFI 524
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
GVLSAC H G V G +F M YQI P HYGCM+DLL RAG L +A M+E MP
Sbjct: 525 GVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPF 584
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ V+W L+ AC G+V+ G A+ + +LEP G ++ L+NIYAS+G W E I
Sbjct: 585 HRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADI 644
Query: 450 RAVMKHRNLAKIPAYS 465
R +MK + + K P +S
Sbjct: 645 RKLMKSKGVIKEPGWS 660
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 4/319 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II R K+AL + M R+ V D YT I LKA AL GR++H+ A+
Sbjct: 185 WTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + F + ++Y+K G E +F++ R + SW II L Q G+ + A+
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
FI +++ P++ T +V S C +L +E Q+H + + + + NS++ M
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHL--GLAASLSVENSIMTM 362
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +F E+ + ++ SW+++I GY+ G +EA + +MR G +P
Sbjct: 363 YAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFAL 422
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC + ++ GK + ++ +E ++++ + G +EEA + +
Sbjct: 423 ASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFDAAE 481
Query: 389 MKANVVIWGCLMGACEKFG 407
++V W ++ + G
Sbjct: 482 -NDDIVSWTAMINGYAEHG 499
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 149/322 (46%), Gaps = 5/322 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W +I Y +AL ++ M +G+ D + L + KA + G LH A
Sbjct: 83 WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL ++ F S + +Y+K G + R+VF E P R + SW AII GL + G KEA+
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F + + E D T AC G L ++H +K + + N+L
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA--MKKGFDVSSFVANTLAT 260
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG+++ +F ++ +V SWT++I G A+ F MRES + PN T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F V+S C + +++ G+ ++ ++ + + ++ + + G L + + M
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHL-GLAASLSVENSIMTMYAKCGQLTSSSVIFHEM 379
Query: 388 PMKANVVIWGCLMGACEKFGNV 409
+ ++V W ++ + G+V
Sbjct: 380 TRR-DIVSWSTIIAGYSQGGHV 400
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMV 226
K G AR++FD+ ++ SW +I+G + EA+ +F ++ + G D +
Sbjct: 61 KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
ACG D+ +H Y VK+ + + ++L+DMY K G++ +VF E+
Sbjct: 121 LAHKACGLNSDVNYGELLHGYA--VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP 178
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
NV SWT++I G G EAL F M S + + TF L AC G + G+
Sbjct: 179 MRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGRE 238
Query: 347 FF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ MK + + A+ + + + G LE + E M M+ +VV W ++ +
Sbjct: 239 IHAQAMKKGFDVSSFVAN--TLATMYNKCGKLEYGLTLFEKMSMR-DVVSWTTIITTLVQ 295
Query: 406 FGN 408
G
Sbjct: 296 MGQ 298
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/407 (36%), Positives = 232/407 (57%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC NL +++ + T ++ W + I Y R A+ ++ M GV
Sbjct: 617 SKCGNLNGATEVFVKMGDTTIVS-------WTSTIAAYVREGLYSDAIGLFDEMQSKGVR 669
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+ ++ A +L+ GR +HS ++ G+ SN + I++Y+K G E+AR V
Sbjct: 670 PDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLV 729
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + P + + SWN +I G SQ+ EA+++F+ ++K F+PDD+TM V AC L L
Sbjct: 730 FSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAAL 788
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H ++ ++ SD + +L+DMY KCG + LA +F I + ++ SWT MI
Sbjct: 789 DKGREIHGHI--LRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIA 846
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G NEA+ F+ MR +GI P+ +F +L+AC H G + EG FF M+N +E
Sbjct: 847 GYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVE 906
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY C+VDLL R G L +A +E MP+K + IWG L+ C +VK+ E VA+H
Sbjct: 907 PKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH 966
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + YVVL+N+YA WEEV+++R M+ R + P S
Sbjct: 967 IFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 1013
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 179/343 (52%), Gaps = 13/343 (3%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C +L+Q +I+ I+ + F WN ++ Y ++ ++++ ++ M + GV+ +
Sbjct: 417 CGDLVQGRKIFDKIMNDKV-------FLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGN 469
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
CYT VLK L ++ +++H ++LG SN + I+ Y K G E A +FD
Sbjct: 470 CYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFD 529
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
E E + SWN++I G +G + +++FI + G E D T+VSV A ++G+L L
Sbjct: 530 ELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSL 589
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+H F VK+ + + N+L+DMY KCG ++ A +VF ++ + SWTS I Y
Sbjct: 590 GRALHG--FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY 647
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEP 359
GL ++A+ F M+ G+RP+ T ++ AC + +G+ ++KN +
Sbjct: 648 VREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN--GMGS 705
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++++ + G +EEAR + +P+K ++V W ++G
Sbjct: 706 NLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 141/278 (50%), Gaps = 8/278 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL+ + +LE G+++HS+ + G+ +E + + +Y GD + RK+FD+ K
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +++ ++ G +E++ +F ++K G + T V +LG ++ +VH
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHG 494
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
YV ++ S+T ++NSLI Y K G ++ A+ +F E+ +P+V SW SMI G NG +
Sbjct: 495 YVLKLGF--GSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFS 552
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHY 364
L+ F M G+ + T V VL A + G + G+ H F +K + E F++
Sbjct: 553 GNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFG-VKACFSEEVVFSN- 610
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++D+ + G L A + M +V W + A
Sbjct: 611 -TLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTSTIAA 646
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 223/377 (59%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y +KALD++ M +G+LPD TL +L A L L++GR +H +
Sbjct: 200 WSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVY 259
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ + F + + +Y K + E AR +FD+ PER L +W +I G ++ G A E++
Sbjct: 260 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G PD V MV+V AC LG + A + Y+ + K + D ++ ++IDM
Sbjct: 320 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYI--QRKKFQLDVILGTAMIDM 377
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG ++ A ++F +++ NV SW++MI Y +G +ALD F M SGI PN +T
Sbjct: 378 HAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 437
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V +L AC H G V+EG FF +M Y + HY C+VDLLGRAG L+EA ++E M
Sbjct: 438 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 497
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + +WG +GAC +V + E A L EL+P + G Y++LSNIYA+ G WE+V +
Sbjct: 498 VEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAK 557
Query: 449 IRAVMKHRNLAKIPAYS 465
R +M R L KIP ++
Sbjct: 558 TRDLMSQRRLKKIPGWT 574
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 167/297 (56%), Gaps = 8/297 (2%)
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
R G PD YTLP V++A L L++GR +H + + GL+ + F + + +Y K + E
Sbjct: 23 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIE 82
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR +FD+ ER L +W +I G ++ G+A E++ +F +++ G PD V MV+V AC
Sbjct: 83 DARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACA 142
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG + A + Y+ + K + D ++ ++IDMY KCG ++ A ++F +++ NV SW
Sbjct: 143 KLGAMHKARIIDDYI--QRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISW 200
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI Y +G +ALD F M SG+ P+ +T +L AC +Q G+ +
Sbjct: 201 SAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI--- 257
Query: 354 VYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
VY+ H+ C +VD+ G+ +E+AR + + MP + ++V W ++G + GN
Sbjct: 258 VYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPER-DLVTWTVMIGGYAECGN 313
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 163/315 (51%), Gaps = 6/315 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y ++L ++ M GV+PD + V+ A +L A+ R +
Sbjct: 99 WTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQ 158
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + + + I +Y+K G E AR++FD E+ + SW+A+IA G+ ++A+D
Sbjct: 159 RKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 218
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G PD +T+ S+ AC L +L++ +H V+ K D + +L+DM
Sbjct: 219 LFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVY--KFGLDLDHFVCAALVDM 276
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC ++ A +F ++ + ++ +WT MI GYA G ANE+L F MRE G+ P+ V
Sbjct: 277 YGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAM 336
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V V+ AC G + + + + + + +Q++ M+D+ + G +E AR + + M
Sbjct: 337 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVESAREIFDRM 394
Query: 388 PMKANVVIWGCLMGA 402
K NV+ W ++ A
Sbjct: 395 EEK-NVISWSAMIAA 408
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 6/211 (2%)
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
++ G ++ G F L +CG PD+ T+ V AC L +L++ +H V+ K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY--K 58
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
D + +L+DMY KC ++ A +F ++ + ++ +WT MI GYA G ANE+L
Sbjct: 59 FGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLL 371
F MRE G+ P+ V V V+ AC G + + + + + + +Q++ M+D+
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMY 176
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G +E AR + + M K NV+ W ++ A
Sbjct: 177 AKCGCVESAREIFDRMEEK-NVISWSAMIAA 206
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 267/486 (54%), Gaps = 37/486 (7%)
Query: 7 GISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHE-------------DPAKI 53
G S+ +LR SS L TF I + S+ LD H +P
Sbjct: 131 GDSVEALRAFSSMRKLSLKPNRSTFP--CAIKSCSALLDLHSGRQAHQQALIFGFEPDLF 188
Query: 54 VATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
V++ L SKC L ++ I S+ W ++I Y + + +AL ++
Sbjct: 189 VSSALVDMYSKCGELRDARTLFDEI-------SHRNIVSWTSMITGYVQNDDAHRALLLF 241
Query: 110 --IFMSRAG------VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
+ +G V D + VL A ++ I +H ++ G E + E+
Sbjct: 242 KEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENT 301
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEP 220
+ Y+K G+ +R+VFD ER + SWN+IIA +Q+G + E++++F + K G
Sbjct: 302 LMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 361
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
+ VT+ +V AC G L +H V +K +S+ + S+IDMY KCG++++A K
Sbjct: 362 NAVTLSAVLLACAHSGSQRLGKCIHDQV--IKMGLESNVFVGTSIIDMYCKCGKVEMARK 419
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
F + + NV SW++M+ GY +G A EAL+ F+ M +G++PN++TFV VL+AC H G
Sbjct: 420 AFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 479
Query: 341 VQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++EG H+F+ M + + +EP HYGCMVDLLGRAG L+EA +++GM ++ + V+WG L+
Sbjct: 480 LEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
Query: 401 GACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
GAC NV +GE A+ L EL+P + G YV+LSNIYA G WE+VER+R +MK+ L K
Sbjct: 540 GACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVK 599
Query: 461 IPAYSL 466
P +SL
Sbjct: 600 PPGFSL 605
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 166/336 (49%), Gaps = 13/336 (3%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
+ F WN++I R +AL + M + + P+ T P +K+ L L GRQ
Sbjct: 115 TNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQA 174
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H A+ G E + F S + +YSK G+ AR +FDE R + SW ++I G Q+ A
Sbjct: 175 HQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDA 234
Query: 204 KEAIDMF--IGLKKCGFEPDD------VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
A+ +F +++ G E D + MVSV SAC + + + VH F +K
Sbjct: 235 HRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHG--FLIKRGF 292
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D + N+L+D Y KCG + ++ +VF + + +V SW S+I YA NG++ E+++ FH
Sbjct: 293 EGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352
Query: 316 MRESG-IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M + G I N VT VL AC H G + GK + + + +E ++D+ +
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKM-GLESNVFVGTSIIDMYCKC 411
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G +E AR + M K NV W ++ G+ K
Sbjct: 412 GKVEMARKAFDRMREK-NVKSWSAMVAGYGMHGHAK 446
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+D+ NV SW S+I A +G + EAL F MR+ ++PN TF + +C + G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + ++ EP +VD+ + G L +AR + + + + N+V W ++
Sbjct: 172 RQAHQQAL-IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR-NIVSWTSMI 225
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 229/409 (55%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y R++ KK+ ++I M + GV P+ TL ++L A +L LE G+ ++
Sbjct: 176 WNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYIN 235
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA-------------------------------RK 177
+E N E+ I +++ G+ ++A RK
Sbjct: 236 GGIVERNLILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARK 295
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ PER SW A+I G + R EA+ +F ++ +PD+ TMVS+ +AC LG
Sbjct: 296 YFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGA 355
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL V Y+ K+ K+DT + N+LIDMY KCG + A KVF E+ + +WT+MI
Sbjct: 356 LELGEWVKTYI--DKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMI 413
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
VG A NG EAL F M E+ I P+ +T++GVL AC H G V++G+ FF M + I
Sbjct: 414 VGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGI 473
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HYGCMVDLLGRAG LEEA ++ MP+K N ++WG L+GAC NV++ E AK
Sbjct: 474 KPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAK 533
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ ELEP + YV+L NIYA+ WE + ++R +M R + K P SL
Sbjct: 534 QILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSL 582
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 63/349 (18%)
Query: 58 LSKCTNLLQLNQIYAHIIRT----------------------HMLHSYS--------AAF 87
L KC ++ QL QI++H I+ M+++ F
Sbjct: 14 LEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLF 73
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I+ Y+R+ P+ + +Y+ M + + PD +T P +LK + AL+ G+ L + A
Sbjct: 74 IWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHA 133
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ G +SN F + FI ++S + ARKVFD ++ +WN +++G ++ + K++
Sbjct: 134 VKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSK 193
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+FI ++K G P+ VT+V + SAC L DLE ++KY+ + + ++ N LID
Sbjct: 194 MLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI--NGGIVERNLILENVLID 251
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN-------------------- 307
M+ CG MD A VF + +V SWTS++ G+A G +
Sbjct: 252 MFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAM 311
Query: 308 -----------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
EAL F M+ S ++P+ T V +L+AC H G ++ G+
Sbjct: 312 IDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGE 360
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 125 PIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDE 181
PI L C+ ++ L +Q+HS +++GL S+ + I+ ++G AR+VFD
Sbjct: 10 PISLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDA 66
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P+ L WN +I G S+ + + M++ + +PD T + +A
Sbjct: 67 IPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTR----NMA 122
Query: 242 LQVHKYVFQ--VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
LQ K + VK S+ + + I M+ C +DLA KVF D V +W M+ G
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y ++ F M + G+ PN VT V +LSAC ++ GKH ++ + N +E
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYI-NGGIVER 241
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
++D+ G ++EA+++ + M + +V+ W ++ G + + +
Sbjct: 242 NLILENVLIDMFAACGEMDEAQSVFDNMKNR-DVISWTSIVTGFANIGQIDLARKYFDQI 300
Query: 420 QELE--PWS---DGAYVVLSNIYASRGLWEEVE 447
E + W+ DG Y+ ++ + L+ E++
Sbjct: 301 PERDYVSWTAMIDG-YLRMNRFIEALALFREMQ 332
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 238/424 (56%), Gaps = 11/424 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD + + T ++C + +++ I + ++ WN++I Y+++
Sbjct: 158 LDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS-------WNSMISGYSKMRHAG 210
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ ++ M AG P+ +L VL A +L L++G + V + N F S I
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y K GD AR++FD ++ +WNA+I G +Q+G ++EAI +F ++ PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T++ + SAC S+G L+L QV ++ + + D + +L+DMY KCG +D A++VF+
Sbjct: 331 TLIGILSACASIGALDLGKQVE--IYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNHVTFVGVLSACVHGGKV 341
+ + N SW +MI A +G A EAL F M G + PN +TFVGVLSACVH G V
Sbjct: 389 GMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLV 448
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG+ F MM + + + P+ HY CMVDL RAG LEEA V MP K + VI G L+G
Sbjct: 449 DEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC+K N+ + E V K L ELEP + G YV+ S +YA+ W++ R+R +MK + ++K
Sbjct: 509 ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568
Query: 462 PAYS 465
P S
Sbjct: 569 PGCS 572
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 201/383 (52%), Gaps = 39/383 (10%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH---------------SYSAAF----------HWNNI 92
L +C ++ QL QI+A ++ T+ +H +Y++ F +N +
Sbjct: 39 LQQCLSIKQLKQIHAQLL-TNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVM 97
Query: 93 IR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
IR L T AL+ Y M G+ P+ T P + A L A+E GR H +R G
Sbjct: 98 IRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRG 157
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L+ + I++Y++ G ARKVFDE ++ L SWN++I+G S+ A EA+ +F
Sbjct: 158 LDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFR 217
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + GF+P+++++VSV ACG LGDL+L V ++V V++K + M ++LI MYGK
Sbjct: 218 EMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV--VENKMTLNYFMGSALIHMYGK 275
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + A ++F + + + +W +MI GYA NG++ EA+ F MR S P+ +T +G+
Sbjct: 276 CGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGI 335
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRF---AHYG-CMVDLLGRAGLLEEARAMVEGM 387
LSAC G + GK +Y E F + G +VD+ + G L+ A + GM
Sbjct: 336 LSACASIGALDLGKQV-----EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 388 PMKANVVIWGCLMGACEKFGNVK 410
P K N V W ++ A G +
Sbjct: 391 P-KKNEVSWNAMISALAFHGQAQ 412
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/409 (37%), Positives = 231/409 (56%), Gaps = 32/409 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
W +I Y + ++A++++ M + V P+ TL V+ A + LE+G+++H
Sbjct: 326 WTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE 385
Query: 145 ------SLAVRLGL---------------------ESNEFCESGFISLYSKAGDFEKARK 177
SL++ L + + + ++ Y+K GD E AR+
Sbjct: 386 EKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARR 445
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ P + W+A+IAG SQ+ + KE++ +F + + G P + T+VSV SACG L
Sbjct: 446 FFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTC 505
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L L +H+Y K S TL N+++DMY KCG +D A +VF + + N+ SW +MI
Sbjct: 506 LNLGDWIHQYFVVGKIIPLSVTLE-NAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMI 564
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GYAANG A +A++ F MR G PN++TFV +L+AC HGG + EG+ +F+ M+ Y I
Sbjct: 565 AGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGI 624
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HY CMVDLLGR GLLEEA ++ MPM+ WG L+ AC GNV++ A
Sbjct: 625 KPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAH 684
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+L L+P G YV+L+N A+ W +V R+R++MK + + KIP YSL
Sbjct: 685 NLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSL 733
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 38/372 (10%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH I + F WN +IR Y P A +++M + V D + LKA
Sbjct: 209 YAHTIFNRV--EQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKA 266
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
Q + G ++ + ++G + +G I Y++ G + AR+VFDE+ ++ + +W
Sbjct: 267 CQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTW 326
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+I G + ++EA+++F + EP++VT+++V SAC +G+LE+ +VH+ +
Sbjct: 327 TTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHE---K 383
Query: 251 VKSKQKSDTLML-NSLIDMY-------------------------------GKCGRMDLA 278
V+ K +L L N+L+DMY KCG ++ A
Sbjct: 384 VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 443
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
+ F + + N W++MI GY+ N E+L FH M E G+ P T V VLSAC
Sbjct: 444 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 503
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
+ G + I +VD+ + G ++ A + MP + N++ W
Sbjct: 504 TCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER-NLISWNT 562
Query: 399 LMGACEKFGNVK 410
++ G K
Sbjct: 563 MIAGYAANGRAK 574
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 33/182 (18%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A+ +F ++QPN W +MI GY A F YM + + + +FV L
Sbjct: 205 GDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFAL 264
Query: 333 SACVHGGKVQEGK----------------------HFFE---MMKNVYQI-----EPRFA 362
AC V EG+ HF+ ++KN Q+ +
Sbjct: 265 KACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVV 324
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+ M+D EEA + E M + + N V ++ AC GN++MG+ V + +
Sbjct: 325 TWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 384
Query: 420 QE 421
+E
Sbjct: 385 EE 386
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 228/385 (59%), Gaps = 12/385 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y KKAL+++ M + V PD T+ V+ A Q ++E+GRQ+HS
Sbjct: 175 WNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWIN 234
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A ++ + + + SWN +I G + KEA+
Sbjct: 235 DHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALL 294
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN----- 263
+F + + G P+DVTM+S+ AC LG +++ +H Y+ K+ ++ N
Sbjct: 295 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI----DKKLKGVVVTNASSLR 350
Query: 264 -SLIDMYGKCGRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
SLIDMY KCG +D A +V ++S+W +MI G+A +G AN A D F MR++GI
Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI 410
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P+ +TFVG+LSAC H G + G++ F M+ Y I P+ HYGCM+DLLG +GL +EA
Sbjct: 411 EPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAE 470
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
M+ MPM+ + VIW L+ AC+ GN+++GE AK L ++EP + G+YV+LSNIYA+ G
Sbjct: 471 EMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAG 530
Query: 442 LWEEVERIRAVMKHRNL-AKIPAYS 465
W EV +IR ++ + + K+P S
Sbjct: 531 KWNEVXKIRTLLNDKGMKKKVPGCS 555
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 172/347 (49%), Gaps = 38/347 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ +T P +LK+ + + G+Q+H +
Sbjct: 43 WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVL 102
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
+LG + + + + IS+Y++ G E A+KVFD
Sbjct: 103 KLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQK 162
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
E P + + SWNA+I+G ++ G K+A+++F + K +PD+ TM +V SAC G
Sbjct: 163 MFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGS 222
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A ++ + +V SW ++I
Sbjct: 223 IELGRQVHSWIND--HGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLI 280
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF--EMMKN 353
GY L EAL F M SG PN VT + +L AC H G + G+ H + + +K
Sbjct: 281 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 340
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
V + + ++D+ + G ++ A + + ++ W ++
Sbjct: 341 VV-VTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMI 386
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 35/259 (13%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A VF+ PE WN + G + A+ +++ + G P+ T + +C
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW----------- 283
+ Q+H +V ++ D + SLI MY + GR++ A KVF
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDL--DLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYT 145
Query: 284 --------------------EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
EI +V SW +MI GYA G +AL+ F M ++ ++P
Sbjct: 146 ALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKP 205
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ T V+SAC G ++ G+ + N + ++DL + G +E A +
Sbjct: 206 DESTMATVVSACAQSGSIELGRQVHSWI-NDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 384 VEGMPMKANVVIWGCLMGA 402
+EG+ K +V+ W L+G
Sbjct: 265 LEGLSNK-DVISWNTLIGG 282
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 243/439 (55%), Gaps = 38/439 (8%)
Query: 62 TNLLQLNQI-YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
+LLQ+ I YAH + + F +N +I+ Y+ + +Y M G P+
Sbjct: 24 VSLLQIPSIPYAHKLFDFI--PKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPN 81
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
++ + A L + + GR LH+ V+ G + F + + +Y+K G ARK FD
Sbjct: 82 EHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFD 141
Query: 181 EN-------------------------------PERKLGSWNAIIAGLSQDGRAKEAIDM 209
E P R + SW A+I+G +Q+G+ +A+ M
Sbjct: 142 EMTVRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSM 201
Query: 210 FIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ +++ P++VT+ SV AC +LG LE+ ++ V+ + + + N+L++M
Sbjct: 202 FLMMEEETEMRPNEVTLASVLPACANLGALEVGERIE--VYARGNGYFKNLYVSNALLEM 259
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y +CGR+D A+ VF EID + N+ SW SMI+G A +G +EA++ F+ M G P+ VT
Sbjct: 260 YARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVT 319
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVL AC HGG V EG+HFFE M+ + I P+ HYGCMVDLLGRAG L EA ++ M
Sbjct: 320 FVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRM 379
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ + V+WG L+GAC G+V++ E A L ELEP + G YV+LSNIYA+ G W+ V
Sbjct: 380 PMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVA 439
Query: 448 RIRAVMKHRNLAKIPAYSL 466
R+R +MK + K YS
Sbjct: 440 RLRKLMKGGKITKAAGYSF 458
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 237/424 (55%), Gaps = 11/424 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD + + T ++C + +++ I + ++ WN++I Y+++
Sbjct: 158 LDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS-------WNSMISGYSKMRHAG 210
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ ++ M AG P+ +L VL A +L L++G + V + N F S I
Sbjct: 211 EAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALI 270
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y K GD AR++FD ++ +WNA+I G +Q+G ++EAI +F ++ PD +
Sbjct: 271 HMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQI 330
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T++ + SAC S+G L+L QV ++ + + D + +L+DMY KCG +D A++VF+
Sbjct: 331 TLIGILSACASIGALDLGKQVE--IYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNHVTFVGVLSACVHGGKV 341
+ N SW +MI A +G A EAL F M G + PN +TFVGVLSACVH G V
Sbjct: 389 GMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLV 448
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG+ F MM + + + P+ HY CMVDL RAG LEEA V MP K + VI G L+G
Sbjct: 449 DEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLG 508
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC+K N+ + E V K L ELEP + G YV+ S +YA+ W++ R+R +MK + ++K
Sbjct: 509 ACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKT 568
Query: 462 PAYS 465
P S
Sbjct: 569 PGCS 572
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 201/383 (52%), Gaps = 39/383 (10%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH---------------SYSAAF----------HWNNI 92
L +C ++ QL QI+A ++ T+ +H +Y++ F +N +
Sbjct: 39 LQQCLSIKQLKQIHAQLL-TNSIHKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVM 97
Query: 93 IR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
IR L T AL+ Y M G+ P+ T P + A L A+E GR H +R G
Sbjct: 98 IRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRG 157
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L+ + I++Y++ G ARKVFDE ++ L SWN++I+G S+ A EA+ +F
Sbjct: 158 LDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFR 217
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + GF+P+++++VSV ACG LGDL+L V ++V V++K + M ++LI MYGK
Sbjct: 218 EMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFV--VENKMTLNYFMGSALIHMYGK 275
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + A ++F + + + +W +MI GYA NG++ EA+ F MR S P+ +T +G+
Sbjct: 276 CGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGI 335
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRF---AHYG-CMVDLLGRAGLLEEARAMVEGM 387
LSAC G + GK +Y E F + G +VD+ + G L+ A + GM
Sbjct: 336 LSACASIGALDLGKQV-----EIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGM 390
Query: 388 PMKANVVIWGCLMGACEKFGNVK 410
P K N V W ++ A G +
Sbjct: 391 PNK-NEVSWNAMISALAFHGQAQ 412
>gi|357111691|ref|XP_003557645.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Brachypodium distachyon]
Length = 598
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 216/383 (56%), Gaps = 8/383 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F N ++R++ P+ AL ++ R PD +T P +L+A +L AL G LH+
Sbjct: 91 FSLNTVLRIFASSARPRVALALH---RRHLAPPDTHTYPPLLQACARLLALRYGEGLHAE 147
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE--NPERKLGSWNAIIAGLSQDGRAK 204
A + GL S F ++ + LY G FE A +VFDE PER L SWN+++ G + +GR
Sbjct: 148 ACKNGLVSLVFVKNSLVHLYGACGLFESAHRVFDEIPPPERNLVSWNSVLNGFAANGRPN 207
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
E + +F + + F PD T+VSV +AC +G L L +VH VF K + N+
Sbjct: 208 EVLTVFREMLEVEFAPDGFTVVSVLTACAEIGVLALGRRVH--VFVAKVGLVGNAHAGNA 265
Query: 265 LIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
LID+Y KCG +D A K+F E+ V SWTS+IVG A NG +AL F M + P
Sbjct: 266 LIDLYAKCGGVDDARKMFGEMGVGRTVVSWTSLIVGLAVNGFGMDALQLFSMMEREKLMP 325
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T VGVL AC H G V +G +F+ MK Y I PR H GCMVDLLGRAG +EEA
Sbjct: 326 TEITMVGVLYACSHCGLVDDGFRYFDQMKAEYGITPRIEHLGCMVDLLGRAGRVEEAHNY 385
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ MP++ N V+W L+GAC +++GE L EL+P G YV+LSN+YA G W
Sbjct: 386 ITTMPLEPNAVVWRTLLGACAMHKKLEIGEAAWARLVELDPGHSGDYVLLSNLYAGVGRW 445
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
+V +R M + K P +SL
Sbjct: 446 ADVHVLRKTMVTHGVRKNPGHSL 468
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 228/410 (55%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I Y R P++AL+++ + G V PD T+ + Q+ LE+G++LH
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEF 249
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE-------------------------------KA 175
G+ + + +Y K G E A
Sbjct: 250 VDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDA 309
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R +FDE PER + WNA++AG Q+ + KEAI +F +++ +P+++TMV++ SAC L
Sbjct: 310 RMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQL 369
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + VH Y+ + + + SL+DMY KCG + A +F EI N +WT+
Sbjct: 370 GALEMGMWVHHYI--DRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTA 427
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI G A +G A+EA++ F M + G++P+ +TF+GVLSAC H G V+EG+ FF +M Y
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKY 487
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+E + HY CM+DLLGRAG L+EA +V MPM + V+WG L AC GN+ +GE
Sbjct: 488 HLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKA 547
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L EL+P G YV+L+N+YA + ++ +++R +M+H + K+P S
Sbjct: 548 AMKLVELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCS 597
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 164/327 (50%), Gaps = 45/327 (13%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T P +LKA +L G + +LG ++ F + + +S +G AR++
Sbjct: 119 PDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLARRL 178
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLG 236
FDE+P R + SWN +I G + G +EA+++F L + G PD+VTM+ S C +G
Sbjct: 179 FDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMG 238
Query: 237 DLELALQVHKYVFQVKSKQKSDTL-MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
DLEL ++H++ V SK T+ ++N+++DMY KCG ++LA VF ID V SWT+
Sbjct: 239 DLELGKRLHEF---VDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTT 295
Query: 296 MIVGYAANGL-------------------------------ANEALDCFHYMRESGIRPN 324
MIVG+A G+ EA+ FH M+ES + PN
Sbjct: 296 MIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPN 355
Query: 325 HVTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+T V +LSAC G ++ G H+ + +Q+ A +VD+ + G +++A
Sbjct: 356 EITMVNLLSACSQLGALEMGMWVHHYIDR----HQLYLSVALGTSLVDMYAKCGNIKKAI 411
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + +P K N + W ++ G+
Sbjct: 412 CIFKEIPDK-NALTWTAMICGLANHGH 437
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + + K+A+ ++ M + V P+ T+ +L A QL ALE+G +H
Sbjct: 322 FPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHY 381
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
R L + + + +Y+K G+ +KA +F E P++ +W A+I GL+ G A EA
Sbjct: 382 IDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEA 441
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-----LALQVHKYVFQVKSKQKSDTLM 261
I+ F + G +PD++T + V SAC G ++ +L KY + K K S
Sbjct: 442 IEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYS---- 497
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ID+ G+ G +D A ++ + P+ W ++ +G
Sbjct: 498 --CMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHG 539
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/380 (41%), Positives = 221/380 (58%), Gaps = 10/380 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I++ P KA+ +Y M A P+ YT P VLKA + G Q+H+
Sbjct: 124 FLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAH 183
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ GL + S I +Y+ G +AR++ D+ K G +A+ + G EA
Sbjct: 184 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDD----KGGEVDAVCMP-DRKGCFMEA 238
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++F ++K P + SV SAC +LG L+ +H Y ++ + D ++ SL+
Sbjct: 239 LEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA--KRNSIQLDGVLGTSLV 296
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCGR+DLA++VF ++ VSSW +MI G A +G A +A+D F M I PN +
Sbjct: 297 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEI 353
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFVGVL+AC HGG VQ+G F M+ Y +EP+ HYGC+VDLLGRAGLL EA +V
Sbjct: 354 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 413
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P + +WG L+GAC K GNV++GE V K L ELEP + G Y +LSNIYA G WEEV
Sbjct: 414 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 473
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
+R +MK R + P S+
Sbjct: 474 GEVRKLMKERGIKTTPGTSI 493
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 227/395 (57%), Gaps = 4/395 (1%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH I + H F WN IIR Y+ ++P A+ +Y M G+ P+ YT VL A
Sbjct: 19 YAHCIFSCTHHP--NLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNA 76
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
C+L L G++LHS V+ GL+ +G I LY+ G + A +FDE PE SW
Sbjct: 77 CCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASW 136
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+ +++G SQ+G+A E + + ++ D T+ SV CG LG L+L VH Y+
Sbjct: 137 STMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYI-- 194
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
K K D ++ +L+ MY KCG +D A KVF + + +V++W+ MI GYA +G +AL
Sbjct: 195 DKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKAL 254
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F M+ S I PN VTF VLSA H G V++G FE M Y+I P+ HYGCMVDL
Sbjct: 255 QLFDAMKRSKIIPNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDL 314
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
RAG++ A ++ MP++ NVV+W L+GAC+ G +GE +++ + +L+P S Y
Sbjct: 315 FCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENY 374
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V +SN+YAS G W V ++R++MK + K +S
Sbjct: 375 VFVSNVYASLGRWSSVCQVRSLMKEKAPKKQHGWS 409
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
S G A +F L WN II G S AI ++ + CG P+ T
Sbjct: 12 SPHGHVAYAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFG 71
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V +AC L L ++H + VK+ +T +LN LI +Y CG MD A +F E+
Sbjct: 72 FVLNACCKLLRLCEGQELHSQI--VKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMP 129
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+P+ +SW++M+ GY+ NG A E L M+ + + T V+ C G + GK
Sbjct: 130 EPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKW 189
Query: 347 FFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ K +I+ +V + + G L+ A + +GM + +V W ++
Sbjct: 190 VHSYIDKEGVKIDVVLG--TALVGMYSKCGSLDNALKVFQGMAER-DVTTWSIMIAG 243
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 227/424 (53%), Gaps = 8/424 (1%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
+D A + KC +L ++ I R WN++ + Y+
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD-----RTVVSWNSMFKAYSVFGEAF 238
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGF 162
A +Y M R PD T I L ASCQ L GR +HS A+ LG + + + F
Sbjct: 239 DAFGLYCLMLREEFKPDLSTF-INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS+YSK+ D AR +FD R SW +I+G ++ G EA+ +F + K G +PD
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT++S+ S CG G LE + + ++ + ++ N+LIDMY KCG + A +F
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARA-DIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ V +WT+MI GYA NG+ EAL F M + +PNH+TF+ VL AC H G ++
Sbjct: 417 DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+G +F +MK VY I P HY CMVDLLGR G LEEA ++ M K + IWG L+ A
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C+ NVK+ E A+ L LEP YV ++NIYA+ G+W+ RIR++MK RN+ K P
Sbjct: 537 CKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYP 596
Query: 463 AYSL 466
S+
Sbjct: 597 GESV 600
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 25/329 (7%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + + KA ++ M + PD T+ +++++ +L++ +H+
Sbjct: 118 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRA 203
+ +RLG++ + +IS Y K GD + A+ VF+ + +R + SWN++ S G A
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A ++ + + F+PD T +++ ++C + L +H + + + Q D +N
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ--DIEAIN 295
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+ I MY K A +F + SWT MI GYA G +EAL FH M +SG +P
Sbjct: 296 TFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKP 355
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----------MVDLLGR 373
+ VT + ++S C G ++ GK I+ R YGC ++D+ +
Sbjct: 356 DLVTLLSLISGCGKFGSLETGK----------WIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G + EAR + + P K VV W ++
Sbjct: 406 CGSIHEARDIFDNTPEK-TVVTWTTMIAG 433
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 165/375 (44%), Gaps = 37/375 (9%)
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
R + + S+ WN IR P ++L ++ M R G P+ +T P V KA +L
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+ +H+ ++ S+ F + + ++ K + A KVF+ PER +WNA+++
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G Q G +A +F ++ PD VT++++ + L+L +H ++
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMH--AVGIRLGV 184
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN--VSSWTSMIVGYAANGLANEALDCF 313
+ N+ I YGKCG +D A VF ID+ + V SW SM Y+ G A +A +
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGK----HFFEMM--KNVYQIEPRFAHYG-- 365
M +P+ TF+ + ++C + + +G+ H + +++ I + Y
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 366 ---CMVDLL-------------------GRAGLLEEARAMVEGM---PMKANVVIWGCLM 400
C LL G ++EA A+ M K ++V L+
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 401 GACEKFGNVKMGEWV 415
C KFG+++ G+W+
Sbjct: 365 SGCGKFGSLETGKWI 379
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R+++ + + +WN I E++ +F +K+ GFEP++ T V AC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
D+ VH ++ +KS SD + + +DM+ KC +D A KVF + + + ++W +
Sbjct: 66 ADVGCCEMVHAHL--IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV- 354
M+ G+ +G ++A F MR + I P+ VT + + + ++ E M V
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAMHAVG 179
Query: 355 --YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM-KANVVIWGCLMGACEKFG 407
++ + + G+ G L+ A+ + E + VV W + A FG
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/409 (37%), Positives = 222/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y R + +++ ++ M R VLP TL VL A +L L +G+++H
Sbjct: 188 WNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVK 247
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA-------------------------------RK 177
L +E E+ I +Y+ GD + A R
Sbjct: 248 DLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARN 307
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ PER SW A+I G Q R KE + +F ++ +PD+ TMVS+ +AC LG
Sbjct: 308 YFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGA 367
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL + Y+ K++ K D+ + N+LIDMY CG ++ A ++F + + SWT++I
Sbjct: 368 LELGEWIKAYI--DKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVI 425
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG EALD F M ++ I P+ VT +GVL AC H G V +GK FF M + I
Sbjct: 426 FGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGI 485
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP AHYGCMVDLLGRAG L+EA +++ MP+K N ++WG L+GAC + +M E A+
Sbjct: 486 EPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQ 545
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ ELEP + YV+L NIYA+ WE++ +R +M R + K P SL
Sbjct: 546 QILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSL 594
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 40/347 (11%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WNN+I+ Y+R+ P A+ +Y M GV+PD YT P +LK + A++ GR+LH
Sbjct: 85 FVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDH 144
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+LG SN F ++ I LYS +G+ AR VFD + + + +WN +I+G ++ + E+
Sbjct: 145 IVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDES 204
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +++ P +T+VSV SAC L DL + +VH+YV +K + ++ N+LI
Sbjct: 205 MKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVR--VLENALI 262
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY---AANGLA----------------- 306
DMY CG MD A +F + +V SWT+++ G+ GLA
Sbjct: 263 DMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTA 322
Query: 307 -----------NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-KNV 354
E L F M+ + I+P+ T V +L+AC H G ++ G+ + KN
Sbjct: 323 MIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNE 382
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV----VIWG 397
+I+ + ++D+ G +E+A + MP + + VI+G
Sbjct: 383 IKIDSFVGN--ALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFG 427
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 8/292 (2%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK--AGDFEKARKVFD 180
T P+ L +C+ A +Q+HS + GL SN + I+ K GD E AR VFD
Sbjct: 20 TPPLSLIKTCKSMAQL--KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFD 77
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
P WN +I G S+ G A+ M+ + + G PD+ T + ++
Sbjct: 78 TMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKC 137
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
++H ++ VK S+ + N+LI +Y G + +A VF + +V +W MI GY
Sbjct: 138 GRELHDHI--VKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGY 195
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+ +E++ F M + P+ +T V VLSAC + GK +K++ +IEP
Sbjct: 196 NRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDL-KIEPV 254
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
++D+ G ++ A + + M + +V+ W ++ G V +
Sbjct: 255 RVLENALIDMYAACGDMDTALGIFDNMKSR-DVISWTAIVTGFTNLGQVGLA 305
>gi|357455473|ref|XP_003598017.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487065|gb|AES68268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 479
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 220/382 (57%), Gaps = 8/382 (2%)
Query: 86 AFHWNNIIRLY-TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+F WN +IR + A+ + M A PD +T +LK +L + +G+QLH
Sbjct: 75 SFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTFSFILKIIARLRFVNLGKQLH 133
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ G E++ + + I +Y D E A ++F+E + L SWN+II G+
Sbjct: 134 CSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYN 193
Query: 205 EAIDMFIGL---KKCGFE--PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
EAID+F + + G E PD T+V SACG++G L+ +VH +V +
Sbjct: 194 EAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESI 253
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N+L+DMY KCG ++ AY+ F + + NV SW MI+G+A++G EAL F M
Sbjct: 254 SVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHE 313
Query: 320 GI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ RP+ +TF+ VL AC HGG V EG+ +FE+M Y I+P HYGCMVDLLGRAGL
Sbjct: 314 NVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFV 373
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA +++ MP++ N +IW L+ AC +GNV++GE V KHL ELEP YV+L+N+YA
Sbjct: 374 EAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYA 433
Query: 439 SRGLWEEVERIRAVMKHRNLAK 460
S G W E+ + R M+ R + K
Sbjct: 434 STGQWNEMSKERRSMQERRVRK 455
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+Q+H+ G N I + + + A VFD+ P+ WN +I G
Sbjct: 29 KQIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNS 88
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
F + PD+ T + L + L Q+H +F K ++ T
Sbjct: 89 TTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGKQLHCSLF--KFGFENHTY 146
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ NSLI MYG +++A+++F E+ QPN+ SW S+I + G NEA+D F M +
Sbjct: 147 VRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQ 206
Query: 321 -----IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN-VYQIEPRFAHYGCMVDLLGRA 374
++P+H T V LSAC G + G+ +++ V + + +VD+ +
Sbjct: 207 HNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVDMYAKC 266
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
G +EEA M K NVV W ++ GN
Sbjct: 267 GAVEEAYETFSNMKRK-NVVSWNVMILGFASHGN 299
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 284 bits (726), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 223/414 (53%), Gaps = 36/414 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL---PDCYTLPIVLKASCQLFALEIGRQL 143
F +N IR ++R P L + R GVL P+ +T + + A ++GRQ
Sbjct: 55 FLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQF 114
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE------------------- 184
H + ++ E + F + I YS G AR VFDE+ E
Sbjct: 115 HGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNI 174
Query: 185 ------------RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
R SWN +I+G +Q+G+ KEA+ +F ++ EP+ +VSV SAC
Sbjct: 175 LEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSAC 234
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LG L+ VH Y+ K + D+++ +LIDMY KCG +DLA + F + +VS+
Sbjct: 235 SQLGALDHGCWVHCYI--GKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSA 292
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+T+ I G A NG + EAL F M+ GI P+ V+++ VL AC H G V++G H+F M
Sbjct: 293 YTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMS 352
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+V+ I P HY CMVDLLGRAGLLEEA V MP+K + VIWG L+GAC +GN +MG
Sbjct: 353 DVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMG 412
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ V L E + DG Y++LSNIYA E+ E++R M+ R + ++P SL
Sbjct: 413 QRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKVDRVPGCSL 466
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 235/413 (56%), Gaps = 34/413 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLH 144
F +N+IIR YT + IY + R LPD +T P + K+ L + +G+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ G + E+ I +Y K D A KVFDE ER + SWN++++G ++ G+ K
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 205 -------------------------------EAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
EA+D F ++ G EPD+++++SV +C
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL +H Y + ++ T + N+LI+MY KCG + A ++F +++ +V SW
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQ--TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI GYA +G A+ A++ F+ M+ + ++PN +TF+G+LSAC H G QEG +F+MM+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
YQIEP+ HYGC++D+L RAG LE A + + MPMK + IWG L+ +C GN+ +
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL ELEP G YV+L+NIYA G WE+V R+R ++++ N+ K P SL
Sbjct: 431 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 151/348 (43%), Gaps = 37/348 (10%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++++ + GL + F + + K D + A ++F++ + +N+II + +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 201 GRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYV------FQVKS 253
+ I ++ L + FE PD T + +C SLG L QVH ++ F V +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 254 KQ-----------------------KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
+ + D + NSL+ Y + G+M A +F + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
SWT+MI GY G EA+D F M+ +GI P+ ++ + VL +C G ++ GK H +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + + ++++ + G++ +A + M K +V+ W ++ GN
Sbjct: 267 AERRGFLK---QTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGN 322
Query: 409 VKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKH 455
+Q + +G ++ L + + G+W+E R +M+
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 230/430 (53%), Gaps = 44/430 (10%)
Query: 78 HMLHSYSAAFHWNNIIRLYTRLEAPKKA-----LDIYIFMSRAGVLPDCYTLPIVLKASC 132
H H +F WN +IR + + A + I++ M GV PD +T P +L++
Sbjct: 16 HFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFA 75
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
L +GR +H+ +R GL + F ++ IS+YS G+ AR+VFDE P+ L SWN+
Sbjct: 76 SPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNS 135
Query: 193 IIA-------------------------------GLSQDGRAKEAIDMFIGLKKCGFE-- 219
II G + G+ KEA+ +F ++ G
Sbjct: 136 IINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDV 195
Query: 220 -PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P++ TM V +ACG LG LE H Y+ K D ++ +LIDMY KCG ++ A
Sbjct: 196 RPNEFTMSGVLAACGRLGALEHGKWAHAYI--DKCGMPVDVVLGTALIDMYAKCGSVEKA 253
Query: 279 YKVFWEIDQPN--VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
VF + PN V +W++MI G A +GLA E + F M G+RPN VTF+ V ACV
Sbjct: 254 TWVFSNLG-PNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACV 312
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
HGG V EGK + M Y I P HYGCMVDL GRAG ++EA +V+ MPM+ +V++W
Sbjct: 313 HGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVW 372
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+ G+++ E K L ELEP + GAYV+LSN+YA RG WE+V +R +M+
Sbjct: 373 GALLSGSRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETM 432
Query: 457 NLAKIPAYSL 466
+ K+P SL
Sbjct: 433 GIKKVPGCSL 442
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 233/412 (56%), Gaps = 37/412 (8%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F W II + ++AL+ Y M GV P+ +T +LK L +E G+ LH
Sbjct: 92 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALH 147
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS--------------- 189
S AV+LG +S+ + +G + +Y++ GD A+++FD PE+ L S
Sbjct: 148 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 207
Query: 190 ----------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
WN +I G +Q+G EA+ +F + K +P++VT++SV SACG
Sbjct: 208 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 267
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LE VH Y+ + + + + +L+DMY KCG ++ A VF +ID +V +W
Sbjct: 268 QLGALESGRWVHSYI--ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 325
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
SMIVGYA +G + EAL F M G+ P ++TF+G+LSAC H G V EG F MK+
Sbjct: 326 NSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 385
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGCMV+LLGRAG +E+A +V+ M ++ + V+WG L+GAC G + +GE
Sbjct: 386 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 445
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + L + + G Y++LSNIYA+ G W+ V R+R +MK + K P S
Sbjct: 446 KIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 497
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 27/284 (9%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+H++ R GL+ + Y+ G + + +F + W AII G + G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ----------- 250
++A++ + + G EP+ T S+ C L Q K F
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLD 167
Query: 251 --------VKSKQKSDTLMLNSLIDM------YGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
V ++Q DT+ SL+ + Y K G +D A +F +++ + W M
Sbjct: 168 VYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVM 227
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY NG+ NEAL F M ++ +PN VT + VLSAC G ++ G+ ++N
Sbjct: 228 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NG 286
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
I+ +VD+ + G LE+AR + + + K +VV W ++
Sbjct: 287 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK-DVVAWNSMI 329
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
LQ+H +F + ++ L Y GR+D + +F P+V WT++I G+A
Sbjct: 47 LQIHAVLF--RHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHA 104
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
GL +AL+ + M G+ PN TF +L C ++ GK + +
Sbjct: 105 LRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLY 160
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
G ++D+ R G + A+ + + MP K+ V
Sbjct: 161 VRTG-LLDVYARGGDVVSAQQLFDTMPEKSLV 191
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 223/377 (59%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + +KAL++ + M R GV P+ YT VL+A C + R LH +
Sbjct: 82 WTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA-CN--GMSDVRMLHCGII 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ + S I +++K G+ E A VFDE WN+II G +Q+ R+ A++
Sbjct: 139 KEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF + T+ SV AC L LEL +Q H ++ K D ++ N+L+DM
Sbjct: 199 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDM 254
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF ++ + +V +W++MI G A NG + EAL F M+ SG +PN++T
Sbjct: 255 YCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITI 314
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL AC H G +++G ++F MK +Y I P HYGCM+DLLG+AG L++A ++ M
Sbjct: 315 VGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEME 374
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+GAC N+ + E+ AK + L+P G Y VLSNIYA+ W+ VE
Sbjct: 375 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTVLSNIYANSQKWDSVEE 434
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ + K P S
Sbjct: 435 IRKRMRDIGIKKEPGCS 451
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 10/216 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN+II + + AL+++ M RAG + + TL VL+A L LE+G Q H
Sbjct: 177 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 236
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ + + + + +Y K G E AR+VF++ ER + +W+ +I+GL+Q+G ++E
Sbjct: 237 HIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISGLAQNGYSQE 294
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE---LALQVHKYVFQVKSKQKSDTLML 262
A+ +F +K G +P+ +T+V V AC G LE + K ++ + ++
Sbjct: 295 ALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGREH----Y 350
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ID+ GK G++D A K+ E++ +P+ +W +++
Sbjct: 351 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 386
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 123/251 (49%), Gaps = 9/251 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + I++Y K A ++FD+ P+R + SW +I+ S+ ++A+++ + + +
Sbjct: 49 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 108
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G P+ T SV AC + D+ + +H + +K +SD + ++LID++ K G +
Sbjct: 109 GVRPNVYTYSSVLRACNGMSDVRM---LHCGI--IKEGLESDVYVRSALIDVFAKLGEPE 163
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A VF E+ + W S+I G+A N ++ AL+ F M+ +G T VL AC
Sbjct: 164 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 223
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G + ++ + + +VD+ + G LE+AR + M + +V+ W
Sbjct: 224 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKER-DVITW 279
Query: 397 GCLMGACEKFG 407
++ + G
Sbjct: 280 STMISGLAQNG 290
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 242/440 (55%), Gaps = 7/440 (1%)
Query: 27 KTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
K+ F K V + LD + SKC L QL ++ H I+ S S
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGEL-QLAKMVFHGIQKTARSSVS-- 223
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I Y A+ Y + G PD T+ +L + Q AL G +H
Sbjct: 224 --WNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGH 281
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+LG +S+ + IS+YS+ GD A +FD R SW A+I+G S+ GR +A
Sbjct: 282 GFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDA 341
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +++ G +PD VT++S+ S CG G L L + Y + K D ++ N+LI
Sbjct: 342 LVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYA--SLHELKKDVVVCNALI 399
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG ++ A ++F+ + V SWT+MI A NG EALD F + ESGI PN++
Sbjct: 400 DMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNI 459
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+ VL AC HGG +++G+ F MM Y I P HY CM+DLLGR G L EA +++
Sbjct: 460 TFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQD 519
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MPMK + IWG L+GAC+ N+++GE+V+++L EL+P ++V ++NIYAS G W+EV
Sbjct: 520 MPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEV 579
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
+R M+ + K P S+
Sbjct: 580 AAMRKTMRSNQMRKSPGKSV 599
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 155/325 (47%), Gaps = 10/325 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ IR KAL ++ + G+ P+ +T P + KA +L L + +H+ V
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ + ++ + +Y K G + A +FD+ P R + SWNA+I G SQ G +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+G++ G PD T++ +T A S L VH +++ +DT + N+ I
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVH--AIGIETGLDADTSVSNTWIAA 197
Query: 269 YGKCGRMDLAYKVFWEIDQPNVS--SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y KCG + LA VF I + S SW S+I YA G +A+ + + G +P+
Sbjct: 198 YSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDAS 257
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQI--EPRFAHYGCMVDLLGRAGLLEEARAMV 384
T + +LS+C + G F + + +Q+ + + ++ + R G + A +
Sbjct: 258 TIISLLSSCQQPEALIYG---FLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILF 314
Query: 385 EGMPMKANVVIWGCLMGACEKFGNV 409
+GM ++ V W ++ + G V
Sbjct: 315 DGMSIR-TCVSWTAMISGYSEVGRV 338
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 223/375 (59%), Gaps = 3/375 (0%)
Query: 87 FHWNNIIRLYTRLEA-PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +I Y + ++ALD++ M V+P+ +T LKA L AL IG Q+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
AV+LG S + IS+Y+++G + ARK FD E+ L S+N +I +++ ++E
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F ++ G T S+ S S+G + Q+H V +KS K + + N+L
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARV--IKSGLKLNQSVCNAL 518
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY +CG ++ A++VF +++ NV SWTS+I G+A +G A +AL+ FH M E G+RPN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNL 578
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VT++ VLSAC H G V EG F+ M + + PR HY CMVD+LGR+G L EA +
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFIN 638
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP KA+ ++W +GAC GN+++G+ AK + E EP AY++LSN+YAS W+E
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDE 698
Query: 446 VERIRAVMKHRNLAK 460
V IR MK +NL K
Sbjct: 699 VSNIRKAMKEKNLIK 713
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 194/440 (44%), Gaps = 36/440 (8%)
Query: 9 SLSSLRMKSSHP-------LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKI--VATQLS 59
+L + + SHP L + +T +F + + D D + + + S
Sbjct: 53 TLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYS 112
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC + I+ ++ S W+ ++ + +AL ++ M G P
Sbjct: 113 KCGQWEKATSIF------QLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCES-GFISLYSKA-GDFEKARK 177
+ Y +A + +G + V+ G ++ C G I ++ K GD A K
Sbjct: 167 NEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFK 226
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VF++ PER +W +I L Q G A EAID+F+ + G+EPD T+ V SAC ++
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMEL 286
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC---GRMDLAYKVFWEIDQPNVSSWT 294
L L Q+H ++ D + LI+MY KC G M A K+F +I NV SWT
Sbjct: 287 LLLGQQLHSQA--IRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWT 344
Query: 295 SMIVGYAAN-GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+MI GY G EALD F M + + PNH TF L AC + ++ G+ F
Sbjct: 345 AMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVF----- 399
Query: 354 VYQIEPRFAHYGC----MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ ++ F+ C ++ + R+G +++AR + + + N++ + ++ A K N
Sbjct: 400 THAVKLGFSSVNCVANSLISMYARSGRIDDARKAFD-ILFEKNLISYNTVIDAYAKNLN- 457
Query: 410 KMGEWVAKHLQELEPWSDGA 429
E + E+E GA
Sbjct: 458 --SEEALELFNEIEDQGMGA 475
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 163/327 (49%), Gaps = 10/327 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W +I + +A+D+++ M +G PD +TL V+ A + L +G+QLHS
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 146 LAVRLGLESNEFCESGFISLYSKA---GDFEKARKVFDENPERKLGSWNAIIAGLSQD-G 201
A+R GL + I++Y+K G ARK+FD+ + + SW A+I G Q G
Sbjct: 296 QAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGG 355
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+D+F G+ P+ T S AC +L L + QV + VK S +
Sbjct: 356 YDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV--FTHAVKLGFSSVNCV 413
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
NSLI MY + GR+D A K F + + N+ S+ ++I YA N + EAL+ F+ + + G+
Sbjct: 414 ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ TF +LS G + +G+ ++K+ ++ + ++ + R G +E A
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISMYSRCGNIESA 531
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFG 407
+ E M + NV+ W ++ K G
Sbjct: 532 FQVFEDMEDR-NVISWTSIITGFAKHG 557
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KA+ M G PD T + LK + + +IG +H + L+ + + I
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 164 SLYSKAGDFEKARKVFD-ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
SLYSK G +EKA +F R L SW+A+++ + + A+ F+ + + G+ P++
Sbjct: 109 SLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL--AYK 280
+ T AC + + + + +V + Q SD + LIDM+ K GR DL A+K
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQ-SDVCVGCGLIDMFVK-GRGDLVSAFK 226
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
VF ++ + N +WT MI G A EA+D F M SG P+ T GV+SAC +
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACAN 283
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+GR +AI + G PD T C ++ VH+ + Q S + D
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ--SDLQLD 100
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMR 317
++ LNSLI +Y KCG+ + A +F + ++ SW++M+ +A N + AL F M
Sbjct: 101 SVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI 160
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRA-G 375
E+G PN F AC V G F + ++ GC ++D+ + G
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVC-VGCGLIDMFVKGRG 219
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
L A + E MP + N V W ++ +FG
Sbjct: 220 DLVSAFKVFEKMPER-NAVTWTLMITRLMQFG 250
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 248/441 (56%), Gaps = 37/441 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL-----------EAPKK-- 104
+S CT++ + I+A +I++ +YS F + ++ +Y +L E P +
Sbjct: 149 ISSCTSVSYCSAIHARVIKSL---NYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDL 205
Query: 105 ------------------ALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
L+ + M + +G P+ TL V+ A + AL+ G+ LH
Sbjct: 206 VSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHG 265
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ V+LG+ + I++Y K G + A ++F+E P R L SWN+++ + +G A++
Sbjct: 266 VVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEK 325
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+D+F +K+ G PD TMV++ AC G A +H Y+ + +D ++ +L
Sbjct: 326 GMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIH--RCGFNADIIIATAL 383
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+++Y K GR++ + +F EI + +WT+M+ GYA + EA+ F M + G+ +H
Sbjct: 384 LNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDH 443
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +LSAC H G V+EGK +FE+M VY++EPR HY CMVDLLGR+G LE+A +++
Sbjct: 444 VTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIK 503
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + +WG L+GAC +GNV++G+ VA+ L L+P Y++LSNIY++ GLW
Sbjct: 504 SMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRX 563
Query: 446 VERIRAVMKHRNLAKIPAYSL 466
++R +MK R L + P S
Sbjct: 564 ASKVRXLMKERRLTRNPGCSF 584
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 283 bits (725), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 260/518 (50%), Gaps = 72/518 (13%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLC-------KTHTFRKHVTIS----AASSFLDTHED 49
ML L P SL + H L + C + H F I +S L + D
Sbjct: 1 MLKLTPFHSLQQYLPHNLHLSLFQTCSAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSD 60
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P K +L I+ I R ++H WN II+ Y + + ++
Sbjct: 61 P---------KINDLGYARSIFDRIQRRSLIH-------WNTIIKCYVENQFSHDGIVLF 104
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
+ LPD +TLP V+K +L ++ G+Q+H LA+++G S+ F + +++YSK
Sbjct: 105 HELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKC 163
Query: 170 GDFEKARKVFD------------------------------------------ENPERKL 187
G+ + ARKVFD + P L
Sbjct: 164 GEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDL 223
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
+WN +IAG +G+ +A+ MF + K G P T+VSV SA L L +H Y
Sbjct: 224 VTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSY 283
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ K+ + D ++ SLI+MY KCG ++ A VF I + V WT++IVG +G+AN
Sbjct: 284 M--EKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMAN 341
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
AL F M ++G++PN + F+GVL+AC H G V +G+ +F+MM N Y+IEP HYGC+
Sbjct: 342 HALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCL 401
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VD+L RAG LEEA+ +E MP+ N VIW L+G G + +GE+ A+ + E+ P +
Sbjct: 402 VDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETI 461
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G Y++LSN+YA+ G+WE+V +R +M R K P S
Sbjct: 462 GCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCS 499
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y ++A+ + + G+ PD ++L VL A +L G +
Sbjct: 183 WTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYIS 242
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+ N F + + +Y K G+ E+A +F PE+ + SW+ +I G + +G ++A+D
Sbjct: 243 DSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALD 302
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD TMV V SAC +LG L+L + +++ S+ ++ +LIDM
Sbjct: 303 LFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS--LMDRNEFLSNPVLGTALIDM 360
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A+++F + + + W +M+VG + NG A F + + GIRP+ TF
Sbjct: 361 YSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L C HGG V EG+ FF MK V+ + P HYGCMVDLLGRAGLL EA ++ MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK N V+WG L+G C+ + + E V K L ELEPW+ G YV LSNIY+ WEE E+
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEK 540
Query: 449 IRAVMKHRNLAKIPAYS 465
IR+ MK + + KI A S
Sbjct: 541 IRSTMKEQQIQKIRACS 557
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 6/325 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR + A+ +Y M G LP+ +T+P VLKA + + +G ++HSL
Sbjct: 80 FLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSL 139
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G + + F ++ +SLY K +F+ A KVFD+ P++ + SW AII G G +EA
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I F L + G +PD ++V V +AC LGD + +Y+ S + + SL+
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI--SDSGMGRNVFVATSLL 257
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG ++ A +F + + ++ SW++MI GYA NGL +ALD F M+ ++P+
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VGVLSAC G + G +M +N + P ++D+ + G + +A +
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFT 375
Query: 386 GMPMKANVVIWGCLMGACEKFGNVK 410
M K VV W +M G+ K
Sbjct: 376 AMKRKDRVV-WNAMMVGLSMNGHAK 399
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+ +H+ +RL L+ + + + + G ++ VF + E + WN +I GL
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+AI ++ ++ GF P++ T+ V AC D+ L L++H + VK+ D
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLL--VKAGYDHDVF 150
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ SL+ +Y KC D A KVF +I NV SWT++I GY ++G EA+ F + E G
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++P+ + V VL+AC G G+ + + F ++D+ + G LE A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS-LLDMYVKCGNLERA 269
Query: 381 RAMVEGMPMKANVVIWGCLM 400
+ MP K ++V W ++
Sbjct: 270 NLIFSAMPEK-DIVSWSTMI 288
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y ++A+ + + G+ PD ++L VL A +L G +
Sbjct: 183 WTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYIS 242
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+ N F + + +Y K G+ E+A +F PE+ + SW+ +I G + +G ++A+D
Sbjct: 243 DSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALD 302
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD TMV V SAC +LG L+L + +++ S+ ++ +LIDM
Sbjct: 303 LFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASS--LMDRNEFLSNPVLGTALIDM 360
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A+++F + + + W +M+VG + NG A F + + GIRP+ TF
Sbjct: 361 YSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTF 420
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L C HGG V EG+ FF MK V+ + P HYGCMVDLLGRAGLL EA ++ MP
Sbjct: 421 IGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMP 480
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK N V+WG L+G C+ + + E V K L ELEPW+ G YV LSNIY+ WEE E+
Sbjct: 481 MKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEK 540
Query: 449 IRAVMKHRNLAKIPAYS 465
IR+ MK + + KI A S
Sbjct: 541 IRSTMKEQQIQKIRACS 557
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 6/325 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR + A+ +Y M G LP+ +T+P VLKA + + +G ++HSL
Sbjct: 80 FLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSL 139
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G + + F ++ +SLY K +F+ A KVFD+ P++ + SW AII G G +EA
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I F L + G +PD ++V V +AC LGD + +Y+ S + + SL+
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI--SDSGMGRNVFVATSLL 257
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG ++ A +F + + ++ SW++MI GYA NGL +ALD F M+ ++P+
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VGVLSAC G + G +M +N + P ++D+ + G + +A +
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLG--TALIDMYSKCGSVTQAWEIFT 375
Query: 386 GMPMKANVVIWGCLMGACEKFGNVK 410
M K + V+W +M G+ K
Sbjct: 376 AMK-KKDRVVWNAMMVGLSMNGHAK 399
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 127/260 (48%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+ +H+ +RL L+ + + + + G ++ VF + E + WN +I GL
Sbjct: 33 KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+AI ++ ++ GF P++ T+ V AC D+ L L++H + VK+ D
Sbjct: 93 DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLL--VKAGYDHDVF 150
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ SL+ +Y KC D A KVF +I NV SWT++I GY ++G EA+ F + E G
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++P+ + V VL+AC G G+ + + F ++D+ + G LE A
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS-LLDMYVKCGNLERA 269
Query: 381 RAMVEGMPMKANVVIWGCLM 400
+ MP K ++V W ++
Sbjct: 270 NLIFSAMPEK-DIVSWSTMI 288
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 228/412 (55%), Gaps = 33/412 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A+ +N I R Y R + + + +Y M V P+ +T P +++A C +A+E G+Q+H+
Sbjct: 85 AYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHA 144
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG---- 201
++ G ++ F + I +Y E+AR+VFD P+R + SW ++I G SQ G
Sbjct: 145 HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDK 204
Query: 202 ---------------------------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
R EA +F ++ D S+ SAC
Sbjct: 205 AREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTG 264
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG LE +H Y+ KS + D+ + ++IDMY KCG ++ A +VF E+ Q +SSW
Sbjct: 265 LGALEQGKWIHGYI--EKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWN 322
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
MI G A +G A++ F M + P+ +TFV VLSAC H G V+EGKH+F+ M V
Sbjct: 323 CMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEV 382
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
++P H+GCMVDLLGRAGLLEEAR ++ MP+ + + G L+GAC GN ++GE
Sbjct: 383 LGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQ 442
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ K + ELEP + G YV+L+N+YAS G WE+V ++R +M R + K P +S+
Sbjct: 443 IGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSM 494
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 158/360 (43%), Gaps = 44/360 (12%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVF 179
+ LP+ SC A E+ +Q HS +RLGL ++ I SK+GD A +VF
Sbjct: 20 HKLPLYGLDSCSTMA-EL-KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVF 77
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ P +N I G + A+ I M+ + P+ T + AC +E
Sbjct: 78 DKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIE 137
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H +V +K +D LN+LI MY ++ A +VF + Q +V SWTS+I G
Sbjct: 138 EGKQIHAHV--LKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITG 195
Query: 300 YAANGLANEALDCFHYMRESG-----------IRPN--HVTF------------------ 328
Y+ G ++A + F M E ++ N H F
Sbjct: 196 YSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255
Query: 329 VGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+LSAC G +++GK H + + K+ +++ + A ++D+ + G LE+A +
Sbjct: 256 ASMLSACTGLGALEQGKWIHGY-IEKSGIELDSKLA--TTVIDMYCKCGCLEKASEVFNE 312
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEE 445
+P K + W C++G G + + K ++ DG +V + + A GL EE
Sbjct: 313 LPQKG-ISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEE 371
>gi|449442178|ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
gi|449529652|ref|XP_004171812.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 606
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/451 (35%), Positives = 248/451 (54%), Gaps = 36/451 (7%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIR----------------THMLHS--YSA------ 85
P + L C L +L QI+ HI++ + ++H+ Y+A
Sbjct: 28 PEQNCLALLQACNALPKLTQIHTHILKLGLHNNPLVLTKFASISSLIHATDYAASFLFSA 87
Query: 86 --------AFHWNNIIRLYTRLEAPK-KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
AF +N +IR Y + K KAL +Y M +LP+ +T P VLKA L
Sbjct: 88 EADTRLYDAFLFNTLIRAYAQTGHSKDKALALYGIMLHDAILPNKFTYPFVLKACAGLEV 147
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIA 195
L +G+ +H V+ G + + ++ + +YS AG ARKVFDE P+ +W+A+I
Sbjct: 148 LNLGQTVHGSVVKFGFDCDIHVQNTMVHMYSCCAGGINSARKVFDEMPKSDSVTWSAMIG 207
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G ++ GR+ EA+ +F ++ PD++TMVS+ SAC LG LEL + Y+ + + +
Sbjct: 208 GYARVGRSTEAVALFREMQMAEVCPDEITMVSMLSACTDLGALELGKWIEAYIERHEIHK 267
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ + N+LIDM+ KCG + A K+F +++ + SWTS+IVG A +G EA F
Sbjct: 268 PVE--VSNALIDMFAKCGDISKALKLFRAMNEKTIVSWTSVIVGMAMHGRGQEATCLFEE 325
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M SG+ P+ V F+G+LSAC H G V+ G+ +F M Y++ P+ HYGCMVD+ R G
Sbjct: 326 MTSSGVAPDDVAFIGLLSACSHSGLVERGREYFGSMMKKYKLVPKIEHYGCMVDMYCRTG 385
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
L++EA V MP++ N VI L+ AC G K+GE + K L + EP + YV+LSN
Sbjct: 386 LVKEALEFVRNMPIEPNPVILRTLVSACRGHGEFKLGEKITKLLMKHEPLHESNYVLLSN 445
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
IYA WE+ +IR VM+ + + K+P ++
Sbjct: 446 IYAKTLSWEKKTKIREVMEVKGMKKVPGSTM 476
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 249/472 (52%), Gaps = 66/472 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSY----------------------------SAAFHW 89
L C N+++L +I+AHI++ + S AF +
Sbjct: 21 LKDCPNIVELKKIHAHIVKFSLSQSSFLVTKMVDVCNHYGETEYANLLFKGVADPNAFLY 80
Query: 90 NNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
N +IR Y + A+ +Y M + PD +T P V+K+ L ++G+Q+H
Sbjct: 81 NAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVH 140
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG---LSQDG 201
+ G +SN E+ + +Y K + A +VF+E ER SWN +I+G L Q
Sbjct: 141 GHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRLGQMR 200
Query: 202 RAK----------------------------EAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
RA+ +A++ F ++ G EPD++++VSV C
Sbjct: 201 RARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMVGIEPDEISLVSVLPDCA 260
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL +H ++ K+ + + N+LI+MY KCG +D ++F ++ + +V SW
Sbjct: 261 QLGALELGKWIH--IYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFDQMKERDVISW 318
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MIVG A +G A EA++ F M+++ I P+ +TFVG+L+AC H G + EG +FE MK
Sbjct: 319 STMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLRYFESMKR 378
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP HYGC+V+LLG +G L++A +V+ MP K + IWG L+ +C GN+K+
Sbjct: 379 DYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWGSLLSSCRSHGNLKIAV 438
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+HL ELEP G YV+LSN+YA G W+ V R+R +M+ +++ K P S
Sbjct: 439 IAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKLMRSKSMKKTPGCS 490
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V + C ++ +L+ ++H ++ + Q S ++ ++D+ G + A +F +
Sbjct: 18 VPILKDCPNIVELK---KIHAHIVKFSLSQSS--FLVTKMVDVCNHYGETEYANLLFKGV 72
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMR-----ESGIRPNHVTFVGVLSACVHGGK 340
PN + +MI Y N + A+ + M E+ I P+ TF V+ +C
Sbjct: 73 ADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFPDKFTFPFVVKSCA---- 128
Query: 341 VQEGKHFFEMMKNVYQIEPRFAHY------GCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
G +++ K V+ +F +V++ + L++A + E M + + V
Sbjct: 129 ---GLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTER-DAV 184
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
W L+ + G ++ + + +Q+ +S A V
Sbjct: 185 SWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIV 221
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 225/411 (54%), Gaps = 33/411 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++R Y+ P+ AL +Y M V + YT P +LKA L A E +Q+H+ +
Sbjct: 78 WNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHII 137
Query: 149 RLGLESNEFCESGFISLYS-------------------------------KAGDFEKARK 177
+ G + + + +Y+ K G+ + A K
Sbjct: 138 KRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYK 197
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F PE+ + SW +I G + G KEA+ + + G +PD +T+ SAC LG
Sbjct: 198 IFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGA 257
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE +H Y+ K++ K D ++ L DMY KCG M+ A VF ++++ V +WT++I
Sbjct: 258 LEQGKWIHTYI--EKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAII 315
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G EALD F M+++GI PN +TF +L+AC H G +EGK FE M +VY I
Sbjct: 316 GGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNI 375
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HYGCMVDL+GRAGLL+EAR +E MP+K N IWG L+ AC+ + ++G+ + K
Sbjct: 376 KPSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGK 435
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
L EL+P G Y+ L++IYA+ G W +V R+R+ +KHR L P S T
Sbjct: 436 ILIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSIT 486
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 37/299 (12%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAG--DFEKARKVFDENPERKLGSWNAIIAGLSQ 199
Q+H ++ G N+ S + Y++ + R VFD WN ++ S
Sbjct: 28 QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWNTMLRAYSN 87
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY------------ 247
+ A+ ++ + + T + AC +L E Q+H +
Sbjct: 88 SNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYA 147
Query: 248 ------VFQVKSKQKSDTLMLNSL-----------IDMYGKCGRMDLAYKVFWEIDQPNV 290
V+ + +S ++ N L ID Y K G +D+AYK+F + + NV
Sbjct: 148 TNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNV 207
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT+MIVG+ G+ EAL M +GI+P+ +T LSAC G +++GK
Sbjct: 208 ISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTY 267
Query: 351 M-KNVYQIEPRFAHYGC-MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ KN +I+P GC + D+ + G +E+A + + K V W ++G G
Sbjct: 268 IEKNEIKIDPVL---GCVLTDMYVKCGEMEKALLVFSKLEKKC-VCAWTAIIGGLAIHG 322
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ ++ C ++ +L +Q+H + +K + L +++L+ Y + ++LAY
Sbjct: 8 PNTEQTQALLERCSNMKEL---MQIHGQL--LKKGTIRNQLTVSTLLVSYARIELVNLAY 62
Query: 280 K--VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
VF I PN W +M+ Y+ + AL +H M + + N TF +L AC
Sbjct: 63 TRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSA 122
Query: 338 GGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+E + ++K + +E + ++ + +G ++ A + +P + ++V W
Sbjct: 123 LSAFEETQQIHAHIIKRGFGLEVYATN--SLLRVYAISGNIQSAHVLFNQLPTR-DIVSW 179
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQE 421
++ KFGN+ M + + + E
Sbjct: 180 NIMIDGYIKFGNLDMAYKIFQAMPE 204
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 221/378 (58%), Gaps = 1/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-FALEIGRQLHSLA 147
WN +I Y + ++A+ + M RA V P+ T+ VL A Q +L++G + S
Sbjct: 228 WNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWI 287
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
GL SN +G I +Y K GD E+A +F++ ++ + SWN +I G + KEA+
Sbjct: 288 EDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEAL 347
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + +P+DVT +S+ AC +LG L+L VH YV + K+ + SLID
Sbjct: 348 GLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLID 407
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + +A ++F ++ ++++W +MI G+A +G + AL F M G P+ +T
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDIT 467
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVL+AC H G + G+ +F M Y++ P+ HYGCM+DL GRAGL +EA +V+ M
Sbjct: 468 FVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNM 527
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
MK + IW L+GAC +++ E VAKHL ELEP + AYV+LSNIYA G WE+V
Sbjct: 528 EMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVA 587
Query: 448 RIRAVMKHRNLAKIPAYS 465
+IR + + K+P S
Sbjct: 588 KIRTRLNDNRMKKVPGCS 605
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 203/426 (47%), Gaps = 69/426 (16%)
Query: 47 HEDPAKIVATQLSKCTNLLQLNQIYAHIIRT--HMLH------------------SYSAA 86
H+ P+ T LS C L L QI++ II+T H H SY+ +
Sbjct: 27 HDHPS---LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALS 83
Query: 87 FH----------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
WN++IR + E+P AL+ Y+ M +G P+ YT P + K+ ++
Sbjct: 84 LFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRG 143
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD------------------------- 171
G+Q+H+ ++LGLE N F + I++Y++ G+
Sbjct: 144 AHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITG 203
Query: 172 ------FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
++AR++FDE P R + SWNA+I+G +Q GR +EA+ F +++ P+ TM
Sbjct: 204 YASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263
Query: 226 VSVTSACGSLG-DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+SV SAC G L+L V ++ S+ ++N LIDMY KCG ++ A +F +
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWI--EDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEK 321
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I NV SW MI GY EAL F M +S I PN VTF+ +L AC + G + G
Sbjct: 322 IQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLG 381
Query: 345 KHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
K + KN+ ++ A + ++D+ + G L A+ + + M K+ + W ++
Sbjct: 382 KWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKS-LATWNAMISGF 440
Query: 404 EKFGNV 409
G+
Sbjct: 441 AMHGHT 446
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 223/373 (59%), Gaps = 3/373 (0%)
Query: 89 WNNIIRLYTRL-EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W II Y + E K+A++++ M + P+ ++ VLKA L G Q++S A
Sbjct: 128 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 187
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+LG+ S + IS+Y+++G E ARK FD E+ L S+NAI+ G +++ +++EA
Sbjct: 188 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G T S+ S S+G + Q+H + +K KS+ + N+LI
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALIS 305
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG ++ A++VF E++ NV SWTSMI G+A +G A AL+ FH M E+G +PN +T
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+V VLSAC H G + EG+ F M + I PR HY CMVDLLGR+GLL EA + M
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 425
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ A+ ++W L+GAC GN ++G A+ + E EP AY++LSN++AS G W++V
Sbjct: 426 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 485
Query: 448 RIRAVMKHRNLAK 460
+IR MK RNL K
Sbjct: 486 KIRKSMKERNLIK 498
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 10/324 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +L + A+D+++ M +G +PD +T VL A +L L +G+QLHS +
Sbjct: 24 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 83
Query: 149 RLGLESNEFCESGFISLYSKA---GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA-K 204
RLGL + + +Y+K G + +RKVF++ PE + SW AII +Q G K
Sbjct: 84 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 143
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI++F + P+ + SV ACG+L D QV+ Y VK S + NS
Sbjct: 144 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA--VKLGIASVNCVGNS 201
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LI MY + GRM+ A K F + + N+ S+ +++ GYA N + EA F+ + ++GI +
Sbjct: 202 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 325 HVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
TF +LS G + +G+ ++K Y+ + ++ + R G +E A +
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALISMYSRCGNIEAAFQV 319
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
M + NV+ W ++ K G
Sbjct: 320 FNEMEDR-NVISWTSMITGFAKHG 342
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A KVFD+ PER L +W +I +Q G A++AID+F+ ++ G+ PD T SV SAC
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC---GRMDLAYKVFWEIDQPNVS 291
LG L L Q+H V ++ D + SL+DMY KC G +D + KVF ++ + NV
Sbjct: 69 LGLLALGKQLHSRV--IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126
Query: 292 SWTSMIVGYAANGLAN-EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT++I YA +G + EA++ F M IRPNH +F VL AC + G+ +
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS- 185
Query: 351 MKNVYQIEPRFAHYGC----MVDLLGRAGLLEEAR 381
Y ++ A C ++ + R+G +E+AR
Sbjct: 186 ----YAVKLGIASVNCVGNSLISMYARSGRMEDAR 216
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/437 (36%), Positives = 229/437 (52%), Gaps = 63/437 (14%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN IR ++ P A+ +Y M + V PD +T P VLKA +LF + G +H
Sbjct: 72 TFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHG 131
Query: 146 LAVRLGLESNEFCE-------------------------------SGFISLYSKAGDFEK 174
+RLG SN S I+ Y++ GD
Sbjct: 132 RVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRA------------------------------- 203
ARK+FDE P+R L SWN +I ++ G
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGYVLRNLN 251
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+EA+++F + G PD+VTM+S+ SAC LGDLE +VH + ++ +K K TL+ N
Sbjct: 252 REALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHAKIIEM-NKGKLSTLLGN 310
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+DMY KCG + A +VFW I +V SW S+I G A +G A E+L F M+ + + P
Sbjct: 311 ALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAEESLGLFREMKMTKVCP 370
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ VTFVGVL+AC H G V EG +F +MKN Y+IEP H GC+VD+LGRAGLL+EA
Sbjct: 371 DEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNF 430
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ M ++ N ++W L+GAC+ G+V++ + + L + G YV+LSN+YAS+G W
Sbjct: 431 IASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRMRGDQSGDYVLLSNVYASQGEW 490
Query: 444 EEVERIRAVMKHRNLAK 460
+ E +R +M + K
Sbjct: 491 DGAENVRKLMDDNGVTK 507
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 141 RQLHSLAVRLGLESN-----EFCESGFISLY---SKAGDFEKARKVFDENPERKLGSWNA 192
+Q+H+L + GL SN + + +S+ + + A ++F + P+ WN
Sbjct: 18 KQIHALMIVNGLTSNVGFLRKLVLTTAMSMVGPNATSAVIRYALQMFAQIPQPDTFMWNT 77
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
I G SQ A+ ++ + + +PD+ T V AC L + VH V ++
Sbjct: 78 YIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTKLFWVNTGSAVHGRVLRLG 137
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
S+ ++ N+L+ + KCG + +A +F + D+ +V +W+++I GYA G + A
Sbjct: 138 F--GSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKL 195
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM--MKNVYQIEPRFAHYGCMVDL 370
F M + + V++ +++ G+++ + F+ MK++ Y ++
Sbjct: 196 FDEMPKRDL----VSWNVMITVYTKHGEMESARRLFDEAPMKDIVSWNALIGGY--VLRN 249
Query: 371 LGRAGL-LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
L R L L + V P + ++ L+ AC G+++ GE V + E+
Sbjct: 250 LNREALELFDEMCGVGECPDEVTML---SLLSACADLGDLESGEKVHAKIIEMN 300
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 29/184 (15%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-- 335
A ++F +I QP+ W + I G + + A+ + M + ++P++ TF VL AC
Sbjct: 60 ALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVLKACTK 119
Query: 336 ---------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
VHG ++ G +++N + H C G L+ A + +
Sbjct: 120 LFWVNTGSAVHGRVLRLGFGSNVVVRNTLLV----FHAKC--------GDLKVATDIFDD 167
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD-GAYVVLSNIYASRGLWEE 445
K +VV W L+ + G++ VA+ L + P D ++ V+ +Y G E
Sbjct: 168 SD-KGDVVAWSALIAGYAQRGDLS----VARKLFDEMPKRDLVSWNVMITVYTKHGEMES 222
Query: 446 VERI 449
R+
Sbjct: 223 ARRL 226
>gi|449437638|ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 564
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 249/419 (59%), Gaps = 15/419 (3%)
Query: 51 AKIVA-TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
+KIVA LS N+ ++A I ++ F WN++I+ Y+++ K I+
Sbjct: 26 SKIVAFCALSPFGNINYARSVFAQIPHPNI-------FSWNSLIKGYSQIHTLSKE-PIF 77
Query: 110 IF--MSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
+F ++ G +P+ +TL VLKA + A G Q+HS ++ G S+ F ++ ++ Y
Sbjct: 78 LFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFY 137
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
K + ARKVF+E P R L +W A+I+G ++ G EA+++F ++K G +PD +T+V
Sbjct: 138 GKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLV 197
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV SAC G L++ +H Y+ K +D + +L+DMY KCG ++ A +VF +
Sbjct: 198 SVVSACAVAGALDIGYWLHAYI--EKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMP 255
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ ++W+SMI+G+A +GLA +A+D F M E+ + P+HVTF+ VLSAC HGG V G+
Sbjct: 256 VKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRR 315
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ +M + IEP HYGC VDLL R+GL+EEA + M + N W L+ C+K
Sbjct: 316 FWSLMLE-FGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPNAATWRSLLMGCKKK 374
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ +GE VA++L ELEP + Y+++SN+Y+S WE++ +R VMK + + +P S
Sbjct: 375 KLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCS 433
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 223/373 (59%), Gaps = 3/373 (0%)
Query: 89 WNNIIRLYTRL-EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W II Y + E K+A++++ M + P+ ++ VLKA L G Q++S A
Sbjct: 123 WTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 182
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+LG+ S + IS+Y+++G E ARK FD E+ L S+NAI+ G +++ +++EA
Sbjct: 183 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G T S+ S S+G + Q+H + +K KS+ + N+LI
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALIS 300
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG ++ A++VF E++ NV SWTSMI G+A +G A AL+ FH M E+G +PN +T
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+V VLSAC H G + EG+ F M + I PR HY CMVDLLGR+GLL EA + M
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 420
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ A+ ++W L+GAC GN ++G A+ + E EP AY++LSN++AS G W++V
Sbjct: 421 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 480
Query: 448 RIRAVMKHRNLAK 460
+IR MK RNL K
Sbjct: 481 KIRKSMKERNLIK 493
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 10/324 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +L + A+D+++ M +G +PD +T VL A +L L +G+QLHS +
Sbjct: 19 WTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 78
Query: 149 RLGLESNEFCESGFISLYSKA---GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA-K 204
RLGL + + +Y+K G + +RKVF++ PE + SW AII +Q G K
Sbjct: 79 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDK 138
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI++F + P+ + SV ACG+L D QV+ Y VK S + NS
Sbjct: 139 EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA--VKLGIASVNCVGNS 196
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LI MY + GRM+ A K F + + N+ S+ +++ GYA N + EA F+ + ++GI +
Sbjct: 197 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 325 HVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
TF +LS G + +G+ ++K Y+ + ++ + R G +E A +
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN--ALISMYSRCGNIEAAFQV 314
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
M + NV+ W ++ K G
Sbjct: 315 FNEMEDR-NVISWTSMITGFAKHG 337
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 15/215 (6%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A KVFD+ PER L +W +I +Q G A++AID+F+ ++ G+ PD T SV SAC
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC---GRMDLAYKVFWEIDQPNVS 291
LG L L Q+H V ++ D + SL+DMY KC G +D + KVF ++ + NV
Sbjct: 64 LGLLALGKQLHSRV--IRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121
Query: 292 SWTSMIVGYAANGLAN-EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT++I YA +G + EA++ F M IRPNH +F VL AC + G+ +
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS- 180
Query: 351 MKNVYQIEPRFAHYGC----MVDLLGRAGLLEEAR 381
Y ++ A C ++ + R+G +E+AR
Sbjct: 181 ----YAVKLGIASVNCVGNSLISMYARSGRMEDAR 211
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 229/377 (60%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ E +ALD++I M RAG +P+ YTL VL + ++ G+Q+HSL V
Sbjct: 79 WTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLV 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+K+ + ++AR+VFD PER + S AII+G +Q G +EA+D
Sbjct: 139 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L G + + VT ++ +A L L+ QVH + ++ + + NSLIDM
Sbjct: 199 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNSLIDM 256
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +VF + + +V SW +M++GY +GL +E + F + + ++P+ VT
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 315
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V EG F+ + HYGC++DLLGR+G LE+A ++E MP
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 375
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IWG L+GAC NV +GE VA+ L E+EP + G YV+LSNIYA+ G+W++V +
Sbjct: 376 FESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFK 435
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + + K P S
Sbjct: 436 VRKLMLEKTVTKEPGQS 452
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 153/297 (51%), Gaps = 11/297 (3%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A + AL GRQ+H+ + F + +++Y + G + AR V D PER +
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW +I+G SQ R EA+D+FI + + G P++ T+ +V ++C + QVH
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ VK+ +S + +SL+DMY K + A +VF + + +V S T++I GYA GL
Sbjct: 137 L--VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGC 366
EALD F + G++ NHVTF +++A + GK ++ + + P F A
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNS 252
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGC-LMGACEKFGNVKMGEWVAKHLQEL 422
++D+ + G L +R + + M ++ +VV W LMG +G +G V ++L
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMG----YGRHGLGHEVISLFKDL 304
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 233/413 (56%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +AL I++ M + GV PD TL V+ A + A++ G+Q+H+ V
Sbjct: 220 WNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVV 279
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGS------------------ 189
+ N+ + + +Y+K +AR +FD P R + S
Sbjct: 280 KCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVAR 339
Query: 190 -------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
WNA+IAG +Q+G +EA+ +F LK+ P T ++ +AC +L
Sbjct: 340 YMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLA 399
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DL+L Q H +V F+ + + SD + NSLIDMY KCG ++ +VF + + + S
Sbjct: 400 DLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVS 459
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVGYA NG N+AL+ F M ESG P+HVT +GVL AC H G + EG+++F M
Sbjct: 460 WNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMT 519
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ + P HY CMVDLLGRAG LEEA+ ++E M M+ + ++WG L+ AC+ N+++G
Sbjct: 520 AQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLG 579
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E+V K L E++P + G YV+LSN+YA W+ V R+R +M+ R + K P S
Sbjct: 580 EYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCS 632
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 143/289 (49%), Gaps = 32/289 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + +AL + M G L + Y+ L A L L++G Q+HSL
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R S+ + S + +YSK G E A+ VFDE R SWN++I Q+G EA+
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALK 238
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + KCG EPD+VT+ SV SAC ++ ++ Q+H V + + ++D ++ N+L+DM
Sbjct: 239 IFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKC-DEFRNDLILGNALLDM 297
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA--------------------------- 301
Y KC R++ A +F + +V S TSM+ GYA
Sbjct: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357
Query: 302 ----ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
NG EAL F ++ + P H TF +L+AC + +Q G+
Sbjct: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQ 406
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 128/242 (52%), Gaps = 2/242 (0%)
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
LE N F + I ++K+G + A +F++ P+ SWN++I+G Q GR EA+ F
Sbjct: 81 LERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFA 140
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ GF ++ + S SAC L DL+L Q+H V+ +S SD M ++L+DMY K
Sbjct: 141 QMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY--RSNYLSDVYMGSALVDMYSK 198
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CGR++ A VF E+ + SW S+I Y NG +EAL F M + G+ P+ VT V
Sbjct: 199 CGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASV 258
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+SAC ++EG+ + + ++D+ + + EAR + + MP+++
Sbjct: 259 VSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRS 318
Query: 392 NV 393
V
Sbjct: 319 VV 320
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W----------------- 283
+KS S+T + N LID+YGKCG +D+A K+F W
Sbjct: 46 IKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAV 105
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
++ Q + SW SMI G+ +G +EAL F M G N +F LSAC
Sbjct: 106 HIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQ 165
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
++ G ++ + + +VD+ + G +E A+++ + M +++ V W L
Sbjct: 166 DLKLGSQIHSLVYRSNYLSDVYMG-SALVDMYSKCGRVEYAQSVFDEMTVRSRVS-WNSL 223
Query: 400 MGACEKFGNV 409
+ E+ G V
Sbjct: 224 ITCYEQNGPV 233
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 238/410 (58%), Gaps = 34/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ ++ Y + E ++AL +++ M +GV D + L A ++ +E+GR +H LAV
Sbjct: 238 WSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAV 297
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
++G+E ++ I LYS G+ AR++FD+
Sbjct: 298 KVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAE 357
Query: 183 ------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
PE+ + SW+A+I+G +Q EA+ +F ++ G PD+ +VS SAC L
Sbjct: 358 MLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLA 417
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+L +H Y+ ++K + + ++ +LIDMY KCG ++ A +VF+ +++ VS+W ++
Sbjct: 418 TLDLGKWIHAYI--SRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAV 475
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I+G A NG ++L+ F M+++G PN +TF+GVL AC H G V +G+H+F M + ++
Sbjct: 476 ILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHK 535
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IE HYGCMVDLLGRAGLL+EA +++ MPM +V WG L+GAC K + +MGE +
Sbjct: 536 IEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLG 595
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L +L+P DG +V+LSNIYAS+G W V IR +M + K P S+
Sbjct: 596 RKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSM 645
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 158/349 (45%), Gaps = 76/349 (21%)
Query: 86 AFHWNNIIRLYTRLE-APKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
F WN I+R + L+ +P +AL Y + PD YT PI+L+ + GRQLH
Sbjct: 69 TFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLH 128
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ AV G + + + + ++LY+ G AR+VF+E+P L SWN ++AG Q G +
Sbjct: 129 AHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVE 188
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F G+ P+ T+ S NS
Sbjct: 189 EAERVFEGM------PERNTIAS-----------------------------------NS 207
Query: 265 LIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+I ++G+ G ++ A ++F + + ++ SW++M+ Y N + EAL F M+ SG+
Sbjct: 208 MIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVA 267
Query: 323 PNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKN----VYQ-----IEPR-- 360
+ V V LSAC VHG V+ G + +KN +Y ++ R
Sbjct: 268 VDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRI 327
Query: 361 FAHYGCMVDLLG---------RAGLLEEARAMVEGMPMKANVVIWGCLM 400
F G ++DL+ R G +++A + MP K +VV W ++
Sbjct: 328 FDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEK-DVVSWSAMI 375
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 16/282 (5%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGD---FEKARKVFDENPERKLGSWNAII-AG 196
+QL S + GL ++ + S I+ S + F + ++F+ +WN I+ A
Sbjct: 20 KQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAH 79
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
L +A+ + +PD T + C + Q+H + V S
Sbjct: 80 LYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHA--VSSGFD 137
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + N+L+++Y CG + A +VF E ++ SW +++ GY G EA F M
Sbjct: 138 GDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM 197
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
E N + +++ G V++ + F V E + MV + +
Sbjct: 198 PER----NTIASNSMIALFGRKGCVEKARRIF---NGVRGRERDMVSWSAMVSCYEQNEM 250
Query: 377 LEEARAM---VEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
EEA + ++G + + V+ + AC + NV+MG WV
Sbjct: 251 GEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWV 292
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 234/447 (52%), Gaps = 65/447 (14%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+Y ++ W +IR + + P+KAL+ Y M + GV + +T VLKA + + GR
Sbjct: 87 NYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGR 146
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAG------------------------------- 170
+H V++G + F + I +Y K G
Sbjct: 147 IVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCG 206
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLS-------------------------------Q 199
D E+AR++F E PER +GSWNA++ G S Q
Sbjct: 207 DTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQ 266
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+GRA EA+++F + G D + + S+ SAC +G L++ +H Y+ +SK ++D
Sbjct: 267 NGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYM--KRSKLRNDV 324
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +L+DMY KCG +D A+ VF + + N+ SW +M+ G A +G AL+ F M +
Sbjct: 325 FLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMEST 384
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ PN +TFV VLSAC H G V+EG F M + I P+ HYGCMVD+L R GL+ E
Sbjct: 385 GVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINE 444
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A+ M+ MP++ NVVIWG L+ AC+ G +GE V ++Q+L G YV+LSNI+A+
Sbjct: 445 AKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAA 504
Query: 440 RGLWEEVERIRAVMKHRNL-AKIPAYS 465
+ W EVE+ R +MK + KIP YS
Sbjct: 505 KSQWNEVEKTRKMMKQMGVEKKIPGYS 531
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 18/227 (7%)
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR-MDLAYKVFWE 284
+S +C S DL+ ++H + + + Q DT + ++ Y R +D A+ VF
Sbjct: 31 LSALQSCKSTEDLK---KIHAQL--IITGQIKDTFIATKTVESYAVSARNIDYAFWVFVG 85
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I+ P+ SWT+MI G+ +AL+ + MR+ G+ N TF+ VL A QEG
Sbjct: 86 INYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEG 145
Query: 345 KHFFEMMKNV---YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ + V Y + R A ++ + + G + +A + + MP NVV W ++
Sbjct: 146 RIVHGKLVKVGFCYDVFTRNA----LIHMYLKCGSITDAHLLFDEMP-NHNVVTWNTMIT 200
Query: 402 ACEKFGNVKMGEWVAKHLQE--LEPWSD--GAYVVLSNIYASRGLWE 444
C G+ + + + E + W+ G Y L ++ +R L++
Sbjct: 201 GCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFD 247
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 242/470 (51%), Gaps = 63/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------F 87
L C+N L I+AH++RTH+ AA F
Sbjct: 24 LECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNLF 83
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+N +IR + E P+ + YI R G+LPD T P ++KA QL +G Q H A
Sbjct: 84 IYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQA 143
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVF---------------------------- 179
++ G E + + ++ + +Y+ GD AR VF
Sbjct: 144 IKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSAR 203
Query: 180 ---DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
D PER L +W+ +I+G +++ ++A++ F L+ G ++ MV V S+C LG
Sbjct: 204 ELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLG 263
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L + + H+YV +++K + ++ +++DMY +CG ++ A VF ++ + +V WT++
Sbjct: 264 ALAMGEKAHEYV--MRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTAL 321
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G A +AL F M + G P +TF VL+AC H G V+ G FE MK +
Sbjct: 322 IAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLEIFESMKRDHG 381
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+EPR HYGCMVDLLGRAG L +A V MP+K N IW L+GAC NV++GE V
Sbjct: 382 VEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIHKNVEVGERVG 441
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
K L E++P G YV+LSNIYA W++V +R +MK + + K P YSL
Sbjct: 442 KILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSL 491
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 223/373 (59%), Gaps = 3/373 (0%)
Query: 89 WNNIIRLYTRL-EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W II Y + E K+A++++ M + P+ ++ VLKA L G Q++S A
Sbjct: 303 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 362
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+LG+ S + IS+Y+++G E ARK FD E+ L S+NAI+ G +++ +++EA
Sbjct: 363 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 422
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G T S+ S S+G + Q+H + +K KS+ + N+LI
Sbjct: 423 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALIS 480
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG ++ A++VF E++ NV SWTSMI G+A +G A AL+ FH M E+G +PN +T
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 540
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+V VLSAC H G + EG+ F M + I PR HY CMVDLLGR+GLL EA + M
Sbjct: 541 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 600
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ A+ ++W L+GAC GN ++G A+ + E EP AY++LSN++AS G W++V
Sbjct: 601 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 660
Query: 448 RIRAVMKHRNLAK 460
+IR MK RNL K
Sbjct: 661 KIRKSMKERNLIK 673
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 154/303 (50%), Gaps = 17/303 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ ++ + +A+ ++ M G P+ Y V++A +G ++ V
Sbjct: 96 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 155
Query: 149 RLG-LESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G LE++ I ++ K +GD A KVFD+ PER L +W +I +Q G A++A
Sbjct: 156 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 215
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F+ ++ G+ PD T SV SAC LG L L Q+H V ++ D + SL+
Sbjct: 216 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV--IRLGLALDVCVGCSLV 273
Query: 267 DMYGKC---GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN-EALDCFHYMRESGIR 322
DMY KC G +D + KVF ++ + NV SWT++I Y +G + EA++ F M IR
Sbjct: 274 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 333
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----MVDLLGRAGLLE 378
PNH +F VL AC + G+ + Y ++ A C ++ + R+G +E
Sbjct: 334 PNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVNCVGNSLISMYARSGRME 388
Query: 379 EAR 381
+AR
Sbjct: 389 DAR 391
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 21/321 (6%)
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
RL LD+ M++ PD T I+LK+ + ++G+ +H ++ GLE +
Sbjct: 6 RLHHAFSTLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSV 62
Query: 158 CESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ ISLYSK GD E AR +F+ +R L SW+A+++ + + +AI F+ + +
Sbjct: 63 VLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLEL 122
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK-CGRM 275
GF P++ +V AC + + ++ +V + ++D + LIDM+ K G +
Sbjct: 123 GFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELIDMFVKGSGDL 181
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
AYKVF ++ + N+ +WT MI +A G A +A+D F M SG P+ T+ VLSAC
Sbjct: 182 GSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 241
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGC-MVDLLGRA---GLLEEARAMVEGMPMK 390
G + GK ++ V ++ GC +VD+ + G ++++R + E MP +
Sbjct: 242 TELGLLALGK---QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-E 297
Query: 391 ANVVIWGCLM------GACEK 405
NV+ W ++ G C+K
Sbjct: 298 HNVMSWTAIITAYVQSGECDK 318
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 230/414 (55%), Gaps = 44/414 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + P+ AL++++ M R V+P+ T+ VL A + LE GR + S
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 254
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER----------------------- 185
R G++ + + + +Y+K G + A+K+FDE PER
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARL 314
Query: 186 --------KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLG 236
++ +WN +I+ Q+G+ KEA+ +F L+ +PD+VT+VS SAC LG
Sbjct: 315 VFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG 374
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLN-----SLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
++L +H Y+ K + ++LN SL+DMY KCG ++ A +VF+ +++ +V
Sbjct: 375 AIDLGGWIHVYI-------KREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVY 427
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
W++MI G +G A+D F M+E+ ++PN VTF VL AC H G V EG+ FF M
Sbjct: 428 VWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEM 487
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ VY + P HY CMVD+LGRAG LEEA ++ M + +WG L+GAC NV++
Sbjct: 488 EPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVEL 547
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GE + L +LEP + GA V+LSNIYA G WE+V +R +M+ L K P S
Sbjct: 548 GELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCS 601
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 200/447 (44%), Gaps = 66/447 (14%)
Query: 5 VPGISLSSLR------MKSSHPLLHRLCKTHTFRK----HVTISAASSFLDTHEDPAKIV 54
VP ISL + + +H +L + K + ++ H + F D
Sbjct: 6 VPSISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFT 65
Query: 55 ATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI-FMS 113
A+ LS + L ++ I + ++ + WN +IR Y P ++ I++ +
Sbjct: 66 ASALSSFSTLDYARNLFDQIPQPNL-------YTWNTLIRAYASSSDPFQSFVIFLDLLD 118
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ LP+ +T P V+KA+ +L A +G +H +A++L + + + + Y GD
Sbjct: 119 KCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLS 178
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A ++F + + SWN++I+ +Q ++A+++F+ +++ P+ VTMV V SAC
Sbjct: 179 MAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACA 238
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
DLE V Y+ + K D + N+++DMY KCG +D A K+F E+ + +V SW
Sbjct: 239 KKLDLEFGRWVCSYI--ERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSW 296
Query: 294 TSMIVGYA-------------------------------ANGLANEALDCFHYMRESGI- 321
T M+ GYA NG EAL F+ ++ S I
Sbjct: 297 TIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIA 356
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMK------NVYQIEPRFAHYGCMVDLLGRAG 375
+P+ VT V LSAC G + G +K N + I +VD+ + G
Sbjct: 357 KPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISS-------LVDMYAKCG 409
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGA 402
LE+A + + + +V +W ++
Sbjct: 410 SLEKALEVFYSVEER-DVYVWSAMIAG 435
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 223/373 (59%), Gaps = 3/373 (0%)
Query: 89 WNNIIRLYTRL-EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W II Y + E K+A++++ M + P+ ++ VLKA L G Q++S A
Sbjct: 321 WTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYA 380
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+LG+ S + IS+Y+++G E ARK FD E+ L S+NAI+ G +++ +++EA
Sbjct: 381 VKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 440
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G T S+ S S+G + Q+H + +K KS+ + N+LI
Sbjct: 441 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL--LKGGYKSNQCICNALIS 498
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG ++ A++VF E++ NV SWTSMI G+A +G A AL+ FH M E+G +PN +T
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 558
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+V VLSAC H G + EG+ F M + I PR HY CMVDLLGR+GLL EA + M
Sbjct: 559 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 618
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ A+ ++W L+GAC GN ++G A+ + E EP AY++LSN++AS G W++V
Sbjct: 619 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 678
Query: 448 RIRAVMKHRNLAK 460
+IR MK RNL K
Sbjct: 679 KIRKSMKERNLIK 691
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 154/303 (50%), Gaps = 17/303 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ ++ + +A+ ++ M G P+ Y V++A +G ++ V
Sbjct: 114 WSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVV 173
Query: 149 RLG-LESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G LE++ I ++ K +GD A KVFD+ PER L +W +I +Q G A++A
Sbjct: 174 KTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDA 233
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F+ ++ G+ PD T SV SAC LG L L Q+H V ++ D + SL+
Sbjct: 234 IDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRV--IRLGLALDVCVGCSLV 291
Query: 267 DMYGKC---GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN-EALDCFHYMRESGIR 322
DMY KC G +D + KVF ++ + NV SWT++I Y +G + EA++ F M IR
Sbjct: 292 DMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIR 351
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----MVDLLGRAGLLE 378
PNH +F VL AC + G+ + Y ++ A C ++ + R+G +E
Sbjct: 352 PNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVNCVGNSLISMYARSGRME 406
Query: 379 EAR 381
+AR
Sbjct: 407 DAR 409
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 168/331 (50%), Gaps = 23/331 (6%)
Query: 90 NNIIRLYT--RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N +IR RL LD+ M++ PD T I+LK+ + ++G+ +H
Sbjct: 14 NRLIRQLDVGRLHHAFSTLDL---MTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKL 70
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEA 206
++ GLE + + ISLYSK GD E AR +F+ +R L SW+A+++ + + +A
Sbjct: 71 MQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQA 130
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I F+ + + GF P++ +V AC + + ++ +V + ++D + LI
Sbjct: 131 IWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKT-GYLEADVCVGCELI 189
Query: 267 DMYGK-CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
DM+ K G + AYKVF ++ + N+ +WT MI +A G A +A+D F M SG P+
Sbjct: 190 DMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 249
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGC-MVDLLGRA---GLLEEA 380
T+ VLSAC G + GK ++ V ++ GC +VD+ + G ++++
Sbjct: 250 FTYSSVLSACTELGLLALGK---QLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDS 306
Query: 381 RAMVEGMPMKANVVIWGCLM------GACEK 405
R + E MP + NV+ W ++ G C+K
Sbjct: 307 RKVFEQMP-EHNVMSWTAIITAYVQSGECDK 336
>gi|297837569|ref|XP_002886666.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
gi|297332507|gb|EFH62925.1| hypothetical protein ARALYDRAFT_475343 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 243/449 (54%), Gaps = 45/449 (10%)
Query: 61 CTNLLQLNQIYAHIIRT----------------HMLHSYS---------------AAFHW 89
C+++ QL Q++A +RT + S+S ++F W
Sbjct: 39 CSDMSQLKQLHAFTLRTTYPDEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 98
Query: 90 NNIIRLYTR-LEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N +IR + ++A +Y M R PD +T P VLKA +F L G+Q+H
Sbjct: 99 NTLIRACAHDVSRKEEAFMLYRKMLERGESAPDKHTFPFVLKACAYIFGLSEGKQVHCQI 158
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ G + + +G I Y G + ARKVFDE PER L SWN++I L + G A+
Sbjct: 159 VKHGFSGDVYVNNGLIHFYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRVGEYDSAL 218
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-VKSKQKSDTLMLNSLI 266
+F ++K FEPD TM SV SAC LG L L H ++ + D L+ NSLI
Sbjct: 219 QLFRDMQK-SFEPDGYTMQSVLSACAGLGSLSLGTWSHVFLLRNCDVDVAMDVLIKNSLI 277
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPN 324
+MY KCG + +A +VF + + +++SW +MI+G+A +G A EA++CF M + G ++PN
Sbjct: 278 EMYCKCGSLRMAEQVFQGMRKHDLASWNAMILGFATHGKAEEAMNCFDCMVKEGKNVKPN 337
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTFV +L AC H G V +G+ +F+MM Y IEP HYGC++DLL RAG + EA MV
Sbjct: 338 SVTFVALLIACNHRGMVNKGRQYFDMMVREYGIEPALEHYGCIIDLLARAGYITEAIDMV 397
Query: 385 EGMPMKANVVIWGCLMGACEKFG-NVKMGEWVAKHL-------QELEPWSDGAYVVLSNI 436
MPMK + VIW L+ AC K G +V++ E +A+++ Q GAYV+LS +
Sbjct: 398 MSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTMEDNQSSNSNCSGAYVLLSRV 457
Query: 437 YASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YAS W +V +R +M + K P S
Sbjct: 458 YASANRWNDVGIVRKLMSDHGIRKEPGCS 486
>gi|125599128|gb|EAZ38704.1| hypothetical protein OsJ_23104 [Oryza sativa Japonica Group]
Length = 1280
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 227/400 (56%), Gaps = 9/400 (2%)
Query: 71 YAHIIRTHML-HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK 129
YA + + +L H F N ++R+ P+ AL+++ R LPD +T P +++
Sbjct: 756 YAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQ 812
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKL 187
A +L AL G LH+ A + G + F ++ + LY G FE A KVFDE P R L
Sbjct: 813 ACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNL 872
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN+++ + +GR E + +F + F PD T+VSV +AC G L L +VH Y
Sbjct: 873 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVY 932
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLA 306
V +V + S + N+LID+Y KCG ++ A ++F E+ V SWTS+IVG AANG
Sbjct: 933 VEKVGLVENSH--VSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFG 990
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
EAL+ F M + P +T VGVL AC H G V +G +F+ MK Y I PR H GC
Sbjct: 991 KEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGC 1050
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
MVDLLGRAG +EEA + MP++ N V+W L+G+C +++G+ + L EL+P
Sbjct: 1051 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGH 1110
Query: 427 DGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G YV+LSN+YA+ G+W +V +R M + K P +SL
Sbjct: 1111 SGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSL 1150
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 249/457 (54%), Gaps = 59/457 (12%)
Query: 66 QLNQIYAHIIRTHMLHSY------------------------SAAFHWNNIIRLYTRLEA 101
QL QI+A+ +R + H+ + + +N I+ ++ +
Sbjct: 3 QLKQIHAYSLRNGLDHTKFLIEKLLQLPDLPYACTLFDQIPKPSVYLYNKFIQTFSSIGH 62
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
P + +Y M G P+ Y+ + A LF + G+ LHS + G S+ F +
Sbjct: 63 PHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTA 122
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS----------------------- 198
+ +Y+K G AR++FDE P R + +WN++IAG +
Sbjct: 123 LLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISW 182
Query: 199 --------QDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
Q+G+ +A++MFIGL+ + G +P++V++ SV AC LG L++ ++ Y
Sbjct: 183 TALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYA- 241
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANE 308
+ + + N++++++ +CG ++ A +VF EI + N+ SW +MI+G A +G +
Sbjct: 242 -RNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCID 300
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
AL + M +RP+ VTFVG+L AC HGG V EG+ FE M++ +Q+ P+ HYGC+V
Sbjct: 301 ALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLV 360
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLLGRAG L+EA +++ MPM + VIWG L+GAC GNV++GE A+ L +LEPW+ G
Sbjct: 361 DLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPG 420
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YV+LSNIYA G W V R+R +MK ++ K YS
Sbjct: 421 NYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYS 457
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 232/412 (56%), Gaps = 37/412 (8%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F W II + ++AL+ Y M GV P+ +T +LK L +E G+ LH
Sbjct: 39 SVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILK----LCPIEPGKALH 94
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS--------------- 189
S AV+LG +S+ + +G + +Y++ GD A+++FD PE+ L S
Sbjct: 95 SQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELD 154
Query: 190 ----------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
WN +I G +Q+G EA+ +F + K +P++VT++SV SACG
Sbjct: 155 AARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACG 214
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LE VH Y+ + + + + +L+DMY KCG ++ A VF +ID +V +W
Sbjct: 215 QLGALESGRWVHSYI--ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAW 272
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
SMIVGYA G + EAL F M G+ P ++TF+G+LSAC H G V EG F MK+
Sbjct: 273 NSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 332
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGCMV+LLGRAG +E+A +V+ M ++ + V+WG L+GAC G + +GE
Sbjct: 333 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 392
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + L + + G Y++LSNIYA+ G W+ V R+R +MK + K P S
Sbjct: 393 KIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCS 444
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 27/260 (10%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+ G + + +F + W AII G + G ++A++ + + G EP+ T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 226 VSVTSACGSLGDLELALQVHKYVFQ-------------------VKSKQKSDTLMLNSLI 266
S+ C L Q K F V ++Q DT+ SL+
Sbjct: 79 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 138
Query: 267 DM------YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ Y K G +D A +F +++ + W MI GY NG+ NEAL F M ++
Sbjct: 139 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 198
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+PN VT + VLSAC G ++ G+ ++N I+ +VD+ + G LE+A
Sbjct: 199 AKPNEVTVLSVLSACGQLGALESGRWVHSYIEN-NGIQFNVHVGTALVDMYSKCGSLEDA 257
Query: 381 RAMVEGMPMKANVVIWGCLM 400
R + + + K +VV W ++
Sbjct: 258 RLVFDKIDDK-DVVAWNSMI 276
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 5/143 (3%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++ K+ + L+ L Y GR+D + +F P+V WT++I G+A GL +AL
Sbjct: 1 MEDKKPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQAL 60
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ + M G+ PN TF +L C ++ GK + + G ++D+
Sbjct: 61 NFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTG-LLDV 115
Query: 371 LGRAGLLEEARAMVEGMPMKANV 393
R G + A+ + + MP K+ V
Sbjct: 116 YARGGDVVSAQQLFDTMPEKSLV 138
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 229/377 (60%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ E +ALD++I M RAG +P+ YTL VL + ++ G+Q+HSL V
Sbjct: 111 WTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLV 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+K+ + ++AR+VFD PER + S AII+G +Q G +EA+D
Sbjct: 171 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L G + + VT ++ +A L L+ QVH + ++ + + NSLIDM
Sbjct: 231 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNSLIDM 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +VF + + +V SW +M++GY +GL +E + F + + ++P+ VT
Sbjct: 289 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 347
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V EG F+ + HYGC++DLLGR+G LE+A ++E MP
Sbjct: 348 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 407
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IWG L+GAC NV +GE VA+ L E+EP + G YV+LSNIYA+ G+W++V +
Sbjct: 408 FESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFK 467
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + + K P S
Sbjct: 468 VRKLMLEKTVTKEPGQS 484
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 150/289 (51%), Gaps = 11/289 (3%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
AL GRQ+H+ + F + +++Y + G + AR V D PER + SW +I+
Sbjct: 57 ALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMIS 116
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G SQ R EA+D+FI + + G P++ T+ +V ++C + QVH + VK+
Sbjct: 117 GYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLL--VKTNF 174
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+S + +SL+DMY K + A +VF + + +V S T++I GYA GL EALD F
Sbjct: 175 ESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQ 234
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRA 374
+ G++ NHVTF +++A + GK ++ + + P F A ++D+ +
Sbjct: 235 LYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNSLIDMYSKC 292
Query: 375 GLLEEARAMVEGMPMKANVVIWGC-LMGACEKFGNVKMGEWVAKHLQEL 422
G L +R + + M ++ +VV W LMG +G +G V ++L
Sbjct: 293 GKLLYSRRVFDNM-LERSVVSWNAMLMG----YGRHGLGHEVISLFKDL 336
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 232/444 (52%), Gaps = 69/444 (15%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I++ P KA+ +Y M A P+ YT P VLKA + G Q+H+
Sbjct: 103 FLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAH 162
Query: 147 AVRLGL--------------------------------ESNEFCESGFISLYSKAGDFEK 174
V+ GL E + C + I Y + G+ E
Sbjct: 163 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEA 222
Query: 175 ARKVFDENPERKL-GSWNAIIAGLS-------------------------------QDGR 202
AR++F+ P+R + +WNA+I+G S Q+G
Sbjct: 223 ARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGC 282
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA+++F ++K P + SV SAC +LG L+ +H Y ++ + D ++
Sbjct: 283 FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA--KRNSIQLDGVLG 340
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
SL+DMY KCGR+DLA++VF ++ VSSW +MI G A +G A +A+D F M I
Sbjct: 341 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIN 397
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN +TFVGVL+AC HGG VQ+G F M+ Y +EP+ HYGC+VDLLGRAGLL EA
Sbjct: 398 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 457
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+V +P + +WG L+GAC K GNV++GE V K L ELEP + G Y +LSNIYA G
Sbjct: 458 VVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 517
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
WEEV +R +MK R + P S+
Sbjct: 518 WEEVGEVRKLMKERGIKTTPGTSI 541
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 226/391 (57%), Gaps = 17/391 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +I Y ++ +KA+++Y M GV PD T+ I L +SC + L G++ +
Sbjct: 150 WNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTM-IGLVSSCAMLGDLNRGKEFYEYV 208
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS-------------WNAII 194
GL + + ++SK GD +AR++FD +R + S WNA+I
Sbjct: 209 KANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMI 268
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G Q R+++A+ +F ++ +PD++TM+ SAC LG L++ + +H+Y+ K
Sbjct: 269 GGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYI--EKHS 326
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ + SL+DMY KCG + A VF I N ++T++I G A +G A+ A+ F+
Sbjct: 327 LSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 386
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M ++GI P+ +TF+G+LSAC HGG +Q G+ +F MK+ + + P+ HY MVDLLGRA
Sbjct: 387 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 446
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
GLLEEA ++E MPM+A+ +WG L+ C GNVK+GE AK L EL+P G YV+L
Sbjct: 447 GLLEEADKLMESMPMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLD 506
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+Y +WE+ +R R +M R + KIP S
Sbjct: 507 GMYGEANMWEDAKRARRMMNERGVEKIPGCS 537
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 168/340 (49%), Gaps = 22/340 (6%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL---PDCYTLPIVLKASCQLFALEIGRQ 142
AF WN IR ++ E PK A+ Y M R G PD +T P++ K L +G
Sbjct: 43 AFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHM 102
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+ +L LE + I +++ G+ E ARKVFDE+P R L SWN +I G + G
Sbjct: 103 ILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGE 162
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
++AI+++ ++ G +PDDVTM+ + S+C LGDL + ++Y VK+ T+ L
Sbjct: 163 GEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEY---VKANGLRMTIPL 219
Query: 263 -NSLIDMYGKCG-------------RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
N+L+DM+ KCG + + K+F ++++ +V W +MI G + +
Sbjct: 220 ANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQD 279
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
AL F M+ S P+ +T + LSAC G + G ++ + + A +V
Sbjct: 280 ALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEK-HSLSLNVALGTSLV 338
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
D+ + G + EA + G+ + N + + ++G G+
Sbjct: 339 DMYAKCGNISEALCVFHGIQTR-NSLTYTAIIGGLALHGD 377
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGV 331
++ K+ I+ PN SW I G++ + +A+ + M G RP+H T+ +
Sbjct: 28 LNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVL 87
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH--YGCMVDLLGRAGLLEEARAMVEGMPM 389
C ++ H ++ +V+++ + + + G +E AR + + P+
Sbjct: 88 FKVCAD-LRLNSLGHM--ILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPV 144
Query: 390 KANVVIWGCLMGACEKFG 407
+ ++V W CL+ +K G
Sbjct: 145 R-DLVSWNCLINGYKKIG 161
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 229/377 (60%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ E +ALD++I M RAG +P+ YTL VL + ++ G+Q+HSL V
Sbjct: 79 WTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLV 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+K+ + ++AR+VFD PER + S AII+G +Q G +EA+D
Sbjct: 139 KTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALD 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L G + + VT ++ +A L L+ QVH + ++ + + NSLIDM
Sbjct: 199 LFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNSLIDM 256
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +VF + + +V SW +M++GY +GL +E + F + + ++P+ VT
Sbjct: 257 YSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTL 315
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V EG F+ + HYGC++DLLGR+G LE+A ++E MP
Sbjct: 316 LAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLIENMP 375
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IWG L+GAC NV +GE VA+ L E+EP + G YV+LSNIYA+ G+W++V +
Sbjct: 376 FESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWKDVFK 435
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + + K P S
Sbjct: 436 VRKLMLEKTVTKEPGQS 452
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 153/297 (51%), Gaps = 11/297 (3%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A + AL GRQ+H+ + F + +++Y + G + AR V D PER +
Sbjct: 17 ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSV 76
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW +I+G SQ R EA+D+FI + + G P++ T+ +V ++C + QVH
Sbjct: 77 VSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSL 136
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ VK+ +S + +SL+DMY K + A +VF + + +V S T++I GYA GL
Sbjct: 137 L--VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDE 194
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGC 366
EALD F + G++ NHVTF +++A + GK ++ + + P F A
Sbjct: 195 EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALI--LRKELPFFVALQNS 252
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGC-LMGACEKFGNVKMGEWVAKHLQEL 422
++D+ + G L +R + + M ++ +VV W LMG +G +G V ++L
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNM-LERSVVSWNAMLMG----YGRHGLGHEVISLFKDL 304
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 220/406 (54%), Gaps = 41/406 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR +++ E P K +++Y M A P+ +T ++ + L G Q+H V
Sbjct: 84 WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVV 143
Query: 149 RLGLESNEFCESGFISLYS----------------------------------KAGDFEK 174
G +N F + ++LY+ + GD +
Sbjct: 144 ANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDG 203
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR++FDE PER + SW +IAG +Q GR K+A+ +F +++ G + D V +V+ SAC
Sbjct: 204 ARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAE 263
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTL--MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LGDL+L +H Y+ + L + NSLI MY CG +D AYKVF + Q + S
Sbjct: 264 LGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS 323
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGVLSACVHGGKVQEGKHFFE 349
WTSMI G+A G A EAL F +M+ G RP+ +TF+GVL AC H G V +G+HFFE
Sbjct: 324 WTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFE 383
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
M + I PR HYGCMVDLL RAG L+EA ++E MPMK N +WG L+G C N
Sbjct: 384 CMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNA 443
Query: 410 KMGEWVAKHLQ-ELEPWSDGAY-VVLSNIYASRGLWEEVERIRAVM 453
++ VA+ L EL+P Y V+LSN+YA+ W++V +R M
Sbjct: 444 ELASHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKM 489
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 40/319 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLS 198
+Q+H+ + G F +S Y +G+ A KVF+ ENP + WN +I G S
Sbjct: 35 KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTV--WNQMIRGHS 92
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-------- 250
Q + ++++ + + EP++ T + C L QVH V
Sbjct: 93 QSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVF 152
Query: 251 ------------------VKSKQKSDTLM------LNSLIDMYGKCGRMDLAYKVFWEID 286
K+++ D ++ NSL+ Y +CG +D A ++F E+
Sbjct: 153 VRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMP 212
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ NV SWT+MI G A G +AL FH MR +G++ + V V LSAC G ++ G
Sbjct: 213 ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTW 272
Query: 347 FFEMMKNVYQI--EPRFAHY-GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
+ +P ++ + G++++A + GM ++ + W ++
Sbjct: 273 IHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS-WTSMITGF 331
Query: 404 EKFGNVKMGEWVAKHLQEL 422
K G+ + V + +Q L
Sbjct: 332 AKQGHAEEALGVFQWMQRL 350
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 39/217 (17%)
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
S+ C ++ L+ Q+H + QK+ +L L+ Y G + A+KVF I+
Sbjct: 23 SLLQTCDTIKKLK---QIHTQIIVNGFSQKN--FLLVKLLSFYITSGNLLNAHKVFERIE 77
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
P+ + W MI G++ + ++ ++ ++ M E+ PN T+ ++ C ++EG+
Sbjct: 78 NPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQ 137
Query: 347 FF---------------EMMKNVYQI------------------EPRFAHYGCMVDLLGR 373
+ N+Y I + + ++ R
Sbjct: 138 VHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVR 197
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G ++ AR + + MP + NVV W ++ C + G K
Sbjct: 198 CGDVDGARRIFDEMPER-NVVSWTTMIAGCAQIGRCK 233
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/408 (38%), Positives = 222/408 (54%), Gaps = 8/408 (1%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +L ++ I R WN++ + + A Y M R P
Sbjct: 796 KCGDLDSAKLVFEAIDRGDR-----TVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKP 850
Query: 120 DCYTLPIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D T I L ASCQ L GR +HS A+ LG + + + FIS+YSK+GD AR +
Sbjct: 851 DLSTF-INLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLL 909
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD P R SW +I+G ++ G EA+ +F + K G PD VT++S+ S CG G L
Sbjct: 910 FDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSL 969
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E+ + K K + ++ N+LIDMY KCG +D A +F + + +WT+MI
Sbjct: 970 EIGKWIDGRADMYGCK-KDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIA 1028
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA NG+ EA++ F M + +PNH+TF+ VL AC H G +++G +F +MK VY I
Sbjct: 1029 GYALNGIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 1088
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HY CMVDLLGR G L+EA ++ M K + IWG L+ AC+ NVK+ E A
Sbjct: 1089 PGLDHYSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADS 1148
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L LEP YV +SNIYA+ G+W+ RIR++MK N+ K P S+
Sbjct: 1149 LFNLEPQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESV 1196
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 157/329 (47%), Gaps = 25/329 (7%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + + K ++ M + PD T+ +++++ +L++ + +H+
Sbjct: 714 ATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHA 773
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRA 203
+RLG++ + +IS Y K GD + A+ VF+ + +R + SWN++ + G A
Sbjct: 774 FGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEA 833
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A + + + F+PD T +++ ++C + L +H + + + Q D +N
Sbjct: 834 FDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLIHSHAIHLGTDQ--DIEAIN 891
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+ I MY K G A +F + SWT MI GYA G +EAL FH M ++G+ P
Sbjct: 892 TFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNP 951
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----------MVDLLGR 373
+ VT + ++S C G ++ GK I+ R YGC ++D+ +
Sbjct: 952 DLVTLLSLISGCGKFGSLEIGK----------WIDGRADMYGCKKDNVMVCNALIDMYSK 1001
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G ++EAR + + K +V W ++
Sbjct: 1002 CGSIDEARDIFDNTSEKT-MVTWTTMIAG 1029
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 158/362 (43%), Gaps = 37/362 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +R P ++L ++ M R G P+ +T P V KA +L + +H+ +
Sbjct: 616 WNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLI 675
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ F + + ++ K + A KVF+ P R +WNA+++G Q G +
Sbjct: 676 KSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFS 735
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ PD VT++++ + L+L +H F ++ + N+ I
Sbjct: 736 LFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMH--AFGIRLGVDLQATVSNTWISA 793
Query: 269 YGKCGRMDLAYKVFWEIDQPN--VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
YGKCG +D A VF ID+ + V SW S+ +A G A +A + M +P+
Sbjct: 794 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLS 853
Query: 327 TFVGVLSACVHGGKVQEGK-------------------HFFEMMKN---------VYQIE 358
TF+ + ++C + + +G+ F M ++ I
Sbjct: 854 TFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIM 913
Query: 359 PRFA--HYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGE 413
P + M+ G ++EA A+ M + ++V L+ C KFG++++G+
Sbjct: 914 PSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGK 973
Query: 414 WV 415
W+
Sbjct: 974 WI 975
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 26/235 (11%)
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ +WN + E++ +F +K+ GFEP++ T V AC L + VH
Sbjct: 613 VNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHT 672
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
++ +KS SD + + +DM+ KC +D A KVF + + ++W +M+ G+ +G
Sbjct: 673 HL--IKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHT 730
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVY 355
++ F MR I P+ VT + ++ + +H ++ G + N +
Sbjct: 731 DKVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTW 790
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM-KANVVIWGCLMGACEKFGNV 409
+ G+ G L+ A+ + E + VV W + A FG
Sbjct: 791 ------------ISAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEA 833
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/474 (33%), Positives = 246/474 (51%), Gaps = 62/474 (13%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHS------------------------------Y 83
+ T L C NL Q+ Q++A I+ + S Y
Sbjct: 49 IVTTLDGCKNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNY 108
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
F +N +IR Y E K++ + Y M + GV+P +T + KA + +GRQ+
Sbjct: 109 PNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQI 168
Query: 144 HSLAVRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA------- 195
H + +G + + I +Y K G E RKVFDE P R + SW +I+
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228
Query: 196 ------------------------GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
G +Q+ + +EAI F +++ G E D++T++ V SA
Sbjct: 229 MESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISA 288
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C LG + A + + + K ++ ++LIDMY KCG + AY+VF + + NV
Sbjct: 289 CAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVY 348
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
S++SMI+G+A +G ++A+ F M ++ I+PN VTF+GVL+AC H G V++G FE+M
Sbjct: 349 SYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELM 408
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ Y I+P HY CMVDLLGRAG L+EA +V+ MP++ + +WG L+GAC + +
Sbjct: 409 EKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDI 468
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A HL ELEP+ G Y++L+NIYAS G W +V +R +M+ R L K PA+S
Sbjct: 469 AAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFS 522
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 223/408 (54%), Gaps = 8/408 (1%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +L ++ I R WN++ + Y+ A +Y M R P
Sbjct: 806 KCGDLDSAKLVFEAIDRGDR-----TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 860
Query: 120 DCYTLPIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D T I L ASCQ L GR +HS A+ LG + + + FIS+YSK+ D AR +
Sbjct: 861 DLSTF-INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 919
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD R SW +I+G ++ G EA+ +F + K G +PD VT++S+ S CG G L
Sbjct: 920 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSL 979
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E + + ++ + ++ N+LIDMY KCG + A +F + V +WT+MI
Sbjct: 980 ETGKWIDARA-DIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIA 1038
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA NG+ EAL F M + +PNH+TF+ VL AC H G +++G +F +MK VY I
Sbjct: 1039 GYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNIS 1098
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HY CMVDLLGR G LEEA ++ M K + IWG L+ AC+ NVK+ E A+
Sbjct: 1099 PGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAES 1158
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L LEP YV ++NIYA+ G+W+ RIR++MK RN+ K P S+
Sbjct: 1159 LFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESV 1206
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 25/329 (7%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + + KA ++ M + PD T+ +++++ +L++ +H+
Sbjct: 724 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 783
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRA 203
+ +RLG++ + +IS Y K GD + A+ VF+ + +R + SWN++ S G A
Sbjct: 784 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 843
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A ++ + + F+PD T +++ ++C + L +H + + + Q D +N
Sbjct: 844 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ--DIEAIN 901
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+ I MY K A +F + SWT MI GYA G +EAL FH M +SG +P
Sbjct: 902 TFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKP 961
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----------MVDLLGR 373
+ VT + ++S C G ++ GK I+ R YGC ++D+ +
Sbjct: 962 DLVTLLSLISGCGKFGSLETGK----------WIDARADIYGCKRDNVMICNALIDMYSK 1011
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G + EAR + + P K VV W ++
Sbjct: 1012 CGSIHEARDIFDNTPEKT-VVTWTTMIAG 1039
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 176/399 (44%), Gaps = 45/399 (11%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 111
+++ Q+ K +L I+ + R L S +A WN IR P ++L ++
Sbjct: 597 RVIGEQVRKSMSL-----IHRRLYRISGLSSVNA---WNLQIREAVNRNDPVESLLLFRE 648
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R G P+ +T P V KA +L + +H+ ++ S+ F + + ++ K
Sbjct: 649 MKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNS 708
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ A KVF+ PER +WNA+++G Q G +A +F ++ PD VT++++ +
Sbjct: 709 VDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQS 768
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN-- 289
L+L +H ++ + N+ I YGKCG +D A VF ID+ +
Sbjct: 769 ASFEKSLKLLEAMH--AVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRT 826
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK---- 345
V SW SM Y+ G A +A + M +P+ TF+ + ++C + + +G+
Sbjct: 827 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHS 886
Query: 346 HFFEM--MKNVYQIEPRFAHYG-----CMVDLL-------------------GRAGLLEE 379
H + +++ I + Y C LL G ++E
Sbjct: 887 HAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDE 946
Query: 380 ARAMVEGM---PMKANVVIWGCLMGACEKFGNVKMGEWV 415
A A+ M K ++V L+ C KFG+++ G+W+
Sbjct: 947 ALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 985
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 220/383 (57%), Gaps = 4/383 (1%)
Query: 86 AFHWNNIIRLYTRLEAPK-KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
AF ++ IIR Y K A+ Y M G+ P+ Y P VLKA L L +G+ +H
Sbjct: 73 AFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKACAGLRDLNLGKAVH 132
Query: 145 SLAVRLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
V+ G + + F ++ + +Y +G E ARK+FDE P+ +W A+I G ++ G++
Sbjct: 133 GSLVKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPVTWTAMIGGYARLGQS 192
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
A+ +F ++ G PDDVTMVSV SAC LG LEL + Y+ K + + N
Sbjct: 193 AGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYI--EKERVLKTVELSN 250
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+DM+ KCG +D A +F + + + SWTS+IVG A +G EA+ F M+ SG+ P
Sbjct: 251 ALVDMFAKCGDVDKALGLFRNMSKRTIVSWTSVIVGLAMHGRGLEAVSLFEEMKASGMVP 310
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ F+G+LSAC H G V+ G+ +F M + I P+ HYGCMVDLL RAGL+ EA
Sbjct: 311 EDIAFIGLLSACSHSGLVERGRQYFSEMTRQFGIVPKIEHYGCMVDLLSRAGLVTEALEF 370
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
VE MP++ N +IW L+ AC G +K+GE ++K L EP + YV+LSNIY W
Sbjct: 371 VERMPIEPNPIIWRTLISACRVHGELKLGESISKQLIRNEPMHESNYVLLSNIYGKMLDW 430
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
E+ +IR M + + K+P ++
Sbjct: 431 EKKSKIRVAMGKKGIQKVPGSTM 453
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 28/288 (9%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+L C TLP + QLH+ ++LG ++N + F S S A
Sbjct: 13 ILQACNTLPKLA-------------QLHTHIIKLGFQNNPLVLTKFTSASSNLDAIPYAM 59
Query: 177 K-VFDENPERKLGS--WNAIIAGLSQDGRAK-EAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
VF R + ++ II ++ ++K AI + + G P+ V AC
Sbjct: 60 SLVFSVEDARVYDAFLFSTIIRAYAESSQSKHNAIFYYNLMLGYGISPNKYAFPFVLKAC 119
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC-GRMDLAYKVFWEIDQPNVS 291
L DL L VH + VK D + N+++ MY C G M+ A K+F E+ + +
Sbjct: 120 AGLRDLNLGKAVHGSL--VKFGFDDDIFVQNTMVHMYCCCSGGMEFARKLFDEMPKLDPV 177
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK---HFF 348
+WT+MI GYA G + A+ F M+ +G+ P+ VT V VLSAC G ++ GK +
Sbjct: 178 TWTAMIGGYARLGQSAGAVGLFRKMQIAGVCPDDVTMVSVLSACTDLGALELGKWIESYI 237
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
E + + +E A +VD+ + G +++A + M K +V W
Sbjct: 238 EKERVLKTVELSNA----LVDMFAKCGDVDKALGLFRNMS-KRTIVSW 280
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 241/445 (54%), Gaps = 47/445 (10%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N I A + ML F W +I + + E ++AL++ I +
Sbjct: 488 NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELH 547
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
R+G +P + L A + +EIGR +HSLA++ G + N + +G IS+Y+K G+ E
Sbjct: 548 RSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVE 607
Query: 174 K-------------------------------ARKVFDENPERKLGSWNAIIAGLSQDGR 202
AR VF++ P+R + SW AII+ Q G
Sbjct: 608 DGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGH 667
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+ A+D+F+ + G +P+ +T+ S+ SACG+LG ++L Q H +F K DT +
Sbjct: 668 GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIF----KLGFDTFLF 723
Query: 263 --NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
NSLI MY KCG D + VF E+ + ++ +W +++VG A NGL EA+ F M G
Sbjct: 724 VGNSLITMYFKCGYED-GFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEG 782
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
I P+ ++F+GVL AC H G V EG F M Y I P HY CMVDLLGRAG L EA
Sbjct: 783 ILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEA 842
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
A++E MP+K + VIW L+GAC NV++G+ VA+ L ++ YV+LSN++AS+
Sbjct: 843 EALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQ 902
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G+W++V IR +MK + L K P S
Sbjct: 903 GMWDKVAEIRKLMKDQGLTKEPGIS 927
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 148/305 (48%), Gaps = 43/305 (14%)
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L N + I+ Y++ G ++A+ +F + P + SW A+IAG Q+ ++EA+++ I
Sbjct: 485 LNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLI 544
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
L + G P D + S SAC ++GD+E+ +H +K+ + ++ ++N LI MY K
Sbjct: 545 ELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHS--LAIKTGCQFNSYVMNGLISMYAK 602
Query: 272 CGR-------------------------------MDLAYKVFWEIDQPNVSSWTSMIVGY 300
CG +D A VF ++ + +V SWT++I Y
Sbjct: 603 CGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAY 662
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE-P 359
G ALD F M GI+PN +T +LSAC + G ++ G+ F + ++++
Sbjct: 663 VQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHAL---IFKLGFD 719
Query: 360 RFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
F G ++ + + G E+ + E MP + +++ W ++ C + G +G+ K
Sbjct: 720 TFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIKI 774
Query: 419 LQELE 423
+++E
Sbjct: 775 FEQME 779
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 51/355 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + +A D+++ M R PD +VL A L LE+ L +A+
Sbjct: 329 WMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAI 388
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E + S ++ Y++ G + A F+ PER SW +IA +Q GR +AI
Sbjct: 389 KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQ 448
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + E T ++ +A +G ++ A + + + + N++I
Sbjct: 449 LYERVP----EQTVATKTAMMTAYAQVGRIQKARLIFDEIL------NPNVVAWNAIIAG 498
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + G + A +F ++ N +SW +MI G+ N + EAL+ + SG P+ +F
Sbjct: 499 YTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSF 558
Query: 329 VGVLSAC-----------VHG------------------------GKVQEGKHFFEMMKN 353
LSAC +H G V++G H F ++
Sbjct: 559 TSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRV 618
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + ++ L +L++AR + E MP K +VV W ++ A + G+
Sbjct: 619 KDTVS-----WNSLISGLSENYMLDDARVVFEKMP-KRDVVSWTAIISAYVQAGH 667
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 150/345 (43%), Gaps = 51/345 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y++ +D + A V + T I+L + +E R++
Sbjct: 205 WNSMINGYSQ----NGKVDEARLLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT 260
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK---- 204
E N + IS Y + GD + ARK+FDE PE+ + SWN+++ G R
Sbjct: 261 ----ERNVVSWNAMISGYVQNGDLKNARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARE 316
Query: 205 ---------------------------EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
EA D+F+ + + PD V V SA L D
Sbjct: 317 LFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDD 376
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LEL + +K+ + D ++ +++++ Y + G +DLA F + + N SWT+MI
Sbjct: 377 LELIGSLRP--IAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMI 434
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+A G ++A+ + + E + T +++A G++Q+ + F+ + N
Sbjct: 435 AAFAQCGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIFDEILN---- 486
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
P + ++ + G+L+EA+ + + MP+K N W ++
Sbjct: 487 -PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVK-NSASWAAMIAG 529
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 163/397 (41%), Gaps = 36/397 (9%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
+LN R + L+S+ + H + +L TR L + F+ R P
Sbjct: 108 KLNNTRRRYSRVYSLYSHDSLKHLTSQSKLNTRHARWMDYLQQFKFVIRHKSGAKNKETP 167
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL------YSKAGDFEKARKVF 179
C E+GR R NE + +S YS+ G ++AR +F
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVF--NEMIQRDVVSWNSMINGYSQNGKVDEARLLF 225
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D + + +W ++ G +++GR +EA ++F + E + V+ ++ S GDL+
Sbjct: 226 DAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMT----ERNVVSWNAMISGYVQNGDLK 281
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
A ++ + + NS++ Y C RM A ++F ++ + N SW MI G
Sbjct: 282 NARKL------FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISG 335
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y EA D F M + RP+ FV VLSA G E++ ++ I
Sbjct: 336 YVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT-------GLDDLELIGSLRPIAI 388
Query: 360 RFAHYGCMV------DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN----V 409
+ + G +V + R G L+ A E MP + N W ++ A + G +
Sbjct: 389 KTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPER-NEYSWTTMIAAFAQCGRLDDAI 447
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
++ E V + + AY + I +R +++E+
Sbjct: 448 QLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEI 484
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 224/379 (59%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y+++ K+A+ +++ M G PD TL VL A L L +GR + +
Sbjct: 197 WNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVL 256
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+E N + S I +Y K GD AR+VFD P + + +WNAII G +Q+G + EAI
Sbjct: 257 EKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIV 316
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+++ G PD VTM+ V SAC ++G L+L V + + + D + ++LIDM
Sbjct: 317 LFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASE--KGLQHDVYVASALIDM 374
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESG-IRPNHV 326
Y KCG +D A +VF + N SW +MI A +G A EAL F M +++G ++PN +
Sbjct: 375 YAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDI 434
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V EG+ FE M + + P+ HY CMVDL RAGLL EA +++
Sbjct: 435 TFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKK 494
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP K + ++ G L+GAC++ N +GE V + E+E + G YV+ S IYA+ W++
Sbjct: 495 MPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDS 554
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M+ ++K P S
Sbjct: 555 AKMRVLMRQCGVSKTPGCS 573
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 195/346 (56%), Gaps = 9/346 (2%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIR-LYTRLEAPKKALDIYIFMSRAG 116
LSK +L L YA ++ + AF N ++R L T + +++Y + G
Sbjct: 68 LSKIIDLKDL--AYASLVFNQLTKPNIYAF--NVMLRGLATTWKKYDFCVELYYKLKSLG 123
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+ + +T P + A + L G+ H L + GL+ +E+ I++Y++ G+ AR
Sbjct: 124 LKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFAR 183
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
KVFDE +R L SWN++I+G S+ G KEAI +F+ +++ GFEPD++T+VSV ACG LG
Sbjct: 184 KVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLG 243
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
DL L V +V + K + ++ M ++LIDMYGKCG + A +VF + +V +W ++
Sbjct: 244 DLGLGRWVEGFVLE--KKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAI 301
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA NG +NEA+ F+ MRE+G P+ VT + VLSAC G + GK + E +
Sbjct: 302 ITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGK-WVETHASEKG 360
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++ ++D+ + G L++A + E MP K N V W ++ A
Sbjct: 361 LQHDVYVASALIDMYAKCGSLDDAVRVFESMPHK-NEVSWNAMISA 405
>gi|5080805|gb|AAD39314.1|AC007258_3 Hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 170/458 (37%), Positives = 250/458 (54%), Gaps = 45/458 (9%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRT----------------HMLHSYS----------- 84
++ AT L C+++ QL Q++A +RT + S+S
Sbjct: 26 RVHATVLQTCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 85
Query: 85 ----AAFHWNNIIRLYTR-LEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALE 138
++F WN +IR + ++A +Y M R PD +T P VLKA +F
Sbjct: 86 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 145
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G+Q+H V+ G + + +G I LY G + ARKVFDE PER L SWN++I L
Sbjct: 146 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 205
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF-QVKSKQKS 257
+ G A+ +F +++ FEPD TM SV SAC LG L L H ++ +
Sbjct: 206 RFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAM 264
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM- 316
D L+ NSLI+MY KCG + +A +VF + + +++SW +MI+G+A +G A EA++ F M
Sbjct: 265 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 324
Query: 317 -RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
+ +RPN VTFVG+L AC H G V +G+ +F+MM Y IEP HYGC+VDL+ RAG
Sbjct: 325 DKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG 384
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMGEWVAKHL---QELEPWSD---- 427
+ EA MV MPMK + VIW L+ AC K G +V++ E +A+++ +E S+
Sbjct: 385 YITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCS 444
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GAYV+LS +YAS W +V +R +M + K P S
Sbjct: 445 GAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCS 482
>gi|449477579|ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Cucumis sativus]
Length = 602
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 245/437 (56%), Gaps = 34/437 (7%)
Query: 58 LSKCTNLLQLNQIYAHIIRTH-----------MLHSYSAAF------------------- 87
+ CT+ QL QI+AHII T + + SA F
Sbjct: 34 IKSCTHKSQLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVS 93
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
H+N ++R Y+ +P + L +Y M R GV D + +K+ +L +L G Q+H+
Sbjct: 94 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARI 153
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G +++ + + LYS G E+A K+FDE P++ + +WN +I+ L+++ R ++A+
Sbjct: 154 FINGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDAL 213
Query: 208 DMFIGLKKCGF--EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+F ++ + +PD VT + + AC L LE ++H Y+ Q +S+ + NSL
Sbjct: 214 GLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESN--LCNSL 271
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY +CGRMD AY+VF ++ + NV SW++MI G + NG EA++ F M+++G+ P
Sbjct: 272 ISMYSRCGRMDKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGD 331
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TF VLSAC H G V EG FF+ M+ + I P HYGC+VDLLGRAG+L++A ++
Sbjct: 332 HTFTAVLSACSHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIM 391
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M ++ + +W L+GAC G+ +GE + +HL EL+ G YV+L NIY+S G W++
Sbjct: 392 SMEVRPDATMWRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDK 451
Query: 446 VERIRAVMKHRNLAKIP 462
V +R +MK + + P
Sbjct: 452 VTELRKLMKEKGIYTTP 468
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 255/477 (53%), Gaps = 63/477 (13%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHML----------------------HSY----- 83
++ V + L +C + + QI +H+ + L H+Y
Sbjct: 13 SRRVLSLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLS 72
Query: 84 ---SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
+F WN ++R +T + P L +Y +M G LP+ YT +L+A QL L G
Sbjct: 73 LPRRTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFG 132
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYS-------------------------------KA 169
LH+ AVRLG E+ +F ++G + LY+ K+
Sbjct: 133 ILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKS 192
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G AR++FDE PE+ SW+A+I G +Q G +EA+++F ++ GF P+ +V
Sbjct: 193 GQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGAL 252
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
+AC LG L+ +H YV +++ D ++ +LIDMY KCG ++ A +VF E+ +
Sbjct: 253 TACAFLGALDQGRWIHAYV--DRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRD 310
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V ++TS+I G A +G + A++ F M+ G+ PN VTF+ +LSAC G V+EG F+
Sbjct: 311 VFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFK 370
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
M N+Y IEP HYGC+VDLLGRAG+LE+A+ +V MP++ + + G L+ AC G+V
Sbjct: 371 SMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDV 430
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
++G+ + L E G +V+LSN+YAS WE+V ++R M+ + + K+P SL
Sbjct: 431 ELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSL 487
>gi|147833682|emb|CAN62088.1| hypothetical protein VITISV_030648 [Vitis vinifera]
Length = 583
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 248/444 (55%), Gaps = 37/444 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRT-------------HMLHSYS-----------------AAF 87
L+ CT + QL Q++A IRT +LH S +F
Sbjct: 33 LNSCTCMSQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSF 92
Query: 88 HWNNIIRLYTRLEAPKK-ALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN +IR R K+ A+ +Y M G V+ D +T P VLKA LFAL G Q+H+
Sbjct: 93 MWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHA 152
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++LG +SB + + + Y+ + A+ VFD ER L SWN +I + G
Sbjct: 153 QILKLGFDSBVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDA 212
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-S 264
A+++F ++K FEPD T+ S+ +AC +G L L + H ++ + + + ++LN S
Sbjct: 213 ALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKXDADRVNDVLLNTS 271
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRP 323
L+DMY KCG ++LA ++F + + +V+SW SMI+G++ +G AL+ F M R + P
Sbjct: 272 LVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMP 331
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N +TFVGVLSAC HGG V EG+ +F++M Y+I+P HYGC+VDLL RAGL++EA +
Sbjct: 332 NAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDV 391
Query: 384 VEGMPMKANVVIWGCLMGA-CEKFGNVKMGEWVAKHLQELEPW-SDGAYVVLSNIYASRG 441
V MPM+ ++VIW L+ A C++ V++ E +A + E E G YV+LS +YAS
Sbjct: 392 VSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMASRVLEAEGGVCSGVYVLLSRVYASAS 451
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W +V +R +M + + K P S
Sbjct: 452 RWNDVGMVRKLMTDKGVVKEPGCS 475
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 221/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + E L I+ M G P+ YT +L++ L +++G+Q+H+ V
Sbjct: 500 WNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV 559
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ L+ N+F + + +Y+K E A +F+ +R L +W I+AG +QDG+ ++A+
Sbjct: 560 KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 619
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
FI +++ G +P++ T+ S S C + L+ Q+H +K+ Q D + ++L+DM
Sbjct: 620 CFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA--IKAGQSGDMFVASALVDM 677
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A VF + + SW ++I GY+ +G +AL F M + G P+ VTF
Sbjct: 678 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTF 737
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G ++EGK F + +Y I P HY CMVD+LGRAG E + +E M
Sbjct: 738 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 797
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +NV+IW ++GAC+ GN++ GE A L ELEP D Y++LSN++A++G+W++V
Sbjct: 798 LTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTN 857
Query: 449 IRAVMKHRNLAKIPAYS 465
+RA+M R + K P S
Sbjct: 858 VRALMSTRGVKKEPGCS 874
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 178/408 (43%), Gaps = 44/408 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + A++++ M R GV + +T LKA LE G+Q+H+ A+
Sbjct: 197 WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAI 256
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G S+ F S + LY+K G+ A +VF P++ SWNA++ G +Q G A++ ++
Sbjct: 257 KVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLN 316
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + T+ +V C + G+L VH ++ + D + L+DM
Sbjct: 317 LFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL--DEFISCCLVDM 374
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG A KVF I+ P+V SW+++I G + EA + F MR SG+ PN T
Sbjct: 375 YSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTL 434
Query: 329 VGVLSA-----------------CVHG------------------GKVQEGKHFFEMMKN 353
++SA C +G G VQ+G FE N
Sbjct: 435 ASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTN 494
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
I G + GL + + EG N+ + ++ +C +V +G+
Sbjct: 495 RDLISWNALLSGFHDNETCDTGLRIFNQMLAEG--FNPNMYTFISILRSCSSLSDVDLGK 552
Query: 414 WVAKHLQELEPWSDGAYVV---LSNIYASRGLWEEVERIRAVMKHRNL 458
V H Q ++ DG V L ++YA E+ E I + R+L
Sbjct: 553 QV--HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 598
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 6/312 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + ++ +K L+++ M+ + + +TL VLK L G+ +HS
Sbjct: 295 AVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHS 354
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LA+R+G E +EF + +YSK G A KVF + + SW+AII L Q G+++E
Sbjct: 355 LAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSRE 414
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A ++F ++ G P+ T+ S+ SA LGDL +H V K + D + N+L
Sbjct: 415 AAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACV--CKYGFEYDNTVCNAL 472
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY K G + +VF ++ SW +++ G+ N + L F+ M G PN
Sbjct: 473 VTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNM 532
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+ +L +C V GK +++KN ++ +VD+ + LE+A +
Sbjct: 533 YTFISILRSCSSLSDVDLGKQVHAQIVKN--SLDGNDFVGTALVDMYAKNRFLEDAETIF 590
Query: 385 EGMPMKANVVIW 396
+ +K ++ W
Sbjct: 591 NRL-IKRDLFAW 601
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 4/284 (1%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L G+ +H ++ G+ + + +++Y+K G A KVF E PER + SW A+I G
Sbjct: 144 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 203
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+G A+++F +++ G E ++ T + AC DLE QVH +K
Sbjct: 204 FVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEA--IKVGDF 261
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
SD + ++L+D+Y KCG M LA +VF + + N SW +++ G+A G A + L+ F M
Sbjct: 262 SDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRM 321
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
S I + T VL C + G ++ G+ + + F C+VD+ + GL
Sbjct: 322 TGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISC-CLVDMYSKCGL 380
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+A + + +VV W ++ ++ G + V K ++
Sbjct: 381 AGDALKVFVRIE-DPDVVSWSAIITCLDQKGQSREAAEVFKRMR 423
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 39/294 (13%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W I+ Y + +KA+ +I M R GV P+ +TL L ++ L+ GRQLHS+
Sbjct: 599 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 658
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A++ G + F S + +Y+K G E A VFD R SWN II G SQ G+ +A
Sbjct: 659 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 718
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ F + G PD+VT + V SAC +G +E + NSL
Sbjct: 719 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK-----------------HFNSLS 761
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+YG P + + M+ G +E ++ E + N +
Sbjct: 762 KIYGI---------------TPTIEHYACMVDILGRAGKFHEVES---FIEEMKLTSNVL 803
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEE 379
+ VL AC G ++ G+ MK ++++EP ++Y + ++ G+ ++
Sbjct: 804 IWETVLGACKMHGNIEFGER--AAMK-LFELEPEIDSNYILLSNMFAAKGMWDD 854
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C S GDL +H V +KS D+ + NSL+++Y KCG + A KVF EI + +V
Sbjct: 137 TCASKGDLNEGKAIHGQV--IKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDV 194
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT++I G+ A G + A++ F MR G+ N T+ L AC ++ GK
Sbjct: 195 VSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAE 254
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
V F +VDL + G + A + MP K N V W L+ + G+ +
Sbjct: 255 AIKVGDFSDLFVGSA-LVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALLNGFAQMGDAE 312
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 237/414 (57%), Gaps = 35/414 (8%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ + +N I+ ++ + P + +Y M G P+ Y+ + A LF + G+ LH
Sbjct: 46 SVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQMLH 105
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS------ 198
S + G S+ F + + +Y+K G AR++FDE P R + +WN++IAG +
Sbjct: 106 SHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHME 165
Query: 199 -------------------------QDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSAC 232
Q+G+ +A++MFIGL+ + G +P++V++ SV AC
Sbjct: 166 AALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVSIASVLPAC 225
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI-DQPNVS 291
LG L++ ++ Y + + + N++++++ +CG ++ A +VF EI + N+
Sbjct: 226 SQLGALDIGKRIEAYA--RNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEIGSKRNLC 283
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW +MI+G A +G +AL + M +RP+ VTFVG+L AC HGG V EG+ FE M
Sbjct: 284 SWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESM 343
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
++ +Q+ P+ HYGC+VDLLGRAG L+EA +++ MPM + VIWG L+GAC GNV++
Sbjct: 344 ESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVEL 403
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GE A+ L +LEPW+ G YV+LSNIYA G W V R+R +MK ++ K YS
Sbjct: 404 GEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAGYS 457
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 4/137 (2%)
Query: 276 DLAY--KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
DL Y +F +I +P+V + I +++ G + + M G PN +F +
Sbjct: 31 DLPYACTLFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFP 90
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
AC V G+ FA ++D+ + G+L AR + + MP++ ++
Sbjct: 91 ACASLFNVYPGQMLHSHFCKSGFASDMFA-MTALLDMYAKLGMLRSARQLFDEMPVR-DI 148
Query: 394 VIWGCLMGACEKFGNVK 410
W L+ + G+++
Sbjct: 149 PTWNSLIAGYARSGHME 165
>gi|115470597|ref|NP_001058897.1| Os07g0150000 [Oryza sativa Japonica Group]
gi|34393394|dbj|BAC82905.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610433|dbj|BAF20811.1| Os07g0150000 [Oryza sativa Japonica Group]
Length = 592
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 227/400 (56%), Gaps = 9/400 (2%)
Query: 71 YAHIIRTHML-HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK 129
YA + + +L H F N ++R+ P+ AL+++ R LPD +T P +++
Sbjct: 68 YAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLIQ 124
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKL 187
A +L AL G LH+ A + G + F ++ + LY G FE A KVFDE P R L
Sbjct: 125 ACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNL 184
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN+++ + +GR E + +F + F PD T+VSV +AC G L L +VH Y
Sbjct: 185 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVY 244
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLA 306
V +V + S + N+LID+Y KCG ++ A ++F E+ V SWTS+IVG AANG
Sbjct: 245 VEKVGLVENSH--VSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFG 302
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
EAL+ F M + P +T VGVL AC H G V +G +F+ MK Y I PR H GC
Sbjct: 303 KEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGC 362
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
MVDLLGRAG +EEA + MP++ N V+W L+G+C +++G+ + L EL+P
Sbjct: 363 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGH 422
Query: 427 DGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G YV+LSN+YA+ G+W +V +R M + K P +SL
Sbjct: 423 SGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNPGHSL 462
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 250/454 (55%), Gaps = 42/454 (9%)
Query: 50 PAKIVATQLSKCTNLLQL-----NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK 104
P + T + + +LLQ N +YA + H H S F +N +I+ Y P +
Sbjct: 1 PPPGLRTGVDETKDLLQRLLLIPNLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQPHE 58
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
++ +Y +S G+ P +T + AS + R LHS R G ES+ FC + I+
Sbjct: 59 SIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLIT 118
Query: 165 LYSKAGDFEKARKVFDEN-------------------------------PERKLGSWNAI 193
Y+K G AR+VFDE P + + SW +
Sbjct: 119 AYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTV 178
Query: 194 IAGLSQDGRAKEAIDMFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
I+G SQ+G EA+ MF+ ++K +P+ +T+VSV AC +LG+LE+ ++ Y +
Sbjct: 179 ISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE-- 236
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALD 311
+ + + N+ I+MY KCG +D+A ++F E+ +Q N+ SW SMI A +G +EAL
Sbjct: 237 NGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALT 296
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F M G +P+ VTFVG+L ACVHGG V +G+ F+ M+ V++I P+ HYGCM+DLL
Sbjct: 297 LFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLL 356
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
GR G L+EA +++ MPMK + V+WG L+GAC GNV++ E ++ L +LEP + G V
Sbjct: 357 GRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCV 416
Query: 432 VLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++SNIYA+ W+ V R+R +MK + K YS
Sbjct: 417 IMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 450
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 226/408 (55%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y R +AL+ Y M G+ PD T+ V+ + QL L++GR+ H
Sbjct: 176 WNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIE 235
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
GL+ + + +Y K G+ E ARK+FD
Sbjct: 236 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWK 295
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
E P++ + WNA+I G R KEA+ +F ++ PD+VTMVS SAC LG
Sbjct: 296 LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGA 355
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L++ + +H Y+ K + + + +LIDMY KCG++ A +VF E+ N +WT++I
Sbjct: 356 LDVGIWIHHYI--EKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAII 413
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G A+ A+ F M ++ + P+ VTF+G+LSAC HGG V+EG+ +F M + + +
Sbjct: 414 SGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNL 473
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY CMVDLLGRAGLLEEA +++ MP++A+ V+WG L AC GNV MGE A
Sbjct: 474 SPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAAS 533
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L +++P G YV+L+N+Y +W+E + R +M+ R + K P S
Sbjct: 534 KLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCS 581
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 195/416 (46%), Gaps = 72/416 (17%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------F 87
L KC ++ QL QI + ++ T ++ A+ F
Sbjct: 13 LEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTF 72
Query: 88 HWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN IR + E P++A+ +Y + G PD YT P++ KA +L + +G ++
Sbjct: 73 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 132
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ LG +S+ F + I L GD + ARK+FD++ R L SWN++I G + G A EA
Sbjct: 133 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEA 192
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ + +K G +PD+VTM+ V S+C L DL+L + H Y+ + + K + N+L+
Sbjct: 193 LNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEE--NGLKLTVPLANALM 250
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN------------------- 307
DMY KCG ++ A K+F + + SWT+M+VGYA +GL +
Sbjct: 251 DMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNA 310
Query: 308 ------------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEMMK 352
EAL F+ M+ I P+ VT V LSAC G + G H+ E
Sbjct: 311 MIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK-- 368
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+++ A ++D+ + G + +A + + +P + N + W ++ GN
Sbjct: 369 --HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGR-NSLTWTAIISGLALHGN 421
>gi|255582129|ref|XP_002531859.1| Cell division protein ftsH, putative [Ricinus communis]
gi|223528509|gb|EEF30537.1| Cell division protein ftsH, putative [Ricinus communis]
Length = 1157
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 242/452 (53%), Gaps = 29/452 (6%)
Query: 22 LHRLCKT--HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQI-YAHIIRTH 78
L +LC + H ++ H I + DT + TQL K ++L + YA I H
Sbjct: 670 LLKLCSSIKHLYQIHSQIQVSGLQGDT------FLVTQLIKFSSLSPSKDLSYAQSILDH 723
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
+H WN +IR Y PK AL +Y M G+ P+ T P +LKA FA +
Sbjct: 724 SVHP--VPLPWNILIRGYADSNTPKDALFVYRNMRNEGIRPNSLTFPFLLKACAACFATK 781
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G+Q+H ++ GL+ + + + ++ Y A KVFDE PER + SWNA+I
Sbjct: 782 EGKQVHVEVIKYGLDCDVYVNNNLVNFYGSCKKILDACKVFDEMPERTVVSWNAVITSCV 841
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ + EAI F+ ++ GFEPD TMV + C +G+L L +H V +
Sbjct: 842 ESLKLGEAIRYFLKMRDFGFEPDGTTMVLMLVICAEMGNLGLGRWIHSQVIE-------R 894
Query: 259 TLMLN-----SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
L+LN +L+DMY K G + A VF + + NV +W++MI+G A +G A E L+ F
Sbjct: 895 GLVLNYQLGTALVDMYAKSGAVGYAKLVFDRMKEKNVWTWSAMILGLAQHGFAKEGLELF 954
Query: 314 -HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
MR S I PN+VTF+GVL AC H G V +G +F M + Y I+P HYG MVD+LG
Sbjct: 955 LDMMRSSLIHPNYVTFLGVLCACSHAGLVSDGFRYFHEMGHTYGIKPMMVHYGAMVDILG 1014
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA----KHLQELEPWSDG 428
RAGLL+EA + MP + + ++W L+ AC +VK VA K L ELEP G
Sbjct: 1015 RAGLLKEAYNFITKMPFQPDPIVWRTLLSACS-IHDVKDSTGVAYKVRKRLLELEPRRSG 1073
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+V+++N+YA G+WE+ ++R VM+ L K
Sbjct: 1074 NFVMVANMYADAGMWEKAAKVRRVMRDGGLKK 1105
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/493 (32%), Positives = 255/493 (51%), Gaps = 43/493 (8%)
Query: 8 ISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSF---LDTHEDPAKIVATQLSKCTNL 64
+S + + + P + + C F I A + + H + T C +
Sbjct: 129 VSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLI 188
Query: 65 LQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
L Q++ I S WN++I Y+++ +A+ ++ M + GV D +TL
Sbjct: 189 LSARQVFDDI-------SDRTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTL 241
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD---- 180
+L AS + L++GR +H V G+E + + I +Y+K G + A+ VFD
Sbjct: 242 VSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLD 301
Query: 181 -------------------EN--------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL 213
EN P + + SWN+II L Q+G+ EA+++F +
Sbjct: 302 KDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRM 361
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
G PDD T+VS+ S C + GDL L Q H Y+ + + NSLIDMY KCG
Sbjct: 362 CISGVMPDDATLVSILSCCSNTGDLALGKQAHCYI--CDNIITVSVTLCNSLIDMYAKCG 419
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
+ A +F+ + + NV SW +I A +G EA++ F M+ SG+ P+ +TF G+LS
Sbjct: 420 ALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLS 479
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
AC H G V G+++F++M + ++I P HY CMVDLLGR G L EA +++ MP+K +V
Sbjct: 480 ACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVKPDV 539
Query: 394 VIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
V+WG L+GAC +GN+++ + + K L EL ++ G YV+LSN+Y+ W+++++IR +M
Sbjct: 540 VVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIM 599
Query: 454 KHRNLAKIPAYSL 466
+ K A S
Sbjct: 600 DDSGIKKCRAISF 612
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 206/424 (48%), Gaps = 46/424 (10%)
Query: 14 RMKS-SHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYA 72
++KS +H LH L + K + + A L + LS C L YA
Sbjct: 33 QLKSPTHQTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLR--YA 90
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-S 131
H++ + F +N++IR Y+ P K+L ++ M AG +P+ +T P VLKA +
Sbjct: 91 HLLFDQI--PQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACA 148
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
+ F E +H+ A++LG+ + ++ ++ Y AR+VFD+ +R + SWN
Sbjct: 149 AKPFYWE-AVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWN 207
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
++IAG S+ G EAI +F + + G E D T+VS+ SA +L+L VH Y+ V
Sbjct: 208 SMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYI--V 265
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA----- 306
+ + D+++ N+LIDMY KCG + A VF ++ +V SWTSM+ YA GL
Sbjct: 266 ITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQ 325
Query: 307 --------------------------NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
EA++ FH M SG+ P+ T V +LS C + G
Sbjct: 326 IFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGD 385
Query: 341 VQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
+ GK H + + N+ + + ++D+ + G L+ A + GMP K NVV W
Sbjct: 386 LALGKQAHCY-ICDNIITVSVTLCN--SLIDMYAKCGALQTAIDIFFGMPEK-NVVSWNV 441
Query: 399 LMGA 402
++GA
Sbjct: 442 IIGA 445
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 243/435 (55%), Gaps = 37/435 (8%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
LL N +YA + H H S F +N +I+ Y P +++ +Y +S G+ P +T
Sbjct: 27 LLIPNLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHT 84
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN- 182
+ AS + R LHS R G ES+ FC + I+ Y+K G AR+VFDE
Sbjct: 85 FNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMS 144
Query: 183 ------------------------------PERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
P + + SW +I+G SQ+G EA+ MF+
Sbjct: 145 KRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLC 204
Query: 213 LKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++K +P+ +T+VSV AC +LG+LE+ ++ Y + + + + N+ I+MY K
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE--NGFFDNIYVCNATIEMYSK 262
Query: 272 CGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
CG +D+A ++F E+ +Q N+ SW SMI A +G +EAL F M G +P+ VTFVG
Sbjct: 263 CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVG 322
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+L ACVHGG V +G+ F+ M+ V++I P+ HYGCM+DLLGR G L+EA +++ MPMK
Sbjct: 323 LLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK 382
Query: 391 ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
+ V+WG L+GAC GNV++ E ++ L +LEP + G V++SNIYA+ W+ V R+R
Sbjct: 383 PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMR 442
Query: 451 AVMKHRNLAKIPAYS 465
+MK + K YS
Sbjct: 443 KLMKKETMTKAAGYS 457
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/412 (36%), Positives = 236/412 (57%), Gaps = 33/412 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+F WN ++R +T + P L +Y +M G LP+ YT +L+A QL L G LH+
Sbjct: 53 SFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHA 112
Query: 146 LAVRLGLESNEFCESGFISLYS-------------------------------KAGDFEK 174
AVRLG E+ +F ++G + LY+ K+G
Sbjct: 113 QAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVV 172
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR++FDE PE+ SW+A+I G +Q G +EA+++F ++ GF P+ +V +AC
Sbjct: 173 ARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAF 232
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG L+ +H YV +++ D ++ +LIDMY KCG ++ A +VF E+ +V ++T
Sbjct: 233 LGALDQGRWIHAYV--DRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDRDVFAFT 290
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
S+I G A +G + A++ F M+ G+ PN VTF+ +LSAC G V+EG F+ M N+
Sbjct: 291 SLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNI 350
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
Y IEP HYGC+VDLLGRAG+LE+A+ +V MP++ + + G L+ AC G+V++G+
Sbjct: 351 YGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKE 410
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L E G +V+LSN+YAS WE+V ++R M+ + + K+P SL
Sbjct: 411 TVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCSL 462
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 146/377 (38%), Gaps = 70/377 (18%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+ S G + F IS S GD A +F P R WN ++ +
Sbjct: 5 KQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 64
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV------- 251
+ ++ + GF P++ T + AC L DL + +H ++
Sbjct: 65 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 124
Query: 252 ----------------------KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
D + ++I+ Y K G++ +A ++F E+ + N
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
SW++MI GYA GL EAL+ F+ M+ +G RPNH VG L+AC G + +G+
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA---------------RAMVEGMPMKA--- 391
+ + R ++D+ + G +E A +++ G+
Sbjct: 245 YVDRNRMVLDRILGTA-LIDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSA 303
Query: 392 ----------------NVVIWGCLMGACEKFGNVKMGEWVAKHLQE---LEPWSDGAYVV 432
N V + CL+ AC + G V+ G + K + +EP Y
Sbjct: 304 TAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQ-HYGC 362
Query: 433 LSNIYASRGLWEEVERI 449
L ++ G+ E+ +R+
Sbjct: 363 LVDLLGRAGMLEDAKRV 379
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 232/444 (52%), Gaps = 69/444 (15%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I++ P KA+ +Y M A P+ YT P VLKA + G Q+H+
Sbjct: 104 FLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAH 163
Query: 147 AVRLGL--------------------------------ESNEFCESGFISLYSKAGDFEK 174
V+ GL E + C + I Y + G+ E
Sbjct: 164 LVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEA 223
Query: 175 ARKVFDENPERKL-GSWNAIIAGLS-------------------------------QDGR 202
AR++F+ P+R + +WNA+I+G S Q+G
Sbjct: 224 ARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGC 283
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA+++F ++K P + SV SAC +LG L+ +H Y ++ + D ++
Sbjct: 284 FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA--KRNSIQLDGVLG 341
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
SL+DMY KCGR+DLA++VF ++ VSSW +MI G A +G A +A+D F M I
Sbjct: 342 TSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIY 398
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN +TFVGVL+AC HGG VQ+G F M+ Y +EP+ HYGC+VDLLGRAGLL EA
Sbjct: 399 PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEK 458
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+V +P + +WG L+GAC K GNV++GE V K L ELEP + G Y +LSNIYA G
Sbjct: 459 VVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGR 518
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
WEEV +R +MK R + P S+
Sbjct: 519 WEEVGEVRKLMKERGIKTTPGTSI 542
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 132/323 (40%), Gaps = 24/323 (7%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAG-----DFEKARKVFDENPERKLGSWNAIIA 195
+Q H+L +R G + + + Y+ FE + +VFD + + WN +I
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
++ +AI ++ + P+ T +V AC G + +QVH ++ VK
Sbjct: 112 VCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHL--VKHGL 169
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFH 314
D +L+S I MY GR+ A ++ + + + W +MI GY G A + F
Sbjct: 170 GGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFE 229
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M + + + S C G V+ + FF+ MK +I + M+D +
Sbjct: 230 GMPDRSMISTWNAMISGFSRC---GMVEVAREFFDEMKERDEIS-----WSAMIDGYIQE 281
Query: 375 GLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY- 430
G EA + M ++ + ++ AC G + G W+ + + DG
Sbjct: 282 GCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLG 341
Query: 431 VVLSNIYASRG----LWEEVERI 449
L ++YA G WE E++
Sbjct: 342 TSLVDMYAKCGRIDLAWEVFEKM 364
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 231/408 (56%), Gaps = 6/408 (1%)
Query: 62 TNLLQLNQIYAHIIRTHMLH---SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
T LL L+ I T L S +F +N++I+ + A+ Y M + ++
Sbjct: 46 TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIV 105
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P YT V+KA L L +G +HS G SN F ++ ++ Y+K+ ARKV
Sbjct: 106 PSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKV 165
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE P+R + +WN++I+G Q+G A EA+++F +++ G EPD T VSV SAC LG L
Sbjct: 166 FDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSL 225
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+L +H+ + V + + + ++ SL++M+ +CG + A VF +++ NV SWT+MI
Sbjct: 226 DLGCWLHECI--VGTGIRMNVVLATSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMIS 283
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G EA++ FH M+ G+ PN VT+V VLSAC H G + EG+ F MK Y +
Sbjct: 284 GYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVV 343
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV-VIWGCLMGACEKFGNVKMGEWVAK 417
P H+ CMVD+ GR GLL EA V G+ + V +W ++GAC+ N +G VA+
Sbjct: 344 PGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAE 403
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L EP + G YV+LSN+YA G + VE +R VM R L K YS
Sbjct: 404 NLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYS 451
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 124/260 (47%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+Q H+ V G + + ++L AG R++F + +N++I S
Sbjct: 27 QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSNF 86
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G + +A+ + + P T SV AC L L L VH +VF S S++
Sbjct: 87 GFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIVHSHVFV--SGYASNSF 144
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +L+ Y K +A KVF E+ Q ++ +W SMI GY NGLA+EA++ F+ MRESG
Sbjct: 145 VQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEVFNKMRESG 204
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ TFV VLSAC G + G E + I +V++ R G + A
Sbjct: 205 GEPDSATFVSVLSACSQLGSLDLGCWLHECIVGT-GIRMNVVLATSLVNMFSRCGDVGRA 263
Query: 381 RAMVEGMPMKANVVIWGCLM 400
RA+ + M + NVV W ++
Sbjct: 264 RAVFDSMN-EGNVVSWTAMI 282
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 245/435 (56%), Gaps = 37/435 (8%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
LL N +YA + LH F +N +I+ Y+ P +++ +Y +S G+ P+ +T
Sbjct: 27 LLIPNLVYAR--KLFDLHRNPCIFLYNKLIQSYSVHHQPHESIVLYNLLSFDGIRPNHHT 84
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN- 182
+ AS + R LHS R G ES+ FC + I+ Y+K G AR+VFDE
Sbjct: 85 FNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTALITAYAKLGALCCARRVFDEMS 144
Query: 183 ------------------------------PERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
P + + SW +I+G SQ+G EA+ MF+
Sbjct: 145 NRDVPVWNAMITGYQRRGDMKAAMELFDSMPNKNVTSWTTVISGFSQNGNYSEALTMFLC 204
Query: 213 LKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++K +P+ +T+VSV AC +LG+LE+ ++ Y + + + + N+ ++MY K
Sbjct: 205 MEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYARE--NGFFDNIYVRNATLEMYSK 262
Query: 272 CGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
CG +D+A ++F EI +Q N+ SW SMI A +G +EAL+ + M + G RP+ VTFVG
Sbjct: 263 CGMIDVAKRLFDEIGNQRNLISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVG 322
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+L ACVHGG V +GK + M+ V++I P+ HYGCM+DLLGR G L+EA +++ MPMK
Sbjct: 323 LLLACVHGGMVLKGKELLKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEACDLIKTMPMK 382
Query: 391 ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
+ V+WG L+GAC GNV++ E ++ L +LEP + G V++SNIYA+ W+ V R+R
Sbjct: 383 PDAVVWGTLLGACSFHGNVEIAEIASEALMKLEPTNPGNCVIMSNIYAANEKWDGVLRMR 442
Query: 451 AVMKHRNLAKIPAYS 465
+MK + K YS
Sbjct: 443 KLMKKETMTKAAGYS 457
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 163/473 (34%), Positives = 244/473 (51%), Gaps = 63/473 (13%)
Query: 55 ATQLSKCTNLLQLNQ---IYAHIIR----------THMLHSYSA---------------- 85
T L+ C N NQ I+AH+IR T ++H YS
Sbjct: 483 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 542
Query: 86 --AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
A+ WN++I Y + ++AL ++ M G+ PDC++L +L + L + GR+L
Sbjct: 543 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 602
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV------------------------- 178
H+ VR +E + + +Y+K G + A KV
Sbjct: 603 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRA 662
Query: 179 ------FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
FD+ +R WN+I+AG + G KE+ + F+ + + E D +TMV++ + C
Sbjct: 663 NDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLC 722
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
SL LE Q+H + + K ++ +L+DMY KCG + A VF ++ N+ S
Sbjct: 723 SSLPALEHGDQLHSLIIK-KGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVS 781
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI GY+ +G + EAL + M + G+ PN VTF+ +LSAC H G V+EG F M+
Sbjct: 782 WNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQ 841
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
Y IE + HY CMVDLLGRAG LE+A+ VE MP++ V WG L+GAC ++ MG
Sbjct: 842 EDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMG 901
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L EL+P + G YV++SNIYA+ G W+EVE IR +MK + + K P S
Sbjct: 902 RLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 954
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 176/344 (51%), Gaps = 17/344 (4%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
++ WN +I Y ++ + ++A I+ M + GV PD +T L+ L + + G+Q+
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQV 298
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
HS + G + + F + I +Y+K D E KVFDE ER +WN+II+ +Q G
Sbjct: 299 HSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A+ +F+ +++ G++ + + S+ A L D+ ++H ++ V++ SD ++ +
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHL--VRNLLNSDIILGS 416
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
+L+DMY KCG ++ A++VF + + N S+ +++ GY G A EAL+ +H M+ E GI+
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQ 476
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFF------EMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
P+ TF +L+ C + +G+ + KN+ +E H + G
Sbjct: 477 PDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII-VETELVH------MYSECGR 529
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
L A+ + M + N W ++ ++ G + + K +Q
Sbjct: 530 LNYAKEIFNRMAER-NAYSWNSMIEGYQQNGETQEALRLFKQMQ 572
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 181/381 (47%), Gaps = 42/381 (11%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGV 117
SKC + + +Q++ ++ + + +N ++ Y + ++AL++Y M S G+
Sbjct: 423 SKCGMVEEAHQVFRSLLERNEVS-------YNALLAGYVQEGKAEEALELYHDMQSEDGI 475
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
PD +T +L GRQ+H+ +R + N E+ + +YS+ G A++
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 535
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+ ER SWN++I G Q+G +EA+ +F ++ G +PD ++ S+ S+C SL D
Sbjct: 536 IFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSD 595
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV---------------- 281
+ ++H ++ V++ + + ++ L+DMY KCG MD A+KV
Sbjct: 596 SQKGRELHNFI--VRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMV 653
Query: 282 ---------------FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
F +++Q N + W S++ GYA GL E+ + F M ES I + +
Sbjct: 654 SAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVL 713
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T V +++ C ++ G ++ + +VD+ + G + +AR + +
Sbjct: 714 TMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDN 773
Query: 387 MPMKANVVIWGCLMGACEKFG 407
M K N+V W ++ K G
Sbjct: 774 MNGK-NIVSWNAMISGYSKHG 793
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y R++ + L +Y M +G D +T P V+KA + + RQL S V
Sbjct: 143 WNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVV 202
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL N F + Y++ G + A DE + +WNA+IAG + +EA
Sbjct: 203 KAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWG 262
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G PD+ T S CG+L + QVH + + K DT + N+LIDM
Sbjct: 263 IFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKL--IACGFKGDTFVGNALIDM 320
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + KVF E+ + N +W S+I A G N+AL F M+ESG + N
Sbjct: 321 YAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNL 380
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA----RAM 383
+L A + +G+ +++N+ + +VD+ + G++EEA R++
Sbjct: 381 GSILMASAGLADIGKGRELHGHLVRNLLNSDIILG--SALVDMYSKCGMVEEAHQVFRSL 438
Query: 384 VEGMPMKANVVIWG 397
+E + N ++ G
Sbjct: 439 LERNEVSYNALLAG 452
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 19/281 (6%)
Query: 67 LNQIYAHIIRTHML------HSYSAAF-HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
LN H R L S+SA F H I+L + P I A
Sbjct: 13 LNHFNCHYSRHFFLLPNPNSKSFSAHFGHTTTTIKL--KFNGPDSPKPTSIHTKPAS--- 67
Query: 120 DCYTLPI--VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG---DFEK 174
D LP +++ + + G+ +H+ + G + + + + LY+++G D
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARK+F+E PER L +WN +I ++ E + ++ ++ G D T SV AC +
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIA 187
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
+ D+ Q+ V VK+ + + +L+D Y + G MD A EI+ +V +W
Sbjct: 188 MEDMGGVRQLQSSV--VKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWN 245
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
++I GY EA F M + G+ P++ TF L C
Sbjct: 246 AVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC 286
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 220/362 (60%), Gaps = 2/362 (0%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+AL+++ ++ + G++P+C T+ VL A L +L++G++LH ++ GLE+ S
Sbjct: 463 EALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSIT 522
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K+G + A + F P + WN +I SQ+G+ + AID+F + G + D V
Sbjct: 523 YMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSV 582
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
++ + SAC + L ++H +V V++ SDT + ++LIDMY KCG++ LA VF
Sbjct: 583 SLSATLSACANYPALYYGKELHCFV--VRNSFISDTFVASTLIDMYSKCGKLALARSVFD 640
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+D N SW S+I Y +G E LD FH M E+GI+P+HVTF+ ++SAC H G V E
Sbjct: 641 MMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDE 700
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
G ++F M Y I R H+ CMVDL GRAG L EA ++ MP + WG L+GAC
Sbjct: 701 GIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGAC 760
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
GNV++ + +KHL EL+P + G YV+LSN++A G WE V ++R++MK + + KIP
Sbjct: 761 RLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPG 820
Query: 464 YS 465
YS
Sbjct: 821 YS 822
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 132/257 (51%), Gaps = 2/257 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR ++ L AL + M + V PD YT P V+KA L + + + +H LA
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G + F S I LY+ G A+ +FDE P R WN ++ G ++G A+
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ +P+ V+ V + S C + G + +Q+H V ++S +SD + N++I M
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLV--IRSGFESDPTVANTIITM 322
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K+F + Q + +W +I GY NG +EA+ F M SG++ + +TF
Sbjct: 323 YSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITF 382
Query: 329 VGVLSACVHGGKVQEGK 345
L + + G ++ K
Sbjct: 383 ASFLPSVLKSGSLKYCK 399
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 13/310 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + AL + M + V P+ + +L + G QLH L +
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G ES+ + I++YSK G+ ARK+FD P+ +WN +IAG Q+G EA+
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G + D +T S + G L+ +VH Y+ V+ D + ++L+D+
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYI--VRHGVPFDVYLKSALVDI 423
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +++A K F + +V+ T+MI GY NGL EAL+ F ++ + G+ PN +T
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTM 483
Query: 329 VGVLSACVHGGKVQEGKHFF-----EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
VL AC ++ GK + ++NV Q+ + + ++G L+ A
Sbjct: 484 ASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITY------MYAKSGRLDLAYQF 537
Query: 384 VEGMPMKANV 393
MP+K +V
Sbjct: 538 FRRMPVKDSV 547
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 11/255 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I +++ P+ A+D++ M +G D +L L A AL G++LH V
Sbjct: 549 WNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVV 608
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R S+ F S I +YSK G AR VFD + SWN+IIA GR +E +D
Sbjct: 609 RNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLD 668
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN---SL 265
+F + + G +PD VT + + SACG G ++ + Y F+ +++ + +
Sbjct: 669 LFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGI----YYFRCMTEEYGICARMEHFACM 724
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+D+YG+ GR+ A+ + P+ +W S++ +G A ++ E + PN
Sbjct: 725 VDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVE--LDPN 782
Query: 325 HVTFVGVLSACVHGG 339
+ + +LS VH G
Sbjct: 783 NSGYYVLLSN-VHAG 796
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 6/263 (2%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H+ + G+ + S + +Y F+ +F WN +I G S
Sbjct: 96 RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A+ F + PD T V ACG L ++ L VH+ + D
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHM--DLF 213
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +SLI +Y G + A +F E+ + W M+ GY NG N AL F MR S
Sbjct: 214 IGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
++PN V+FV +LS C G V+ G + +++ ++ +P A+ ++ + + G L +
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIITMYSKCGNLFD 331
Query: 380 ARAMVEGMPMKANVVIWGCLMGA 402
AR + + MP + + V W L+
Sbjct: 332 ARKIFDIMP-QTDTVTWNGLIAG 353
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/412 (37%), Positives = 231/412 (56%), Gaps = 36/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN ++ Y R + +++ ++I M + V P+ TL ++L A +L L G+ +++
Sbjct: 205 WNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNK 264
Query: 147 AVRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDEN----------------------- 182
++ G+ E N E+ I +++ G+ + AR VFDE
Sbjct: 265 YIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDL 324
Query: 183 --------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
PER SW A+I G + R KE + +F ++ +PD+ TMVS+ +AC
Sbjct: 325 ARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAH 384
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG LEL Y+ K+K K+DT + N+LIDMY KCG ++ A K+F E+ + + +WT
Sbjct: 385 LGALELGEWAKTYI--DKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWT 442
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
+MIVG A NG EAL F YM E+ + P+ +T++GV+ AC H G V +GKHFF M
Sbjct: 443 AMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQ 502
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ I+P HYGCMVDLLGRAG L+EA ++ MP+K N ++WG L+GAC NV++ E
Sbjct: 503 HGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEM 562
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A + ELEP + YV+L NIYA+ W+ + +R +M R + KIP SL
Sbjct: 563 AANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCSL 614
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 188/398 (47%), Gaps = 68/398 (17%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSY------------------------------SAAF 87
L C + ++NQI++ I+T + ++ + F
Sbjct: 42 LETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVF 101
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I+ Y+R+ + + +Y M + PD +T P +LK + AL+ G+ L + A
Sbjct: 102 IWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHA 161
Query: 148 VRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V G L+SN F + GFI L+S G ARK+FD ++ +WN +++G ++ R +E+
Sbjct: 162 VIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEES 221
Query: 207 IDMFIGL-KKCG-FEPDDVTMVSVTSACGSLGDLELALQVH-KYVFQVKSKQKSDTLMLN 263
+FI + KKC P+ VT+V + SAC L DL ++ KY+ + + + ++ N
Sbjct: 222 KRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKE--GIVEPNLILEN 279
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN---GLA-------------- 306
+LIDM+ CG MD A VF E+ +V SWTS++ G+A LA
Sbjct: 280 ALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVS 339
Query: 307 --------------NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
E L F M+ S ++P+ T V +L+AC H G ++ G+ + +
Sbjct: 340 WTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGE-WAKTYI 398
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+ +I+ ++D+ + G +E+A+ + M K
Sbjct: 399 DKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKK 436
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 144/341 (42%), Gaps = 17/341 (4%)
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDEN 182
PI L +C EI Q+HS ++ GL SN + I ++GD ARKVFDE
Sbjct: 38 PISLLETCNTM-YEIN-QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEI 95
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P+ + WN +I G S+ ++ + ++ + +PD T + ++AL
Sbjct: 96 PQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK----DMAL 151
Query: 243 QVHKYVFQ---VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+ K + + S+ + I ++ CG ++ A K+F D V +W ++ G
Sbjct: 152 KYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSG 211
Query: 300 YAANGLANEALDCFHYMRE--SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
Y E+ F M + + PN VT V +LSAC + GK + +
Sbjct: 212 YNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIV 271
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP ++D+ G ++ AR + + M + +V+ W ++ F N + K
Sbjct: 272 EPNLILENALIDMFASCGEMDAARGVFDEMKTR-DVISWTSIVTG---FANTCRIDLARK 327
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ ++ ++ + + Y ++EV + M+ N+
Sbjct: 328 YFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNV 368
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 237/428 (55%), Gaps = 38/428 (8%)
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC 132
H+ R+H W + I L+ R +A + M AGV P+ T + L ++C
Sbjct: 41 HLTRSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITF-LTLLSAC 99
Query: 133 QLFALE---IGRQLHSLAVRLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
F LE G +H+ +LGL++ N + + +YSK G + A +FDE R
Sbjct: 100 TDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSV 159
Query: 189 SWNAIIAGLSQDGRAKEAIDMF--------------IG-----------------LKKCG 217
SWN +I G ++G EAI +F IG ++ G
Sbjct: 160 SWNTMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAG 219
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
EPD VT++SV +AC +LG L L L ++++V +K K + + NSLIDMY +CG + L
Sbjct: 220 VEPDYVTIISVLAACANLGALGLGLWINRFV--MKQDFKDNIKISNSLIDMYSRCGCIRL 277
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A +VF ++ + ++ SW SMIVG+A NG A EAL+ F+ MR+ G RP+ V+F G L+AC H
Sbjct: 278 ARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSH 337
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V EG FF++MK +I PR HYGC+VDL RAG LE+A ++ MPMK N V+ G
Sbjct: 338 SGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLG 397
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ AC G+V + E + K+L E++P SD YV+LSNIYA+ G W+ ++R MK
Sbjct: 398 SLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALG 457
Query: 458 LAKIPAYS 465
+ K P +S
Sbjct: 458 IHKKPGFS 465
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 207/331 (62%), Gaps = 3/331 (0%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+ +G +HS+ +R G S + ++ + LY+ GD A KVFD+ PE+ L +WN++I G
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+++G+ +EA+ ++ + G +PD T+VS+ SAC +G L L +VH Y+ +V +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
+ N L+D+Y +CGR++ A +F E+ N SWTS+IVG A NG EA++ F YM
Sbjct: 124 LHSS--NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 317 RES-GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
+ G+ P +TFVG+L AC H G V+EG +F M+ Y+IEPR H+GCMVDLL RAG
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
+++A ++ MPM+ NVVIW L+GAC G+ + E+ + +LEP G YV+LSN
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 301
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+YAS W +V++IR M + K+P +SL
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSL 332
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 129/241 (53%), Gaps = 9/241 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + P++AL +Y M+ G+ PD +T+ +L A ++ AL +G+++H +
Sbjct: 57 WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 116
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL N + + LY++ G E+A+ +FDE ++ SW ++I GL+ +G KEAI+
Sbjct: 117 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE 176
Query: 209 MFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSL 265
+F ++ G P ++T V + AC G ++ + Y +++ + K + + +
Sbjct: 177 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCM 233
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+D+ + G++ AY+ + QPNV W +++ +G + L F ++ + PN
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQILQLEPN 291
Query: 325 H 325
H
Sbjct: 292 H 292
>gi|115475551|ref|NP_001061372.1| Os08g0249600 [Oryza sativa Japonica Group]
gi|113623341|dbj|BAF23286.1| Os08g0249600 [Oryza sativa Japonica Group]
Length = 951
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 223/419 (53%), Gaps = 41/419 (9%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
SA H N +IR P AL +Y + RAG P +TLP +LK+ A+ R L
Sbjct: 170 SADLH-NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGL 228
Query: 144 ----HSLAVRLGLE-----SNEFCE---------------------------SGFISLYS 167
H+ AV+LGL SN + I+ Y+
Sbjct: 229 ALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYA 288
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
+AG AR +FDE P R SW+A++ G Q G +EA+ +F ++ G PDD +V
Sbjct: 289 RAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVG 348
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEID 286
V +AC LG LE VH Y+ K+ T+ L + L+DMY KCG M LA +VF +
Sbjct: 349 VLAACAQLGVLEQGKWVHGYL---KANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ NV +WT+MI G A +G +EAL+ F M G++P+ + F+G L AC H G V +G+
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ M Y I+P+ HYGCMVDLL R GLL EAR MVE MPMK + +IWG LM C
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NV++ E+V KH ELEP GAYV+L NIYA+ G IR +M+ + + K P S
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCS 584
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 280 bits (717), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 223/377 (59%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + ++AL +++ M R G PD T +L A+ ALE +++HS A+
Sbjct: 404 WNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAI 463
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL + + + +Y+K G+ A++VFD+ ER + +W +I+GL+Q G EA
Sbjct: 464 DAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFS 522
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G PD T VS+ SAC S G LE +VH + V + SD + N+L+ M
Sbjct: 523 LFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHA--VNAGLVSDLRVGNALVHM 580
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A +VF ++ + +V SWT MI G A +G +ALD F M+ G +PN +F
Sbjct: 581 YAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSF 640
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSAC H G V EG+ F + Y IEP HY CMVDLLGRAG LEEA+ + MP
Sbjct: 641 VAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMP 700
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ WG L+GAC +GN++M E+ AK +L+P S YV+LSNIYA+ G WE+
Sbjct: 701 IEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLL 760
Query: 449 IRAVMKHRNLAKIPAYS 465
+R++M+ R + K P S
Sbjct: 761 VRSMMQRRGIRKEPGRS 777
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 163/320 (50%), Gaps = 7/320 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +A I++ M + G +PD T +L A E +++H AV
Sbjct: 303 WNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAV 362
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+GL S+ S F+ +Y + G + A+ +FD+ R + +WNA+I G++Q +EA+
Sbjct: 363 EVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALS 422
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ GF PD T V++ SA LE +VH Y D + N+L+ M
Sbjct: 423 LFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAG---LVDLRVGNALVHM 479
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG A +VF ++ + NV++WT MI G A +G +EA F M GI P+ T+
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQI-EPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V +LSAC G ++ K N + + R + +V + + G +++AR + + M
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGN--ALVHMYAKCGSVDDARRVFDDM 597
Query: 388 PMKANVVIWGCLMGACEKFG 407
++ +V W ++G + G
Sbjct: 598 -LERDVYSWTVMIGGLAQHG 616
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 9/362 (2%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+I Y + A+ +Y M R G P+ T +LKA C +L+ G+++H+ ++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
+S+ E+ +++Y K G + A+ +FD+ ER + SW +I GL+ GR +EA F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+++ GF P+ T VS+ +A S G LE +VH + V + D + N+L+ MY K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHA--VNAGLALDLRVGNALVHMYAK 178
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
G +D A VF + + ++ SWT MI G A +G EA F M G PN T++ +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238
Query: 332 L--SACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
L SA G ++ K + K + + R + ++ + + G +++AR + +GM
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGN--ALIHMYAKCGSIDDARLVFDGMC 296
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVE 447
+ +V+ W ++G + G + +Q+ D Y+ L N + S G WE V+
Sbjct: 297 DR-DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVK 355
Query: 448 RI 449
+
Sbjct: 356 EV 357
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 162/328 (49%), Gaps = 17/328 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC--QLFALEIGRQLH 144
F W +I + ++A +++ M R G LP+ T +L AS ALE +++H
Sbjct: 198 FSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVH 257
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
A + G S+ + I +Y+K G + AR VFD +R + SWNA+I GL+Q+G
Sbjct: 258 KHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGH 317
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F+ +++ GF PD T +S+ + S G E +VHK+ +V SD + ++
Sbjct: 318 EAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV--GLVSDLRVGSA 375
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+ MY +CG +D A +F ++ NV++W +MI G A EAL F MR G P+
Sbjct: 376 FVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPD 435
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNV--YQIEPRFAHY---GCMVDLLGRAGLLEE 379
TFV +LSA V G+ E +K V Y I+ +V + + G
Sbjct: 436 ATTFVNILSANV-------GEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMY 488
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFG 407
A+ + + M ++ NV W ++ + G
Sbjct: 489 AKQVFDDM-VERNVTTWTVMISGLAQHG 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNV 354
MI GYA G A +A+ + MR G +PN +T++ +L AC ++ GK ++++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+Q + R +V++ + G +++A+ + + M ++ NV+ W ++G +G + E
Sbjct: 61 FQSDVRVE--TALVNMYVKCGSIDDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQ--EA 115
Query: 415 VAKHLQ-ELEPWSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
+ LQ + E + +Y +S N AS G E V+ + + + LA
Sbjct: 116 FHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 163
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 227/384 (59%), Gaps = 6/384 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N++I+ ++L P + Y M + V P YT V+K+ L AL+IG+ +H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGVHCH 132
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV G + + ++ ++ YSK GD E AR+VFD PE+ + +WN++++G Q+G A++A
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEKSVVAWNSLVSGFEQNGLAEDA 192
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I +F +++ GFEPD T VS+ SAC G + L VH+Y+ V + + +LI
Sbjct: 193 IRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYI--VSEGLDVNVKLGTALI 250
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNH 325
++Y +CG + A +VF ++ + NV++WT+MI Y +G +A+D F+ M + G PN+
Sbjct: 251 NLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNN 310
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTFV VLSAC H G V++G+ ++ M Y++ P H+ C+VD+LGRAG L+EA ++
Sbjct: 311 VTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAYRFIQ 370
Query: 386 GMPMKANVV---IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ N +W ++GAC+ N +G +AK L LEP + G +V+LSNIYA G
Sbjct: 371 QLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYALSGK 430
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
+EV IR M NL K YS+
Sbjct: 431 TDEVSHIRDRMMRNNLRKQVGYSI 454
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 280 bits (717), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 152/377 (40%), Positives = 220/377 (58%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + ++AL +++ M R G +PD T +L A+ ALE +++HS A
Sbjct: 593 WNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHAT 652
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL + + + YSK G+ + A++VFD+ ER + +W +I GL+Q G +A
Sbjct: 653 DAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFS 711
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ + + G PD T VS+ SAC S G LE +VH + V + SD + N+L+ M
Sbjct: 712 HFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHA--VSAGLVSDLRVGNALVHM 769
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A VF ++ + +V SWT MI G A +G EALD F M+ G +PN ++
Sbjct: 770 YAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSY 829
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL+AC H G V EG+ F M Y IEP HY CMVDLLGRAGLLEEA + MP
Sbjct: 830 VAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMP 889
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + WG L+GAC +GN++M E+ AK +L+P S YV+LSNIYA+ G WE+
Sbjct: 890 IEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLL 949
Query: 449 IRAVMKHRNLAKIPAYS 465
+R++M+ + + K P S
Sbjct: 950 VRSMMQRKGIRKEPGRS 966
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 195/404 (48%), Gaps = 27/404 (6%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
+C L Q++ +++ ++ + W +I Y + A+ +Y M + P
Sbjct: 165 RCGRLQCARQVFDKLLKKNI-------YIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQP 217
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ T +LKA C L+ G+++H+ ++ G +S+ E+ +++Y K G E A+ +F
Sbjct: 218 NEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIF 277
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ ER + SW +I GL+ GR +EA +F+ +++ GF P+ T VS+ +A S G LE
Sbjct: 278 DKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALE 337
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+VH + V + D + N+L+ MY K G +D A VF + + ++ SWT MI G
Sbjct: 338 WVKEVHSHA--VNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
A +G EA F M+ +G PN T++ +L+A E +K V++
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSA-----LEWVKVVHKHAE 450
Query: 360 RFAHY------GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
++ + + G +++AR + +GM + +V+ W +MG + G
Sbjct: 451 EAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMMGGLAQNGCGHEAF 509
Query: 414 WVAKHLQE--LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKH 455
V +Q+ L P S Y+ L N + S + +E + V KH
Sbjct: 510 TVFLQMQQEGLVPDST-TYLSLLNTHGST---DALEWVNEVHKH 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 163/320 (50%), Gaps = 7/320 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + +A +++ M + G++PD T +L ALE ++H AV
Sbjct: 492 WNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAV 551
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL S+ S FI +Y + G + AR +FD+ R + +WNA+I G +Q +EA+
Sbjct: 552 ETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALS 611
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ GF PD T +++ SA LE +VH + D + N+L+
Sbjct: 612 LFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH---ATDAGLVDLRVGNALVHT 668
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A +VF ++ + NV++WT MI G A +G ++A F M GI P+ T+
Sbjct: 669 YSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTY 728
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQI-EPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V +LSAC G ++ K + + + R + +V + + G +++AR++ + M
Sbjct: 729 VSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGN--ALVHMYAKCGSIDDARSVFDDM 786
Query: 388 PMKANVVIWGCLMGACEKFG 407
++ +V W ++G + G
Sbjct: 787 -VERDVFSWTVMIGGLAQHG 805
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 162/323 (50%), Gaps = 7/323 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC--QLFALEIGRQLH 144
F W +I + ++A +++ M R G LP+ T +L AS ALE + +H
Sbjct: 387 FSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVH 446
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
A G S+ + I +Y+K G + AR VFD +R + SWNA++ GL+Q+G
Sbjct: 447 KHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGH 506
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F+ +++ G PD T +S+ + GS LE +VHK+ V++ SD + ++
Sbjct: 507 EAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHA--VETGLISDFRVGSA 564
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
I MY +CG +D A +F ++ +V++W +MI G A EAL F M+ G P+
Sbjct: 565 FIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPD 624
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+ +LSA V ++ K + ++ R + +V + G ++ A+ +
Sbjct: 625 ATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGN--ALVHTYSKCGNVKYAKQVF 682
Query: 385 EGMPMKANVVIWGCLMGACEKFG 407
+ M ++ NV W ++G + G
Sbjct: 683 DDM-VERNVTTWTMMIGGLAQHG 704
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 163/307 (53%), Gaps = 8/307 (2%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K A+ + + G+ D ++ +L+ + + + +Q+H ++ G+E N + +
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK-CGFEPD 221
+ +Y + G + AR+VFD+ ++ + W +I G ++ G A++A+ ++ +++ CG +P+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG-QPN 218
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
++T +S+ AC +L+ ++H ++ Q S +SD + +L++MY KCG ++ A +
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQ--SGFQSDVRVETALVNMYVKCGSIEDAQLI 276
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++ + NV SWT MI G A G EA F M+ G PN T+V +L+A G +
Sbjct: 277 FDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGAL 336
Query: 342 QEGKHFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ K N ++ R + +V + ++G +++AR + +GM + ++ W ++
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGN--ALVHMYAKSGSIDDARVVFDGMTER-DIFSWTVMI 393
Query: 401 GACEKFG 407
G + G
Sbjct: 394 GGLAQHG 400
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 9/252 (3%)
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
AK+A+ M + G D + V++ C D+ LA QVH V +KS + + +
Sbjct: 99 AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVH--VCIIKSGMEQNLYVA 156
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N L+ +Y +CGR+ A +VF ++ + N+ WT+MI GYA G A +A+ + MR+ +
Sbjct: 157 NKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQ 216
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN +T++ +L AC ++ GK ++++ +Q + R +V++ + G +E+A+
Sbjct: 217 PNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TALVNMYVKCGSIEDAQ 274
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS--NIYAS 439
+ + M ++ NV+ W ++G +G + + +Q E + +Y +S N AS
Sbjct: 275 LIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQR-EGFIPNSYTYVSILNANAS 332
Query: 440 RGLWEEVERIRA 451
G E V+ + +
Sbjct: 333 AGALEWVKEVHS 344
>gi|222640201|gb|EEE68333.1| hypothetical protein OsJ_26615 [Oryza sativa Japonica Group]
Length = 983
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/419 (39%), Positives = 223/419 (53%), Gaps = 41/419 (9%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
SA H N +IR P AL +Y + RAG P +TLP +LK+ A+ R L
Sbjct: 170 SADLH-NALIRALAGSARPHLALPLYAHLLRAGHHPTPHTLPSLLKSLALSPAVPGARGL 228
Query: 144 ----HSLAVRLGLE-----SNEFCE---------------------------SGFISLYS 167
H+ AV+LGL SN + I+ Y+
Sbjct: 229 ALAVHAHAVKLGLAGFLLVSNALIRVHAGILGRLSDALVLLRTAASVDASTFNTLITAYA 288
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
+AG AR +FDE P R SW+A++ G Q G +EA+ +F ++ G PDD +V
Sbjct: 289 RAGRVTDARALFDEMPARNAVSWSAMVNGYVQAGDGREALGLFARMQADGVRPDDTVLVG 348
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEID 286
V +AC LG LE VH Y+ K+ T+ L + L+DMY KCG M LA +VF +
Sbjct: 349 VLAACAQLGVLEQGKWVHGYL---KANNIRITVFLGTALVDMYAKCGEMQLAMEVFKVMK 405
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ NV +WT+MI G A +G +EAL+ F M G++P+ + F+G L AC H G V +G+
Sbjct: 406 EKNVLAWTTMIKGLAMHGRGSEALELFSQMERLGVKPDDIAFIGALCACTHTGLVDKGRE 465
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ M Y I+P+ HYGCMVDLL R GLL EAR MVE MPMK + +IWG LM C
Sbjct: 466 LFDSMVRKYGIKPKIEHYGCMVDLLARNGLLNEAREMVEKMPMKPDALIWGALMAGCRFH 525
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NV++ E+V KH ELEP GAYV+L NIYA+ G IR +M+ + + K P S
Sbjct: 526 KNVELAEYVVKHWIELEPDKSGAYVLLGNIYAASGRHASAREIRHLMREKGVDKTPGCS 584
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I +T+ + A+DI+ M + D YT VL A + AL+ G+Q+H+ +
Sbjct: 243 WTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYII 302
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + N F S + +Y K + + A VF + + + SW A++ G Q+G ++EA+
Sbjct: 303 RTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVK 362
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++K G EPDD T+ SV S+C +L LE Q H + S S + N+L+ +
Sbjct: 363 TFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARA--LTSGLISFITVSNALVTL 420
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ ++++F EI + +WT+++ GYA G ANE + F M G++P+ VTF
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC G V++G FE M N + I P HY CM+DL RAG +EEAR + MP
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + W L+ +C +GN+ +G+W A+ L EL+P + +YV+LS++YA++G WEEV R
Sbjct: 541 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 600
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ + L K P S
Sbjct: 601 LRKDMRDKGLRKEPGCS 617
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 150/364 (41%), Gaps = 73/364 (20%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+LK C+ + LHS ++ F + IS Y+K G A KVFD+ P
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKK---------------CG-------------- 217
L SWN I++ S+ GR E +F + + CG
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK 134
Query: 218 ----FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK-- 271
F + +T ++ G ++L Q+H +V VK S + + L+DMY K
Sbjct: 135 NDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHV--VKFGFMSYVFVGSPLVDMYSKMG 192
Query: 272 -----------------------------CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
CGR++ + ++F+E+ + + SWTSMI G+
Sbjct: 193 MISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQ 252
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRF 361
NGL +A+D F M+ ++ + TF VL+AC +QEGK +++ Y+
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
A +VD+ + ++ A A+ + M K NVV W ++ +G E K +
Sbjct: 313 A--SALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVG---YGQNGYSEEAVKTFSD 366
Query: 422 LEPW 425
++ +
Sbjct: 367 MQKY 370
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 53/278 (19%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV- 290
C + A +H ++ +K+ +T +LN+LI Y K G + A KVF ++ PN+
Sbjct: 19 CCETHNFTKAKNLHSHI--IKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLY 76
Query: 291 ------------------------------SSWTSMIVGYAANGLANEALDCFHYM--RE 318
SW S+I GYA GL +++ ++ M +
Sbjct: 77 SWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKND 136
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHF------FEMMKNVYQIEPRFAHYGCMVDLLG 372
N +TF +L G V+ G+ F M V+ P +VD+
Sbjct: 137 GSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSP-------LVDMYS 189
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
+ G++ AR + + +P K NVV++ L+ + G V+ + + ++E + S +
Sbjct: 190 KMGMISCARKVFDELPEK-NVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSIS---WTS 245
Query: 433 LSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRL 470
+ + GL + I MK NL ++ Y+ + L
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENL-QMDQYTFGSVL 282
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 211/378 (55%), Gaps = 8/378 (2%)
Query: 89 WNNIIRLYTRLEAPKK-ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ + K+ AL + M R GV P+ YT VL A L +H+
Sbjct: 138 WTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLT---AVHAST 194
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL+S+ F S I Y K GD + R+VFDE R L WN+IIAG +Q G AI
Sbjct: 195 VKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAI 254
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F+ +K GF + T+ SV AC + LE QVH +V K D ++ N+L+D
Sbjct: 255 ELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVL----KYDRDLILHNALLD 310
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG ++ A +F + Q +V SW++M+ G A NG + EAL F M+ G+ PNHVT
Sbjct: 311 MYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVT 370
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VGVL AC H G V++G H+F MK ++ I+P H+ CMVDLLGRAG L+EA + GM
Sbjct: 371 MVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGM 430
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
++ + VIW L+GAC N + + A+ + +LEP GA V+LSN YA W + E
Sbjct: 431 SLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAE 490
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ M+ R + K P S
Sbjct: 491 KPWKAMRDRGMRKEPGRS 508
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 10/253 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL-SQDGRAKEAIDMFIGLKK 215
F + S+Y+K G + A ++FD P R + +W ++A L S DGR +EA+ + +++
Sbjct: 105 FVSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRR 164
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G P+ T SV AC + G L VH VK+ SD + +SLID Y K G +
Sbjct: 165 DGVAPNAYTFSSVLGACTTPGMLT---AVHAST--VKAGLDSDVFVRSSLIDAYVKLGDL 219
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
D +VF E+ ++ W S+I G+A +G A++ F M+++G N T VL AC
Sbjct: 220 DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRAC 279
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
++ G+ ++ +V + + + ++D+ + G LE+A A+ MP + +V+
Sbjct: 280 TGMVMLEAGR---QVHAHVLKYDRDLILHNALLDMYCKCGSLEDADALFHRMPQR-DVIS 335
Query: 396 WGCLMGACEKFGN 408
W ++ + G
Sbjct: 336 WSTMVSGLAQNGK 348
>gi|225424875|ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Vitis vinifera]
Length = 607
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 249/444 (56%), Gaps = 37/444 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRT-------------HMLHSYS-----------------AAF 87
L+ CT + QL Q++A IRT +LH S +F
Sbjct: 33 LNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSF 92
Query: 88 HWNNIIRLYTRLEAPKK-ALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN +IR R K+ A+ +Y M G V+ D +T P VLKA LFAL G Q+H+
Sbjct: 93 MWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHA 152
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++LG +S+ + + + Y+ + A+ VFD ER L SWN +I + G
Sbjct: 153 QILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDA 212
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-VKSKQKSDTLMLNS 264
A+++F ++K FEPD T+ S+ +AC +G L L + H ++ + + + +D L+ S
Sbjct: 213 ALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGMWAHVFLLKKFDADRVNDVLLNTS 271
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRP 323
L+DMY KCG ++LA ++F + + +V+SW SMI+G++ +G AL+ F M R + P
Sbjct: 272 LVDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMP 331
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N +TFVGVLSAC HGG V EG+ +F++M Y+I+P HYGC+VDLL RAGL++EA +
Sbjct: 332 NAITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDV 391
Query: 384 VEGMPMKANVVIWGCLMGA-CEKFGNVKMGEWVAKHLQELEPW-SDGAYVVLSNIYASRG 441
V MPM+ ++VIW L+ A C++ V++ E +A+ + E E G YV+LS +YAS
Sbjct: 392 VSNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASAS 451
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W +V +R +M + + K P S
Sbjct: 452 RWNDVGMVRKLMTDKGVVKEPGCS 475
>gi|357487543|ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
gi|355515394|gb|AES97017.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
Length = 565
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/418 (40%), Positives = 243/418 (58%), Gaps = 13/418 (3%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK-KALDIY---IFMS 113
L++ ++ + QI+A I+RT +H+ +F WN +I+ Y++ K KA+ +Y I
Sbjct: 21 LNQSNSISHVKQIHAQILRT--IHT-PNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQ 77
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ PD +T P VLKA LF+L G+Q+H+ ++LG E + + + I Y+ G E
Sbjct: 78 ENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLE 137
Query: 174 KARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
ARKVFD E R + SWN +I ++ G + MF + K +EPD TM SV AC
Sbjct: 138 TARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKV-YEPDCYTMQSVIRAC 196
Query: 233 GSLGDLELALQVHKYVFQVKSKQK-SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
G LG L L + VH +V + K D L+ L+DMY KCG +++A +VF + +VS
Sbjct: 197 GGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVS 256
Query: 292 SWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW S+I+G+A +G A ALD F M + I PN +TFVGVLSAC H G V EG +FEM
Sbjct: 257 SWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEM 316
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK-FGNV 409
M Y +EP HYGC+VDL RAG ++EA +V MP+K + VIW L+ AC K +V
Sbjct: 317 MTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASV 376
Query: 410 KMGEWVAKHLQELE-PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
++ E +AK + E GAYV+LS +YAS W +V +R +M + ++K P SL
Sbjct: 377 ELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSL 434
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 219/380 (57%), Gaps = 4/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I Y + + AL ++ + G L PD TL L +L L++G+++H L
Sbjct: 198 WNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLF 257
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G + F S I +YSK G E ARKVFD P R W ++IAG +Q KEAI
Sbjct: 258 TGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAI 317
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F ++ GF D T+ V SACG G L +H Y ++ + D N+LI
Sbjct: 318 ELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYC--ERNSIEMDLNARNALIG 375
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHV 326
MY KCG + A ++F + QP++ SW+++I G A NG +++AL F M S IRPN +
Sbjct: 376 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEI 435
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVL AC HGG V +G ++F M +Y + P HYGCMVDLLGRA LL EA +
Sbjct: 436 TFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRT 495
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P++ +VVIW L+ AC GN+++ E+ AK ++ELEP GA V+LSN+YAS W +V
Sbjct: 496 LPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 555
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
+R+R M + + K P S
Sbjct: 556 KRVRKDMATQRIKKQPGCSF 575
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 203/414 (49%), Gaps = 28/414 (6%)
Query: 4 LVPGISLSSLRMKS--------------SHPLLHRLCKTHTFRKHVTISAASSFLDTHED 49
L+P IS+S R + S LL L +F + ++ + AS
Sbjct: 3 LLPSISISIPRRRPWGWAWGYRQSYHNFSLSLLQNLSHPRSFNQILSHAIASGVFRDPVV 62
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
+K++ LS + ++ I + ++ F WN + R Y+R P + + +Y
Sbjct: 63 SSKLLYYSLSHDHDFAFSRTLFFQIHKPNV-------FSWNFMFRAYSRSSFPAETIALY 115
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M R G LPD Y+ P VLKA +L L GR++HS ++LG+ + F ++ IS +S
Sbjct: 116 NLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSC 175
Query: 170 GDFEKARKVFDENPE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMV 226
G E AR VFD P R + SWN++I+G Q R + A+ +F L G PD+VT+V
Sbjct: 176 GAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLV 235
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
S S CG LG L+L ++H S D + +SLIDMY KCG+++ A KVF I
Sbjct: 236 SALSVCGRLGLLDLGKKIHGLF--TGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIP 293
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
N WTSMI GYA + L EA++ F M+ G + T VLSAC H G + +G+
Sbjct: 294 HRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGR- 352
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + IE ++ + + G +++A + G+ + ++ W ++
Sbjct: 353 WIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGL-TQPDIFSWSAVI 405
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 112/259 (43%), Gaps = 17/259 (6%)
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
DF +R +F + + + SWN + S+ E I ++ + + G PD+ + V
Sbjct: 76 DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLK 135
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--P 288
AC L L ++H ++ D + N+LI + CG ++ A VF +
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHL--DVFVQNALISAFSSCGAVEAARAVFDMLPALVR 193
Query: 289 NVSSWTSMIVGYAANGLANEALDCF-HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
+V SW SMI GY + AL F + + + P+ VT V LS C G + GK
Sbjct: 194 DVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKI 253
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG------ 401
+ + F ++D+ + G +E+AR + + +P + N V W ++
Sbjct: 254 HGLFTGSGFVLDVFVG-SSLIDMYSKCGQIEDARKVFDRIPHR-NTVCWTSMIAGYAQSD 311
Query: 402 ----ACEKFGNVKMGEWVA 416
A E F +++G + A
Sbjct: 312 LFKEAIELFREMQIGGFAA 330
>gi|225450551|ref|XP_002277430.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 500
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/415 (36%), Positives = 231/415 (55%), Gaps = 32/415 (7%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ + + +N + R+Y P AL ++ M R G PD YT P +LKA L L G++
Sbjct: 50 HPSTYLYNTMFRVYAASPTPLHALLLHRHMLRHGPPPDTYTFPFLLKACSALAHLPKGQE 109
Query: 143 LHSLAVRLGLESNEFCESGFISLY-SKAG------------------------------D 171
LH A++ GL + F E+ I LY S +G
Sbjct: 110 LHCQALKFGLGGHVFVENSLIHLYGSNSGMDSARRVFDGMGYRDIASWTTLLACYANSCS 169
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ ARKVFDE PER + S++A+IA + R +EA+D+F L EP D ++SV A
Sbjct: 170 VKAARKVFDEMPERSVISYSAMIAAYVRGNRFREALDLFRELFSVKIEPSDSCVMSVLCA 229
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C +LG L++ V+ YV Q K D+ + +LIDM+ KCG ++ A VF + +V
Sbjct: 230 CANLGALDVGRWVYSYVCQSKGDY-VDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVG 288
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
WT+M+ G A +GL + ++ F M +SG++PN VTFV +LS C H G V EG ++F+ M
Sbjct: 289 EWTAMLSGLAMHGLGEQLIEAFEKMVDSGVKPNGVTFVALLSGCSHSGLVNEGLYYFDRM 348
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
++ + +EP H+GC+VDLLGRAGL+++A ++ MP + N IWG L+ AC + NV++
Sbjct: 349 ESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEI 408
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
GE A+ L + EPW+ Y+ L ++Y G W+EVE+++ MK K P SL
Sbjct: 409 GELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSL 463
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 237/417 (56%), Gaps = 18/417 (4%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI-FMSRAGV 117
SKC L ++ I +++ W ++I Y + E AL ++ F+
Sbjct: 1188 SKCGQLKDARALFDEIPLRNVVS-------WTSMITGYVQNEQADNALLLFKDFLEEETE 1240
Query: 118 LPDCYTLPI-------VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
+ D +P+ VL A ++ I +H V+ G + + + + Y+K G
Sbjct: 1241 VEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG 1300
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVT 229
++KVFD E+ SWN++IA +Q G + EA+++F G+ + G + VT+ +V
Sbjct: 1301 QPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVL 1360
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC G L +H V +K + + + S+IDMY KCGR+++A K F + + N
Sbjct: 1361 LACAHAGALRAGKCIHDQV--IKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKN 1418
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SWT+M+ GY +G A EALD F+ M +G++PN++TFV VL+AC H G V+EG H+F
Sbjct: 1419 VKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFN 1478
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
MK+ Y IEP HYGCMVDL GRAG L EA +++ M MK + V+WG L+GAC NV
Sbjct: 1479 AMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNV 1538
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+GE A+ L EL+P + G YV+LSN+YA G W +VER+R +MK+R L K P +SL
Sbjct: 1539 DLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQLVKPPGFSL 1595
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 61/382 (15%)
Query: 58 LSKCTNLLQLNQIYAHIIRT----------HMLHSYSA------------------AFHW 89
L C N L QI+A IIR+ ++H YS F W
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTW 93
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N IIR T ++AL +Y M G+ D +T P V+KA ++++G+ +H ++
Sbjct: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153
Query: 150 LGLESNEFCESGFISLYSK-------------------------------AGDFEKARKV 178
G + F ++ I Y K GD ++AR++
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE P + + SW A+I G ++ + +EA+++F ++ P++ TMVS+ AC +G L
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +H Y +K+ + + +LIDMY KCG + A +VF + + ++ +W SMI
Sbjct: 274 TLGRGIHDYA--IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
+GL EAL+ F M ++P+ +TF+GVL ACVH V+EG +F M Y I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 359 PRFAHYGCMVDLLGRAGLLEEA 380
P HY CM +L R+ L+EA
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 163/331 (49%), Gaps = 13/331 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I R +AL + + + G++P + P +K+ L L GR H A
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G E++ F S I +YSK G + AR +FDE P R + SW ++I G Q+ +A A+
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229
Query: 209 MFIGLKKCGFEPDD--------VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+F + E +D V MVSV SAC + + VH +V VK
Sbjct: 1230 LFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV--VKKGFDGSIG 1287
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RES 319
+ N+L+D Y KCG+ ++ KVF +++ + SW SMI YA +GL+ EAL+ FH M R
Sbjct: 1288 VGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHV 1347
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+R N VT VL AC H G ++ GK + + + +E ++D+ + G +E
Sbjct: 1348 GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-DLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
A+ + M K NV W ++ G K
Sbjct: 1407 AKKTFDRMKEK-NVKSWTAMVAGYGMHGRAK 1436
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 36/283 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H+ +R GL +++ I LYS G A +F + +WN II + +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +++A+ ++ + G D T V AC + ++L VH + +K D
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL--IKYGFSGDVF 161
Query: 261 MLNSLIDMYGKCGRMDLAYKVF----------W---------------------EIDQPN 289
+ N+LID Y KCG A KVF W EI N
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SWT+MI GY N EAL+ F M+ I PN T V ++ AC G + G+ +
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 350 -MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+KN +I ++D+ + G +++A + E MP K+
Sbjct: 282 YAIKNCIEIGVYLG--TALIDMYSKCGSIKDAIEVFETMPRKS 322
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
V + L C +L + +I+ I +++ W +I Y R + P++AL+++ M
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSKNVVS-------WTAMINGYIRNQQPEEALELFKRMQ 249
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ P+ YT+ ++KA ++ L +GR +H A++ +E + + I +YSK G +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
A +VF+ P + L +WN++I L G +EA+++F +++ +PD +T + V AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
SWN++IA L++ G + EA+ F L+K G P + +C +L DL H+
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
F ++D + ++LIDMY KCG++ A +F EI NV SWTSMI GY N A+
Sbjct: 1169 FVFGF--ETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADN 1226
Query: 309 ALDCFHYMRE--------SGIRPNHVTFVGVLSAC--VHGGKVQEGKHFFEMMKNV---- 354
AL F E + + + V V VLSAC V G + EG H F + K
Sbjct: 1227 ALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSI 1286
Query: 355 ------------------------YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM--- 387
+ E + M+ + ++GL EA + GM
Sbjct: 1287 GVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH 1346
Query: 388 -PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE-PWSDGAYVVLSNIYASRGLWEE 445
++ N V ++ AC G ++ G+ + + +++ ++ + ++Y G E
Sbjct: 1347 VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 446 VERIRAVMKHRNL 458
++ MK +N+
Sbjct: 1407 AKKTFDRMKEKNV 1419
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+LA + +D+ NV SW S+I A G + EAL F +R+ G+ P +F + +C
Sbjct: 1093 NLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSC 1152
Query: 336 -----VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+ G++ + F V+ E ++D+ + G L++ARA+ + +P++
Sbjct: 1153 SALCDLVSGRMSHQQAF------VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR 1206
Query: 391 ANVVIWGCLM 400
NVV W ++
Sbjct: 1207 -NVVSWTSMI 1215
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I +++ E ++A ++ M G+ + TL VLK+ L A + RQ+H+L++
Sbjct: 281 WNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSL 340
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E + + + I Y K G E A +VF+E+P L + +++ +QDG+ +EA+
Sbjct: 341 KSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALR 400
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+++ ++ G +PD S+ +AC SL E QVH ++ +K SD NSL++M
Sbjct: 401 LYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHI--LKFGFMSDIFAGNSLVNM 458
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A F I + SW++MI G A +G EAL F M + G+ PNH+T
Sbjct: 459 YAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITL 518
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL AC H G V E KH+F MK ++ IEP HY CM+DLLGRAG LE A +V MP
Sbjct: 519 VSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMP 578
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+AN ++WG L+GA N+ +GE A+ L LEP G +V+L+NIYAS G+W++V R
Sbjct: 579 FQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVAR 638
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K P S
Sbjct: 639 VRRLMKDGKVKKEPGMS 655
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II E +AL++ M+++G+ P+ +TL LKA + E+GRQLHS +
Sbjct: 180 WNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI 239
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ + S+ F G I +YSK + AR VF PER + +WNA+I+G SQ+ +EA
Sbjct: 240 KMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAAS 299
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G + T+ +V + +L + Q+H +KS + D ++NSLID
Sbjct: 300 LFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIH--ALSLKSGFEFDNYVVNSLIDT 357
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ A +VF E ++ +TS++ YA +G EAL + M++ GI+P+
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L+AC ++GK + + FA +V++ + G +E+A +P
Sbjct: 418 SSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAG-NSLVNMYAKCGSIEDASCAFSRIP 476
Query: 389 MKANVVIWGCLMGACEKFG 407
++ +V W ++G + G
Sbjct: 477 VRG-IVSWSAMIGGLAQHG 494
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 4/289 (1%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M G+ + + P VLKA L +G+Q+H + V G +S+EF + + LY+K G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
F AR +FD P+R + SWNA+ + EA+ +F + G P++ ++ S+ +
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C L D ++H Y+ +K SD N+L+DMY K G ++ A VF EI +P++
Sbjct: 121 CTGLEDSVQGRKIHGYL--IKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW ++I G + + AL+ M +SG+ PN T L AC + G+ +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ F G ++D+ + +++AR + + MP + +++ W ++
Sbjct: 239 IKMDMGSDSFLGVG-LIDMYSKCNSMDDARLVFKLMPER-DMIAWNAVI 285
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 153/331 (46%), Gaps = 26/331 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + Y + +A+ ++ M +G+ P+ ++L ++ L GR++H +
Sbjct: 79 WNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLI 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG +S+ F + + +Y+K G E A VFDE + + SWNAIIAG A++
Sbjct: 139 KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALE 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + K G P+ T+ S AC + EL Q+H + +K SD+ + LIDM
Sbjct: 199 LLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL--IKMDMGSDSFLGVGLIDM 256
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC MD A VF + + ++ +W ++I G++ N EA F M GI N T
Sbjct: 257 YSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTL 316
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
VL + +H ++ G F + N ++D G+ G +
Sbjct: 317 STVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVN------------SLIDTYGKCGHV 364
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
E+A + E P+ ++V++ L+ A + G
Sbjct: 365 EDATRVFEESPI-VDLVLFTSLVTAYAQDGQ 394
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 222/413 (53%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +AL +++ M AG PD TL V+ A L A GRQ+H+ V
Sbjct: 220 WNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMV 279
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------------ 189
+ L + + + +Y+K G +AR +FD P R + S
Sbjct: 280 KCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQ 339
Query: 190 -------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
WN +IA +Q+G +EAI +F+ LK+ P T +V +ACG++
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DL+L Q H +V F+ +SD + NSL+DMY K G +D KVF + + S
Sbjct: 400 DLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS 459
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVGYA NG A +AL F M S P+ VT +GVLSAC H G V EG+ +F M
Sbjct: 460 WNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMT 519
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ I P HY CMVDLLGRAG L+EA ++ MPM+ + V+W L+GAC NV++G
Sbjct: 520 EDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELG 579
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EW A L EL+P + G YV+LSN+YA G W EV R+R MK R ++K P S
Sbjct: 580 EWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCS 632
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 149/327 (45%), Gaps = 38/327 (11%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ Y+ L A G Q+H L R + S + +Y+K E AR+VF
Sbjct: 150 NAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVF 209
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D PER + SWN++I Q+G EA+ +F+ + GF PD+VT+ SV SAC L
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADR 269
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR------------------------- 274
QVH ++ + + + D ++ N+L+DMY KCGR
Sbjct: 270 EGRQVHAHMVKC-DRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTG 328
Query: 275 ------MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
++ A VF ++ + NV +W +I YA NG EA+ F ++ I P H T+
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 329 VGVLSACVHGGKVQEGKH-FFEMMKNVYQIE--PRFAHY--GCMVDLLGRAGLLEEARAM 383
VL+AC + +Q G+ ++K ++ + P + +VD+ + G +++ +
Sbjct: 389 GNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVK 410
E M + NV W ++ + G K
Sbjct: 449 FERMAARDNVS-WNAMIVGYAQNGRAK 474
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR--AKEAIDMFIG 212
N F + +S Y++ G ++AR +F+ P+ S+NA++A L++ GR A +A+
Sbjct: 82 NTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAA 141
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ F + + S SAC + D QVH V +S D + ++L+DMY KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLV--ARSPHADDVHIRSALVDMYAKC 199
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
R + A +VF + + NV SW S+I Y NG EAL F M +G P+ VT V+
Sbjct: 200 ERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVM 259
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC +EG+ M ++ +VD+ + G EAR + + MP ++
Sbjct: 260 SACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSI 319
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
V L G K NV+ + V + E A+ VL YA G EE R+
Sbjct: 320 VSETSILTGYA-KSANVEDAQVVFSQMVEKNVI---AWNVLIAAYAQNGEEEEAIRLFVQ 375
Query: 453 MKHRNL 458
+K ++
Sbjct: 376 LKRDSI 381
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 50 PAKIVATQLSKCTNLLQLNQIY-AHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI 108
P++ + ++ S T + + A ++ + M+ A WN +I Y + ++A+ +
Sbjct: 315 PSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIA--WNVLIAAYAQNGEEEEAIRL 372
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR------LGLESNEFCESGF 162
++ + R + P YT VL A + L++G+Q H ++ G ES+ F +
Sbjct: 373 FVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSL 432
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y K G + KVF+ R SWNA+I G +Q+GRAK+A+ +F + PD
Sbjct: 433 VDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDS 492
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN---SLIDMYGKCGRMDLAY 279
VTM+ V SACG G L + +Y F ++ T + ++D+ G+ G + A
Sbjct: 493 VTMIGVLSACGHSG---LVDEGRRY-FHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAE 548
Query: 280 KVFWEID-QPNVSSWTSMI 297
++ ++ +P+ W S++
Sbjct: 549 ELINDMPMEPDSVLWASLL 567
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 41/195 (21%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+KS +T +LN+L+ Y + GR+ A +VF EI N S+ +++ YA G +EA
Sbjct: 44 LKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSAYARLGRPDEAR 103
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACV-HG-GKVQEGKHFFEMM----------------- 351
F + + P+ ++ V++A HG G + F M
Sbjct: 104 ALFEAIPD----PDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAYSFASALS 159
Query: 352 -----------KNVYQIEPRFAH------YGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
+ V+ + R H +VD+ + E+AR + + MP + NVV
Sbjct: 160 ACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDAMPER-NVV 218
Query: 395 IWGCLMGACEKFGNV 409
W L+ E+ G V
Sbjct: 219 SWNSLITCYEQNGPV 233
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 226/378 (59%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R + +A+ ++ M + GV + T+ VLKA+ ++ + GR +H L +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G ++ + F S + +Y K ++ A+KVFDE P R + +W A+IAG Q + +
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGM 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K P++ T+ SV SAC +G L +VH Y+ +K+ + +T +LID
Sbjct: 292 LVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM--IKNSIEINTTAGTTLID 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG ++ A VF + + NV +WT+MI G+AA+G A +A D F+ M S + PN VT
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ VLSAC HGG V+EG+ F MK + +EP+ HY CMVDL GR GLLEEA+A++E M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ V+WG L G+C + ++G++ A + +L+P G Y +L+N+Y+ W+EV
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R MK + + K P +S
Sbjct: 530 RVRKQMKDQQVVKSPGFS 547
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 186/373 (49%), Gaps = 16/373 (4%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR--QLHS 145
H++ I L RL + Y M R GV+P +T P +LKA +F L Q H+
Sbjct: 76 HFSGGITLNRRL-----SFLAYRHMRRNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHA 127
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ GL+S+ F + IS YS +G F+ A ++FD ++ + +W A+I G ++G A E
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F+ +KK G +++T+VSV A G + D+ VH + + K D + +SL
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET-GRVKCDVFIGSSL 246
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMYGKC D A KVF E+ NV +WT++I GY + ++ + F M +S + PN
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T VLSAC H G + G+ M+KN IE ++DL + G LEEA +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKN--SIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
E + K NV W ++ G + + L ++ ++ + + A GL
Sbjct: 365 ERLHEK-NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 444 EEVERIRAVMKHR 456
EE R+ MK R
Sbjct: 424 EEGRRLFLSMKGR 436
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 234/428 (54%), Gaps = 44/428 (10%)
Query: 78 HMLHSYSAAFHWNNIIRLYTR--LEAP--KKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
H+ H +F WNN+IR TR ++ P AL +Y+ M VLPD +T P +L++
Sbjct: 16 HLSHPNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQS--- 72
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+ GRQLH+ + LGL ++ F ++ I++YS G AR+ FDE + L SWNAI
Sbjct: 73 INTPHRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAI 132
Query: 194 IAGLSQDGR---AKEAID------------MFIGLKKCG-------------------FE 219
I ++ G A++ D M G CG
Sbjct: 133 IHANAKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLR 192
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P++ TM SV SAC LG L+ VH Y+ K+ K D ++ SLIDMY KCG ++ A
Sbjct: 193 PNEFTMSSVLSACARLGALQHGKWVHAYI--DKTGMKIDVVLGTSLIDMYAKCGSIERAK 250
Query: 280 KVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
+F + + +V +W++MI ++ +GL+ E L+ F M G+RPN VTFV VL ACVHG
Sbjct: 251 CIFDNLGPEKDVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHG 310
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G V EG +F+ M N Y + P HYGCMVDL RAG +E+A +V+ MPM+ +V+IWG
Sbjct: 311 GLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGA 370
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+ G+V+ E L EL+P + AYV+LSN+YA G W EV +R +M+ R +
Sbjct: 371 LLNGARIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGI 430
Query: 459 AKIPAYSL 466
K+P SL
Sbjct: 431 KKLPGCSL 438
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 225/378 (59%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R ++ +A+ ++ M R+GV + T+ VLKA+ + + GR +H +
Sbjct: 172 WTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYL 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G + + F S + +Y K G ++ A+KVFDE P R + +W A+IAG Q ++ +
Sbjct: 232 EAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGM 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K P++ T+ SV SAC +G L +VH YV +K+ + +T + +LID
Sbjct: 292 FVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYV--IKNSIEINTTVGTTLID 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG ++ A VF + + NV +WT+MI G+AA+G A A+D FH M S + PN VT
Sbjct: 350 FYAKCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ VLSAC HGG V+EG+ F MK + +EP+ HY CMVDL GR GLLEEA+A++E M
Sbjct: 410 FIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ +WG L G+C + ++G++ A + +L+P G Y +L+N+Y+ W++V
Sbjct: 470 PMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R MK + + K P S
Sbjct: 530 RVRKQMKDQQVVKSPGCS 547
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 176/361 (48%), Gaps = 29/361 (8%)
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR--QLHSLAVRLGLESNEFCESGFISLY 166
Y M R GV+P +T P +LKA +F L Q H+ ++ G +S+ F + IS Y
Sbjct: 92 YRQMRRNGVVPSRHTFPPLLKA---VFKLRDANPFQFHAHILKFGFDSDLFVRNSLISGY 148
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
S G FE +VFD ++ + SW A+I G ++ + EA+ F+ +K+ G +++T+V
Sbjct: 149 SNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVV 208
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV A D+ +H + + + + D + +SL+DMYGKCG D A KVF E+
Sbjct: 209 SVLKATRKAEDVRFGRSIHGFYLEA-GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMP 267
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
NV +WT++I GY + + F M +S + PN T VLSAC H G + G+
Sbjct: 268 SRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRR 327
Query: 347 FF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW--------- 396
++KN +I ++D + G LEEA + E + K NV W
Sbjct: 328 VHCYVIKNSIEINTTVG--TTLIDFYAKCGCLEEAILVFERLREK-NVYTWTAMINGFAA 384
Query: 397 -GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKH 455
G +GA + F + ++ H+ E ++V+ + A GL EE R+ MK
Sbjct: 385 HGYAIGAVDLFHTM-----LSSHVSPNEV----TFIVVLSACAHGGLVEEGRRLFLSMKE 435
Query: 456 R 456
R
Sbjct: 436 R 436
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 217/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y ++ P A+D++ + + + PD T+ V+ A L L+ G +H L V
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENP-ERKLGSWNAIIAGLSQDGRAKEAI 207
+LG ES+ ++ I +Y+K G A +F++ + +WN IIA Q+G AKEAI
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F ++ F P+ VT VSV A L + H + Q+ S+TL+ NSLID
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL--SNTLVGNSLID 676
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG++D + K+F E+D + SW +M+ GYA +G + A+ F M+ES ++ + V+
Sbjct: 677 MYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VLSAC H G V+EG+ F M + Y I+P HY CMVDLLGRAGL +E ++ M
Sbjct: 737 FVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ + +WG L+G+C NVK+GE HL +LEP + +VVLS+IYA G W +
Sbjct: 797 PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAG 856
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ R+ M L K P S
Sbjct: 857 KARSKMNDLGLKKTPGCS 874
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 211/423 (49%), Gaps = 54/423 (12%)
Query: 25 LCKTHTFRKHVT--ISAASSFLDTHEDPAKIVATQ---------LSKCTNLLQLNQIYAH 73
+C H R+ T +AAS F P+ +T LS C +L L QI+A
Sbjct: 1 MCIKHQLRRSFTSIATAASEF------PSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQ 54
Query: 74 IIR---------THMLHSYSAAFH-------------------WNNIIRLYTRLEAPKKA 105
II TH+++ YS FH WN++IR YTR + +A
Sbjct: 55 IIVSGFKHHHSITHLINLYSL-FHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEA 113
Query: 106 LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
L++Y M G+ PD YT VLKA L+ G H R GLE + F +G + +
Sbjct: 114 LEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDM 173
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
YSK GD ++AR+VFD+ P+R + +WNA+IAGLSQ EA+D F ++ G EP V++
Sbjct: 174 YSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSL 233
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE- 284
+++ L ++EL +H YVF ++ + + N LID+Y KCG +D+A +VF +
Sbjct: 234 LNLFPGICKLSNIELCRSIHGYVF----RRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM 289
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+DQ +V SW +M+ GYA NG E L+ F M+ +R N V+ V A +++G
Sbjct: 290 VDQDDV-SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
K +I+ ++ + + G E+A+ + G+ + ++V W ++ A
Sbjct: 349 KEIHGCALQ-QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGR-DLVAWSAIIAALV 406
Query: 405 KFG 407
+ G
Sbjct: 407 QTG 409
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 172/364 (47%), Gaps = 8/364 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ II + P++AL ++ M + P+ TL +L A L L++G+ +H V
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV 457
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++S+ + +S+Y+K G F A F+ R + +WN++I G +Q G AID
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAID 517
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L+ PD TMV V AC L DL+ +H + VK +SD + N+LIDM
Sbjct: 518 MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDM 575
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG + A +F + D + +W +I Y NG A EA+ FH MR PN VT
Sbjct: 576 YAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VL A + +EG F + + + ++D+ + G L+ + + M
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLDYSEKLFNEM 694
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR--GLWEE 445
K + V W ++ G+ + +QE + D V S + A R GL EE
Sbjct: 695 DHK-DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV-SVLSACRHAGLVEE 752
Query: 446 VERI 449
+I
Sbjct: 753 GRKI 756
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 188/410 (45%), Gaps = 27/410 (6%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
+L+L PGI K S+ L R + FR+ + + ++ +D + SK
Sbjct: 233 LLNLFPGIC------KLSNIELCRSIHGYVFRRDFSSAVSNGLIDLY-----------SK 275
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C ++ +++ ++ + W ++ Y + L+++ M V +
Sbjct: 276 CGDVDVARRVFDQMVDQDDVS-------WGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
+ A+ + LE G+++H A++ ++S+ + + +Y+K G+ EKA+++F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
R L +W+AIIA L Q G +EA+ +F ++ +P+ VT++S+ AC L L+L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+H F VK+ SD +L+ MY KCG A F + ++ +W S+I GY
Sbjct: 449 GKSIH--CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
A G A+D F+ +R S I P+ T VGV+ AC + +G ++ + E
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESD 565
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G L A + + V W ++ A + G+ K
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/421 (36%), Positives = 233/421 (55%), Gaps = 42/421 (9%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAG---------VLPDCYTLPIVLKASCQLFA 136
A+ +N +IR T +D Y M R +LPD +T P V+KA +L
Sbjct: 51 AYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLGL 110
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKA--------------------------- 169
+G+Q+H+ + G +S+ E+ I +Y+K
Sbjct: 111 HNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISG 170
Query: 170 ----GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
G +AR +FDE P R + SW AII+G ++ G +A+D+F ++ G EPD+ ++
Sbjct: 171 HVRLGQMRRARALFDEMPNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEASI 230
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+SV AC LG LE +H +F ++ T + N+LI+MY KCG +D A ++F ++
Sbjct: 231 ISVLPACAKLGALETGKWIH--MFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQM 288
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+V SW++MI G A +G EA+ F M+++ I+PN +TFVG+LSAC H G +EG
Sbjct: 289 RGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAGFWEEGL 348
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+F+ MK + IEP HYG +VDLLGRAG L +A +VE MPMK + IWG L+ +C
Sbjct: 349 MYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDIVEKMPMKPDSKIWGSLLSSCRT 408
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
N+++ +HL+ELEP G YV+LSNIYA G W++V R+R +++ + + K P S
Sbjct: 409 HCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSKRMKKTPGCS 468
Query: 466 L 466
L
Sbjct: 469 L 469
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 227/416 (54%), Gaps = 7/416 (1%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + SKC NL ++ I + WN++I Y E KA++ Y
Sbjct: 192 ANTLIAAYSKCGNLCSAETLFDEINS-----GLRSVVSWNSMIAAYANFEKHVKAVNCYK 246
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M G PD T+ +L + Q AL G +HS V+LG +S+ + I +YSK G
Sbjct: 247 GMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCG 306
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
D AR +F+ ++ SW +I+ ++ G EA+ +F ++ G +PD VT++++ S
Sbjct: 307 DVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALIS 366
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
CG G LEL + Y + + K + ++ N+LIDMY KCG + A ++F+ + V
Sbjct: 367 GCGQTGALELGKWIDNY--SINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTV 424
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT+MI A NG +AL+ F M E G++PNH+TF+ VL AC HGG V+ G F M
Sbjct: 425 VSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNM 484
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M Y I P HY CMVDLLGR G L EA +++ MP + + IW L+ AC+ G ++
Sbjct: 485 MTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKME 544
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
MG++V++ L ELEP YV ++NIYAS +WE V IR MK+ + K P S+
Sbjct: 545 MGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSI 600
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 181/424 (42%), Gaps = 50/424 (11%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
T ++ +S F WN+ R + AL ++ M ++G+ P+ T P VLKA +L
Sbjct: 9 TPCINRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSH 68
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L + +H+ ++ +SN F ++ + +Y K G E A VF E P R + SWNA++ G
Sbjct: 69 LRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLG 128
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+Q G + ++ G PD VT++ + + + L V Y F ++
Sbjct: 129 FAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAV--YSFGIRIGVH 186
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFH 314
D + N+LI Y KCG + A +F EI+ +V SW SMI YA +A++C+
Sbjct: 187 MDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYK 246
Query: 315 YMRESGIRPNHVTFVGVLSACV------HG-----------------------------G 339
M + G P+ T + +LS+C+ HG G
Sbjct: 247 GMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCG 306
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIW 396
V + F M + + + M+ G + EA + M K ++V
Sbjct: 307 DVHSARFLFNGMSDKTCVS-----WTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTV 361
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMK 454
L+ C + G +++G+W+ + D V L ++YA G + + + + M
Sbjct: 362 LALISGCGQTGALELGKWIDNYSIN-NGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMA 420
Query: 455 HRNL 458
+R +
Sbjct: 421 NRTV 424
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 245/465 (52%), Gaps = 55/465 (11%)
Query: 42 SFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNI 92
SF + + A+IV + S+ +L N + + I L S F WN I
Sbjct: 39 SFRNLAKTHAQIVVSGFSQKNYIL--NHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQI 96
Query: 93 IRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL 152
I+ +TR + KK+++++ M+ AGV + +T +L A + G Q+H + G
Sbjct: 97 IKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGY 156
Query: 153 ESNEFCESGFISLYS------------------------------------KAGDFEKAR 176
SN + + I+LY+ + GDF+ AR
Sbjct: 157 WSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGAR 216
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
KVFDE PER + +W ++AG +Q+G+ K A+ +F +++ G E D V +V+ SAC LG
Sbjct: 217 KVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELG 276
Query: 237 DLELALQVHKYVFQVKSKQKSDTL--MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
DL L +H YV + + L + N+LI MY CG MDLAYK+F EI Q N SW+
Sbjct: 277 DLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWS 336
Query: 295 SMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
S+I G+A G EA+ F M SG +RP+ +TF+G L+AC H G + +G F+ M
Sbjct: 337 SIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRLFQSM 396
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ + P+ HYGCMVDLL RAGLL EA +++E MPMK N +WG L+ C N ++
Sbjct: 397 HKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHKNDEI 456
Query: 412 GEWVAKHLQ-ELEP--WSDGAYVVLSNIYASRGLWEEVERIRAVM 453
VAKHL E++P + G +++L+N+YA+ G W++ +R M
Sbjct: 457 VSHVAKHLSFEIDPNNQAAGYFMLLANVYAADGRWQDTATVRRNM 501
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 30/198 (15%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ SV +C S +L + H + QK+ +LN L+ +Y G + A KVF +
Sbjct: 30 IFSVLKSCVSFRNLA---KTHAQIVVSGFSQKN--YILNHLLSLYISFGSLGSAQKVFED 84
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I P+ + W +I G+ + + ++++ F M +G+ N T+ +LSACV +EG
Sbjct: 85 ITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG 144
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL--------------LEEARAMVEGMPMK 390
+ QI R G +L R L L+ A + + MP
Sbjct: 145 E----------QIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMP-D 193
Query: 391 ANVVIWGCLMGACEKFGN 408
+NVV W L+ + G+
Sbjct: 194 SNVVGWNSLLAGYVRRGD 211
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/384 (40%), Positives = 220/384 (57%), Gaps = 4/384 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN I+ Y + + ++++ M GV D TL V+ A ++ ++G+ +
Sbjct: 184 SGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWV 243
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
GL N + + +Y+K G+ KAR++FD R + +W+A+I+G +Q +
Sbjct: 244 AGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+EA+ +F ++ EP+DVTMVSV SAC LG LE VH YV + K+ S T +L
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYV---RRKRLSLTTILG 360
Query: 264 S-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+ L+D Y KCG +D A + F + N +WT++I G A NG EAL+ F MRE+GI
Sbjct: 361 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIE 420
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P VTF+GVL AC H V+EG+ F+ M Y I+PR HYGCMVDLLGRAGL++EA
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ MP++ N VIW L+ +C NV +GE K + L P G YV+LSNIYAS G
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W++ +R MK R + K P SL
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSL 564
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 6/314 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+N ++R + P+ AL ++I M + + D +T LK+ ++ AL++GR + +
Sbjct: 86 YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV+ GL ++ F S I +Y+ GD AR VFD E + WNAI+A ++G E
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++MF G+ + G D+VT+VSV +ACG +GD +L V +V + + ++ +L+
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDE--EGLARNPKLVTALM 263
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG + A ++F + +V +W++MI GY EAL F M+ + + PN V
Sbjct: 264 DMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T V VLSAC G ++ GK ++ ++ +VD + G +++A E
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRR-KRLSLTTILGTALVDFYAKCGCIDDAVEAFES 382
Query: 387 MPMKANVVIWGCLM 400
MP+K N W L+
Sbjct: 383 MPVK-NSWTWTALI 395
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 222/375 (59%), Gaps = 3/375 (0%)
Query: 87 FHWNNIIRLYTRLEA-PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +I Y + ++ALD++ M V+P+ +T LKA L AL IG Q+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
AV+LG S + IS+Y+++G + ARK FD E+ L S+N +I +++ ++E
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F ++ G T S+ S S+G + Q+H V +KS K + + N+L
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARV--IKSGLKLNQSVCNAL 518
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY +CG ++ A++VF +++ NV SWTS+I G+A +G A +AL+ FH M E G+RPN
Sbjct: 519 ISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNE 578
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VT++ VLSAC H G V EG F+ M + + PR HY C+VD+LGR+G L EA +
Sbjct: 579 VTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFIN 638
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP KA+ ++W +GAC GN+++G+ AK + E EP AY++LSN+YAS W+E
Sbjct: 639 SMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDE 698
Query: 446 VERIRAVMKHRNLAK 460
V IR MK + L K
Sbjct: 699 VSNIRKAMKEKXLIK 713
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 21/351 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ ++ + +AL ++ M G P+ Y +A + +G + +
Sbjct: 136 WSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVI 195
Query: 149 RLGLESNEFCES-GFISLYSKA-GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G ++ C G I ++ K GD A KVF++ PER +W +I L Q G A EA
Sbjct: 196 KTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEA 255
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F+ + G+EPD T+ V SAC ++ L L Q+H ++ D + LI
Sbjct: 256 IDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQA--IRHGLTLDRCVGCCLI 313
Query: 267 DMYGKC---GRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIR 322
+MY KC G M A K+F +I NV SWT+MI GY G EALD F M + +
Sbjct: 314 NMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVI 373
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----MVDLLGRAGLLE 378
PNH TF L AC + ++ G+ F + ++ F+ C ++ + R+G ++
Sbjct: 374 PNHFTFSSTLKACANLAALRIGEQVF-----THAVKLGFSSVNCVANSLISMYARSGRID 428
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+AR + + + N++ + ++ A K N E + E+E GA
Sbjct: 429 DARKAFD-ILFEKNLISYNTVIDAYAKNLN---SEEALELFNEIEDQGMGA 475
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 178/366 (48%), Gaps = 11/366 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W +I + +A+D+++ M +G PD +TL V+ A + L +G+QLHS
Sbjct: 236 AVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHS 295
Query: 146 LAVRLGLESNEFCESGFISLYSKA---GDFEKARKVFDENPERKLGSWNAIIAGLSQD-G 201
A+R GL + I++Y+K G ARK+FD+ + + SW A+I G Q G
Sbjct: 296 QAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGG 355
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+D+F G+ P+ T S AC +L L + QV + VK S +
Sbjct: 356 YDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQV--FTHAVKLGFSSVNCV 413
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
NSLI MY + GR+D A K F + + N+ S+ ++I YA N + EAL+ F+ + + G+
Sbjct: 414 ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ TF +LS G + +G+ ++K+ ++ + ++ + R G +E A
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCN--ALISMYSRCGNIESA 531
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYAS 439
+ E M + NV+ W ++ K G E K L+E ++ Y+ + + +
Sbjct: 532 FQVFEDMEDR-NVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSH 590
Query: 440 RGLWEE 445
GL E
Sbjct: 591 VGLVNE 596
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KA+ M G PD T + LK + + +IG +H + L+ + + I
Sbjct: 49 KAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLI 108
Query: 164 SLYSKAGDFEKARKVFD-ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
SLYSK G +EKA +F R L SW+A+++ + + A+ F+ + + G+ P++
Sbjct: 109 SLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNE 168
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL--AYK 280
+ T AC + + + + +V + Q SD + LIDM+ K GR DL A+K
Sbjct: 169 YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQ-SDVCVGCGLIDMFVK-GRGDLVSAFK 226
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
VF ++ + N +WT MI G A EA+D F M SG P+ T GV+SAC +
Sbjct: 227 VFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACAN 283
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 7/212 (3%)
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+GR +AI + G PD T C ++ VH+ + Q S + D
Sbjct: 43 NNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQ--SDLQLD 100
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMR 317
++ LNSLI +Y KCG+ + A +F + ++ SW++M+ +A N + AL F M
Sbjct: 101 SVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMI 160
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRA-G 375
E+G PN F AC V G F + ++ GC ++D+ + G
Sbjct: 161 ENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVC-VGCGLIDMFVKGRG 219
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
L A + E MP + N V W ++ +FG
Sbjct: 220 DLVSAFKVFEKMPER-NAVTWTLMITRLMQFG 250
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/406 (37%), Positives = 219/406 (53%), Gaps = 41/406 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR +++ E P K +++Y M A P+ +T ++ + L G Q+H V
Sbjct: 100 WNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVV 159
Query: 149 RLGLESNEFCESGFISLYS----------------------------------KAGDFEK 174
G +N F + ++LY+ + GD +
Sbjct: 160 ANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDG 219
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR++FDE PER + SW +IAG +Q GR K+A+ +F +++ G + D V +V+ SAC
Sbjct: 220 ARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAE 279
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTL--MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LGDL+L +H Y+ + L + NSLI MY CG +D AYKVF + Q + S
Sbjct: 280 LGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS 339
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGVLSACVHGGKVQEGKHFFE 349
WTSMI G+A G A EAL F +M+ G RP+ +TF+GVL AC H G V +G+HFFE
Sbjct: 340 WTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFE 399
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
M + I PR HYGCMVDLL RAG L+EA + E MPMK N +WG L+G C N
Sbjct: 400 CMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGCRIHKNA 459
Query: 410 KMGEWVAKHLQ-ELEPWSDGAY-VVLSNIYASRGLWEEVERIRAVM 453
++ VA+ L EL+P Y V+LSN+YA+ W++V +R M
Sbjct: 460 ELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKM 505
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 40/319 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLS 198
+Q+H+ + G F +S Y +G+ A KVF+ ENP + WN +I G S
Sbjct: 51 KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTV--WNQMIRGHS 108
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-------- 250
Q + ++++ + + EP++ T + C L QVH V
Sbjct: 109 QSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVVANGYCTNVF 168
Query: 251 ------------------VKSKQKSDTLM------LNSLIDMYGKCGRMDLAYKVFWEID 286
K+++ D ++ NSL+ Y +CG +D A ++F E+
Sbjct: 169 VRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMP 228
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ NV SWT+MI G A G +AL FH MR +G++ + V V LSAC G ++ G
Sbjct: 229 ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTW 288
Query: 347 FFEMMKNVYQI--EPRFAHY-GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
+ +P ++ + G++++A + GM ++ + W ++
Sbjct: 289 IHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTIS-WTSMITGF 347
Query: 404 EKFGNVKMGEWVAKHLQEL 422
K G+ + V + +Q L
Sbjct: 348 AKQGHAEEALGVFQWMQRL 366
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 91/223 (40%), Gaps = 39/223 (17%)
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
DD ++ C ++ L+ Q+H + QK+ +L L+ Y G + A+K
Sbjct: 33 DDGSLEETHITCDTIKKLK---QIHTQIIVNGFSQKN--FLLVKLLSFYITSGNLLNAHK 87
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
VF I+ P+ + W MI G++ + ++ ++ ++ M E+ PN T+ ++ C
Sbjct: 88 VFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXL 147
Query: 341 VQEGKHFF---------------EMMKNVYQI------------------EPRFAHYGCM 367
++EG+ + N+Y I + + +
Sbjct: 148 LREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSL 207
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ R G ++ AR + + MP + NVV W ++ C + G K
Sbjct: 208 LAGYVRCGDVDGARRIFDEMPER-NVVSWTTMIAGCAQIGRCK 249
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 235/453 (51%), Gaps = 45/453 (9%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTR----- 98
L+T A + T KC ++ + +I+ + + ++ W+ +I Y +
Sbjct: 289 LETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS-------WSAMIAGYAQSGYKD 341
Query: 99 LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLE----- 153
E+ + + M R GV P+ T +L+A ALE GRQ+H+ ++G E
Sbjct: 342 KESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSL 401
Query: 154 --------------------------SNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
N + F+S+Y K GD A KVF E P R +
Sbjct: 402 QTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNV 461
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN +IAG +Q+G + ++ +K GF+PD VT++++ ACG+L LE VH
Sbjct: 462 VSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAE 521
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
VK +SDT++ SLI MY KCG++ A VF ++ + +W +M+ GY +G
Sbjct: 522 A--VKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGL 579
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
EA+D F M + + PN +T V+SAC G VQEG+ F MM+ +++ PR HYGCM
Sbjct: 580 EAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCM 639
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDLLGRAG L+EA ++ MP + ++ +W L+GAC+ NV++ E A H+ ELEP
Sbjct: 640 VDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYA 699
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
Y+ LSNIYA G W++ ++R VM R L K
Sbjct: 700 SVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKK 732
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 172/333 (51%), Gaps = 11/333 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+++I Y P KA D + M+ A + P+ T +LKA LE GR++H++
Sbjct: 125 WSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVK 184
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G+E++ + I++YSK G+ A +VF + ER + SW AII +Q + EA +
Sbjct: 185 AMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFE 244
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + + G P+ VT VS+ ++C + L ++H ++ + ++D ++ N+LI M
Sbjct: 245 LYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE--RGLETDMIVANALITM 302
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA-----NEALDCFHYMRESGIRP 323
Y KC + A ++F + + +V SW++MI GYA +G +E MR G+ P
Sbjct: 303 YCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFP 362
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
N VTF+ +L AC G +++G+ E+ K ++++ + ++ + G + EA
Sbjct: 363 NKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQ 420
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ M K NVV W + K G++ E V
Sbjct: 421 VFSKMANK-NVVAWTSFLSMYIKCGDLSSAEKV 452
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 151/305 (49%), Gaps = 4/305 (1%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++A+ + + + G+L + T V++ + E G+ +H LG+E + + +
Sbjct: 38 REAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSL 97
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ YSK D A +VF R + +W+++IA + + +A D F + EP+
Sbjct: 98 INFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNR 157
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T +S+ AC + LE ++H V + ++D + +LI MY KCG + +A +VF
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAM--GMETDVAVATALITMYSKCGEISVACEVF 215
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
++ + NV SWT++I A + NEA + + M ++GI PN VTFV +L++C +
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G+ + +E ++ + + ++EAR + + M K +V+ W ++
Sbjct: 276 RGRRIHSHISE-RGLETDMIVANALITMYCKCNSVQEAREIFDRMS-KRDVISWSAMIAG 333
Query: 403 CEKFG 407
+ G
Sbjct: 334 YAQSG 338
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
L + GR +EAI + +K+ G + T V C E VHK + ++ +
Sbjct: 31 LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV--E 88
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + NSLI+ Y K + A +VF + +V +W+SMI YA N +A D F M
Sbjct: 89 IDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 148
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
++ I PN +TF+ +L AC + +++G+ ++K +E A ++ + + G
Sbjct: 149 TDANIEPNRITFLSILKACNNYSILEKGRKIHTIVK-AMGMETDVAVATALITMYSKCGE 207
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
+ A + M + NVV W ++ A
Sbjct: 208 ISVACEVFHKMTER-NVVSWTAIIQA 232
>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 245/439 (55%), Gaps = 34/439 (7%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH------------------SYSAAFH----------- 88
+SKC + +L QI A+ I++H S S A H
Sbjct: 38 ISKCNSERELMQIQAYAIKSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIV 97
Query: 89 -WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+N+I R Y+R P + ++++ + +LPD YT P +LKA ALE GRQLH L+
Sbjct: 98 IFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLS 157
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++LG++ N + I++Y++ D + AR VFD E + +NA+I G ++ R EA+
Sbjct: 158 MKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEAL 217
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LI 266
+F ++ +P+++T++SV S+C LG L+L +H+Y K + +N+ LI
Sbjct: 218 SLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYA---KKHGFCKYVKVNTALI 274
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG +D A +F + + +W++MIV YA +G A ++ F MR ++P+ +
Sbjct: 275 DMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI 334
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+G+L+AC H G V+EG+ +F M + + I P HYG MVDLLGRAG LE+A ++
Sbjct: 335 TFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDK 394
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P+ ++W L+ AC N+++ E V++ + EL+ G YV+LSN+YA WE V
Sbjct: 395 LPISPTPMLWRILLAACSSHNNLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAV 454
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ +R VMK R K+P S
Sbjct: 455 DSLRKVMKDRKAVKVPGCS 473
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 227/387 (58%), Gaps = 11/387 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPI-------VLKASCQLFALEIG 140
W ++I Y + E AL ++ F+ + D +P+ VL A ++ I
Sbjct: 2084 WTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGIT 2143
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H V+ G + + + + Y+K G ++KVFD E+ SWN++IA +Q
Sbjct: 2144 EGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQS 2203
Query: 201 GRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G + EA+++F G+ + G + VT+ +V AC G L +H V +K + +
Sbjct: 2204 GLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQV--IKMDLEYNV 2261
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ S+IDMY KCGR+++A K F + + NV SWT+M+ GY +G A EALD F+ M +
Sbjct: 2262 CVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRA 2321
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G++PN++TFV VL+AC H G V+EG H+F MK+ Y IEP HYGCMVDL GRAG L E
Sbjct: 2322 GVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNE 2381
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A +++ M MK + V+WG L+GAC NV +GE A+ L EL+P + G YV+LSN+YA
Sbjct: 2382 AYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYAD 2441
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
G W +VER+R +MK+R L K P +SL
Sbjct: 2442 AGRWADVERMRMLMKNRQLVKPPGFSL 2468
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 61/382 (15%)
Query: 58 LSKCTNLLQLNQIYAHIIRT----------HMLHSYSA------------------AFHW 89
L C N L QI+A IIR+ ++H YS F W
Sbjct: 34 LQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTW 93
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N IIR T ++AL +Y M G+ D +T P V+KA ++++G+ +H ++
Sbjct: 94 NLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153
Query: 150 LGLESNEFCESGFISLYSK-------------------------------AGDFEKARKV 178
G + F ++ I Y K GD ++AR++
Sbjct: 154 YGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRI 213
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE P + + SW A+I G ++ + +EA+++F ++ P++ TMVS+ AC +G L
Sbjct: 214 FDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGIL 273
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +H Y +K+ + + +LIDMY KCG + A +VF + + ++ +W SMI
Sbjct: 274 TLGRGIHDYA--IKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
+GL EAL+ F M ++P+ +TF+GVL ACVH V+EG +F M Y I
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIA 391
Query: 359 PRFAHYGCMVDLLGRAGLLEEA 380
P HY CM +L R+ L+EA
Sbjct: 392 PIPEHYECMTELYARSNNLDEA 413
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/336 (31%), Positives = 164/336 (48%), Gaps = 13/336 (3%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S WN++I R +AL + + + G++P + P +K+ L L GR
Sbjct: 1978 SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMS 2037
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H A G E++ F S I +YSK G + AR +FDE P R + SW ++I G Q+ +A
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 204 KEAIDMFIGLKKCGFEPDD--------VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
A+ +F + E +D V MVSV SAC + + VH +V VK
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV--VKKGF 2155
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ N+L+D Y KCG+ ++ KVF +++ + SW SMI YA +GL+ EAL+ FH
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 2215
Query: 316 M-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M R G+R N VT VL AC H G ++ GK + + + +E ++D+ +
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM-DLEYNVCVGTSIIDMYCKC 2274
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G +E A+ + M K NV W ++ G K
Sbjct: 2275 GRVEMAKKTFDRMKEK-NVKSWTAMVAGYGMHGRAK 2309
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H+ +R GL +++ I LYS G A +F + +WN II + +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +++A+ ++ + G D T V AC + ++L VH + +K D
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSL--IKYGFSGDVF 161
Query: 261 MLNSLIDMYGKCGRMDLAYKVF----------W---------------------EIDQPN 289
+ N+LID Y KCG A KVF W EI N
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKN 221
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SWT+MI GY N EAL+ F M+ I PN T V ++ AC G + G+ +
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281
Query: 350 M-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+KN +I ++D+ + G +++A + E MP K+ + W ++ +
Sbjct: 282 YAIKNCIEIGVYLG--TALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITS 332
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
V + L C +L + +I+ I +++ W +I Y R + P++AL+++ M
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSKNVVS-------WTAMINGYIRNQQPEEALELFKRMQ 249
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ P+ YT+ ++KA ++ L +GR +H A++ +E + + I +YSK G +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
A +VF+ P + L +WN++I L G +EA+++F +++ +PD +T + V AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCAC 368
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYG-KCGRMD---LAYKVFWEIDQPNVSSWTSMIVGYAA 302
YV V + D + NS+ ++G GR D LA + +D+ NV SW S+I A
Sbjct: 1935 YVCVVNFYECFDGITYNSI--LFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLAR 1992
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----VHGGKVQEGKHFFEMMKNVYQI 357
G + EAL F +R+ G+ P +F + +C + G++ + F V+
Sbjct: 1993 GGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF------VFGF 2046
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G L++ARA+ + +P++ NVV W ++
Sbjct: 2047 ETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMI 2088
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 136/304 (44%), Positives = 200/304 (65%), Gaps = 1/304 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ Y+K G+ EKARK+FDE P++ + +WNA+IAG KEA++MF ++ G PDD
Sbjct: 217 ITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDD 276
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VTM+S+ SA LGDLE+ ++H+ +F + S L+ N+LIDMY KCG + A +VF
Sbjct: 277 VTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLS-VLLSNALIDMYAKCGSIGNALEVF 335
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + + SSW S+I G A +G A E+++ F M ++PN +TFV VL AC H GKV+
Sbjct: 336 QGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVR 395
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG+ +F +MKNV++IEP HYGCMVD+LGRAGLL EA ++ M ++ N +IW L+GA
Sbjct: 396 EGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGA 455
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C G+V++G + L ++ G YV+LSNIYAS+G W+ V+++R +M + K
Sbjct: 456 CRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKV 515
Query: 463 AYSL 466
+SL
Sbjct: 516 GHSL 519
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 44/332 (13%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH + + S F WN +IR + P A+ +Y M GV PD +T VLKA
Sbjct: 65 YAHQLFAQI--SQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVLKA 122
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+L +++G +H ++ G +SN F + I ++ GD AR +FD + +R++ W
Sbjct: 123 CTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVVPW 182
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+A+ AG ++ G+ A +F D++ M
Sbjct: 183 SALTAGYARRGKLDVARQLF----------DEMPM------------------------- 207
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
D + N +I Y K G M+ A K+F E+ + +V +W +MI GY + L EAL
Sbjct: 208 ------KDLVSWNVMITAYAKHGEMEKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEAL 261
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F MR+ G RP+ VT + +LSA G ++ GK + ++ + ++D+
Sbjct: 262 EMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDM 321
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G + A + +GM K + W ++G
Sbjct: 322 YAKCGSIGNALEVFQGMR-KKDTSSWNSIIGG 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 36/264 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH-SLA 147
WN +I Y K+AL+++ M G PD T+ +L AS L LEIG+++H S+
Sbjct: 244 WNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIF 303
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + + I +Y+K G A +VF ++ SWN+II GL+ G A+E+I
Sbjct: 304 DMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESI 363
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + + +P+++T V+V AC G +V+ + LM N
Sbjct: 364 NLFQEMLRLKMKPNEITFVAVLVACSHAG-------------KVREGRMYFNLMKN---- 406
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+K+ +PN+ + M+ GL EA D M I PN +
Sbjct: 407 ----------VFKI-----EPNIKHYGCMVDILGRAGLLIEAFDFIDTME---IEPNAII 448
Query: 328 FVGVLSACVHGGKVQEGKHFFEMM 351
+ +L AC G V+ G+ E +
Sbjct: 449 WRTLLGACRVHGDVELGRRANEQL 472
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 215/378 (56%), Gaps = 8/378 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+ KALD I M R GV P+ YT VL+A L L RQLH +
Sbjct: 85 WTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSIL 141
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLES+ F S I YSK G+ A VF+E L WN+II G +Q+ E +
Sbjct: 142 KVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLH 201
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ +K+ F D T+ SV AC L LEL QVH +V K D ++ N+L+DM
Sbjct: 202 LYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL----KYDQDLILNNALLDM 257
Query: 269 YGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG ++ A +F + + +V SW++MI G A NG + +AL F M+ G +PN++T
Sbjct: 258 YCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYIT 317
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+GVL AC H G V +G ++F+ MK + I+P HYGC++DLLGRAG L+EA ++ M
Sbjct: 318 ILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEM 377
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
+ + V W L+GAC NV + + AK + +L+P G Y++LSNIYA+ WE+V
Sbjct: 378 NHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQKWEDVA 437
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R M+ R + K P S
Sbjct: 438 EVRRKMRTRGVKKDPGCS 455
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 8/296 (2%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R + D T ++K A++ R +H G E F + I++Y K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
++AR +FDE P+R + SW +I+ S +A+D I + + G P+ T SV A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C L +L Q+H + +V +SD + ++LID Y K G A VF E+ ++
Sbjct: 127 CDGLLNLR---QLHGSILKV--GLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLV 181
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
W S+I G+A N +E L + M+ + + T VL AC ++ G+ ++
Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGR---QVH 238
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+V + + ++D+ + G LE+A + M + +V+ W ++ + G
Sbjct: 239 VHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNG 294
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 246/444 (55%), Gaps = 40/444 (9%)
Query: 51 AKIVATQLS-KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKA---- 105
A +V + +S +C+ L + +A II+T L + +F +N+++ +Y++L+ P A
Sbjct: 10 ASLVESAVSTQCSRLGR--AAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLL 65
Query: 106 ---------------------------LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
L + M R + P+ +T P KAS L +
Sbjct: 66 SLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPL 125
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+G+Q+H+LAV+ G S+ F +YSKAG E+ARK+FDE PER + +WNA ++
Sbjct: 126 VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+GR +A+ FI +K G EP D + SV SAC L LE+ VH VK+ +
Sbjct: 186 LEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVH--TLAVKACVVGN 243
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ ++L+DMYGKCG ++ A + F E+ + N+ +W +MI GYA G A+ A+ F M
Sbjct: 244 IFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTC 303
Query: 319 SGIR--PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
R PN+VTFV VLSAC G V G FE M+ Y IEP HY C+VDLLGRAG+
Sbjct: 304 GSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGM 363
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
+E+A ++ MP++ V +WG L+GA + FG ++G+ A +L EL+P G +V+LSN+
Sbjct: 364 VEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNM 423
Query: 437 YASRGLWEEVERIRAVMKHRNLAK 460
+A+ G WEE +R MK + K
Sbjct: 424 FAAAGRWEEATLVRKEMKDVGIKK 447
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 224/409 (54%), Gaps = 44/409 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II+ +TR + KK+++++ M+ AGV + +T +L A + G Q+H +
Sbjct: 93 WNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVL 152
Query: 149 RLGLESNEFCESGFISLYS------------------------------------KAGDF 172
G SN + + I+LY+ + GDF
Sbjct: 153 VNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDF 212
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
+ ARKVFDE PER + +W ++AG +Q+G+ K A+ +F +++ G E D V +V+ SAC
Sbjct: 213 DGARKVFDEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSAC 272
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTL--MLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
LGDL L +H YV + + L + N+LI MY CG MDLAYKVF EI Q N
Sbjct: 273 AELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQRNT 332
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACVHGGKVQEGKHF 347
SW+S+I G+A G EA+ F M SG +RP+ +TF+G L+AC H G + +G
Sbjct: 333 VSWSSIITGFAKQGCGVEAIRIFQLMLCSGQNEVRPDEITFIGALTACSHAGLISDGIRL 392
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
F+ M + + P+ HYGCMVDLL RAGLL EA +++E MPMK N +WG L+ C
Sbjct: 393 FQSMHKTFGVIPQIEHYGCMVDLLSRAGLLTEALSLIESMPMKPNNAVWGALLSGCRLHK 452
Query: 408 NVKMGEWVAKHLQ-ELEP--WSDGAYVVLSNIYASRGLWEEVERIRAVM 453
N ++ VAKHL E+ P + G +++L+N+YA+ G W++ +R M
Sbjct: 453 NDEIVSHVAKHLSFEIHPNNQAAGYFMLLANVYAADGRWQDTATVRRNM 501
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 46/307 (14%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H+ V G + + +SLY G A+KVF++ WN II G ++
Sbjct: 45 KIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAPSTTVWNQIIKGHTRSK 104
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC----------------------------- 232
+K++I++F + G E + T + SAC
Sbjct: 105 TSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRT 164
Query: 233 ---------GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
G GD + L+ +Y+F S+ + NSL+ Y + G D A KVF
Sbjct: 165 NLINLYANGGDGGDFD--LKRARYLFD--EMPDSNVVGWNSLLAGYVRRGDFDGARKVFD 220
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
E+ + NV +WT M+ G+A NG AL F MR +G+ + V V LSAC G +
Sbjct: 221 EMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTL 280
Query: 344 GKHFFEMMKNVYQ---IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
GK ++ ++ + + ++ + G+++ A + E +P + N V W ++
Sbjct: 281 GKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMDLAYKVFEEIPQR-NTVSWSSII 339
Query: 401 GACEKFG 407
K G
Sbjct: 340 TGFAKQG 346
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ SV +C S +L ++H + QK+ +LN L+ +Y G + A KVF +
Sbjct: 30 IFSVLKSCVSFRNLA---KIHAQIVVSGFSQKN--YILNHLLSLYISFGSLGSAQKVFED 84
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I P+ + W +I G+ + + ++++ F M +G+ N T+ +LSACV +EG
Sbjct: 85 ITAPSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSACVRSRLFREG 144
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL--------------LEEARAMVEGMPMK 390
+ QI R G +L R L L+ AR + + MP
Sbjct: 145 E----------QIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMP-D 193
Query: 391 ANVVIWGCLMGACEKFGN 408
+NVV W L+ + G+
Sbjct: 194 SNVVGWNSLLAGYVRRGD 211
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 249/476 (52%), Gaps = 46/476 (9%)
Query: 20 PLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK----CTNLLQLNQIYAHII 75
PLL L + + + + I ++ L DP V T L + C + + A ++
Sbjct: 127 PLLKALSRVKSLVEGLEIHGLAAKLGFDSDP--FVQTGLVRMYAACGRIAE-----ARLM 179
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
M H W+ +I Y + AL ++ M V PD L VL A +
Sbjct: 180 FDKMFHR--DVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAG 237
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLY----------------------------- 166
L G+ +H + + + +S +++Y
Sbjct: 238 NLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVT 297
Query: 167 --SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
SK G E AR VF++ ++ L W+A+I+G ++ +EA+++F ++ G +PD VT
Sbjct: 298 GYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVT 357
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
M+SV +AC LG L+ A +H +F K+ + N+LI+MY KCG ++ A ++F +
Sbjct: 358 MLSVITACAHLGALDQAKWIH--LFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDK 415
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + NV SWT MI +A +G A AL FH M + I PN +TFVGVL AC H G V+EG
Sbjct: 416 MPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEG 475
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ F M N + I P+ HYGCMVDL GRA LL EA +VE MP+ NV+IWG LM AC
Sbjct: 476 RKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACR 535
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
G +++GE+ AK L EL+P DGA+V LSNIYA WE+V ++R +MKH+ ++K
Sbjct: 536 VHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISK 591
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 201/415 (48%), Gaps = 68/415 (16%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYS--------------------AAFHW------ 89
+ LS T+L L Q++A I+R+ + S S + F+
Sbjct: 28 SALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPET 87
Query: 90 ---NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
N +R +R E P+K L +Y M G+ D ++ P +LKA ++ +L G ++H L
Sbjct: 88 HLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGL 147
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A +LG +S+ F ++G + +Y+ G +AR +FD+ R + +W+ +I G Q G +A
Sbjct: 148 AAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDA 207
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +K EPD++ + +V SACG G+L +H ++ + + D + ++L+
Sbjct: 208 LLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIME--NNIVVDPHLQSALV 265
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSS-------------------------------WTS 295
MY CG MDLA +F ++ N+ + W++
Sbjct: 266 TMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSA 325
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKN 353
MI GYA + EAL+ F+ M+ GI+P+ VT + V++AC H G + + K H F + KN
Sbjct: 326 MISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLF-VDKN 384
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ ++++ + G LE AR + + MP K NV+ W C++ A G+
Sbjct: 385 GFG--GALPINNALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMISAFAMHGD 436
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 23/292 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y ++P++AL+++ M G+ PD T+ V+ A L AL+ + +H
Sbjct: 323 WSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVD 382
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + I +Y+K G E+AR++FD+ P + + SW +I+ + G A A+
Sbjct: 383 KNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALR 442
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ EP+ +T V V AC G +E ++ Y + + ++D+
Sbjct: 443 FFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIF-YSMINEHNITPKHVHYGCMVDL 501
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+G+ + A ++ + PNV W S++ +G L F R + P+H
Sbjct: 502 FGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG--EIELGEFAAKRLLELDPDH-- 557
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+G H F + N+Y R+ G + L+ G+ +E
Sbjct: 558 ---------------DGAHVF--LSNIYAKARRWEDVGQVRKLMKHKGISKE 592
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 219/378 (57%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + K+ L ++ M +G P+ TL VL A L L +G+ +H +
Sbjct: 197 WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGI 256
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG++ + + I+LY K G+ E AR +FD + L SWNA+IA Q+ A+
Sbjct: 257 KLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVK 316
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ + D +TMVSV SAC SLG L +H+ V + + + + N+LIDM
Sbjct: 317 LFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELV--KRKGLEINVSITNALIDM 374
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +DLA +VF + +V SWTSMI A++G +AL F M++ G++PN TF
Sbjct: 375 YAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTF 434
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V +AC H G V+EG+ FE M Y I P H CMVDLLGRAG L EA ++ MP
Sbjct: 435 AAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMP 494
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ +V +WG L+G+C N+++ E VA+ L L+P + YV++SNIYA G WE+ R
Sbjct: 495 VEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAAR 554
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R +M+ R L KIP +SL
Sbjct: 555 LRKLMEERELKKIPGHSL 572
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 172/322 (53%), Gaps = 4/322 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR Y ++AL +Y M AG+ PD YT P V+++ L AL G+++H
Sbjct: 94 FLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCN 153
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G +S+ F +S +++YS++G+ VF E R + SW A+IAG Q+ KE
Sbjct: 154 IVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEG 213
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + G +P+ VT+VSV AC L L L +H Y +K D + N+LI
Sbjct: 214 LGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGY--GIKLGVDPDVSLTNALI 271
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+YGKCG ++ A +F + N+ SW +MI Y N A+ F M+ + +++
Sbjct: 272 ALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYI 331
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T V V+SAC G + G+ E++K +E + ++D+ + G ++ AR + E
Sbjct: 332 TMVSVISACASLGALNTGRWMHELVKR-KGLEINVSITNALIDMYAKCGNIDLAREVFER 390
Query: 387 MPMKANVVIWGCLMGACEKFGN 408
+P ++ VV W ++GAC G+
Sbjct: 391 LPCRS-VVSWTSMIGACASHGH 411
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 142 QLHSLAVRLGLESNEFCESGFI-SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++H+L V G N + I + A + ARK+FD+ P+R + WN +I G +
Sbjct: 47 RIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADA 106
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +EA+ ++ + G PD+ T V +C L L +VH + VK SD
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI--VKHGFDSDVF 164
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +SL+ MY + G VF E+ N+ SWT++I GY N E L F M SG
Sbjct: 165 VQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSG 224
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY------QIEPRFAHYGCMVDLLGRA 374
+PN VT V VL AC G F + K ++ ++P + ++ L G+
Sbjct: 225 TQPNAVTLVSVLPACA-------GLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKC 277
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
G +E AR++ +GM ++ N+V W ++ A E+
Sbjct: 278 GNVETARSLFDGMVVQ-NLVSWNAMIAAYEQ 307
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 233/409 (56%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + E ++AL ++ M+ G++ D + VL A +L + G+ +H L V
Sbjct: 257 WSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVV 316
Query: 149 RLGLESNEFCESGFISLYS-------------------------------KAGDFEKARK 177
++G+E+ ++ I +YS K G+ EKAR
Sbjct: 317 KVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARA 376
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD P++ SW+A+I+G +Q R E + +F ++ G +PD+ +VSV SAC L
Sbjct: 377 LFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAA 436
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ +H Y+ K+ K + ++ +LI+MY K G ++ A +VF +++ VS+W ++I
Sbjct: 437 LDQGKWIHAYI--RKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALI 494
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NGL +++L F M+E G+ PN +TFV VL AC H G V EG F M ++I
Sbjct: 495 LGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKI 554
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P HYGCMVDLLGRAG+L+EA ++E MPM +V WG L+GAC+K+G+ + GE + +
Sbjct: 555 GPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGR 614
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL P DG V+LSNIYAS+G W +V +R +M+ + K P S+
Sbjct: 615 KLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSM 663
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 171/402 (42%), Gaps = 103/402 (25%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA-------------------------- 86
I+ T L KC N+ Q NQI + +I + AA
Sbjct: 28 ILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIE 87
Query: 87 ----FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GR 141
F N +++ Y + +P KA+ +Y FM + V D YT PI+ + SC + E G+
Sbjct: 88 NPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ-SCSIRLAEFDGK 146
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+ +++G +S+ + ++ I++Y+ G+ ARKVFD + + SWN+++AG G
Sbjct: 147 CIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVG 206
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA D++ + P+ + S
Sbjct: 207 NVEEAKDVYDRM------PERNVIAS---------------------------------- 226
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
NS+I ++GK G ++ A K+F E+ Q ++ SW+++I Y N + EAL F M +GI
Sbjct: 227 -NSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGI 285
Query: 322 RPNHVTFVGVLSAC-----------VHGGKVQEG-----------KHFFEMMKNVYQIEP 359
+ V + VLSAC VHG V+ G H + + V +
Sbjct: 286 MVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQK 345
Query: 360 RFAHYGC--------MVDLLGRAGLLEEARAMVEGMPMKANV 393
F+ C M+ + G +E+ARA+ + MP K NV
Sbjct: 346 LFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNV 387
>gi|218199092|gb|EEC81519.1| hypothetical protein OsI_24907 [Oryza sativa Indica Group]
Length = 460
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 224/396 (56%), Gaps = 9/396 (2%)
Query: 71 YAHIIRTHML-HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK 129
YA + + +L H F N ++R+ P+ AL+++ R LPD +T P +L+
Sbjct: 68 YAVAVLSRLLPHGPLDPFPLNTVLRIAAGSPRPRVALELH---RRRLALPDTHTYPPLLQ 124
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKL 187
A +L AL G LH+ A + G + F ++ + LY G FE A KVFDE P R L
Sbjct: 125 ACARLLALREGECLHAEAAKNGFVTLVFVQNSLVHLYGACGLFESAHKVFDEMPVRGRNL 184
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN+++ + +GR E + +F + F PD T+VSV +AC G L L +VH Y
Sbjct: 185 VSWNSMLNSFAANGRPNEVLTVFWEMLGVDFAPDGFTIVSVLTACAEFGALALGRRVHVY 244
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLA 306
V +V + S + N+LID+Y KCG ++ A ++F E+ V SWTS+IVG AANG
Sbjct: 245 VEKVGLVENSH--VSNALIDLYAKCGSVNDARRIFEEMGLGRTVVSWTSLIVGLAANGFG 302
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
EAL+ F M + P +T VGVL AC H G V +G +F+ MK Y I PR H GC
Sbjct: 303 KEALELFSLMEREKLVPTEITMVGVLYACSHCGLVDDGFRYFDRMKEDYGISPRIEHLGC 362
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
MVDLLGRAG +EEA + MP++ N V+W L+G+C +++G+ + L EL+P
Sbjct: 363 MVDLLGRAGRVEEAYDYIITMPLEPNAVVWRTLLGSCAMHKKLELGKVAWERLVELDPGH 422
Query: 427 DGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
G YV+LSN+YA+ G+W +V +R M + K P
Sbjct: 423 SGDYVLLSNLYAAVGMWADVHVLRKTMVKDRVRKNP 458
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 156/414 (37%), Positives = 235/414 (56%), Gaps = 35/414 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + +AL +Y M R+G+ + + ++ A +L A+ G QLH + V
Sbjct: 501 WGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVV 560
Query: 149 RLGLESNEFCESGFISLYSKAG-------DFE------------------------KARK 177
+ G + F ++ I Y+ G FE +ARK
Sbjct: 561 KKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARK 620
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ PER + SW+ +I+G +Q +++ A+++F + G +P++VTMVSV SA +LG
Sbjct: 621 IFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGT 680
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTS 295
L+ H+Y+ +S +D L +LIDMY KCG ++ A + F +I +VS W +
Sbjct: 681 LKEGRWAHEYICN-ESIPLNDNLRA-ALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNA 738
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I G A++G A+ LD F M+ I+PN +TF+GVLSAC H G V+ G+ F +MK+ Y
Sbjct: 739 IICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAY 798
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+EP HYGCMVDLLGRAGLLEEA M+ MPMKA++VIWG L+ AC G+V +GE
Sbjct: 799 NVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERA 858
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATR 469
A+ L L P G V+LSNIYA G WE+V +R ++++ + ++P S R
Sbjct: 859 AESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGVIR 912
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 174/420 (41%), Gaps = 69/420 (16%)
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
E ++AL+++ M GV+P+ TL V+ A + R +H++A++L +E
Sbjct: 380 ECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVS 439
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG------------------ 201
+ + Y +AR++FD PE L SWN ++ G ++ G
Sbjct: 440 TNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVI 499
Query: 202 -------------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
R EA+ M+ + + G +++ +V++ SACG L + Q+H V
Sbjct: 500 SWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMV 559
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDL------------------------------- 277
VK + ++I Y CG MDL
Sbjct: 560 --VKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQ 617
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A K+F ++ + +V SW++MI GYA + AL+ FH M SGI+PN VT V V SA
Sbjct: 618 ARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIAT 677
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA-NVVIW 396
G ++EG+ E + N I ++D+ + G + A + K +V W
Sbjct: 678 LGTLKEGRWAHEYICN-ESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPW 736
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQ--ELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
++ G+ M V +Q ++P VLS + GL E RI +MK
Sbjct: 737 NAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHA-GLVEPGRRIFRIMK 795
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 60/272 (22%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSK------------------------------- 168
GRQLHSL ++LGL SN F ++ I++Y+K
Sbjct: 288 GRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAK 347
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
AG + ARK+FD P++ S+ +I GL Q+ +EA+++F ++ G P+D+T+V+V
Sbjct: 348 AGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNV 407
Query: 229 TSACGSLGDLELALQVHKYVFQV-----------------------------KSKQKSDT 259
AC G++ +H ++ + +
Sbjct: 408 IYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNL 467
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N +++ Y K G +D+A ++F + +V SW +MI GY +EAL + M S
Sbjct: 468 VSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRS 527
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
G+ N + V ++SAC + +G M+
Sbjct: 528 GLALNEILVVNLVSACGRLNAIGDGWQLHGMV 559
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 27/235 (11%)
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
S GR ++ + +GL F + +++++ + GS+ D +L +
Sbjct: 285 SSQGRQLHSLVLKLGLHSNTFIQN--SLINMYAKRGSIKDAQLLFDACPTL--------- 333
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + N ++ Y K G++D A K+F + S+T+MI+G N EAL+ F MR
Sbjct: 334 NPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMR 393
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-----MKNVYQIEPRFAHYGCMVDLLG 372
G+ PN +T V V+ AC H G++ + + ++ + + C+ +G
Sbjct: 394 SDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVG 453
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
EAR + + MP + N+V W ++ K G V M A+ L E P D
Sbjct: 454 ------EARRLFDRMP-EVNLVSWNVMLNGYAKAGLVDM----ARELFERVPDKD 497
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 255/485 (52%), Gaps = 46/485 (9%)
Query: 19 HPLLHRLCKTHTFRK----HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHI 74
HP + L TF++ H + + D H + A LS L NQI
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYTLPIVLKASC 132
+ + F N++IR + + P+K+ D Y I S + PD YT+ +++A
Sbjct: 67 EKPTL-------FALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT 119
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS------------------------- 167
L E G Q+H + +R G +++ ++G ISLY+
Sbjct: 120 GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTA 179
Query: 168 ------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ GD ARK+F+ PER +WNA+I+G +Q G ++EA+++F ++ G + +
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVN 239
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V M+SV SAC LG L+ H Y+ ++K K + +L+D+Y KCG M+ A +V
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYI--ERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
FW +++ NV +W+S + G A NG + L+ F M++ G+ PN VTFV VL C G V
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG+ F+ M+N + IEP+ HYGC+VDL RAG LE+A ++++ MPMK + +W L+
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A + N+++G +K + ELE + GAYV+LSNIYA W+ V +R MK + + K
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 462 PAYSL 466
P S+
Sbjct: 478 PGCSV 482
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 161/414 (38%), Positives = 234/414 (56%), Gaps = 37/414 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
AF W +I + R + +AL ++ M G D + V+ A + ++ G H
Sbjct: 234 AFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHG 293
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN----------------------- 182
L VR GL S ++ I +YS D AR++FD +
Sbjct: 294 LVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVED 353
Query: 183 --------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
P++ SW+A+IAG Q+ ++ EA+ +F ++ +PD+VT+VSV SAC +
Sbjct: 354 AKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTN 413
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L LE VH+Y+ Q Q + T++L SLIDMY KCG M+ A +VF +++ W
Sbjct: 414 LCALEQGKLVHEYIRQY---QYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCW 470
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
++IVG A NGL +LD F M SGI P+ +TF GVLSAC HGG V+EG+ FF++M+
Sbjct: 471 NAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKLMQ 530
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
N YQI P HYGCMVDLLGRAG + EA +++ MPM +V WG L+GAC K + ++G
Sbjct: 531 NKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGACWKHSDSEVG 590
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
E V K L +L+P DG +LSNIYAS G+W+ V+ +R MK +++AK+ S+
Sbjct: 591 ERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMK-QHVAKVAGCSV 643
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 149/405 (36%), Gaps = 77/405 (19%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH 88
H H A+ D + ++ T + LL Q H ++ L AF
Sbjct: 19 HLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLP--QPLHHSLQLFRLVRSPNAFT 76
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR R P +Y M A PD YT P++ A GRQ+HS AV
Sbjct: 77 CNTLIRAALRQGLPHLCFPLYASMPAA---PDTYTHPLLAAACAARGDAREGRQVHSHAV 133
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G N + + + +YS G AR+VFD P SWN I+A +DG ++A+
Sbjct: 134 KHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILATYVRDGDVEQAVG 193
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + ++S++ +
Sbjct: 194 VFARMP-----------------------------------------ERSAAAVSSMVAL 212
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ + G ++ A VF + + +WT+MI + N L EAL F MRE G +
Sbjct: 213 FARTGMVEEARGVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVM 272
Query: 329 VGVLSACVHGGKVQEGK----------------------HFFEMMKNVYQIEPRFA---- 362
V V++AC +Q G+ H + +V F
Sbjct: 273 VSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSES 332
Query: 363 ----HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
+ M+ + G +E+A+A+ MP K NV W ++ C
Sbjct: 333 LDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVS-WSAMIAGC 376
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 221/380 (58%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++IR Y ++P++A+ Y+ M G+ PD T PI+LKA + A GR++ +
Sbjct: 87 WNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAFNEGRKIQVDVM 146
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ N + ++ I Y AR++FDE R + SWNA+++ + ++
Sbjct: 147 KHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFG 206
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ GF+PD+ TMV + SAC LG+L VH V ++ + + +L+DM
Sbjct: 207 LFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQV--IEKGMVVNCRLGTALVDM 264
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + NV +W++MI+G A +G A EAL+ F M++S I PN+VTF
Sbjct: 265 YAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTF 324
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL AC H G V +G FF M+ V+ IEP HYG MVD+L RAG L+EA + MP
Sbjct: 325 LGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMP 384
Query: 389 MKANVVIWGCLMGACEKFG---NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
++A+ V+W L+ AC G N +G+ V K L ELEP G +V+++N+YA G W++
Sbjct: 385 VEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDK 444
Query: 446 VERIRAVMKHRNLAKIPAYS 465
+R MK L K+ S
Sbjct: 445 AANVRRTMKDTGLKKMAGES 464
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN ++ E + +++ M +G PD T+ I+L A +L L GR
Sbjct: 181 SYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGR 240
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+HS + G+ N + + +Y+K G +A VF ER + +W+A+I GL+Q G
Sbjct: 241 WVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHG 300
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
AKEA+++F +K+ P+ VT + V AC G L +++ ++ + +M
Sbjct: 301 FAKEALELFPKMKQSSISPNYVTFLGVLCACSHAG---LVDDGYRFFHDMEYVHGIEPMM 357
Query: 262 LN--SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANE 308
++ +++D+ + GR+ AY + + + W +++ +G+ +
Sbjct: 358 IHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDN 407
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
FC S S G+ AR + + + ++ SWN +I + +EAI ++ ++
Sbjct: 59 RFCAS------SPLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRS 112
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G PD +T + AC + ++ V +K + + N++I YG C R+
Sbjct: 113 LGISPDKLTFPILLKACAXISAFNEGRKIQVDV--MKHGLDCNVYVQNTMIHFYGSCKRI 170
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A ++F E+ V SW +++ N N++ F MR SG P+ T V +LSAC
Sbjct: 171 RDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSAC 230
Query: 336 VHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
G + G+ ++++ + R +VD+ + G + EA + M ++ NV
Sbjct: 231 SELGNLSFGRWVHSQVIEKGMVVNCRLG--TALVDMYAKCGAVCEASLVFHRM-LERNVW 287
Query: 395 IWGCLMGACEKFGNVK 410
W ++ + G K
Sbjct: 288 TWSAMILGLAQHGFAK 303
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
++ +VS C SL +L ++ K++FQ++ +L G ++ A +
Sbjct: 21 NLNLVSTKQQCLSLLNLCSSM---KHLFQIRGHGFIAGPLLRFCAS--SPLGNLNHARVL 75
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
++ VSSW +I YA EA+ + MR GI P+ +TF +L AC
Sbjct: 76 LSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAXISAF 135
Query: 342 QEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
EG+ ++MK + ++ M+ G + +AR M + M + VV W ++
Sbjct: 136 NEGRKIQVDVMK--HGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRT-VVSWNAVL 192
Query: 401 GAC--EKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
AC ++ N G +V +P ++LS
Sbjct: 193 SACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLS 228
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 228/413 (55%), Gaps = 34/413 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLH 144
F +N+IIR YT + IY + R + PD +T P + K+ L + +G+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ G + E+ I +Y K D A KVFDE ER + SWN++++G ++ G+ K
Sbjct: 133 GHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMK 192
Query: 205 -------------------------------EAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
EA+D F ++ G EPD+++++SV +C
Sbjct: 193 KAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL +H Y + T + N+LI+MY KCG + A ++F + +V SW
Sbjct: 253 HLGSLELGKWIHMYA--ERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVISW 310
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI GYA +G A+ A + F M+ + ++PN +TF+G+LSAC H G Q+G +F+MM+
Sbjct: 311 STMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQGLKYFDMMRQ 370
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
YQIEP+ HYGC++D+L RAG LE A + + MP+K + IWG L+ +C GN+ +
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPVKPDSKIWGSLLSSCRTKGNLDVAL 430
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL E+EP G YV+L+NIYA G WE+V R+R +++ N+ K P SL
Sbjct: 431 VAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKIIRKENMKKTPGCSL 483
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 147/336 (43%), Gaps = 33/336 (9%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++H+ + GL + F + + L K GD + A ++F++ + +N+II + +
Sbjct: 27 KKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 201 GRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK----- 254
+ I ++ L + E PD T + +C SLG L QVH ++++ +
Sbjct: 87 SLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVT 146
Query: 255 ------------------------QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
+ D + NSL+ Y + G+M A +F + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTI 206
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT+MI GY G EA+D F M+ +GI P+ ++ + VL +C H G ++ GK + M
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGK-WIHM 265
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + ++++ + G+L +A + E K +V+ W ++ GN
Sbjct: 266 YAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGK-DVISWSTMISGYAYHGNAH 324
Query: 411 MGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEE 445
+Q + +G ++ L + + GLW++
Sbjct: 325 RAFETFIEMQRAKVKPNGITFLGLLSACSHVGLWQQ 360
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 199/304 (65%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ Y KAGD AR++FD PER + SW +I G +Q R +EA+++F ++ G EPD
Sbjct: 151 MIAGYVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPD 210
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V ++SV SACG LG ++L VH++V V+ + + ++NS+IDMY KCG ++ A +V
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFV--VRRGLRQEIPLMNSIIDMYMKCGCIEKAVEV 268
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F +++ +V +WT++I G+A +GL +A++ F M + PN VTF+ +LSAC H G
Sbjct: 269 FEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLT 328
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ +F +M + Y+I+P+ HYGCMVDLLGRAG L+EA+ +V+ MP+KAN IWG L+
Sbjct: 329 DLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLA 388
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A G+ +GE HL ELEP + G Y++LSNI+A + W++V ++R MK R L +
Sbjct: 389 ASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNV 448
Query: 462 PAYS 465
P S
Sbjct: 449 PGAS 452
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 11/229 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y ++ P++A++++ M G+ PD L VL A L A+++G +H V
Sbjct: 179 WTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVV 238
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + I +Y K G EKA +VF+ E+ + +W +IAG + G +A++
Sbjct: 239 RRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVE 298
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSL 265
MF +++ P+DVT +++ SAC +G +L ++ F + Q K +
Sbjct: 299 MFRRMERENMAPNDVTFLAILSACSHVGLTDLG----RWYFNIMVSQYRIKPQVEHYGCM 354
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG---LANEAL 310
+D+ G+ G + A + ++ + N + W +++ +G L EAL
Sbjct: 355 VDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEAL 403
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 38/196 (19%)
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
L Q+H + + SDT + SL+ +Y C + A VF E+ +V +W MI G
Sbjct: 96 LGPQLHSLLLRT-GHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAG 154
Query: 300 YAANG-LAN------------------------------EALDCFHYMRESGIRPNHVTF 328
Y G LA+ EA++ F M+ GI P+ V
Sbjct: 155 YVKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVAL 214
Query: 329 VGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ VLSAC G V G+ H F + + + Q P ++D+ + G +E+A + EG
Sbjct: 215 LSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLM---NSIIDMYMKCGCIEKAVEVFEG 271
Query: 387 MPMKANVVIWGCLMGA 402
M K +VV W L+
Sbjct: 272 MEEK-SVVTWTTLIAG 286
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 216/380 (56%), Gaps = 8/380 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++A+D++ + +G+ PD + + VL+A +L LE GR +
Sbjct: 173 WTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMR 232
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL N F + + +Y+K G E+AR VFD E+ + W+A+I G + +G +EAI+
Sbjct: 233 ECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIE 292
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL---ALQVHKYVFQVKSKQKSDTLMLNSL 265
+F ++K PD MV S+C SLG LEL A + Y + S+ ++ SL
Sbjct: 293 LFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNY-----EEFLSNPVLGTSL 347
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
ID Y KCG M+ A V+ + + + + ++I G A G A F M + GI PN
Sbjct: 348 IDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNE 407
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TFVG+L C H G V +G+H+F M + + + P HYGCMVDLL RAG L+EA +++
Sbjct: 408 HTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIK 467
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
GMPMKANV++WG L+G C ++ E V K L ELEPW+ G YV+LSNIY++ W+E
Sbjct: 468 GMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDE 527
Query: 446 VERIRAVMKHRNLAKIPAYS 465
E+IR+ + + + K+P YS
Sbjct: 528 AEKIRSTVNEKGMQKLPGYS 547
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 3/328 (0%)
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
I+ H + S F +N +IR + A+ +Y M +A ++PD +T VLKA +
Sbjct: 57 ILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACAR 116
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L +G +HSL + G + + F ++ + YSK G A KVFD+ + + SW +
Sbjct: 117 LNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGM 176
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I G + G+ +EA+D+F GL + G PD +V V AC LGDLE + + + +
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ + + SL+DMY KCG M+ A VF + + ++ W++MI GYA+NGL EA++ F
Sbjct: 237 SR--NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
MR+ +RP+ VG LS+C G ++ G ++ + + N + ++D +
Sbjct: 295 FEMRKVNVRPDCYAMVGALSSCASLGALELG-NWAKGLMNYEEFLSNPVLGTSLIDFYAK 353
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMG 401
G +EEA + + M K VV + G
Sbjct: 354 CGSMEEALGVYKMMKEKDRVVFNAVISG 381
>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g01510, mitochondrial; Flags: Precursor
gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 584
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 222/381 (58%), Gaps = 4/381 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN + + Y R + P ++L +Y M GV PD +T P V+KA QL G LH+
Sbjct: 75 FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAH 134
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G + + +Y K G+ A +F+ + L +WNA +A Q G + A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F + + D T+VS+ SACG LG LE+ ++ Y K + + ++ N+ +
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI--YDRARKEEIDCNIIVENARL 252
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG + A +F E+ Q NV SW++MIVGYA NG + EAL F M+ G+RPN+V
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYV 312
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+GVLSAC H G V EGK +F +M N +EPR HY CMVDLLGR+GLLEEA +
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++ + IWG L+GAC ++ +G+ VA L E P +V+LSNIYA+ G W+
Sbjct: 373 KKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
V+++R+ M+ K+ AYS
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYS 453
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++H++ +R G + + GD AR+VFDE + ++ WN + G ++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
E++ ++ ++ G PD+ T V A LGD +H +V VK +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV--VKYGFGCLGI 145
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ L+ MY K G + A +F + ++ +W + + G + AL+ F+ M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++ + T V +LSAC G ++ G+ ++ + +I+ +D+ + G E A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 381 RAMVEGMPMKANVVIWGCLM 400
R + E M + NVV W ++
Sbjct: 265 RVLFEEMKQR-NVVSWSTMI 283
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/373 (39%), Positives = 224/373 (60%), Gaps = 3/373 (0%)
Query: 89 WNNIIRLYTRLEA-PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W II Y + ++A+++++ M + V P+ +T VLKA L + +G Q+++L
Sbjct: 217 WTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALV 276
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V++ L S + IS+YS+ G+ E ARK FD E+ L S+N I+ ++ ++EA
Sbjct: 277 VKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAF 336
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F ++ G + T S+ S S+G + Q+H + +KS KS+ + N+LI
Sbjct: 337 ELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRI--LKSGFKSNLHICNALIS 394
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG ++ A++VF E+ NV SWTSMI G+A +G A AL+ FH M E+G+ PN VT
Sbjct: 395 MYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVT 454
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
++ VLSAC H G + EG F+ MK + I PR HY C+VDLLGR+G LEEA +V M
Sbjct: 455 YIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P KA+ ++ +GAC GN+ +G+ A+ + E +P AY++LSN++AS G WEEV
Sbjct: 515 PFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVA 574
Query: 448 RIRAVMKHRNLAK 460
IR MK RNL K
Sbjct: 575 EIRKKMKERNLTK 587
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 18/327 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y E +A+ + M G P+ Y V +A + +G+ + +
Sbjct: 10 WSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLL 69
Query: 149 RLGLESNEFCES-GFISLYSKA-GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G ++ C I ++ K GD E A KVFD P+R + +W +I Q G +++A
Sbjct: 70 KTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDA 129
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+D+F+ + G+ PD T+ V SAC +G L L Q H V +KS D + SL+
Sbjct: 130 VDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLV--MKSGLDLDVCVGCSLV 187
Query: 267 DMYGKC---GRMDLAYKVFWEIDQPNVSSWTSMIVGYA-ANGLANEALDCFHYMRESGIR 322
DMY KC G +D A KVF + NV SWT++I GY + G EA++ F M + ++
Sbjct: 188 DMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----MVDLLGRAGLLE 378
PNH TF VL AC + + G+ + ++ ++ R A C ++ + R G +E
Sbjct: 248 PNHFTFSSVLKACANLSDIWLGEQVYALV-----VKMRLASINCVGNSLISMYSRCGNME 302
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEK 405
AR + + + N+V + ++ A K
Sbjct: 303 NARKAFDVL-FEKNLVSYNTIVNAYAK 328
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 17/234 (7%)
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+R L SW+A+I+ + + +A EAI F + +CGF P++ V AC + ++ L
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKC-GRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+ ++ + + SD + +LIDM+ K G ++ AYKVF + NV +WT MI +
Sbjct: 64 IFGFLLKTGYFE-SDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRF 361
G + +A+D F M SG P+ T GV+SAC G + G+ F + MK+ ++
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLD--- 179
Query: 362 AHYGC-MVDLLGRA---GLLEEARAMVEGMPMKANVVIWGCLM------GACEK 405
GC +VD+ + G +++AR + + MP+ NV+ W ++ G C++
Sbjct: 180 VCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH-NVMSWTAIITGYVQSGGCDR 232
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
++ ++ SW+++I YA N A EA+ F M E G PN F GV AC + + GK
Sbjct: 3 NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRA-GLLEEARAMVEGMPMKANVVIWGCLMGACE 404
F + E ++D+ + G LE A + + MP + NVV W ++ +
Sbjct: 63 IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDR-NVVTWTLMITRFQ 121
Query: 405 KFG 407
+ G
Sbjct: 122 QLG 124
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 235/427 (55%), Gaps = 39/427 (9%)
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
I+ H + W + I L TR +A + M+ AGV P+ T I L + C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITF-IALLSGCGD 83
Query: 135 F---ALEIGRQLHSLAVRLGLESNE-FCESGFISLYSKAGDFEKAR-------------- 176
F + +G LH A +LGL+ N + I +YSK G F+KAR
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 177 -----------------KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
K+FD+ PER L SW A+I G + G +EA+ F ++ G +
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD V +++ +AC +LG L L VH+YV K++ + NSLID+Y +CG ++ A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLS--QDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF+ +++ V SW S+IVG+AANG A+E+L F M+E G +P+ VTF G L+AC H G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG +F++MK Y+I PR HYGC+VDL RAG LE+A +V+ MPMK N V+ G L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 400 MGACEKFG-NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ AC G N+ + E + KHL +L S YV+LSN+YA+ G WE ++R MK L
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 459 AKIPAYS 465
K P +S
Sbjct: 442 KKQPGFS 448
>gi|255564780|ref|XP_002523384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537334|gb|EEF38963.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 233/431 (54%), Gaps = 39/431 (9%)
Query: 70 IYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF--MSRAGVLPDCYTLPIV 127
+YA+ + T + H F +N IIR + +P+ +L I++F + A + PD Y+ P
Sbjct: 60 LYAYSLFTSLTHP-PNIFLYNTIIRALSL--SPQPSLSIFLFNRIQSARLRPDSYSFPFA 116
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS-------------------- 167
LKA +L A + G Q HS A+R GL S+ I +YS
Sbjct: 117 LKAVIRLSATKTGLQFHSQAIRFGLHSHLHVLVSLIRMYSSSHISDARKLFDGIPLTARN 176
Query: 168 ------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
K D A+ +FD P+R L SW A+I+G + R +AI +F ++
Sbjct: 177 VALWNAMLTSYAKICDMPNAQHLFDSMPQRNLISWTALISGYAHINRPHQAIAIFRTMQL 236
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
PD++T+++V SAC LG LEL + Y+ + ++ L N+LIDMY K G +
Sbjct: 237 QNVVPDEITLLAVLSACAQLGALELGEWIRNYI-DIHGLHRNVPLH-NALIDMYAKSGNI 294
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A +F + + +WT+MI G A +GL +AL+ F M ++PN +TF+ VLSAC
Sbjct: 295 KRALLIFESMKHKTIVTWTTMIAGLALHGLGTQALEMFSRMERDRVKPNEITFIAVLSAC 354
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
H G VQ + FF M++ Y I+P+ HYGCM+DLLGRAG L+EA+ +++ MP + N I
Sbjct: 355 SHVGLVQLARSFFTNMRSRYTIQPKIEHYGCMIDLLGRAGYLQEAQQLLQQMPFEPNAAI 414
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKH 455
WG L+ A G+ +GE KHL ELEP + G Y +LSNIYAS G W+ +R +M+
Sbjct: 415 WGSLLAASYTHGDAMLGERTLKHLIELEPNNSGNYALLSNIYASLGRWKASRIVRKMMRD 474
Query: 456 RNLAKIPAYSL 466
R + KIP S
Sbjct: 475 RGVKKIPGGSF 485
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +T+ K AL+ + M G+ P+ T+ L A Q+ L++G+++H +
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +E + S IS+YS E A VF E R + WN+II+ +Q GR+ A+D
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + E + VTMVS AC L L ++H+++ ++ + +LNSLIDM
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI--IRCGLDTCNFILNSLIDM 644
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YG+CG + + ++F + Q ++ SW MI Y +G +A++ F R G++PNH+TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITF 704
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+LSAC H G ++EG +F+MMK Y ++P Y CMVDLL RAG E +E MP
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ N +WG L+GAC N + E+ A++L ELEP S G YV+++NIY++ G WE+ +
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K P S
Sbjct: 825 IRCLMKERGVTKPPGCS 841
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 189/425 (44%), Gaps = 28/425 (6%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE--APKKALDIYI 110
IVA+ +K NL +L I S NN L + ++ P + ++IY
Sbjct: 34 IVASTNTKTQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIY- 92
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
A +L C +L+ L +G Q+H+ V G++ EF S + +Y + G
Sbjct: 93 ----ASILQKCR----------KLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTG 138
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
E AR++FD+ ER + SW AI+ G +E I +F + G PD V
Sbjct: 139 CVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 198
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC L + + V+ Y+ + + ++ + S++DM+ KCGRMD+A + F EI+ +V
Sbjct: 199 ACSELKNYRVGKDVYDYMLSIGFE--GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W M+ GY + G +AL C M+ SG++P+ VT+ ++S G+ +E +F
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEKFG 407
M + +P + ++ + G EA ++ M + K N + + AC
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376
Query: 408 NVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL----AKI 461
++ G + + ++E V L + YA E R ++K +L A +
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436
Query: 462 PAYSL 466
Y+L
Sbjct: 437 AGYAL 441
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ F WN ++ YT KKAL M +GV PD T
Sbjct: 253 FKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW------------------ 294
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-----NPERKLGSWNAIIAGL 197
+ IS Y+++G FE+A K F E + + + SW A+IAG
Sbjct: 295 -----------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGS 337
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
Q+G EA+ +F + G +P+ +T+ S SAC +L L ++H Y +V+ + S
Sbjct: 338 EQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDS 396
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D L+ NSL+D Y KC +++A + F I Q ++ SW +M+ GYA G EA++ M+
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
GI P+ +T+ G+++ G + FF+ M
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 40/333 (12%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGF 162
+AL ++ M GV P+ T+ + A L L GR++H +++ L+S+ +
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNA------------------------------ 192
+ Y+K E AR+ F + L SWNA
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 193 -----IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
++ G +Q G K A++ F + G +P+ T+ +ACG + +L+L ++H Y
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY 524
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
V +++ + T + ++LI MY C +++A VF E+ +V W S+I A +G +
Sbjct: 525 V--LRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
ALD M S + N VT V L AC +++GK + + F +
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI-LNSL 641
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+D+ GR G ++++R + + MP + ++V W ++
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMI 673
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 225/389 (57%), Gaps = 16/389 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N++I+ ++L P + Y M + V P YT V+K+ L AL IG+ +H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV G + + ++ ++ YSK GD E AR+VFD PE+ + +WN++++G Q+G A EA
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEA 192
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN--- 263
I +F +++ GFEPD T VS+ SAC G + L VH+Y+ S+ L LN
Sbjct: 193 IQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-------SEGLDLNVKL 245
Query: 264 --SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-G 320
+LI++Y +CG + A +VF ++ + NV++WT+MI Y +G +A++ F+ M + G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PN+VTFV VLSAC H G V+EG+ ++ M Y++ P H+ CMVD+LGRAG L+EA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 381 RAMVEGMPMKANVV---IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+ + +W ++GAC+ N +G +AK L LEP + G +V+LSNIY
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A G +EV IR M NL K YS+
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 151/406 (37%), Positives = 227/406 (55%), Gaps = 10/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++L ++ + R M+ W ++I Y + + P +A+ + M + P
Sbjct: 98 KCRSVLDARNVFDQMRRKDMVS-------WTSLIAGYAQNDMPVEAIGLLPGMLKGRFKP 150
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ +T +LKA+ GRQ+H+LAV+ G + + S + +Y++ G + A VF
Sbjct: 151 NGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVF 210
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ + SWNA+I+G ++ G + A+ F + + GFE T SV S+ LG LE
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALE 270
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
VH +V +KS+QK + N+L+DMY K G M A KVF +D ++ +W SM+
Sbjct: 271 QGKWVHAHV--IKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTA 328
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+A GL EA+ F MR+SG+ N +TF+ +L+AC HGG V+EGK +FEMMK Y +EP
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEP 387
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
HY +V LLGRAGLL A + MPM+ +WG L+ AC N K+G++ A H+
Sbjct: 388 EIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHV 447
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL+P G V+L NIYAS G W+ R+R +MK + K PA S
Sbjct: 448 FELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACS 493
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 7/295 (2%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A Q LE R++H+ + F ++ I +Y K AR VFD+ + +
Sbjct: 58 ITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMRRKDM 117
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW ++IAG +Q+ EAI + G+ K F+P+ T S+ A G+ D Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH-- 175
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
VK D + ++L+DMY +CG+MD+A VF ++D N SW ++I G+A G
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
AL F M +G H T+ V S+ G +++GK + Q F +
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVG-NTL 294
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
+D+ ++G + +AR + + + K ++V W ++ A ++G +G+ H +E+
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDNK-DLVTWNSMLTAFAQYG---LGKEAVSHFEEM 345
>gi|317106766|dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 165/426 (38%), Positives = 249/426 (58%), Gaps = 16/426 (3%)
Query: 46 THEDPAKIVATQLSKCTNLLQL----NQIYAHIIRTHMLHSYSAAFHWNNIIR--LYTRL 99
TH P V+ +SK + L N YA I + + + F +N++IR LYT++
Sbjct: 13 THVPPISSVSFLISKILSFAALSPFGNFDYARKIFSQIPNP--GIFAYNSVIRGCLYTKI 70
Query: 100 EAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
+ K+ + ++ M G P+ +T+ VLKA + ALE G+Q+H+ +R G S+ +
Sbjct: 71 PS-KEPIHLFKDMVGKGYPNPNTFTMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYV 129
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+S ++ YSK + ARKVFDE ER L W+A+++G ++ G EA+ MF ++ G
Sbjct: 130 QSSLVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGI 189
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDL 277
EPD+V++V V SAC +G L++ VH Y +K + L LN+ LI+MY KCG ++
Sbjct: 190 EPDEVSLVGVLSACAMVGALDIGKWVHAY---IKKRMIHVDLELNTALINMYAKCGCIEK 246
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F E+ + +W+SMIVG A +GLA +AL+ F M E+ +PNHVTF+G+LSAC H
Sbjct: 247 AREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPNHVTFIGILSACAH 306
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
GG V +GK ++ M + IEP HYGCMVDLL R GL++EA +P + VIW
Sbjct: 307 GGLVSDGKRYWSSMLEL-GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWR 364
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ A K ++ E VA L ELEPW Y++L+N+YAS E+V +R +MK
Sbjct: 365 TLLVAYTKNRMLQKAEMVAGKLLELEPWKAENYIILANLYASVSQLEKVSHVRKMMKENG 424
Query: 458 LAKIPA 463
+ +P
Sbjct: 425 IKALPG 430
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 221/378 (58%), Gaps = 7/378 (1%)
Query: 89 WNNIIRLYTR-LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I ++R L A Y V P+ T+ ++ A AL+ G+ +H
Sbjct: 108 WNSLISGFSRCLHMSLTAF--YTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFG 163
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++G + I++Y K+GD A ++F+ P+ SWN+IIA +G A+E I
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D F +++ G E D+ T++++ AC LG +LA +H +F K + +L+D
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK--ITIATALLD 281
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y K GR+ +Y VF E+ + +WT+M+ GYAA+GL EA+ F M G+ P+HVT
Sbjct: 282 TYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVT 341
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F +LSAC H G V EGK +F +M VY IEPR HY CMVDLLGR GLL +A +++ M
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNM 401
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ N +WG L+GAC GN+++G+ VA+HL +EP Y++LSN+Y++ W++
Sbjct: 402 PMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAA 461
Query: 448 RIRAVMKHRNLAKIPAYS 465
++RA++K R L + P YS
Sbjct: 462 KVRALLKERGLKRTPGYS 479
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R++H+ + L + F ++ Y+K G E A K+FD+ P + L SWN++I+G S+
Sbjct: 59 REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR- 117
Query: 201 GRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV--FQVKSKQKS 257
++ F +K + +P++VT++S+ SAC AL KY+ F +K
Sbjct: 118 -CLHMSLTAFYTMKFEMSVKPNEVTILSMISACSG------ALDAGKYIHGFGIKVGGTL 170
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + NSLI+MYGK G + A ++F I PN SW S+I NG A E +D F+ MR
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 318 ESGIRPNHVTFVGVLSACVH--GGKVQEGKH 346
GI + T + +L AC+H GK+ E H
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIH 261
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 230/407 (56%), Gaps = 9/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S C L+ +++ ++ + W +I Y + + P +A+ ++ M A V
Sbjct: 183 SNCGCLVSARKVFDKMVN-------KSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVK 235
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ TL VL A + LE +Q+H G+ + S + +Y K G + AR +
Sbjct: 236 PNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDL 295
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ PE+ L WN +I G +D +EA+ +F ++ G + D VTM S+ AC LG L
Sbjct: 296 FNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGAL 355
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
EL +H Y+ K K + D + +L+DMY KCG ++ A +VF E+ + +V +WT++IV
Sbjct: 356 ELGKWLHVYI--EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A G +AL+ FH M+ S ++P+ +TFVGVL+AC H G V EG +F M N Y I+
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYGCMVD+LGRAG + EA +++ MPM + + L+ AC GN+ + E A+
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQ 533
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L EL+P + G YV+LSNIY+S WE +++R +M RN+ K P S
Sbjct: 534 LIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCS 580
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 193/373 (51%), Gaps = 37/373 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHM-LHSYSAA-----------------------------F 87
L KCT + QL QI+A ++RT + + +SA+ F
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTF 106
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N+IIR YT P++A+ Y M G+ PD +T P + K SC + G+QLH +
Sbjct: 107 TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFK-SCGVLCE--GKQLHCHS 163
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+LG S+ + ++ +++YS G ARKVFD+ + + SW +I +Q EAI
Sbjct: 164 TKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAI 223
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ +P+++T+V+V +AC DLE A QVHKY+ + + T++ ++L+D
Sbjct: 224 KLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDE--TGIGFHTVLTSALMD 281
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG LA +F ++ + N+ W MI G+ + EAL F+ M+ SG++ + VT
Sbjct: 282 VYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVT 341
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+L AC H G ++ GK + + +IE A +VD+ + G +E A + + M
Sbjct: 342 MASLLIACTHLGALELGK-WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEM 400
Query: 388 PMKANVVIWGCLM 400
P K +V+ W L+
Sbjct: 401 PEK-DVMTWTALI 412
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +T+ K AL+ + M G+ P+ T+ L A Q+ L++G+++H +
Sbjct: 467 WNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVL 526
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +E + S IS+YS E A VF E R + WN+II+ +Q GR+ A+D
Sbjct: 527 RNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALD 586
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + E + VTMVS AC L L ++H+++ ++ + +LNSLIDM
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFI--IRCGLDTCNFILNSLIDM 644
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YG+CG + + ++F + Q ++ SW MI Y +G +A++ F R G++PNH+TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITF 704
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+LSAC H G ++EG +F+MMK Y ++P Y CMVDLL RAG E +E MP
Sbjct: 705 TNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMP 764
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ N +WG L+GAC N + E+ A++L ELEP S G YV+++NIY++ G WE+ +
Sbjct: 765 FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAK 824
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K P S
Sbjct: 825 IRCLMKERGVTKPPGCS 841
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 189/425 (44%), Gaps = 28/425 (6%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE--APKKALDIYI 110
IVA+ +K NL +L I S NN L + ++ P + ++IY
Sbjct: 34 IVASTNTKSQNLRKLTNARQRITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIY- 92
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
A +L C +L+ L +G Q+H+ V G++ EF S + +Y + G
Sbjct: 93 ----ASILQKCR----------KLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTG 138
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
E AR++FD+ ER + SW AI+ G +E I +F + G PD V
Sbjct: 139 CVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 198
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC L + + V+ Y+ + + ++ + S++DM+ KCGRMD+A + F EI+ +V
Sbjct: 199 ACSELKNYRVGKDVYDYMLSIGFE--GNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W M+ GY + G +AL C M+ SG++P+ VT+ ++S G+ +E +F
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEKFG 407
M + +P + ++ + G EA ++ M + K N + + AC
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376
Query: 408 NVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL----AKI 461
++ G + + ++E V L + YA E R ++K +L A +
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436
Query: 462 PAYSL 466
Y+L
Sbjct: 437 AGYAL 441
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 41/274 (14%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ F WN ++ YT KKAL M +GV PD T
Sbjct: 253 FKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW------------------ 294
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-----NPERKLGSWNAIIAGL 197
+ IS Y+++G FE+A K F E + + + SW A+IAG
Sbjct: 295 -----------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGS 337
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
Q+G EA+ +F + G +P+ +T+ S SAC +L L ++H Y +V+ + S
Sbjct: 338 EQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDS 396
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D L+ NSL+D Y KC +++A + F I Q ++ SW +M+ GYA G EA++ M+
Sbjct: 397 DLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMK 456
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
GI P+ +T+ G+++ G + FF+ M
Sbjct: 457 FQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 151/333 (45%), Gaps = 40/333 (12%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGF 162
+AL ++ M GV P+ T+ + A L L GR++H +++ L+S+ +
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNA------------------------------ 192
+ Y+K E AR+ F + L SWNA
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 193 -----IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
++ G +Q G K A++ F + G +P+ T+ +ACG + +L+L ++H Y
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY 524
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
V +++ + T + ++LI MY C +++A VF E+ +V W S+I A +G +
Sbjct: 525 V--LRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSV 582
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
ALD M S + N VT V L AC +++GK + + F +
Sbjct: 583 NALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI-LNSL 641
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+D+ GR G ++++R + + MP + ++V W ++
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMI 673
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 223/378 (58%), Gaps = 7/378 (1%)
Query: 89 WNNIIRLYTR-LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I ++R L A Y V P+ T+ + + ++C AL+ G+ +H
Sbjct: 108 WNSLISGFSRCLHMSLTAF--YTMKFEMSVKPNEVTI-LSMISACN-GALDAGKYIHGFG 163
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++G + I++Y K+GD A ++F+ P+ SWN+IIA +G A+E I
Sbjct: 164 IKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGI 223
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D F +++ G E D+ T++++ AC LG +LA +H +F K + +L+D
Sbjct: 224 DYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAK--ITIATALLD 281
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y K GR+ +Y VF E+ + +WT+M+ GYAA+GL EA+ F M G+ P+HVT
Sbjct: 282 TYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVT 341
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F +LSAC H G V EGK +F +M VY IEPR HY CMVDLLGR GLL +A +++ M
Sbjct: 342 FTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNM 401
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ N +WG L+GAC GN+++G+ VA+HL +EP Y++LSN+Y++ W++
Sbjct: 402 PMEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAA 461
Query: 448 RIRAVMKHRNLAKIPAYS 465
++RA++K R L + P YS
Sbjct: 462 KVRALLKERGLKRTPGYS 479
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 13/211 (6%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R++H+ + L + F ++ Y+K G E A K+FD+ P + L SWN++I+G S+
Sbjct: 59 REIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSR- 117
Query: 201 GRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV--FQVKSKQKS 257
++ F +K + +P++VT++S+ SAC AL KY+ F +K
Sbjct: 118 -CLHMSLTAFYTMKFEMSVKPNEVTILSMISACNG------ALDAGKYIHGFGIKVGGTL 170
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + NSLI+MYGK G + A ++F I PN SW S+I NG A E +D F+ MR
Sbjct: 171 EVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMR 230
Query: 318 ESGIRPNHVTFVGVLSACVH--GGKVQEGKH 346
GI + T + +L AC+H GK+ E H
Sbjct: 231 RLGIEQDEGTILALLQACLHLGVGKLAESIH 261
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 245/452 (54%), Gaps = 43/452 (9%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYT-RLEAPKKALD 107
D KI+ +L + NL YAH + H F +N +I+ Y+ + +
Sbjct: 17 DQTKILIEKLLEIPNLH-----YAHKVLHH--SPKPTLFLYNKLIQAYSSHPQHQHQCFS 69
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+Y M LP+ +T + A L + +G+ LH+ ++ G E + F + + +Y+
Sbjct: 70 LYSQMLLHSFLPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYT 129
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF----------------- 210
K G E ARK+FD+ P R + +WNA++AG ++ G A+++F
Sbjct: 130 KVGTLELARKLFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISG 189
Query: 211 ----------IGL-----KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+GL ++ G P+ VT+ S+ A +LG LE+ +V Y K+
Sbjct: 190 YSRSKKYGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYA--RKNGF 247
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ-PNVSSWTSMIVGYAANGLANEALDCFH 314
+ + N++++MY KCG++D+A+KVF EI N+ SW SMI+G A +G + L +
Sbjct: 248 FKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKTLKLYD 307
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M G P+ VTFVG+L AC HGG V++G+H F+ M + I P+ HYGCMVDLLGRA
Sbjct: 308 QMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRA 367
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G L EA +++ MPMK + VIWG L+GAC NV++ E A+ L LEPW+ G YV+LS
Sbjct: 368 GQLREAYEVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILS 427
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
NIYAS G W+ V ++R VMK + K +S
Sbjct: 428 NIYASAGQWDGVAKLRKVMKGSKITKSAGHSF 459
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 220/377 (58%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + E L I+ M G P+ YT +L++ L +++G+Q+H+ V
Sbjct: 260 WTALITGFVA-EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIV 318
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ L+ N+F + + +Y+K E A +F+ +R L +W I+AG +QDG+ ++A+
Sbjct: 319 KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVK 378
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
FI +++ G +P++ T+ S S C + L+ Q+H +K+ Q D + ++L+DM
Sbjct: 379 CFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS--MAIKAGQSGDMFVASALVDM 436
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A VF + + SW ++I GY+ +G +AL F M + G P+ VTF
Sbjct: 437 YAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTF 496
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G ++EGK F + +Y I P HY CMVD+LGRAG E + +E M
Sbjct: 497 IGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMK 556
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +NV+IW ++GAC+ GN++ GE A L ELEP D Y++LSN++A++G+W++V
Sbjct: 557 LTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTN 616
Query: 449 IRAVMKHRNLAKIPAYS 465
+RA+M R + K P S
Sbjct: 617 VRALMSTRGVKKEPGCS 633
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 144/316 (45%), Gaps = 7/316 (2%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN + ++A+ ++ M + + + ++ A+ L G +H+
Sbjct: 57 QWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACV 116
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G ES+ + F+++Y K E + F L S N +++G +
Sbjct: 117 CKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGP 176
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ I L GFEP+ T +S+ C S GDL +H V +KS D+ + NSL++
Sbjct: 177 RILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQV--IKSGINPDSHLWNSLVN 234
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG + A KVF EI + +V SWT++I G+ A G + L F+ M G PN T
Sbjct: 235 VYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYT 293
Query: 328 FVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F+ +L +C V GK +++KN ++ +VD+ + LE+A +
Sbjct: 294 FISILRSCSSLSDVDLGKQVHAQIVKN--SLDGNDFVGTALVDMYAKNRFLEDAETIFNR 351
Query: 387 MPMKANVVIWGCLMGA 402
+ +K ++ W ++
Sbjct: 352 L-IKRDLFAWTVIVAG 366
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W I+ Y + +KA+ +I M R GV P+ +TL L ++ L+ GRQLHS+
Sbjct: 358 FAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSM 417
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A++ G + F S + +Y+K G E A VFD R SWN II G SQ G+ +A
Sbjct: 418 AIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKA 477
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ F + G PD+VT + V SAC +G +E + K+ NSL
Sbjct: 478 LKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIE------------EGKKH-----FNSLS 520
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+YG P + + M+ G +E ++ E + N +
Sbjct: 521 KIYGI---------------TPTIEHYACMVDILGRAGKFHEVES---FIEEMKLTSNVL 562
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEE 379
+ VL AC G ++ G+ MK ++++EP ++Y + ++ G+ ++
Sbjct: 563 IWETVLGACKMHGNIEFGER--AAMK-LFELEPEIDSNYILLSNMFAAKGMWDD 613
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 139/335 (41%), Gaps = 41/335 (12%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
S +++Y K + AR+V +E P + + WN ++ + +EA+ +F ++
Sbjct: 28 SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIR 87
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
+ S+ SA SLGD +H V K +SD L+ N+ + MY K ++ +
Sbjct: 88 LNQFIFASLISAAASLGDNHYGESIHACV--CKYGFESDILISNAFVTMYMKTQSVENGW 145
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+ F + N++S +++ G+ ++ + G PN TF+ +L C G
Sbjct: 146 QFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKG 205
Query: 340 KVQEGK---------------HFFEMMKNVYQIEPRFAHYGCMV-------DLLGRAGLL 377
+ EGK H + + NVY + A+Y C V D++ L+
Sbjct: 206 DLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA-KCGSANYACKVFGEIPERDVVSWTALI 264
Query: 378 EEARAMVEGMPMK-----------ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
A G ++ N+ + ++ +C +V +G+ V H Q ++
Sbjct: 265 TGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV--HAQIVKNSL 322
Query: 427 DGAYVV---LSNIYASRGLWEEVERIRAVMKHRNL 458
DG V L ++YA E+ E I + R+L
Sbjct: 323 DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDL 357
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 221/374 (59%), Gaps = 5/374 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I Y R + ++ M V P+ T+ ++ A + L++GR +H
Sbjct: 174 WNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYM 233
Query: 148 VR-LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ + L E+ I+LY K G + ARK+FDE PE+ WN++I G Q G E
Sbjct: 234 MKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEV 293
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I++ + +PD T+ V SAC +G L VH++ + K D + +LI
Sbjct: 294 IELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFA---EKKGIWDVFIGTALI 350
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG + A KVF ++++ NV++W +++ GYA++G A A++ F MRESG RP+ +
Sbjct: 351 DMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSI 410
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+ VL AC H G V+ GK +F++M Y+I PR HYGCMVDLLGRAGLL+EAR +++
Sbjct: 411 TFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKM 470
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M ++ NVV+WG L+ AC GN+++GEW A H+ +L G+YV+L+N+YAS + V
Sbjct: 471 MVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRV 530
Query: 447 ERIRAVMKHRNLAK 460
+ +R +M + + K
Sbjct: 531 KAVREMMVEKGICK 544
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 189/397 (47%), Gaps = 39/397 (9%)
Query: 46 THEDPAKIVATQLSKCTNLLQLNQI----------YAHIIRTHMLHSYSA---------- 85
T + P ++A + CTN+ QL QI Y I T +++S+ +
Sbjct: 2 TIQTPKSVLAL-IETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQV 60
Query: 86 --------AFHWNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFA 136
F +N +IR Y+ + P A+ IY M +L D YT P V KA FA
Sbjct: 61 FNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFA 120
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+E G+++H + VR+G E + F +S ++ Y G+ A++VFDE + + WNA+I G
Sbjct: 121 VEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITG 180
Query: 197 LSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
++ G ++ +F + + P++ TM+ + AC +L+L +H Y+ + +
Sbjct: 181 YARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLR 240
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ L +LI++Y KCG +D A K+F EI + N W S+I GY G NE ++
Sbjct: 241 EGVKLE-AALINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLRE 299
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M S ++P+ T GVLSAC G G H F K ++ + A ++D+ +
Sbjct: 300 MHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGTA----LIDMYAK 355
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G + AR + + M + NV W ++ G +
Sbjct: 356 CGFIGAARKVFDQMNER-NVATWNAILSGYASHGQAE 391
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 221/397 (55%), Gaps = 33/397 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + ++ ++ M R G L D +TL +L A Q LEIGR +H +
Sbjct: 181 WNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRML 240
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVF----------------------------- 179
G + ES + +Y K GD AR+ F
Sbjct: 241 VSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARC 300
Query: 180 --DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
D PER + SWNA+I+ Q G+ EA+D++ ++ G PD++T+V+V SA G +GD
Sbjct: 301 WFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGD 360
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L + VH Y+ + D ++NSL+DMY KCG++D A +F E+ NV SW +I
Sbjct: 361 LTVGKMVHLYIRD--NIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVII 418
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G A + + F M P+ +TFV +LSAC HGG ++ G+H+FE M++VY +
Sbjct: 419 GGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNV 478
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+ HY CMVDLLGR G LE+A +++ MPMK +VV+WG L+GAC GNVK+G V K
Sbjct: 479 KHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIK 538
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L ELE S G +V++SN+ WE+++R+R +MK
Sbjct: 539 QLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMK 575
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 198/414 (47%), Gaps = 70/414 (16%)
Query: 58 LSKCTNLLQLNQIYAHII--------RTHMLHSYSA---AFH------------------ 88
L +C ++ +LNQ++AH++ +L SY A A H
Sbjct: 18 LRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLFDGIPGPDR 77
Query: 89 --WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+N IIR Y P++AL ++ M R G+LP+ +TLP V+KA A E +H +
Sbjct: 78 VMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAVHGV 137
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A+RLGL F + + Y+ AG +R+ FDE +R + SWN++I G +Q G +E
Sbjct: 138 ALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREV 197
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F +++ GF D+ T+VS+ AC G+LE+ VH + S + D ++ ++L+
Sbjct: 198 CSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRML--VSGSRVDLILESALV 255
Query: 267 DMYGKCGRMDLAYKVF-----------------------------WEIDQP--NVSSWTS 295
DMYGKCG + +A + F W P N+ SW +
Sbjct: 256 DMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNA 315
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKN 353
MI Y G +EALD ++ M+ G+ P+ +T V VLSA G + GK H + + N
Sbjct: 316 MISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLY-IRDN 374
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+Y P + ++D+ + G ++ A ++ M + NVV W ++G G
Sbjct: 375 IYN--PDVSLVNSLLDMYAKCGQVDTAISLFSEMCNR-NVVSWNVIIGGLAMHG 425
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 125/286 (43%), Gaps = 9/286 (3%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR++FD P +N II +EA+ + G+ + G P++ T+ V AC
Sbjct: 65 ARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTI 124
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
E AL VH ++ + N+L+ Y G + + + F E+ NV SW
Sbjct: 125 AQAREHALAVHGVALRL--GLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWN 182
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKN 353
SMI GYA G E F MR G + T V +L AC G ++ G+ M+ +
Sbjct: 183 SMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVS 242
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+++ +VD+ G+ G L AR E MP+K+ VV W ++ A K G+V
Sbjct: 243 GSRVDLILE--SALVDMYGKCGDLWMARRCFEMMPIKS-VVSWTSMLCAQTKHGSVNAAR 299
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
H+ E S A + + Y RG E + M+ + LA
Sbjct: 300 CWFDHMPERNIVSWNAMI---SCYVQRGQCHEALDLYNQMQSQGLA 342
>gi|413947864|gb|AFW80513.1| hypothetical protein ZEAMMB73_142876 [Zea mays]
Length = 582
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 234/444 (52%), Gaps = 40/444 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
LS+C + +I A ++ + L S H + +IR +R P AL +Y + RAG+
Sbjct: 11 LSRCGEARAIVRIQAALLTSGQL-PRSVELH-DALIRALSRSARPHLALPLYAHLLRAGL 68
Query: 118 LPDCYTLPIVLKASCQLFALE----IGRQLHSLAVRLGLE-----SNEF--CESGF---- 162
LP +TLP +LK+ A+ + +H+ AV+LGL+ SN +GF
Sbjct: 69 LPTPHTLPSLLKSMALSPAVPGAAVLALTVHTHAVKLGLDRFVLVSNALIRVHAGFLGSL 128
Query: 163 ---------------------ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
I+ Y++AG AR +FDE P R SW+A++ G Q G
Sbjct: 129 ADGLLLLRTAAAVDASTFNTLITAYARAGRLADARALFDEMPARNAVSWSAMVNGYVQAG 188
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+ +F ++ PDD +V V +AC G LE VH Y+ K +
Sbjct: 189 DGREALRIFARMQAEDVRPDDTVLVGVLAACAQHGALEQGKWVHGYL--KAHGIKINLFF 246
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+L+DMY KCG + LA VF + NV +WT+MI G A +G +EA+ F M SGI
Sbjct: 247 GTALVDMYSKCGEVQLAMDVFERMQYKNVLAWTTMIKGLAMHGRGSEAVMLFAQMESSGI 306
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RP+ + F+GVL AC H G V +G+ F+ M Y I+P+ HYGCMVDLL R G L EA+
Sbjct: 307 RPDDIAFIGVLCACTHAGLVDKGRELFDSMVRKYGIKPKIEHYGCMVDLLARNGFLYEAK 366
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
M++ MPM+ + +IWG LM C NV+ E+VAKH LEP GAYV+LSNIYA+ G
Sbjct: 367 EMIQKMPMEPDALIWGALMAGCRFHKNVEFAEYVAKHWILLEPDKSGAYVLLSNIYAASG 426
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
IR +M+ + + K P S
Sbjct: 427 RHASAREIRHLMREKGVDKTPGCS 450
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 218/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + + A++ + M ++ V P+ YT V+ A L + G Q+H +
Sbjct: 327 WTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVL 386
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLGL + ++LYSK+G + A VF + + SW+ IIA SQ G AKEA D
Sbjct: 387 RLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFD 446
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+++ G +P++ + SV S CGS+ LE QVH +V + + ++ ++LI M
Sbjct: 447 YLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDH--EAMVHSALISM 504
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A K+F + N+ SWT+MI GYA +G + EA++ F + G++P++VTF
Sbjct: 505 YSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTF 564
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V G ++F +M N YQI P HYGC++DLL RAG L EA M+ MP
Sbjct: 565 IGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMP 624
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ V+W L+ +C G+V G W A+ L L+P S G ++ L+NIYA++G W+E
Sbjct: 625 CYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAH 684
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK + + K +S
Sbjct: 685 IRKLMKSKGVIKERGWS 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 18/360 (5%)
Query: 63 NLLQLNQIYAHIIRTHML---------HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM- 112
N+L+LN +++ L ++ W +I Y +AL ++ M
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 148
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
+ G+ D + + + LKA + G LH +V+ GL ++ F S I +Y K G
Sbjct: 149 VQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKI 208
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVTS 230
E+ +VF + +R + SW AIIAGL G EA+ F + + K G++ + S
Sbjct: 209 EQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKAS 268
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
A SL L +H +K + ++N+L MY KCG+ D ++F ++ P+V
Sbjct: 269 ADSSL--LHHGKAIHTQT--IKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDV 324
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT++I Y G A++ F MR+S + PN TF V+SAC + + G+
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + ++ + +V L ++GLL+ A + G+ K +++ W ++ + G K
Sbjct: 385 VLRLGLVDA-LSVANSIVTLYSKSGLLKSASLVFHGITRK-DIISWSTIIAVYSQGGYAK 442
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 146/299 (48%), Gaps = 8/299 (2%)
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
+++S+ G D +T I LKAS L G+ +H+ ++ G + + F + ++Y+K
Sbjct: 249 MWISKVGY--DSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC 306
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G + ++F++ + SW +I Q G + A++ F ++K P+ T +V
Sbjct: 307 GKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVI 366
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQP 288
SAC +L + Q+H +V ++ D L + NS++ +Y K G + A VF I +
Sbjct: 367 SACANLAIAKWGEQIHGHVLRLG---LVDALSVANSIVTLYSKSGLLKSASLVFHGITRK 423
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
++ SW+++I Y+ G A EA D +MR G +PN VLS C +++GK
Sbjct: 424 DIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVH 483
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ + I+ + ++ + + G +EEA + GM + N++ W ++ + G
Sbjct: 484 AHVLCI-GIDHEAMVHSALISMYSKCGSVEEASKIFNGMKIN-NIISWTAMINGYAEHG 540
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 212/361 (58%), Gaps = 2/361 (0%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
+L Y M + V P YT V+K+ L AL GR +H + G S+ + ++ +S
Sbjct: 95 SLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMS 154
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
Y K G ARKVFD+ +R + +WN++I+G Q+G AKEAI +F +K+ G EP+ T
Sbjct: 155 FYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSAT 214
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
VSV SAC LG L VH+Y V + + ++ SLI+MY +CG + A +VF
Sbjct: 215 FVSVLSACAHLGAFILGCWVHEYA--VGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDS 272
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + NV +WT+MI GY NG ++A++ FH MR +G+ PN +TFV VLSAC H G V EG
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEG 332
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ FE M+ Y++ P H+ C+VD+LGRAGLL+EA ++ + + IW ++GAC+
Sbjct: 333 RRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACK 392
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
N +G VA+H EP + YV+LSNIYA G ++VE +R M + L K Y
Sbjct: 393 MHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMDQVEMVRDNMIRKCLKKQVGY 452
Query: 465 S 465
S
Sbjct: 453 S 453
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 224/378 (59%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + P +AL I+ M + V PD L VL+A + LE G+ +H V
Sbjct: 238 WTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVV 297
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE ++Y+K G AR FD+ + WNA+I+G +++G EA+
Sbjct: 298 KMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVG 357
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + D +T+ S AC +G L+LA + Y+ K++ ++D + +LIDM
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYI--NKTEYRNDVFVNTALIDM 415
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG +DLA +VF +V W++MIVGY +G +A+D F+ M+++G+ PN VTF
Sbjct: 416 FAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTF 475
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+L+AC H G V+EG F MK Y IE R HY C+VDLLGR+G L EA + MP
Sbjct: 476 VGLLTACNHSGLVEEGWELFHSMK-YYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMP 534
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+GAC+ + +V +GE+ A+ L L+P++ G YV LSN+YAS LW+ V +
Sbjct: 535 IEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAK 594
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R +M+ + L+K YSL
Sbjct: 595 VRILMREKGLSKDLGYSL 612
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 173/316 (54%), Gaps = 4/316 (1%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F WN IIR Y+ A+++Y M +GV PD +TLP VLKA + LE+G+++H
Sbjct: 133 SVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVH 192
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
RLG ES+ F ++G ++LY+K G E+AR VF+ +R + SW ++I+G Q+G
Sbjct: 193 GQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPM 252
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F +++ +PD + +VSV A + DLE +H V ++ + + D L+ S
Sbjct: 253 EALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--S 310
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L MY KCG++ +A F +++ PNV W +MI GYA NG NEA+ F M IR +
Sbjct: 311 LTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTD 370
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+T + AC G + K + + F + ++D+ + G ++ AR +
Sbjct: 371 SITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVN-TALIDMFAKCGSVDLAREVF 429
Query: 385 EGMPMKANVVIWGCLM 400
+ + +VV+W ++
Sbjct: 430 D-RTLDKDVVVWSAMI 444
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 139/267 (52%), Gaps = 6/267 (2%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+H+ V GL + F + F++ G+ ARKVFDE PE + WNAII G S
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+AI+M+ ++ G PD T+ V AC + LE+ +VH +F++ +SD +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGF--ESDVFV 206
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N L+ +Y KCGR++ A VF +D N+ SWTSMI GY NGL EAL F MR+ +
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+P+ + V VL A +++GK ++K + EP + + + G + A
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVA 324
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFG 407
R+ + M + NV++W ++ K G
Sbjct: 325 RSFFDQMEI-PNVMMWNAMISGYAKNG 350
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 224/408 (54%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y R P++A+ IY M V PD T+ V+ A QL +L++GR++H
Sbjct: 223 WNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIE 282
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
GL + + +Y K GD E + +FD
Sbjct: 283 ESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGK 342
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ PE+ + +WNA+I Q + EA+++F ++ +PD VTM+ SAC LG
Sbjct: 343 LFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGA 402
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ + H Y+ K D + +LIDMY KCG M A +VF E+ + N +WT++I
Sbjct: 403 LDTGMWTHNYI--KKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAII 460
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A G N+A+ F M +SG+ P+ +TF+GVL+AC HGG V+EG+ +F+ MK+ + +
Sbjct: 461 GGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNL 520
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY CMV+LLGRAGLLEEA +++ MPM+A+ ++WG L AC N+ +GE A
Sbjct: 521 SPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAAS 580
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L +L+P G YV+L+N+Y G WEE + IR +M R + K P S
Sbjct: 581 KLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSS 628
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/446 (27%), Positives = 203/446 (45%), Gaps = 69/446 (15%)
Query: 28 THTFRKHVTISAASSFLDTHEDP-AKIVATQLSKCTNLLQLNQIYAHIIRTHM------- 79
+H+F H S +S+ TH + + + L C + QL QI A +I T +
Sbjct: 31 SHSFSTHK--SNPTSWNTTHTYVLSNPLLSLLENCKSFSQLKQIQAQMILTGLILDGFAS 88
Query: 80 --LHSYSA---------------------AFHWNNIIRLYTRLEAPKKALDIYIFM-SRA 115
L S+ A F WN +IR E P+K L +Y M +RA
Sbjct: 89 SRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRA 148
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G PD YT + K L +G ++ +++G + + + +G I + G+ A
Sbjct: 149 GCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLA 208
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
KVFDE R L SWN++I G + + +EA+ ++ + +PD+VTM+ V SAC L
Sbjct: 209 HKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQL 268
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L+L ++H+Y+ + K ++N+L+DMY KCG ++ +F + + V SWT+
Sbjct: 269 ESLKLGREIHRYIEESGLNLKIS--LVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTT 326
Query: 296 MIVGYAANGLAN-------------------------------EALDCFHYMRESGIRPN 324
MIVGYA NGL + EAL+ F M+ S ++P+
Sbjct: 327 MIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPD 386
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VT + LSAC G + G +K + + A ++D+ + G + +A +
Sbjct: 387 KVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDMYAKCGNMTKALQVF 445
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVK 410
MP + N + W ++G +GNV
Sbjct: 446 NEMP-RRNSLTWTAIIGGLALYGNVN 470
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 218/377 (57%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + P +AL + M R P+ +T +LKA+ + IG Q+H+L V
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + S + +Y++ G + A VFD+ + SWNA+IAG ++ G + +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF +++ GFE T SV SA +G LE VH ++ +KS ++ + N+++DM
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAFVGNTILDM 310
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +D+ +V +W SM+ +A GL EA+ F MR+ G+ N +TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L+AC HGG V+EGK +F+MMK Y +EP HY +VDLLGRAGLL +A + MP
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK +WG L+G+C N K+G++ A H+ EL+P G V+L NIYAS G W+ R
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 490 VRKMMKATGVKKEPACS 506
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 150/298 (50%), Gaps = 9/298 (3%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
++ A + +L+ R +H+ + F ++ I LY K G AR+VFD P R
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW ++IAG +Q+ EA+ + G+ + F+P+ T S+ A G+ + Q+H
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH- 188
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
VK D + ++L+DMY +CGRMD+A VF +++ N SW ++I G+A G
Sbjct: 189 -ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 247
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYG 365
L F M+ +G H T+ V SA G +++GK M+K+ ++ +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN-- 305
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++D+ ++G + +AR + + + K +VV W ++ A ++G +G H +E+
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYG---LGREAVTHFEEMR 359
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y + + ++++ M GV D TL V+ A ++ ++G+ +
Sbjct: 188 WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVD 247
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL N + I +Y+K G+ KAR++FD R + +W+A+I+G +Q + +EA+
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALA 307
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LID 267
+F ++ EP+DVTMVSV SAC LG LE VH Y+ + K+ S T++L + L+D
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYI---RRKRLSLTIILGTALVD 364
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG +D A + F + N +WT++I G A NG EAL+ F MR++ I P VT
Sbjct: 365 FYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVT 424
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVL AC H V+EG+ F+ M Y I+PR HYGC+VDLLGRAGL++EA + M
Sbjct: 425 FIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTM 484
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ N VIW L+ +C NV++GE K + L P G Y++LSNIYAS G W+
Sbjct: 485 PIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAA 544
Query: 448 RIRAVMKHRNLAKIPAYSL 466
IR MK R + K P SL
Sbjct: 545 MIRKEMKDRGIEKTPGCSL 563
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 5/313 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+N ++R P+ AL +++ M A V PD +T+ LK+ ++ L++GR + + A
Sbjct: 86 YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL ++ F S I +Y+ D A+ +FD E + WNAII ++G E +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+MF G+ + G D++T+VSV +ACG +GD +L V +YV + K ++ LM +LID
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDE-KGLVRNRNLM-TALID 263
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A ++F + +V +W++MI GY EAL F M+ + + PN VT
Sbjct: 264 MYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVT 323
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V VLSAC G ++ GK ++ ++ +VD + G +++A E M
Sbjct: 324 MVSVLSACAVLGALETGKWVHSYIRR-KRLSLTIILGTALVDFYAKCGCIDDAVEAFESM 382
Query: 388 PMKANVVIWGCLM 400
P+K N W L+
Sbjct: 383 PVK-NSWTWTALI 394
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 249/470 (52%), Gaps = 64/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSA-------------------------------A 86
L +C+ +L QI+A +++T ++ A
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR ++ + P+++L +Y M + + YT P +LKA L A E Q+H+
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA--- 203
+LG E++ + + I+ Y+ G+F+ A +FD PE SWN++I G + G+
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 204 ----------------------------KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
KEA+ +F ++ EPD+V++ + SAC L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE +H Y+ K++ + D+++ LIDMY KCG M+ A +VF I + +V +WT+
Sbjct: 261 GALEQGKWIHSYL--NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I GYA +G EA+ F M++ GI+PN +TF VL+AC + G V+EGK F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
++P HYGC+VDLLGRAGLL+EA+ ++ MP+K N VIWG L+ AC N+++GE +
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L ++P+ G YV +NI+A W++ R +MK + +AK+P S
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 218/377 (57%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + P +AL + M R P+ +T +LKA+ + IG Q+H+L V
Sbjct: 133 WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 192
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + S + +Y++ G + A VFD+ + SWNA+IAG ++ G + +
Sbjct: 193 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 252
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF +++ GFE T SV SA +G LE VH ++ +KS ++ + N+++DM
Sbjct: 253 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAFVGNTILDM 310
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +D+ +V +W SM+ +A GL EA+ F MR+ G+ N +TF
Sbjct: 311 YAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 370
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L+AC HGG V+EGK +F+MMK Y +EP HY +VDLLGRAGLL +A + MP
Sbjct: 371 LSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 429
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK +WG L+G+C N K+G++ A H+ EL+P G V+L NIYAS G W+ R
Sbjct: 430 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 489
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 490 VRKMMKATGVKKEPACS 506
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 9/297 (3%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
++ A + +L+ R +H+ + F ++ I LY K G AR+VFD P R
Sbjct: 70 LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARD 129
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW ++IAG +Q+ EA+ + G+ + F+P+ T S+ A G+ + Q+H
Sbjct: 130 MCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH- 188
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
VK D + ++L+DMY +CGRMD+A VF +++ N SW ++I G+A G
Sbjct: 189 -ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDG 247
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYG 365
L F M+ +G H T+ V SA G +++GK M+K+ ++ +
Sbjct: 248 ETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN-- 305
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
++D+ ++G + +AR + + + K +VV W ++ A ++G +G H +E+
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYG---LGREAVTHFEEM 358
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 221/380 (58%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++IR Y ++P++A+ Y+ M G+ PD T PI+LKA + A GR++ +
Sbjct: 728 WNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKACAAISAFNEGRKIQVDVM 787
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ N + ++ I Y AR++FDE R + SWNA+++ + ++
Sbjct: 788 KHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFG 847
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ GF+PD+ TMV + SAC LG+L VH V ++ + + +L+DM
Sbjct: 848 LFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQV--IEKGMVVNCRLGTALVDM 905
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + NV +W++MI+G A +G A EAL+ F M++S I PN+VTF
Sbjct: 906 YAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTF 965
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL AC H G V +G FF M+ V+ IEP HYG MVD+L RAG L+EA + MP
Sbjct: 966 LGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMP 1025
Query: 389 MKANVVIWGCLMGACEKFG---NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
++A+ V+W L+ AC G N +G+ V K L ELEP G +V+++N+YA G W++
Sbjct: 1026 VEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDK 1085
Query: 446 VERIRAVMKHRNLAKIPAYS 465
+R MK L K+ S
Sbjct: 1086 AANVRRTMKDTGLKKMAGES 1105
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN ++ E + +++ M +G PD T+ I+L A +L L GR
Sbjct: 822 SYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGR 881
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+HS + G+ N + + +Y+K G +A VF ER + +W+A+I GL+Q G
Sbjct: 882 WVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHG 941
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
AKEA+++F +K+ P+ VT + V AC G L +++ ++ + +M
Sbjct: 942 FAKEALELFPKMKQSSISPNYVTFLGVLCACSHAG---LVDDGYRFFHDMEYVHGIEPMM 998
Query: 262 LN--SLIDMYGKCGRMDLAY 279
++ +++D+ + GR+ AY
Sbjct: 999 IHYGAMVDILSRAGRLKEAY 1018
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 12/255 (4%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
FC S S G+ AR + + + ++ SWN +I + +EAI ++ ++
Sbjct: 701 FCAS------SPLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSL 754
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G PD +T + AC ++ ++ V +K + + N++I YG C R+
Sbjct: 755 GISPDKLTFPILLKACAAISAFNEGRKIQVDV--MKHGLDCNVYVQNTMIHFYGSCKRIR 812
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A ++F E+ V SW +++ N N++ F MR SG P+ T V +LSAC
Sbjct: 813 DARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFDPDETTMVILLSACS 872
Query: 337 HGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
G + G+ ++++ + R +VD+ + G + EA + M ++ NV
Sbjct: 873 ELGNLSFGRWVHSQVIEKGMVVNCRLGT--ALVDMYAKCGAVCEASLVFHRM-LERNVWT 929
Query: 396 WGCLMGACEKFGNVK 410
W ++ + G K
Sbjct: 930 WSAMILGLAQHGFAK 944
>gi|8778758|gb|AAF79766.1|AC009317_25 T30E16.32 [Arabidopsis thaliana]
Length = 695
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 173/483 (35%), Positives = 256/483 (53%), Gaps = 48/483 (9%)
Query: 27 KTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRT--------- 77
KT F + + SS H + + + C+++ QL Q++A +RT
Sbjct: 84 KTLVFSRIPNLKYGSSTAGNHH---QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATL 140
Query: 78 -------HMLHSYS---------------AAFHWNNIIRLYTR-LEAPKKALDIYIFM-S 113
+ S+S ++F WN +IR + ++A +Y M
Sbjct: 141 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 200
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
R PD +T P VLKA +F G+Q+H V+ G + + +G I LY G +
Sbjct: 201 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLD 260
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
ARKVFDE PER L SWN++I L + G A+ +F +++ FEPD TM SV SAC
Sbjct: 261 LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACA 319
Query: 234 SLGDLELALQVHKYVF-QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LG L L H ++ + D L+ NSLI+MY KCG + +A +VF + + +++S
Sbjct: 320 GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLAS 379
Query: 293 WTSMIVGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W +MI+G+A +G A EA++ F M + +RPN VTFVG+L AC H G V +G+ +F+M
Sbjct: 380 WNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDM 439
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NV 409
M Y IEP HYGC+VDL+ RAG + EA MV MPMK + VIW L+ AC K G +V
Sbjct: 440 MVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASV 499
Query: 410 KMGEWVAKHL---QELEPWSD----GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
++ E +A+++ +E S+ GAYV+LS +YAS W +V +R +M + K P
Sbjct: 500 ELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEP 559
Query: 463 AYS 465
S
Sbjct: 560 GCS 562
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 218/383 (56%), Gaps = 8/383 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F N ++R+ P AL ++ +R PD +T P +L+A +L +L G ++H+
Sbjct: 87 FSLNTVLRIAASSSRPSLALALH---ARRLAPPDTHTYPPLLQACARLLSLRHGERIHAE 143
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAGLSQDGRAK 204
A + GL + F ++ + LY G FE A +VFDE P ER L SWN+++ G + +GR
Sbjct: 144 AAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNGFAANGRPN 203
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
E + +F + F PD T+VSV +A +G L L +VH Y+ +V + S + N+
Sbjct: 204 EVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSH--VGNA 261
Query: 265 LIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
LID+Y KCG ++ A +VF E+ + V SWTS+IVG A NG EAL+ F M + P
Sbjct: 262 LIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAVNGFGKEALELFGIMEREKLVP 321
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T VGVL AC H G V +G +F MK Y I PR H GCMVDLLGRAG ++EA
Sbjct: 322 TEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAYDY 381
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ MP++ N V+W L+GAC +++GE L EL+P G YV+LSN+YA+ G W
Sbjct: 382 ILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRW 441
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
+V +R M + K P SL
Sbjct: 442 ADVHVLRKTMVKDGVRKNPGRSL 464
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 228/383 (59%), Gaps = 6/383 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALD-IYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQL 143
AF +N++IR A +Y M RAG P+ +TL LKA + A GRQL
Sbjct: 89 AFCYNSLIRALPAAGAAPAPALAVYRLMLRAGSPRPNTFTLAFALKACAAVPAPGEGRQL 148
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGR 202
H+ A+R GLE++ + ++G ++LY+K AR VFD P++ L +W+A+I G S+ G
Sbjct: 149 HAQALRQGLEASAYVQTGLLNLYAKCEQVALARTVFDGMAPDKSLVAWSAMINGYSRVGM 208
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA+ +F ++ G EPD+VTMV V SAC G L+L VH Y+ + D +
Sbjct: 209 VTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYID--RKGITVDLELS 266
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+LIDMY KCG ++ A VF + + + +W++MIVG+A +GL +AL F M E +R
Sbjct: 267 TALIDMYAKCGLIERARGVFDAMVEKDTKAWSAMIVGFAIHGLVEDALGLFSRMLELKVR 326
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN+VTF+GVLSAC H G V +G+ ++ +M+N+ I+P +YGCM+DLL R+GLL++A +
Sbjct: 327 PNNVTFIGVLSACAHSGLVDDGRRYWSIMQNL-GIKPSMENYGCMIDLLCRSGLLDDAYS 385
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
V MP+ N +IW L+ AC+ + + E +K L ELEP + YV+LSN+ AS
Sbjct: 386 FVIDMPISPNSIIWRTLLVACKSSNRIDIAESASKRLLELEPHNPENYVLLSNLCASNSQ 445
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+ V +R MK N+ + S
Sbjct: 446 WDRVSYLRKKMKDSNVTAVAGCS 468
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 225/379 (59%), Gaps = 6/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y R +A+++++ M V+P+ T VL A ++ L +G+ +H L
Sbjct: 174 WTGLISGYVRTGLFDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVY 230
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + +Y K +ARK+FDE P+R + SW +II+GL Q + K++++
Sbjct: 231 KRAFGIGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLE 290
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G EPD + + SV SAC SLG L+ V +Y+ + + D + +L+DM
Sbjct: 291 LFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYI--ERQGIEWDIHIGTALVDM 348
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +++A +F I N+ +W +++ G A +G +EAL F M +GIRPN VTF
Sbjct: 349 YAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTF 408
Query: 329 VGVLSACVHGGKVQEGK-HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +L+AC H G V EG+ +F++M+ + PR HYGCM+DLL RAGLL+EA + M
Sbjct: 409 LAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNM 468
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ +V+IWG L+ AC+ GNV++ + + HL EL+ G YV+LSNIYA+ W++V
Sbjct: 469 PLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVT 528
Query: 448 RIRAVMKHRNLAKIPAYSL 466
R+R +MK + + K P S+
Sbjct: 529 RVRRLMKDKGIRKFPGSSV 547
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 40/395 (10%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHS------------------------------YSA 85
+ +C + L QI+AH+I + +LH +
Sbjct: 10 NSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQTDLHVG 69
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+N +I Y PK A +Y + G +PD YT P+VLKA + ++ G Q+H
Sbjct: 70 TLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHG 129
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+AV++G + + ++ + YS G + A +VFDE R + SW +I+G + G E
Sbjct: 130 VAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDE 189
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
AI++F+ K P+ T VSV ACG +G L + VH V+ K ++ N+L
Sbjct: 190 AINLFL---KMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVY--KRAFGIGLVVGNAL 244
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KC + A K+F E+ ++ SWTS+I G ++L+ F+ M+ SG+ P+
Sbjct: 245 VDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDR 304
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+ VLSAC G + G+ E ++ IE +VD+ + G +E A +
Sbjct: 305 IILTSVLSACASLGALDYGRWVQEYIER-QGIEWDIHIGTALVDMYAKCGCIEMALHIFN 363
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
G+P + N+ W L+G G+ G KH +
Sbjct: 364 GIPNR-NIFTWNALLGGLAMHGH---GHEALKHFE 394
>gi|110737061|dbj|BAF00484.1| hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 256/482 (53%), Gaps = 46/482 (9%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRT---------- 77
H H+ A+S T + + + + C+++ QL Q++A +RT
Sbjct: 17 VHPLSPHIP-PASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLF 75
Query: 78 ------HMLHSYS---------------AAFHWNNIIRLYTR-LEAPKKALDIYIFM-SR 114
+ S+S ++F WN +IR + ++A +Y M R
Sbjct: 76 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 135
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
PD +T P VLKA +F G+Q+H V+ G + + +G I LY G +
Sbjct: 136 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 195
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARKVFDE PER L SWN++I L + G A+ +F +++ FEPD TM SV SAC
Sbjct: 196 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAG 254
Query: 235 LGDLELALQVHKYVF-QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L L H ++ + D L+ NSLI+MY KCG + +A +VF + + +++SW
Sbjct: 255 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 314
Query: 294 TSMIVGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+MI+G+A +G A EA++ F M + +RPN VTFVG+L AC H G V +G+ +F+MM
Sbjct: 315 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 374
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVK 410
Y IEP HYGC+VDL+ RAG + EA MV MPMK + VIW L+ AC K G +V+
Sbjct: 375 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 434
Query: 411 MGEWVAKHL---QELEPWSD----GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ E +A+++ +E S+ GAYV+LS +YAS W +V +R +M + K P
Sbjct: 435 LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPG 494
Query: 464 YS 465
S
Sbjct: 495 CS 496
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/407 (38%), Positives = 236/407 (57%), Gaps = 6/407 (1%)
Query: 62 TNLLQLNQIYAHIIRTHMLH---SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
T L+ L I + H+L S F WN +IR Y + A+ +Y M G++
Sbjct: 40 TKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLV 99
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD +T P VLKA L A+E G+++H +R GLES+ F + I +Y+K G E AR+V
Sbjct: 100 PDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQV 159
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD+ ER + WN+++A SQ+G+ E++ + + G +P + T V +A G L
Sbjct: 160 FDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLL 219
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++H Y + + +S+ + +L+DMY K G +++A +F +++ V SW +MI
Sbjct: 220 PQGKELHGYSW--RHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMIT 277
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA +G ANEALD F M+ + P+H+TFVGVL+AC HGG + EGK F M + + I
Sbjct: 278 GYAMHGHANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIW 336
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HY CM+DLLG G LEEA ++ M ++ + +WG L+ +C+ GNV+MGE +
Sbjct: 337 PTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEK 396
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L ELEP G YV+LSN+YA G W+ V R+R +M ++ L K A S
Sbjct: 397 LVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGLKKSIACS 443
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 20/273 (7%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
A+E G+QLH+ ++G+ N + ++LY A +FD +R L WN +I
Sbjct: 16 AIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIR 75
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G + +G + AI ++ ++ G PD T V AC +L +E ++HK V ++S
Sbjct: 76 GYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDV--IRSGL 133
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+SD + +LIDMY KCG ++ A +VF +ID+ +V W SM+ Y+ NG +E+L
Sbjct: 134 ESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRV 193
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGK--------HFFEMMKNVYQIEPRFAHYGCM 367
M +G++P TFV ++A G + +GK H FE V +
Sbjct: 194 MAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT---------AL 244
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+D+ ++G + AR++ E + K VV W ++
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEK-RVVSWNAMI 276
>gi|15218900|ref|NP_176180.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806498|sp|Q0WQW5.2|PPR85_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g59720, mitochondrial; Flags: Precursor
gi|332195486|gb|AEE33607.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 256/482 (53%), Gaps = 46/482 (9%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRT---------- 77
H H+ A+S T + + + + C+++ QL Q++A +RT
Sbjct: 26 VHPLSPHIP-PASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLF 84
Query: 78 ------HMLHSYS---------------AAFHWNNIIRLYTR-LEAPKKALDIYIFM-SR 114
+ S+S ++F WN +IR + ++A +Y M R
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
PD +T P VLKA +F G+Q+H V+ G + + +G I LY G +
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 204
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARKVFDE PER L SWN++I L + G A+ +F +++ FEPD TM SV SAC
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAG 263
Query: 235 LGDLELALQVHKYVF-QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L L H ++ + D L+ NSLI+MY KCG + +A +VF + + +++SW
Sbjct: 264 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 323
Query: 294 TSMIVGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+MI+G+A +G A EA++ F M + +RPN VTFVG+L AC H G V +G+ +F+MM
Sbjct: 324 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVK 410
Y IEP HYGC+VDL+ RAG + EA MV MPMK + VIW L+ AC K G +V+
Sbjct: 384 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Query: 411 MGEWVAKHL---QELEPWSD----GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ E +A+++ +E S+ GAYV+LS +YAS W +V +R +M + K P
Sbjct: 444 LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPG 503
Query: 464 YS 465
S
Sbjct: 504 CS 505
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 223/381 (58%), Gaps = 3/381 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F ++++I L ++ P+++L Y M A + YT V+K+S L A IG +H
Sbjct: 83 TFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHC 142
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
G + + ++ +S Y+K+G ARKVFD+ PE+ + +WN++I+G Q+G KE
Sbjct: 143 HVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKE 202
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F ++ G +PD T VS+ SAC +G + L VH+Y+ ++ + ++ +L
Sbjct: 203 AVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYI--ARNCFDLNVVLGTAL 260
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
++MY +CG + A +VF +++ N+ +WT+MI GY +G ++A++ F+ M G RPN+
Sbjct: 261 MNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNN 320
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTFV VLSAC H G V EG+ F MK Y + P H CMVD+LGRAG L EA ++
Sbjct: 321 VTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIK 380
Query: 386 GM-PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
P + +W ++GAC+ N +G VA+HL +EP + G YV+LSNIYA G +
Sbjct: 381 NTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMD 440
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
VE+IR +M L K YS
Sbjct: 441 RVEKIRNIMIRNRLKKEVGYS 461
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 241/473 (50%), Gaps = 64/473 (13%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHS------------------------------YSA 85
++L C NL Q+ QI+ H++R + S +
Sbjct: 55 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRN 114
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +IR YT +A+ +Y M + + P +T +LKA + L +GRQ H+
Sbjct: 115 PFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHA 174
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA---------- 195
RL + + I +Y K G ARKVFDE PER + SW +IA
Sbjct: 175 QTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMES 234
Query: 196 ---------------------GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
G +Q+ + +EA++ F ++K G D+VT+ SAC
Sbjct: 235 AADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 294
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG + A + + + Q SD +++ S LIDMY KCG ++ A VF ++ NV S+
Sbjct: 295 LGASKYADRAVQ-IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSY 353
Query: 294 TSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+SMI+G A +G A EALD FHYM ++ I+PN VTFVG L+AC H G V +G+ F M
Sbjct: 354 SSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMY 413
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ +EP HY CMVDLLGRAG L+EA +++ M ++ + +WG L+GAC N +
Sbjct: 414 QTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIA 473
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E A+HL ELEP G Y++LSN+Y+S G W V +R ++K + L K PA S
Sbjct: 474 EIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVS 526
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/389 (39%), Positives = 214/389 (55%), Gaps = 36/389 (9%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R G LPD Y+ P VLKA +L L GR++HS ++LG+ + F ++ IS +S G
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 172 FEKAR---------------------------------KVFDENPERKLGSWNAIIAGLS 198
E AR KVFD P R W ++IAG +
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q KEAI++F ++ GF D T+ V SACG G L +H Y ++ + D
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYC--ERNSIEMD 178
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
N+LI MY KCG + A ++F + QP++ SW+++I G A NG +++AL F M
Sbjct: 179 LNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEM 238
Query: 319 -SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
S IRPN +TF+GVL AC HGG V +G ++F M +Y + P HYGCMVDLLGRA LL
Sbjct: 239 ISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL 298
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EA + +P++ +VVIW L+ AC GN+++ E+ AK ++ELEP GA V+LSN+Y
Sbjct: 299 VEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVY 358
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
AS W +V+R+R M + + K P S
Sbjct: 359 ASASRWGDVKRVRKDMATQRIKKQPGCSF 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + K+A++++ M G D T+ VL A AL GR +H
Sbjct: 112 WTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCE 171
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +E + + I +YSK GD +KA ++F + + SW+A+I+GL+ +G + +A+
Sbjct: 172 RNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALH 231
Query: 209 MFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML---NS 264
+F ++ P+++T + V AC G ++ L Y F ++ + T +
Sbjct: 232 LFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGL----YYFNAMTQIYNLTPGIEHYGC 287
Query: 265 LIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
++D+ G+ + A K + QP+V W S++ +G
Sbjct: 288 MVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHG 328
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 219/372 (58%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + P+KALD+Y+ M+ +G+ PD +T+ +L A ++ +L G ++H A+
Sbjct: 278 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 337
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + F +SLY G A+ +FD R L SWN +IAG SQ+G EAI+
Sbjct: 338 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 397
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +P ++ ++ V AC L L L ++H F +K+ D + +S+IDM
Sbjct: 398 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH--CFALKAHLTEDIFVSSSIIDM 455
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + L+ ++F + + +V+SW +I GY +G EAL+ F M G++P+ TF
Sbjct: 456 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 515
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G+L AC H G V++G +F M N++ IEP+ HY C+VD+LGRAG +++A ++E MP
Sbjct: 516 TGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 575
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ IW L+ +C GN+ +GE VA L ELEP YV++SN++A G W++V R
Sbjct: 576 GDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRR 635
Query: 449 IRAVMKHRNLAK 460
+R MK L K
Sbjct: 636 VRGRMKDIGLQK 647
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 186/372 (50%), Gaps = 17/372 (4%)
Query: 32 RKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNN 91
R H +SA++ F + +I+ T S C + ++ + R ++ F WN
Sbjct: 126 RLHEMVSASTQFCNDFVLNTRII-TMYSMCGSPSDSRMVFDKLRRKNL-------FQWNA 177
Query: 92 IIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
I+ YTR E + A+ I+ +S PD +TLP V+KA L L +G+ +H +A ++
Sbjct: 178 IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKM 237
Query: 151 GLESNEFCESGFISLYSKAGDFEKA-RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
L S+ F + I++Y K G E+A ++VFD + + SWNA++ G +Q+ ++A+D+
Sbjct: 238 DLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDL 297
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
++ + G +PD T+ S+ AC + L ++H F +++ D + SL+ +Y
Sbjct: 298 YLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG--FALRNGLAVDPFIGISLLSLY 355
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
CG+ A +F ++ ++ SW MI GY+ NGL +EA++ F M GI+P + +
Sbjct: 356 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 415
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
V AC ++ GK + E F ++D+ + G + ++ + + +
Sbjct: 416 CVCGACSQLSALRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDRLRE 474
Query: 390 KA----NVVIWG 397
K NV+I G
Sbjct: 475 KDVASWNVIIAG 486
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 135/269 (50%), Gaps = 19/269 (7%)
Query: 103 KKALDIYIFMSRAGVLPDCY---TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC- 158
K+ALD S VL + ++L+A Q +E+GR+LH + S +FC
Sbjct: 84 KEALDFLQRESDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVS----ASTQFCN 139
Query: 159 ----ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
+ I++YS G +R VFD+ + L WNAI++ +++ ++A+ +F L
Sbjct: 140 DFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELI 199
Query: 215 KCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
+PD+ T+ V AC L DL L +H K SD + N+LI MYGKCG
Sbjct: 200 SVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHG--MATKMDLVSDVFVGNALIAMYGKCG 257
Query: 274 RMDLAYK-VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
++ A K VF +D VSSW +++ GYA N +ALD + M +SG+ P+ T +L
Sbjct: 258 LVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLL 317
Query: 333 SACVHGGKVQEGK--HFFEMMKNVYQIEP 359
AC + G+ H F ++N ++P
Sbjct: 318 LACSRMKSLHYGEEIHGFA-LRNGLAVDP 345
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 240/451 (53%), Gaps = 38/451 (8%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P+ I + +K N + +I +S W + + Y R +A +
Sbjct: 21 PSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEF 80
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALE---IGRQLHSLAVRLGLESNE-FCESGFISL 165
M AGV P+ T I L ++C F E LH A + GL++ + I +
Sbjct: 81 TRMRLAGVEPNHITF-ITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 166 YSKAGDFEKARKVF-------------------------------DENPERKLGSWNAII 194
YSK ARKVF DE P R SW A+I
Sbjct: 140 YSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALI 199
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
GL + G +++A++ F +++ G D V++++V +AC LG L L L VH++V + +
Sbjct: 200 NGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFV--MPQE 257
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
K + + NSLIDMY +CG ++ A +VF ++ + + SW S+IVG+A NG A+E+L+ F+
Sbjct: 258 FKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFY 317
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M++ G +P+ V++ G L+AC H G V +G F+ MK+V++I PR HYGC+VDL GRA
Sbjct: 318 AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRA 377
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G LE+A M+E MPMK N V+ G L+ AC G+V + E + KHL +L+P D YV+LS
Sbjct: 378 GRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLS 437
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NIYA+ G W+ +R MK R + K P YS
Sbjct: 438 NIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
>gi|255540011|ref|XP_002511070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550185|gb|EEF51672.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 551
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 222/407 (54%), Gaps = 33/407 (8%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F +N IIRL+T + AL ++ M R V PD ++ P LKA L L + + LH
Sbjct: 101 STFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAHLRVLSLAQCLH 160
Query: 145 SLAVRLGLESNEFCESGFISLYS-------------------------------KAGDFE 173
S + G S+ + + I +YS KAG+F
Sbjct: 161 SQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNALVDGFVKAGEFV 220
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
KAR++FD P R SW ++IAG +Q EAI +F + EPD++ +VS SAC
Sbjct: 221 KAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDNIALVSALSACA 280
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG+LE Q+H Y+ K++ ++D+ + L+D Y K G +D A KVF ++ +W
Sbjct: 281 QLGELEKGKQIHDYI--KKNRIQADSFLSTGLVDFYAKSGCIDTAIKVFELSPDKSLITW 338
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+M++G A +G ++ L+ F M E+GI+P+ ++F+GVL C HGG V E K F+ M++
Sbjct: 339 NAMLIGIAMHGNSHLLLNYFSRMMEAGIKPDGISFLGVLVGCSHGGLVDEAKKLFDEMES 398
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+Y + HYGCM DLL RAGL++EA + +G+PM ++ +W L+G C GN+++ E
Sbjct: 399 IYGVRRELKHYGCMADLLARAGLIKEAVELTKGLPMGGDIFVWSGLLGGCRIHGNIEIAE 458
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
AK + EL+P G Y +L+N+YA+ WE+V +IR M K
Sbjct: 459 QAAKQVMELKPEDGGVYSILANVYANADRWEDVVKIRRSMSSNRAVK 505
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 31/263 (11%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A FD +N II + A A+ F+ +++ PD + AC
Sbjct: 90 AVSTFDNIQNPSTFCYNVIIRLHTLHSSALSALHFFLQMRRFSVPPDFHSYPFALKACAH 149
Query: 235 LGDLELALQVHKYVFQ-----------------------------VKSKQKSDTLMLNSL 265
L L LA +H VF+ D + N+L
Sbjct: 150 LRVLSLAQCLHSQVFKFGFVSDLYVINSLIHVYSLFDCLNYACQVFDESSDRDVVSYNAL 209
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+D + K G A ++F + + SW S+I GYA NEA+ F M + P++
Sbjct: 210 VDGFVKAGEFVKAREIFDLMPMRDSVSWGSLIAGYAQGSYCNEAIGLFDLMMGLKLEPDN 269
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+ V LSAC G++++GK + +K F G +VD ++G ++ A + E
Sbjct: 270 IALVSALSACAQLGELEKGKQIHDYIKKNRIQADSFLSTG-LVDFYAKSGCIDTAIKVFE 328
Query: 386 GMPMKANVVIWGCLMGACEKFGN 408
P K+ ++ W ++ GN
Sbjct: 329 LSPDKS-LITWNAMLIGIAMHGN 350
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 224/385 (58%), Gaps = 10/385 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + P +A+ +Y M V P+ T+ VL A + L GR +H
Sbjct: 174 WTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTG 233
Query: 149 RLGLES-------NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++GL+ N + + +Y+K G + AR +F++ P R L +WN++I +Q G
Sbjct: 234 QMGLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYG 293
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A EA+D+F ++ GF+PD T + V AC LG L +H YV K+ DT +
Sbjct: 294 QANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYV--SKTNLTDDTAI 351
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SG 320
+L+DMY K G + A +VF E+ + +V++WTS+I+G A +G EAL F M+E +
Sbjct: 352 GTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTA 411
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+ +T++GVLSAC H GKV++GK+ F MKNV+ IEP HYGCMVDLL RAG L EA
Sbjct: 412 LIPDEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEA 471
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+VE MP++ N IW L+ C+ + N+ + + V + ++ELE G YV+LSNIYA
Sbjct: 472 ERLVEKMPVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGA 531
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
WEEV+ R +MK R + K +S
Sbjct: 532 CRWEEVKMARELMKERKIQKSLGHS 556
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 173/340 (50%), Gaps = 7/340 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ WN++I+ Y+ E+P +AL +Y M + G PD +T P VLKA + +G+ +H+
Sbjct: 71 YIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNC 130
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G E + + + + +Y+ GD E A KVFD+ P+ + +W ++IAG + EA
Sbjct: 131 IVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEA 190
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV-----KSKQKSDTLM 261
+ ++ ++ P+++TMV+V AC DL VH Q+ +S + ++
Sbjct: 191 VRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVIL 250
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+++DMY KCG + A +F ++ N+ +W SMI Y G ANEALD F MR +G
Sbjct: 251 ATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIAGF 310
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P+ TF+ V+ AC H G + G+ + + A +VD+ ++G E A+
Sbjct: 311 DPDKATFLCVIGACAHLGALVSGQALHAYVSKT-NLTDDTAIGTALVDMYAKSGDAERAQ 369
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
+ + K +V W L+ G+ + K +QE
Sbjct: 370 QVFSEL-QKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQE 408
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 11/275 (4%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
++LH L + + + S + YS +G+ A+ VF++ L WN++I G S
Sbjct: 22 KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRPSLYIWNSMIKGYS 81
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
EA+ M+ +++ G+ PD T V AC + L VH + VK+ + D
Sbjct: 82 ISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVHNCI--VKTGFEVD 139
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+L+ MY CG M+ A KVF +I + NV +WTS+I G +N +EA+ + M
Sbjct: 140 VYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMEL 199
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFF----EMMKNVYQIEPRFAHY--GCMVDLLG 372
+ PN +T V VL AC + G+ +M + +Q F +VD+
Sbjct: 200 WSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYA 259
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ G L+ AR + MP + N+V W ++GA ++G
Sbjct: 260 KCGSLKTARDLFNKMPHR-NLVAWNSMIGAYNQYG 293
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM--YGKCGRMDLAYKV 281
+++S+ C ++ +L+ ++H + Q D + L+ L+D Y G ++ A V
Sbjct: 7 SILSLLEKCKTMAELK---RLHGLMITTSVIQ--DVIPLSRLVDFCAYSDSGNLNYAKSV 61
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC--VHGG 339
F +ID+P++ W SMI GY+ + +EAL + MR+ G P+H TF VL AC V+G
Sbjct: 62 FNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGY 121
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ + H ++K ++++ A ++ + G +E A + + +P K NVV W L
Sbjct: 122 NLGQCVHNC-IVKTGFEVDVYAA--TALLQMYAACGDMEAALKVFDDIP-KWNVVAWTSL 177
Query: 400 MGAC 403
+ C
Sbjct: 178 IAGC 181
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 220/380 (57%), Gaps = 2/380 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN II + + E ++ L +++ M R+ + PD YT V+KA AL G ++H
Sbjct: 438 AVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHG 497
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G+ + F S I +Y K G +A K+ + ER SWN+II+G S + + +
Sbjct: 498 RVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGEN 557
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F + + G PD+ T +V C +L +EL Q+H + +K + SD + +++
Sbjct: 558 ALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI--LKLQLHSDVYIASTI 615
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG M + +F + + + +W++MI YA +GL +A+ F M+ ++PNH
Sbjct: 616 VDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNH 675
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
F+ VL AC H G V +G H+F M++ Y ++P+ HY CMVDLLGR+G + EA ++E
Sbjct: 676 TIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP +A+ VIW L+G C GNV++ E A L +L+P AYV+LSN+YA G+W E
Sbjct: 736 SMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGE 795
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +IR+ MK+ L K P S
Sbjct: 796 VAKIRSFMKNYKLKKEPGCS 815
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 165/334 (49%), Gaps = 7/334 (2%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +I Y R + +AL+I+ + ++ + D +L L A + G QLH LAV+
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
GL+ N + + +Y+K G +A +FD+ + SWNAIIA Q+ +E + +
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F+ + + EPDD T SV AC L ++VH V +KS D + +++IDMY
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRV--IKSGMGLDWFVGSAIIDMY 518
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG + A K+ +++ SW S+I G+++ AL F M + G+ P++ T+
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYA 578
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
VL C + V+ GK + + Q+ +VD+ + G ++++R M E P
Sbjct: 579 TVLDICANLATVELGKQIHGQILKL-QLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP- 636
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
K + V W ++ A G +GE K +E++
Sbjct: 637 KRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQ 667
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 26/333 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ Y + +K+++I+ M + D T +VLKA + +G Q+H LA+
Sbjct: 138 WNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAI 197
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G +S+ + + +YS + A +F E PER W+A+IAG ++ R E +
Sbjct: 198 QMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK 257
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + G T S +C L EL Q+H Y +K+ D ++ + +DM
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYA--LKTNFGYDNIVGTATLDM 315
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC RM A KVF P S ++IVGYA EAL+ F +++S + + ++
Sbjct: 316 YAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G L+AC +HG V+ G F + N ++D+ + G L
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT------------ILDMYAKCGAL 423
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
EA + + M +K + V W ++ A E+ +V+
Sbjct: 424 MEACLIFDDMEIK-DAVSWNAIIAAHEQNEHVE 455
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+ G+ E A+ +FD PER + SWN++++ Q+G +++I++F ++ + D T
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATF 173
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V AC + D L LQVH Q+ SD + +L+DMY C ++D A+ +F E+
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGF--DSDVVTGTALVDMYSTCKKLDHAFNIFCEM 231
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ N W+++I GY N E L + M + G+ + TF +C + G
Sbjct: 232 PERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGT 291
Query: 346 HFFEMMKNVYQIEPRFAHYGCM----VDLLGRAGLLEEARAMVEGMP 388
+ Y ++ F + + +D+ + + +AR + P
Sbjct: 292 QL-----HAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 246 KYVFQVKSKQ-KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
Y F V K + D + N++I Y G M+ A +F + + +V SW SM+ Y NG
Sbjct: 90 NYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNG 149
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
++++ F MR I+ ++ TF VL AC
Sbjct: 150 FHRKSIEIFTKMRLLEIQHDYATFAVVLKACT 181
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 218/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II + E+ K L + M R+ + PD +T VLKA A G ++H +
Sbjct: 428 WNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRII 487
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G+ F S + +YSK G E+A K+ E+ + SWNAII+G S +++++
Sbjct: 488 KSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQR 547
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + + G EPD+ T +V C +L + L Q+H + +K + SD + ++L+DM
Sbjct: 548 FFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQM--IKLELLSDVYITSTLVDM 605
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG M + +F + + + +W +MI G+A +GL EAL+ F +M I+PNH TF
Sbjct: 606 YSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATF 665
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL AC H G ++G +F+ M ++Y +EP+ HY CMVD+LGR+G +EEA +++ MP
Sbjct: 666 VSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMP 725
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+A+ +IW L+ C+ GNV++ E A L +L+P AY +LSNIYA G+W++V +
Sbjct: 726 FEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSK 785
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ NL K P S
Sbjct: 786 IRQTMRSHNLKKEPGCS 802
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 157/319 (49%), Gaps = 8/319 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +K++ +++ M GV+ D TL + LK L +G Q+H +AV
Sbjct: 125 WNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAV 184
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G + + S + +Y+K E + VF E P++ SW+A IAG Q+ + +
Sbjct: 185 QMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLK 244
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G T SV +C L L Q+H + +K+ SD ++ + +DM
Sbjct: 245 LFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHA--LKTDFGSDVIVGTATLDM 302
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC M AYK+F + N+ S+ +MI+GYA N +A F ++++ + V+
Sbjct: 303 YAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSL 362
Query: 329 VGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
G LSA EG H + N + ++D+ G+ G L EA + +
Sbjct: 363 SGALSAAAVIKGHSEGLQLHGLAIKSN---LSSNICVANAILDMYGKCGALVEASGLFDE 419
Query: 387 MPMKANVVIWGCLMGACEK 405
M ++ + V W ++ ACE+
Sbjct: 420 MEIR-DPVSWNAIITACEQ 437
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 191/427 (44%), Gaps = 46/427 (10%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N+ ++++ ++ H L SY+A +I Y R E +A +++ + +
Sbjct: 304 AKCDNMSDAYKLFS-LLPDHNLQSYNA------MIIGYARNEQGFQAFKLFLQLQKNSFS 356
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D +L L A+ + G QLH LA++ L SN + + +Y K G +A +
Sbjct: 357 FDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGL 416
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE R SWNAII Q+ + + F + + EPD+ T SV AC
Sbjct: 417 FDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAF 476
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++VH + +KS + ++L+DMY KCG M+ A K+ + +++ + SW ++I
Sbjct: 477 SNGMEVHGRI--IKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIIS 534
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF------FEMMK 352
G++ + ++ F +M E G+ P++ T+ VL C + V GK E++
Sbjct: 535 GFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLS 594
Query: 353 NVY---QIEPRFAHYGCMVDLL-------------------GRA--GLLEEARAMVEGM- 387
+VY + ++ G M D L G A GL EEA + E M
Sbjct: 595 DVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHML 654
Query: 388 --PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE---LEPWSDGAYVVLSNIYASRGL 442
+K N + ++ AC GN K G + + + LEP + Y + +I G
Sbjct: 655 HENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLE-HYSCMVDILGRSGQ 713
Query: 443 WEEVERI 449
EE R+
Sbjct: 714 VEEALRL 720
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 99/232 (42%), Gaps = 34/232 (14%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL-------- 187
AL+ G++ H+ + G F + I +Y K E A KVF+E P+R +
Sbjct: 39 ALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDIVSWNTMVF 98
Query: 188 ------------------------GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
SWN++I+G Q+G +++I +F+ ++ G D
Sbjct: 99 GCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHT 158
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ C L D L +Q+H Q+ D + ++L+DMY KC ++ + VF
Sbjct: 159 TLAVSLKICSLLEDQVLGIQIHGIAVQMGFDY--DVVTGSALVDMYAKCNSLEDSLDVFS 216
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
E+ N SW++ I G N L F M+ GI + T+ V +C
Sbjct: 217 ELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC 268
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 243/473 (51%), Gaps = 62/473 (13%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTH--------------------MLHSYSAAFH----- 88
+ + + C L L Q++A II H L FH
Sbjct: 70 ILSLFNPCKTLRHLKQVHAQIITHHNSPFQLSALASLSALSPFPTFLAYAKTIFHHLQNP 129
Query: 89 ----WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+N++IR + + P +AL +Y M ++G+ PD T P V+KA + G +H
Sbjct: 130 PPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVH 189
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD---- 200
+ V+ G E + + S I LY+ D A+++F+ R + SWNA+I G +
Sbjct: 190 THVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMG 249
Query: 201 ---------------------------GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
G+ EA+ +F ++ G +P + T+VS+ SAC
Sbjct: 250 HARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACA 309
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L+ L +H Y+ ++ + ++++ +L+DMY KCG++ LA +VF ++ +V +W
Sbjct: 310 HLGALDKGLHLHTYIND--NRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAW 367
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I G A +G EA F M+E+G+ PN +TFV +LSAC H G V EG+ + M +
Sbjct: 368 NTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSS 427
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGC++DLL RAG LEEA ++ MPM+ N G L+G C GN ++GE
Sbjct: 428 SYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGE 487
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V K L L+P G Y++LSNIYA+ W++ ++R +MK ++K+P S+
Sbjct: 488 MVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSV 540
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 208/352 (59%), Gaps = 2/352 (0%)
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
R G PD YTLP V++A L L++GR +H + + GL+ + F + + +Y K + E
Sbjct: 829 RCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIE 888
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR +FD+ ER L +W +I G ++ G A E++ +F +++ G PD V MV+V AC
Sbjct: 889 DARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACA 948
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG + A + Y+ + K + D ++ ++IDM+ KCG ++ A ++F +++ NV SW
Sbjct: 949 KLGAMHKARTIDDYI--QRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 1006
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI Y +G +ALD F M SGI PN +T V +L AC H G V+EG FF M
Sbjct: 1007 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE 1066
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y + HY C+VDLLGRAG L+EA ++ M + + +WG +GAC +V + E
Sbjct: 1067 DYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAE 1126
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L EL+P + G Y++LSNIYA+ G WE+V +IR +M R L KIP ++
Sbjct: 1127 KAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWT 1178
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/445 (33%), Positives = 234/445 (52%), Gaps = 36/445 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 111
K + L C NL Q+ Q++A ML + A N +I Y+ A A ++
Sbjct: 63 KFYISALVNCRNLTQVRQVHAQASVHGMLENIVVA---NKLIYFYSYYRALDDAYGLFDG 119
Query: 112 MS-------------------------------RAGVLPDCYTLPIVLKASCQLFALEIG 140
M R G PD YTLP V++A L L++G
Sbjct: 120 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMG 179
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R +H + + GL+ + F + + +Y K + E AR +FD+ ER L +W +I G ++
Sbjct: 180 RLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC 239
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G+A E++ +F +++ G PD V MV+V AC LG + A + Y+ + K + D +
Sbjct: 240 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYI--QRKKFQLDVI 297
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++IDMY KCG ++ A ++F +++ NV SW++MI Y +G +ALD F M SG
Sbjct: 298 LGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSG 357
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+ +T +L AC H G V+EG FF M Y + HY C+VDLLGRAG L+EA
Sbjct: 358 MLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEA 417
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+++ M ++ + +WG +GAC +V + E A L EL+ + G YV+LSNIYA+
Sbjct: 418 LKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANA 477
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G WE+V +IR +M R L K P ++
Sbjct: 478 GRWEDVAKIRDLMSQRRLKKTPGWT 502
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 131/263 (49%), Gaps = 6/263 (2%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H A G+ N + + YS + A +FD R SW+ ++ G ++
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G F L +CG PD+ T+ V AC L +L++ +H V+ K D
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY--KFGLDLDHF 872
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +L+DMYGKC ++ A +F ++ + ++ +WT MI GYA G ANE+L F MRE G
Sbjct: 873 VCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 932
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+ P+ V V V+ AC G + + + + + + +Q++ M+D+ + G +E
Sbjct: 933 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG--TAMIDMHAKCGCVES 990
Query: 380 ARAMVEGMPMKANVVIWGCLMGA 402
AR + + M K NV+ W ++ A
Sbjct: 991 AREIFDRMEEK-NVISWSAMIAA 1012
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y ++L ++ M GV+PD + V+ A +L A+ R +
Sbjct: 905 WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 964
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + + + I +++K G E AR++FD E+ + SW+A+IA G+ ++A+D
Sbjct: 965 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 1024
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+ +T+VS+ AC G +E L+ +++ S + D ++D+
Sbjct: 1025 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYS-VRXDVKHYTCVVDL 1083
Query: 269 YGKCGRMDLAYKV 281
G+ GR+D A K+
Sbjct: 1084 LGRAGRLDEALKL 1096
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/476 (33%), Positives = 246/476 (51%), Gaps = 66/476 (13%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLH---------SYSA------------------- 85
+ LS C L L QI+A I T + S++A
Sbjct: 38 ILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRK 97
Query: 86 --AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQ 142
F N +IR Y P A+ Y M+ + V+ PD +T P++LKA ++ +L +G
Sbjct: 98 PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157
Query: 143 LHSLAVRLGLESNEFCESGFISLYS-------------------------------KAGD 171
+HS +LG S + + +Y+ K G
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGV 217
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
F+ AR++F+ P+R + SW+ +I G Q+ R KE + +F + EP++ +V+ SA
Sbjct: 218 FKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSA 277
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNV 290
C LG +E + +Y+ + K T+ L + LIDMY KCG ++ A +VF ++ + NV
Sbjct: 278 CAHLGAMEQGQWIERYM---ERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNV 334
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W++MI G A NG +AL+ F M G++PN VTF+G+L+AC H V EG FF
Sbjct: 335 LAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHS 394
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M ++Y ++P H+ CMVDL GRAG+L++A+ +++ MP K N IWG L+ AC G+ +
Sbjct: 395 MTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTE 454
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+GE V K L EL+P G YV+LSNIYA+ G W+ V +R +M+ R ++K P S
Sbjct: 455 LGEQVGKRLLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSF 510
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 246/418 (58%), Gaps = 19/418 (4%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY---IFM--- 112
SKC L ++ I R +++ W ++I Y + + +AL ++ +F
Sbjct: 128 SKCGKLSNARVLFDEIPRRNIVT-------WTSLITGYVQNDDAHEALMVFKEFLFEKSE 180
Query: 113 ---SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
G D + VL A ++ + +H +A+++GL+ E+ + Y+K
Sbjct: 181 GNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKC 240
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSV 228
G+ +RKVFD+ E+ + SWN++IA +Q+G + +A ++F G LK G + ++VT+ ++
Sbjct: 241 GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTL 300
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
AC G L + + +H V +K ++ +M S+IDMY KCG+ ++A F + +
Sbjct: 301 LLACAHEGALRVGMCLHDQV--IKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEK 358
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
NV SWT+MI GY +G A EALD F+ M +G++PN++TF+ VL+AC H G ++EG +F
Sbjct: 359 NVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWF 418
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
M + Y +EP HYGCMVDLLGRAG ++EA +++ M ++ + V+WG L+ AC +
Sbjct: 419 NAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKD 478
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V++ E A+ L +L+P + G YV+L+NIYA G W++VER+R ++K R L K P YSL
Sbjct: 479 VELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSL 536
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 163/328 (49%), Gaps = 18/328 (5%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ WN++I R ++L + +M + + P+ T P +K+ LF L G+Q H
Sbjct: 48 YSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQ 107
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A+ G ES+ F S I +YSK G AR +FDE P R + +W ++I G Q+ A EA
Sbjct: 108 ALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEA 167
Query: 207 IDMFIGL---------KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ +F ++ G D V M+SV SAC + + ++ VH +V
Sbjct: 168 LMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKV----GL 223
Query: 258 DTLM--LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D +M N+L+D Y KCG + L+ KVF ++ + +V SW SMI YA NGL+ +A + FH
Sbjct: 224 DKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHG 283
Query: 316 M-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M + G + N VT +L AC H G ++ G + + + + ++D+ +
Sbjct: 284 MLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS-IIDMYCKC 342
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGA 402
G E AR +GM K NV W ++
Sbjct: 343 GQAEMARNAFDGMKEK-NVRSWTAMIAG 369
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 19/167 (11%)
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
SL L ++ ++HK F + + L +L + Y D+ +V SW
Sbjct: 8 SLQLLTISFKIHKNHFSTTAAATNTNL--TTLFNKY---------------FDRTDVYSW 50
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+I A G + E+L F +MR+ I+PN TF + +C + GK +
Sbjct: 51 NSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQAL- 109
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
V+ E ++D+ + G L AR + + +P + N+V W L+
Sbjct: 110 VFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRR-NIVTWTSLI 155
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/496 (33%), Positives = 252/496 (50%), Gaps = 86/496 (17%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------- 86
++ Q+ C ++ +L Q++A +++T H + A
Sbjct: 16 RLDVPQIKACKSMRELKQVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQL 75
Query: 87 -----FHWNNIIRLYTRLEAPKKALDIYI----FMSRAGVLPDCYTLPIVLKASCQLFAL 137
F WN +IR E + LD + +S A V P+ +T P VLKA + L
Sbjct: 76 PERNCFAWNTVIRALA--ETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARL 133
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLY------------------------------- 166
G+Q+H L ++ GL +EF + + +Y
Sbjct: 134 AEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRDER 193
Query: 167 ----------------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
++ G+ + AR++FD +R + SWN +I+G +Q+G KEAI++F
Sbjct: 194 GREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYKEAIEIF 253
Query: 211 IGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+ + G P+ VT+VSV A LG LEL VH Y K+K + D ++ ++L+DMY
Sbjct: 254 HRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYA--EKNKIRIDDVLGSALVDMY 311
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG ++ A +VF + Q NV +W ++I G A +G AN+ + M + GI P+ VT++
Sbjct: 312 AKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISPSDVTYI 371
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
+LSAC H G V EG+ FF M N ++P+ HYGCMVDLLGRAG LEEA ++ MPM
Sbjct: 372 AILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPM 431
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
K + VIW L+GA + N+K+G A+ L ++ P GAYV LSN+YAS G W+ V +
Sbjct: 432 KPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNWDGVAAV 491
Query: 450 RAVMKHRNLAKIPAYS 465
R +MK ++ K P S
Sbjct: 492 RLMMKDMDIRKDPGCS 507
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 217/408 (53%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y R +A D+Y M V+PD T+ V+ AS QL L +GR+LH
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
+GL + + +Y +K G E A +
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E PE+ + WNA+I G Q R+KEA+ +F ++ PD +T+V+ SAC LG
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L++ + +H YV K + + +L+DMY KCG + A +VF E+ N +WT++I
Sbjct: 404 LDVGIWMHHYV--DKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G + A+ F M G+ P+ +TF+GVLSAC HGG V +G+ +F M + Y I
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY C+VDLLGRAG LEEA ++ MP + + V+WG L GNV MGE A
Sbjct: 522 SPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAAS 581
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L EL+P G YV+L+N+Y +WE+ ++R +M+ R + K P S
Sbjct: 582 KLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 169/350 (48%), Gaps = 44/350 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALE-IGRQLH 144
F WN IR Y E P A+ +Y M R G +PD YT P++ K C F+L ++
Sbjct: 120 FSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKV-CAGFSLSWTANEIL 178
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
++LG +S+ F + I + G+ ARK+FDE+ R L SWN+II G + G A
Sbjct: 179 GHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLAD 238
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA D++ + + PD+VTM+ V SA L +L L ++H+ + ++ + N+
Sbjct: 239 EAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLT--VPLANA 296
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL------------------- 305
L+DMY KC ++ A +F + + V SWT+M++GYA GL
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 306 ------------ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEM 350
+ EAL FH M+ S + P+ +T V LSAC G + G H+ +
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + A +VD+ + G +++A + E MP + N + W ++
Sbjct: 417 ----HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAII 461
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 213/396 (53%), Gaps = 33/396 (8%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y E+ + + M R GV P+ T +LKA ALE GRQ+H+ ++G ES+
Sbjct: 361 YQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESD 420
Query: 156 EFCESGFISLYSKAG-------------------------------DFEKARKVFDENPE 184
++ ++Y+K G D A KVF E
Sbjct: 421 RSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMST 480
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + SWN +IAG +Q G + ++ +K GF+PD VT++S+ ACG+L LE V
Sbjct: 481 RNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLV 540
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H VK +SDT++ SLI MY KCG + A VF +I + +W +M+ GY +G
Sbjct: 541 HAEA--VKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHG 598
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ EA+D F M + + PN +TF V+SAC G VQEG+ F +M+ ++++P HY
Sbjct: 599 IGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHY 658
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
GCMVDLLGRAG L+EA ++ MP + ++ +W L+GAC+ NV++ EW A H+ LEP
Sbjct: 659 GCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEP 718
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+ YV LSNIYA G W++ ++R VM + L K
Sbjct: 719 SNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKK 754
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 169/332 (50%), Gaps = 9/332 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+++I Y P KA D + M A + P+ T +LKA LE R++H++
Sbjct: 147 WSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVK 206
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+E++ + I++YSK G+ A ++F + ER + SW AII +Q + EA +
Sbjct: 207 ASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFE 266
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + + G P+ VT VS+ ++C + L ++H ++ + ++D ++ N+LI M
Sbjct: 267 LYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE--RGLETDVVVANALITM 324
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN-EALD----CFHYMRESGIRP 323
Y KC + A + F + + +V SW++MI GYA +G + E+LD MR G+ P
Sbjct: 325 YCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFP 384
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N VTF+ +L AC G +++G+ + V E + + ++ + G + EA +
Sbjct: 385 NKVTFMSILKACSVHGALEQGRQIHAEISKV-GFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
M K NVV W L+ K G++ E V
Sbjct: 444 FSKMENK-NVVAWASLLTMYIKCGDLTSAEKV 474
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 152/305 (49%), Gaps = 4/305 (1%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+A+ + + + G+L + T +++ +L E G+ +H LGL + + +
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ YSK GD +VF R + +W+++IA + + +A D F +K EP+
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T +S+ AC + LE A ++H V S ++D + +LI MY KCG + LA ++F
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVV--KASGMETDVAVATALITMYSKCGEISLACEIF 237
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
++ + NV SWT++I A + NEA + + M ++GI PN VTFV +L++C +
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G+ + +E ++ + + +++AR + M K +V+ W ++
Sbjct: 298 RGRRIHSHISE-RGLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWSAMIAG 355
Query: 403 CEKFG 407
+ G
Sbjct: 356 YAQSG 360
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 9/243 (3%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T KC +L ++++ + S WN +I Y + K ++ M
Sbjct: 460 TMYIKCGDLTSAEKVFSEM-------STRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVE 512
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G PD T+ +L+A L ALE G+ +H+ AV+LGLES+ + I +YSK G+ +A
Sbjct: 513 GFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEA 572
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R VFD+ R +WNA++AG Q G EA+D+F + K P+++T +V SACG
Sbjct: 573 RTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRA 632
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWT 294
G ++ ++ + + Q + K ++D+ G+ GR+ A + + +P++S W
Sbjct: 633 GLVQEGREIFR-IMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWH 691
Query: 295 SMI 297
+++
Sbjct: 692 ALL 694
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
L + GR KEAI + +K+ G + T + C L E VHK + ++
Sbjct: 53 LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDEL--GLA 110
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + NSLI+ Y K G + +VF + +V +W+SMI YA N +A D F M
Sbjct: 111 IDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERM 170
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+++ I PN +TF+ +L AC + +++ + ++K +E A ++ + + G
Sbjct: 171 KDANIEPNRITFLSILKACNNYSMLEKAREIHTVVK-ASGMETDVAVATALITMYSKCGE 229
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
+ A + + M + NVV W ++ A
Sbjct: 230 ISLACEIFQKMKER-NVVSWTAIIQA 254
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 216/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y ++ P A+D++ + + + PD T+ V+ A L L+ G +H L V
Sbjct: 499 WNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIV 558
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG-SWNAIIAGLSQDGRAKEAI 207
+LG ES+ ++ I +Y+K G A +F++ K +WN IIA Q+G AKEAI
Sbjct: 559 KLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAI 618
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F ++ F P+ VT VSV A L + H + Q+ S+TL+ NSLID
Sbjct: 619 SSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFL--SNTLVGNSLID 676
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG++ + K+F E+D + SW +M+ GYA +G + A+ F M+ES ++ + V+
Sbjct: 677 MYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVS 736
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VLSAC H G V+EG+ F M + Y I+P HY CMVDLLGRAGL +E ++ M
Sbjct: 737 FVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 796
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ + +WG L+G+C NVK+GE HL +LEP + +VVLS+IYA G W +
Sbjct: 797 PVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAG 856
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ R+ M L K P S
Sbjct: 857 KARSKMNDLGLKKTPGCS 874
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 196/379 (51%), Gaps = 37/379 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIR---------THMLHSYSAAFH-------------------W 89
LS C +L L QI+A II TH+++ YS FH W
Sbjct: 39 LSSCKHLNPLLQIHAQIIVSGFKHHHSITHLINLYSL-FHKCDLARSVFDSTPNPSRILW 97
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++IR YTR + +AL++Y M G+ PD YT VLKA L+ G H R
Sbjct: 98 NSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDR 157
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
GLE + F +G + +YSK GD ++AR+VFD+ P+R + +WNA+IAGLSQ EA+D
Sbjct: 158 RGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDF 217
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F ++ G EP V+++++ L ++EL +H YVF ++ + + N LID+Y
Sbjct: 218 FRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVF----RRDFSSAVSNGLIDLY 273
Query: 270 GKCGRMDLAYKVFWE-IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
KCG +D+A +VF + +DQ +V SW +M+ GYA NG E L+ F M+ +R N V+
Sbjct: 274 SKCGDVDVARRVFDQMVDQDDV-SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSA 332
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V A +++GK +I+ ++ + + G E+A+ + G+
Sbjct: 333 VSAFLAAAETIDLEKGKEIHGCALQ-QRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQ 391
Query: 389 MKANVVIWGCLMGACEKFG 407
+ ++V W ++ A + G
Sbjct: 392 GR-DLVAWSAIIAALVQTG 409
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ II + P++AL ++ M + P+ TL +L A L L++G+ +H V
Sbjct: 398 WSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTV 457
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++S+ + +S+Y+K G F A F+ R + +WN++I G +Q G AID
Sbjct: 458 KADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAID 517
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L+ PD TMV V AC L DL+ +H + VK +SD + N+LIDM
Sbjct: 518 MFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLI--VKLGFESDCHVKNALIDM 575
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG + A +F + D + +W +I Y NG A EA+ FH MR PN VT
Sbjct: 576 YAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVT 635
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VL A + +EG F + + + ++D+ + G L + + M
Sbjct: 636 FVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVG-NSLIDMYAKCGQLXYSEKLFNEM 694
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR--GLWEE 445
K + V W ++ G+ + +QE + D V S + A R GL EE
Sbjct: 695 DHK-DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFV-SVLSACRHXGLVEE 752
Query: 446 VERI 449
+I
Sbjct: 753 GRKI 756
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 188/410 (45%), Gaps = 27/410 (6%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
+L+L PGI K S+ L R + FR+ + + ++ +D + SK
Sbjct: 233 LLNLFPGIC------KLSNIELCRSIHGYVFRRDFSSAVSNGLIDLY-----------SK 275
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C ++ +++ ++ + W ++ Y + L+++ M V +
Sbjct: 276 CGDVDVARRVFDQMVDQDDVS-------WGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
+ A+ + LE G+++H A++ ++S+ + + +Y+K G+ EKA+++F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
R L +W+AIIA L Q G +EA+ +F ++ +P+ VT++S+ AC L L+L
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+H F VK+ SD +L+ MY KCG A F + ++ +W S+I GY
Sbjct: 449 GKSIH--CFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGY 506
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
A G A+D F+ +R S I P+ T VGV+ AC + +G ++ + E
Sbjct: 507 AQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKL-GFESD 565
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G L A + + V W ++ A + G+ K
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAK 615
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 217/408 (53%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y R +A D+Y M V+PD T+ V+ AS QL L +GR+LH
Sbjct: 224 WNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
+GL + + +Y +K G E A +
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E PE+ + WNA+I G Q R+KEA+ +F ++ PD +T+V+ SAC LG
Sbjct: 344 LFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGA 403
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L++ + +H YV K + + +L+DMY KCG + A +VF E+ N +WT++I
Sbjct: 404 LDVGIWMHHYV--DKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAII 461
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G + A+ F M G+ P+ +TF+GVLSAC HGG V +G+ +F M + Y I
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGI 521
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY C+VDLLGRAG LEEA ++ MP + + V+WG L GNV MGE A
Sbjct: 522 SPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAAS 581
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L EL+P G YV+L+N+Y +WE+ ++R +M+ R + K P S
Sbjct: 582 KLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 169/350 (48%), Gaps = 44/350 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALE-IGRQLH 144
F WN IR Y E P A+ +Y M R G +PD YT P++ K C F+L ++
Sbjct: 120 FSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKV-CAGFSLSWTANEIL 178
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
++LG +S+ F + I + G+ ARK+FDE+ R L SWN+II G + G A
Sbjct: 179 GHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLAD 238
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA D++ + + PD+VTM+ V SA L +L L ++H+ + ++ + N+
Sbjct: 239 EAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLT--VPLANA 296
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL------------------- 305
L+DMY KC ++ A +F + + V SWT+M++GYA GL
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 306 ------------ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEM 350
+ EAL FH M+ S + P+ +T V LSAC G + G H+ +
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + A +VD+ + G +++A + E MP + N + W ++
Sbjct: 417 ----HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGR-NSLTWTAII 461
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 219/378 (57%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + +A+ ++ R V P TL VL A + L G+ +H +
Sbjct: 174 WNSLISGFMKAGHFDEAISVFF---RMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIE 230
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + N + + +Y K G F +A+ +FDE P R + SW +I GL Q K++++
Sbjct: 231 R-RFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLE 289
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD + + SV SAC SLG L+ VH+Y+ Q K D + +++DM
Sbjct: 290 LFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQ--RGIKWDIHIGTAIVDM 347
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +++A K+F+ + Q N +W +++ G A +GL +EAL+ F M SG++PN +TF
Sbjct: 348 YAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITF 407
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L+AC H G V EG+ +F+ M +Y + P+ HYGCM+DL RAGLLEEA + MP
Sbjct: 408 LAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMP 467
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK +V+IWG L+ AC GN+++ + ++ EL+ G +V+LSNI A W V R
Sbjct: 468 MKPDVLIWGLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTR 527
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R +MK R + K P S+
Sbjct: 528 LRRLMKDRGVRKAPGSSV 545
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 160/316 (50%), Gaps = 8/316 (2%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+F +N++I Y E P+ A+ +Y M R G +PD +T P++LKA GRQ+H
Sbjct: 69 GSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVH 128
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ V+LGL ++ + ++ I Y GDF A KVFDE R + SWN++I+G + G
Sbjct: 129 GVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFD 188
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI +F + EP T+VSV +AC GDL +H ++ + K + ++ N+
Sbjct: 189 EAISVFF---RMDVEPSMTTLVSVLAACARNGDLCTGKGIHGV---IERRFKVNLVLGNA 242
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
++DMY K G A +F E+ ++ SWT MI G + ++L+ F MR GI P+
Sbjct: 243 MLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPD 302
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+ VLSAC G + G E + N I+ +VD+ + G +E A +
Sbjct: 303 AIILTSVLSACASLGTLDFGTWVHEYI-NQRGIKWDIHIGTAIVDMYAKCGCIEMALKIF 361
Query: 385 EGMPMKANVVIWGCLM 400
M + N W L+
Sbjct: 362 YSMSQR-NTFTWNALL 376
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 222/372 (59%), Gaps = 3/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y + P +AL+I+ M + V PDC L VL A L LE GR +H+ +
Sbjct: 190 WTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVM 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE+ ++Y+K G A+ +FD+ L WNA+I+G +++G AK+AID
Sbjct: 250 KMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAID 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + PD +++ S SAC +G LE A + +YV +S + D + ++LIDM
Sbjct: 310 LFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYV--SRSDYRDDVFISSALIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG ++ A VF +V W++MIVGY +G A EA+ + M G+ PN VTF
Sbjct: 368 FAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G V+EG FF M + ++I P+ HY C++DLLGRAG L++A +++ MP
Sbjct: 428 LGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP 486
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+ AC+K +V++G++ A+ L ++P + G YV LSN+YA+ LW+ V
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 449 IRAVMKHRNLAK 460
+R MK + L K
Sbjct: 547 VRVRMKEKGLNK 558
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/395 (31%), Positives = 204/395 (51%), Gaps = 40/395 (10%)
Query: 40 ASSFLDT----HEDPAKIVATQLSKCTNLLQLNQIYAHIIR----------THMLHSYSA 85
AS FL T H D A+ + T+ QL QI+A ++ T ++H+ S+
Sbjct: 8 ASPFLYTNSGIHSD--SFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSS 65
Query: 86 ------------------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
F WN IIR Y+R + AL +Y M A V PD +T P +
Sbjct: 66 YGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHL 125
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPER 185
LKA L L++GR +H+ RLG E++ F ++G I+LY+K AR VF+ PER
Sbjct: 126 LKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPER 185
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+ SW AI++ +Q+G EA+++F ++K +PD V +VSV +A L DLE +H
Sbjct: 186 TIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIH 245
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
V ++ + + D L+ SL MY KCG++ A +F ++ PN+ W +MI GYA NG
Sbjct: 246 ASVMKMGLETEPDLLI--SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGF 303
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
A +A+D FH M +RP+ ++ +SAC G +++ + E + + F
Sbjct: 304 AKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFIS-S 362
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + G +E AR++ + + +VV+W ++
Sbjct: 363 ALIDMFAKCGSVECARSVFD-RTLDRDVVVWSAMI 396
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 139/273 (50%), Gaps = 8/273 (2%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H+ + LGL+ + F + I S GD AR+VFD+ P ++ WNAII G S++
Sbjct: 38 RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
++A+ M+ ++ PD T + ACG L L++ VH VF++ ++D
Sbjct: 98 NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGF--EADVF 155
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ N LI +Y KC R+ A VF + P + SWT+++ YA NG EAL+ F MR+
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
++P+ V V VL+A +++G+ +MK + EP + + + G +
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDL--LISLNTMYAKCGQV 273
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
A+ + + M N+++W ++ K G K
Sbjct: 274 ATAKILFDKMK-SPNLILWNAMISGYAKNGFAK 305
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 217/377 (57%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + + P +AL + M RA P +T LKA+ IG Q+H+LAV
Sbjct: 131 WTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAV 190
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ L+ + + S + +Y++ + A +VFD + SWNA+IAG ++ G + +
Sbjct: 191 KYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLM 250
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF T SV SA +G LE VH ++ +KS QK + N+++ M
Sbjct: 251 KFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHM--IKSGQKLTAFVANTILGM 308
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +DQ ++ +W +M+ +A GL EA+ F +R+ GI+ N +TF
Sbjct: 309 YAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITF 368
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V+EGK +F+MMK+ Y +EP HY VDLLGRAGLL+EA V MP
Sbjct: 369 LSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 427
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ +WG L+GAC N K+G++ A H+ EL+P G V+L NIYAS G W++ R
Sbjct: 428 MEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYASTGQWDDAAR 487
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 488 VRKMMKATGVKKEPACS 504
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
++ A Q L R +HS R L + F + I +Y K G AR VFD P R
Sbjct: 68 IITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIPTRD 127
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW +I G +Q+ EA+ + + + F P T S A G+ G + Q+H
Sbjct: 128 VVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMH- 186
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
VK D + ++L+DMY +C +MD+A +VF +D N SW ++I G+A G
Sbjct: 187 -ALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDG 245
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYG 365
L F M+ +G H T+ V SA G +++G+ M+K+ ++ A+
Sbjct: 246 ETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVAN-- 303
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
++ + ++G + +AR + + + + ++V W ++ A ++G +G+ H +E+ +
Sbjct: 304 TILGMYAKSGSMVDARKVFDRVDQR-DLVTWNTMLTAFAQYG---LGKEAVAHFEEIRKY 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 14/233 (6%)
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
S+ +AC +L A +H ++ +S+ D +LNSLI MY KCG + A VF I
Sbjct: 67 SIITACAQSKNLAGARAIHSHL--SRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SWT +I GYA N + EAL M + RP+ TF L A G G+
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACG----GRG 180
Query: 347 FFEMMKNV---YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
E M + Y ++ ++D+ R ++ A + + + K N V W L+
Sbjct: 181 IGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSK-NEVSWNALIAGF 239
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGA-YVVLSNIYASRGLWEEVERIRAVMKH 455
+ G+ GE E++ GA + S+++++ +E+ R V H
Sbjct: 240 ARKGD---GETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAH 289
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 225/378 (59%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R + +A+ ++ M + GV + T+ VLKA+ ++ + GR +H L +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G ++ + F S + +Y K ++ A+KVFDE P R + +W A+IAG Q + +
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGM 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K P++ T+ SV SAC +G L +VH Y+ +K+ + +T +LID
Sbjct: 292 LVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM--IKNSIEINTTAGTTLID 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG ++ A VF + + NV +WT+MI G+AA+G A +A D F+ M S + PN VT
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ VLSAC HGG V+EG+ F MK + +E + HY CMVDL GR GLLEEA+A++E M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMELKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ V+WG L G+C + ++G++ A + +L+P G Y +L+N+Y+ W+EV
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R MK + + K P +S
Sbjct: 530 RVRKQMKDQQVVKSPGFS 547
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 192/388 (49%), Gaps = 16/388 (4%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR--QLHS 145
H++ I L RL + Y M R GV+P +T P +LKA +F L Q H+
Sbjct: 76 HFSGGITLNRRL-----SFLAYRHMRRNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHA 127
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ GL+S+ F + IS YS +G F+ A ++FD ++ + +W A+I G ++G A E
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F+ +KK G +++T+VSV A G + D+ VH + + K D + +SL
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET-GRVKCDVFIGSSL 246
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMYGKC D A KVF E+ NV +WT++I GY + ++ + F M +S + PN
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T VLSAC H G + G+ M+KN IE ++DL + G LEEA +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKN--SIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
E + K NV W ++ G + + L ++ ++ + + A GL
Sbjct: 365 ERLHEK-NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 444 EEVERIRAVMKHRNLAKIPAYSLATRLD 471
EE R+ MK R ++ A A +D
Sbjct: 424 EEGRRLFLSMKGRFNMELKADHYACMVD 451
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 239/451 (52%), Gaps = 38/451 (8%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P+ I + +K N + +I +S W + + Y R +A +
Sbjct: 21 PSSIPLSNPTKLNFPRSPNSPHRNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEF 80
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALE---IGRQLHSLAVRLGLESNE-FCESGFISL 165
M AGV P+ T I L ++C F E LH A + GL++ + I +
Sbjct: 81 TRMRLAGVEPNHITF-ITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDM 139
Query: 166 YSKAGDFEKARKVF-------------------------------DENPERKLGSWNAII 194
YSK ARKVF DE P R SW A+I
Sbjct: 140 YSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTRDAISWTALI 199
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
GL + G +++A++ F +++ G D V++++V +AC LG L L L VH++V + +
Sbjct: 200 NGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFV--MPQE 257
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
K + + NSLIDMY +CG ++ A +VF ++ + + SW S+IVG+A NG A+E+L+ F
Sbjct: 258 FKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVSWNSIIVGFAVNGFADESLEFFX 317
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M++ G +P+ V++ G L+AC H G V +G F+ MK+V++I PR HYGC+VDL GRA
Sbjct: 318 AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRA 377
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G LE+A M+E MPMK N V+ G L+ AC G+V + E + KHL +L+P D YV+LS
Sbjct: 378 GRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLS 437
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NIYA+ G W+ +R MK R + K P YS
Sbjct: 438 NIYAAIGKWDGANNVRRTMKARGVQKKPGYS 468
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 225/377 (59%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + R +A+++ M G P+ T VL A +L L +G+++H+ +
Sbjct: 411 WNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARII 470
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+G + F + +YSK G A+ VF+ + ++ S+N +I G S+ + E++
Sbjct: 471 RVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEV-SYNILIIGYSRTNDSLESLR 529
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD V+ + V SAC +L + ++H + V+ + + NSL+D+
Sbjct: 530 LFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLL--VRKLFHTHLFVANSLLDL 587
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR+DLA KVF+ I +V+SW +MI+GY G + A++ F M+E G+ + V+F
Sbjct: 588 YTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSF 647
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSAC HGG +++G+ +F+MM ++ IEP HY CMVDLLGRAGL+EEA ++ G+
Sbjct: 648 VAVLSACSHGGLIEKGRKYFKMMCDL-NIEPTHTHYACMVDLLGRAGLMEEAADLIRGLS 706
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + IWG L+GAC GN+++G W A+HL EL+P G Y++LSN+YA W+E +
Sbjct: 707 IIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANK 766
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK R K P S
Sbjct: 767 VRELMKSRGAKKNPGCS 783
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 169/353 (47%), Gaps = 15/353 (4%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYS-----AAFHWNNIIRLYTRLEAPKKALDIYIF 111
+S C +L+ + H + +L +S +AF WN +IR + Y
Sbjct: 69 SVSLCASLILQYASFGHPSNSLLLFQHSVAYSRSAFLWNTLIRA-NSIAGVFDGFGTYNT 127
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M RAGV PD T P VLK + GR++H +A +LG + + F + ++ Y G
Sbjct: 128 MVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGL 187
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVT 229
F A KVFDE PER SWN +I S G +EA+ F + K G +PD VT+VSV
Sbjct: 188 FGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVL 247
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
C D +A VH Y +V + N+L+D+YGKCG + KVF EID+ N
Sbjct: 248 PVCAETEDKVMARIVHCYALKV-GLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERN 306
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HF 347
V SW ++I ++ G +ALD F M + G+RPN VT +L G + G H
Sbjct: 307 VISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHG 366
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
F + IE ++D+ ++G A + M ++ N+V W ++
Sbjct: 367 FSLK---MAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVR-NIVSWNAMI 415
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 198/409 (48%), Gaps = 44/409 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II ++ ALD++ M G+ P+ T+ +L +L ++G ++H ++
Sbjct: 310 WNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSL 369
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ +ES+ F + I +Y+K+G A +F++ R + SWNA+IA +++ EA++
Sbjct: 370 KMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVE 429
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ G P++VT +V AC LG L + ++H + +V S D + N+L DM
Sbjct: 430 LVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSL--DLFVSNALTDM 487
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++LA VF I + S+ +I+GY+ + E+L F MR G+RP+ V+F
Sbjct: 488 YSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSF 546
Query: 329 VGVLSACVHGGKVQEGKHFFEMM-----------------------------KNVYQIEP 359
+GV+SAC + +++GK ++ K Y I+
Sbjct: 547 MGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQN 606
Query: 360 R-FAHYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWV 415
+ A + M+ G G L+ A + E M ++ + V + ++ AC G ++ G
Sbjct: 607 KDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKY 666
Query: 416 AKHLQEL--EPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
K + +L EP + Y + ++ GL EE + R L+ IP
Sbjct: 667 FKMMCDLNIEP-THTHYACMVDLLGRAGLMEEAADLI-----RGLSIIP 709
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 218/378 (57%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y E KA+ + M G D T+ +L + Q L G+ +H+ +
Sbjct: 226 WNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGI 285
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G +S+ + IS+YSK GD AR +FD + SW A+IAG ++ G EA+
Sbjct: 286 QVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMT 345
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G +PD VT++S+ S CG G LEL + Y + K + ++ N+LID+
Sbjct: 346 LFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYA--TANGLKDNLMVCNALIDV 403
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A ++F+ + + ++ SWT++I G A NG EAL F M E G++PNH+TF
Sbjct: 404 YAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITF 463
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL AC H G +++G F +M VY+I P HY CM DLLGR G L+EA ++ MP
Sbjct: 464 LAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMP 523
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K +V IW L+ AC+ NV +GE VA HL ELEP + YV ++NIYAS G W+ V
Sbjct: 524 FKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAA 583
Query: 449 IRAVMKHRNLAKIPAYSL 466
IR +MK K P SL
Sbjct: 584 IRTMMKCNKAMKSPGKSL 601
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 177/413 (42%), Gaps = 50/413 (12%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+ I KAL ++ M + G+ P+ T P V KA +L L+ + +H+
Sbjct: 21 QWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHV 80
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ +++ F ++ + +Y K A +F P+R + SWN++I G +Q G +
Sbjct: 81 VKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVV 140
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G D VT++ +T + SL DL++ +H F +K +D + N+ I
Sbjct: 141 SLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHS--FGIKIGIDTDVSVSNTWIA 198
Query: 268 MYGKCGRMDLAYKVFWEIDQ--PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
Y KCG LA VF ID+ SW SMI GYA ++A+ F M G R +
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADL 258
Query: 326 VTFVGVLSACV------HG-----------------------------GKVQEGKHFFEM 350
T + +LS+CV HG G + ++ F+
Sbjct: 259 STILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDN 318
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEGMPMKANVVIWGCLMGACEKFG 407
M ++ + M+ G L+EA + +E + K ++V LM C + G
Sbjct: 319 MLGKTRVS-----WTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTG 373
Query: 408 NVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL 458
+++G+W+ + D V L ++YA G + + M ++L
Sbjct: 374 ALELGKWIDTYATA-NGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSL 425
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN+ I G A +A+ +F +K+ G EP+++T SV AC L +L+ + VH
Sbjct: 19 VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+V VKS+ ++D + S++DMY KC ++ AY +F + + +V+SW SMI+G+A G
Sbjct: 79 HV--VKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFV 136
Query: 307 NEALDCFHYMRESGIRPNHVTFVGV 331
+ + F M GIR + VT +G+
Sbjct: 137 DRVVSLFCEMGIEGIRADSVTVIGL 161
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
V+ W S I G A++AL F M+++G+ PN++TF V AC
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKAC 64
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/374 (38%), Positives = 214/374 (57%), Gaps = 2/374 (0%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
II Y AL+I+ ++ + P+ TL VL A L L +G++LH+ ++ G
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L+ S + +Y+K G + A ++F PE+ WNAII SQ+G+ +EAID+F
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + G D V++ + SAC +L L +H F +K S+ ++LIDMYGK
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHS--FMIKGAFDSEVFAESALIDMYGK 423
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + +A VF + + N SW S+I Y ++G +L FH M E GI+P+HVTF+ +
Sbjct: 424 CGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTI 483
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
LSAC H G+V +G +F M Y I R HY C+VDL GRAG L EA ++ MP
Sbjct: 484 LSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSP 543
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+ +WG L+GAC GNV++ E ++ L +L+P + G YV+LSN++A G W V +IR+
Sbjct: 544 DDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRS 603
Query: 452 VMKHRNLAKIPAYS 465
+MK R + K+P YS
Sbjct: 604 LMKKRGVQKVPGYS 617
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 152/321 (47%), Gaps = 8/321 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + + P A+ ++ M P+ T VL E G QLH L +
Sbjct: 41 WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + +++YSK G A K+F+ P+ + +WN +IAG Q+G EA
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL 160
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G PD +T S + L+ ++H Y+ ++ D + ++LID+
Sbjct: 161 LFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYI--LRHGIALDVFLKSALIDI 218
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + +A K+F + ++ T++I GY NGL N+AL+ F ++ E + PN VT
Sbjct: 219 YFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
VL AC + GK E+ N+ + ++ R ++D+ + G L+ A +
Sbjct: 279 ASVLPACAGLATLNLGK---ELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRR 335
Query: 387 MPMKANVVIWGCLMGACEKFG 407
MP K + V W ++ C + G
Sbjct: 336 MPEK-DAVCWNAIITNCSQNG 355
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 2/196 (1%)
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
+G +EF S I LY++ G E AR++FD+ P + WN ++ G + G A+ +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F ++ C +P+ +T SV S C S E Q+H V + D L+ N+L+ MY
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLV--ISCGFHFDPLVANALVAMY 118
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
K G++ A K+F + NV +W MI G+ NG +EA F M +G+ P+ +TF
Sbjct: 119 SKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFA 178
Query: 330 GVLSACVHGGKVQEGK 345
L + +++GK
Sbjct: 179 SFLPSVTESASLKQGK 194
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 125/258 (48%), Gaps = 15/258 (5%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD + +KC L QI+ + A WN II ++ P+
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKD-------AVCWNAIITNCSQNGKPQ 358
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+D++ M R G+ DC ++ L A L AL G+ +HS ++ +S F ES I
Sbjct: 359 EAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALI 418
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y K G+ AR VFD E+ SWN+IIA G + ++ +F + + G +PD V
Sbjct: 419 DMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHV 478
Query: 224 TMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
T +++ SACG G ++ +Q + + + + ++ + ++D++G+ GR++ A++
Sbjct: 479 TFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEH----YACIVDLFGRAGRLNEAFE 534
Query: 281 VFWEID-QPNVSSWTSMI 297
+ P+ W +++
Sbjct: 535 TIKNMPFSPDDGVWGTLL 552
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 219/372 (58%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + P+KALD+Y+ M+ +G+ PD +T+ +L A ++ +L G ++H A+
Sbjct: 376 WNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFAL 435
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + F +SLY G A+ +FD R L SWN +IAG SQ+G EAI+
Sbjct: 436 RNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAIN 495
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +P ++ ++ V AC L L L ++H F +K+ D + +S+IDM
Sbjct: 496 LFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH--CFALKAHLTEDIFVSSSIIDM 553
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + L+ ++F + + +V+SW +I GY +G EAL+ F M G++P+ TF
Sbjct: 554 YAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTF 613
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G+L AC H G V++G +F M N++ IEP+ HY C+VD+LGRAG +++A ++E MP
Sbjct: 614 TGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMP 673
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ IW L+ +C GN+ +GE VA L ELEP YV++SN++A G W++V R
Sbjct: 674 GDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRR 733
Query: 449 IRAVMKHRNLAK 460
+R MK L K
Sbjct: 734 VRGRMKDIGLQK 745
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 163/321 (50%), Gaps = 15/321 (4%)
Query: 32 RKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNN 91
R H +SA++ F + +I+ T S C + ++ + R ++ F WN
Sbjct: 19 RLHEMVSASTQFCNDFVLNTRII-TMYSMCGSPSDSRMVFDKLRRKNL-------FQWNA 70
Query: 92 IIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
I+ YTR E + A+ I+ +S PD +TLP V+KA L L +G+ +H +A ++
Sbjct: 71 IVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKM 130
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
L S+ F + I++Y K G E+A KVF+ PER L SWN+II G S++G +E+ + F
Sbjct: 131 DLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAF 190
Query: 211 --IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + + F PD T+V+V C D+E + VH VK + ++ NSLIDM
Sbjct: 191 REMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG--LAVKLGLNEELMVNNSLIDM 248
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR--ESGIRPNHV 326
Y KC + A +F + D+ N+ SW SMI GYA M+ ++ ++ +
Sbjct: 249 YSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEF 308
Query: 327 TFVGVLSACVHGGKVQEGKHF 347
T + VL C+ ++Q K
Sbjct: 309 TILNVLPVCLERSELQSLKEL 329
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 155/315 (49%), Gaps = 9/315 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I Y R E + + M A + D +T+ VL + L+ ++LH
Sbjct: 273 WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGY 332
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ R GL+SNE + FI+ Y++ G + +VFD + + SWNA++ G +Q+ ++A
Sbjct: 333 SWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKA 392
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+D+++ + G +PD T+ S+ AC + L ++H F +++ D + SL+
Sbjct: 393 LDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG--FALRNGLAVDPFIGISLL 450
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+Y CG+ A +F ++ ++ SW MI GY+ NGL +EA++ F M GI+P +
Sbjct: 451 SLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEI 510
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ V AC ++ GK + E F ++D+ + G + ++ + +
Sbjct: 511 AIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS-SSIIDMYAKGGCIGLSQRIFDR 569
Query: 387 MPMKA----NVVIWG 397
+ K NV+I G
Sbjct: 570 LREKDVASWNVIIAG 584
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 16/287 (5%)
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC-----ESGFISLYSKAGDFEKARKV 178
+ ++L+A Q +E+GR+LH + S +FC + I++YS G +R V
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVS----ASTQFCNDFVLNTRIITMYSMCGSPSDSRMV 56
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGD 237
FD+ + L WNAI++ +++ ++A+ +F L +PD+ T+ V AC L D
Sbjct: 57 FDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLD 116
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L L +H K SD + N+LI MYGKCG ++ A KVF + + N+ SW S+I
Sbjct: 117 LGLGQIIHG--MATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSII 174
Query: 298 VGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
G++ NG E+ + F M E P+ T V VL C +++G + +
Sbjct: 175 CGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLG 234
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
E + ++D+ + L EA+ + + K N+V W ++G
Sbjct: 235 LNEELMVN-NSLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGG 279
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 224/413 (54%), Gaps = 34/413 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +NN+I + P +A+ ++ + G+ PD Y+ P VLKA L A+ +G+Q+H
Sbjct: 94 FFYNNVIWALSS-SNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQ 152
Query: 147 AVRLGLESNEFCESGFISLYS-------------------------------KAGDFEKA 175
A+ GL+S+ + + +YS K G+ A
Sbjct: 153 AIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNA 212
Query: 176 RKVFDENPE--RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
R +F+ PE R + SW +I+G +Q EAI +F + +PD++ +++V SAC
Sbjct: 213 RNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACA 272
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L+L +H Y+ + +K + + NSLIDMY K G + A ++F + + +W
Sbjct: 273 DLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITW 332
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T++I G A +G EALD F M ++ ++PN VT + VLSAC H G V+ G++ F M++
Sbjct: 333 TTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRS 392
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGCM+DLLGRAG L+EA +V MP +AN +WG L+ A ++G+ +
Sbjct: 393 KYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAA 452
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+HL LEP + G Y +LSN YA+ G W+E +R VM+ K+P S
Sbjct: 453 EALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSF 505
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 248/480 (51%), Gaps = 69/480 (14%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIR----------THMLHSYSAAFHWNNIIRLYTRLEAPK 103
V L C + L +++AH +R T ++H +A + R+++++ P
Sbjct: 16 VMASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPN 75
Query: 104 ------------------KALDIYIFMSRAGVLP-------DCYTLPIVLKASCQLFALE 138
A+ +YI M R P D +T P +LKA L AL+
Sbjct: 76 LHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALD 135
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN------- 191
+G+Q+H VR G ESN ++ I +Y++AGD ARKVFD ER + SWN
Sbjct: 136 LGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVISAHA 195
Query: 192 ------------------------AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
A+++G + G A++ F ++ GFEPDDV++V+
Sbjct: 196 RLGQMRKARAVFNSMPDKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVA 255
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V AC LG LEL ++ Y + + +T + N+L++MY KCG +D A ++F + +
Sbjct: 256 VLPACAQLGALELGRWIYAYCN--RHQMLRETYVCNALVEMYAKCGCIDQALQLFNGMAE 313
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW++M+ G AA+G A EA+ F M R+ ++PN +TFVG+LSAC H G + EG
Sbjct: 314 KDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHAGLLDEGLD 373
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+F+ M +VY IEP HYGC+VDLL R+G ++ ++ MP+ A+ IWG ++ AC
Sbjct: 374 YFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDLISDMPLPADAKIWGSVLNACRSH 433
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G+V A+ L LEP G V+L+N+YA+ W EV R ++ R++ K P SL
Sbjct: 434 GDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRWSEVANTRKAIRSRSMRKTPGCSL 493
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 232/412 (56%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAF---------HWNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + ++R M+ F W +I + ++ALD++ M
Sbjct: 203 NVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMR 262
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
AG D +T VL A L AL G+Q+H+ +R + N F S + +YSK +
Sbjct: 263 LAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIK 322
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF P++ + SW A++ G Q+G ++EA+ +F +++ G EPDD T+ SV S+C
Sbjct: 323 SAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCA 382
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S S + N+LI +YGKCG + ++++F E++ + SW
Sbjct: 383 NLASLEEGAQFH--CRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSW 440
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+++ GYA G ANE + F M G++P+ VTF+GVLSAC G V++G +FE M
Sbjct: 441 TALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIK 500
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P H C++DLLGRAG LEEAR + MP +VV W L+ +C G++++G+
Sbjct: 501 EHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGK 560
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A L LEP + +YV+LS++YAS+G W++V ++R M+ + + K P YS
Sbjct: 561 WAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYS 612
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 174/381 (45%), Gaps = 43/381 (11%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SK L Q+ QI+ L + WN I Y + A+ +Y M + +
Sbjct: 82 SKLGLLSQMQQIFN-------LMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAM 134
Query: 119 P-DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
+ T +L + +++GRQ++ ++ G S+ F S + +Y+K G A++
Sbjct: 135 NLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKR 194
Query: 178 VFDENPERKLG-------------------------------SWNAIIAGLSQDGRAKEA 206
FDE PER + SW +I GL Q+G +EA
Sbjct: 195 YFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREA 254
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+DMF ++ GF D T SV +ACGSL L Q+H YV +++ K + + ++L+
Sbjct: 255 LDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYV--IRTDHKDNVFVGSALV 312
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC + A VF + Q NV SWT+M+VGY NG + EA+ F M+ +G+ P+
Sbjct: 313 DMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDF 372
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T V+S+C + ++EG F V + ++ L G+ G E + +
Sbjct: 373 TLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTE 431
Query: 387 MPMKANVVIWGCLMGACEKFG 407
M ++ + V W L+ +FG
Sbjct: 432 MNIR-DEVSWTALLAGYAQFG 451
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 67/337 (19%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+LK C+ ++LH L ++ + F + I+ Y K G+ A VFD P+
Sbjct: 11 LLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPN 70
Query: 187 LGSWNAI-------------------------------IAGLSQDGRAKEAIDMF-IGLK 214
L SWN I I+G + G +A+ ++ + LK
Sbjct: 71 LFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLK 130
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK--- 271
+ +T ++ C ++L Q++ + +K SD + + L+DMY K
Sbjct: 131 DAAMNLNRITFSTMLILCSKFRCVDLGRQINGQI--LKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 272 ----------------------------CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
CG ++ + ++F + + + SWT MI G N
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQN 248
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
GL EALD F MR +G + TF VL+AC + EGK + + F
Sbjct: 249 GLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVG 308
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ + ++ A + + MP K NV+ W ++
Sbjct: 309 -SALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAML 343
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 222/372 (59%), Gaps = 3/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y + P +AL+I+ M + V PD L VL A L L+ GR +H+ V
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE ++Y+K G A+ +FD+ L WNA+I+G +++G A+EAID
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + PD +++ S SAC +G LE A +++YV +S + D + ++LIDM
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG--RSDYRDDVFISSALIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG ++ A VF +V W++MIVGY +G A EA+ + M G+ PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G V+EG FF +M + ++I P+ HY C++DLLGRAG L++A +++ MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+ AC+K +V++GE+ A+ L ++P + G YV LSN+YA+ LW+ V
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 449 IRAVMKHRNLAK 460
+R MK + L K
Sbjct: 547 VRVRMKEKGLNK 558
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 6/316 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN IIR Y+R + AL +Y M A V PD +T P +LKA L L++GR +H+
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRAK 204
RLG +++ F ++G I+LY+K AR VF+ PER + SW AI++ +Q+G
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+++F ++K +PD V +VSV +A L DL+ +H V ++ + + D L+ S
Sbjct: 205 EALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--S 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L MY KCG++ A +F ++ PN+ W +MI GYA NG A EA+D FH M +RP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
++ +SAC G +++ + +E + + F ++D+ + G +E AR +V
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS-SALIDMFAKCGSVEGAR-LV 380
Query: 385 EGMPMKANVVIWGCLM 400
+ +VV+W ++
Sbjct: 381 FDRTLDRDVVVWSAMI 396
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 221/378 (58%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +II Y + +AL ++ M GV PD L +L+A + LE GR +H +
Sbjct: 223 WTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVI 282
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE + Y+K G A+ FD+ + WNA+I+G +++G A+EA++
Sbjct: 283 KMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVN 342
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + +PD VT+ S A +G LELA + YV KS SD + SLIDM
Sbjct: 343 LFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYV--SKSNYGSDIFVNTSLIDM 400
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF +V W++MI+GY +G EA++ +H M+++G+ PN VTF
Sbjct: 401 YAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTF 460
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L+AC H G V+EG F MK+ ++I PR HY C+VDLLGRAG L EA A + +P
Sbjct: 461 IGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIP 519
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+ AC+ + V +GE+ A L L+P++ G YV LSN+YAS LW+ V
Sbjct: 520 IEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAH 579
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R +M+ + L K YS+
Sbjct: 580 VRVLMREKGLNKDLGYSV 597
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 4/318 (1%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y F WN IIR Y+R + +++Y +M GV PD +T P VLKA +L +
Sbjct: 116 YPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCI 175
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H ++ G S+ F ++G ++LY+K G A+ VFD R + SW +II+G +Q+G+
Sbjct: 176 IHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGK 235
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
A EA+ MF ++ G +PD + +VS+ A + DLE +H +V +K + + +L
Sbjct: 236 AVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFV--IKMGLEDEPALL 293
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
SL Y KCG + +A F ++ NV W +MI GYA NG A EA++ FHYM I+
Sbjct: 294 ISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIK 353
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ VT + A G ++ + + + F + ++D+ + G +E AR
Sbjct: 354 PDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTS-LIDMYAKCGSVEFARR 412
Query: 383 MVEGMPMKANVVIWGCLM 400
+ + K +VV+W ++
Sbjct: 413 VFDRNSDK-DVVMWSAMI 429
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 8/271 (2%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+H+ V GL+ N F + ++ S G ARK+FDE + WNAII S++
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
++ ++M+ ++ G PD T V AC L D L+ +H + +K SD +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQI--IKYGFGSDVFV 191
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N L+ +Y KCG + +A VF + + SWTS+I GYA NG A EAL F MR +G+
Sbjct: 192 QNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGV 251
Query: 322 RPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+P+ + V +L A +++G+ H F ++K + EP A + + GL+
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGF-VIKMGLEDEP--ALLISLTAFYAKCGLVTV 308
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
A++ + M NV++W ++ K G+ +
Sbjct: 309 AKSFFDQMK-TTNVIMWNAMISGYAKNGHAE 338
>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 640
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 260/497 (52%), Gaps = 83/497 (16%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA----------------------- 86
PA + Q++ C + L+QI+A I++ + AA
Sbjct: 15 PASSLFPQINTCRTIRDLSQIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKI 74
Query: 87 ---------FHWNNIIRLYTRLEAPKKALDIYIF---MSRAGVLPDCYTLPIVLKASCQL 134
F WN IIR ++ + K + I +F MS + P+ +T P VLKA +
Sbjct: 75 FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKT 134
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYS--------------------------- 167
++ G+Q+H LA++ G +EF S + +Y
Sbjct: 135 GKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDR 194
Query: 168 ------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
+ GD + AR +FD+ +R + SWN +I+G SQ+G K+A+++
Sbjct: 195 RKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEV 254
Query: 210 FIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +KK P+ VT+VSV A LG LEL +H Y S + D ++ ++LIDM
Sbjct: 255 FREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYA--EDSGIRIDDVLGSALIDM 312
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A VF + + NV +W++MI G+A +G A +A+DCF MR++G+RP+ V +
Sbjct: 313 YSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAY 372
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L+AC H G V+EG+ +F M +V +EPR HYGCMVDLLGR GLL+EA + MP
Sbjct: 373 INLLTACSHAGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMP 432
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + VIW L+GAC NV+MG+ VA L ++ P GAYV LSN+YAS+G W EV
Sbjct: 433 IKPDDVIWKALLGACRMHRNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSE 492
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK ++ K P S
Sbjct: 493 MRLRMKEMDIRKDPGCS 509
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 212/362 (58%), Gaps = 3/362 (0%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
+L Y M + V P YT V+K+ L AL+ GR +H + G + + ++ ++
Sbjct: 95 SLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVA 154
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
LY K GD ARKVFD+ ER + +WN++I+G Q+G AKEAI +F +K+ G EPD T
Sbjct: 155 LYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSAT 214
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
VSV SAC LG L VH+Y+ V + + ++ SLI+MY +CG + A +VF
Sbjct: 215 FVSVLSACAHLGAFSLGCWVHEYI--VGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDS 272
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + NV +WT+MI GY NG ++A++ FH MR +G+ PN +TFV VLSAC H G V EG
Sbjct: 273 MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVNEG 332
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV-EGMPMKANVVIWGCLMGAC 403
+ F ++ Y + P H C+VD+LGRAGLL+EA + E +P I ++GAC
Sbjct: 333 RRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILTAMLGAC 392
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ N +G VA+HL EP + YV+LSNIYA G ++VE +R M + L K
Sbjct: 393 KMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKCLKKQVG 452
Query: 464 YS 465
YS
Sbjct: 453 YS 454
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 16/243 (6%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +L+ +++ I ++ WN++I Y + K+A+ ++ M GV P
Sbjct: 158 KCGDLINARKVFDKIRERSIVA-------WNSMISGYEQNGFAKEAIGLFDRMKETGVEP 210
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D T VL A L A +G +H V GL+ N + I++Y + G+ KAR+VF
Sbjct: 211 DSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVF 270
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D ER + +W A+I+G +G +A+++F +++ G P+ +T V+V SAC G +
Sbjct: 271 DSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAGLVN 330
Query: 240 LALQVHKYV---FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE--IDQPNVSSWT 294
++ + + + + + L+DM G+ G +D AY E + P + T
Sbjct: 331 EGRRLFASIREEYHLVPGVEHNV----CLVDMLGRAGLLDEAYNFIKEEIPENPAPAILT 386
Query: 295 SMI 297
+M+
Sbjct: 387 AML 389
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 266/500 (53%), Gaps = 53/500 (10%)
Query: 8 ISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL--------- 58
I L++LR K HP L L +F I L TH VA++L
Sbjct: 4 IVLNTLRFK--HPKLALLQSCSSFSDLKIIHGF--LLRTHLISDVFVASRLLALCVDDST 59
Query: 59 -SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
+K TNLL YA+ I + + + F +N +IR ++ P KA Y M ++ +
Sbjct: 60 FNKPTNLLG----YAYGIFSQIQNP--NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI 113
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS---------- 167
PD T P ++KAS ++ + +G Q HS VR G +++ + E+ + +Y+
Sbjct: 114 WPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGR 173
Query: 168 ---------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
K G E AR++FDE P R L +W+ +I G +++ ++A
Sbjct: 174 IFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKA 233
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F +K+ G ++ MVSV S+C LG LE + ++YV VKS + ++ +L+
Sbjct: 234 IDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV--VKSHMTVNLILGTALV 291
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ +CG ++ A VF + + + SW+S+I G A +G A++A+ F M G P V
Sbjct: 292 DMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF VLSAC HGG V++G +E MK + IEPR HYGC+VD+LGRAG L EA +
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK 411
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M +K N I G L+GAC+ + N ++ E V L +++P G YV+LSNIYA G W+++
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
E +R +MK + + K P +SL
Sbjct: 472 ESLRDMMKEKLVKKPPGWSL 491
>gi|195614306|gb|ACG28983.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 216/385 (56%), Gaps = 7/385 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQL-FALEIGRQL 143
+F +N +R+ P + + G L P +T P +LKA+ +L +L + QL
Sbjct: 85 SFMFNTTLRVLASSPDPATTFPFFSRIHGTGALVPGRHTFPFLLKAAARLPLSLPVTEQL 144
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+LAVR G+ + + +G + YS AG AR+VFDE PER + +++ +Q+GR
Sbjct: 145 HALAVRHGVHLDAYVANGLVRAYSVAGLLRPARRVFDEVPERNATVYTTMVSAYAQNGRH 204
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACG--SLGDLELALQVHKYVFQVKSKQKSDTLM 261
++A+ F+ + + GFEP + SV SAC G LE+ VH V ++
Sbjct: 205 EDAMAAFVQMVRVGFEPGGAALASVLSACARSPSGGLEMGRHVHD--LMVARGVAVGPIL 262
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNV-SSWTSMIVGYAANGLANEALDCFHYMRESG 320
+L+DMY K G ++ A VF + + V ++W +I G A G ALD F M+ G
Sbjct: 263 GTALVDMYVKNGAIEEALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRMQREG 322
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ PN T VG LSAC H G + E + F M+N + I P HYGCMVDLLGRAGLL EA
Sbjct: 323 VPPNATTLVGALSACSHPGLLDEARRLFRSMENDFGIVPGIQHYGCMVDLLGRAGLLSEA 382
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
M+ M KA+ VIWG L+ AC+ G +++ E A + +L+P + G YVVLSN+YA
Sbjct: 383 EDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLDPSNHGVYVVLSNLYAEA 442
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V+++R VMK L+KIP S
Sbjct: 443 GRWQDVDKLRKVMKGARLSKIPGAS 467
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 219/380 (57%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I LY + E P KAL ++ M G L D T V A QL + +H AV
Sbjct: 201 WTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAV 260
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + + +Y+K G+ E+AR VFD ER SWN++++G +Q+GR +A+
Sbjct: 261 LNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALS 320
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +P+ VT + + SAC LG L ++H +V + SK DT + N+++DM
Sbjct: 321 LFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV--ISSKMDIDTTLRNAIMDM 378
Query: 269 YGKCGRMDLAYKVF--WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y KCG +D A ++F E+ + +VSSW +I GY +G EAL+ F M+ G+ PN +
Sbjct: 379 YMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDI 438
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF +LSAC H G + EG+ F M + + P HY CMVD+LGRAG L EA +++
Sbjct: 439 TFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKK 497
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P + + +WG L+ AC GN ++GE A +L +LEP G YV++SNIYA+ W+EV
Sbjct: 498 IPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEV 557
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
E +R MK R L K A+S+
Sbjct: 558 EMVRQNMKSRGLKKPAAFSV 577
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 139/260 (53%), Gaps = 2/260 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+F N ++R Y +A+D+YI+M R GV + +T P VLK G +H
Sbjct: 97 SFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHG 156
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
VR G S+ F E+ + +Y+K G+ A +VFD R + W A+I Q R +
Sbjct: 157 QVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLK 216
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F +++ GF D++T +SV SA G LGD +A+ VH Y V + D + NS+
Sbjct: 217 ALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYA--VLNGFIGDVSVGNSI 274
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG ++ A VF +++ N SW SM+ GY NG +AL F+ M+ S PN
Sbjct: 275 VGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNP 334
Query: 326 VTFVGVLSACVHGGKVQEGK 345
VT + ++SAC + G G+
Sbjct: 335 VTALIMVSACSYLGSKHLGR 354
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 240/464 (51%), Gaps = 38/464 (8%)
Query: 37 ISAASSFLDTHEDPAKIVATQL-SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRL 95
+ +A L+T E+P + L + N ++N R S S WN++I
Sbjct: 223 LDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYR----KSNSCVVVWNSLISG 278
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y +A ++ M + G+ D TL +L A L + G+Q+H+ A ++GL +
Sbjct: 279 YVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICD 338
Query: 156 EFCESGFISLYSK-------------------------------AGDFEKARKVFDENPE 184
S FI YSK +G E A+++F+ P
Sbjct: 339 NVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPS 398
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
+ L SWN++I GLSQ+G EA+D+F + K + + SV SAC S+ LEL Q+
Sbjct: 399 KSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQI 458
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
V SD ++ SL+D Y KCG +++ K+F + + + SW SM++GYA NG
Sbjct: 459 FARATVVG--LDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNG 516
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
EAL F+ MR +G+RP +TF GVLSAC H G V+EG +F +M+ Y I+P HY
Sbjct: 517 HGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHY 576
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
CMVDL RAG LEEA +++ MP +A+ +W ++ C G +GE VA+ + EL+P
Sbjct: 577 SCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDP 636
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+ GAYV LS+I+A+ G WE +R VM+ R + K P YS A
Sbjct: 637 ENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSWAN 680
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 65/375 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC---YTLPIVLKASCQLFALEIGRQLHS 145
WN++I Y R +P++A+ ++ ++ + C + L V+ A L ++ G+Q+H+
Sbjct: 137 WNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHA 196
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPE------------------- 184
+ +E + S I+LY K GD + A V + E P+
Sbjct: 197 RILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMND 256
Query: 185 ------RKLGS----WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
RK S WN++I+G + EA +F ++K G + D T+ ++ SAC S
Sbjct: 257 ARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSS 316
Query: 235 LGDLELALQVHKYVFQVK----------------------------SKQKS-DTLMLNSL 265
L + + Q+H Y +V S+ K+ DT++LNS+
Sbjct: 317 LCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSM 376
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I +Y G+++ A ++F + ++ SW SMIVG + NG EALD F M + +R N
Sbjct: 377 ITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNR 436
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
V+SAC ++ G+ F V ++ +VD + G +E R + +
Sbjct: 437 FNLTSVISACASISSLELGEQIFA-RATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFD 495
Query: 386 GMPMKANVVIWGCLM 400
M MK++ + W ++
Sbjct: 496 TM-MKSDEISWNSML 509
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 138/295 (46%), Gaps = 52/295 (17%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV- 148
N ++++YTR + A ++ M +C++ +++ ++ G + S+ +
Sbjct: 45 NRLLQMYTRCGSMTDAHKLFDEMPH----RNCFSWNTMIEG-----YMKSGNKERSIRLF 95
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ N++ + S ++KAG+ E AR++F+E P R WN++I +++G +EA+
Sbjct: 96 DMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVR 155
Query: 209 MFIGLKKCGFEP------DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+F K+ +P D + +V AC LG+++ Q+H + + + D+++
Sbjct: 156 LF---KELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARI--LIDNMELDSVLT 210
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPN-------------------------------VS 291
+SLI++YGKCG +D A+ V +++P+ V
Sbjct: 211 SSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVV 270
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
W S+I GY N EA F+ M++ G++ + T +LSAC Q GK
Sbjct: 271 VWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQ 325
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 52/255 (20%)
Query: 140 GRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G+QLH L + GL +S + + +Y++ G A K+FDE P R SWN +I G
Sbjct: 24 GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYM 83
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G + +I +F ++ + Y + V
Sbjct: 84 KSGNKERSIRLF----------------------------DMMSNKNDYSWNV------- 108
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ + K G M++A ++F E+ N W SMI YA NG EA+ F +E
Sbjct: 109 ------VFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIHSYARNGSPREAVRLF---KE 159
Query: 319 SGIRP------NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
+ P + V+ AC G++Q GK + + +E +++L G
Sbjct: 160 LNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARIL-IDNMELDSVLTSSLINLYG 218
Query: 373 RAGLLEEARAMVEGM 387
+ G L+ A ++ M
Sbjct: 219 KCGDLDSAHCVLNTM 233
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 16/179 (8%)
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
Q+H F+ K +S + N L+ MY +CG M A+K+F E+ N SW +MI GY
Sbjct: 26 QLHILFFK-KGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMIEGYMK 84
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+G ++ F M +V F G A G+++ + F M N +
Sbjct: 85 SGNKERSIRLFDMMSNKNDYSWNVVFSGFAKA----GEMEIARRLFNEMPNRNGVV---- 136
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMK------ANVVIWGCLMGACEKFGNVKMGEWV 415
+ M+ R G EA + + + + + + ++GAC G ++ G+ +
Sbjct: 137 -WNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQI 194
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 230/413 (55%), Gaps = 36/413 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + R +AL ++ M G D + V+ A +L G H L
Sbjct: 232 FTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGL 291
Query: 147 AVRLGLES-------------------------------NEFCESGFISLYSKAGDFEKA 175
A R GL S ++F + I+ Y K G + A
Sbjct: 292 AFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDA 351
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+++F P++ SW +I+G Q+ ++ EA+ +F ++ G +PD+VT+VSV SAC ++
Sbjct: 352 KELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNM 411
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LE +H+Y+ + Q + T++L SLIDMY KCG ++ A +VF +++ W
Sbjct: 412 SSLEQGKSMHEYI---REHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWN 468
Query: 295 SMIVGYAANGLANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++IVG A NGL ++LD F M S PN +TF GVLSAC H G V+EG+HFF++M++
Sbjct: 469 AVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQH 528
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HYGCMVDLLGRAG ++EA ++E MPM +V WG L+G+C K G+ ++GE
Sbjct: 529 KYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGE 588
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V + L L+P DG + +LSNIYAS G+W+ V+ +R MK ++ KIP S+
Sbjct: 589 RVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSV 641
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
S +SL+ + G ++ARKVFD + + +W A+I+ ++G+ EA+ +F ++ G+
Sbjct: 204 SSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWP 263
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQV---------------------------- 251
D+ MV V +AC L H F+
Sbjct: 264 VDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRL 323
Query: 252 -KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
S Q D NS+I Y K G + A ++F + + SWT+MI G N ++EAL
Sbjct: 324 FDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEAL 383
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F+ M+ GI+P+ VT V V+SAC + +++GK E ++ +Q ++D+
Sbjct: 384 TIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTITVILGTSLIDM 442
Query: 371 LGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ G LE A + + M + N VI G M
Sbjct: 443 YMKCGCLESALEVFDTMEERGTPCWNAVIVGLAM 476
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 151/377 (40%), Gaps = 79/377 (20%)
Query: 58 LSKCTNLLQLNQIYAHIIRT-HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
+ T LL L + H +R H++H +A F N +++ P L +Y MS A
Sbjct: 45 FTTSTRLLPLP--FHHSLRLLHVVHRPNA-FSCNMVLKAAREHGLPHLCLPLYASMSAA- 100
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
PDCYT I+ A A+E GRQ+H AVR G N + + +S+YS G AR
Sbjct: 101 --PDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDAR 158
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
KVFD P SWN I+A Q +A+ +F + + G
Sbjct: 159 KVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERG------------------- 199
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
++S++ ++G+ G +D A KVF +++ +V +WT+M
Sbjct: 200 ----------------------AAAVSSMVSLFGRRGMVDEARKVFDVVERKDVFTWTAM 237
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV-----------HGGKVQEGK 345
I + NG EAL F MR G + V V++AC HG + G
Sbjct: 238 ISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGL 297
Query: 346 -----------HFFEMMKNVYQIEPRFAHYGC--------MVDLLGRAGLLEEARAMVEG 386
H + NV F C M+ + G +++A+ +
Sbjct: 298 GSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTV 357
Query: 387 MPMKANVVIWGCLMGAC 403
MP K NV W ++ C
Sbjct: 358 MPDKDNVS-WTTMISGC 373
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 227/408 (55%), Gaps = 6/408 (1%)
Query: 62 TNLLQLNQIYAHIIRTHMLH---SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
T LL L+ I T L S +F +N++I+ ++ A+ Y M + ++
Sbjct: 46 TKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKFGFSLDAVLFYRRMLLSRIV 105
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P YT V+KA L L IG +HS G S+ F ++ I+ Y+K+ ARKV
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKV 165
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE P+R + +WN++I+G Q+G A EA+++F +++ EPD T VSV SAC LG L
Sbjct: 166 FDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSL 225
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ +H + V S + ++ SL++M+ +CG + A VF+ + + NV WT+MI
Sbjct: 226 DFGCWLHDCI--VGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMIS 283
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G EA++ FH M+ G+ PN VTFV VLSAC H G + EG+ F MK Y +
Sbjct: 284 GYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVV 343
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV-VIWGCLMGACEKFGNVKMGEWVAK 417
P H+ CMVD+ GR GLL EA V+G+ V +W ++GAC+ N +G VA+
Sbjct: 344 PGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAE 403
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L EP + G YV+LSN+YA G + VE +R VM R L K YS
Sbjct: 404 NLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYS 451
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+Q H+ V G + + ++L AG R++F + +N++I S+
Sbjct: 27 QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKF 86
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G + +A+ + + P T SV AC L L + VH +VF S SD+
Sbjct: 87 GFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFV--SGYASDSF 144
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +LI Y K +A KVF E+ Q ++ +W SMI GY NGLANEA++ F+ MRES
Sbjct: 145 VQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESR 204
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+ TFV VLSAC G + G + + I +V++ R G + A
Sbjct: 205 VEPDSATFVSVLSACSQLGSLDFGCWLHDCIVG-SGITMNVVLATSLVNMFSRCGDVGRA 263
Query: 381 RAMVEGMPMKANVVIWGCLM 400
RA+ M ++ NVV+W ++
Sbjct: 264 RAVFYSM-IEGNVVLWTAMI 282
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/413 (37%), Positives = 230/413 (55%), Gaps = 36/413 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + R +AL ++ M G D + V+ A +L G H L
Sbjct: 232 FTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGL 291
Query: 147 AVRLGLES-------------------------------NEFCESGFISLYSKAGDFEKA 175
A R GL S ++F + I+ Y K G + A
Sbjct: 292 AFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDA 351
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+++F P++ SW +I+G Q+ ++ EA+ +F ++ G +PD+VT+VSV SAC ++
Sbjct: 352 KELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISACTNM 411
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LE +H+Y+ + Q + T++L SLIDMY KCG ++ A +VF +++ W
Sbjct: 412 SSLEQGKSMHEYI---REHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPCWN 468
Query: 295 SMIVGYAANGLANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++IVG A NGL ++LD F M S PN +TF GVLSAC H G V+EG+HFF++M++
Sbjct: 469 AVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKLMQH 528
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HYGCMVDLLGRAG ++EA ++E MPM +V WG L+G+C K G+ ++GE
Sbjct: 529 KYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNEVGE 588
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V + L L+P DG + +LSNIYAS G+W+ V+ +R MK ++ KIP S+
Sbjct: 589 RVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSV 641
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 34/274 (12%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
S +SL+ + G ++ARKVFD + + +W A+I+ ++G+ EA+ +F ++ G+
Sbjct: 204 SSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWP 263
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQV---------------------------- 251
D+ MV V +AC L H F+
Sbjct: 264 VDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRL 323
Query: 252 -KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
S Q D NS+I Y K G + A ++F + + SWT+MI G N ++EAL
Sbjct: 324 FDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEAL 383
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F+ M+ GI+P+ VT V V+SAC + +++GK E ++ +Q ++D+
Sbjct: 384 TIFNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIRE-HQYTITVILGTSLIDM 442
Query: 371 LGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ G LE A + + M + N VI G M
Sbjct: 443 YMKCGCLESALEVFDTMEERGTPCWNAVIVGLAM 476
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 151/377 (40%), Gaps = 79/377 (20%)
Query: 58 LSKCTNLLQLNQIYAHIIRT-HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
+ T LL L + H +R H++H +A F N +++ P L +Y MS A
Sbjct: 45 FTTSTRLLPLP--FHHSLRLLHVVHRPNA-FSCNMVLKAAREHGLPHLCLPLYASMSAA- 100
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
PDCYT I+ A A+E GRQ+H AVR G N + + +S+YS G AR
Sbjct: 101 --PDCYTHTILAAACATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDAR 158
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
KVFD P SWN I+A Q +A+ +F + + G
Sbjct: 159 KVFDAGPVWDAVSWNTILAAYVQAEDVDQAVGVFARMPERG------------------- 199
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
++S++ ++G+ G +D A KVF +++ +V +WT+M
Sbjct: 200 ----------------------AAAVSSMVSLFGRRGMVDEARKVFDGVERKDVFTWTAM 237
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV-----------HGGKVQEGK 345
I + NG EAL F MR G + V V++AC HG + G
Sbjct: 238 ISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGLAFRAGL 297
Query: 346 -----------HFFEMMKNVYQIEPRFAHYGC--------MVDLLGRAGLLEEARAMVEG 386
H + NV F C M+ + G +++A+ +
Sbjct: 298 GSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDAKELFTV 357
Query: 387 MPMKANVVIWGCLMGAC 403
MP K NV W ++ C
Sbjct: 358 MPDKDNVS-WTTMISGC 373
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 224/413 (54%), Gaps = 37/413 (8%)
Query: 87 FHWNNII-RLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +NNII LY+ K A+ I+ + R G+ D Y+LP VLK+ L +G+Q+H
Sbjct: 79 FVYNNIIYALYS--SNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHC 136
Query: 146 LAVRLGLESNEFCESGFISLYS-----------------------------KAGDFEKAR 176
+ V GL+ N S I +YS K GD AR
Sbjct: 137 VGVVTGLDKNVSVCSSLIQMYSCYDVCSARKLFDEFGGNGCVLNAMIVAYVKVGDVSNAR 196
Query: 177 KVFDENPERK--LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
K+FD ER + SW A+I+G +Q EAI +F ++ +PD++ +++V SAC
Sbjct: 197 KLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACAD 256
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG L L +H Y+ K K + NSLIDMY K G + A ++F + + +WT
Sbjct: 257 LGALHLGEWIHNYI--EKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWT 314
Query: 295 SMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+MI G A +GL EAL F M +E ++PN VTF+ +LSAC H G V+ G+ +F M++
Sbjct: 315 TMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRS 374
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGCM+DLLGRAG L+EA+ MV MP +AN IWG L+ A + G+ ++ E
Sbjct: 375 RYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAE 434
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+HL LEP G Y +LSN YAS G W E +R VM+ + K+P S
Sbjct: 435 EALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSF 487
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 213/380 (56%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL ++ M R G+ D +TL VL A L L G Q H +
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 149 RLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR-AKEA 206
+ G N SG I LYSK G RKVF+E E L WN +++G SQ+ ++A
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDA 327
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSL 265
++ F ++ G+ P+D + V V SAC +L Q+H +KS S+ + + N+L
Sbjct: 328 LECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS--LALKSDIPSNRISVDNAL 385
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY KCG + A ++F + + N S SMI GYA +G+ E+L F +M E I P
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+ VLSAC H G+V+EG ++F MMK + IEP HY CM+DLLGRAG L EA ++
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIA 505
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + W L+GAC GN+++ A + +LEP + YVVLSN+YAS G WEE
Sbjct: 506 RMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEE 565
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R M+ R + K P S
Sbjct: 566 VATVRKFMRDRGVKKKPGCS 585
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I Y AL ++ M G+ D +TL V+ A C L IG QLHS+AV
Sbjct: 108 YNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGL-IG-QLHSVAV 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVF-DENPERKLGSWNAIIAGLSQDGRAKEAI 207
G +S + ++ Y K GD + A++VF R SWN++I Q +A+
Sbjct: 166 SSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKAL 225
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + G D T+ SV +A L DL LQ H + + Q S + + LID
Sbjct: 226 GLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSH--VGSGLID 283
Query: 268 MYGKC-GRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIRPNH 325
+Y KC G M KVF EI +P++ W +M+ GY+ N +AL+CF M+ G RPN
Sbjct: 284 LYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPND 343
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+FV V+SAC + +GK + R + ++ + + G L++AR + +
Sbjct: 344 CSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403
Query: 386 GM 387
M
Sbjct: 404 RM 405
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 43/299 (14%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK------------------- 177
L G+ LHSL ++ + + + + FI LYSK G ARK
Sbjct: 24 LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83
Query: 178 ------------VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
+FD+ PE L S+N +I+ + G A+ +F G+++ G + D T+
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTL 143
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+V +AC D+ L Q+H V S S + N+L+ YGK G +D A +VF+ +
Sbjct: 144 SAVITAC--CDDVGLIGQLHSVA--VSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199
Query: 286 DQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ SW SMIV Y + ++AL F M G+ + T VL+A + G
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259
Query: 345 KHFF-EMMKNVYQIEPRFAHYGC-MVDLLGR-AGLLEEARAMVEGMPMKANVVIWGCLM 400
F +++K + + +H G ++DL + G + + R + E + + ++V+W ++
Sbjct: 260 LQFHGQLIKTGFH---QNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLWNTMV 314
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 237/445 (53%), Gaps = 52/445 (11%)
Query: 65 LQLNQIYAHIIRTHMLHSYSAA------------------FHWNNIIRLYTRLEAPKKAL 106
L+L + + +LHSY++A WN++I Y + ++A
Sbjct: 72 LKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREAC 131
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
++ M R G L D +TL +L A Q LE GR +H L + G + + +Y
Sbjct: 132 ALFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMY 191
Query: 167 SKAGDFEKARKVF-------------------------------DENPERKLGSWNAIIA 195
SK GD AR+ F D PER SWN +I+
Sbjct: 192 SKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMIS 251
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
Q G+ EA+D++ ++ G PD+ T+V V SACG +GDL + VH Y+ +
Sbjct: 252 CYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRD--NIH 309
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D ++NSL+DMY KCG++D A ++F E+ NV SW +I G A +G A +A+ F
Sbjct: 310 NPDISLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRS 369
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M + P+ +TFV +LS+C HGG ++ G+H+FE M++VY ++ HY CMVDLLGR G
Sbjct: 370 MVRN-TSPDGITFVALLSSCSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRG 428
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LE+A +++ MPMK +VV+WG L+GAC GNVK+G+ V K L ELE S G +V++SN
Sbjct: 429 HLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGKQVIKQLLELEGISGGLFVLISN 488
Query: 436 IYASRGLWEEVERIRAVMKHRNLAK 460
+ WE+++R+R +MK R K
Sbjct: 489 LLYETNQWEDMKRLRKLMKERGTRK 513
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 167/352 (47%), Gaps = 39/352 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N I R Y + P++AL ++ M R GVLP+ +TLP V+KA + A + +H +A+
Sbjct: 13 YNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNALAVHGVAL 72
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG F + + Y+ AG +R+ FDE R + SWN++I G +Q G +EA
Sbjct: 73 KLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACA 132
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ GF D+ T+ S+ AC G+LE VH + S D ++ +L+DM
Sbjct: 133 LFGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVH--CLMLVSGSPVDLILGGALVDM 190
Query: 269 YGKCGRMDLAYKVF-----------------------------WEIDQP--NVSSWTSMI 297
Y KCG + +A + F W P N SW +MI
Sbjct: 191 YSKCGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMI 250
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
Y G +EALD + M+ G P+ T V VLSAC G + GK H + + N++
Sbjct: 251 SCYVQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLY-IRDNIH 309
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
P + ++D+ + G ++ A + M + NVV W ++G G
Sbjct: 310 N--PDISLINSLLDMYAKCGQVDTAIRLFREMCNR-NVVSWNVIIGGLAMHG 358
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 213/380 (56%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL ++ M R G+ D +TL VL A L L G Q H +
Sbjct: 208 WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLI 267
Query: 149 RLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR-AKEA 206
+ G N SG I LYSK G RKVF+E E L WN +++G SQ+ ++A
Sbjct: 268 KTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDA 327
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSL 265
++ F ++ G+ P+D + V V SAC +L Q+H +KS S+ + + N+L
Sbjct: 328 LECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHS--LALKSDIPSNRISVDNAL 385
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY KCG + A ++F + + N S SMI GYA +G+ E+L F +M E I P
Sbjct: 386 IAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTS 445
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+ VLSAC H G+V+EG ++F MMK + IEP HY CM+DLLGRAG L EA ++
Sbjct: 446 ITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIA 505
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + W L+GAC GN+++ A + +LEP + YVVLSN+YAS G WEE
Sbjct: 506 RMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEE 565
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R M+ R + K P S
Sbjct: 566 VATVRKFMRDRGVKKKPGCS 585
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I Y AL ++ M G+ D +TL V+ A C L IG QLHS+AV
Sbjct: 108 YNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGL-IG-QLHSVAV 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVF-DENPERKLGSWNAIIAGLSQDGRAKEAI 207
G +S + ++ Y K GD + A++VF R SWN++I Q +A+
Sbjct: 166 SSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKAL 225
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + G D T+ SV +A L DL LQ H + + Q S + + LID
Sbjct: 226 GLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSH--VGSGLID 283
Query: 268 MYGKC-GRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIRPNH 325
+Y KC G M KVF EI +P++ W +M+ GY+ N +AL+CF M+ G RPN
Sbjct: 284 LYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPND 343
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+FV V+SAC + +GK + R + ++ + + G L++AR + +
Sbjct: 344 CSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFD 403
Query: 386 GM 387
M
Sbjct: 404 RM 405
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 137/299 (45%), Gaps = 43/299 (14%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK------------------- 177
L G+ LHSL ++ + + + + FI LYSK G ARK
Sbjct: 24 LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83
Query: 178 ------------VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
+FD+ PE L S+N +I+ + G A+ +F G+++ G + D T+
Sbjct: 84 YAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTL 143
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+V +AC D+ L Q+H V S S + N+L+ YGK G +D A +VF+ +
Sbjct: 144 SAVITAC--CDDVGLIGQLHSVA--VSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM 199
Query: 286 DQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ SW SMIV Y + ++AL F M G+ + T VL+A + G
Sbjct: 200 GGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGG 259
Query: 345 KHFF-EMMKNVYQIEPRFAHYGC-MVDLLGR-AGLLEEARAMVEGMPMKANVVIWGCLM 400
F +++K + + +H G ++DL + G + + R + E + + ++V+W ++
Sbjct: 260 LQFHGQLIKTGFH---QNSHVGSGLIDLYSKCGGGMSDCRKVFEEI-TEPDLVLWNTMV 314
>gi|147818273|emb|CAN64718.1| hypothetical protein VITISV_026719 [Vitis vinifera]
Length = 499
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 229/415 (55%), Gaps = 32/415 (7%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ + + +N + R+Y P AL ++ M R G PD YT P +LKA L L G++
Sbjct: 49 HPSTYLYNTMFRVYAASPTPLHALLLHRHMFRHGPPPDTYTFPFLLKACSALAHLLKGQE 108
Query: 143 LHSLAVRLGLESNEFCESGFISLY-------------------------------SKAGD 171
LH A++ GL + F E+ I LY + +
Sbjct: 109 LHCQALKFGLGGHVFVENSLIHLYGSNSRMDSARRVFDGMGYRDIASWTTLLACYANSCS 168
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
E ARKVFDE PER + S++A++A + R +EA+++F L EP D ++SV A
Sbjct: 169 VEAARKVFDEMPERSVVSYSAMLAAYVRGNRFREALELFRELFSVKIEPSDSCVMSVLCA 228
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C +LG L++ V+ +V K D+ + +LIDM+ KCG ++ A VF + +V
Sbjct: 229 CANLGALDVGRWVYSFVCHSKGDY-VDSRIATALIDMFFKCGSIEHALLVFEGAKEKHVG 287
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
WT+M+ G A +GL + ++ F M +SGI+P+ VTFV +LS C H G V EG ++F+ M
Sbjct: 288 EWTAMLSGLAMHGLGEQLIEAFEKMVDSGIKPDEVTFVALLSGCSHSGLVNEGLYYFDRM 347
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
++ + +EP H+GC+VDLLGRAGL+++A ++ MP + N IWG L+ AC + NV++
Sbjct: 348 ESDFGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGALLNACRVYKNVEV 407
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
GE A+ L + EPW+ Y+ L ++Y G W+EVE+++ MK K P SL
Sbjct: 408 GELAAQWLIKDEPWNGALYMTLLSLYREAGRWDEVEKVKLKMKEVGCRKGPGCSL 462
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 248/452 (54%), Gaps = 32/452 (7%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML----------------HSYSAAF 87
LDT+ V + + + + +++AH+I+TH L S A
Sbjct: 54 LDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDAR 113
Query: 88 H------------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
H W +I Y++ +AL +++ M R+G P+ +T VL +
Sbjct: 114 HVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSS 173
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+GRQ+HS ++L E++ + S + +Y+K G +AR +F PER + S AII+
Sbjct: 174 GFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIIS 233
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +Q G +EA+++F L++ G + + VT SV +A L L+ QVH ++ ++S+
Sbjct: 234 GYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHL--LRSEV 291
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
S ++ NSLIDMY KCG + A ++F + + V SW +M+VGY+ +G E L+ F+
Sbjct: 292 PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNL 351
Query: 316 M-RESGIRPNHVTFVGVLSACVHGGKVQEGKH-FFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M E+ ++P+ VT + VLS C HGG +G F++M ++P HYGC+VD+LGR
Sbjct: 352 MIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGR 411
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVL 433
AG +E A V+ MP + + IWGCL+GAC N+ +GE+V L ++EP + G YV+L
Sbjct: 412 AGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVIL 471
Query: 434 SNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
SN+YAS G WE+V +R +M + + K P S
Sbjct: 472 SNLYASAGRWEDVRSLRNLMLKKAVTKEPGRS 503
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 229/414 (55%), Gaps = 39/414 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I+ Y + P+ AL ++ M +G+LPD +T + L +G+Q+H+
Sbjct: 180 YNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVY 239
Query: 149 R--LGLESNEFCESGFISLYSKAG--------------------------------DFEK 174
+ ++SN +S + +Y+K G +
Sbjct: 240 KNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINV 299
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARK+F+ ER + SW A+I+G SQ G+ EA+++F ++ G +PD+VT+V+V SAC
Sbjct: 300 ARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACAR 359
Query: 235 LGDLELALQV-HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG +L ++ H+Y+ Q +T++ +++DMY KCG +D A ++F + + + +
Sbjct: 360 LGAFDLGKRLYHQYIENGVFNQ--NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGF 417
Query: 294 --TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SMI G A +GL A+ F + +G++P+ VTFVGVL AC H G ++EGK FE M
Sbjct: 418 VFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESM 477
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
N Y I+P+ HYGCMVDLLGR G LEEA +V+ MP +AN VIW L+ AC GNVK+
Sbjct: 478 FNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKI 537
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GE + L E+E YV+LSNI A WEE ++R VM+ + K P +S
Sbjct: 538 GEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWS 591
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 159/295 (53%), Gaps = 33/295 (11%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR Y+R + P++A+ +Y+ M G+ P + +T P +L + +L +LE G ++HS
Sbjct: 76 FMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHS 135
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G ES+ F + I LYS G+ AR +FDE+ R L S+N +I G ++ + +
Sbjct: 136 HIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPES 195
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F ++ G PD+ T V++ S C L + + Q+H V++ S+ L+ +++
Sbjct: 196 ALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAI 255
Query: 266 IDMYGKCGRMDLAYKVF-----------W-----------EID----------QPNVSSW 293
+DMY KCG +++A +VF W EI+ + +V SW
Sbjct: 256 VDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISW 315
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
T+MI GY+ G +EAL+ F M GI+P+ VT V VLSAC G GK +
Sbjct: 316 TAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLY 370
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 140/301 (46%), Gaps = 9/301 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD---FEKARKVFDEN 182
+ L SC+ F + G Q+H+ + GL F S IS +S G + +R +F +
Sbjct: 13 LCLLESCKSF--KQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQI 70
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLGDLELA 241
L WN +I G S+ +EAI +++ + G P++ T + ++C L LE
Sbjct: 71 DCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPG 130
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+VH ++ +K +SD + N+LI +Y G ++LA +F E ++ S+ +MI GYA
Sbjct: 131 HEVHSHI--IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYA 188
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPR 360
AL F M+ SGI P+ TFV + S C + GK ++ KN+ I+
Sbjct: 189 EVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSN 248
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+VD+ + GL+ A + M + W ++ + G + + + H+
Sbjct: 249 ILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMH 308
Query: 421 E 421
E
Sbjct: 309 E 309
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 231/450 (51%), Gaps = 78/450 (17%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N +IR + ++ ++ M R + PD TLP VLK+ L + +GR LH
Sbjct: 104 FVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGG 163
Query: 147 AVRLGLESNEFCESGFISLY-----------------------------------SKAGD 171
++LGLE + F + +Y K GD
Sbjct: 164 VMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGD 223
Query: 172 FEKARKVFDENPERKLGSWNAI-------------------------------IAGLSQD 200
KA +F+ PER GSWN++ I G SQ+
Sbjct: 224 LSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQN 283
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G ++A+ MF + + G P+D+T+VS AC +G L++ ++H Y+ S+
Sbjct: 284 GDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYL-------SSNGF 336
Query: 261 MLN-----SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
LN +L+DMY KCG + A +VF E ++ +W+ MI G+A +G ++AL CF
Sbjct: 337 QLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVK 396
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M+ +GI P+ V F+ +L+AC H G V +G +FFE M+ Y IEP HY +VDLLGRAG
Sbjct: 397 MKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAG 456
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
L+EA + ++ MP+ + VIWG L AC N++M E A+ L +LEP G+YV LSN
Sbjct: 457 RLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSN 516
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+YA+ G WE+VER+R +MK+R + K P +S
Sbjct: 517 VYAAVGRWEDVERVRTLMKNRGVEKDPGWS 546
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 139/356 (39%), Gaps = 79/356 (22%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ + +P++ AS L L Q+H+ L SN + IS + A +
Sbjct: 39 PETHFIPLI-HASNTLPQLH---QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F L +NA+I GL+++ R + ++ F+ + + PD +T+ V + +L D+
Sbjct: 95 FRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDV 154
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF--------------WE 284
L +H V +K + D+ + SL+DMY K G + ++F W
Sbjct: 155 GLGRCLHGGV--MKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWN 212
Query: 285 I---------------------DQPNVSSWTSMIVGYAANGLAN---------------- 307
+ + N SW S+I G+ NG +
Sbjct: 213 VLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVS 272
Query: 308 ---------------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM- 351
+AL F M E G+RPN +T V L AC G +Q G+ +
Sbjct: 273 WTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLS 332
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMP---MKANVVIWGCLMGAC 403
N +Q+ +VD+ + G ++ A R VE + +V+IWG + C
Sbjct: 333 SNGFQLNRGIG--TALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 386
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 216/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ ++AL++Y+ M + G+ D YT V A +L+ GR +H + +
Sbjct: 339 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 398
Query: 149 RLGLESNEFCESGFIS-LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ GL+ + I+ YSK G E RKVFD ER + SW ++ SQ +EA+
Sbjct: 399 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 458
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F +++ GF P+ T SV +C SL LE QVH + K+ ++ + ++LID
Sbjct: 459 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL--CKAGLDTEKCIESALID 516
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A KVF +I P++ SWT++I GYA +GL +AL F M SGI+ N VT
Sbjct: 517 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 576
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VL AC HGG V+EG +F+ M++ Y + P HY C++DLLGR G L++A + M
Sbjct: 577 LLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM 636
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ N ++W L+G C GNV++GE A+ + + P YV+LSN Y G +E+
Sbjct: 637 PMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGL 696
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R VMK + + K P YS
Sbjct: 697 SLRNVMKDQGVKKEPGYS 714
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 178/387 (45%), Gaps = 58/387 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I T +A D+++ M P+ YTL V KA +L + +G+++ + A
Sbjct: 236 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 295
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAKEA 206
LG+E N + I +YSK G AR VFD N WNA+I+G SQ G ++EA
Sbjct: 296 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEA 355
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML---N 263
+++++ + + G D T SV +A + L+ VH V K D +++ N
Sbjct: 356 LELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL----KCGLDLMVVSVNN 411
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
++ D Y KCG ++ KVF +++ ++ SWT+++ Y+ + L EAL F MRE G P
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 471
Query: 324 NHVTFVGVLSAC-----------VHG------------------------GKVQEGKHFF 348
N TF VL +C VHG G + E F
Sbjct: 472 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 531
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEK 405
+ + N P + ++ + GL+E+A + M + KAN V C++ AC
Sbjct: 532 DKISN-----PDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH 586
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVV 432
G V+ G + + Q++E DG VV
Sbjct: 587 GGMVEEGLF---YFQQME---DGYGVV 607
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 5/318 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I T + M +G+LPD + ++++ L +LE+G+ +H+
Sbjct: 133 FSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQ 192
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V G ++ F + +++Y+K G E + VF+ E SWNA+I+G + +G EA
Sbjct: 193 IVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEA 252
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D+F+ +K P+ T+VSV+ A G L D+ + +V ++ + + L+ +LI
Sbjct: 253 FDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI--EGNVLVGTALI 310
Query: 267 DMYGKCGRMDLAYKVFWE--IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
DMY KCG + A VF I+ + W +MI GY+ +G + EAL+ + M ++GI +
Sbjct: 311 DMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 370
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T+ V +A +Q G+ M+ + + D + G LE+ R +
Sbjct: 371 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVF 430
Query: 385 EGMPMKANVVIWGCLMGA 402
+ M + ++V W L+ A
Sbjct: 431 DRMEER-DIVSWTTLVTA 447
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 9/247 (3%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+YSK +F A VFDE P+R + SW +I G ++ G + F + G PD
Sbjct: 110 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 169
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
++ +C L LEL VH + V + + SL++MY K G ++ +Y VF
Sbjct: 170 YSAIIQSCIGLDSLELGKMVHAQI--VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNM 227
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + N SW +MI G +NGL EA D F M+ PN T V V A V G
Sbjct: 228 MTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMG 287
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE------GMPMKANVVIWGC 398
K + + IE ++D+ + G L +AR++ + G+ N +I G
Sbjct: 288 KE-VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGY 346
Query: 399 LMGACEK 405
C +
Sbjct: 347 SQSGCSQ 353
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
++ V C G + A VH V + + K ++ N +Y KC A VF E
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ Q NV SWT MIVG +GL + F M SGI P+ + ++ +C+ ++ G
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186
Query: 345 KHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
K M + + FA + ++++ + G +E++ V M + N V W ++
Sbjct: 187 K-----MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEHNQVSWNAMI 240
Query: 401 GACEKFG 407
C G
Sbjct: 241 SGCTSNG 247
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + AL++ M +A V P+ T +L+ ALE G+++H +
Sbjct: 266 WTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYII 325
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + I++Y K G ++ARK+F + P R + +W A++ G +Q G EAID
Sbjct: 326 QSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAID 385
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G +PD +T S ++C S L+ +H+ + V + D + ++L+ M
Sbjct: 386 LFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL--VHAGYSLDVYLQSALVSM 443
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A VF ++ + NV +WT+MI G A +G EAL+ F M++ GI+P+ VTF
Sbjct: 444 YAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTF 503
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC H G V+EG+ F M Y I+P HY C VDLLGRAG LEEA ++ MP
Sbjct: 504 TSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMP 563
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +WG L+ AC +V+ GE A+++ +L+P DGAYV LSNIYA+ G +E+ E+
Sbjct: 564 FQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEK 623
Query: 449 IRAVMKHRNLAKIPAYS 465
+R VM+ R++ K P S
Sbjct: 624 VRQVMEKRDVVKEPGQS 640
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 180/353 (50%), Gaps = 13/353 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +++ I +++ W +I + +A Y M AG
Sbjct: 142 AKCGSLTDARRVFDGIRDRNIVS-------WTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T +L A L++G+++H + GLE + + +Y+K GD KA+ +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD+ PE+ + +W +IAG +Q G+ A+++ +++ P+ +T S+ C + L
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E +VH+Y+ Q S + ++N+LI MY KCG + A K+F ++ +V +WT+M+
Sbjct: 315 EHGKKVHRYIIQ--SGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVT 372
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV-YQI 357
GYA G +EA+D F M++ GI+P+ +TF L++C +QEGK + + + Y +
Sbjct: 373 GYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ +V + + G +++AR + M + NVV W ++ C + G +
Sbjct: 433 DVYLQ--SALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCAQHGRCR 482
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 147/285 (51%), Gaps = 12/285 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ +L +LE GR++H+ ++ G++ N + E+ +S+Y+K G AR+VFD +R
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I + EA + +K G +PD VT VS+ +A + L++ +VH
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ K+ + + + SL+ MY KCG + A +F ++ + NV +WT +I GYA G
Sbjct: 222 EI--AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQV 279
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH--- 363
+ AL+ M+++ + PN +T+ +L C ++ GK Y I+ +
Sbjct: 280 DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHR-----YIIQSGYGREIW 334
Query: 364 -YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++ + + G L+EAR + +P + +VV W ++ + G
Sbjct: 335 VVNALITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTGYAQLG 378
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 228/412 (55%), Gaps = 34/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y+R ++A+ + M G+ PD T+ VL A +L LE+GR LH L
Sbjct: 207 WTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVE 266
Query: 149 RLGLESNEFCESGFISLYSKAGDF--------------------------------EKAR 176
G+ ++E I +Y+K GDF + AR
Sbjct: 267 EKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+FDE R + ++N+++ G G+ +EA+ +F+ +++ D+ T+V++ +AC SLG
Sbjct: 327 SLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLG 386
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ +H + Q ++D + +L+DMY KCGR+D A VF + + +V +WT+M
Sbjct: 387 ALQQGRALHACIEQ--RLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAM 444
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A NG+ AL+ F+ MR G +PN V+++ VL+AC H + EG+ +F+ M+ +Y
Sbjct: 445 IAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYN 504
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I P+ HYGCM+DLLGR+GLL+EA +V+ MP++ N VIW ++ AC ++ + + A
Sbjct: 505 IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAA 564
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+HL +LEP DG YV L NIY WE +IR +M+ R + K YS T
Sbjct: 565 EHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSIT 616
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 193/451 (42%), Gaps = 78/451 (17%)
Query: 41 SSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE 100
S L H A+ + L C L+ YA + M S F ++ +R +R
Sbjct: 25 SGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPS---TFLFDTALRACSRAG 81
Query: 101 A-PKKALDIYIFMSRAGVLPDCYTLPIVLKASC---QLFALEIGRQLHSLAVRLGLESN- 155
+ P + ++ M RAGV PD +T + K S + +L + LH+ +R L S
Sbjct: 82 SDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA 141
Query: 156 EFCESGFISLYSKAGDFEKARKVFDE-------------------------------NPE 184
F + I +Y + G AR+ FDE P
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + SW ++IA S+ RA+EA+ F + G PD+VT+++V SAC L DLEL +
Sbjct: 202 RDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSL 261
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKC-------------------------------- 272
H V + K S+ L++ +LIDMY KC
Sbjct: 262 HLLV-EEKGMPTSENLVV-ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKH 319
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G +D+A +F E++ ++ ++ SM+ GY +G EAL F MR +R ++ T V +L
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
+AC G +Q+G+ ++ +E ++D+ + G ++EA + + M K +
Sbjct: 380 TACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRD 437
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
V W ++ G MG+ +H ++
Sbjct: 438 VHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|225437286|ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 468
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 214/381 (56%), Gaps = 3/381 (0%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
HS F N++IR ++ P IY M +LP+ +T P +LK+ L G
Sbjct: 69 HSKPHVFICNSLIRAFSHNHTPHTPFSIYTHMHSNSILPNNFTFPFLLKSLADFKGLSEG 128
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+ +H+ V+LG + + ++ +++Y+ GD +VFDE P R + SW +I G
Sbjct: 129 QCIHTHVVKLGQFDDIYVQNSLLNVYASCGDMGLCMRVFDEMPHRDVVSWTVLITGYRSA 188
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
R +A+ F ++ G P+ VTMV+ SAC G LE+ + +H+++ +S + D +
Sbjct: 189 ERYDDALIAFEQMQYAGVVPNHVTMVNALSACADFGALEMGVWIHEFI--RRSGWEFDVI 246
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ SLIDMYGKCGR++ VF + + NV +W S+I G A EA+ F+ M + G
Sbjct: 247 LGTSLIDMYGKCGRIEEGLVVFRSMKEKNVFTWNSLIKGLALARSGAEAVWWFYRMEQEG 306
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
I+ + VT + VL AC H G VQ G+ F +M Y+ P HY C++DLL RAG+L+E
Sbjct: 307 IKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDLLARAGILQE 366
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A ++ MP + N V+WG + C G++++ E+ A+ L ELEP + YV+LSNIYA
Sbjct: 367 AMEVMTRMPFEPNKVMWGAFLAGCRAHGDLELSEFAARKLVELEPGNGAYYVLLSNIYAE 426
Query: 440 RGLWEEVERIRAVMKHRNLAK 460
G W +VE++R +MK L K
Sbjct: 427 MGRWSDVEKVRRLMKEGGLTK 447
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 170/519 (32%), Positives = 247/519 (47%), Gaps = 86/519 (16%)
Query: 11 SSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQI 70
S L ++ +H + KT F + S +F T+ +P +
Sbjct: 21 SLLEIQQAHAFM---LKTGLFHDTFSASKLVAFAATNPEPKTVS---------------- 61
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH I + F N++IR Y P+ AL ++ M V PD Y+ VLKA
Sbjct: 62 YAHSILNRI--ESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV------------ 178
E GRQ+H L ++ L ++ F E+ I++Y ++G FE ARKV
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSW 179
Query: 179 -------------------FDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--------- 210
FDE ER + SWN +I+G + G KEA ++F
Sbjct: 180 NSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVV 239
Query: 211 -----------IG------------LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
+G L PD T+V+V SAC SLG L VH Y
Sbjct: 240 SWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVY 299
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ K + + + +L+DMY KCG++D A +VF + + +VS+W S+I G + +GL
Sbjct: 300 I--DKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGK 357
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+AL+ F M G +PN +TF+GVLSAC H G + + + FEMM +VY IEP HYGCM
Sbjct: 358 DALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCM 417
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDLLGR G EEA +V +P ++ L+GAC++FG ++ E +A L E P
Sbjct: 418 VDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRES 477
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
YV +SN+YAS G W+E +R M+ + K P S+
Sbjct: 478 SGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSM 516
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 249/475 (52%), Gaps = 68/475 (14%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHS------------------YSA----------AFHW 89
L C N+++L I+AH+I+ + S Y++ + +
Sbjct: 21 LQNCKNIVELKSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVKEPNGYLY 80
Query: 90 NNIIRLYTRLEAPKKALDIYIFM-------SRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
N +IR +T + A+ Y M S + PD +T P V+K+ L +G+Q
Sbjct: 81 NAMIRAHTHNKVYALAILFYKEMLRLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQ 140
Query: 143 LHSLAVRLGLESNEFCESGFISLYSK-------------------------------AGD 171
+H+ + G +SN E+ I +Y+K G
Sbjct: 141 VHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQ 200
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
KA +FD P R + SW A+I+G ++ G +A+ +F ++ G EPD+++++SV A
Sbjct: 201 MRKAGALFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPA 260
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C LG LE+ +H Y + +K T + N+L++MY KCG + AY++F ++ + +V
Sbjct: 261 CAQLGALEVGKWIHMYCDRNGLLRK--TSICNALMEMYSKCGCIGQAYQLFDQMSKGDVI 318
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW++MI G A +G A EA++ F M+++ I PN +TF+G+LSAC H G EG +F+ M
Sbjct: 319 SWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAGFWNEGLAYFDSM 378
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
Y IEP HYGC+VD+LGRAG L +A ++E MPMK + IWG L+ +C N+ +
Sbjct: 379 SKDYHIEPEVEHYGCLVDILGRAGRLSQALDVIEKMPMKPDSKIWGSLLSSCRTHSNLDI 438
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+HL+ELEP G YV+LSNIYA W+ V R+R ++K +++ K P SL
Sbjct: 439 AIIAMEHLEELEPDDTGNYVLLSNIYADLAKWDGVSRMRKLIKSKSMKKTPGSSL 493
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/413 (37%), Positives = 228/413 (55%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +AL +++ M +AG +PD TL V+ A L A GRQ+H+ V
Sbjct: 961 WNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVV 1020
Query: 149 R--------------------LGLESNEFC------------ESGFISLYSKAGDFEKAR 176
+ G C E+ I+ Y+++ + E A+
Sbjct: 1021 KSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQ 1080
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
VF + E+ + +WN +IA +Q+G +EA+ +F+ LK+ P T +V +ACG++
Sbjct: 1081 MVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVA 1140
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DL+L Q H +V F+ +SD + NSL+DMY K G +D KVF + + S
Sbjct: 1141 DLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS 1200
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVG+A NG A +AL F M S P+ VT +GVLSAC H G V+EG+ +F M
Sbjct: 1201 WNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMT 1260
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ I P HY CM+DLLGRAG L+E +++ M M+ + V+W L+G+C NV+MG
Sbjct: 1261 EDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMG 1320
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EW A L EL+P + G YV+LSN+YA G W +V R+R+ MKHR ++K P S
Sbjct: 1321 EWAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCS 1373
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 182/355 (51%), Gaps = 6/355 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y R AL ++ M + D TL VL A + + G ++H+ A+
Sbjct: 352 WNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAI 411
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKV--FDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G S+ ++ + +YSK G A ++ F+ ER SWN++I+G + ++ A
Sbjct: 412 KCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAA 471
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ ++ P+ T S +AC ++ L+ +Q+H Y+ ++ + D ++ + LI
Sbjct: 472 LYALTKMQS-EVTPNQSTFSSALAACANIFLLKQGMQIHAYM--IRKGYEIDDILRSVLI 528
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC + D + ++F +V W SMI G A +G LD F M++ GI+ + V
Sbjct: 529 DMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGIKADSV 588
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+G L +C+ G V+ G+ +F +M + I PR HY CM++LLG+ G + E VE
Sbjct: 589 TFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYECMIELLGKHGCMVELEDFVEH 647
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
MP + +W + C ++GN K+GE AK + + P + +V + ++ G
Sbjct: 648 MPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDG 702
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 154/328 (46%), Gaps = 40/328 (12%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ Y+ L A G Q+H+L + + + S + +Y+K E+AR+VF
Sbjct: 891 NAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVF 950
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+ PER + SWN++I Q+G EA+ +F+ + K GF PD+VT+ SV SAC L
Sbjct: 951 EAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADR 1010
Query: 240 LALQVHKYVFQVKSKQ-KSDTLMLNSLIDMYGKCGR------------------------ 274
QVH V VKS + + D ++ N+L+DMY KCGR
Sbjct: 1011 EGRQVHARV--VKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLIT 1068
Query: 275 -------MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
++ A VF ++ + NV +W +I YA NG EAL F ++ + P H T
Sbjct: 1069 GYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYT 1128
Query: 328 FVGVLSACVHGGKVQEGKH-FFEMMKNVYQIE--PRFAHY--GCMVDLLGRAGLLEEARA 382
+ VL+AC + +Q G+ ++K ++ + P + +VD+ + G +++
Sbjct: 1129 YGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAK 1188
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ E M + NV W ++ + G K
Sbjct: 1189 VFERMAARDNVS-WNAMIVGHAQNGRAK 1215
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 126/252 (50%), Gaps = 9/252 (3%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I + G AR++FD P R GSWNAII S+ G EA+ +F + G P D
Sbjct: 92 IESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKD 151
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
TM SV S C DL A Q+H ++ K +S+ ++ +L+D+YG C + A + F
Sbjct: 152 ATMASVLSCCAECLDLCGARQLHGHI--AKRDFQSNVILGTALVDVYGNCFLLADARRAF 209
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+I +PN SW ++ Y G+ + A+D F M +G+RP T + AC ++
Sbjct: 210 DDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALE 269
Query: 343 EGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
EG+ H F ++++ Y E +VD+ + G ++ A+++ PMK V+ +
Sbjct: 270 EGRCIHAF-VLRHGY--EHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVS 326
Query: 401 G--ACEKFGNVK 410
G +C + + K
Sbjct: 327 GLASCGRIADAK 338
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 163/361 (45%), Gaps = 40/361 (11%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN I+R Y A+D++ M AGV P YT+ + A ALE GR +H+
Sbjct: 217 AISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHA 276
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP---------------------- 183
+R G E + S + +Y+K G + A+ +F+ P
Sbjct: 277 FVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIAD 336
Query: 184 ---------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ER L SWNA++ G + A+ +F +++ E D +T+ SV SAC
Sbjct: 337 AKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTG 396
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK--VFWEIDQPNVSS 292
+ D+ +VH F +K S ++ N+L+ MY KCG + A + +F + + S
Sbjct: 397 ILDIGKGEEVH--AFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYS 454
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MM 351
W S+I GY + ++ AL M +S + PN TF L+AC + +++G M+
Sbjct: 455 WNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMI 513
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ Y+I+ ++D+ + + + + E P + +V++W ++ C G +
Sbjct: 514 RKGYEIDDIL--RSVLIDMYCKCRQFDYSIRIFEARPSR-DVILWNSMIFGCAYSGKGEY 570
Query: 412 G 412
G
Sbjct: 571 G 571
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 137/304 (45%), Gaps = 6/304 (1%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N F + +S +++ G AR +F P+ S+NA+IA L+Q R +A+ +
Sbjct: 825 NTFSYNALLSAHARLGRPADARALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMH 884
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
F + + S SAC + D +QVH V KS D + ++L+DMY KC
Sbjct: 885 ADDFVLNAYSFASALSACAAEKDSRTGVQVHALV--SKSPHAKDVYIGSALLDMYAKCEW 942
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A +VF + + N+ SW S+I Y NG EAL F M ++G P+ VT V+SA
Sbjct: 943 PEEARRVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSA 1002
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C +EG+ + + +VD+ + G AR + + M ++ VV
Sbjct: 1003 CAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRS-VV 1061
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L+ + NV+ + V + E A+ VL YA G EE R+ +K
Sbjct: 1062 SETSLITGYARSANVEDAQMVFSQMVEKNVI---AWNVLIAAYAQNGEEEEALRLFVRLK 1118
Query: 455 HRNL 458
++
Sbjct: 1119 RESV 1122
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 112/279 (40%), Gaps = 33/279 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II +R P +AL ++ M+ G+ P T+ VL + L RQLH
Sbjct: 119 WNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGARQLHGHIA 178
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +SN + + +Y AR+ FD+ E SWN I+ G A+D
Sbjct: 179 KRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVD 238
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + G P T+ AC LE +H +V ++ + + +S++DM
Sbjct: 239 MFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFV--LRHGYEHHVHVRSSVVDM 296
Query: 269 YGKCGRMDLAY-------------------------------KVFWEIDQPNVSSWTSMI 297
Y KCG MD A +VF + + N+ SW +M+
Sbjct: 297 YAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAML 356
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
GY + AL F MR+ + +T VLSAC
Sbjct: 357 TGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 35/300 (11%)
Query: 24 RLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKC-------------TNLLQLNQI 70
R+ K+ FR+ + +S A +D + AK T+ ++C T+L+
Sbjct: 1018 RVVKSDRFREDMVLSNA--LVDMY---AKCGRTRAARCVFDRMASRSVVSETSLITGYAR 1072
Query: 71 YAHIIRTHMLHSY---SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
A++ M+ S WN +I Y + ++AL +++ + R V P YT V
Sbjct: 1073 SANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNV 1132
Query: 128 LKASCQLFALEIGRQLHSLAVR------LGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
L A + L++G+Q H ++ G ES+ F + + +Y K G + KVF+
Sbjct: 1133 LNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFER 1192
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
R SWNA+I G +Q+GRAK+A+ +F + PD VTM+ V SACG G +E
Sbjct: 1193 MAARDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEG 1252
Query: 242 LQVHKYVFQ---VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ + + + + Q T M ID+ G+ G + ++ E+ +P+ W S++
Sbjct: 1253 RRYFRSMTEDHGIIPSQDHYTCM----IDLLGRAGHLKEVEELIKEMSMEPDAVLWASLL 1308
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
++ WN++I Y R + AL M ++ V P+ T L A +F L+ G Q+H+
Sbjct: 452 SYSWNSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHA 510
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R G E ++ S I +Y K F+ + ++F+ P R + WN++I G + G+ +
Sbjct: 511 YMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEY 570
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+D+F ++K G + D VT + +C S G + L
Sbjct: 571 GLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRL 605
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 75/190 (39%), Gaps = 33/190 (17%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+KS ++T +LN+L+ Y + GR+ A +VF EI PN S+ +++ +A G +A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 311 DCFH-------------------------------YMRESGIRPNHVTFVGVLSACVHGG 339
FH M N +F LSAC
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ G ++ + + ++D+ + EEAR + E MP + N+V W L
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIG-SALLDMYAKCEWPEEARRVFEAMPER-NIVSWNSL 964
Query: 400 MGACEKFGNV 409
+ E+ G V
Sbjct: 965 ITCYEQNGPV 974
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T + N I+ CG + A ++F + + SW ++I + G +EAL F M
Sbjct: 85 TFLFNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNS 144
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
GIRP T VLS C + + + K +Q +VD+ G LL
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILG--TALVDVYGNCFLL 202
Query: 378 EEARAMVEGMPMKANVVIWGCLM 400
+AR + + ++ N + W ++
Sbjct: 203 ADARRAFDDI-LEPNAISWNVIV 224
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 220/372 (59%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + P+KAL++YI M+ +G++PD +T+ +L AS L +L G+++H +
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVL 364
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE + F +SLY G+ AR +FD E+ SWNA+I+G SQ+G ++A+
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L GF+P D+ +VSV AC L L + H Y +K+ D + S IDM
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYA--LKALLMEDVFVACSTIDM 482
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + + VF + +++SW ++I Y +G E+++ F MR+ G P+ TF
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L+ C H G V+EG +F M+N + IEP+ HY C++D+LGRAG L++A +V MP
Sbjct: 543 IGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMP 602
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + +W L+ C FG +++G+ VA+ L ELEP + YV LSN+YA G W++V R
Sbjct: 603 EQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRR 662
Query: 449 IRAVMKHRNLAK 460
+R ++K L K
Sbjct: 663 VRQMIKDIGLQK 674
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 30/326 (9%)
Query: 98 RLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNE 156
R E A+D+++ ++ D +T P V+KA +G +H + +++GL +
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--K 214
F + I++Y K G + A KVF P R L SWN+II+G S++G +K+ DM + +
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ G PD T+V+V C D+++ +++H VK D + NSL+DMY KCG
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHG--LAVKLGLSEDVRVNNSLVDMYSKCGY 184
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLS 333
+ A +F + ++ N SW +MI G G EA + F M+ + I N VT + +L
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244
Query: 334 AC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
AC +HG ++ G + E++ N + V + G+L A
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGF------------VAAYAKCGMLICAER 292
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGN 408
+ M K V W L+G C + G+
Sbjct: 293 VFYSMETKT-VNSWNALIGGCAQNGD 317
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN+II ++ K D+ + M G+LPD TL VL + +++G ++H L
Sbjct: 100 WNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGL 159
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV+LGL + + + +YSK G +A+ +FD+N + SWN +I GL G EA
Sbjct: 160 AVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEA 219
Query: 207 IDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
++F ++ + E ++VT++++ AC + L ++H Y ++ + D L+ N
Sbjct: 220 FNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGY--SIRHGFQYDELVANGF 277
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ Y KCG + A +VF+ ++ V+SW ++I G A NG +AL+ + M SG+ P+
Sbjct: 278 VAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDW 337
Query: 326 VTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
T +L A H ++ GK H F ++++ +I+ ++ L G AR +
Sbjct: 338 FTIGSLLLASAHLKSLRYGKEVHGF-VLRHGLEIDSFIGI--SLLSLYIHCGESSSARLL 394
Query: 384 VEGMPMKANV 393
+GM K++V
Sbjct: 395 FDGMEEKSSV 404
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 166/325 (51%), Gaps = 7/325 (2%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T+ +L A ++ L ++LH ++R G + +E +GF++ Y+K G A +VF
Sbjct: 238 TVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSM 297
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
+ + SWNA+I G +Q+G ++A++++I + G PD T+ S+ A L L
Sbjct: 298 ETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGK 357
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+VH +V ++ + D+ + SL+ +Y CG A +F +++ + SW +MI GY+
Sbjct: 358 EVHGFV--LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ 415
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
NGL +AL F + G +P+ + V VL AC ++ GK +E F
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFV 475
Query: 363 HYGC-MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
C +D+ ++G ++E+R++ +G+ K ++ W ++ A G+ + + + +++
Sbjct: 476 --ACSTIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVHGDGEESIELFERMRK 532
Query: 422 LEPWSDG-AYVVLSNIYASRGLWEE 445
+ DG ++ + + + GL EE
Sbjct: 533 VGQMPDGFTFIGILTVCSHAGLVEE 557
>gi|297733949|emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 218/403 (54%), Gaps = 41/403 (10%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+IR +++ E P K +++Y M A P+ +T ++ + L G Q+H V G
Sbjct: 1 MIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANG 60
Query: 152 LESNEFCESGFISLYS----------------------------------KAGDFEKARK 177
+N F + ++LY+ + GD + AR+
Sbjct: 61 YCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 120
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FDE PER + SW +IAG +Q GR K+A+ +F +++ G + D V +V+ SAC LGD
Sbjct: 121 IFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGD 180
Query: 238 LELALQVHKYVFQVKSKQKSDTL--MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L+L +H Y+ + L + NSLI MY CG +D AYKVF + Q + SWTS
Sbjct: 181 LKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTS 240
Query: 296 MIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
MI G+A G A EAL F +M+ G RP+ +TF+GVL AC H G V +G+HFFE M
Sbjct: 241 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 300
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ I PR HYGCMVDLL RAG L+EA ++E MPMK N +WG L+G C N ++
Sbjct: 301 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELA 360
Query: 413 EWVAKHLQ-ELEPWSDGAY-VVLSNIYASRGLWEEVERIRAVM 453
VA+ L EL+P Y V+LSN+YA+ W++V +R M
Sbjct: 361 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKM 403
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS-LA 147
W +I ++ K+AL ++ M RAGV D L L A +L L++G +HS +
Sbjct: 133 WTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYID 192
Query: 148 VRLGLESNEFCES---GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
RL + S I +Y+ G +KA KVF +R SW ++I G ++ G A+
Sbjct: 193 ERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAE 252
Query: 205 EAIDMFIGLKKCGFE---PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EA+ +F +++ G + PD +T + V AC G ++ ++ F+ +K+
Sbjct: 253 EALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQG----RHFFECMNKKWGIVPR 308
Query: 262 L---NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVG 299
+ ++D+ + G +D A+++ + +PN + W +++ G
Sbjct: 309 IEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGG 350
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 211/378 (55%), Gaps = 5/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ +TR +AL + M V P+ TL VL A L G+ +H
Sbjct: 187 WTALLSAFTRGGMFMEALGVLAEMD---VTPNEVTLASVLVACGNLGTARAGKAVHGWYF 243
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R E N + + +Y K + AR+VFD R + SW +I+GL Q R EA++
Sbjct: 244 RREKELNLIVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALE 303
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G +PD V + +V SAC SLG LE VH+Y+ + + D + S++DM
Sbjct: 304 VFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYI--ERKGIEWDVHVGTSVVDM 361
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A +F E+ NVSSW ++I G+A +G EALDCF M SG+ PN VTF
Sbjct: 362 YVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTF 421
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL AC H G VQEG+ FE+M Y++ P HYGCMVDLLGRAGL++EA +++ MP
Sbjct: 422 ITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMP 481
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ V W L+ AC+ G + + + H+ ELE +G YV+LSN+YA W +V +
Sbjct: 482 MRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDRWADVGK 541
Query: 449 IRAVMKHRNLAKIPAYSL 466
R M + + K P S+
Sbjct: 542 ARGFMNEKGMQKEPGSSV 559
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 167/321 (52%), Gaps = 13/321 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFA-LEI 139
A +N +I T P A + + + AG PD YTLP LKA +L L
Sbjct: 77 AHPFNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLRE 136
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G Q H++A + G ++ ++ Y G ARKVFDE ER + SW A+++ ++
Sbjct: 137 GCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTR 196
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G EA+ + L + P++VT+ SV ACG+LG VH + F + +++ +
Sbjct: 197 GGMFMEALGV---LAEMDVTPNEVTLASVLVACGNLGTARAGKAVHGWYF--RREKELNL 251
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++ N+L+DMY KC ++DLA +VF + ++ SWT MI G +EAL+ F+ M+ S
Sbjct: 252 IVGNALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQIS 311
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G++P+ V VLSAC G ++ G+ E ++ IE +VD+ + G L+
Sbjct: 312 GVKPDKVVLSTVLSACASLGALESGRWVHEYIER-KGIEWDVHVGTSVVDMYVKCGCLDT 370
Query: 380 ARAMVEGMPMKANVVIWGCLM 400
A ++ + MP+K NV W L+
Sbjct: 371 AVSIFQEMPLK-NVSSWNALI 390
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 231/411 (56%), Gaps = 33/411 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR ++ + P+++L +Y M + YT P +LKA L ALE Q+H+
Sbjct: 109 TFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHA 168
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA-- 203
+LG E++ + + I+ Y+ G+F+ A +FD P+ SWN++I G ++ G+
Sbjct: 169 QITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDI 228
Query: 204 -----------------------------KEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
KEA+ +F ++ EPD+V++ + SAC
Sbjct: 229 ALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQ 288
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG LE +H Y+ K++ + D+++ LIDMY KCG M A +VF I + +V +WT
Sbjct: 289 LGALEQGKWIHSYL--TKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWT 346
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
++I GYA +G EA+ F M++ GI+PN +TF VL+AC + G V+EGK F M+
Sbjct: 347 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERD 406
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
Y ++P HYGC+VDLL RAGLL+EA+ ++ MP+K N VIWG L+ AC N+++GE
Sbjct: 407 YNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 466
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + L ++P+ G YV +NI+A W++ R +MK + +AK+P S
Sbjct: 467 IGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCS 517
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 171/382 (44%), Gaps = 81/382 (21%)
Query: 141 RQLHSLAVRLGLESNEFCESGFIS--LYSKAGDF-EKARKVFD--ENPERKLGSWNAIIA 195
+Q+H+ ++ GL + + + F+S + S + DF A+ VFD + P+ L WN +I
Sbjct: 60 KQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL--WNLMIR 117
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G S + ++ ++ + C + T S+ AC +L LE Q+H + ++ +
Sbjct: 118 GFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYEN 177
Query: 256 -----------------------------KSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
K D + NS+I Y K G+MD+A +F ++
Sbjct: 178 DVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMV 237
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK- 345
+ N SWT+MI GY G+ EAL FH M+ S + P++V+ LSAC G +++GK
Sbjct: 238 EKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 297
Query: 346 -HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLLEEA---------------RAMVEG-- 386
H + + K +++ GC ++D+ + G + EA A++ G
Sbjct: 298 IHSY-LTKTRIRMDSVL---GCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYA 353
Query: 387 -----------------MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE---LEPWS 426
M +K NV+ + ++ AC G V+ G+ + +++ L+P
Sbjct: 354 YHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTI 413
Query: 427 DGAYVVLSNIYASRGLWEEVER 448
+ Y + ++ + GL +E +R
Sbjct: 414 E-HYGCVVDLLSRAGLLDEAKR 434
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 216/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ ++AL++Y+ M + G+ D YT V A +L+ GR +H + +
Sbjct: 393 WNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452
Query: 149 RLGLESNEFCESGFIS-LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ GL+ + I+ YSK G E RKVFD ER + SW ++ SQ +EA+
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F +++ GF P+ T SV +C SL LE QVH + K+ ++ + ++LID
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL--CKAGLDTEKCIESALID 570
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A KVF +I P++ SWT++I GYA +GL +AL F M SGI+ N VT
Sbjct: 571 MYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVT 630
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VL AC HGG V+EG +F+ M++ Y + P HY C++DLLGR G L++A + M
Sbjct: 631 LLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKM 690
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ N ++W L+G C GNV++GE A+ + + P YV+LSN Y G +E+
Sbjct: 691 PMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGL 750
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R VMK + + K P YS
Sbjct: 751 SLRNVMKDQGVKKEPGYS 768
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 178/387 (45%), Gaps = 58/387 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I T +A D+++ M P+ YTL V KA +L + +G+++ + A
Sbjct: 290 WNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCAS 349
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAKEA 206
LG+E N + I +YSK G AR VFD N WNA+I+G SQ G ++EA
Sbjct: 350 ELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEA 409
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML---N 263
+++++ + + G D T SV +A + L+ VH V K D +++ N
Sbjct: 410 LELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL----KCGLDLMVVSVNN 465
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
++ D Y KCG ++ KVF +++ ++ SWT+++ Y+ + L EAL F MRE G P
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525
Query: 324 NHVTFVGVLSAC-----------VHG------------------------GKVQEGKHFF 348
N TF VL +C VHG G + E F
Sbjct: 526 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 585
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEK 405
+ + N P + ++ + GL+E+A + M + KAN V C++ AC
Sbjct: 586 DKISN-----PDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSH 640
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVV 432
G V+ G + + Q++E DG VV
Sbjct: 641 GGMVEEGLF---YFQQME---DGYGVV 661
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 5/318 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I T + M +G+LPD + ++++ L +LE+G+ +H+
Sbjct: 187 FSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQ 246
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V G ++ F + +++Y+K G E + VF+ E SWNA+I+G + +G EA
Sbjct: 247 IVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEA 306
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D+F+ +K P+ T+VSV+ A G L D+ + +V ++ + + L+ +LI
Sbjct: 307 FDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGI--EGNVLVGTALI 364
Query: 267 DMYGKCGRMDLAYKVFWE--IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
DMY KCG + A VF I+ + W +MI GY+ +G + EAL+ + M ++GI +
Sbjct: 365 DMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSD 424
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T+ V +A +Q G+ M+ + + D + G LE+ R +
Sbjct: 425 LYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVF 484
Query: 385 EGMPMKANVVIWGCLMGA 402
+ M + ++V W L+ A
Sbjct: 485 DRMEER-DIVSWTTLVTA 501
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 110/247 (44%), Gaps = 9/247 (3%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+YSK +F A VFDE P+R + SW +I G ++ G + F + G PD
Sbjct: 164 VYSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFA 223
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
++ +C L LEL VH + V + + SL++MY K G ++ +Y VF
Sbjct: 224 YSAIIQSCIGLDSLELGKMVHAQI--VMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNM 281
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + N SW +MI G +NGL EA D F M+ PN T V V A V G
Sbjct: 282 MTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMG 341
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE------GMPMKANVVIWGC 398
K + + IE ++D+ + G L +AR++ + G+ N +I G
Sbjct: 342 KE-VQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGY 400
Query: 399 LMGACEK 405
C +
Sbjct: 401 SQSGCSQ 407
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 211 IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
IG+ + + ++ V C G + A VH V + + K ++ N +Y
Sbjct: 107 IGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYS 166
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
KC A VF E+ Q NV SWT MIVG +GL + F M SGI P+ +
Sbjct: 167 KCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSA 226
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEG 386
++ +C+ ++ GK M + + FA + ++++ + G +E++ V
Sbjct: 227 IIQSCIGLDSLELGK-----MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFN 280
Query: 387 MPMKANVVIWGCLMGACEKFG 407
M + N V W ++ C G
Sbjct: 281 MMTEHNQVSWNAMISGCTSNG 301
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 235/447 (52%), Gaps = 66/447 (14%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N+++R + P+K + +Y M + GV PD YT VLKA +L G +H VR
Sbjct: 81 NHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVR 140
Query: 150 LGLESNEFCESGFI-------------------------------SLYSKAGDFEKARKV 178
G NE+ ++ I S Y+K G ++A ++
Sbjct: 141 HGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 179 FDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEAI 207
FDE P E+ + +WNA+I+G G KEA+
Sbjct: 201 FDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNS 264
+F ++ G PD VT++S+ SAC LGDLE ++H Y+ + S S T + N+
Sbjct: 261 SIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG +D A +VF + ++S+W ++IVG A + A +++ F M+ + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALHH-AEGSVEMFEEMQRLKVWPN 379
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+GV+ AC H G+V EG+ +F +M+++Y IEP HYGCMVD+LGRAGLLEEA V
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFV 439
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
E M ++ N ++W L+GAC+ +GNV++G++ + L + G YV+LSNIYAS G W+
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 445 EVERIRAVMKHRNLAKIPAYSLATRLD 471
V+++R + + K SL D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGISLIEEDD 526
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 142/340 (41%), Gaps = 52/340 (15%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKI----VATQLSKCTNLLQLNQIYAHIIRTHMLHSY 83
T + K I A D D ++ + T KC + +++ ++
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVT-- 242
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
WN +I Y PK+AL I+ M AG PD T+ +L A L LE G++L
Sbjct: 243 -----WNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
Query: 144 H-----SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
H + +V + + I +Y+K G ++A +VF +R L +WN +I GL+
Sbjct: 298 HIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLIVGLA 357
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
A+ +++MF +++ P++VT + V AC G +V +K
Sbjct: 358 LH-HAEGSVEMFEEMQRLKVWPNEVTFIGVILACSHSG-------------RVDEGRKYF 403
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+LM DMY +PN+ + M+ GL EA F ++
Sbjct: 404 SLMR----DMYNI---------------EPNIKHYGCMVDMLGRAGLLEEA---FMFVES 441
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
I PN + + +L AC G V+ GK+ E + ++ + E
Sbjct: 442 MKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE 481
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 144/359 (40%), Gaps = 82/359 (22%)
Query: 142 QLHSLAVRLGLESN-----EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
Q+H+ V GL SN E S +S+ G + A K+F+E P+ + N ++ G
Sbjct: 30 QIHAFMVVNGLMSNLSVVGELIYSASLSV---PGALKYAHKLFEEIPKPDVSICNHVLRG 86
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL--------------------- 235
+Q + ++ + ++ ++K G PD T V AC L
Sbjct: 87 SAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLLN 146
Query: 236 --------------GDLELALQV-------HKYVFQVKS-----KQKSDTLM-------- 261
GDL +A ++ HK + + + K D M
Sbjct: 147 EYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPD 206
Query: 262 -----LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
N +I KC MD A ++F + +V +W +MI GY G EAL F M
Sbjct: 207 KDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEM 266
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGK----HFFEMMKNVYQIEPRFAHYGCMVDLLG 372
R++G P+ VT + +LSAC G ++ GK + E I + ++D+
Sbjct: 267 RDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYA 326
Query: 373 RAGLLEEARAMVEGMPMKA----NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ G ++ A + GM + N +I G + E G+V+M E +Q L+ W +
Sbjct: 327 KCGSIDRAIEVFRGMKDRDLSTWNTLIVGLALHHAE--GSVEMFE----EMQRLKVWPN 379
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 228/412 (55%), Gaps = 34/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y+R ++A+ + M G+ PD T+ VL A +L LE+GR LH L
Sbjct: 207 WTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVE 266
Query: 149 RLGLESNEFCESGFISLYSKAGDF--------------------------------EKAR 176
G+ ++E I +Y+K GDF + AR
Sbjct: 267 EKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVAR 326
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+FDE R + ++N+++ G G+ +EA+ +F+ +++ D+ T+V++ +AC SLG
Sbjct: 327 SLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLG 386
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ +H + Q ++D + +L+DMY KCGR+D A VF + + +V +WT+M
Sbjct: 387 ALQQGRALHACIEQ--RLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAM 444
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A NG+ AL+ F+ MR G +PN V+++ VL+AC H + EG+ +F+ M+ +Y
Sbjct: 445 IAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYN 504
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I P+ HYGCM+DLLGR+GLL+EA +V+ MP++ N VIW ++ AC ++ + + A
Sbjct: 505 IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAA 564
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+HL +LEP DG YV L NIY WE +IR +M+ R + K YS T
Sbjct: 565 EHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQVKKTAGYSSIT 616
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 193/451 (42%), Gaps = 78/451 (17%)
Query: 41 SSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE 100
S L H A+ + L C L+ YA + M S F ++ +R +R
Sbjct: 25 SGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMPPS---TFLFDTALRACSRAG 81
Query: 101 A-PKKALDIYIFMSRAGVLPDCYTLPIVLKASC---QLFALEIGRQLHSLAVRLGLESN- 155
+ P + ++ M RAGV PD +T + K S + +L + LH+ +R L S
Sbjct: 82 SDPHRPFLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRPHSLLLCTMLHAACLRTMLPSAA 141
Query: 156 EFCESGFISLYSKAGDFEKARKVFDE-------------------------------NPE 184
F + I +Y + G AR+ FDE P
Sbjct: 142 PFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPV 201
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + SW ++IA S+ RA+EA+ F + G PD+VT+++V SAC L DLEL +
Sbjct: 202 RDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSL 261
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKC-------------------------------- 272
H V + K S+ L++ +LIDMY KC
Sbjct: 262 HLLV-EEKGMPTSENLVV-ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKH 319
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G +D+A +F E++ ++ ++ SM+ GY +G EAL F MR +R ++ T V +L
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLL 379
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
+AC G +Q+G+ ++ +E ++D+ + G ++EA + + M K +
Sbjct: 380 TACASLGALQQGRALHACIEQRL-VEADIYLGTALLDMYMKCGRVDEATIVFQRMG-KRD 437
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
V W ++ G MG+ +H ++
Sbjct: 438 VHTWTAMIAGLAFNG---MGKAALEHFYQMR 465
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y ++ + A++ + M ++ V P+ YT V+ + L A + G Q+H +
Sbjct: 294 WTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVL 353
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLGL + + I+LYSK G + A VF + + SW+ II+ SQ G AKEA D
Sbjct: 354 RLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFD 413
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+++ G +P++ + SV S CGS+ LE QVH ++ + + ++ +++I M
Sbjct: 414 YLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDH--EAMVHSAIISM 471
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K+F + ++ SWT+MI GYA +G + EA++ F + G++P++V F
Sbjct: 472 YSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMF 531
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V G ++F +M NVY+I P HYGC++DLL RAG L EA ++ MP
Sbjct: 532 IGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMP 591
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ V+W L+ AC G+V G W A+ L +L+P S G ++ L+NIYA++G W+E
Sbjct: 592 FHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAH 651
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK + + K +S
Sbjct: 652 IRKLMKSKGVIKERGWS 668
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 144/296 (48%), Gaps = 4/296 (1%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R+ V D +T I LKAS L G+ +H+ ++ G + + F + ++Y+K G
Sbjct: 216 MWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGK 275
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ ++F++ + SW +I+ Q G + A++ F ++K P+ T +V S+
Sbjct: 276 PDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISS 335
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C +L + Q+H +V ++ + NS+I +Y KCG + A VF I + ++
Sbjct: 336 CANLAAAKWGEQIHGHVLRLGLVNALS--VANSIITLYSKCGLLKSASLVFHGITRKDII 393
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW+++I Y+ G A EA D +MR G +PN VLS C +++GK +
Sbjct: 394 SWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHL 453
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ I+ + ++ + + G ++EA + GM + +++ W ++ + G
Sbjct: 454 LCI-GIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKIN-DIISWTAMINGYAEHG 507
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 160/360 (44%), Gaps = 18/360 (5%)
Query: 63 NLLQLNQIYAHIIRTHML---------HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM- 112
N+L+LN +++ L ++ W +I Y +AL ++ M
Sbjct: 56 NMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMW 115
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
G D + + + LKA + G LH +V+ GL + F S I +Y K G
Sbjct: 116 VHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKI 175
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTS 230
E+ +VF++ R + SW AIIAGL G E + F + K G++ + S
Sbjct: 176 EQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKAS 235
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
A SL L +H +K + ++N+L MY KCG+ D ++F ++ P+V
Sbjct: 236 ADSSL--LHHGKAIHTQT--IKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDV 291
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SWT++I Y G A++ F MR+S + PN TF V+S+C + + G+
Sbjct: 292 VSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGH 351
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + + + ++ L + GLL+ A + G+ K +++ W ++ + G K
Sbjct: 352 VLRLGLVNA-LSVANSIITLYSKCGLLKSASLVFHGITRK-DIISWSTIISVYSQGGYAK 409
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/470 (32%), Positives = 249/470 (52%), Gaps = 67/470 (14%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAA-----------------------------FHWNN 91
CT + +QIY HII+T + + A+ + WN
Sbjct: 38 CTTINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNT 97
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
IIR ++R P+ A+ +++ M + + P T P V KA QL G QLH V+LG
Sbjct: 98 IIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLG 157
Query: 152 LESNEFCESGFISLYS-----------------------------------KAGDFEKAR 176
L++++F + I +Y+ K G+ +++R
Sbjct: 158 LQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESR 217
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+FD+ R SWN++I+G ++G+ EA+++F ++ GFE + TMVS+ +AC LG
Sbjct: 218 NLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLG 277
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ VH Y+ ++ + + +++ ++IDMY KCG ++ A +VF + +S W S+
Sbjct: 278 ALQHGKWVHDYI--KRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSI 335
Query: 297 IVGYAANGLANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
I+G A NG EA + F + S + +P+ V+F+GVL+AC H G + + + +FE+M N Y
Sbjct: 336 IIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKY 395
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+IEP HY C+VD+LG+AGLLEEA +++GMP+K + +IWG L+ +C K NV++
Sbjct: 396 EIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRA 455
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ + EL P YV++SN++A+ +EE R +MK K P S
Sbjct: 456 AQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCS 505
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 209/363 (57%), Gaps = 6/363 (1%)
Query: 106 LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
L Y M R VLP + ++L++ ++G H +++G E + ++G +
Sbjct: 15 LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74
Query: 166 YSKAGDFEKARKVFDENPERKLGS--WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
Y+K G E+AR +FD ER S WN +I+ Q G AI MF ++ +P +V
Sbjct: 75 YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQ-KSDTLMLNSLIDMYGKCGRMDLAYKVF 282
TMVS+ SAC LG L++ +H Y+ ++K+ K D ++ N+LIDMY KCG ++ A VF
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYI---RTKRLKIDVVLGNALIDMYCKCGALEAAIDVF 191
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + N+ W S+IVG NG EA+ F M + GI+P+ VTFVG+LS C H G +
Sbjct: 192 HGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLS 251
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G+ +F M VY +EP HYGCMVDLLGRAG L+EA ++ MPMK N ++ G L+ A
Sbjct: 252 AGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 311
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C+ + K+GE V + L EL+P G YV LSN+YAS W++V R +M R + K P
Sbjct: 312 CQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTP 371
Query: 463 AYS 465
S
Sbjct: 372 GCS 374
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 7/223 (3%)
Query: 78 HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFAL 137
+M S + WN +I Y + A+ ++ M V P T+ +L A L AL
Sbjct: 90 NMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGAL 149
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
++G +H L+ + + I +Y K G E A VF + + WN+II GL
Sbjct: 150 DMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGL 209
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+GR +EAI FI ++K G +PD VT V + S C G L + + V +
Sbjct: 210 GMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPG 269
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVG 299
++D+ G+ G + A ++ + +PN SM++G
Sbjct: 270 -VEHYGCMVDLLGRAGYLKEALELIRAMPMKPN-----SMVLG 306
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 247/480 (51%), Gaps = 69/480 (14%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIR-------------THMLHSYSAAFHW----------- 89
V +L C L +++ H++R H+ +++ H
Sbjct: 17 VMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPN 76
Query: 90 ----NNIIRLYTRLEAPKKALDIYIFMSRAGVLP-------DCYTLPIVLKASCQLFALE 138
N +I+ Y + + A+ +YI M R P D +T P +LKA ALE
Sbjct: 77 LHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALE 136
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN------- 191
+G+Q+H+ VR G +S+ ++ I +Y++AGD A KVFDE ER + SWN
Sbjct: 137 LGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHA 196
Query: 192 ------------------------AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
A+++G + G A+D F ++ GFEPDDV++V+
Sbjct: 197 RLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V AC LG LEL + Y + + + T + N+L++MY KCG +D A ++F +
Sbjct: 257 VLPACAQLGALELGRWI--YAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW+++I G AA+G A+EA+ F M + G +RPN +TFVG+LSAC + G V EG
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ M +VY +EP HYGC+VDLLGR+G + A +V MP+ A+ +WG L+ AC
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G+V A+ L ELEP G V+L+N+YA+ W +V R ++ R++ K P SL
Sbjct: 435 GDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 215/380 (56%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +A+ ++ M R G+ D +T+ VL A + L GRQ H + +
Sbjct: 211 WNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMI 270
Query: 149 RLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLS-QDGRAKEA 206
+ G N SG I LYSK AG + RKVF+E L WN +I+G S + +++
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDG 330
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-SL 265
+ F +++ GF PDD + V VTSAC +L L QVH +KS + + +N +L
Sbjct: 331 LWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVH--ALAIKSDVPYNRVSVNNAL 388
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG + A +VF + + N S SMI GYA +G+ E+L F M E I PN
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNS 448
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+ VLSACVH GKV+EG+ +F MMK + IEP HY CM+DLLGRAG L+EA ++E
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIE 508
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + W L+GAC K GNV++ A LEP++ YV+LSN+YAS WEE
Sbjct: 509 TMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEE 568
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++ +M+ R + K P S
Sbjct: 569 AATVKRLMRERGVKKKPGCS 588
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 19/275 (6%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N F + I+ Y+K AR+VFDE P+ + S+N +IA + G + +F ++
Sbjct: 74 NVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVR 133
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ D T+ V +ACG D+ L Q+H +V V + N+++ Y + G
Sbjct: 134 ELRLGLDGFTLSGVITACGD--DVGLVRQLHCFV--VVCGHDCYASVNNAVLACYSRKGF 189
Query: 275 MDLAYKVFWEIDQ---PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
+ A +VF E+ + + SW +MIV + EA+ F M G++ + T V
Sbjct: 190 LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASV 249
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRF---AHYGC-MVDLLGR-AGLLEEARAMVEG 386
L+A + G+ F MM I+ F +H G ++DL + AG + E R + E
Sbjct: 250 LTAFTCVKDLVGGRQFHGMM-----IKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEE 304
Query: 387 MPMKANVVIWGCLMGACEKFGNV-KMGEWVAKHLQ 420
+ ++V+W ++ + ++ + G W + +Q
Sbjct: 305 I-TAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQ 338
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
S CGSL + + + + +Y + N+LI+ Y K + +A +VF EI QP+
Sbjct: 55 SKCGSLHNAQTSFHLTQY---------PNVFSYNTLINAYAKHSLIHIARRVFDEIPQPD 105
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG-GKVQEGKHFF 348
+ S+ ++I YA G L F +RE + + T GV++AC G V++ F
Sbjct: 106 IVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLHCFV 165
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA--NVVIWGCLMGAC 403
+ + A C R G L EAR + M + V W ++ AC
Sbjct: 166 VVCGHDCYASVNNAVLAC----YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVAC 218
>gi|297817744|ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322593|gb|EFH53014.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 597
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 224/381 (58%), Gaps = 4/381 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN + + Y R + P +++ +Y M GV PD +T P V+KA QL L G LH+
Sbjct: 75 FLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAH 134
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G E + + +Y K G+ A +F+ + L +WNA IA Q G + A
Sbjct: 135 VLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIA 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F + + D T+VS+ SACG LG L++ ++ Y K + + + ++ N+ +
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEI--YDRARKEEIECNIIVENARL 252
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG + A +F ++ Q NV SW++MIVGYA NG + EAL F M+ G+RPN+V
Sbjct: 253 DMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMNGDSGEALALFTMMQNEGLRPNYV 312
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMK--NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+GVLSAC H G V EGK +F +M N +EPR HY CMVDLLGR+GLLEEA +
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVRLNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ M ++ + IWG L+GAC ++ +G+ VA L E P +V+LSNIYA+ G W+
Sbjct: 373 KKMRVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
V+++R+ M+ K+ AYS
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYS 453
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++H++ +R G + + GD AR+VFDE P+ ++ WN + G ++
Sbjct: 28 KKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEMPKPRIFLWNTLFKGYVRN 87
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
E++ ++ ++ G PD+ T V A LG L + +H +V +K+ + +
Sbjct: 88 QLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGVSLHAHV--LKNGFECLGI 145
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ L+ MY K G + A +F + ++ +W + I G + AL+ F+ M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGNSAIALEYFNKMCADA 205
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++ + T V +LSAC G + G+ ++ + +IE +D+ + G E A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLDIGEEIYDRARK-EEIECNIIVENARLDMHLKCGSTEAA 264
Query: 381 RAMVEGMPMKANVVIWGCLM 400
R + + M + NVV W ++
Sbjct: 265 RVLFDDMKQR-NVVSWSTMI 283
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 247/480 (51%), Gaps = 69/480 (14%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIR-------------THMLHSYSAAFHW----------- 89
V +L C L +++ H++R H+ +++ H
Sbjct: 17 VMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPN 76
Query: 90 ----NNIIRLYTRLEAPKKALDIYIFMSRAGVLP-------DCYTLPIVLKASCQLFALE 138
N +I+ Y + + A+ +YI M R P D +T P +LKA ALE
Sbjct: 77 LHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALE 136
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN------- 191
+G+Q+H+ VR G +S+ ++ I +Y++AGD A KVFDE ER + SWN
Sbjct: 137 LGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHA 196
Query: 192 ------------------------AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
A+++G + G A+D F ++ GFEPDDV++V+
Sbjct: 197 RLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V AC LG LEL + Y + + + T + N+L++MY KCG +D A ++F +
Sbjct: 257 VLPACAQLGTLELGRWI--YAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW+++I G AA+G A+EA+ F M + G +RPN +TFVG+LSAC + G V EG
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ M +VY +EP HYGC+VDLLGR+G + A +V MP+ A+ +WG L+ AC
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G+V A+ L ELEP G V+L+N+YA+ W +V R ++ R++ K P SL
Sbjct: 435 GDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 228/410 (55%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y R+E +AL +Y M AG P+ + ++ + A+ G+QL S V
Sbjct: 298 WGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVV 357
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
++G + +F +S I LY+ G ++A +
Sbjct: 358 KMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAME 417
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E PER + SW+ +I+G +Q+ + A+++F + G +P++VTMVSV SA + G
Sbjct: 418 LFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGT 477
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--PNVSSWTS 295
L+ H+YV S SD L ++IDMY KCG ++ A +VF+EI + VS W +
Sbjct: 478 LKEGRWAHEYVHN-NSITVSDNLSA-AIIDMYAKCGSINNALEVFYEIREKASTVSPWNA 535
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I G A +G AN +L F + I+ N +TF+GVL+AC H G V+ GK F MK+ +
Sbjct: 536 IICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEH 595
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
I+P HYGCMVDLLGRAG LEEA M+ MPMKA+VVIWG L+ AC GNV +GE
Sbjct: 596 SIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERA 655
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A++L LEP + V+LSN+YA G WE+ +R M+ + ++P YS
Sbjct: 656 AENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYS 705
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 61/366 (16%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+ +I +++ E +A++++ M GV+P+ T+ ++ A + R LH L +
Sbjct: 166 YTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVI 225
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG------- 201
++ E + + +Y +AR +FDE PE+ + SWN ++ G S+ G
Sbjct: 226 KMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSARV 285
Query: 202 ------------------------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG---- 233
R EA+ M+ + G+EP+DV MV + S CG
Sbjct: 286 VFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTMA 345
Query: 234 ------------SLG----DLELALQVHKYV---------FQVKSKQKSDTLMLNSLIDM 268
+G D + +H Y Q + K + N+LI
Sbjct: 346 MTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIAG 405
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + +D A ++F E+ + +V SW++MI GY N N AL+ FH M SGI+PN VT
Sbjct: 406 YVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTM 465
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSA G ++EG+ E + N I ++D+ + G + A + +
Sbjct: 466 VSVLSAIATSGTLKEGRWAHEYVHN-NSITVSDNLSAAIIDMYAKCGSINNALEVFYEIR 524
Query: 389 MKANVV 394
KA+ V
Sbjct: 525 EKASTV 530
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 64/274 (23%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYS----------------------------- 167
L G+Q+H L + GL SN F ++ I++Y
Sbjct: 82 LSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISG 141
Query: 168 --KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
K+G + A ++FDE P + S+ +I G SQ+ +A+++F ++ G P++VT+
Sbjct: 142 YVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTI 201
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
++ SA G + +H V +K + L+ +L+ MY C + A +F E+
Sbjct: 202 ATLVSAYSHFGGIWACRMLHGLV--IKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEM 259
Query: 286 DQPNVSSWTSMIVGYAANGLA-------------------------------NEALDCFH 314
+ N+ SW M+ GY+ G NEAL +
Sbjct: 260 PEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYR 319
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
M +G PN V V ++S C + EG+
Sbjct: 320 SMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLL 353
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 110/223 (49%), Gaps = 8/223 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W+ +I YT+ E P AL+++ M +G+ P+ T+ VL A L+ GR H
Sbjct: 428 FSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEY 487
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAK 204
+ ++ + I +Y+K G A +VF E E+ + WNAII GL+ G A
Sbjct: 488 VHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHAN 547
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--L 262
++ +F L++ + + +T + V +AC +G +E ++ +KS+ D +
Sbjct: 548 LSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESG---KRHFMSMKSEHSIDPDIKHY 604
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
++D+ G+ GR++ A ++ + + +V W +++ +G
Sbjct: 605 GCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHG 647
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
+++++ CG L D K +F V + SD + N +I Y K G++D A ++F
Sbjct: 106 SLINMYGKCGLLVDA-------KSIFDVCPR--SDPVSYNVMISGYVKSGQLDYACELFD 156
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
E+ S+T+MI+G++ N N+A++ F MR G+ PN VT ++SA H G +
Sbjct: 157 EMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWA 216
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGR----AGLLEEARAMVEGMPMKANVVIWGCL 399
+ ++ I+ F + + L R L EARA+ + MP K N+V W +
Sbjct: 217 CRMLHGLV-----IKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEK-NIVSWNVM 270
Query: 400 MGACEKFGNVKMGEWVAKHL--QELEPW 425
+ K G V V + + ++L W
Sbjct: 271 LNGYSKAGFVDSARVVFERIPNKDLVTW 298
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 229/406 (56%), Gaps = 10/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++L+ +++ + R M+ W ++I Y + + P++A+ + M + P
Sbjct: 98 KCGSVLEARKVFDEMRRKDMVS-------WTSLIAGYAQNDMPEEAIGLLPGMLKGRFKP 150
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ +T +LKA+ IGRQ+H+LAV+ + + S + +Y++ G + A VF
Sbjct: 151 NGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVF 210
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ + SWNA+I+G ++ G + A+ F + + GFE T SV S+ LG LE
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALE 270
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
VH ++ +KS+QK N+L+DMY K G M A KVF +D ++ +W +M+
Sbjct: 271 QGKWVHAHM--IKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTA 328
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+A GL EA+ F MR+SGI N VTF+ +L+AC HGG V+EGK +FEMMK Y +EP
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEP 387
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
H+ +V LLGRAGLL A + MP++ +WG L+ AC N K+G++ A H+
Sbjct: 388 EIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHV 447
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL+P G V+L NIYAS G W+ R+R +MK + K PA S
Sbjct: 448 FELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACS 493
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 165/335 (49%), Gaps = 11/335 (3%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A Q LE R++H+ + F ++ I LY K G +ARKVFDE + +
Sbjct: 58 ITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDM 117
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW ++IAG +Q+ +EAI + G+ K F+P+ T S+ A G+ D + Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIH-- 175
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
VK D + ++L+DMY +CG MD+A VF ++D N SW ++I G+A G
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
AL F M +G H T+ V S+ G +++GK M Q FA +
Sbjct: 236 TALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAG-NTL 294
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP--- 424
+D+ ++G + +AR + + + K ++V W ++ A ++G +G+ H +E+
Sbjct: 295 LDMYAKSGSMIDARKVFDRVDDK-DLVTWNTMLTAFAQYG---LGKEAVSHFEEMRKSGI 350
Query: 425 -WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ ++ + + GL +E +R +MK +L
Sbjct: 351 YLNQVTFLCILTACSHGGLVKEGKRYFEMMKEYDL 385
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 224/409 (54%), Gaps = 35/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +I Y ++ +KA+ +Y M GV PD T+ I L +SC + L G++ +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM-IGLVSSCSMLGDLNRGKEFYEYV 283
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW----------------- 190
GL + + ++SK GD +AR++FD +R + SW
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 191 --------------NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
NA+I G Q R ++A+ +F ++ +PD++TM+ SAC LG
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L++ + +H+Y+ K + + SL+DMY KCG + A VF I N ++T++
Sbjct: 404 ALDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G A+ A+ F+ M ++GI P+ +TF+G+LSAC HGG +Q G+ +F MK+ +
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ P+ HY MVDLLGRAGLLEEA ++E MPM+A+ +WG L+ C GNV++GE A
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
K L EL+P G YV+L +Y +WE+ +R R +M R + KIP S
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 174/356 (48%), Gaps = 38/356 (10%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL---PDCYTLPIVLKASCQLFALEIGRQL 143
F WN IR ++ E PK++ +Y M R G PD +T P++ K L +G +
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
++L LE + I +++ GD E ARKVFDE+P R L SWN +I G + G A
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
++AI ++ ++ G +PDDVTM+ + S+C LGDL + ++YV + + + ++N
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE--NGLRMTIPLVN 296
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL------------------ 305
+L+DM+ KCG + A ++F +++ + SWT+MI GYA GL
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 306 -------------ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+AL F M+ S +P+ +T + LSAC G + G ++
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
Y + A +VD+ + G + EA ++ G+ + N + + ++G G+
Sbjct: 417 K-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGV 331
+D + K+ I+ PN+ SW I G++ + E+ + M G RP+H T+ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH--YGCMVDLLGRAGLLEEARAMVEGMPM 389
C ++ H ++ +V ++ + + + G +E AR + + P+
Sbjct: 163 FKVCA-DLRLSSLGHM--ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPV 219
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+ ++V W CL+ +K G + +V K ++
Sbjct: 220 R-DLVSWNCLINGYKKIGEAEKAIYVYKLME 249
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 228/413 (55%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF----ALEIGRQLH 144
W I Y + KA ++ M A + P+ T I L ++C + ++ G +H
Sbjct: 59 WTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITF-ITLLSACAHYPSRSSISFGTAIH 117
Query: 145 SLAVRLGLESNE-FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+ +LGL+ N+ + I +Y+K G E AR FD+ R L SWN +I G ++G+
Sbjct: 118 AHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKF 177
Query: 204 KEAIDMFIGLK------------------------KC-------GFEPDDVTMVSVTSAC 232
++A+ +F GL +C G PD VT+++V +AC
Sbjct: 178 EDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAAC 237
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
+LG L L L VH+ V + +++ + NSLIDMY +CG +DLA +VF + Q + S
Sbjct: 238 ANLGTLGLGLWVHRLV--MTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVS 295
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W S+IVG+A NGLA+EAL F+ M+E G +P+ V++ G L AC H G + EG FE MK
Sbjct: 296 WNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMK 355
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
V +I PR HYGC+VDL RAG LEEA +++ MPMK N VI G L+ AC GN+ +
Sbjct: 356 RVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLA 415
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E V +L EL+ D YV+LSNIYA+ G W+ ++R MK R + K P +S
Sbjct: 416 ENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFS 468
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 4/252 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W +I + + + ++AL+ + M +GV PD T+ V+ A L L +G +H
Sbjct: 192 AISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHR 251
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L + +N + I +YS+ G + AR+VFD P+R L SWN+II G + +G A E
Sbjct: 252 LVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLADE 311
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F +++ GF+PD V+ AC G + L++ +++ +V+ + L
Sbjct: 312 ALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVR-RILPRIEHYGCL 370
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIR 322
+D+Y + GR++ A V + +PN S++ G A + +Y+ E SG
Sbjct: 371 VDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELDSGGD 430
Query: 323 PNHVTFVGVLSA 334
N+V + +A
Sbjct: 431 SNYVLLSNIYAA 442
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 116/247 (46%), Gaps = 39/247 (15%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG---SLGDLELALQVH 245
SW IA + G +A F+ +++ EP+ +T +++ SAC S + +H
Sbjct: 58 SWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAIH 117
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG- 304
+V ++ +D ++ +LIDMY KCGR++ A F ++ N+ SW +MI GY NG
Sbjct: 118 AHVRKL-GLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGK 176
Query: 305 ------------------------------LANEALDCFHYMRESGIRPNHVTFVGVLSA 334
EAL+CF M+ SG+ P++VT + V++A
Sbjct: 177 FEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAA 236
Query: 335 CVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
C + G + G + M ++ + ++ ++D+ R G ++ AR + + MP + +
Sbjct: 237 CANLGTLGLGLWVHRLVMTQDFRNNVKVSN--SLIDMYSRCGCIDLARQVFDRMPQRT-L 293
Query: 394 VIWGCLM 400
V W ++
Sbjct: 294 VSWNSII 300
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 35/147 (23%)
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG----------- 338
+ SWT+ I Y +G +A F MRE+ I PNH+TF+ +LSAC H
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 339 ------------GKVQEGKHFFEMMKNVYQIEP-----------RFAHYGCMVDLLGRAG 375
V G +M ++E + M+D R G
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGA 402
E+A + +G+P+K N + W L+G
Sbjct: 176 KFEDALQVFDGLPVK-NAISWTALIGG 201
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 228/412 (55%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + ++R+ M+ FH W +I + +A+D++ M
Sbjct: 203 NVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMR 262
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ G+ D YT VL A L AL+ G+++H+L +R G N F S + +Y K
Sbjct: 263 QEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVR 322
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF + + SW A++ G Q+G ++EA+ +F +++ G EPDD T+ SV S+C
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S S + N+LI +YGKCG ++ + ++F E+ + SW
Sbjct: 383 NLASLEEGAQFHCQA--LVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSW 440
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+++ GYA G ANE +D F M G++P+ VTF+ VLSAC G V+ G+ +FE M
Sbjct: 441 TALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK 500
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P HY CM+DL GRAG LEEA+ + MP + + W L+ +C +GN ++G+
Sbjct: 501 DHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGK 560
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A+ L EL+P + Y++LS+IYA++G W V ++R M+ + K P +S
Sbjct: 561 WAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFS 612
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 128/284 (45%), Gaps = 44/284 (15%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + +S YSK+GD +++F P R SWN++I+G G EA+ +
Sbjct: 68 QPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNS 127
Query: 213 LKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ K G + +T ++ S G ++L Q+H + VK + + +SL+DMY K
Sbjct: 128 MMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQI--VKFGFGAYVFVGSSLVDMYAK 185
Query: 272 CGRMDLAYKVFWEIDQPNVS-------------------------------SWTSMIVGY 300
G + +A +VF E+ + NV SWT+MI G
Sbjct: 186 MGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGL 245
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
NGL EA+D F MR+ G+ + TF VL+AC ++EGK ++ I
Sbjct: 246 IQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLI-----IRSG 300
Query: 361 FAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ H +VD+ + + A A+ + M K NVV W ++
Sbjct: 301 YNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANK-NVVSWTAML 343
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 222/378 (58%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++AL ++ M GV ++ L+A +L L+ G ++H L V
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+GL+SN + I++YSK + A VFDE R SWNA+I G +Q+G +++A+
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD T+VSV A + D A +H Y ++ Q D +L +LIDM
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ--DVYVLTALIDM 407
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+++A +F + +V +W +MI GY ++G A++ F M+ GI PN TF
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC H G V EG+ +F MK Y +EP HYG MVDLLGRAG L+EA A ++ MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M + ++G ++GAC+ NV++ E A+ + EL P +V+L+NIYA+ +W++V R
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVAR 587
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ L K P +S+
Sbjct: 588 VRTAMEKNGLQKTPGWSI 605
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 176/347 (50%), Gaps = 30/347 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN ++ Y R + A+++ + M G PD TL VL A AL R+ H+ A
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+R GLE + + Y K GD AR VFD P + SWNA+I G +Q+G ++EA+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + G + DV++++ ACG LG L+ ++VH+ + V+ S+ ++N+LI
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL--VRIGLDSNVSVMNALIT 305
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC R+DLA VF E+D+ SW +MI+G A NG + +A+ F M+ ++P+ T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365
Query: 328 FVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
V V+ A +HG ++ + ++VY + ++D+ + G
Sbjct: 366 LVSVIPALADISDPLQARWIHGYSIR-----LHLDQDVYVLT-------ALIDMYAKCGR 413
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
+ AR + + +V+ W ++ +G+ G+ + +E++
Sbjct: 414 VNIARILFNSARER-HVITWNAMI---HGYGSHGFGKAAVELFEEMK 456
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 8/306 (2%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
AL ++ MS AG P T +LK L GR +H+ G++S + +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDV 223
+Y+K AR+VFD P R +WNA++AG +++G A+ A++M + ++ + G PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+VSV AC + L + H F ++S + + +++D Y KCG + A VF
Sbjct: 163 TLVSVLPACANARALAACREAH--AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD 220
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ N SW +MI GYA NG + EAL F+ M E G+ V+ + L AC G + E
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCL 399
G E++ + ++ + ++ + + ++ A + + + + N +I GC
Sbjct: 281 GMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339
Query: 400 MGACEK 405
C +
Sbjct: 340 QNGCSE 345
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/480 (33%), Positives = 247/480 (51%), Gaps = 69/480 (14%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIR-------------THMLHSYSAAFHW----------- 89
V +L C L +++ H++R H+ +++ H
Sbjct: 17 VMARLRACVTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPN 76
Query: 90 ----NNIIRLYTRLEAPKKALDIYIFMSRAGVLP-------DCYTLPIVLKASCQLFALE 138
N +I+ Y + + A+ +YI M R P D +T P +LKA ALE
Sbjct: 77 LHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGGTAALE 136
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN------- 191
+G+Q+H+ VR G +S+ ++ I +Y++AGD A KVFDE ER + SWN
Sbjct: 137 LGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNMLISAHA 196
Query: 192 ------------------------AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
A+++G + G A+D F ++ GFEPDDV++V+
Sbjct: 197 RLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTEGFEPDDVSIVA 256
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V AC LG LEL + Y + + + T + N+L++MY KCG +D A ++F +
Sbjct: 257 VLPACAQLGALELGRWI--YAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQLFDGMAD 314
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW+++I G AA+G A+EA+ F M + G +RPN +TFVG+LSAC + G V EG
Sbjct: 315 KDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGLS 374
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
F+ M +VY +EP HYGC+VDLLGR+G + A +V MP+ A+ +WG L+ AC
Sbjct: 375 HFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSH 434
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
G+V A+ L ELEP G V+L+N+YA+ W +V R ++ R++ K P SL
Sbjct: 435 GDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRKAIRSRSMRKTPGCSL 494
>gi|356513527|ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g47530-like [Glycine max]
Length = 579
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/448 (35%), Positives = 238/448 (53%), Gaps = 37/448 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLH---------------------SYSAAF--- 87
+ V + + ++ +L QI+AHIIRT ++ SYS F
Sbjct: 4 ETVISAIKSVSHKTRLLQIHAHIIRTTLIQYPTVSLQFLSRIALSGPLQDASYSQRFFGQ 63
Query: 88 -------HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H+N +IR + ++P+K L +Y M R G+ D + +K+ + L G
Sbjct: 64 LSHPLVSHYNTMIRACSMSDSPQKGLLLYRDMRRRGIAADPLSSSFAVKSCIRFLYLPGG 123
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+H + G + + + + LYS A KVFDE P R +WN +I+ ++
Sbjct: 124 VQVHCNIFKDGHQWDTLLLTAVMDLYSLCQRGGDACKVFDEMPHRDTVAWNVMISCCIRN 183
Query: 201 GRAKEAIDMFIGLKKCGF--EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
R ++A+ +F ++ + EPDDVT + + AC L LE ++H Y+ + + D
Sbjct: 184 NRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGERIHGYIME---RGYRD 240
Query: 259 TLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
L L NSLI MY +CG +D AY+VF + NV SW++MI G A NG EA++ F M
Sbjct: 241 ALNLCNSLISMYSRCGCLDKAYEVFKGMGNKNVVSWSAMISGLAMNGYGREAIEAFEEML 300
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G+ P+ TF GVLSAC + G V EG FF M + + P HYGCMVDLLGRAGLL
Sbjct: 301 RIGVLPDDQTFTGVLSACSYSGMVDEGMSFFHRMSREFGVTPNVHHYGCMVDLLGRAGLL 360
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
++A ++ M +K + +W L+GAC G+V +GE V HL EL+ G YV+L NIY
Sbjct: 361 DKAYQLIMSMVVKPDSTMWRTLLGACRIHGHVTLGERVIGHLIELKAQEAGDYVLLLNIY 420
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+S G WE+V +R +MK++++ P S
Sbjct: 421 SSAGHWEKVAEVRKLMKNKSIQTTPGCS 448
>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
gi|194705708|gb|ACF86938.1| unknown [Zea mays]
gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
Length = 635
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 210/382 (54%), Gaps = 5/382 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDC-YTLPIVLKASCQLFALEIGRQL 143
F W+ I+ + R P+ AL IY M R G D +T L A+ GR+L
Sbjct: 125 FSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGREL 184
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H VR G++++ S +Y+K G + AR VFD P R + SW A++ GR
Sbjct: 185 HCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRD 244
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
E +F+ + + G P++ T V AC +L QVH + KS+ +
Sbjct: 245 GEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRM--AKSRTGDSCFAGS 302
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+ MY K G M A +VF + +P++ SWT+MI GYA NG +EAL CF + SG RP
Sbjct: 303 ALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRP 362
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+HVTFVGVLSAC H G V +G F +K+ Y IE HY C++DLL R+GL E A M
Sbjct: 363 DHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDM 422
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ MP+K N +W L+G C NV++ W A+ L E+EP + YV L+NIYAS GL+
Sbjct: 423 INTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVGLF 482
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
+EVE +R M+ R + K+PA S
Sbjct: 483 DEVENMRRTMELRGITKMPASS 504
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 145 SLAVRLGLESNEFCESGFI--SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+LA+ L S + C + +L AR +FD P R SW+AI++ + G+
Sbjct: 80 ALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHVRHGQ 139
Query: 203 AKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ A+ ++ L++ G D + ++ + + V+ +D ++
Sbjct: 140 PRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVV 199
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
++L DMY K GR+D A VF + +V SWT+M+ Y G E F M SGI
Sbjct: 200 WSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGI 259
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN T+ GVL AC + GK M + FA +V + + G + A
Sbjct: 260 LPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAG-SALVHMYSKYGDMGTAM 318
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGN 408
+ GMP K ++V W ++ + G
Sbjct: 319 RVFRGMP-KPDLVSWTAMISGYAQNGQ 344
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 221/372 (59%), Gaps = 3/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y + P +AL+I+ M + V PD L VL A L L+ GR +H+ V
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE ++Y+K G A+ +FD+ L WNA+I+G +++G A+EAID
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + PD +++ S SAC +G LE A +++YV +S + D + ++LIDM
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG--RSDYRDDVFISSALIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG ++ A VF +V W++MIVGY +G A EA+ + M G+ PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G V+EG FF M + ++I P+ HY C++DLLGRAG L++A +++ MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+ AC+K +V++GE+ A+ L ++P + G YV LSN+YA+ LW+ V
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 449 IRAVMKHRNLAK 460
+R MK + L K
Sbjct: 547 VRVRMKEKGLNK 558
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 6/316 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN IIR Y+R + AL +Y M A V PD +T P +LKA L L++GR +H+
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRAK 204
RLG +++ F ++G I+LY+K AR VF+ PER + SW AI++ +Q+G
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+++F ++K +PD V +VSV +A L DL+ +H V ++ + + D L+ S
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--S 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L MY KCG++ A +F ++ PN+ W +MI GYA NG A EA+D FH M +RP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
++ +SAC G +++ + +E + + F ++D+ + G +E AR +V
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS-SALIDMFAKCGSVEGAR-LV 380
Query: 385 EGMPMKANVVIWGCLM 400
+ +VV+W ++
Sbjct: 381 FDRTLDRDVVVWSAMI 396
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 222/378 (58%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++AL ++ M GV ++ L+A +L L+ G ++H L V
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+GL+SN + I++YSK + A VFDE R SWNA+I G +Q+G +++A+
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD T+VSV A + D A +H Y ++ Q D +L +LIDM
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ--DVYVLTALIDM 407
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+++A +F + +V +W +MI GY ++G A++ F M+ GI PN TF
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC H G V EG+ +F MK Y +EP HYG MVDLLGRAG L+EA A ++ MP
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M + ++G ++GAC+ NV++ E A+ + EL P +V+L+NIYA+ +W++V R
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVAR 587
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ L K P +S+
Sbjct: 588 VRTAMEKNGLQKTPGWSI 605
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 138/247 (55%), Gaps = 3/247 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN ++ Y R + A+++ + M G PD TL VL A AL R+ H+ A
Sbjct: 128 WNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREAHAFA 187
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+R GLE + + Y K GD AR VFD P + SWNA+I G +Q+G ++EA+
Sbjct: 188 IRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREAL 247
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + + G + DV++++ ACG LG L+ ++VH+ + V+ S+ ++N+LI
Sbjct: 248 ALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL--VRIGLDSNVSVMNALIT 305
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC R+DLA VF E+D+ SW +MI+G A NG + +A+ F M+ ++P+ T
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFT 365
Query: 328 FVGVLSA 334
V V+ A
Sbjct: 366 LVSVIPA 372
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 8/306 (2%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
AL ++ MS AG P T +LK L GR +H+ G++S + +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDV 223
+Y+K AR+VFD P R +WNA++AG +++G A+ A++M + ++ + G PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+VSV AC + L + H F ++S + + +++D Y KCG + A VF
Sbjct: 163 TLVSVLPACANARALAACREAH--AFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFD 220
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ N SW +MI GYA NG + EAL F+ M E G+ V+ + L AC G + E
Sbjct: 221 WMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDE 280
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCL 399
G E++ + ++ + ++ + + ++ A + + + + N +I GC
Sbjct: 281 GMRVHELLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339
Query: 400 MGACEK 405
C +
Sbjct: 340 QNGCSE 345
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 235/440 (53%), Gaps = 43/440 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC L +++ +I R ++ WN++I + + P++AL+++ M V
Sbjct: 182 AKCGELGLGYRVFVNIPRRDVVS-------WNSMITAFVQGGCPEEALELFQEMETQNVK 234
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T+ VL A + E GR +HS R + + + + +Y+K G E A+++
Sbjct: 235 PNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRL 294
Query: 179 FDENPERKL-------------------------------GSWNAIIAGLSQDGRAKEAI 207
FD+ PE+ + +WNA+I+ Q G+ KEA+
Sbjct: 295 FDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEAL 354
Query: 208 DMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
++F + L K +PD+VT+VS SAC LG ++L +H Y+ K K + + SL
Sbjct: 355 ELFHELQLSKTA-KPDEVTLVSTLSACAQLGAMDLGGWIHVYI--KKQGMKLNCHLTTSL 411
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG + A VF +++ +V W++MI G A +G +A+ F M+E ++PN
Sbjct: 412 IDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNA 471
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +L AC H G V+EG+ FF M+ VY + P HY CMVD+LGRAGLLEEA ++E
Sbjct: 472 VTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIE 531
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM +WG L+GAC NV + E L ELEP + GAYV+LSNIYA G W+
Sbjct: 532 KMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDR 591
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R +M+ L K P S
Sbjct: 592 VSGLRKLMRDVGLKKEPGCS 611
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 216/457 (47%), Gaps = 60/457 (13%)
Query: 8 ISLSSLRMKSSHP---LLHRLCKTHTFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTN 63
I+L++ R ++HP L+ + +T ++ H + F D I A LS +
Sbjct: 25 ITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPS 84
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCY 122
L Q++ I ++ + WN +IR Y P ++L I++ M ++ PD +
Sbjct: 85 LDYAQQVFDQIPHPNL-------YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T P ++KA+ +L L G+ H + +++ L S+ F + I Y+K G+ +VF
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P R + SWN++I Q G +EA+++F ++ +P+ +TMV V SAC D E
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257
Query: 243 QVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY- 300
VH Y ++ + ++L L N+++DMY KCG ++ A ++F ++ + ++ SWT+M+VGY
Sbjct: 258 WVHSY---IERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYA 314
Query: 301 ------AANGL------------------------ANEALDCFHYMRESGI-RPNHVTFV 329
AA G+ EAL+ FH ++ S +P+ VT V
Sbjct: 315 KIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLV 374
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-----MVDLLGRAGLLEEARAMV 384
LSAC G + G +VY I+ + C ++D+ + G L++A +
Sbjct: 375 STLSACAQLGAMDLGGWI-----HVY-IKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF 428
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
+ K +V +W ++ G+ K + +QE
Sbjct: 429 HSVERK-DVFVWSAMIAGLAMHGHGKDAIALFSKMQE 464
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/489 (33%), Positives = 255/489 (52%), Gaps = 37/489 (7%)
Query: 10 LSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQ 69
LSS +K+S L L K T + I + T +DP A +S C L NQ
Sbjct: 2 LSSTYVKASKKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYA-AAKIISFCA--LSSNQ 58
Query: 70 I-YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
+H R + + + F WN +IR + P+KA+ ++ M + LP+ YT +
Sbjct: 59 FSLSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLF 118
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD-------- 180
KA L L +G H +++LG E +F ++G + +++ G + ARK+FD
Sbjct: 119 KACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVI 178
Query: 181 -----------------------ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
+ PER SW+A+I G + G +EA+++F + G
Sbjct: 179 TWTALINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISG 238
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
F P+ +V +AC SLG L+ +H Y+ +++ D +M +LIDMY KCG +++
Sbjct: 239 FWPNHAGIVCAINACASLGALDQGRWIHCYI--KRNRMDLDRVMGAALIDMYAKCGCIEI 296
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A +F E+ +V +T +I G A +G + A++ F M G+ PN VTFV VL+AC
Sbjct: 297 ACSIFGELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSR 356
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V +G FE M +Y EP+ HYGC+VDLLGRAG LEEA+ +V+ MPMK + + G
Sbjct: 357 MGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLG 416
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ A +G+V++GE + L +L G +VVLSN+YAS W+EV R+R M +
Sbjct: 417 ALLNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKK 476
Query: 458 LAKIPAYSL 466
+ K+P SL
Sbjct: 477 VRKVPGCSL 485
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 228/377 (60%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + AL ++ M G P+ +TL ++K + + GRQ+H+
Sbjct: 143 WTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCW 202
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G SN F S + +Y++ G +A VFD+ + SWNA+IAG ++ G +EA+
Sbjct: 203 KYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALA 262
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ G+ P + T ++ S+C S+G LE +H ++ +KS QK + N+L+ M
Sbjct: 263 LFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHL--MKSSQKLVGYVGNTLLHM 320
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A KVF ++ + +V S SM++GYA +GL EA F M GI PN +TF
Sbjct: 321 YAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITF 380
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H + EGKH+F +M+ Y IEP+ +HY +VDLLGRAGLL++A++ +E MP
Sbjct: 381 LSVLTACSHARLLDEGKHYFGLMRK-YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP 439
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V IWG L+GA + N +MG + A+ + EL+P G + +L+NIYAS G WE+V +
Sbjct: 440 IEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAK 499
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 500 VRKIMKDSGVKKEPACS 516
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 125/243 (51%), Gaps = 2/243 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K L + + + PD +LK QL L+ G+ +H + + + ++
Sbjct: 56 KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y++ G E AR++FDE P R + SW ++I G +Q+ RA +A+ +F + G EP++
Sbjct: 116 LFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNE 175
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T+ S+ CG + Q+H + K S+ + +SL+DMY +CG + A VF
Sbjct: 176 FTLSSLVKCCGYMASYNCGRQIHACCW--KYGCHSNVFVGSSLVDMYARCGYLGEAMLVF 233
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
++ N SW ++I GYA G EAL F M+ G RP T+ +LS+C G ++
Sbjct: 234 DKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLE 293
Query: 343 EGK 345
+GK
Sbjct: 294 QGK 296
>gi|413920848|gb|AFW60780.1| pentatricopeptide repeat protein PPR986-12 [Zea mays]
Length = 478
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 215/385 (55%), Gaps = 7/385 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQL-FALEIGRQL 143
+F +N +R+ P A + + G L P +T P +LKA+ +L +L + QL
Sbjct: 85 SFMFNTTLRVLASSPDPATAFPFFSRIHGTGALVPGRHTFPFLLKAAARLPLSLPVTEQL 144
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+LAVR G+ + + +G + YS AG AR+VFDE PER + +++ +Q+GR
Sbjct: 145 HALAVRHGVHLDAYVANGLVRAYSVAGLLRPARRVFDEVPERNAAVYTTMVSAYAQNGRH 204
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACG--SLGDLELALQVHKYVFQVKSKQKSDTLM 261
++A+ F+ + + GFEP + SV SAC G LE+ VH V ++
Sbjct: 205 EDAMAAFVQMVRVGFEPCGAALASVLSACARSPSGGLEMGRHVHD--LMVARGVAVGPIL 262
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNV-SSWTSMIVGYAANGLANEALDCFHYMRESG 320
+L+DMY K G ++ A VF + + V ++W +I G A G ALD F M+ G
Sbjct: 263 GTALVDMYVKNGAIEEALAVFDGLPERRVPAAWNPLISGLANLGHGERALDFFRRMQREG 322
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ PN T VG LSAC H G + E + F M+ + I P HYGCMVDLLGRAGLL EA
Sbjct: 323 VPPNATTLVGALSACSHPGLLDEARRLFRSMEKDFGIVPGIQHYGCMVDLLGRAGLLSEA 382
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
M+ M KA+ VIWG L+ AC+ G +++ E A + +L P + G YVVLSN+YA
Sbjct: 383 EDMIREMSCKADTVIWGALLTACKNHGVIEIAERAAVEMLKLNPSNHGVYVVLSNLYAEA 442
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V+++R VMK L+KIP S
Sbjct: 443 GRWQDVDKLRKVMKGARLSKIPGAS 467
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 223/413 (53%), Gaps = 36/413 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + R + +AL ++ M R D + V+ A Q + G H L
Sbjct: 232 FTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGL 291
Query: 147 AVRLGLES-------------------------------NEFCESGFISLYSKAGDFEKA 175
+R GL S ++F + I+ Y K G E A
Sbjct: 292 VIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENA 351
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+F P++ SW+ +I+G Q+ ++ A+ +F ++ G PD+VT+VSV SAC +L
Sbjct: 352 MTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNL 411
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LE VH YV Q K TL+L SLIDMY KCG ++ A VF +++ W
Sbjct: 412 SALEKGKSVHDYVRQNKCYI---TLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWN 468
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++IVG A NGL ++L+ F M S PN +TF GVLSAC H G V+EG+HFF++M++
Sbjct: 469 AVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQH 528
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
YQI P HYGCMVDLLGRAG ++EA ++E MPM +V WG L+GAC K G ++GE
Sbjct: 529 KYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPMSPDVPAWGALLGACWKHGENEVGE 588
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V + L L+P DG +LSNIYA G+W+ V +R MK R++ K+ YS+
Sbjct: 589 RVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDLRDSMKQRHVPKVSGYSV 641
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N S +SL+ + G E+AR VFDE R + +W A+I+ ++ EA+ MF ++
Sbjct: 199 NATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMR 258
Query: 215 KCGFEPDDVTMVSVTSACG---------------------SLGDLELALQVHKY--VFQV 251
+ + D+ MVSV +AC SL +++ L +H Y V
Sbjct: 259 REMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVL-IHMYSCCLDV 317
Query: 252 KSKQK-------SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
+ ++ D NS+I Y K G ++ A +F + + SW++MI G N
Sbjct: 318 VAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNN 377
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
++ AL F MR G+RP+ VT V V+SAC + +++GK + ++ +
Sbjct: 378 QSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQ-NKCYITLVLG 436
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
++D+ + G LE A + M K N VI G M
Sbjct: 437 TSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIVGLAM 476
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 155/414 (37%), Gaps = 107/414 (25%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHML------------------------HSY---- 83
++ QL++C+++ L QI+ I + +L HS+
Sbjct: 5 SLLDAQLARCSSVRHLLQIHGQFIASGLLADAFAASRLLLFTSATRLLPFPIHHSFRLLR 64
Query: 84 ----SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
AF N +++ P L +Y + + PD YT PI+ A +
Sbjct: 65 LVRCPNAFSCNTLLKAALLAGMPHLCLPLYTSLPAS---PDTYTHPILAAACAARRDVSE 121
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
GRQ+ S A+R G + + + + +YS G AR+VFD P SWN I+A
Sbjct: 122 GRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSWNTILAAYVH 181
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G +A+ +F + K + T VS
Sbjct: 182 AGDVDQAVGVFARMPK-----RNATAVS-------------------------------- 204
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
S++ ++G+ G ++ A VF E + ++ +WT+MI + N + EAL F MR
Sbjct: 205 ----SMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRRE 260
Query: 320 GIRPNHVTFVGVLSAC-----VHGGKVQEGKHFFEMMKNVYQIEPRFAH-YGCMVDLLG- 372
+ V V++AC + G++ G + ++ I+ H Y C +D++
Sbjct: 261 MWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAA 320
Query: 373 -----------------------RAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
+ G +E A + MP K NV W ++ C
Sbjct: 321 RRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVS-WSTMISGC 373
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 225/413 (54%), Gaps = 36/413 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + R + +AL ++ M R D + V+ A Q ++ G+ H L
Sbjct: 232 FTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGL 291
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN------------------------ 182
+R GL S ++ I +YS D AR++FD
Sbjct: 292 VIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDA 351
Query: 183 -------PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
P + SW+ +I+G Q+ ++ +A+ +F ++ G PD+VT+VSV SAC +L
Sbjct: 352 MALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNL 411
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LE VH+Y+ K Q +L+L SLI+MY KCG ++ A + F +++ W
Sbjct: 412 SALEKGKSVHEYI---KQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWN 468
Query: 295 SMIVGYAANGLANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++IVG A NGL ++LD F M S PN +TF GVLSAC H G V EG+HFF++M++
Sbjct: 469 AVIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQH 528
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
YQI P HYGCMVDLLGRAG ++EA M++ MPM +V WG L+GAC K G ++GE
Sbjct: 529 RYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGE 588
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V + L +P DG +LSNIYA G+W+ V+ +R MK R++ K+ +S+
Sbjct: 589 RVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVSGHSV 641
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 156/413 (37%), Gaps = 84/413 (20%)
Query: 22 LHRLCKT-HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
L R C H + H A+ D ++ T S+ LL L + H +R L
Sbjct: 11 LARCCSARHLLQIHAQFIASGLLADAFAASRLLLFTSASR---LLPLP--FHHSLRLLRL 65
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
Y AF N +++ P L +Y + PD YT PI+ A + G
Sbjct: 66 VRYPNAFSCNTLLKSALIGGMPHLCLPLYASLPAP---PDSYTHPILAAACASRKDVIEG 122
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H+ AV G N + + I +YS G AR+VFD P SWN I+A
Sbjct: 123 RQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSWNTILAAYVHA 182
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +A+++F + K + T VS
Sbjct: 183 GDVDQAVEVFAQMPK-----RNATAVS--------------------------------- 204
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
S++ ++G+ G +D A +VF + ++ +WT+MI + N + EAL F MR
Sbjct: 205 ---SMVSLFGRRGMVDEARRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRER 261
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK----------------------HFFEMMKNVYQIE 358
+ V V+SAC +Q G+ H + +V+
Sbjct: 262 WHVDEPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAAR 321
Query: 359 PRFAHYGC--------MVDLLGRAGLLEEARAMVEGMPMKANV----VIWGCL 399
F C M+ + G +++A A+ MP K NV VI GC+
Sbjct: 322 RLFDSGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCV 374
>gi|357441857|ref|XP_003591206.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480254|gb|AES61457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 490
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 233/446 (52%), Gaps = 37/446 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 111
+I++ +S CT+L Q+ YA I H H F N+II+ ++ ++ +
Sbjct: 42 QILSHFVSVCTSLHQIP--YATTIFNHTHHPNILLF--NSIIKAHSSFPPFHQSFHFFNL 97
Query: 112 MSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M +LPD +T P +LKA+ L ++G+ LH+ LG + E G + +YS G
Sbjct: 98 MKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCG 157
Query: 171 DFEKARKVFDENPER-------------KLG------------------SWNAIIAGLSQ 199
E A KVFDE R K+G SWN +I+ L+Q
Sbjct: 158 KMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQ 217
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ EA +F + + GFEPDD T+V+V C LGD++ +H Y K +
Sbjct: 218 RKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYA-DGKGLLRKVI 276
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ NSL+D Y KCG ++ A+KVF E+ + NV SW +MI G NG ++ F M
Sbjct: 277 SVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARK 336
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ TFVGVL+ C H G V +G+ F+ M +++ P+ HYGC+VDLLGR G ++E
Sbjct: 337 GVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKE 396
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A ++ MP+ N +WG L+ AC G+ ++ E AK L LEP + G YV+LSN+YA
Sbjct: 397 AYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAE 456
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
W EVE++R +M+ + K P S
Sbjct: 457 ERKWNEVEKVRVLMQGVGIKKNPGQS 482
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 113/303 (37%), Gaps = 35/303 (11%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+H+ +R GL + S F+S+ + A +F+ + +N+II S
Sbjct: 27 QIHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFP 86
Query: 202 RAKEAIDMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
++ F +K PD+ T + A L D +L +H +V + + S
Sbjct: 87 PFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVE 146
Query: 261 MLNSLIDMYGKCGRMDLAYKVF----------WEI---------------------DQPN 289
+ L+++Y CG+M+ A KVF W I Q +
Sbjct: 147 I--GLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRS 204
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW MI A EA F M E G P+ T V VL C G V G+
Sbjct: 205 VVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHS 264
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ + +VD + G LE A + M K NVV W ++ G
Sbjct: 265 YADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEM-TKKNVVSWNAMISGLGLNGKG 323
Query: 410 KMG 412
++G
Sbjct: 324 ELG 326
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 250/468 (53%), Gaps = 60/468 (12%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHML-HSYSAA-------------------------- 86
V + L KC +L +L QI+A +I+T++L H ++ +
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 87 ----FHWNNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFAL 137
F + +I+ ++ P ++L +Y M +GV +++P VLKA +L A
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAF 125
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+ GRQ+H ++ L + F + + +Y G+ E AR+VFD P R + SWN++IAG
Sbjct: 126 DEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGY 185
Query: 198 SQDGRAKEAIDMFI-----GLKKC--------------GFEPDDVTMVSVTSACGSLGDL 238
+ G + A ++F L C G PD +VSV SA LG +
Sbjct: 186 LKAGEIELASELFDEMPERDLVSCNAMIDGYGKEMLSLGLRPDGPAIVSVLSAIADLGFV 245
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
E +H YV + + S + ++LIDMY KCG ++ AY VF I + N+ W SMI
Sbjct: 246 EEGKWLHAYV-SMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMI 304
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +GLA EALD F M I PN +TF+G+LS C HGG V+EG+ +FE M Y+I
Sbjct: 305 SGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKI 364
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
PR HYGCM+DL GRAG LE+A +++ MP +A+++ W ++ A K G++++G+ A
Sbjct: 365 VPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAAL 424
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL P +YV+LSNIYA G W++V +IR +M+ R + KI S
Sbjct: 425 RAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 472
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 236/440 (53%), Gaps = 13/440 (2%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVA--TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
H R + A S L +H +P + + T ++C L + +++ + + +
Sbjct: 132 HPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEM-------PHPST 184
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +I Y ++A+ + G+ PD +T VL A ++ L G +
Sbjct: 185 VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRA 244
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A + G+ + F + + LY K G+ KAR+VFD+ ++ +W A++ G + +G +EA
Sbjct: 245 AEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREA 304
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-L 265
+D+F+ ++ G PD + SAC LG L+L Q + V + D +L + L
Sbjct: 305 LDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA---IRMVDWDEFLDNPVLGTAL 361
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG A+ VF ++ + ++ W +MI+G G A M +SG++ N
Sbjct: 362 IDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLND 421
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TF+G+L +C H G +Q+G+ +F M +Y I PR HYGC+VDLL RAGLL+EA +++
Sbjct: 422 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLID 481
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM AN VI G L+G C+ N ++ E V L LEPW+ G YV+LSNIY++RG WE+
Sbjct: 482 DMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWED 541
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++R MK + + K+PA S
Sbjct: 542 AAKLRLDMKEKGVEKVPACS 561
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W N+I Y ++ ++ALD + M ++ V P+ YT V+ A L + G Q+H A+
Sbjct: 321 WTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHAL 380
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLGL + I+LYSK G ++A VFD + + SW+ II+ Q AKEA +
Sbjct: 381 RLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFN 440
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + G +P++ + SV S CGS+ LE QVH Y + +T++ ++LI M
Sbjct: 441 YLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDH--ETMVHSALISM 498
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + G + A K+F I ++ SWT+MI GYA +G + EA+ F + G+ P++VTF
Sbjct: 499 YSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTF 558
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L+AC H G V G +++++M N YQI P HYGC++DLL RAG L EA MV MP
Sbjct: 559 IGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMP 618
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ V+W L+ AC G++ W A+ + L P S GA++ L+NIY++ G EE
Sbjct: 619 FPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAH 678
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + + K P +S
Sbjct: 679 VRKLMKSKGVIKEPGWS 695
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 146/320 (45%), Gaps = 5/320 (1%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIG 140
S+ W N+I Y +AL ++ M +G+ D + + + LKA + G
Sbjct: 111 SHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFG 170
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
LH +V+ GL ++ F S + +Y K G E+ VF+ R + SW A+I GL
Sbjct: 171 ELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHA 230
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G + + + F + + D T A G L +H +K
Sbjct: 231 GCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQT--IKQGFNETAY 288
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
++N+L MY KC + D ++F ++ P+V SWT++I+ Y G ALD F MR+S
Sbjct: 289 VVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSD 348
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ PN TF V+SAC + + G+ + ++ + ++ L + GLL+EA
Sbjct: 349 VSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDA-LSVSNSIITLYSKCGLLQEA 407
Query: 381 RAMVEGMPMKANVVIWGCLM 400
+ +GM K +++ W ++
Sbjct: 408 SLVFDGMTRK-DIISWSTII 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMV 226
K G +AR +F++ R SW +IAG + EA+ +F + G + D +
Sbjct: 96 KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
AC ++ +H F VKS + + ++L+DMY K G+ + VF +
Sbjct: 156 VALKACALGMNVYFGELLHG--FSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMT 213
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
NV SWT++IVG G + + L F M S + + TF L A G + GK
Sbjct: 214 TRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGK 272
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 14/170 (8%)
Query: 241 ALQVHKYVFQVKSKQKSDTLM-------LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
A + ++Q K +Q++ T LNS + K G++ A +F ++ + SW
Sbjct: 59 ATECRDMIWQGKPEQRAPTAYYVPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISW 118
Query: 294 TSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEM 350
T++I GY +NEAL F M +SG++ + L AC G V G+ H F +
Sbjct: 119 TNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSV 178
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ I F +VD+ + G E+ ++ E M + NVV W ++
Sbjct: 179 KSGL--INSVFVS-SALVDMYMKVGKTEQGCSVFENMTTR-NVVSWTAVI 224
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/446 (35%), Positives = 234/446 (52%), Gaps = 46/446 (10%)
Query: 62 TNLLQLNQIYAHIIRTHMLHSYSA----------AFHWNNIIRLYTRLEAPKKALDIYIF 111
T LL+L H+ LHSY F W +IR Y +AL Y
Sbjct: 44 TKLLRLVTALPHV----PLHSYPRLLFSQLHTPNPFAWTALIRAYALRGPLSQALSFYSS 99
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAG 170
M + V P +T + A + +G QLH+ + LG S+ + + I +Y K G
Sbjct: 100 MRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCG 159
Query: 171 DFEKARKVFDENPER-------------KLG------------------SWNAIIAGLSQ 199
AR VFDE PER ++G +W A++ G +Q
Sbjct: 160 SLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQ 219
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ +A+++F L+ G E D+VT+V V SAC LG + A + +
Sbjct: 220 NAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNV 279
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L+ ++LIDMY KCG ++ AY VF + + NV S++SMIVG+A +G A A+ F+ M E+
Sbjct: 280 LVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLET 339
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G++PNHVTFVGVL+AC H G V +G+ F M+ Y + P Y CM DLL RAG LE+
Sbjct: 340 GVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEK 399
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A +VE MPM+++ +WG L+GA GN + E +K L ELEP + G Y++LSN YAS
Sbjct: 400 ALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYAS 459
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V ++R +++ +NL K P +S
Sbjct: 460 AGRWDDVSKVRKLLREKNLKKNPGWS 485
>gi|326520445|dbj|BAK07481.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 596
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 215/383 (56%), Gaps = 8/383 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F N ++R+ P+ AL ++ R PD +T P +L+A +L AL G LH+
Sbjct: 89 FSLNTVLRIAASSAHPRIALALH---RRRLAPPDTHTYPPLLQACTRLLALREGESLHAE 145
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAGLSQDGRAK 204
A + GL + F ++ + Y G FE A +VFDE P ER L SWN+++ G + +GR
Sbjct: 146 AAKNGLVALVFVKNSLVHHYGACGLFESAHRVFDEIPVLERNLVSWNSVMNGFAANGRPN 205
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
E + +F + PD T+VSV +AC +G L L +VH VF K ++ + N+
Sbjct: 206 EVLTIFRETLEADLMPDGFTIVSVLTACAEIGALTLGRRVH--VFASKVGLVGNSHVGNA 263
Query: 265 LIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
LID+Y KCG ++ A+KVF E+ V SWTS+IVG A NG +AL+ F M + P
Sbjct: 264 LIDLYAKCGGVEDAWKVFEEMGVARTVVSWTSLIVGLAGNGFGKDALELFGLMERERLIP 323
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T VGVL AC H G V +G +F M++ Y I P H GCMVDLLGRAG +EEA
Sbjct: 324 TDITMVGVLYACSHCGLVDDGFRYFNEMQDKYGIAPGIEHLGCMVDLLGRAGRVEEAHNY 383
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ MP++ N V+W L+GAC +++GE L EL+P G YV+LSN+YA+ G W
Sbjct: 384 ITTMPVEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVGRW 443
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
+ +R M + K P +SL
Sbjct: 444 ADAHVLRKTMATHGVRKNPGHSL 466
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 227/445 (51%), Gaps = 71/445 (15%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y + AL ++ M+ G PD YT P VLKA L +G Q+H V
Sbjct: 105 FNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVV 164
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI- 207
+LGL+ N + +G +S+Y K + AR+V DE P R + SWN+++AG +Q+GR +A+
Sbjct: 165 KLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALK 224
Query: 208 ------------------------------------DMFIGLKKCGF------------- 218
DMF+ LK+
Sbjct: 225 LCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNN 284
Query: 219 ------------------EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
EPD V++ SV ACG L L ++H+YV + K + + L
Sbjct: 285 AMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYV--ERKKLRPNLL 342
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+LIDMY KCG + A VF ++ +V SWTSMI Y +G +A+ F MR+SG
Sbjct: 343 LENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSG 402
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ + FV VL+AC H G V EG++ F +M Y I P HY CMVDLLGRAG ++EA
Sbjct: 403 FTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLGRAGKIDEA 461
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ MPM+ N +WG L+ AC + ++ + A HL +L P G YV+LSNIYA
Sbjct: 462 YHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKA 521
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++VE +R++M + + KIP S
Sbjct: 522 GRWQDVETVRSIMNSKGIKKIPGNS 546
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 124/246 (50%), Gaps = 14/246 (5%)
Query: 55 ATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSR 114
A + C N+L + ++ + ++ WN +I +Y P +A+D+Y+ M
Sbjct: 247 AVTNTSCDNVLYVKDMFVKLKEKSLIS-------WNVMIAVYVNNAMPNEAVDLYLQMQV 299
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
GV PD ++ VL A L A +GR++H R L N E+ I +Y+K G ++
Sbjct: 300 HGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKE 359
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR VFD+ R + SW ++I+ G+ K+A+ +F ++ GF PD + VSV +AC
Sbjct: 360 ARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSH 419
Query: 235 LGDLELALQVHKYVFQVKSKQ--KSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVS 291
G ++ +Y F + ++ N ++D+ G+ G++D AY + ++ +PN
Sbjct: 420 AGLVDEG----RYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNER 475
Query: 292 SWTSMI 297
W S++
Sbjct: 476 VWGSLL 481
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 3/198 (1%)
Query: 141 RQLHS-LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
++LHS + + L N + Y+ G+ R +FDE ++ + +N +I
Sbjct: 55 KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+G ++A+ +F + GF PD+ T V AC G+L + LQ+H V VK +
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAV--VKLGLDMNL 172
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N L+ MYGKC +D A +V E+ ++ SW SM+ GYA NG N+AL M +
Sbjct: 173 YIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDL 232
Query: 320 GIRPNHVTFVGVLSACVH 337
++P+ T +L A +
Sbjct: 233 KLKPDAGTMGSLLPAVTN 250
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 6/167 (3%)
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ Y CG +F EI NV + MI Y NGL +AL F M G P+
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEARA 382
+ T+ VL AC G + G ++ V ++ Y +V + G+ L+ AR
Sbjct: 137 NYTYPCVLKACSVSGNLWVG---LQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARR 193
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+++ MP + ++V W ++ + G + + +++L+ D
Sbjct: 194 VLDEMPGR-DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAG 239
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/440 (33%), Positives = 236/440 (53%), Gaps = 13/440 (2%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVA--TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
H R + A S L +H +P + + T ++C L + +++ + + +
Sbjct: 85 HPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEM-------PHPST 137
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +I Y ++A+ + G+ PD +T VL A ++ L G +
Sbjct: 138 VSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRA 197
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A + G+ + F + + LY K G+ KAR+VFD+ ++ +W A++ G + +G +EA
Sbjct: 198 AEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREA 257
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-L 265
+D+F+ ++ G PD + SAC LG L+L Q + V + D +L + L
Sbjct: 258 LDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA---IRMVDWDEFLDNPVLGTAL 314
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG A+ VF ++ + ++ W +MI+G G A M +SG++ N
Sbjct: 315 IDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLND 374
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TF+G+L +C H G +Q+G+ +F M +Y I PR HYGC+VDLL RAGLL+EA +++
Sbjct: 375 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLID 434
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM AN VI G L+G C+ N ++ E V L LEPW+ G YV+LSNIY++RG WE+
Sbjct: 435 DMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLSNIYSNRGRWED 494
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++R MK + + K+PA S
Sbjct: 495 AAKLRLDMKEKGVEKVPACS 514
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 245/436 (56%), Gaps = 26/436 (5%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNII-------------RLY 96
P + + + KCT L +L QI A+ I+T+ ++ + + N +L+
Sbjct: 25 PLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLF 84
Query: 97 TRLEAPKKALDIYIFMSRA-GVLPDCYTLPI----VLKASCQLFALEIGRQLHSLAVRLG 151
++ P L + M+R L D + L+ ++ AL G+QLH AV+LG
Sbjct: 85 DQITQPNIVL--FNTMARGYARLNDPLRMITHFRRCLRLVSKVKALAEGKQLHCFAVKLG 142
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
+ N + I++Y+ GD + +R+VFD+ E + ++NAII L+++ RA EA+ +F
Sbjct: 143 VSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFR 202
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV--FQVKSKQKSDTLMLNSLIDMY 269
L++ G +P DVTM+ V S+C LG L+L +H+YV + K +T +LIDMY
Sbjct: 203 ELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNT----TLIDMY 258
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG +D A VF ++ + + +W+++IV YA +G +A+ + M++ ++P+ +TF+
Sbjct: 259 AKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFL 318
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
G+L AC H G V+EG +F M N Y I P HYGCMVDLLGRAG L+EA ++ +P+
Sbjct: 319 GILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPI 378
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
K ++W L+ AC GNV+MG+ V + + EL+ G YV+ SN+ A G W++V +
Sbjct: 379 KPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHL 438
Query: 450 RAVMKHRNLAKIPAYS 465
R M + KIP S
Sbjct: 439 RKTMIDKGAVKIPGCS 454
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 218/380 (57%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +A++++ M R G+ D +T+ VL A + L G Q H + +
Sbjct: 211 WNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMI 270
Query: 149 RLGLESNEFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLSQ-DGRAKEA 206
+ G N SG I LYSK AG + RKVF+E L WN +I+G SQ + +++
Sbjct: 271 KSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDG 330
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-SL 265
I F ++ GF PDD + V VTSAC +L + QVH +KS + + +N +L
Sbjct: 331 IWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVH--ALAIKSDIPYNRVSVNNAL 388
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG + A +VF + + N+ S SMI GYA +G+ E+L F M + I PN
Sbjct: 389 VAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNT 448
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+ VLSACVH GKV+EG+ +F MMK ++IEP HY CM+DLLGRAG L+EA ++E
Sbjct: 449 ITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIE 508
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + W L+GAC K GNV++ A +LEP++ YV+LSN+YAS WEE
Sbjct: 509 TMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEE 568
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++ +M+ R + K P S
Sbjct: 569 AATVKRLMRERGVKKKPGCS 588
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 19/275 (6%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N F + I+ Y+K AR+VFDE P+ + S+N +IA + G + A+ +F ++
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVR 133
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ F D T+ V ACG D+ L Q+H +V V + N+++ Y + G
Sbjct: 134 ELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFV--VVCGYDCYASVNNAVLACYSRKGF 189
Query: 275 MDLAYKVFWEIDQ---PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
++ A +VF E+ + + SW +MIV + EA++ F M G++ + T V
Sbjct: 190 LNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASV 249
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRF---AHYGC-MVDLLGR-AGLLEEARAMVEG 386
L+A + G F MM I+ F +H G ++DL + AG + E R + E
Sbjct: 250 LTAFTCVKDLVGGMQFHGMM-----IKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEE 304
Query: 387 MPMKANVVIWGCLMGACEKFGNV-KMGEWVAKHLQ 420
+ ++V+W ++ ++ ++ + G W + +Q
Sbjct: 305 IA-APDLVLWNTMISGFSQYEDLSEDGIWCFREMQ 338
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 28/183 (15%)
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
S CGSL + + + + +Y + N+LI+ Y K + LA +VF EI QP+
Sbjct: 55 SKCGSLHNAQTSFDLTQY---------PNVFSYNTLINAYAKHSLIHLARQVFDEIPQPD 105
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
+ S+ ++I YA G AL F +RE + T GV+ AC + H F
Sbjct: 106 IVSYNTLIAAYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGLVRQLHCFV 165
Query: 350 MMKNVYQIEPRFAHYGCMVDL-------LGRAGLLEEARAMVEGMPMKA--NVVIWGCLM 400
++ Y C + R G L EAR + M + V W ++
Sbjct: 166 VV----------CGYDCYASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMI 215
Query: 401 GAC 403
AC
Sbjct: 216 VAC 218
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 205/375 (54%), Gaps = 2/375 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W I+ YT+ E AL ++ M GV D Y IVLKA L L GRQ+H
Sbjct: 177 AVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHG 236
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+LGLES + + Y K + E A K F+ E SW+A+I G Q G +E
Sbjct: 237 HIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEE 296
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F L+ + + T S+ AC +L D Q H +KS + +++
Sbjct: 297 ALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADA--IKSSLVAYQHGESAM 354
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I MY +CGR+D A +VF ID P+ +WT++I GYA G A EAL F M++ G+RPN
Sbjct: 355 ITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNA 414
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+ VL+AC H G V EG+ + E M + Y + HY CMVD+ RAG L+EA ++
Sbjct: 415 VTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIR 474
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + + W CL+G C + N+++GE A++L +L+P Y+++ N+YAS G W+E
Sbjct: 475 SMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKE 534
Query: 446 VERIRAVMKHRNLAK 460
+R +M RNL K
Sbjct: 535 AANVRKMMAERNLRK 549
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 156/366 (42%), Gaps = 19/366 (5%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +L +++ + +++ WN II Y K ++ M P
Sbjct: 57 KCGSLADARKVFDEMRERNLVS-------WNTIISAYAENGVFDKGFCMFSNMLELETKP 109
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ T L++ LEIG+Q+HS A+R GL SN + ++Y K G E A VF
Sbjct: 110 NGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVF 169
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
++ E+ +W I+ G +Q R +A+ +F + G E D+ V AC L +L
Sbjct: 170 EKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELN 229
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H ++ VK +S+ + L+D Y KC ++ A K F I +PN SW+++I G
Sbjct: 230 FGRQIHGHI--VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITG 287
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y G EAL F +R + N T+ + AC G + I+
Sbjct: 288 YCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQ-----AHADAIKS 342
Query: 360 RFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
Y M+ + R G L+ A + E + + V W ++ GN +
Sbjct: 343 SLVAYQHGESAMITMYSRCGRLDYATRVFESID-DPDAVAWTAIIAGYAYQGNAPEALKL 401
Query: 416 AKHLQE 421
+ +Q+
Sbjct: 402 FRRMQD 407
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 162/375 (43%), Gaps = 25/375 (6%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M AG+ + + +A ++ +L GR H R EF E+ + +Y K G
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
ARKVFDE ER L SWN II+ +++G + MF + + +P+ T + +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
+ LE+ Q+H + ++S S+ + ++ +MY KCG ++ A VF ++ + N
Sbjct: 121 LLNPSGLEIGKQIHSHA--IRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAV 178
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+WT ++VGY +AL F M G+ + F VL AC ++ G+ +
Sbjct: 179 AWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHI 238
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ +E + +VD + LE A E + + N V W L+ G +M
Sbjct: 239 VKL-GLESEVSVGTPLVDFYVKCSNLESATKAFEWIS-EPNDVSWSALIT-----GYCQM 291
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYAS------------RGLWEEVERIRAVM---KHR 456
GE+ + L+ E + + S Y S G + I++ + +H
Sbjct: 292 GEF-EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 457 NLAKIPAYSLATRLD 471
A I YS RLD
Sbjct: 351 ESAMITMYSRCGRLD 365
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 251/480 (52%), Gaps = 72/480 (15%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHML-HSYSAA-------------------------- 86
V + L KC +L +L QI+A +I+T++L H ++ +
Sbjct: 9 VVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQ 68
Query: 87 ----FHWNNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFAL 137
F + +I+ ++ P ++L +Y M +GV +++P VLKA +L A
Sbjct: 69 HPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVE---FSIPSVLKACGKLLAF 125
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+ GRQ+H ++ L + F + + +Y G+ E AR+VFD P R + SWN++IAG
Sbjct: 126 DEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGY 185
Query: 198 SQDGRAK-------------------------------EAIDMFIGLKKCGFEPDDVTMV 226
+ G + +A+D+F + G PD +V
Sbjct: 186 LKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIV 245
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV SA LG +E +H YV + + S + ++LIDMY KCG ++ AY VF I
Sbjct: 246 SVLSAIADLGFVEEGKWLHAYV-SMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSIS 304
Query: 287 -QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ N+ W SMI G A +GLA EALD F M I PN +TF+G+LS C HGG V+EG+
Sbjct: 305 HRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQ 364
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+FE M Y+I PR HYGCM+DL GRAG LE+A +++ MP +A+++ W ++ A K
Sbjct: 365 FYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMK 424
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G++++G+ A EL P +YV+LSNIYA G W++V +IR +M+ R + KI S
Sbjct: 425 HGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCS 484
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 237/440 (53%), Gaps = 13/440 (2%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVA--TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
H R + A S L +H +P + + + +KC L + +++ + + +
Sbjct: 85 HPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEM-------PHPST 137
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +I Y ++A+ + G+ PD +T VL A ++ L G +
Sbjct: 138 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 197
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A + G+ + F + + LY K G+ KAR+VFD+ + +W A++ G + +G +EA
Sbjct: 198 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 257
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-L 265
+D+F+ ++ G +PD + SAC LG L+L Q + V + D +L + L
Sbjct: 258 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA---IRMVDWDEFLDNPVLGTAL 314
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG A+ VF ++ + ++ W +MI+G G A M +SG++ N
Sbjct: 315 IDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLND 374
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TF+G+L +C H G +Q+G+ +F M +Y I PR HYGCMVDLL RAGLL+EA +V+
Sbjct: 375 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 434
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM AN VI G L+G C+ N ++ E V K L LEPW+ G YV+LSNIY++RG WE+
Sbjct: 435 DMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWED 494
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++R MK + + K+PA S
Sbjct: 495 AAKLRLDMKAKGVEKVPACS 514
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 226/378 (59%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y P +A+ I M G P+ T VL A +L L G+++H++ V
Sbjct: 431 WNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV 490
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+GL S+ F + I +Y+K G AR VF+ + + ++ S+N +I G S+ ++++
Sbjct: 491 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEV-SYNILIIGYSETDDCLQSLN 549
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G +PD V+ V V SAC +L L+ +VH +++ S + NSL+D
Sbjct: 550 LFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVA--LRNHLYSHLFVSNSLLDF 607
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+D+A ++F +I +V+SW +MI+GY G A+ F MR+ ++ + V++
Sbjct: 608 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 667
Query: 329 VGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VLSAC HGG V+ G ++F EM+ ++EP HY CMVDLLGRAG +EEA +++ +
Sbjct: 668 IAVLSACSHGGLVERGWQYFSEMLAQ--RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL 725
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ + IWG L+GAC +GNV++G A+HL EL+P G Y++LSNIYA G W+E
Sbjct: 726 PIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEAN 785
Query: 448 RIRAVMKHRNLAKIPAYS 465
+IR +MK R K P S
Sbjct: 786 KIRELMKSRGAKKNPGCS 803
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 156/321 (48%), Gaps = 10/321 (3%)
Query: 85 AAFHWNNIIRLYT-RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
AF WN +IR ++ + Y M R GV D +T P VLK F + G ++
Sbjct: 122 TAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEV 181
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H + +LG +++ + + + LY G AR++FDE PER + SWN II LS +G
Sbjct: 182 HGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLLSVNGDY 241
Query: 204 KEAID-MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EA + F + + +P+ V+++S+ +L D E+ ++H Y VK S
Sbjct: 242 TEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCY--SVKVGLDSQVTTC 299
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+L+D YGKCG + ++VF E + N SW S+I G A G +AL+ F M ++G +
Sbjct: 300 NALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQ 359
Query: 323 PNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PN VT +L V + GK H F M E ++D+ ++G EA
Sbjct: 360 PNSVTISSILPVLVELECFKAGKEIHGFSMRMGT---ETDIFIANSLIDMYAKSGHSTEA 416
Query: 381 RAMVEGMPMKANVVIWGCLMG 401
+ + + N+V W ++
Sbjct: 417 STIFHNLD-RRNIVSWNAMIA 436
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 46/441 (10%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD+ + KC ++ L Q++ + + + WN+II
Sbjct: 292 LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS-------WNSIINGLACKGRCW 344
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
AL+ + M AG P+ T+ +L +L + G+++H ++R+G E++ F + I
Sbjct: 345 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 404
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K+G +A +F R + SWNA+IA + + EAI I +++ G P+ V
Sbjct: 405 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 464
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T +V AC LG L ++H V+ SD + NSLIDMY KCG + A VF
Sbjct: 465 TFTNVLPACARLGFLGPGKEIH--AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF- 521
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + S+ +I+GY+ ++L+ F MR G +P+ V+FVGV+SAC + +++
Sbjct: 522 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 581
Query: 344 GK--HFFEMMKNVY-------------------QIEPRF---------AHYGCMVDLLGR 373
GK H + ++Y I R A + M+ G
Sbjct: 582 GKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGM 641
Query: 374 AGLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNVKMG-EWVAKHL-QELEPWSDG 428
G LE A +M E M ++ ++V + ++ AC G V+ G ++ ++ L Q LEP ++
Sbjct: 642 IGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEP-TEM 700
Query: 429 AYVVLSNIYASRGLWEEVERI 449
Y + ++ G EE ++
Sbjct: 701 HYTCMVDLLGRAGFVEEAAKL 721
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 4/294 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN II L + +A + Y +M R+ + P+ ++ +L S L E+ R++H +
Sbjct: 228 WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 287
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V++GL+S + + Y K G + +VF+E E+ SWN+II GL+ GR +A+
Sbjct: 288 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 347
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ F + G +P+ VT+ S+ L + ++H F ++ ++D + NSLID
Sbjct: 348 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHG--FSMRMGTETDIFIANSLID 405
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY K G A +F +D+ N+ SW +MI YA N L EA+ M+E+G PN VT
Sbjct: 406 MYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 465
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
F VL AC G + GK M + F ++D+ + G L AR
Sbjct: 466 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS-NSLIDMYAKCGCLHSAR 518
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ YT+ K L+++ M + G D +TL VLK LFA+ G+Q+H+ A+
Sbjct: 492 WNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAI 551
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + + SG + +Y K GD A+ FD P +W +I+G ++G + A+
Sbjct: 552 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALH 611
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD+ T+ ++ A L LE Q+H ++ SD + SL+DM
Sbjct: 612 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT--SDPFVGTSLVDM 669
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D AY +F I+ N+++W +M+VG A +G EAL F M GI+P+ VTF
Sbjct: 670 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTF 729
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G V E + M Y I+P HY C+ D LGRAGL++EA +++ M
Sbjct: 730 IGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMS 789
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+A+ ++ L+ AC G+ + G+ VA L ELEP AYV+LSN+YA+ W+E++
Sbjct: 790 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 849
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK + K P +S
Sbjct: 850 ARTMMKGHKVKKDPGFS 866
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 175/377 (46%), Gaps = 10/377 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-FALEIGRQLHSLA 147
WN++I + + +A+ +++ + R G+ PD YT+ VLKA+ L L + +Q+H A
Sbjct: 391 WNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHA 450
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ ++ F + I YS+ ++A +F N L +WNA+++G +Q + +
Sbjct: 451 IKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRN-NFDLVAWNAMMSGYTQSHDGHKTL 509
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + K G DD T+ +V CG L + QVH Y +KS D + + ++D
Sbjct: 510 ELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYA--IKSGYDLDLWVSSGILD 567
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG M A F I P+ +WT++I G NG AL F MR G+ P+ T
Sbjct: 568 MYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFT 627
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++G+ + F +VD+ + G +++A + + +
Sbjct: 628 IATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTS-LVDMYAKCGSIDDAYCLFKRI 686
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEE 445
M N+ W ++ + G K + K ++ L D VLS S + E
Sbjct: 687 EM-MNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEA 745
Query: 446 VERIRAVMKHRNLAKIP 462
+ IR++ HR+ P
Sbjct: 746 YKYIRSM--HRDYGIKP 760
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 162/320 (50%), Gaps = 8/320 (2%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N I+ Y L ++ M + + D T +VL + +L +L +G+Q+H +A++
Sbjct: 291 NKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALK 350
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LGL+ + I++Y K AR VF+ ER L SWN++IAG++Q EA+ +
Sbjct: 351 LGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCL 410
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ L +CG +PD TM SV A SL + L L+ Q+H V +K+ +D+ + +LID
Sbjct: 411 FMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIH--VHAIKTNNVADSFVSTALIDA 468
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + M A +V + + ++ +W +M+ GY + ++ L+ F M + G R + T
Sbjct: 469 YSRNRCMKEA-EVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTL 527
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL C + +GK +K+ Y ++ + ++D+ + G + A+ + +
Sbjct: 528 ATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSI 585
Query: 388 PMKANVVIWGCLMGACEKFG 407
P+ +V W L+ C + G
Sbjct: 586 PVPDDVA-WTTLISGCIENG 604
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L +G+ H+ + L F + IS+YSK G AR+VFD+ PER L SWN+I+A
Sbjct: 62 LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121
Query: 197 LSQDGRA-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
+Q KEA +F L++ +T+ + C G + + H Y ++
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
D + +L+++Y K G++ +F E+ +V W M+ Y G EA+D
Sbjct: 182 --GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 239
Query: 312 CFHYMRESGIRPNHVTF 328
SG+ PN +T
Sbjct: 240 LSSAFHTSGLHPNEITL 256
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 128/313 (40%), Gaps = 52/313 (16%)
Query: 44 LDTHEDPAKIVATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTR- 98
L E+P + + L SKC +L +++ + ++ WN+I+ Y +
Sbjct: 73 LALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVS-------WNSILAAYAQS 125
Query: 99 ----LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
+E K+A ++ + + V TL +LK + H A ++GL+
Sbjct: 126 SEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDG 185
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
++F +++Y K G ++ R +F+E P R + WN ++ + G +EAID+
Sbjct: 186 DDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 245
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS-KQKSDTLMLNSLIDMYGKCG 273
G P+++T+ ++ G D E QVKS + +D ++ +I
Sbjct: 246 TSGLHPNEITLRLLSRISGD--DSEAG--------QVKSFENGNDASAVSEII------- 288
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
S ++ GY G + L CF M ES + + VTF+ VL+
Sbjct: 289 ------------------SRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLA 330
Query: 334 ACVHGGKVQEGKH 346
V + G+
Sbjct: 331 TAVRLDSLALGQQ 343
>gi|296086445|emb|CBI32034.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 241/443 (54%), Gaps = 49/443 (11%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHS------YSAAFH----------------------- 88
L+ CT + QL Q++A IRT H YS H
Sbjct: 33 LNSCTCISQLKQLHAQTIRTTSSHHPNTFFLYSRILHFSSLHDLRYAFRVFHQIENPNSF 92
Query: 89 -WNNIIRLYTRLEAPKK-ALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN +IR R K+ A+ +Y M G V+ D +T P VLKA LFAL G Q+H+
Sbjct: 93 MWNALIRACARSTDRKQHAIALYHRMLEQGSVMQDKHTFPFVLKACAYLFALSEGEQIHA 152
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++LG +S+ + + + Y+ + A+ VFD ER L SWN +I + G
Sbjct: 153 QILKLGFDSDVYINNSLVHFYATCDRLDFAKGVFDRMSERSLVSWNVVIDAFVRFGEFDA 212
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F ++K FEPD T+ S+ +AC +G L L + +D L+ SL
Sbjct: 213 ALNLFGEMQKF-FEPDGYTIQSIANACAGMGSLSLGI-------------VNDVLLNTSL 258
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPN 324
+DMY KCG ++LA ++F + + +V+SW SMI+G++ +G AL+ F M R + PN
Sbjct: 259 VDMYCKCGSLELALQLFHRMPKRDVTSWNSMILGFSTHGEVAAALEYFGCMVRTEKLMPN 318
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TFVGVLSAC HGG V EG+ +F++M Y+I+P HYGC+VDLL RAGL++EA +V
Sbjct: 319 AITFVGVLSACNHGGLVSEGRRYFDVMVTEYKIKPELEHYGCLVDLLARAGLIDEALDVV 378
Query: 385 EGMPMKANVVIWGCLMGA-CEKFGNVKMGEWVAKHLQELEPW-SDGAYVVLSNIYASRGL 442
MPM+ ++VIW L+ A C++ V++ E +A+ + E E G YV+LS +YAS
Sbjct: 379 SNMPMRPDLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASR 438
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W +V +R +M + + K P S
Sbjct: 439 WNDVGMVRKLMTDKGVVKEPGCS 461
>gi|297817620|ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322531|gb|EFH52952.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 229/429 (53%), Gaps = 43/429 (10%)
Query: 78 HMLHSYSAAFHWNNIIRLYTRLEAPKK---ALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
H+ H +F WN IIR +P + + +Y M V PD +T P +L +
Sbjct: 15 HIRHLKLESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNP 74
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA------------------- 175
L +G++ H+ + GL+ + F + +++YS GD A
Sbjct: 75 IHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVV 134
Query: 176 ------------RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-----KCGF 218
RK+FDE PER + SW+ +I G G+ KEA+D+F ++ +
Sbjct: 135 NAYAKAGLINHARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEVFV 194
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P+ TM +V SACG LG LE VH Y+ K + D ++ +LIDMY KCG ++ A
Sbjct: 195 SPNKFTMSTVLSACGRLGALEQGKWVHSYI--DKYGVEIDIVLGTALIDMYAKCGSLERA 252
Query: 279 YKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSACV 336
+VF + + +V ++++MI A GL +E F M S I PN VTFVG+L ACV
Sbjct: 253 KRVFDALGSKKDVKAYSAMICCLAMYGLTDECFQVFSEMTTSNNINPNSVTFVGILGACV 312
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G + +GK +F+MM + I P HYGCMVDL GR+GL++EA + + MPM+ +V+IW
Sbjct: 313 HRGLINKGKSYFKMMTEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 372
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+ G++K E K L EL+P + GAYV+LSN+YA G W EV+RIR M+ +
Sbjct: 373 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWIEVKRIRHEMEVK 432
Query: 457 NLAKIPAYS 465
+ K+P S
Sbjct: 433 GIKKVPGCS 441
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 239/447 (53%), Gaps = 40/447 (8%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM 112
+V L C NL ++ YA ++ +LH F +N IIR Y A+ +++ M
Sbjct: 44 LVTKMLDSCDNLGHVS--YATLLFKQLLHP--NIFTYNAIIRTYAHNRHHSSAISVFVQM 99
Query: 113 ---SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
S V PD +T P V+K+ + +G Q+H L + G + + E+ I +Y+K
Sbjct: 100 LTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKF 159
Query: 170 GD-------FEK------------------------ARKVFDENPERKLGSWNAIIAGLS 198
GD FE+ AR++FD+ P R + SW +I G
Sbjct: 160 GDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYG 219
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G +A+D+F ++ G EPD++++++V AC LG LE+ +H Y + +K
Sbjct: 220 RMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRK-- 277
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T + N+LI+MY KCG +D A+ +F ++ + +V SW++MI G A +G EA+ F M +
Sbjct: 278 TGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCK 337
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ PN +TF+GVL AC H G EG +F++M Y IEP HYGC++DLLGR+G L
Sbjct: 338 VRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLG 397
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
+A + MP+K + IW L+ +C N+++ K L ELEP G YV+L+N+YA
Sbjct: 398 QALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYA 457
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
G WE+V IR +++++ + K P S
Sbjct: 458 EHGKWEDVSNIRKLIRNKRIKKTPGSS 484
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 221/404 (54%), Gaps = 35/404 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + K+AL + M +GVL D L VL A + L G+ +HS +
Sbjct: 139 WGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYML 198
Query: 149 RLGLESNEFCESGFISLYSKAGD-------------------------------FEKARK 177
+ N S I+LY+ FE AR
Sbjct: 199 VSDILINAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARY 258
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD PE+ + SW+A+I+G + + EA+ +F +++CG PD+VTM+SV SAC +LG
Sbjct: 259 IFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGS 318
Query: 238 LELALQVHKYVFQVKSKQKSDTL-MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ A +H ++ K+ + L + N+LIDM+ KCG ++LA +F E+ Q NV +WTSM
Sbjct: 319 LDKAKWIHAFI---KNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSM 375
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I +A +G AL F MR G+ PN VTF+ +L AC H G V EG+ F M Y
Sbjct: 376 ITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYG 435
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEP+ HYGCMVDLLGRA L++EA ++E M ++ NV +WG L+ AC G++K+G + A
Sbjct: 436 IEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHGDLKLGAFAA 495
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
K + +L+P DGA V+LS IY + + +R VMK + ++K
Sbjct: 496 KKILQLDPNHDGASVLLSKIYMKSDNLNDAQEVRDVMKLQGVSK 539
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 154/346 (44%), Gaps = 45/346 (13%)
Query: 102 PKKALDIYIFMSRAGVLPDC-YTLPIVLKASCQLF-ALEIGRQLHSLAVRLGLESNEFCE 159
P+ L + R G+ P LP +L+++ + A R H+LA R+G + F
Sbjct: 49 PRLVLAACACLRRTGLPPPGPRALPALLRSAARCVGAGAYVRGAHALAFRVGSLDDGFVR 108
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ + Y+ G ARKVFD R + SW ++ Q KEA+ F +K G
Sbjct: 109 TALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVL 168
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL----MLNSLIDMYGKCGRM 275
D + + +V SACG + L +H Y+ SD L + ++LI++Y C M
Sbjct: 169 SDQLILATVLSACGHIRHLRTGKSIHSYMLV------SDILINAHLSSALINLYASCASM 222
Query: 276 DLAYK-------------------------------VFWEIDQPNVSSWTSMIVGYAANG 304
++A K +F + + +V SW++MI GYA +
Sbjct: 223 EMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSN 282
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
NEAL F+ M+E GIRP+ VT + V+SAC + G + + K +KN +
Sbjct: 283 QPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKN-NGLNKILHIC 341
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G + A + MP K NV+ W ++ A G+ K
Sbjct: 342 NALIDMFAKCGGINLALNIFNEMPQK-NVITWTSMITAFAMHGDGK 386
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 232/407 (57%), Gaps = 9/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S+C ++ ++ ++R ++ W +I + +AL +Y M +AGV
Sbjct: 374 SRCGSIKDARLVFDKMVRKDVIS-------WTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T +L A ALE GR++H V GL ++ + +++YS G + AR+V
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD +R + ++NA+I G + KEA+ +F L++ G +PD VT +++ +AC + G L
Sbjct: 487 FDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 546
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E A ++H V K SDT + N+L+ Y KCG A VF ++ + NV SW ++I
Sbjct: 547 EWAREIHTLVR--KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIG 604
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A +G +AL F M+ G++P+ VTFV +LSAC H G ++EG+ +F M + I
Sbjct: 605 GSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAII 664
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYGCMVDLLGRAG L+EA A+++ MP +AN IWG L+GAC GNV + E A+
Sbjct: 665 PTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAES 724
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L+ + YV LS++YA+ G+W+ ++R +M+ R + K P S
Sbjct: 725 SLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 771
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 193/372 (51%), Gaps = 17/372 (4%)
Query: 41 SSFLDTHEDPAKIVATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLY 96
S L+ + V T L +KC + Q++ ++ ++ WN +I
Sbjct: 251 SRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIA-------WNTMIGGL 303
Query: 97 TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNE 156
++A ++Y M R GV+P+ T I+L A AL G+++HS + G S+
Sbjct: 304 AEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
++ IS+YS+ G + AR VFD+ + + SW A+I GL++ G EA+ ++ +++
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G EP+ VT S+ +AC S LE ++H+ V V++ +D + N+L++MY CG +
Sbjct: 424 GVEPNRVTYTSILNACSSPAALEWGRRIHQQV--VEAGLATDAHVGNTLVNMYSMCGSVK 481
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +VF + Q ++ ++ +MI GYAA+ L EAL F ++E G++P+ VT++ +L+AC
Sbjct: 482 DARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541
Query: 337 HGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ G ++ + ++ K + + + +V + G +A + E M K NV+
Sbjct: 542 NSGSLEWAREIHTLVRKGGFFSDTSVGN--ALVSTYAKCGSFSDASIVFEKMT-KRNVIS 598
Query: 396 WGCLMGACEKFG 407
W ++G + G
Sbjct: 599 WNAIIGGSAQHG 610
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 170/328 (51%), Gaps = 22/328 (6%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + +KAL + M + G+ PD T+ L + ALE GR++H A+
Sbjct: 94 WNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAM 153
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL + + +++Y+K G E+AR+VFD+ ++ + SW I G + GR++ A +
Sbjct: 154 QAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFE 213
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G P+ +T +SV +A S L+ VH + + +SDT + +L+ M
Sbjct: 214 IFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILN--AGHESDTAVGTALVKM 271
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +VF ++ ++ +W +MI G A G EA + ++ M+ G+ PN +T+
Sbjct: 272 YAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITY 331
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG---------CMVDLLGRAGLLEE 379
V +L+ACV+ + GK +I R A G ++ + R G +++
Sbjct: 332 VILLNACVNSAALHWGK----------EIHSRVAKAGFTSDIGVQNALISMYSRCGSIKD 381
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFG 407
AR + + M ++ +V+ W ++G K G
Sbjct: 382 ARLVFDKM-VRKDVISWTAMIGGLAKSG 408
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 160/306 (52%), Gaps = 8/306 (2%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A+D+ ++ + G + +LK ++ L GRQ+H ++ +++ + I+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 165 LYSKAGDFEKARKVFDENP--ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+Y + G E+AR+V+ + ER + SWNA++ G Q G ++A+ + +++ G PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQ-VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
T++S S+C S G LE ++H FQ +++ D + N +++MY KCG ++ A +V
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIH---FQAMQAGLLFDVKVANCILNMYAKCGSIEEAREV 183
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++++ +V SWT I GYA G + A + F M + G+ PN +T++ VL+A +
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ GK + N E A +V + + G ++ R + E + + +++ W ++G
Sbjct: 244 KWGKAVHSRILNAGH-ESDTAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTMIG 301
Query: 402 ACEKFG 407
+ G
Sbjct: 302 GLAEGG 307
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 227/418 (54%), Gaps = 11/418 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N + + + A I+ +HS A F WN ++ Y + E + ++++ M
Sbjct: 57 NEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 116
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
V PD TL ++L + +L L+ GRQ+HS +VR L ++ F SG + +YSK G
Sbjct: 117 HQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIG 176
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR +F++ ER + WN+II+GL+ KEA D F +++ G P + + S+ ++C
Sbjct: 177 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCS 236
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L + Q+H V +K + + ++LIDMY KCG MD A F + N+ +W
Sbjct: 237 RLSSIPHGRQIHAQV--MKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 294
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
MI GYA NGL ++A++ F YM + +P+ VTF+ VL+ C H G V + FF M+N
Sbjct: 295 NEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMEN 354
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HY C++D LGRAG E A++ MP K + +IW L+ AC N ++G+
Sbjct: 355 SYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGK 414
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
A+HL ++P + YV+LSNIYAS G + +RA+M +R + K YS + D
Sbjct: 415 CAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKD 472
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 6/253 (2%)
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
SL G E NE S ++ KA D AR +FD+ + +WN +++G Q+ + +
Sbjct: 47 SLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQ 106
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+ I++F ++ +PD T+ + S+C LG L+ QVH V+ +D + +
Sbjct: 107 DTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSA--SVRFLLHNDMFVASG 164
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+DMY KCG++ +A +F ++ + +V W S+I G + L EA D F MRE+GI P
Sbjct: 165 LVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPT 224
Query: 325 HVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
++ ++++C + G+ ++MK+ Y ++D+ + G +++AR
Sbjct: 225 ESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVG--SALIDMYAKCGNMDDARLF 282
Query: 384 VEGMPMKANVVIW 396
+ M MK N+V W
Sbjct: 283 FDTMMMK-NIVAW 294
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y+K + ++A KVF+ P + SWN +I G Q+G +A+++ +++ GFEP++VT
Sbjct: 1 MYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVT 60
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
++ ++C D VH A +F +
Sbjct: 61 YSNLLASCIKARD------VHS-------------------------------ARAMFDK 83
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I +P+V++W +++ GY + ++ F M+ ++P+ T +LS+C G + G
Sbjct: 84 ISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFG 143
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ F G +VD+ + G + AR++ M + +VV W ++
Sbjct: 144 RQVHSASVRFLLHNDMFVASG-LVDMYSKCGQIGIARSIFNKMTER-DVVCWNSII 197
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 227/418 (54%), Gaps = 11/418 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N + + + A I+ +HS A F WN ++ Y + E + ++++ M
Sbjct: 73 NEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 132
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
V PD TL ++L + +L L+ GRQ+HS +VR L ++ F SG + +YSK G
Sbjct: 133 HQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIG 192
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR +F++ ER + WN+II+GL+ KEA D F +++ G P + + S+ ++C
Sbjct: 193 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCS 252
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L + Q+H V +K + + ++LIDMY KCG MD A F + N+ +W
Sbjct: 253 RLSSIPHGRQIHAQV--MKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 310
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
MI GYA NGL ++A++ F YM + +P+ VTF+ VL+ C H G V + FF M+N
Sbjct: 311 NEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMEN 370
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HY C++D LGRAG E A++ MP K + +IW L+ AC N ++G+
Sbjct: 371 SYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGK 430
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
A+HL ++P + YV+LSNIYAS G + +RA+M +R + K YS + D
Sbjct: 431 CAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKD 488
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 155/308 (50%), Gaps = 10/308 (3%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++I +YT+ +A+ ++ + ++ + I++ Q + ++ SL
Sbjct: 12 NSLIDMYTKCVEMDEAVKVFESLPSVTIV----SWNILITGFGQEGSCAKAVEVLSLMQE 67
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
G E NE S ++ KA D AR +FD+ + +WN +++G Q+ + ++ I++
Sbjct: 68 AGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIEL 127
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F ++ +PD T+ + S+C LG L+ QVH V+ +D + + L+DMY
Sbjct: 128 FRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSA--SVRFLLHNDMFVASGLVDMY 185
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG++ +A +F ++ + +V W S+I G + L EA D F MRE+GI P ++
Sbjct: 186 SKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYA 245
Query: 330 GVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
++++C + G+ ++MK+ Y ++D+ + G +++AR + M
Sbjct: 246 SMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVG--SALIDMYAKCGNMDDARLFFDTMM 303
Query: 389 MKANVVIW 396
MK N+V W
Sbjct: 304 MK-NIVAW 310
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 112/252 (44%), Gaps = 39/252 (15%)
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G S++ + I +Y+K + ++A KVF+ P + SWN +I G Q+G +A++
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ +++ GFEP++VT ++ ++C D VH
Sbjct: 61 VLSLMQEAGFEPNEVTYSNLLASCIKARD------VHS---------------------- 92
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
A +F +I +P+V++W +++ GY + ++ F M+ ++P+ T
Sbjct: 93 ---------ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTL 143
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+LS+C G + G+ F G +VD+ + G + AR++ M
Sbjct: 144 AVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASG-LVDMYSKCGQIGIARSIFNKMT 202
Query: 389 MKANVVIWGCLM 400
+ +VV W ++
Sbjct: 203 ER-DVVCWNSII 213
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 226/409 (55%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + ++L+++ M V+PD L VL A L ++GR +H+ V
Sbjct: 336 WTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIV 395
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA----- 203
G+ + F + + LY+K G ++A + F++ P + SWN+++ G + G
Sbjct: 396 TYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARD 455
Query: 204 --------------------------KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
E+ ++F ++ +PD T++S+ S+C +G
Sbjct: 456 FFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGA 515
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L + V+ Y+ K++ D ++ +LIDMYGKCG +++AY++F +I + NV WT+M+
Sbjct: 516 LNHGIWVNVYI--EKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMM 573
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
YA G A EA+D + M E G++P+HVTF+ +L+AC HGG V EG +F +++ Y I
Sbjct: 574 AAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNI 633
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P HYGCMVDLLGR G LEE +E MP++ +V IW LM AC NV++ E K
Sbjct: 634 IPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFK 693
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L E++P ++GA+V+LSNIYA G W++V ++R + + K P +++
Sbjct: 694 QLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTM 742
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 209/463 (45%), Gaps = 70/463 (15%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH-------------------------SYS---AAFHW 89
L C+N+ + + I+AH+I +++H SYS + W
Sbjct: 42 LKSCSNIREFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSHEPESIIW 101
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N ++ + P++ L+ Y M GVL D T ++ A C+ F +++G ++H ++
Sbjct: 102 NTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILK 161
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
G N+ + + LYSK G ++ ++F++ R + SWN +I+ G +EA+D+
Sbjct: 162 CGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDL 221
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G PD++TMVS+ S C L DLE+ ++H Y+ V +K +LN L+DMY
Sbjct: 222 FDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYI--VDNKLWIRGSLLNCLVDMY 279
Query: 270 GKCGRMDLAY---------------------------------KVFWEIDQPNVSSWTSM 296
KCG+MD A+ ++F ++++ ++ SWT+M
Sbjct: 280 SKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTM 339
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
+ GY G E+L+ F MR + P+ V V VLSACVH G+ +
Sbjct: 340 MSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGM 399
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ F ++DL + G L+EA E +P K+ L G C G K ++
Sbjct: 400 LVDGFLG-NALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFN 458
Query: 417 K-HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
K +++ W+ + N Y L+ E I M+ N+
Sbjct: 459 KIPEKDIVSWN-----TMVNAYVKHDLFNESFEIFCKMQSSNV 496
>gi|224111152|ref|XP_002315764.1| predicted protein [Populus trichocarpa]
gi|222864804|gb|EEF01935.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 193/301 (64%), Gaps = 2/301 (0%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ IS YS+ G E AR +FD+ E+ L W+A+I+G ++ + +EA+++F ++ G +
Sbjct: 18 TAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQVFGIK 77
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD VT++SV SAC LG L+ A +H YV K+ + N+LIDMY KCG + A
Sbjct: 78 PDQVTILSVISACARLGVLDRAKWIHMYVD--KNGLGGALPVNNALIDMYAKCGNLGAAR 135
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF ++ NV SWTSMI +A +G A+ AL F+ M++ I+PN VTFVGVL AC H G
Sbjct: 136 GVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPNGVTFVGVLYACSHAG 195
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG+ F M N + I P+ HYGCMVDL GRA LL +A +VE MP+ NVVIWG L
Sbjct: 196 LVEEGRRTFASMTNEHNITPKHEHYGCMVDLFGRANLLRDALELVETMPLAPNVVIWGSL 255
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
M AC+ G ++GE+ AK + ELEP DGA V LSNIYA W++V +R +MK R ++
Sbjct: 256 MAACQIHGENELGEFAAKQVLELEPDHDGALVQLSNIYAKDRRWQDVGELRNLMKQRGIS 315
Query: 460 K 460
K
Sbjct: 316 K 316
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 29/295 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + P++AL+++ M G+ PD T+ V+ A +L L+ + +H
Sbjct: 48 WSAMISGYAESDKPQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVD 107
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL + I +Y+K G+ AR VF++ R + SW ++I + G A A+
Sbjct: 108 KNGLGGALPVNNALIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALK 167
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM---LNSL 265
F +K +P+ VT V V AC G +E + F + + + T +
Sbjct: 168 FFYQMKDENIKPNGVTFVGVLYACSHAGLVEEG----RRTFASMTNEHNITPKHEHYGCM 223
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+D++G+ + A ++ + PNV W S++ +G NE L F + + P+
Sbjct: 224 VDLFGRANLLRDALELVETMPLAPNVVIWGSLMAACQIHG-ENE-LGEFAAKQVLELEPD 281
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
H G VQ + N+Y + R+ G + +L+ + G+ +E
Sbjct: 282 H-----------DGALVQ--------LSNIYAKDRRWQDVGELRNLMKQRGISKE 317
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ ++L ++I Y + GR++ A +F ++++ ++ W++MI GYA + EAL+ F M+
Sbjct: 13 NLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEMQ 72
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
GI+P+ VT + V+SAC G + K + M + + ++D+ + G L
Sbjct: 73 VFGIKPDQVTILSVISACARLGVLDRAK-WIHMYVDKNGLGGALPVNNALIDMYAKCGNL 131
Query: 378 EEARAMVEGMPMKANVVIWGCLMGA 402
AR + E M + NV+ W ++ A
Sbjct: 132 GAARGVFEKMQSR-NVISWTSMINA 155
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 223/377 (59%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I ++ + ++A+ ++ M + PD TL L A L +LE G+++H A+
Sbjct: 517 WASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYAL 576
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + +++YSK G AR+VFD P++ S +++++G +Q+G ++A+
Sbjct: 577 RARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALL 636
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ D T+ SV A L L++ Q+H V K ++ + +SL+ M
Sbjct: 637 LFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACV--TKMGLNAEVSVGSSLVTM 694
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D +KVF +I++P++ SWT+MIV YA +G EAL + MR+ G +P+ VTF
Sbjct: 695 YSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTF 754
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC H G V+EG M Y IEP + HY CMVDLLGR+G L+EA + MP
Sbjct: 755 VGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMP 814
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + ++WG L+ AC+ G++++G AK + ELEP GAYV LSNI A G WE+V +
Sbjct: 815 IEPDALLWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMK 874
Query: 449 IRAVMKHRNLAKIPAYS 465
IR++M+ + K P +S
Sbjct: 875 IRSLMEGTGVKKEPGWS 891
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 7/355 (1%)
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC 132
H +R + WN +I + + + + + M +G P+ +T VL A
Sbjct: 99 HALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACT 158
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
L + G ++SLA++ G SN + +G I L++K FE A +VF + + WNA
Sbjct: 159 ALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNA 218
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
II+G ++ A+D+F + F P+ T S+ +AC +L +LE V +V +K
Sbjct: 219 IISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWV--IK 276
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
D + ++ID+Y KC MD A K F + NV SWT++I G+ + A
Sbjct: 277 CGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHF 336
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLL 371
F MR+ G + N+ T VL+AC ++E + K + ++ + ++++
Sbjct: 337 FKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVS--SALINMY 394
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV-KMGEWVAKHLQE-LEP 424
+ G+++ + + M N+ +W ++ A + G+ + E + LQE L P
Sbjct: 395 SKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRP 449
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 150/306 (49%), Gaps = 7/306 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II + ALD++ M +P+ +T +L A L LE GR + +
Sbjct: 216 WNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVI 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + F + I LY+K D ++A K F P R + SW II+G Q + A
Sbjct: 276 KCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFH 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++K G + ++ T+ SV +AC ++ A+Q+H ++F K+ D+ + ++LI+M
Sbjct: 336 FFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIF--KTGFYLDSNVSSALINM 393
Query: 269 YGKCGRMDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y K G +DL+ +VF E++ N++ W MI +A +G A++ F M + G+RP+
Sbjct: 394 YSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFC 453
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VLS + + H + + ++ + + + + G LEE+ + E M
Sbjct: 454 SSSVLSI-IDSLSLGRLIHCYILKIGLFT---DISVGSSLFTMYSKCGSLEESYTVFEQM 509
Query: 388 PMKANV 393
P K NV
Sbjct: 510 PDKDNV 515
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 135/246 (54%), Gaps = 5/246 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + + +A++++ M + G+ PD + VL + +L +GR +H +
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYIL 475
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL ++ S ++YSK G E++ VF++ P++ SW ++I G S+ A++A+
Sbjct: 476 KIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQ 535
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + PD +T+ + +AC +L LE +VH Y ++++ + L+ +L++M
Sbjct: 536 LFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYA--LRARVGKEVLVGGALVNM 593
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + LA +VF + Q + S +S++ GYA NG +AL FH +R + + + T
Sbjct: 594 YSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTV 653
Query: 329 VGVLSA 334
V+ A
Sbjct: 654 SSVIGA 659
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 4/249 (1%)
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L+SN F + + Y K+ A ++FD+ P + SWN +I+G +Q+ +++ F
Sbjct: 77 LQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFC 136
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++ GF+P+ T SV SAC +LG V Y +K+ S+ + +ID++ K
Sbjct: 137 KMRFSGFDPNQFTYGSVLSACTALGSPLYGELV--YSLALKNGFFSNGYVRAGMIDLFAK 194
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
+ A +VF ++ NV W ++I G N ALD F M PN TF +
Sbjct: 195 LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSI 254
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
L+AC +++ G+ + E F ++DL + +++A MP++
Sbjct: 255 LTACAALEELEFGRGVQGWVIKCGAGEDVFVGTA-IIDLYAKCRDMDQAVKEFLRMPIR- 312
Query: 392 NVVIWGCLM 400
NVV W ++
Sbjct: 313 NVVSWTTII 321
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 138/308 (44%), Gaps = 42/308 (13%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F ++++ Y + + AL ++ + A + D +T+ V+ A L +L+IG QLH+
Sbjct: 616 FSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHAC 675
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++GL + S +++YSK G ++ KVF++ + L SW A+I +Q G+ EA
Sbjct: 676 VTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEA 735
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ ++ ++K G +PD VT V V SAC G +E LNS+
Sbjct: 736 LKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYS-----------------HLNSMA 778
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
YG +P + M+ +G EA ++ I P+ +
Sbjct: 779 KEYGI---------------EPGYYHYACMVDLLGRSGRLKEAE---RFINNMPIEPDAL 820
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP-RFAHYGCMVDLLGRAGLLEEA---RA 382
+ +L+AC G ++ G+ K V ++EP Y + ++ G E+ R+
Sbjct: 821 LWGILLAACKVHGDIELGRL---AAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRS 877
Query: 383 MVEGMPMK 390
++EG +K
Sbjct: 878 LMEGTGVK 885
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 233/447 (52%), Gaps = 66/447 (14%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N+++R + P+K + +Y M + GV PD YT VLKA +L G H VR
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 150 LGLESNEFCESGFI-------------------------------SLYSKAGDFEKARKV 178
G NE+ ++ I S Y+K G ++A ++
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 179 FDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEAI 207
FDE P E+ + +WNA+I+G G KEA+
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNS 264
+F ++ G PD VT++S+ SAC LGDLE ++H Y+ + S S T + N+
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG +D A +VF + ++S+W ++IVG A + A +++ F M+ + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPN 379
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+GV+ AC H G+V EG+ +F +M+++Y IEP HYGCMVD+LGRAG LEEA V
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
E M ++ N ++W L+GAC+ +GNV++G++ + L + G YV+LSNIYAS G W+
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 445 EVERIRAVMKHRNLAKIPAYSLATRLD 471
V+++R + + K SL D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
WN +I Y PK+AL I+ M AG PD T+ +L A L LE G++LH
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 145 -SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+ +V + + I +Y+K G ++A +VF +R L +WN +I GL+ A
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 361
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +I+MF +++ P++VT + V AC G +V +K +LM
Sbjct: 362 EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG-------------RVDEGRKYFSLMR- 407
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
DMY +PN+ + M+ G EA F ++ I P
Sbjct: 408 ---DMYNI---------------EPNIKHYGCMVDMLGRAGQLEEA---FMFVESMKIEP 446
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
N + + +L AC G V+ GK+ E + ++ + E
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE 481
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 145/360 (40%), Gaps = 82/360 (22%)
Query: 141 RQLHSLAVRLGLESN-----EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+Q+H+ V GL SN E S +S+ G + A K+FDE P+ + N ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSV---PGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL-------------------- 235
G +Q + ++ + ++ ++K G PD T V AC L
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 236 ---------------GDLELALQV-------HKYVFQVKS-----KQKSDTLM------- 261
GDL +A ++ HK + + + K D M
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP 205
Query: 262 ------LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
N +I KC MD A ++F + +V +W +MI GY G EAL F
Sbjct: 206 YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGK----HFFEMMKNVYQIEPRFAHYGCMVDLL 371
MR++G P+ VT + +LSAC G ++ GK + E I + ++D+
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 372 GRAGLLEEARAMVEGMPMKA----NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ G ++ A + G+ + N +I G + E G+++M E +Q L+ W +
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAE--GSIEMFE----EMQRLKVWPN 379
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 214/366 (58%), Gaps = 4/366 (1%)
Query: 96 YTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
Y+R PK+AL +Y M + G L + + + LKA L L+ GR +H+ ++ +
Sbjct: 153 YSRNGYPKEALLLYYEMVCQFGQLGN-FAFSMALKACSDLGDLQTGRAVHAQVLKATEDP 211
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
++ + + LYS+ G F++A +VFD P R + SWN++IAGL + EAI+ F ++
Sbjct: 212 DQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQ 271
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
G VT+ ++ C + L ++H + VKS K D +LNSL+DMY KCG
Sbjct: 272 GKGMGFSWVTLTTILPVCARVTALGSGKEIHAVI--VKSTAKPDAPVLNSLVDMYAKCGA 329
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
MD +VF + +++SW ++I GYA NG EA++ F M SG P+ +TF+ +LS
Sbjct: 330 MDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSG 389
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G +G FEMMK Y I P HY C+VD+LGRAG ++EA +V+ MP K
Sbjct: 390 CSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGS 449
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+ +C GNV + E VAK L ELEP + G YV+LSNIYA+ G+WE V+ +R M+
Sbjct: 450 IWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFME 509
Query: 455 HRNLAK 460
R + K
Sbjct: 510 KRGMTK 515
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 33/366 (9%)
Query: 50 PAKIVATQLSKCTNLLQLN---QIYAHIIRTHMLHSYSAAFHWNNIIRL--YTRLEAPKK 104
PA ++T ++ TN+ + ++ H + L S S + + +RL Y ++P
Sbjct: 5 PAISLSTNITVSTNITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIEYWPSKSPAT 64
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL------GLESNEFC 158
A PD + L + ALE G++L+ + L +N
Sbjct: 65 A-------------PDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTL 111
Query: 159 ESGFISLYSKAGDFEKARKVFD---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
+ I+L+S ++AR+VF+ E+ + W A+ G S++G KEA+ ++ +
Sbjct: 112 KGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEM-V 170
Query: 216 CGF-EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
C F + + AC LGDL+ VH V +K+ + D ++ N+L+ +Y + G
Sbjct: 171 CQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQV--LKATEDPDQVVNNALLRLYSEDGC 228
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
D A +VF + NV SW S+I G EA++ F M+ G+ + VT +L
Sbjct: 229 FDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPV 288
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C + GK ++ +P +VD+ + G ++ R + GM K ++
Sbjct: 289 CARVTALGSGKEIHAVIVK-STAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK-DLT 346
Query: 395 IWGCLM 400
W L+
Sbjct: 347 SWNTLI 352
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 120/258 (46%), Gaps = 5/258 (1%)
Query: 41 SSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE 100
+ L EDP ++V L + L + + +R + WN++I + +
Sbjct: 202 AQVLKATEDPDQVVNNALLR---LYSEDGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKD 258
Query: 101 APKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCES 160
+A++ + M G+ TL +L ++ AL G+++H++ V+ + + +
Sbjct: 259 GVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLN 318
Query: 161 GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
+ +Y+K G + R+VF+ + L SWN +I G + +GR EA++ F + GF P
Sbjct: 319 SLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSP 378
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
D +T +++ S C G + ++ + + ++ L+D+ G+ GR+ A +
Sbjct: 379 DGITFIALLSGCSHAGLADDGCRLFE-MMKMDYGISPTVEHYACLVDVLGRAGRIKEALE 437
Query: 281 VFWEID-QPNVSSWTSMI 297
+ + +P S W S++
Sbjct: 438 IVKNMPFKPTGSIWGSLL 455
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 191 NAIIAGLSQDGRAKEAIDM--FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
N+ + LS+ G+ EA+ + + K PD +C S LE +++ +
Sbjct: 35 NSTLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 94
Query: 249 FQVKSKQKSDTL----MLNSLIDMYGKCGRMDLAYKVFWE----IDQPNVSSWTSMIVGY 300
+ + + L + LI ++ C R+D A +VF + +D P S W +M +GY
Sbjct: 95 LLYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPE-SVWVAMGIGY 153
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+ NG EAL ++ M + + F L AC G +Q G+ + + +P
Sbjct: 154 SRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATE-DPD 212
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
++ L G +EA + +GMP + NVV W L+ K
Sbjct: 213 QVVNNALLRLYSEDGCFDEALRVFDGMPHR-NVVSWNSLIAGLVK 256
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 224/379 (59%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +++ Y R+ + + M + G V+P+ TL +VL A L +GR + +
Sbjct: 197 WNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWS 256
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G+E++ S + +Y K G+ +AR+VFD ++ + +WNA+I G +Q+G + EAI
Sbjct: 257 KSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAI 316
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +KK G PD +T+ V SAC ++G LEL ++ Y ++ + +L+D
Sbjct: 317 SLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASC--RGLYNNVYVGTALVD 374
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG +D A +VF ++ NV+SW ++I G A NG +EA+ F MR E G++P+ +
Sbjct: 375 MYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDI 434
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V++GK +F + + +QI P+ HY CMVDLL R+G LEE +E
Sbjct: 435 TFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEK 494
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++GE V + +LEP + YVV S IYAS G ++
Sbjct: 495 IPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDS 554
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R M+ R + K P S
Sbjct: 555 AKMRGPMRERGVNKTPGCS 573
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L ++ L S++ I++YS D ARKVF+ P R + SWNA++ + G
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 204 KEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
E M + K G P+ VT+ V +AC GDL L V ++ + ++D+L+
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEW--SKSAGMETDSLVG 268
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
++L+ MY KCG + A +VF I +V +W +MI GYA NG++NEA+ FH M+++G+
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEE 379
P+ +T GVLSAC G ++ G + + +Y + G +VD+ + G L++
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYN----NVYVGTALVDMYAKCGDLDK 384
Query: 380 ARAMVEGMPMKANVVIWGCLM 400
A + M K NV W L+
Sbjct: 385 AIEVFRKMRCK-NVASWNALI 404
>gi|79456853|ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75116883|sp|Q683I9.1|PP295_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62890
gi|51968398|dbj|BAD42891.1| putative protein [Arabidopsis thaliana]
gi|332646886|gb|AEE80407.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 573
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 234/429 (54%), Gaps = 43/429 (10%)
Query: 78 HMLHSYSAAFHWNNIIR-LYTRLEAPKK--ALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
H+ H +F WN IIR + + +P++ + +Y+ M V PD +T P +L +
Sbjct: 16 HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNP 75
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF---------------------- 172
L +G++ H+ + GL+ + F + +++YS GD
Sbjct: 76 LHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVV 135
Query: 173 ---------EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-----KCGF 218
+ ARK+FDE PER + SW+ +I G G+ KEA+D+F ++ +
Sbjct: 136 NAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFV 195
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P++ TM +V SACG LG LE VH Y+ K + D ++ +LIDMY KCG ++ A
Sbjct: 196 RPNEFTMSTVLSACGRLGALEQGKWVHAYI--DKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 279 YKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNHVTFVGVLSACV 336
+VF + + +V ++++MI A GL +E F M S I PN VTFVG+L ACV
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G + EGK +F+MM + I P HYGCMVDL GR+GL++EA + + MPM+ +V+IW
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+ G++K E K L EL+P + GAYV+LSN+YA G W EV+ IR M+ +
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Query: 457 NLAKIPAYS 465
+ K+P S
Sbjct: 434 GINKVPGCS 442
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/407 (34%), Positives = 231/407 (56%), Gaps = 9/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
++C ++ ++ ++R ++ W +I + +AL ++ M +AG+
Sbjct: 492 ARCGSIKDARLLFNKMVRKDIIS-------WTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T +L A AL+ GR++H + GL ++ + +++YS G + AR+V
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD +R + ++NA+I G + KEA+ +F L++ G +PD VT +++ +AC + G L
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E A ++H V K SDT + N+L+ Y KCG A VF ++ + NV SW ++I
Sbjct: 665 EWAKEIHSLVL--KDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIG 722
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A +G + L F M+ GI+P+ VTFV +LSAC H G ++EG+ +F M + I
Sbjct: 723 GCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGIT 782
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYGCMVDLLGRAG L+E A+++ MP +AN IWG L+GAC GNV + E A+
Sbjct: 783 PTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAES 842
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L+P + YV LS++YA+ G+W+ ++R +M+ R + K P S
Sbjct: 843 SLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 889
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 189/350 (54%), Gaps = 13/350 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC + Q++ ++ ++ WN +I ++A +IY M R G++
Sbjct: 391 AKCGSYKDCRQVFEKLVNRDLIA-------WNTMIGGLAEGGNWEEASEIYHQMQREGMM 443
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ T I+L A AL GR++HS V+ G + ++ IS+Y++ G + AR +
Sbjct: 444 PNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLL 503
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ + + SW A+I GL++ G EA+ +F +++ G +P+ VT S+ +AC S L
Sbjct: 504 FNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAAL 563
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H+ V +++ +D + N+L++MY CG + A +VF + Q ++ ++ +MI
Sbjct: 564 DWGRRIHQQV--IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIG 621
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQI 357
GYAA+ L EAL F ++E G++P+ VT++ +L+AC + G ++ K + +K+ Y
Sbjct: 622 GYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLS 681
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ + +V + G +A + + M MK NV+ W ++G C + G
Sbjct: 682 DTSLGN--ALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHG 728
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 207/426 (48%), Gaps = 24/426 (5%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNII 93
HV A D + A + +KC ++ + +++ + + W II
Sbjct: 267 HVEAMKARLLFDV--NVANCILNMYAKCGSIHEAREVFDKM-------ETKSVVSWTIII 317
Query: 94 RLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLE 153
Y + A +I+ M + GV+P+ T VL A AL+ G+ +HS + G E
Sbjct: 318 GGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE 377
Query: 154 SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL 213
S+ + + +Y+K G ++ R+VF++ R L +WN +I GL++ G +EA +++ +
Sbjct: 378 SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM 437
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
++ G P+ +T V + +AC + L ++H V VK D + N+LI MY +CG
Sbjct: 438 QREGMMPNKITYVILLNACVNPTALHWGREIHSRV--VKDGFMFDISVQNALISMYARCG 495
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
+ A +F ++ + ++ SWT+MI G A +GL EAL F M+++G++PN VT+ +L+
Sbjct: 496 SIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILN 555
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPM 389
AC + G+ + + IE A +V++ G +++AR + + M
Sbjct: 556 ACSSPAALDWGRRIHQQV-----IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQ 610
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGLWEEVE 447
+ ++V + ++G K + LQE L+P Y+ + N A+ G E +
Sbjct: 611 R-DIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTYINMLNACANSGSLEWAK 668
Query: 448 RIRAVM 453
I +++
Sbjct: 669 EIHSLV 674
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 176/349 (50%), Gaps = 11/349 (3%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
+C ++ + Q++ + H+ WN ++ Y + ++AL + M + G+
Sbjct: 188 QCGSIEEARQVW-----NKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
T +L + ALE GR++H A++ L + + +++Y+K G +AR+VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ + + SW II G + G ++ A ++F +++ G P+ +T ++V +A L+
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALK 362
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
VH ++ + +SD + +L+ MY KCG +VF ++ ++ +W +MI G
Sbjct: 363 WGKTVHSHILN--AGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGG 420
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIE 358
A G EA + +H M+ G+ PN +T+V +L+ACV+ + G+ ++K+ + +
Sbjct: 421 LAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFD 480
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ ++ + R G +++AR + M ++ +++ W ++G K G
Sbjct: 481 --ISVQNALISMYARCGSIKDARLLFNKM-VRKDIISWTAMIGGLAKSG 526
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 161/312 (51%), Gaps = 6/312 (1%)
Query: 99 LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
+ +A+D+ ++ + G + +LK ++ L GR++H ++ +++
Sbjct: 119 ITGKDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYT 178
Query: 159 ESGFISLYSKAGDFEKARKVFDE--NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ I++Y + G E+AR+V+++ + ER + SWNA++ G Q G +EA+ + +++
Sbjct: 179 VNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQH 238
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G T + + S+C S LE ++H V +K++ D + N +++MY KCG +
Sbjct: 239 GLALGRATTMRLLSSCKSPSALECGREIH--VEAMKARLLFDVNVANCILNMYAKCGSIH 296
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +VF +++ +V SWT +I GYA G + A + F M++ G+ PN +T++ VL+A
Sbjct: 297 EAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ GK + N E A +V + + G ++ R + E + + +++ W
Sbjct: 357 GPAALKWGKTVHSHILNAGH-ESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAW 414
Query: 397 GCLMGACEKFGN 408
++G + GN
Sbjct: 415 NTMIGGLAEGGN 426
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 227/406 (55%), Gaps = 9/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++ + +I+ +++ ++ W +I Y + K+A + + M + G P
Sbjct: 176 KCGSINEARRIFDNLMNHDIIS-------WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP 228
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ T +L A AL+ +++H A+ GLE + + + +Y+K+G + AR VF
Sbjct: 229 NAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVF 288
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D R + SWN +I ++ GR EA D+F+ ++ G +PD + +S+ +AC S G LE
Sbjct: 289 DRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALE 348
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
++H++ S + D + +L+ MY K G +D A VF + NV SW +MI G
Sbjct: 349 WVKKIHRHALD--SGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISG 406
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
A +GL +AL+ F M G++P+ VTFV VLSAC H G V EG+ + M VY IEP
Sbjct: 407 LAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP 466
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+H CMVDLLGRAG L EA+ ++ M + + WG L+G+C +GNV++GE VAK
Sbjct: 467 DVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKER 526
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L+P + YV+LSNIYA G W+ V +R +M+ R + K P S
Sbjct: 527 LKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRS 572
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 168/320 (52%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + A+ ++ M GV P+ T I+LKA L AL+ G+++H+
Sbjct: 97 WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLES+ + + +Y K G +AR++FD + SW +I +Q G KEA
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYR 216
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + +++ GF+P+ +T VS+ +AC S G L+ +VH++ + + D + +L+ M
Sbjct: 217 LMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALD--AGLELDVRVGTALVQM 274
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +D A VF + +V SW MI +A +G +EA D F M+ G +P+ + F
Sbjct: 275 YAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMF 334
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +L+AC G ++ K + + +++ R +V + ++G +++AR + + M
Sbjct: 335 LSILNACASAGALEWVKKIHRHALDSGLEVDVRVG--TALVHMYSKSGSIDDARVVFDRM 392
Query: 388 PMKANVVIWGCLMGACEKFG 407
++ NVV W ++ + G
Sbjct: 393 KVR-NVVSWNAMISGLAQHG 411
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 156/303 (51%), Gaps = 8/303 (2%)
Query: 108 IYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
I + M+R G++ D + VLK + L +Q+H ++ +E N + + +
Sbjct: 13 IVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHV 72
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y + G ++AR VFD ++ SWNA+IAG + A++A+ +F + G +P+ T
Sbjct: 73 YIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTY 132
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+ + AC SL L+ +VH + +SD + +L+ MYGKCG ++ A ++F +
Sbjct: 133 MIILKACASLSALKWGKEVHACIRH--GGLESDVRVGTALLRMYGKCGSINEARRIFDNL 190
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
++ SWT MI YA +G EA M + G +PN +T+V +L+AC G ++ K
Sbjct: 191 MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVK 250
Query: 346 HFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ +++ R +V + ++G +++AR + + M ++ +VV W ++GA
Sbjct: 251 RVHRHALDAGLELDVRVG--TALVQMYAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFA 307
Query: 405 KFG 407
+ G
Sbjct: 308 EHG 310
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 124/247 (50%), Gaps = 7/247 (2%)
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI + + + G D V V C DL A QVH + +KS+ + + ++N+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCI--IKSRMEQNAHVMNN 68
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ +Y +CGR+ A VF + + + +SW +MI GY + A +A+ F M G++PN
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T++ +L AC ++ GK +++ +E ++ + G+ G + EAR +
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRH-GGLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA--YVVLSNIYASRGL 442
+ + M +++ W ++GA + GN K + +++ E + A YV + N AS G
Sbjct: 188 DNL-MNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQ-EGFKPNAITYVSILNACASEGA 245
Query: 443 WEEVERI 449
+ V+R+
Sbjct: 246 LKWVKRV 252
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 145/378 (38%), Positives = 226/378 (59%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y P +A+ I M G P+ T VL A +L L G+++H++ V
Sbjct: 282 WNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGV 341
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+GL S+ F + I +Y+K G AR VF+ + + ++ S+N +I G S+ ++++
Sbjct: 342 RIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEV-SYNILIIGYSETDDCLQSLN 400
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G +PD V+ V V SAC +L L+ +VH +++ S + NSL+D
Sbjct: 401 LFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVA--LRNHLYSHLFVSNSLLDF 458
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+D+A ++F +I +V+SW +MI+GY G A+ F MR+ ++ + V++
Sbjct: 459 YTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSY 518
Query: 329 VGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VLSAC HGG V+ G ++F EM+ ++EP HY CMVDLLGRAG +EEA +++ +
Sbjct: 519 IAVLSACSHGGLVERGWQYFSEMLAQ--RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQL 576
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ + IWG L+GAC +GNV++G A+HL EL+P G Y++LSNIYA G W+E
Sbjct: 577 PIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEAN 636
Query: 448 RIRAVMKHRNLAKIPAYS 465
+IR +MK R K P S
Sbjct: 637 KIRELMKSRGAKKNPGCS 654
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/441 (26%), Positives = 205/441 (46%), Gaps = 46/441 (10%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD+ + KC ++ L Q++ + + + WN+II
Sbjct: 143 LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS-------WNSIINGLACKGRCW 195
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
AL+ + M AG P+ T+ +L +L + G+++H ++R+G E++ F + I
Sbjct: 196 DALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLI 255
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K+G +A +F R + SWNA+IA + + EAI I +++ G P+ V
Sbjct: 256 DMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAV 315
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T +V AC LG L ++H V+ SD + NSLIDMY KCG + A VF
Sbjct: 316 TFTNVLPACARLGFLGPGKEIH--AMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVF- 372
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + S+ +I+GY+ ++L+ F MR G +P+ V+FVGV+SAC + +++
Sbjct: 373 NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 432
Query: 344 GK--HFFEMMKNVY-------------------QIEPRF---------AHYGCMVDLLGR 373
GK H + ++Y I R A + M+ G
Sbjct: 433 GKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGM 492
Query: 374 AGLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNVKMG-EWVAKHL-QELEPWSDG 428
G LE A +M E M ++ ++V + ++ AC G V+ G ++ ++ L Q LEP ++
Sbjct: 493 IGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLAQRLEP-TEM 551
Query: 429 AYVVLSNIYASRGLWEEVERI 449
Y + ++ G EE ++
Sbjct: 552 HYTCMVDLLGRAGFVEEAAKL 572
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 4/294 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN II L + +A + Y +M R+ + P+ ++ +L S L E+ R++H +
Sbjct: 79 WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 138
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V++GL+S + + Y K G + +VF+E E+ SWN+II GL+ GR +A+
Sbjct: 139 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 198
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ F + G +P+ VT+ S+ L + ++H F ++ ++D + NSLID
Sbjct: 199 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHG--FSMRMGTETDIFIANSLID 256
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY K G A +F +D+ N+ SW +MI YA N L EA+ M+E+G PN VT
Sbjct: 257 MYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 316
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
F VL AC G + GK M + F ++D+ + G L AR
Sbjct: 317 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS-NSLIDMYAKCGCLHSAR 369
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 9/293 (3%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R GV D +T P VLK F + G ++H + +LG +++ + + + LY G
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID-MFIGLKKCGFEPDDVTMVSVTS 230
AR++FDE PER + SWN II LS +G EA + F + + +P+ V+++S+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
+L D E+ ++H Y VK S N+L+D YGKCG + ++VF E + N
Sbjct: 121 ISAALEDEEMTRRIHCY--SVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
SW S+I G A G +AL+ F M ++G +PN VT +L V + GK H F
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
M E ++D+ ++G EA + + + N+V W ++
Sbjct: 239 SMRMGT---ETDIFIANSLIDMYAKSGHSTEASTIFHNLD-RRNIVSWNAMIA 287
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 227/418 (54%), Gaps = 11/418 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N + + + A I+ +HS A F WN ++ Y + E + ++++ M
Sbjct: 350 NEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQ 409
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
V PD TL ++L + +L L+ GRQ+HS +VR L ++ F SG + +YSK G
Sbjct: 410 HQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIG 469
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR +F++ ER + WN+II+GL+ KEA D F +++ G P + + S+ ++C
Sbjct: 470 IARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCS 529
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
L + Q+H V +K + + ++LIDMY KCG MD A F + N+ +W
Sbjct: 530 RLSSIPHGRQIHAQV--MKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 587
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
MI GYA NGL ++A++ F YM + +P+ VTF+ VL+ C H G V + FF M+N
Sbjct: 588 NEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMEN 647
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HY C++D LGRAG E A++ MP K + +IW L+ AC N ++G+
Sbjct: 648 SYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGK 707
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
A+HL ++P + YV+LSNIYAS G + +RA+M +R + K YS + D
Sbjct: 708 CAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWIDQKD 765
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 138/273 (50%), Gaps = 11/273 (4%)
Query: 86 AFHWNNIIRLYTRLEAPK-KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
A WN +I R +A+++Y M G+LP +TL VL A L AL GR+ H
Sbjct: 105 AVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCH 164
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+AV++GL++N+F E+ + +Y+K G A ++F S+ A++ GL+Q G
Sbjct: 165 GVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSID 224
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE--------LALQVHKYVFQVKSKQK 256
+A+ +F + + G D V++ SV AC + L +H V V+
Sbjct: 225 DALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALV--VRKGFG 282
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
SD + NSLIDMY KC MD A KVF + + SW +I G+ G +A++ M
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLM 342
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
+E+G PN VT+ +L++C+ V + F+
Sbjct: 343 QEAGFEPNEVTYSNLLASCIKARDVHSARAMFD 375
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 180/378 (47%), Gaps = 21/378 (5%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
L R+C++ V++S+ A+ AT S I+A ++R
Sbjct: 229 LFARMCRSGVPVDPVSVSSVLGAC------AQACATDYSVARAFRLGQAIHALVVRK--- 279
Query: 81 HSYSAAFH-WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+ + H N++I +YT+ +A+ ++ + ++ + I++ Q +
Sbjct: 280 -GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIV----SWNILITGFGQEGSCAK 334
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
++ SL G E NE S ++ KA D AR +FD+ + +WN +++G Q
Sbjct: 335 AVEVLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQ 394
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ + ++ I++F ++ +PD T+ + S+C LG L+ QVH V+ +D
Sbjct: 395 EEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSA--SVRFLLHNDM 452
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ + L+DMY KCG++ +A +F ++ + +V W S+I G + L EA D F MRE+
Sbjct: 453 FVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMREN 512
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
GI P ++ ++++C + G+ ++MK+ Y ++D+ + G ++
Sbjct: 513 GIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVG--SALIDMYAKCGNMD 570
Query: 379 EARAMVEGMPMKANVVIW 396
+AR + M MK N+V W
Sbjct: 571 DARLFFDTMMMK-NIVAW 587
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 19/319 (5%)
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD-GRAK 204
LA R N++ + +S +AGD + AR + P R SWN +I+ L++ G
Sbjct: 64 LAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGG 123
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA++M+ ++ G P T+ SV SACG L L + H VK ++ + N+
Sbjct: 124 EAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVA--VKVGLDANQFVENA 181
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ MY KCG + A ++F+ + +PN S+T+M+ G A G ++AL F M SG+ +
Sbjct: 182 LLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVD 241
Query: 325 HVTFVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFA-----HYG-CMVDLLGRAGLL 377
V+ VL AC F + + ++ + R H G ++D+ + +
Sbjct: 242 PVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEM 301
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE--LEP----WSD--GA 429
+EA + E +P +V W L+ + G+ V +QE EP +S+ +
Sbjct: 302 DEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS 360
Query: 430 YVVLSNIYASRGLWEEVER 448
+ +++++R +++++ R
Sbjct: 361 CIKARDVHSARAMFDKISR 379
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 214/366 (58%), Gaps = 2/366 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y E KA+ + M G D T+ +L + Q L G+ +H+ +
Sbjct: 226 WNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGI 285
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G +S+ + IS+YSK GD AR +FD + SW A+IAG ++ G EA+
Sbjct: 286 QVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMT 345
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G +PD VT++S+ S CG G LEL + Y + K + ++ N+LID+
Sbjct: 346 LFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYA--TANGLKDNLMVCNALIDV 403
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A ++F+ + + ++ SWT++I G A NG EAL F M E G++PNH+TF
Sbjct: 404 YAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITF 463
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL AC H G +++G F +M VY+I P HY CM DLLGR G L+EA ++ MP
Sbjct: 464 LAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMP 523
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K +V IW L+ AC+ NV +GE VA HL ELEP + YV ++NIYAS G W+ V
Sbjct: 524 FKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAA 583
Query: 449 IRAVMK 454
IR +MK
Sbjct: 584 IRTMMK 589
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 176/413 (42%), Gaps = 50/413 (12%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+ I KAL ++ M + G+ P+ T P V KA +L L+ + +H+
Sbjct: 21 QWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHV 80
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ +++ F ++ + +Y K A +F P R + SWN++I G +Q G +
Sbjct: 81 VKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVV 140
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G D VT++ +T + SL DL++ +H F +K +D + N+ I
Sbjct: 141 SLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHS--FGIKIGIDTDVSVSNTWIA 198
Query: 268 MYGKCGRMDLAYKVFWEIDQ--PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
Y KCG LA VF ID+ SW SMI GYA ++A+ F M G R +
Sbjct: 199 AYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADL 258
Query: 326 VTFVGVLSACV------HG-----------------------------GKVQEGKHFFEM 350
T + +LS+CV HG G + ++ F+
Sbjct: 259 STILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDN 318
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEGMPMKANVVIWGCLMGACEKFG 407
M ++ + M+ G L+EA + +E + K ++V LM C + G
Sbjct: 319 MLGKTRVS-----WTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTG 373
Query: 408 NVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL 458
+++G+W+ + D V L ++YA G + + M ++L
Sbjct: 374 ALELGKWIDTYATA-NGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSL 425
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN+ I G A +A+ +F +K+ G EP+++T SV AC L +L+ + VH
Sbjct: 19 VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+V VKS+ ++D + S++DMY KC ++ AY +F + +V+SW SMI G+A G
Sbjct: 79 HV--VKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFV 136
Query: 307 NEALDCFHYMRESGIRPNHVTFVGV 331
+ + F M GIR + VT +G+
Sbjct: 137 DRVVSLFCEMGIEGIRADSVTVIGL 161
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
V+ W S I G A++AL F M+++G+ PN++TF V AC
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKAC 64
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 233/447 (52%), Gaps = 66/447 (14%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N+++R + P+K + +Y M + GV PD YT VLKA +L G H VR
Sbjct: 47 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 106
Query: 150 LGLESNEFCESGFI-------------------------------SLYSKAGDFEKARKV 178
G NE+ ++ I S Y+K G ++A ++
Sbjct: 107 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 166
Query: 179 FDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEAI 207
FDE P E+ + +WNA+I+G G KEA+
Sbjct: 167 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 226
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNS 264
+F ++ G PD VT++S+ SAC LGDLE ++H Y+ + S S T + N+
Sbjct: 227 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 286
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG +D A +VF + ++S+W ++IVG A + A +++ F M+ + PN
Sbjct: 287 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPN 345
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+GV+ AC H G+V EG+ +F +M+++Y IEP HYGCMVD+LGRAG LEEA V
Sbjct: 346 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 405
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
E M ++ N ++W L+GAC+ +GNV++G++ + L + G YV+LSNIYAS G W+
Sbjct: 406 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 465
Query: 445 EVERIRAVMKHRNLAKIPAYSLATRLD 471
V+++R + + K SL D
Sbjct: 466 GVQKVRKMFDDTRVKKPTGVSLIEEDD 492
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
WN +I Y PK+AL I+ M AG PD T+ +L A L LE G++LH
Sbjct: 209 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 268
Query: 145 -SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+ +V + + I +Y+K G ++A +VF +R L +WN +I GL+ A
Sbjct: 269 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 327
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +I+MF +++ P++VT + V AC G +V +K +LM
Sbjct: 328 EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG-------------RVDEGRKYFSLMR- 373
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
DMY +PN+ + M+ G EA F ++ I P
Sbjct: 374 ---DMYNI---------------EPNIKHYGCMVDMLGRAGQLEEA---FMFVESMKIEP 412
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
N + + +L AC G V+ GK+ E + ++ + E
Sbjct: 413 NAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE 447
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 131/329 (39%), Gaps = 74/329 (22%)
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
S G + A K+FDE P+ + N ++ G +Q + ++ + ++ ++K G PD T
Sbjct: 23 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 82
Query: 227 SVTSACGSL-----------------------------------GDLELALQV------- 244
V AC L GDL +A ++
Sbjct: 83 FVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKA 142
Query: 245 HKYVFQVKS-----KQKSDTLM-------------LNSLIDMYGKCGRMDLAYKVFWEID 286
HK + + + K D M N +I KC MD A ++F
Sbjct: 143 HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFT 202
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK- 345
+ +V +W +MI GY G EAL F MR++G P+ VT + +LSAC G ++ GK
Sbjct: 203 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 262
Query: 346 ---HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGC 398
+ E I + ++D+ + G ++ A + G+ + N +I G
Sbjct: 263 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 322
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ E G+++M E +Q L+ W +
Sbjct: 323 ALHHAE--GSIEMFE----EMQRLKVWPN 345
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 236/431 (54%), Gaps = 31/431 (7%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNII----------RLYTRLEAPKK--------- 104
L L Q++AHII + + S S +++ RL+ + P
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163
Query: 105 ------ALDIYIFMSR---AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
++D +F R +G YT V+KA L AL +G+++HS + G S+
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 223
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
+ ++ I+LY+KA D + A+KVFD P+R + +WN++I+G Q+G +E+I +F + +
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
GF+PD T+VS+ S+C LG L+ +H Y + + ++ SLI+MY +CG +
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYA--DGNGFDLNVVLGTSLINMYTRCGNV 341
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A +VF + + NV +WT+MI GY +G +A++ F MR G RPN++TFV VLSAC
Sbjct: 342 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 401
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG-MPMKANVV 394
H G + +G+ F MK Y + P H CMVD+ GRAGLL +A ++ +P +
Sbjct: 402 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 461
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
+W ++GAC N +G VA+H+ +EP + G YV+LSNIYA G + VE +R +M
Sbjct: 462 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 521
Query: 455 HRNLAKIPAYS 465
R L K YS
Sbjct: 522 RRRLKKQVGYS 532
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 221/415 (53%), Gaps = 33/415 (7%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
S+ WN +I Y++ L +Y M +G PD L VL A L G+
Sbjct: 178 SHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGK 237
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP------------------ 183
+H G ++ +++Y+ G AR+V+D+ P
Sbjct: 238 AIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLG 297
Query: 184 -------------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
E+ L W+A+I+G ++ + EA+ +F +++ PD +TM+SV S
Sbjct: 298 MVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVIS 357
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC ++G L A +H Y K+ + N+LIDMY KCG + A +VF + + NV
Sbjct: 358 ACANVGALVQAKWIHTYA--DKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNV 415
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW+SMI +A +G A+ A+ FH M+E I PN VTF+GVL AC H G V+EG+ FF
Sbjct: 416 ISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSS 475
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M N ++I P+ HYGCMVDL RA L +A ++E MP NV+IWG LM AC+ G ++
Sbjct: 476 MINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIE 535
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+GE+ A L ELEP DGA VVLSNIYA W++V +R +MKH+ ++K A S
Sbjct: 536 LGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACS 590
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 195/409 (47%), Gaps = 53/409 (12%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N ++R ++R P+ L +Y+ + R G D ++ P +LKA +L AL +G ++H LA +
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143
Query: 150 LG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ++ F +S I++Y+ G AR +FD+ R + +WN +I G SQ+ +
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLMLNS 264
++ +K G EPD + + +V SAC G+L +H+++ F+V S ++ S
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQT------S 257
Query: 265 LIDMYGKCGRMDLAYKVFWEID-------------------------------QPNVSSW 293
L++MY CG M LA +V+ ++ + ++ W
Sbjct: 258 LVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCW 317
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMM 351
++MI GYA + EAL F+ M+ I P+ +T + V+SAC + G + + K H +
Sbjct: 318 SAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK 377
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ P ++D+ + G L +AR + E MP K NV+ W ++ A G+
Sbjct: 378 NGFGRTLPI---NNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDADS 433
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASR--GLWEEVERIRAVM--KHR 456
+ ++E +G + +YA GL EE ++ + M +HR
Sbjct: 434 AIALFHRMKEQNIEPNGV-TFIGVLYACSHAGLVEEGQKFFSSMINEHR 481
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ A +F P N ++ S+ + + +++ L++ GF D + + A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
L L L L++H + +D + ++LI MY CGR+ A +F ++ +V
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFH-ADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVV 183
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+W MI GY+ N + L + M+ SG P+ + VLSAC H G + GK + +
Sbjct: 184 TWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFI 243
Query: 352 K-NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
K N +++ +V++ G + AR + + +P K ++V+ ++ K G V+
Sbjct: 244 KDNGFRVGSHIQ--TSLVNMYANCGAMHLAREVYDQLPSK-HMVVSTAMLSGYAKLGMVQ 300
Query: 411 MGEWVAKHL--QELEPWSD--GAYVVLSNIYASRGLWEEVERIRAV 452
++ + ++L WS Y + L+ E++R R V
Sbjct: 301 DARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIV 346
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/466 (33%), Positives = 246/466 (52%), Gaps = 63/466 (13%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAA-----------------------------FHWNN 91
CT + L +I++ +I+T + +AA F WN
Sbjct: 32 CTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCASPAGDINYAYLVFVQIQNPNIFAWNT 91
Query: 92 IIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
IIR ++R P+ ++ +YI M + V P T P V KA QL G QLH ++L
Sbjct: 92 IIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAFAQLDLASEGAQLHGKMIKL 151
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPE-------------------------- 184
GLE++ F + + +Y G +ARKVFD +
Sbjct: 152 GLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLF 211
Query: 185 -----RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
R SWN++I+G ++GR +A+++F ++ EP + TMVS+ +AC LG +
Sbjct: 212 DKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIR 271
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+H Y+ VK K + + +++ ++IDMY KCG +D A +VF + +S W SMI+G
Sbjct: 272 QGEWIHDYM--VKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILG 329
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
A NG NEAL F ++ S +RP+ V+F+ VL+AC H G V + K +F +M++ Y+I+P
Sbjct: 330 LAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKP 389
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
H+ CMVD+LGRAGLLEEA ++ M + + +IWG L+ +C K+GN+KM + A HL
Sbjct: 390 GIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKYGNIKMAKRAANHL 449
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
EL P ++V+++N YA+ +EE + R +K ++ K P S
Sbjct: 450 IELNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCS 495
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 200/304 (65%), Gaps = 1/304 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ Y+K G+ E ARK+FDE P+R + +WNA+IAG G ++A++MF ++ G PD+
Sbjct: 217 ITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDE 276
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VTM+S+ SAC LGDL+ ++H + ++ + S L+ N+LIDMY KCG + A +VF
Sbjct: 277 VTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLS-VLLGNALIDMYAKCGSIVRALEVF 335
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + +VS+W S++ G A +G A +++ F MR+ IRP+ +TFVGVL AC H G+V+
Sbjct: 336 QGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVE 395
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG+ +F++M++ Y IEP HYGCMVDLLGRAGLL EA ++ M ++ N ++W L+GA
Sbjct: 396 EGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGA 455
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++G L ++ G YV+LSNIYASRG W+ VE++R +M + K
Sbjct: 456 CRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEA 515
Query: 463 AYSL 466
SL
Sbjct: 516 GCSL 519
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 44/332 (13%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH + H+ + F WN +IR + +P A+ +Y M V PD +T P VLKA
Sbjct: 65 YAHQLFPHI--TEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKA 122
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+L +++G +H RLG ESN F + I ++ GD AR +FD + +R + +W
Sbjct: 123 CTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAW 182
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+A+ AG ++ G A +F D++ +
Sbjct: 183 SALTAGYARRGELGVARQLF----------DEMPV------------------------- 207
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
D + N +I Y K G M+ A K+F E+ + +V +W +MI GY G +AL
Sbjct: 208 ------KDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQAL 261
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F MR G P+ VT + +LSAC G + G+ + + + ++D+
Sbjct: 262 EMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDM 321
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G + A + +GM K +V W ++G
Sbjct: 322 YAKCGSIVRALEVFQGMREK-DVSTWNSVLGG 352
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 36/259 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++AL+++ M G LPD T+ +L A L L+ G+++H
Sbjct: 244 WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCIS 303
Query: 149 RLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+G + + I +Y+K G +A +VF E+ + +WN+++ GL+ G A+++I
Sbjct: 304 EMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSI 363
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++K PD++T V V AC G +E + +Q D
Sbjct: 364 HLFTEMRKLKIRPDEITFVGVLVACSHAGRVE------------EGRQYFDL-------- 403
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M Y + +PN+ + M+ GL NEA D M+ I PN +
Sbjct: 404 -------MRDEYNI-----EPNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIV 448
Query: 328 FVGVLSACVHGGKVQEGKH 346
+ +L AC G V+ G+
Sbjct: 449 WRTLLGACRIHGNVELGRR 467
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 126/286 (44%), Gaps = 14/286 (4%)
Query: 141 RQLHSLAVRLGLESNEFC--ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+H+ + G SN E + S + +G A ++F E WN +I G +
Sbjct: 30 KQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSA 89
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q AI ++ ++ PD T V AC L +++ VH VF++ +S+
Sbjct: 90 QSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGF--ESN 147
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T + N+LI + CG + +A +F + +V +W+++ GYA G A F M
Sbjct: 148 TFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPV 207
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGL 376
+ V++ +++ G+++ + F+ + ++V A Y +
Sbjct: 208 KDL----VSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEM 263
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
EE R++ E +P + ++ L+ AC G++ G+ + + E+
Sbjct: 264 FEEMRSVGE-LPDEVTML---SLLSACTDLGDLDAGQRIHCCISEM 305
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 22/245 (8%)
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI--DMYGKCGRMDLAYKVFWEIDQP 288
+C ++G L+ Q+H + + S+T L LI G M A+++F I +P
Sbjct: 22 SCTTIGTLK---QIHASM--IVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEP 76
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+ W +MI G A + A+ + M +RP+ TF VL AC V+ G F
Sbjct: 77 DTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMG---F 133
Query: 349 EMMKNVYQI--EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+ V+++ E ++ G L ARA+ +G K +VV W L +
Sbjct: 134 GVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG-SAKRDVVAWSALTAGYARR 192
Query: 407 GNVKMGEWVAKHLQELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVMKHRNL----AKI 461
G + VA+ L + P D ++ V+ YA RG E ++ + R++ A I
Sbjct: 193 GELG----VARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMI 248
Query: 462 PAYSL 466
Y L
Sbjct: 249 AGYVL 253
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 231/410 (56%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + ++AL+IY M + G P+ + ++ A + A+ G QLH V
Sbjct: 285 WGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVV 344
Query: 149 RLGLESNEFCESGFISLYS-------------------------------KAGDFEKARK 177
+ G + F ++ I Y+ K G + A K
Sbjct: 345 KRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALK 404
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
FD+ R + SW+ +I+G +Q K A+++F + G +P++VTMVSV SA +LG
Sbjct: 405 TFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGT 464
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTS 295
L+ H+Y+ + +S +D L +LIDMY KCG ++ A + F +I + +VS W +
Sbjct: 465 LQEGKLAHEYM-RSESIPFNDNLRA-ALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNA 522
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I G A++G A+ L+ F M+ I+PN +TF+GVLSAC H G V+ GK F+ MK+ Y
Sbjct: 523 IICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAY 582
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+EP HYGCM+D+LGRAGLLEEA M+ MPM+A++VIWG L+ AC GNV +GE
Sbjct: 583 NVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERA 642
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A++L L P G V+LSNIYA+ G WEEV +R+VM+ + + + P YS
Sbjct: 643 AENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 126/277 (45%), Gaps = 60/277 (21%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF--------------- 172
LK+ L + GRQ+HSL +LGL N F ++ I++Y+K GD
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 173 ----------------EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ ARK+FD P + S+ +I G Q+G +EA+++F ++ C
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLM------------ 261
G P+D+T+V+V SAC LG++ VH V F V S LM
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREA 239
Query: 262 --------------LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
N +++ Y K G +D A ++F I +V SW +MI GY G
Sbjct: 240 RRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLR 299
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
EAL+ + M ++G PN V V ++SAC G + +G
Sbjct: 300 EALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDG 336
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 64/313 (20%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++AL+++ M GV+P+ TL V+ A L + R +H L V++ + +
Sbjct: 167 REALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNL 226
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS------------------------ 198
+ Y +AR++FDE PER L +WN ++ G +
Sbjct: 227 MHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWG 286
Query: 199 -------QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
Q GR +EA++++ + + G P++V +V++ SACG + Q+H V V
Sbjct: 287 TMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTV--V 344
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDL-------------------------------AYK 280
K + ++I Y CG MDL A K
Sbjct: 345 KRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALK 404
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
F ++ +V SW++MI GYA + AL+ FH M GI+PN VT V V SA G
Sbjct: 405 TFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGT 464
Query: 341 VQEGKHFFEMMKN 353
+QEGK E M++
Sbjct: 465 LQEGKLAHEYMRS 477
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N + H ++T F W+ +I Y + E PK AL+++ M G+ P+ T+ V
Sbjct: 396 NGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSV 455
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE--NPER 185
A L L+ G+ H + N+ + I +Y+K G A + F++ +
Sbjct: 456 FSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVS 515
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+ WNAII GL+ G A +++F +++ +P+ +T + V SAC G +E ++
Sbjct: 516 SVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIF 575
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
K + + D +ID+ G+ G ++ A ++ + + ++ W +++ +G
Sbjct: 576 K-TMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHG 634
Query: 305 LAN 307
N
Sbjct: 635 NVN 637
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 49/270 (18%)
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG-------- 273
++ +VS +C SL + Q+H +F++ +T + NSLI+MY KCG
Sbjct: 53 ELALVSALKSCSSLSFISQGRQIHSLIFKLG--LHFNTFIQNSLINMYAKCGDIKNAQLL 110
Query: 274 -----------------------RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++D A K+F + S+T+MI+G+ NG EAL
Sbjct: 111 FDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREAL 170
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ-----IEPRFAHYG 365
+ F MR G+ PN +T V V+SAC H G+V + ++ ++ + H
Sbjct: 171 EVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
C+ + EAR + + MP + N+V W ++ K G V + + + +
Sbjct: 231 CLCS------GVREARRLFDEMPER-NLVTWNVMLNGYAKTGLVDEARELFDGICDKDVI 283
Query: 426 SDGAYVVLSNIYASRG-LWEEVERIRAVMK 454
S G + + Y +G L E +E RA+++
Sbjct: 284 SWGTMI---DGYIQKGRLREALEIYRAMLQ 310
>gi|224119882|ref|XP_002318186.1| predicted protein [Populus trichocarpa]
gi|222858859|gb|EEE96406.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/500 (32%), Positives = 252/500 (50%), Gaps = 73/500 (14%)
Query: 37 ISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHII--------------------- 75
IS++S+ + T ++ I+ + +C + QL+Q++A+ I
Sbjct: 3 ISSSSNHI-TPQNYHSIIIKLIKQCKTISQLHQLHAYTITNTPLSFHSSPSLLTKFLYTL 61
Query: 76 --------RTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
T +LH + F+ +N IIR++T L P AL + M R V
Sbjct: 62 TTKAKSKSSTSLLHYAKSIFNSIQNPSTFCYNTIIRVHTLLSFPIPALHFFTQMRRLSVP 121
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY------------ 166
D ++ P LKA QL + R LH ++ G S+ + + I Y
Sbjct: 122 LDSHSFPFTLKACAQLGGVFSARCLHCQVLKFGFLSDLYVMNSLIHGYMVSDMSNDAYKV 181
Query: 167 -------------------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
KAGD KAR++FD P R SWN IIAG ++ +EAI
Sbjct: 182 FDESPQRDVVSYNVLIDGFVKAGDVVKARELFDLMPVRDSVSWNTIIAGCAKGDYCEEAI 241
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + PD+V +VS SAC LG+LE ++H Y+ ++ K DT + L+D
Sbjct: 242 ELFDFMMDLEIRPDNVALVSTLSACAQLGELEKGKKIHDYI--ERNAMKVDTFLSTGLVD 299
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG +D+A K+F N+ +W +M+VG A +G L+ F M E+G++P+ ++
Sbjct: 300 FYAKCGCVDIALKIFDSSSDKNLFTWNAMLVGLAMHGYGELLLEYFSRMIEAGVKPDGIS 359
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+GVL C H G V E + F+ M++VY + HYGCM DLLGRAGL+++ M++ M
Sbjct: 360 ILGVLVGCSHSGLVDEARKLFDEMESVYGVPREPKHYGCMADLLGRAGLIKKVMEMIKDM 419
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P ++ +W L+G C G+V++ E AKHL EL+P G Y +L+N+YA+ WE+V
Sbjct: 420 PRGGDMSVWSGLLGGCRIHGDVEIAEKAAKHLMELKPDDGGVYSILANVYANAERWEDVM 479
Query: 448 RI-RAVMKHRNLAKIPAYSL 466
I R++ +R + KI +SL
Sbjct: 480 NIRRSLSSNRVVTKIAGFSL 499
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/431 (35%), Positives = 236/431 (54%), Gaps = 31/431 (7%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNII----------RLYTRLEAPKK--------- 104
L L Q++AHII + + S S +++ RL+ + P
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99
Query: 105 ------ALDIYIFMSR---AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
++D +F R +G YT V+KA L AL +G+++HS + G S+
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
+ ++ I+LY+KA D + A+KVFD P+R + +WN++I+G Q+G +E+I +F + +
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
GF+PD T+VS+ S+C LG L+ +H Y + + ++ SLI+MY +CG +
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYA--DGNGFDLNVVLGTSLINMYTRCGNV 277
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A +VF + + NV +WT+MI GY +G +A++ F MR G RPN++TFV VLSAC
Sbjct: 278 SKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSAC 337
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG-MPMKANVV 394
H G + +G+ F MK Y + P H CMVD+ GRAGLL +A ++ +P +
Sbjct: 338 AHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPA 397
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
+W ++GAC N +G VA+H+ +EP + G YV+LSNIYA G + VE +R +M
Sbjct: 398 VWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMT 457
Query: 455 HRNLAKIPAYS 465
R L K YS
Sbjct: 458 RRRLKKQVGYS 468
>gi|224089225|ref|XP_002308660.1| predicted protein [Populus trichocarpa]
gi|222854636|gb|EEE92183.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 208/353 (58%), Gaps = 6/353 (1%)
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY----SKAGDFE 173
LP+ +T P VLKA + L +G+ +H ++ G ++ + +Y G E
Sbjct: 7 LPNKFTYPFVLKACAGIGNLNLGKSVHGSVMKFGFGDEVNVQNTLVHMYCCCRGGEGGIE 66
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
ARKVFDE + SW+A+I G + GR+ +AI++F ++ G PD++TMVSV SAC
Sbjct: 67 FARKVFDEMYKSDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACT 126
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL V YV K + + + + N+LIDM+ KCG +D A +F + + N+ SW
Sbjct: 127 GLGALELGKWVESYV--EKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSW 184
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
TS+I G A +G EA+ F M SG+ P+ V F+G+LSAC H G V +GK +F+ M+
Sbjct: 185 TSVIGGLAMHGRGVEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVDKGKRYFDSMRK 244
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P+ HYGCMVD+L RAGL++EA V+ MP+ N V+W L+ AC G +K+GE
Sbjct: 245 DFSIVPKIEHYGCMVDMLCRAGLVKEALKFVQEMPIDPNPVVWRTLINACRAHGELKLGE 304
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ + L EP + YV+LSNIYA WE+ RIR M + + KIP ++
Sbjct: 305 KITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTM 357
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 146/318 (45%), Gaps = 39/318 (12%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S + W+ +I Y R+ A++++ M GV PD T+ VL A L ALE+G+ +
Sbjct: 78 SDSVSWSAMIGGYVRVGRSSDAINLFREMQIKGVCPDEITMVSVLSACTGLGALELGKWV 137
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
S + ++ N + I +++K GD +KA +F ER + SW ++I GL+ GR
Sbjct: 138 ESYVEKERVQKNVELSNALIDMFAKCGDVDKATNLFRSMRERNIVSWTSVIGGLAMHGRG 197
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
EA+ +F + + G PDDV + + SAC G ++ K K+ D++
Sbjct: 198 VEAVAVFEEMVRSGVTPDDVVFIGLLSACSHSGLVD------------KGKRYFDSM--- 242
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
R D + P + + M+ GL EAL +++E I P
Sbjct: 243 ----------RKDFSI-------VPKIEHYGCMVDMLCRAGLVKEAL---KFVQEMPIDP 282
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEEARA 382
N V + +++AC G+++ G+ ++ + + + EP ++Y + ++ + E+
Sbjct: 283 NPVVWRTLINACRAHGELKLGE---KITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTR 339
Query: 383 MVEGMPMKANVVIWGCLM 400
+ E M MK I G M
Sbjct: 340 IREAMDMKGMKKIPGSTM 357
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 260/484 (53%), Gaps = 40/484 (8%)
Query: 2 LSLVPGISLSSLRMKSSHPLLHRLC-------KTHTFRKHVTISAASSFLDTHEDPAKIV 54
LSL P S +KS L + LC + F I AS+ +D +
Sbjct: 80 LSLHPNRSTFPCTIKSCSSL-YDLCAGKQIHQQAFVFGYGSDIFVASALIDMY------- 131
Query: 55 ATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDI------ 108
SKC L +++ I +++ W ++I Y + E ++A+ +
Sbjct: 132 ----SKCGYLNDARKLFDEIPERNVVS-------WTSMISGYVQNERAREAVFLFKEFLL 180
Query: 109 -----YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
Y + GV D L V+ A ++ + +H LAV+ G E + +
Sbjct: 181 VDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLM 240
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDD 222
Y+K G+ +RKVFD E + SWN++IA +Q+G + EA +F + K G +
Sbjct: 241 DAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNA 300
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+ +V AC G L++ +H V VK + + + ++ S++DMY KCGR+++A K F
Sbjct: 301 VTLSAVLLACAHSGALQIGKCIHDQV--VKMELEDNLVVGTSIVDMYCKCGRVEMARKAF 358
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + NV SWT M+ GY +G EA+ F+ M GI+PN++TFV VL+AC H G ++
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLK 418
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG H+F MK + +EP HY CMVDLLGRAG L+EA +++ M +K + ++WG L+GA
Sbjct: 419 EGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGA 478
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C NV++GE A+ L +L+P + G YV+LSNIYA G W++VER+R +MK+ L K P
Sbjct: 479 CRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTP 538
Query: 463 AYSL 466
YS+
Sbjct: 539 GYSI 542
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 168/331 (50%), Gaps = 16/331 (4%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
++ + WN+II + R +AL + M + + P+ T P +K+ L+ L G+Q+
Sbjct: 49 TSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQI 108
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H A G S+ F S I +YSK G ARK+FDE PER + SW ++I+G Q+ RA
Sbjct: 109 HQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERA 168
Query: 204 KEAIDM---FIGLKKCGFEP--------DDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+EA+ + F+ + + ++ D V + V SAC + + VH VK
Sbjct: 169 REAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHG--LAVK 226
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
+ + N+L+D Y KCG + ++ KVF +++ +V SW S+I YA NGL+ EA
Sbjct: 227 KGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286
Query: 313 FHYMRESG-IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F M + G +R N VT VL AC H G +Q GK + + + ++E +VD+
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM-ELEDNLVVGTSIVDMY 345
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G +E AR + + K NV W ++
Sbjct: 346 CKCGRVEMARKAFDRLKRK-NVKSWTVMVAG 375
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+D+ +V SW S+I +A +G + +AL F MR+ + PN TF + +C + G
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
K + V+ ++D+ + G L +AR + + +P + NVV W
Sbjct: 106 KQIHQ-QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPER-NVVSW 155
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 237/439 (53%), Gaps = 11/439 (2%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVA--TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
H R + A S L +H +P + + + +KC L + +++ + + +
Sbjct: 540 HPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEM-------PHPST 592
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +I Y ++A+ + G+ PD +T VL A ++ L G +
Sbjct: 593 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 652
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A + G+ + F + + LY K G+ KAR+VFD+ + +W A++ G + +G +EA
Sbjct: 653 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 712
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+D+F+ ++ G +PD + SAC LG L+L Q + V + + ++ +LI
Sbjct: 713 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDW--DEFLDNPVLGTALI 770
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG A+ VF ++ + ++ W +MI+G G A M +SG++ N
Sbjct: 771 DMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDN 830
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+G+L +C H G +Q+G+ +F M +Y I PR HYGCMVDLL RAGLL+EA +V+
Sbjct: 831 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 890
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MPM AN VI G L+G C+ N ++ E V K L LEPW+ G YV+LSNIY++RG WE+
Sbjct: 891 MPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDA 950
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R MK + + K+PA S
Sbjct: 951 AKLRLDMKAKGVEKVPACS 969
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/473 (32%), Positives = 240/473 (50%), Gaps = 72/473 (15%)
Query: 42 SFLDTHEDPAKIVATQLSK--CTNLLQLNQIYAHIIRTHMLHSY-----------SAAFH 88
S L + P + T S+ + L Q QI+AHII+TH H+ S +
Sbjct: 67 STLKFNPTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQ 126
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I YT+ P+ AL++Y + + D + P VLKA Q+ ++G+++H +
Sbjct: 127 WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK--------------------LG 188
+ GL+ + F + + +Y + E AR VFD+ ER LG
Sbjct: 187 KKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLG 246
Query: 189 ---------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
SW A+IAG + R +E +FI +++ P+++TM++
Sbjct: 247 LARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN------ 300
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
K + + D ++ +L+DMY KCG ++ A ++F E ++ W
Sbjct: 301 ------------------KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 342
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I G+A +G EALD F M G++PN +TF+G+L AC H G V EGK FE M +
Sbjct: 343 NAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVH 402
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ + P+ HYGCMVDLLGRAGLL+EA M++ MP+K N ++WG L+ AC N ++GE
Sbjct: 403 TFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGE 462
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A L E+EP + G V++SNIYA+ W + +R MK + K P +S+
Sbjct: 463 LAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSV 515
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 216/380 (56%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL +Y M G D +TL VL + L G Q H+ A+
Sbjct: 209 WNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAI 268
Query: 149 RLGLESNEFCESGFISLYSKAG-DFEKARKVFDENPERKLGSWNAIIAGLSQDGR-AKEA 206
+ G N SG I +Y+K G ++RKVF+E L WN +I+G SQ+ + EA
Sbjct: 269 KTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEA 328
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-SL 265
++ F +++ G+ PDD + V SAC +L Q H +KS+ S+ + +N +L
Sbjct: 329 LECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFH--ALAMKSEIPSNQISVNNAL 386
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG + A K+F + Q N + S+I GYA +G+ E+L+ F M + I P
Sbjct: 387 VTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTS 446
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+T V +LSAC H G+V+EGK +F MMK+++ IEP HY CM+DLLGRAG L EA +++
Sbjct: 447 ITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLID 506
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP W L+GAC K+GN+++ E A +LEP + Y++L+++Y++ WEE
Sbjct: 507 TMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEE 566
Query: 446 VERIRAVMKHRNLAKIPAYS 465
RIR +M+ R + K P S
Sbjct: 567 AARIRKLMRDRGIRKKPGCS 586
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 15/254 (5%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E N F + I+ Y+K A +FD+ P+ L S+N +I + G A+ +F
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+++ G D T V +AC + L Q+H F S S + NSL+ Y K
Sbjct: 131 MREMGLVMDGFTFSGVITAC--CNHVGLIRQLHSLAFS--SGFDSYVSVKNSLLTYYSKN 186
Query: 273 GRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
G ++ A VF + + + SW SMIV Y + +AL + M G + T
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 331 VLS--ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGL-LEEARAMVEG 386
VL+ +CV + G F K + + H G ++D+ + G + E+R + E
Sbjct: 247 VLTTFSCVE--DLSGGLQFHA--KAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEE 302
Query: 387 MPMKANVVIWGCLM 400
+ +++V+W ++
Sbjct: 303 I-CGSDLVVWNTMI 315
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ + N+LI Y K + +A+ +F +I QP++ S+ ++I YA G AL F
Sbjct: 70 HEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFG 129
Query: 315 YMRESGIRPNHVTFVGVLSACV-HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
MRE G+ + TF GV++AC H G +++ + + + ++ +
Sbjct: 130 EMREMGLVMDGFTFSGVITACCNHVGLIRQ----LHSLAFSSGFDSYVSVKNSLLTYYSK 185
Query: 374 AGLLEEARAMVEGMPMKA-NVVIWGCLMGACEKFGNVKMG 412
G+LEEA + GM + + V W ++ A +G K G
Sbjct: 186 NGILEEAEMVFNGMGEEVRDEVSWNSMIVA---YGQHKRG 222
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 6/194 (3%)
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
+ +C + DL +H +KS S T + N I +Y KC + A+ F + +
Sbjct: 14 ILKSCIANKDLLTGKSLH--TIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHE 71
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
PNV S+ ++I YA L + A H++ + +P+ V+F +++A G
Sbjct: 72 PNVFSFNALIAAYAKESLIHVA----HHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
F M+ + + F G + GL+ + ++ + V + L+ K G
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNG 187
Query: 408 NVKMGEWVAKHLQE 421
++ E V + E
Sbjct: 188 ILEEAEMVFNGMGE 201
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 215/379 (56%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+ ++++ M D TL V A +L +G+ + A
Sbjct: 240 WNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAE 299
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+ + + + +Y+K G+ +KAR++FD R + +W+A+I+G +Q R +EA+
Sbjct: 300 EKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALA 359
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLID 267
+F ++ P+DVTMVSV SAC LG LE VH Y+ + K T++L +L+D
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYI---RRKDLPLTVILGTALVD 416
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG + A K F + N +WT++I G A+NG + EAL+ F M E+ I P VT
Sbjct: 417 FYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVT 476
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVL AC HG V+EG+ F M Y I PR HYGCMVDLLGRAGL++EA + M
Sbjct: 477 FIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNM 536
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ N V+W L+ AC NV++GE K + L+P G Y++LSN YAS G W+
Sbjct: 537 PIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAA 596
Query: 448 RIRAVMKHRNLAKIPAYSL 466
+R MK + + KIP SL
Sbjct: 597 MVRKEMKEKGVEKIPGCSL 615
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 173/324 (53%), Gaps = 11/324 (3%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEI 139
H +A +N +IR + R P+ AL +++ M V PD +T+ +K+ ++ L +
Sbjct: 130 HPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSV 189
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
GR + + A + G ++F + I +Y+ GD A +F + + +WNA+IAG +
Sbjct: 190 GRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+G KE ++MF G+ + D+VT++SV +ACG LGD L + +Y + K +S
Sbjct: 250 NGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYA-EEKGMLRSRN 308
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L +L+DMY KCG +D A ++F + +V +W++MI GY + EAL F+ M+ +
Sbjct: 309 LA-TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGT 367
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGL 376
+ PN VT V VLSAC G ++ GK H + K++ P G +VD + G
Sbjct: 368 EVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDL----PLTVILGTALVDFYAKCGC 423
Query: 377 LEEARAMVEGMPMKANVVIWGCLM 400
+++A E MP++ N W L+
Sbjct: 424 IKDAVKAFESMPVR-NTWTWTALI 446
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 190/303 (62%), Gaps = 2/303 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS + G A +VFD P SW A+I G ++GR EAID F + G EPD
Sbjct: 88 ISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDY 147
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+++V SAC +G L L + VH+ V V+ + + + NSLIDMY +CG+++LA +VF
Sbjct: 148 VTLIAVISACAEVGALGLGMWVHRLV--VRQGLERNVRIANSLIDMYARCGQVELARQVF 205
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + V SW SMIVG+AANG +A++ F MR G +P+ VTF GVL+AC HGG
Sbjct: 206 SGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTD 265
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG ++++M+ Y I R HYGC+VDLLGR+G LEEA +V MPM+ N V+ G L+
Sbjct: 266 EGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAG 325
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C G+V M E + +HL EL+P D YV+LSNIYA+ G W+ ++R++MK R L K P
Sbjct: 326 CRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRP 385
Query: 463 AYS 465
YS
Sbjct: 386 GYS 388
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +A+D + M GV PD TL V+ A ++ AL +G +H L V
Sbjct: 115 WTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVV 174
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE N + I +Y++ G E AR+VF +R + SWN++I G + +GR +A++
Sbjct: 175 RQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVE 234
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF+PD VT V +AC G + L+ + + + + + ++D+
Sbjct: 235 HFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYD-LMRAEYGIAARMEHYGCVVDL 293
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNH 325
G+ G+++ A +V + +PN +++ G +G A ++ E G N+
Sbjct: 294 LGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANY 353
Query: 326 VTFVGVLSA 334
V + +A
Sbjct: 354 VLLSNIYAA 362
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 220 PDDVTMVSVTSACG----SLGDLELALQVHKYV----------------FQVKSKQKSDT 259
P+DVT+++V SAC S LAL VH V F S+
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLA 69
Query: 260 LML------------NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
L L N++I + G + A++VF + P+ SWT++I G NG +
Sbjct: 70 LQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHD 129
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGC 366
EA+DCF M G+ P++VT + V+SAC G + G + ++ + R A+
Sbjct: 130 EAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN--S 187
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ R G +E AR + GM K VV W ++
Sbjct: 188 LIDMYARCGQVELARQVFSGM-RKRTVVSWNSMI 220
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 240/450 (53%), Gaps = 37/450 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 111
K+ L+ CT+ + +YA + + + F WN IIR Y+ + P+ A Y
Sbjct: 21 KLATKFLTLCTSPHVGDLLYAQRVFNGI--TSPNTFMWNAIIRAYSNSDEPELAFLSYQQ 78
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M + V + YT P +L+A L A+ Q+H L ++LG S+ F + + +Y+ G+
Sbjct: 79 MLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGE 138
Query: 172 FEKARKVFDENPERKLGSWN-------------------------------AIIAGLSQD 200
AR++FD PER SWN ++I+GL +
Sbjct: 139 IHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEA 198
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G++ EA+ + ++ GFE D V + S+ +AC +LG L+ +H YV + + D +
Sbjct: 199 GQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYV--LNNGVDVDRV 256
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ +L++MY KCG M+ A VF ++ +Q +V WT+MI G+A +G EAL+ F+ MR
Sbjct: 257 IGCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRR 316
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
GIRPN +TF VL AC +GG V+EGK F+ MK Y + P HYGCMVDLLGR+G L+
Sbjct: 317 EGIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLD 376
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA+ +++ MPMK + VIWG L+ AC + +G V HL E++ G Y+ L+ I A
Sbjct: 377 EAKELIKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILA 436
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+ G W+E +R MK + P S T
Sbjct: 437 AEGKWKEAAEVRLKMKSLGVPISPGKSSVT 466
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 138/319 (43%), Gaps = 44/319 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSK--AGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+ + ++ + + + F++L + GD A++VF+ WNAII S
Sbjct: 5 KQIQAQMIKTAIITEPKLATKFLTLCTSPHVGDLLYAQRVFNGITSPNTFMWNAIIRAYS 64
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ A + + + T + AC +L + ALQVH V +K SD
Sbjct: 65 NSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLV--IKLGFGSD 122
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVF----------WEI-------------------DQP- 288
LN+L+ +Y CG + A ++F W I D P
Sbjct: 123 VFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPL 182
Query: 289 -NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK-- 345
NV SWTS+I G G + EAL + M+ +G + V +L+AC + G + +G+
Sbjct: 183 KNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWL 242
Query: 346 HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLLEEARAMVEGMP-MKANVVIWGCLMGAC 403
HF+ ++ N ++ GC +V++ + G +EEA ++ + + +V IW ++
Sbjct: 243 HFY-VLNNGVDVDRVI---GCALVNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGF 298
Query: 404 EKFG-NVKMGEWVAKHLQE 421
G V+ EW + +E
Sbjct: 299 AIHGRGVEALEWFNRMRRE 317
>gi|413943701|gb|AFW76350.1| hypothetical protein ZEAMMB73_198527 [Zea mays]
Length = 515
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 215/384 (55%), Gaps = 3/384 (0%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ + W +I Y +A+ + +G+ PD +T VL A ++ LE G
Sbjct: 3 HPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGEA 62
Query: 143 LHSLAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+ + A + G+ + F + + LY K G+ EKAR VFDE R +W A++ G + +G
Sbjct: 63 VWAAARQEEGVAESVFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYASNG 122
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+D+F ++ G +PD T+V SAC LG L+L Q V + + ++
Sbjct: 123 HPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHW--DEVLGNPVL 180
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+LIDMY KCG A+ VF ++ + ++ W +MI+G G A M++SG+
Sbjct: 181 GTALIDMYAKCGSTSEAWMVFQQMLERDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGV 240
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+ N TF+G+L +C H G V +G+ +F M +VY+I PR HYGCMVDL RAGLLEEA
Sbjct: 241 KLNDNTFIGLLCSCTHTGLVNDGRQYFHNMTHVYRISPRIEHYGCMVDLFSRAGLLEEAH 300
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
++ MPM AN V+WG L+G C+ N + E K L LEPW+ G YV+LSNIY++ G
Sbjct: 301 QLIGDMPMLANAVVWGALLGGCKIHRNADLAEHALKQLIRLEPWNSGNYVMLSNIYSNSG 360
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
WE+ ++R MK + + K+PA S
Sbjct: 361 RWEDAAKLRLEMKAKGIEKVPASS 384
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 108/224 (48%), Gaps = 15/224 (6%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P SW A+IA G A EAI + G PD T V V +AC + DLE
Sbjct: 2 PHPSTVSWTALIAAYMDAGHALEAIGVARRAFASGMRPDSFTAVRVLTACARVADLETGE 61
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
V Q + +S + + +D+Y KCG M+ A VF E+ + +W +M+ GYA+
Sbjct: 62 AVWAAARQEEGVAES-VFVATAALDLYVKCGEMEKARSVFDEMKNRDAVAWGAMVGGYAS 120
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK------HFFEMMKNVYQ 356
NG EALD F M+ G +P+ T VG LSAC G + G+ H+ E++ N
Sbjct: 121 NGHPREALDLFFAMQMEGAKPDCYTVVGALSACTRLGALDLGRQAVGMVHWDEVLGN--- 177
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
P ++D+ + G EA + + M ++ ++++W ++
Sbjct: 178 --PVLG--TALIDMYAKCGSTSEAWMVFQQM-LERDIIVWNAMI 216
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 215/363 (59%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
AL+I+ ++ + + + TL VL A L AL +G++LH ++ G + + S
Sbjct: 333 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 392
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + A + F ++ WN++I SQ+G+ +EAID+F + G + D
Sbjct: 393 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 452
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
V++ + SAC +L L ++H F ++ +SD ++LIDMY KCG +DLA +VF
Sbjct: 453 VSISAALSACANLPALHYGKEIH--AFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 510
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+++ N SW S+I Y +G ++L+ FH M GI+P+HVTF+ ++SAC H G+V
Sbjct: 511 DTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVD 570
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG H+F M I R HY CMVDL GRAG L EA M+ MP + +WG L+GA
Sbjct: 571 EGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGA 630
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++ E +++L +L+P + G YV+LSN++A+ G WE V +IR++MK R + K+P
Sbjct: 631 CRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVP 690
Query: 463 AYS 465
S
Sbjct: 691 GCS 693
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 193/422 (45%), Gaps = 32/422 (7%)
Query: 11 SSLRMKSSHPLLHRLCKTHTFRKHVTISAAS---SFLDTHEDPAKIVATQLSKCTNLLQL 67
++ ++KS H + K F H S A S L T DP+ + +Q + + +
Sbjct: 17 TTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGL--SQGRQAHAQMLV 74
Query: 68 NQI-YAHIIRTHMLHSY--SAAF----------------HWNNIIRLYTRLEAPKKALDI 108
N I Y I+ T +L Y AF WN +IR +T + AL
Sbjct: 75 NGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLF 134
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
Y M G LPD YT P V+KA L ++ +GR +H +G E + F S I YS+
Sbjct: 135 YFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSE 194
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
G AR +FD P + WN ++ G ++G A +F+ +++ P+ VT V
Sbjct: 195 NGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACV 254
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS--LIDMYGKCGRMDLAYKVFWEID 286
S C S + Q+H V V S + D+ + N+ LID+Y KC +++A K+F +
Sbjct: 255 LSVCASEIMINFGSQLHGLV--VSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRT 312
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
++ T+MI GY NG+ N AL+ F ++ + +R N VT VL AC + GK
Sbjct: 313 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 372
Query: 347 FF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
++KN + ++D+ + G L+ A G+ K + V W ++ +C +
Sbjct: 373 LHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWNSMITSCSQ 429
Query: 406 FG 407
G
Sbjct: 430 NG 431
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 118/213 (55%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ P++A+D++ M AG DC ++ L A L AL G+++H+ +
Sbjct: 420 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 479
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R S+ F ES I +YSK G+ + A +VFD E+ SWN+IIA GR K++++
Sbjct: 480 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLN 539
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ---VKSKQKSDTLMLNSL 265
+F G+ G +PD VT +++ SACG G ++ + + + + + ++ + M
Sbjct: 540 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACM---- 595
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D++G+ GR++ A+ + + P+ W +++
Sbjct: 596 VDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL 628
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+VS+ C L Q H + + + + ++ L+ MY CG A +F++
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQM--LVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQ 106
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ W MI G+ G + AL + M G P+ TF V+ AC V G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ + ++ E ++ G + +AR + + MP K + V+W ++
Sbjct: 167 RVVHDKIQ-FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLN--- 221
Query: 405 KFGNVKMGEW 414
G VK G+W
Sbjct: 222 --GYVKNGDW 229
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 271 bits (692), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 147/378 (38%), Positives = 211/378 (55%), Gaps = 8/378 (2%)
Query: 89 WNNIIRLYTRLEAPKK-ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ + K+ AL + M R GV P+ YT VL A L LH+
Sbjct: 149 WTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLA---ALHAST 205
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V++GL+S+ F S I Y K GD + R+VFDE R L WN+IIAG +Q G AI
Sbjct: 206 VKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAI 265
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F+ +K GF + T+ SV AC + LE QVH +V K + D ++ N+L+D
Sbjct: 266 ELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAHVL----KYERDLILHNALLD 321
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG ++ A +F + Q +V SW++MI G A NG + EAL F M+ G+ PN +T
Sbjct: 322 MYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRIT 381
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VGVL AC H G V++G ++F MK ++ I+P H+ CMVDLLGRAG L+EA + M
Sbjct: 382 MVGVLFACSHAGLVEDGWYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDM 441
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
++ + VIW L+GAC + + + A+ + +LEP GA V+LSN YA W + E
Sbjct: 442 NLEPDAVIWRTLLGACRMHKSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAE 501
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ M+ R + K P S
Sbjct: 502 KSWKAMRDRGMKKEPGRS 519
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 131/253 (51%), Gaps = 10/253 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ-DGRAKEAIDMFIGLKK 215
F + +S+Y+K G + A ++FD PER + +W ++A L+ DGR +EA+ + + +
Sbjct: 116 FVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWR 175
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G P+ T SV ACG+ G L AL + VK SD + +SLID Y K G +
Sbjct: 176 DGVAPNAYTFSSVLGACGTPGVLA-AL----HASTVKVGLDSDVFVRSSLIDAYMKLGDL 230
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
D +VF E+ ++ W S+I G+A +G A++ F M+++G N T VL AC
Sbjct: 231 DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRAC 290
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
++ G+ ++ +V + E + ++D+ + G LE+A A+ MP + +V+
Sbjct: 291 TGMVMLEAGR---QVHAHVLKYERDLILHNALLDMYCKCGSLEDAEALFHRMPQR-DVIS 346
Query: 396 WGCLMGACEKFGN 408
W ++ + G
Sbjct: 347 WSTMISGLAQNGK 359
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 240/456 (52%), Gaps = 23/456 (5%)
Query: 11 SSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQI 70
+++RM + +H ++ +H+ + ++ LD + +KC +L Q+
Sbjct: 209 ANMRMGKA---MHAYVIRNSNNEHMGVPTTTALLDMY-----------AKCGHLGLARQL 254
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
+ + + W +I R ++ ++I M + P+ T+ ++
Sbjct: 255 FNGLTQ-------KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVE 307
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
AL++G+QLH+ +R G + + + +Y K D AR +FD R + W
Sbjct: 308 CGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIW 367
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
A+++ +Q +A ++F ++ G P VT+VS+ S C G L+L VH Y+
Sbjct: 368 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYI-- 425
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
K + + D ++ +L+DMY KCG ++ A ++F E ++ W ++I G+A +G EAL
Sbjct: 426 DKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 485
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
D F M G++PN +TF+G+L AC H G V EGK FE M + + + P+ HYGCMVDL
Sbjct: 486 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDL 545
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
LGRAGLL+EA M++ MP+K N ++WG L+ AC N ++GE A L E+EP + G
Sbjct: 546 LGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYN 605
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V++SNIYA+ W + +R MK + K P +S+
Sbjct: 606 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSV 641
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 142/282 (50%), Gaps = 4/282 (1%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
+ P VLKA Q+ ++G+++H ++ GL+ + F + + +Y + E AR VFD+
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
ER + SW+ +I LS++ A+++ + P +V MVS+ + ++ +
Sbjct: 155 MMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMG 214
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H YV + + + +L+DMY KCG + LA ++F + Q V SWT+MI G
Sbjct: 215 KAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPR 360
+ E F M+E I PN +T + ++ C G +Q GK +++N + +
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
A +VD+ G+ + ARA+ + + +V+IW ++ A
Sbjct: 335 LA--TALVDMYGKCSDIRNARALFDSTQNR-DVMIWTAMLSA 373
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 225/414 (54%), Gaps = 38/414 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +AL +++ M + G +PD TL V+ A L A GRQ+H+ V
Sbjct: 216 WNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMV 275
Query: 149 ---------------------------------RLGLESNEFCESGFISLYSKAGDFEKA 175
R+ + S E+ I+ Y+K+ + A
Sbjct: 276 KSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS-VVSETSMITGYAKSANVGDA 334
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+ VF + E+ + +WN +IA + + +EA+ +F+ LK+ P T +V +AC +L
Sbjct: 335 QAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANL 394
Query: 236 GDLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
+L+L Q H +V F+ S +SD + NSL+DMY K G + KVF + +
Sbjct: 395 ANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNV 454
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW +MIVGYA NG A +AL F M S RP+ VT +GVLSAC H G V+EG+ +F+ M
Sbjct: 455 SWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSM 514
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ I P HY CM+DLLGRAG L+E ++E MPM+ + V+W L+GAC N+ M
Sbjct: 515 TEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDM 574
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GEW A L EL+P + G YV+LSN+YA G W +V R+R MKHR ++K P S
Sbjct: 575 GEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVFRVRRSMKHRGVSKQPGCS 628
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 153/328 (46%), Gaps = 40/328 (12%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ Y+ L A A G Q+H+L + S+ + + + +Y+K E+A+KVF
Sbjct: 146 NAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVF 205
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D PER + SWN++I Q+G EA+ +F+ + K GF PD+VT+ SV SAC L
Sbjct: 206 DAMPERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGR 265
Query: 240 LALQVHKYVFQVKSKQ-KSDTLMLNSLIDMYGKCGR------------------------ 274
QVH + VKS + + D ++ N+L+DMY KCGR
Sbjct: 266 EGRQVHTRM--VKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMIT 323
Query: 275 -------MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+ A VF ++ + NV +W +I YA N EAL F ++ + P H T
Sbjct: 324 GYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYT 383
Query: 328 FVGVLSACVHGGKVQEGKH-FFEMMKNVYQIE--PRFAHY--GCMVDLLGRAGLLEEARA 382
+ VL+AC + +Q G+ ++K ++ + P + +VD+ + G + +
Sbjct: 384 YGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAK 443
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ E M + NV W ++ + G K
Sbjct: 444 VFERMAARDNVS-WNAMIVGYAQNGRAK 470
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 155/340 (45%), Gaps = 12/340 (3%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKV 178
+ + L +L A +L +L R++ G+ N F + +S ++ G + A +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFD-----GMPHRNTFSYNALLSACARLGRADDALAL 103
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F P+ S+NA++A L+Q GR +A+ + F + + S SAC S
Sbjct: 104 FGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
QVH V KS SD + +L+DMY KC R + A KVF + + N+ SW S+I
Sbjct: 164 RTGEQVHALV--TKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLIT 221
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
Y NG +EAL F M + G P+ VT V+SAC +EG+ M +
Sbjct: 222 CYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
+VD+ + G EA+ + + M +++ VV ++ K NV G+ A
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRS-VVSETSMITGYAKSANV--GDAQAVF 338
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
LQ +E + A+ VL YA EE R+ +K ++
Sbjct: 339 LQMVEK-NVVAWNVLIATYAHNSEEEEALRLFVRLKRESV 377
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 270 bits (691), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 200/304 (65%), Gaps = 1/304 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ Y+K G+ E ARK+FDE P+R + +WNA+IAG G ++A++MF ++ G PD+
Sbjct: 182 ITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDE 241
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VTM+S+ SAC LGDL+ ++H + ++ + S L+ N+LIDMY KCG + A +VF
Sbjct: 242 VTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLS-VLLGNALIDMYAKCGSIVRALEVF 300
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + +VS+W S++ G A +G A +++ F MR+ IRP+ +TFVGVL AC H G+V+
Sbjct: 301 QGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVE 360
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG+ +F++M++ Y IEP HYGCMVDLLGRAGLL EA ++ M ++ N ++W L+GA
Sbjct: 361 EGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGA 420
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++G L ++ G YV+LSNIYASRG W+ VE++R +M + K
Sbjct: 421 CRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEA 480
Query: 463 AYSL 466
SL
Sbjct: 481 GCSL 484
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 44/332 (13%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YAH + H+ + F WN +IR + +P A+ +Y M V PD +T P VLKA
Sbjct: 30 YAHQLFPHI--TEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKA 87
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+L +++G +H RLG ESN F + I ++ GD AR +FD + +R + +W
Sbjct: 88 CTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAW 147
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+A+ AG ++ G A +F D++ +
Sbjct: 148 SALTAGYARRGELGVARQLF----------DEMPV------------------------- 172
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
D + N +I Y K G M+ A K+F E+ + +V +W +MI GY G +AL
Sbjct: 173 ------KDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQAL 226
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F MR G P+ VT + +LSAC G + G+ + + + ++D+
Sbjct: 227 EMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDM 286
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G + A + +GM K +V W ++G
Sbjct: 287 YAKCGSIVRALEVFQGMREK-DVSTWNSVLGG 317
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 117/259 (45%), Gaps = 36/259 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++AL+++ M G LPD T+ +L A L L+ G+++H
Sbjct: 209 WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCIS 268
Query: 149 RLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+G + + I +Y+K G +A +VF E+ + +WN+++ GL+ G A+++I
Sbjct: 269 EMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSI 328
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++K PD++T V V AC G +E + +Q D
Sbjct: 329 HLFTEMRKLKIRPDEITFVGVLVACSHAGRVE------------EGRQYFDL-------- 368
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M Y + +PN+ + M+ GL NEA D M+ I PN +
Sbjct: 369 -------MRDEYNI-----EPNIRHYGCMVDLLGRAGLLNEAFDFIDTMK---IEPNAIV 413
Query: 328 FVGVLSACVHGGKVQEGKH 346
+ +L AC G V+ G+
Sbjct: 414 WRTLLGACRIHGNVELGRR 432
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 12/263 (4%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ S + +G A ++F E WN +I G +Q AI ++ ++ PD
Sbjct: 18 YASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPD 77
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
T V AC L +++ VH VF++ +S+T + N+LI + CG + +A +
Sbjct: 78 KFTFPFVLKACTRLCWVKMGFGVHGRVFRLGF--ESNTFVRNTLIYFHANCGDLAVARAL 135
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + +V +W+++ GYA G A F M + V++ +++ G++
Sbjct: 136 FDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDL----VSWNVMITGYAKRGEM 191
Query: 342 QEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ + F+ + ++V A Y + EE R++ E +P + ++ L
Sbjct: 192 ESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGE-LPDEVTML---SL 247
Query: 400 MGACEKFGNVKMGEWVAKHLQEL 422
+ AC G++ G+ + + E+
Sbjct: 248 LSACTDLGDLDAGQRIHCCISEM 270
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G M A+++F I +P+ W +MI G A + A+ + M +RP+ TF VL
Sbjct: 26 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 85
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQI--EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
AC V+ G F + V+++ E ++ G L ARA+ +G K
Sbjct: 86 KACTRLCWVKMG---FGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDG-SAK 141
Query: 391 ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD-GAYVVLSNIYASRGLWEEVERI 449
+VV W L + G + VA+ L + P D ++ V+ YA RG E ++
Sbjct: 142 RDVVAWSALTAGYARRGELG----VARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKL 197
Query: 450 RAVMKHRNL----AKIPAYSL 466
+ R++ A I Y L
Sbjct: 198 FDEVPKRDVVTWNAMIAGYVL 218
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 234/444 (52%), Gaps = 60/444 (13%)
Query: 55 ATQLSKCTNLLQLNQ---IYAHIIR----------THMLHSYSA---------------- 85
T L+ C N NQ I+AH+IR T ++H YS
Sbjct: 282 TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE 341
Query: 86 --AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
A+ WN++I Y + ++AL ++ M G+ PDC++L +L + L + GR+L
Sbjct: 342 RNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGREL 401
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN--PERKLGSWNAIIAGLSQDG 201
H+ VR +E + + +Y+K G + A KV+D+ +R WN+I+AG + G
Sbjct: 402 HNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKG 461
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
KE+ + F+ + + E D +TMV++ + L L+
Sbjct: 462 LKKESFNHFLEMLESDIEYDVLTMVTIVNL--------LVLET----------------- 496
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+L+DMY KCG + A VF ++ N+ SW +MI GY+ +G + EAL + M + G+
Sbjct: 497 --ALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGM 554
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN VTF+ +LSAC H G V+EG F M+ Y IE + HY CMVDLLGRAG LE+A+
Sbjct: 555 YPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAK 614
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
VE MP++ V WG L+GAC ++ MG A+ L EL+P + G YV++SNIYA+ G
Sbjct: 615 EFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAG 674
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W+EVE IR +MK + + K P S
Sbjct: 675 RWKEVEDIRQMMKMKGVKKDPGVS 698
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 177/350 (50%), Gaps = 12/350 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y R++ +A I+ M + GV PD +T L+ L + + G+Q+HS +
Sbjct: 143 WNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 202
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + F + I +Y+K D E KVFDE ER +WN+II+ +Q G +A+
Sbjct: 203 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 262
Query: 209 MFIGLKKC--GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F+ +++ G +PD T ++ + C + + Q+H ++ +++ + ++ L+
Sbjct: 263 LFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL--IRANITKNIIVETELV 320
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY +CGR++ A ++F + + N SW SMI GY NG EAL F M+ +GI+P+
Sbjct: 321 HMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCF 380
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMV 384
+ +LS+CV Q+G+ +++N + E +VD+ + G ++ A +
Sbjct: 381 SLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQ--VVLVDMYAKCGSMDYAWKVYD 438
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
+ + N +W ++ + N + + H E+ SD Y VL+
Sbjct: 439 QTIKKDRNTALWNSILAG---YANKGLKKESFNHFLEMLE-SDIEYDVLT 484
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 163/374 (43%), Gaps = 35/374 (9%)
Query: 67 LNQIYAHIIRTHML------HSYSAAF-HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
LN H R L S+SA F H I+L + P I A
Sbjct: 13 LNHFNCHYSRHFFLLPNPNSKSFSAHFGHTTTTIKL--KFNGPDSPKPTSIHTKPAS--- 67
Query: 120 DCYTLPI--VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG---DFEK 174
D LP +++ + + G+ +H+ + G + + + + LY+++G D
Sbjct: 68 DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCY 127
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARK+F+E PER L +WN +I ++ EA +F + K G PD+ T S CG+
Sbjct: 128 ARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGA 187
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L + QVH + + K DT + N+LIDMY KC + KVF E+ + N +W
Sbjct: 188 LRSRDGGKQVHSKL--IACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWN 245
Query: 295 SMIVGYAANGLANEALDCFHYMRES--GIRPNHVTFVGVLSACVHGGKVQEGKHFF---- 348
S+I A G N+AL F M+ES GI+P+ TF +L+ C + +G+
Sbjct: 246 SIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLI 305
Query: 349 --EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+ KN+ +E H + G L A+ + M + N W ++ ++
Sbjct: 306 RANITKNII-VETELVH------MYSECGRLNYAKEIFNRMAER-NAYSWNSMIEGYQQN 357
Query: 407 GNVKMGEWVAKHLQ 420
G + + K +Q
Sbjct: 358 GETQEALRLFKQMQ 371
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 237/439 (53%), Gaps = 11/439 (2%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVA--TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
H R + A S L +H +P + + + +KC L + +++ + + +
Sbjct: 564 HPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEM-------PHPST 616
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W +I Y ++A+ + G+ PD +T VL A ++ L G +
Sbjct: 617 VPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRA 676
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A + G+ + F + + LY K G+ KAR+VFD+ + +W A++ G + +G +EA
Sbjct: 677 AEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREA 736
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+D+F+ ++ G +PD + SAC LG L+L Q + V + + ++ +LI
Sbjct: 737 LDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDW--DEFLDNPVLGTALI 794
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG A+ VF ++ + ++ W +MI+G G A M +SG++ N
Sbjct: 795 DMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDN 854
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+G+L +C H G +Q+G+ +F M +Y I PR HYGCMVDLL RAGLL+EA +V+
Sbjct: 855 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 914
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MPM AN VI G L+G C+ N ++ E V K L LEPW+ G YV+LSNIY++RG WE+
Sbjct: 915 MPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDA 974
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R MK + + K+PA S
Sbjct: 975 AKLRLDMKAKGVEKVPACS 993
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 247/475 (52%), Gaps = 28/475 (5%)
Query: 7 GISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL-----SKC 61
G+ L LR S P L T F I +AS D A++ A L S
Sbjct: 57 GLHLHVLRFHSHLPNPSHL--TFPF----AIKSASRLPDPLTAGAQLHARSLKLPSHSNP 110
Query: 62 TNLLQLNQIYAHIIRTHMLHSYSAAFH----------WNNIIRLYTRLEAPKKALDIYIF 111
L L +YA R LH AF W +I Y +A+ +
Sbjct: 111 HVLTSLLNLYA---RCGRLHDAQKAFDEMRQPPSTVSWTALITAYMDAGRGLEAIGVARS 167
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
+GV PD +T VL A ++ L G ++ + A + G+ N F + + LY K G+
Sbjct: 168 AFASGVRPDSFTAVRVLTACARVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGE 227
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+KAR VFD+ + + +W A++ G + +G +EA+++F ++ G PD T+ SA
Sbjct: 228 MDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYTVAGALSA 287
Query: 232 CGSLGDLELALQVHKYVFQVKSKQK-SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C LG L+L +V V ++ + + ++ +LIDMY KCG A+ VF ++ ++
Sbjct: 288 CTRLGALDLGRRV---VGMLQWDEVLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDI 344
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W +MI+G G A M++SG+ N TF+G+L +C H G V++G+ +F
Sbjct: 345 IVWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSCTHTGLVKDGRRYFRN 404
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M +Y I PR HYG MVDLL RAGLL+EA +++ MPM+AN V+WG L+G C+ N
Sbjct: 405 MTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVVWGALLGGCKIHRNAD 464
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ E V K L +LEPW+ G YVVLSNIY++ G WE+ ++R MK + + K+PA S
Sbjct: 465 LAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKAKGVEKVPASS 519
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 213/366 (58%), Gaps = 6/366 (1%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ +Y M +LPD Y + +LKA AL GR++HS A++LG SN +
Sbjct: 120 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIM 179
Query: 164 SLYSKAGDFEKARKVFDENPERKLGS----WNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
LY K G+ AR+VF+E PE + W A+I G ++ A++ F G++
Sbjct: 180 ELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVR 239
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P++ T+V V SAC LG LE+ VH Y+ K + + + + N+LI+MY +CG +D A
Sbjct: 240 PNEFTIVCVLSACSQLGALEIGRWVHSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQ 297
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF E+ +V ++ +MI G + NG + +A++ F M +RP +VTFVGVL+AC HGG
Sbjct: 298 TVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGG 357
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V G F M Y++EP+ HYGCMVDLLGR G LEEA ++ M M + ++ G L
Sbjct: 358 LVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTL 417
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC+ N+++GE VAK L++ G YV+LS++YAS G W+E ++RA MK +
Sbjct: 418 LSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 477
Query: 460 KIPAYS 465
K P S
Sbjct: 478 KEPGCS 483
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 109/195 (55%), Gaps = 3/195 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R E +AL+ + M V P+ +T+ VL A QL ALEIGR +HS
Sbjct: 210 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 269
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N F + I++YS+ G ++A+ VFDE +R + ++N +I+GLS +G++++AI+
Sbjct: 270 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 329
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV-HKYVFQVKSKQKSDTLMLNSLID 267
+F + P +VT V V +AC G ++ ++ H + + + + ++D
Sbjct: 330 LFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEH--YGCMVD 387
Query: 268 MYGKCGRMDLAYKVF 282
+ G+ GR++ AY +
Sbjct: 388 LLGRVGRLEEAYDLI 402
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ +R G + F + SK + A ++F + + A+I G G
Sbjct: 58 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 117
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EAI ++ + PD+ M S+ ACGS L +VH ++ S+ L+
Sbjct: 118 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGF--SSNRLVR 175
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSS----WTSMIVGYAANGLANEALDCFHYMRE 318
++++YGKCG + A +VF E+ + V+ WT+MI G+ N N AL+ F M+
Sbjct: 176 LRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQG 235
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+RPN T V VLSAC G ++ G+ M+ ++IE ++++ R G ++
Sbjct: 236 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSID 294
Query: 379 EARAMVEGMPMKANVVIWGCLMGA 402
EA+ + + M + +V+ + ++
Sbjct: 295 EAQTVFDEMKDR-DVITYNTMISG 317
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 193/304 (63%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I Y K+GD +AR++FD P R + SW +I +Q + +EAI++F ++ G EPD
Sbjct: 144 MIDGYVKSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPD 203
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V ++SV SACG LG ++L VH++V + Q + ++N++IDMY KCG + A +V
Sbjct: 204 GVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQ--EIPLMNAIIDMYVKCGSVKKALEV 261
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++Q ++ +WT+MI G+A +GL +EA++ F M + + PN +TF+ VLS C H G
Sbjct: 262 FEGMEQKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLT 321
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ +F+ M + Y+I+PR HYGCM+DLLGRAG L EAR +++ MP KAN IWG L+
Sbjct: 322 DLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLA 381
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A G+ ++GE HL ELEP + G Y++LSNIYA + W+ V +R M+ R L +
Sbjct: 382 AARTHGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNV 441
Query: 462 PAYS 465
P S
Sbjct: 442 PGAS 445
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y +++ P++A++++ M G+ PD L VL A L +++G +H +
Sbjct: 172 WTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVL 231
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + I +Y K G +KA +VF+ ++ + +W +IAG + G EA++
Sbjct: 232 RRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGSEAVE 291
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK-YVFQVKSKQKSDTLMLNSLID 267
+F ++K P+D+T ++V S C +G +L K V Q K K + + +ID
Sbjct: 292 LFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEH--YGCMID 349
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ G+ G + A + ++ + N + W +++ +G
Sbjct: 350 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 387
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 224/408 (54%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-------------- 134
WN++I Y++ K L ++ M GV D T+ V+ A +L
Sbjct: 156 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 215
Query: 135 -FALEIGRQLHSLAV-----RLGLESNE-----------FCESGFISLYSKAGDFEKARK 177
+ +E+ L + V R L+S E + I+ Y+K D ARK
Sbjct: 216 DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARK 275
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ P++ L SW+++I+G SQ +A+++F +++ +PD + + SV S+C LG
Sbjct: 276 IFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGA 335
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L VH+YV ++ K+DT+M NSLIDMY KCG A +VF E+ + + SW S+I
Sbjct: 336 LDLGKWVHEYV--RRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSII 393
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NG E+L+ F M G RPN VTF+GVL AC + V+EG FE MK +Y +
Sbjct: 394 IGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSL 453
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP+ HYGC+VDLLGRAG LE+A + MP+ + V+W L+G+C G+V + E V K
Sbjct: 454 EPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTK 513
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L ELEP + G Y +LSN YAS W E +R M ++ K P S
Sbjct: 514 KLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCS 561
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 36/375 (9%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
+LQ + ++AH + + F WN +IR + +AP A+ Y G++PD T
Sbjct: 32 ILQPDLVFAHKVFDQI--EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLT 89
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP 183
P +LKA ++ AL G Q+H+ +LGL S+ F + I LY+ G+ AR VFDE
Sbjct: 90 FPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV 149
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ + SWN++I G SQ R K+ + +F ++ G + D VTM+ V SAC LGD +A
Sbjct: 150 VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADY 209
Query: 244 VHKYV----------------------FQVKSKQK-------SDTLMLNSLIDMYGKCGR 274
+ +Y+ Q++S +K + + +N++I Y K
Sbjct: 210 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQD 269
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A K+F +I + ++ SW+SMI GY+ ++AL+ F M+ + ++P+ + V+S+
Sbjct: 270 IVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSS 329
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA----RAMVEGMPMK 390
C H G + GK E ++ I+ ++D+ + G +EA + M E +
Sbjct: 330 CAHLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLS 388
Query: 391 ANVVIWGCLMGACEK 405
N +I G EK
Sbjct: 389 WNSIIIGLANNGFEK 403
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 215/363 (59%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
AL+I+ ++ + + + TL VL A L AL +G++LH ++ G + + S
Sbjct: 432 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 491
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + A + F ++ WN++I SQ+G+ +EAID+F + G + D
Sbjct: 492 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
V++ + SAC +L L ++H F ++ +SD ++LIDMY KCG +DLA +VF
Sbjct: 552 VSISAALSACANLPALHYGKEIH--AFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVF 609
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+++ N SW S+I Y +G ++L+ FH M GI+P+HVTF+ ++SAC H G+V
Sbjct: 610 DTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVD 669
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG H+F M I R HY CMVDL GRAG L EA M+ MP + +WG L+GA
Sbjct: 670 EGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGA 729
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++ E +++L +L+P + G YV+LSN++A+ G WE V +IR++MK R + K+P
Sbjct: 730 CRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVP 789
Query: 463 AYS 465
S
Sbjct: 790 GCS 792
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 166/357 (46%), Gaps = 26/357 (7%)
Query: 11 SSLRMKSSHPLLHRLCKTHTFRKHVTISAAS---SFLDTHEDPAKIVATQLSKCTNLLQL 67
++ ++KS H + K F H S A S L T DP+ + +Q + + +
Sbjct: 17 TTFKLKSFHTNSVNIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGL--SQGRQAHAQMLV 74
Query: 68 NQI-YAHIIRTHMLHSY--SAAF----------------HWNNIIRLYTRLEAPKKALDI 108
N I Y I+ T +L Y AF WN +IR +T + AL
Sbjct: 75 NGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLF 134
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
Y M G LPD YT P V+KA L ++ +GR +H +G E + F S I YS+
Sbjct: 135 YFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSE 194
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
G AR +FD P + WN ++ G ++G A +F+ +++ P+ VT V
Sbjct: 195 NGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACV 254
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
S C S + Q+H V V S + D+ + N+L+ MY KCG + A ++F + +
Sbjct: 255 LSVCASEIMINFGSQLHGLV--VSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKT 312
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
++ +W MI GY NG +EA FH M + ++P+ +TF L G +++GK
Sbjct: 313 DLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGK 369
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 151/320 (47%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + A +++ M R P+ T VL + G QLH L V
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLE + + +++Y+K G AR++FD P+ L +WN +I+G Q+G EA
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + +PD +T S L ++H Y+ +++ D + ++LID+
Sbjct: 336 LFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYI--IRNGVSLDVFLKSALIDI 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC +++A K+F + ++ T+MI GY NG+ N AL+ F ++ + +R N VT
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL AC + GK ++KN + ++D+ + G L+ A G+
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRLDLAHQTFIGI 511
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + V W ++ +C + G
Sbjct: 512 SDK-DAVCWNSMITSCSQNG 530
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 118/213 (55%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ P++A+D++ M AG DC ++ L A L AL G+++H+ +
Sbjct: 519 WNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 578
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R S+ F ES I +YSK G+ + A +VFD E+ SWN+IIA GR K++++
Sbjct: 579 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLN 638
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ---VKSKQKSDTLMLNSL 265
+F G+ G +PD VT +++ SACG G ++ + + + + + ++ + M
Sbjct: 639 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACM---- 694
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D++G+ GR++ A+ + + P+ W +++
Sbjct: 695 VDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLL 727
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+VS+ C L Q H + + + + ++ L+ MY CG A +F++
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQM--LVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQ 106
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ W MI G+ G + AL + M G P+ TF V+ AC V G
Sbjct: 107 LRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ + ++ E ++ G + +AR + + MP K + V+W ++
Sbjct: 167 RVVHDKIQ-FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLN--- 221
Query: 405 KFGNVKMGEW 414
G VK G+W
Sbjct: 222 --GYVKNGDW 229
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/303 (45%), Positives = 190/303 (62%), Gaps = 2/303 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS + G A +VFD P SW A+I G ++GR EAID F + G EPD
Sbjct: 177 ISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDY 236
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+++V SAC +G L L + VH+ V V+ + + + NSLIDMY +CG+++LA +VF
Sbjct: 237 VTLIAVISACAEVGALGLGMWVHRLV--VRQGLERNVRIANSLIDMYARCGQVELARQVF 294
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + V SW SMIVG+AANG +A++ F MR G +P+ VTF GVL+AC HGG
Sbjct: 295 SGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTD 354
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG ++++M+ Y I R HYGC+VDLLGR+G LEEA +V MPM+ N V+ G L+
Sbjct: 355 EGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLEEAMRVVTTMPMRPNEVVLGALLAG 414
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C G+V M E + +HL EL+P D YV+LSNIYA+ G W+ ++R++MK R L K P
Sbjct: 415 CRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRP 474
Query: 463 AYS 465
YS
Sbjct: 475 GYS 477
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +A+D + M GV PD TL V+ A ++ AL +G +H L V
Sbjct: 204 WTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVV 263
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE N + I +Y++ G E AR+VF +R + SWN++I G + +GR +A++
Sbjct: 264 RQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVE 323
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF+PD VT V +AC G + L+ + + + + + ++D+
Sbjct: 324 HFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYD-LMRAEYGIAARMEHYGCVVDL 382
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNH 325
G+ G+++ A +V + +PN +++ G +G A ++ E G N+
Sbjct: 383 LGRSGQLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANY 442
Query: 326 VTFVGVLSA 334
V + +A
Sbjct: 443 VLLSNIYAA 451
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 220 PDDVTMVSVTSACG----SLGDLELALQVHKYV----------------FQVKSKQKSDT 259
P+DVT+++V SAC S LAL VH V F S+
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLA 158
Query: 260 LML------------NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
L L N++I + G + A++VF + P+ SWT++I G NG +
Sbjct: 159 LQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHD 218
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGC 366
EA+DCF M G+ P++VT + V+SAC G + G + ++ + R A+
Sbjct: 219 EAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN--S 276
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ R G +E AR + GM K VV W ++
Sbjct: 277 LIDMYARCGQVELARQVFSGM-RKRTVVSWNSMI 309
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 233/439 (53%), Gaps = 37/439 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS---- 113
L +C N+ + Q++AH++ L A N ++ Y + +A A ++ ++
Sbjct: 10 LLRCRNVFHIRQVHAHVVANGTLQDLVIA---NKLLYTYAQHKAIDDAYSLFDGLTMRDS 66
Query: 114 ---------------------------RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
R GV PD YTLP V++ L+IGR +H +
Sbjct: 67 KTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDV 126
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ GL S+ F + + +Y+K E A+++F+ + L +W +I G D A E+
Sbjct: 127 VLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMI-GAYADCNAYES 185
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +++ G PD V MV+V +AC LG + A + Y+ V++ D ++ ++I
Sbjct: 186 LVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYI--VRNGFSLDVILGTAMI 243
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG ++ A +VF + + NV SW++MI Y +G +A+D FH M I PN V
Sbjct: 244 DMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRV 303
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +L AC H G ++EG FF M + + P HY CMVDLLGRAG L+EA ++E
Sbjct: 304 TFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEA 363
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M ++ + +W L+GAC +++ E A L EL+P + G YV+LSNIYA G WE+V
Sbjct: 364 MTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKV 423
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ R +M R L KIP ++
Sbjct: 424 AKFRDMMTQRKLKKIPGWT 442
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 224/379 (59%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +++ Y R+ + + M + G V+P+ TL +VL A L +GR + +
Sbjct: 197 WNAMMKAYGRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWS 256
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G+E++ S + +Y K G+ +AR+VFD ++ + +WNA+I G +Q+G + EAI
Sbjct: 257 KSAGMETDSLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAI 316
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +KK G PD +T+ V SAC ++G LEL ++ Y ++ + +L+D
Sbjct: 317 SLFHNMKKAGVCPDKITLAGVLSACSAVGALELGSELDGYASC--RGLYNNVYVGTALVD 374
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG +D A +VF ++ NV+SW ++I G A NG +EA+ F MR E G++P+ +
Sbjct: 375 MYAKCGDLDKAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDI 434
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V++GK +F + + +QI P+ HY CMVD L R+G LEE +E
Sbjct: 435 TFIGVLSACVHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEK 494
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++GE V + +LEP + YVV S IYAS G ++
Sbjct: 495 IPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDS 554
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M+ R + K P S
Sbjct: 555 AKMRGLMRERGVNKTPGCS 573
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 11/261 (4%)
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+L ++ L S++ I++YS D ARKVF+ P R + SWNA++ + G
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 204 KEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
E M + K G P+ VT+ V +AC GDL L V ++ + ++D+L+
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEW--SKSAGMETDSLVG 268
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
++L+ MY KCG + A +VF I +V +W +MI GYA NG++NEA+ FH M+++G+
Sbjct: 269 SALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVC 328
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEE 379
P+ +T GVLSAC G ++ G + + +Y + G +VD+ + G L++
Sbjct: 329 PDKITLAGVLSACSAVGALELGSELDGYASCRGLYN----NVYVGTALVDMYAKCGDLDK 384
Query: 380 ARAMVEGMPMKANVVIWGCLM 400
A + M K NV W L+
Sbjct: 385 AIEVFRKMRCK-NVASWNALI 404
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 221/377 (58%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I T+ A +A + I M + G P+ +TL +L A ++ ++++G+Q+H+ ++
Sbjct: 390 WNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSI 449
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L S+ F + I +Y+K G AR +FD + E+ S+N +I G SQ E++
Sbjct: 450 RRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRS-EKDGVSYNTLIVGYSQSQCCFESLH 508
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G E D V+ + SAC +L + ++H + VK S + NSL+D+
Sbjct: 509 LFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVL--VKRLLDSHPFLANSLLDV 566
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +D A K+F I Q +V+SW +MI+GY +G + A + F M++ GI +HV++
Sbjct: 567 YTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSY 626
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V GK +F M I+P+ HY CMVDLLGRAG L E+ ++ MP
Sbjct: 627 IAVLSVCSHGGLVDRGKKYFSQMI-AQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMP 685
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+AN +WG L+G+C G++++ A+HL EL+P + G Y +L N+Y+ G+W E
Sbjct: 686 FRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANG 745
Query: 449 IRAVMKHRNLAKIPAYS 465
++ +MK R + K PAYS
Sbjct: 746 VKKLMKSRKVQKNPAYS 762
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 170/313 (54%), Gaps = 7/313 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ I + + L+++ MS V P TL +L A L +G++LH ++
Sbjct: 289 WNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSI 348
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +ES+ F + + +Y+K G EKA +F+ R + SWNA+IA L+Q+G EA
Sbjct: 349 RRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFR 408
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ I ++K G P+ T+V++ AC + +++ Q+H + ++ SD + N+LID+
Sbjct: 409 LVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW--SIRRSLMSDLFVSNALIDV 466
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG+++LA +F ++ V S+ ++IVGY+ + E+L F MR +GI + V+F
Sbjct: 467 YAKCGQLNLARYIFDRSEKDGV-SYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSF 525
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+G LSAC + ++GK ++K + P A+ ++D+ + G+L+ A + +
Sbjct: 526 MGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLAN--SLLDVYTKGGMLDTASKIFNRI 583
Query: 388 PMKANVVIWGCLM 400
K +V W ++
Sbjct: 584 TQK-DVASWNTMI 595
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 170/342 (49%), Gaps = 12/342 (3%)
Query: 72 AHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS 131
AH+I H +AF WN++ R P +AL +Y M R+GV PD T P L A+
Sbjct: 66 AHLILRHHPFRLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAA 125
Query: 132 CQLFALE---IGRQLHSLAVRLGLE-SNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ E G +LH+ A+R GL ++ F + ++ Y+ G AR+VFDE P R +
Sbjct: 126 AAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDV 185
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN++++ L +G ++A +G+ + G + ++VS+ ACG+ D L VH
Sbjct: 186 VSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGL 245
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
V +K S + N+L+DMYGK G ++ + VF + + N SW S I +A G
Sbjct: 246 V--LKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHE 303
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYG 365
+ L+ F M E + P VT +L A V G GK H + + + V E
Sbjct: 304 DVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAV---ESDIFIAN 360
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G E+A A+ E + ++ NVV W ++ + G
Sbjct: 361 TLMDMYAKFGCSEKASAIFENIEVR-NVVSWNAMIANLTQNG 401
>gi|357142117|ref|XP_003572465.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Brachypodium distachyon]
Length = 613
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/303 (44%), Positives = 192/303 (63%), Gaps = 3/303 (0%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y+K G E ARKVFD PER + W ++I+G +Q G+ K+A+ +F ++ G + DD T
Sbjct: 274 MYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVGKFKQAVKLFRDMQISGVKADDAT 333
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ +V S+CG +G L+L VH Y V K ++ NSLIDMY KCG + A+++F
Sbjct: 334 IATVVSSCGQMGALDLGRYVHAYC-DVHGLGKGISVK-NSLIDMYSKCGDIKKAHEIFRG 391
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSACVHGGKVQE 343
+ + + SWT MI+G+A NGL+ EALD F M E G + PN +TF+GVL++C HGG V++
Sbjct: 392 LVKRDDFSWTVMIMGFAVNGLSGEALDLFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQ 451
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
G H F M VY I PR HYGCMVDLLGRA LL EA +E MP+ +V IW L+ AC
Sbjct: 452 GYHHFHRMSKVYGIAPRIEHYGCMVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFAC 511
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
G V + E+VA+ ++ELEP G V+LSN+YA+ W +V ++R M ++K P
Sbjct: 512 RARGEVGLAEYVAERVEELEPSRCGGNVLLSNVYATTSRWVDVNKVRTGMGRSRVSKRPG 571
Query: 464 YSL 466
S+
Sbjct: 572 CSV 574
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 66/383 (17%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL------------------- 99
++C + QL Q++A R +L ++F ++R + L
Sbjct: 22 ARCASARQLEQLHA---RAVLLGHARSSFVAAKLVRAFADLGHLRAARAVAAVRAHSQSG 78
Query: 100 --EAPKKALDIYIFMSRA--GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
A + A+ +Y M R GV P +T+ VLKA+ + L G Q+H + G +++
Sbjct: 79 SSAAARDAVALYAQMHRGCPGVRPLTFTVSSVLKAAARREMLREGEQVHVHVFKNGFQTD 138
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
E + + LY++ G + AR+VFD + +N +IA + G + A ++F +
Sbjct: 139 ERIATTLVDLYARCGRLDDARRVFDRLLVKDAQLYNTMIAAYMEAGEVELAEELFEVMP- 197
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK--------------------- 254
E + T++ + + GD++ A K+VF++ +
Sbjct: 198 ---ERNTHTLMEMVGGYSARGDMDSA----KHVFEMANGVVNMVLCTAMISGFAKTGSVD 250
Query: 255 ---------QKSDTLMLNSLID-MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
++ D N +I MY KCG ++ A KVF + + NV WTSMI GY G
Sbjct: 251 DARSVFDGMRQRDVATWNVMIGVMYAKCGLVEDARKVFDAMPERNVVCWTSMISGYTQVG 310
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+A+ F M+ SG++ + T V+S+C G + G+ + +V+ + +
Sbjct: 311 KFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGR-YVHAYCDVHGLGKGISVK 369
Query: 365 GCMVDLLGRAGLLEEARAMVEGM 387
++D+ + G +++A + G+
Sbjct: 370 NSLIDMYSKCGDIKKAHEIFRGL 392
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 114/221 (51%), Gaps = 9/221 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I YT++ K+A+ ++ M +GV D T+ V+ + Q+ AL++GR +H+
Sbjct: 299 WTSMISGYTQVGKFKQAVKLFRDMQISGVKADDATIATVVSSCGQMGALDLGRYVHAYCD 358
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL ++ I +YSK GD +KA ++F +R SW +I G + +G + EA+D
Sbjct: 359 VHGLGKGISVKNSLIDMYSKCGDIKKAHEIFRGLVKRDDFSWTVMIMGFAVNGLSGEALD 418
Query: 209 MFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELAL-QVHKY--VFQVKSKQKSDTLMLNS 264
+F +++ G P+++T + V ++C G +E H+ V+ + + +
Sbjct: 419 LFAQMEEEGEVMPNEITFLGVLTSCSHGGLVEQGYHHFHRMSKVYGIAPRIEH----YGC 474
Query: 265 LIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
++D+ G+ + A + E+ P+V+ W S++ A G
Sbjct: 475 MVDLLGRAKLLAEAEQFIEEMPIAPDVAIWRSLLFACRARG 515
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 220/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL +++ M R+ P+ +T VL + E+GRQ+HS
Sbjct: 79 WTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIF 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ E++ F S + +Y+KAG +AR VF+ PER + S AII+G +Q G +EA++
Sbjct: 139 KRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALE 198
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L++ G + VT S+ +A L L+ QVH +V ++ + ++ NSLIDM
Sbjct: 199 LFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHV--LRCELPFYVVLQNSLIDM 256
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG ++ A K+F + V SW +M+VGY+ +G E + F MRE ++P+ VT
Sbjct: 257 YSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVT 316
Query: 328 FVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F+ VLS C HGG +G F EMM +IE HYGC++DLLGRAG +EEA +++
Sbjct: 317 FLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKK 376
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP + IWG L+GAC N +GE+V L E+EP + G YV+LSN+YAS G WE+V
Sbjct: 377 MPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDV 436
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+R +M + + K P S
Sbjct: 437 RNVRELMMEKAVIKEPGRS 455
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 144/274 (52%), Gaps = 8/274 (2%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
A+ G+++H+ ++ + + I LY+K AR VFDE ER + SW A+I+
Sbjct: 25 AVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMIS 84
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G SQ G A EA+ +F+ + + EP++ T +V S+C EL Q+H ++F K
Sbjct: 85 GYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIF--KRNY 142
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
++ + +SL+DMY K GR+ A VF + + +V S T++I GYA GL EAL+ F
Sbjct: 143 ENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCR 202
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF--AHYGCMVDLLGR 373
++ G+ N+VT+ +L+A + GK ++ +V + E F ++D+ +
Sbjct: 203 LQREGMSSNYVTYASLLTALSGLAALDHGK---QVHSHVLRCELPFYVVLQNSLIDMYSK 259
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
G L AR + MP++ V+ W ++ K G
Sbjct: 260 CGNLNYARKIFNNMPVRT-VISWNAMLVGYSKHG 292
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 223/409 (54%), Gaps = 34/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + +P++AL ++ M P+ T+ VL A + LE GR
Sbjct: 200 WNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIE 259
Query: 149 RLGLESNEFCESGFISLY-------------------------------SKAGDFEKARK 177
R G++ N + + +Y +K GD++ AR+
Sbjct: 260 RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARR 319
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLG 236
VFD P + +WNA+I+ Q+G+ KEA+ +F L+ +P++VT+ S +AC LG
Sbjct: 320 VFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLG 379
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
++L +H Y+ K K + + SLIDMY KCG ++ A +VF+ +++ +V W++M
Sbjct: 380 AMDLGGWIHVYI--KKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAM 437
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G A+D F M+E+ ++PN VTF +L AC H G V EG+ FF M+ VY
Sbjct: 438 IAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYG 497
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ P HY CMVD+LGRAG LEEA ++E MP+ + +WG L+GAC +GNV++ E
Sbjct: 498 VVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMAC 557
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L E + + GAYV+LSNIYA G W+ V R+R MK L K P S
Sbjct: 558 SRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCS 606
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 212/500 (42%), Gaps = 81/500 (16%)
Query: 17 SSHPLLHRLC--KTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHI 74
S+ P+L C K H + H + F D A LS ++L +++ I
Sbjct: 31 STVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQI 90
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQ 133
R ++ + WN +IR + P + L ++I M + P+ YT P V+KA+ +
Sbjct: 91 PRPNL-------YTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATE 143
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+ +L G+ +H + ++ S+ F + I YS GD + A VF + E+ + SWN++
Sbjct: 144 VSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSM 203
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I+G Q G +EA+ +F +K P+ VTMV V SAC DLE Y+ ++
Sbjct: 204 ISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI--ERN 261
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA------------ 301
+ ++ N+++DMY KCG ++ A ++F ++++ ++ SWT+MI GYA
Sbjct: 262 GIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVF 321
Query: 302 -------------------ANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKV 341
NG EAL F ++ +PN VT L+AC G +
Sbjct: 322 DVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAM 381
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA---------------RAMVEG 386
G +K I+ F ++D+ + G LE+A AM+ G
Sbjct: 382 DLGGWIHVYIKK-QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAG 440
Query: 387 MPM-------------------KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ M K N V + L+ AC G V G ++ +
Sbjct: 441 LAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVP 500
Query: 428 GA--YVVLSNIYASRGLWEE 445
G+ Y + +I G EE
Sbjct: 501 GSKHYACMVDILGRAGCLEE 520
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/445 (34%), Positives = 242/445 (54%), Gaps = 23/445 (5%)
Query: 22 LHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH 81
LH C +F V + + LD + +KC LL +I+ +
Sbjct: 232 LHGYCVRRSFDNGVVV--GTGLLDMY-----------AKCQCLLYARKIFD-------VM 271
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIG 140
W+ +I Y + K+AL+++ M + + P TL VL+A +L L G
Sbjct: 272 GVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R+LH ++LG + + +S+Y+K G + A + FDE + S++AI++G Q+
Sbjct: 332 RKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQN 391
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A A+ +F ++ G +PD TM+ V AC L L+ H Y+ + +DTL
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL--IVRGFATDTL 449
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+LIDMY KCG++ A +VF +D+ ++ SW +MI+GY +GL EAL FH + G
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++P+ +TF+ +LS+C H G V EG+ +F+ M + I PR H CMVD+LGRAGL++EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ MP + +V IW L+ AC N+++GE V+K +Q L P S G +V+LSNIY++
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 629
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++ IR K L KIP S
Sbjct: 630 GRWDDAAHIRITQKDWGLKKIPGCS 654
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 164/342 (47%), Gaps = 23/342 (6%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN IIR Y A+D+Y M GV P+ YT P VLKA L A+E G ++HS A
Sbjct: 77 WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLES+ F + + Y+K G +A+++F R + +WNA+IAG S G +A+
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQ 196
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + +++ G P+ T+V V G L +H Y V+ + ++ L+DM
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYC--VRRSFDNGVVVGTGLLDM 254
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVT 327
Y KC + A K+F + N SW++MI GY A+ EAL+ F M + + P VT
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL---------GRAGLLE 378
VL AC + G+ + Y I+ G ++D+L + G+++
Sbjct: 315 LGSVLRACAKLTDLSRGRKL-----HCYIIK-----LGSVLDILLGNTLLSMYAKCGVID 364
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+A + M K +V + ++ C + GN + + + +Q
Sbjct: 365 DAIRFFDEMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQ 405
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 14/281 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+A Q +L +++H ++ ++ LY AR++FDE P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN II + +G AID++ + G P+ T V AC L +E +++H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ +SD + +L+D Y KCG + A ++F + +V +W +MI G + GL
Sbjct: 134 HAKMF--GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
++A+ M+E GI PN T VGVL + GK + Y + F + G
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL-----HGYCVRRSFDN-GV 245
Query: 367 MV-----DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+V D+ + L AR + + M ++ N V W ++G
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG 285
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC L A ++H++ +K+ +D+ +L+ L +Y C ++ LA ++F EI P+V
Sbjct: 17 ACIQSKSLTEAKKIHQHF--LKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W +I YA NG + A+D +H M G+RPN T+ VL AC +++G
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
K ++ +E +VD + G+L EA+ + M + +VV W ++ C +G
Sbjct: 135 AK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYGLCD 192
Query: 411 MGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGL 442
+ +QE + P S VL + ++ L
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 221/380 (58%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II+ Y E P +A+ ++ M + + PDC TL + QL + R + +
Sbjct: 316 WNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTL 375
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G + + + +Y+K G + AR VF+ P + + SWN II+G +Q+G A EAI
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAI 435
Query: 208 DMFIGLKKCGFE--PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+M+ +++ G E + T VSV AC G L +++H + +K+ D + SL
Sbjct: 436 EMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL--LKNGLYLDVFVGTSL 493
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
DMYGKCGR+D A +F++I + N W ++I + +G +A+ F M + G++P+H
Sbjct: 494 ADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 553
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFV +LSAC H G V EG+ FEMM+ Y I P HYGCMVDL GRAG LE A ++
Sbjct: 554 ITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIK 613
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP++ + IWG L+ AC GNV +G+ ++HL E+EP G +V+LSN+YAS G WE
Sbjct: 614 SMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEG 673
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V+ IR++ + L K P +S
Sbjct: 674 VDEIRSITSGKGLRKTPGWS 693
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 166/324 (51%), Gaps = 15/324 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN +I Y R + + + +FM +G+ PD T P VLKA C+ + G ++H
Sbjct: 118 YAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKA-CR--NVTDGNKIHC 174
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LA++ G + + + I LY + G AR +FDE P R +GSWNA+I+G Q G AKE
Sbjct: 175 LALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKE 234
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ + GL+ D VT+VS+ SAC GD + +H Y +K +S+ + N L
Sbjct: 235 ALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSY--SIKHGLESELFVSNKL 288
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
ID+Y + G + KVF + ++ SW S+I Y N A+ F MR S I+P+
Sbjct: 289 IDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDC 348
Query: 326 VTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T + + S G+++ + F + K + + + +V + + GL++ ARA+
Sbjct: 349 LTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGN--AVVVMYAKLGLVDSARAV 406
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+P K +V+ W ++ + G
Sbjct: 407 FNWLPNK-DVISWNTIISGYAQNG 429
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/321 (30%), Positives = 161/321 (50%), Gaps = 12/321 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL +S D T+ +L A + G +HS ++
Sbjct: 219 WNAMISGYCQSGNAKEALT----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES F + I LY++ G + +KVFD R L SWN+II + + AI
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIL 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD +T++S+ S LG++ V + + K D + N+++ M
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLR-KGWFLEDITIGNAVVVM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNHV 326
Y K G +D A VF + +V SW ++I GYA NG A+EA++ ++ M E G I N
Sbjct: 394 YAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQG 453
Query: 327 TFVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T+V VL AC G +++G K ++KN ++ + D+ G+ G L++A ++
Sbjct: 454 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVG--TSLADMYGKCGRLDDALSLFY 511
Query: 386 GMPMKANVVIWGCLMGACEKF 406
+P + N V W L+ AC F
Sbjct: 512 QIP-RVNSVPWNTLI-ACHGF 530
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 125/272 (45%), Gaps = 18/272 (6%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L+ + LH+ V N + ++LY G+ AR FD R + +WN +I+G
Sbjct: 67 LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISG 126
Query: 197 LSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+ G + E I F + + G +PD T SV AC ++ D ++H +K
Sbjct: 127 YGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIH--CLALKFGF 181
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + SLI +Y + G + A +F E+ ++ SW +MI GY +G A EAL
Sbjct: 182 MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 316 MRESGIRP-NHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLG 372
G+R + VT V +LSAC G G H + + + +E ++DL
Sbjct: 239 --SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK---HGLESELFVSNKLIDLYA 293
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
G L++ + + + M ++ +++ W ++ A E
Sbjct: 294 EFGSLKDCQKVFDRMYVR-DLISWNSIIKAYE 324
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 221/378 (58%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I+ Y +AL ++ M GV ++ L A +L L+ GR++H L V
Sbjct: 396 WNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLV 455
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+GLESN + I++Y K + A +VFDE + SWNA+I G +Q+G +++A+
Sbjct: 456 RIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVR 515
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD T+VS+ A + D A +H Y ++ Q D +L +LIDM
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQ--DVYVLTALIDM 573
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+ +A +F +V +W +MI GY ++G A++ F M+ SG PN TF
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC H G V EG+ +F MK Y +EP HYG MVDLLGRAG L EA + ++ MP
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + ++G ++GAC+ NV++ E A+ + ELEP +V+L+NIYA+ LW++V R
Sbjct: 694 MEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVAR 753
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ + L K P +S+
Sbjct: 754 VRTAMEKKGLQKTPGWSI 771
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 167/336 (49%), Gaps = 27/336 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN ++ Y R + A+ + + M G PD TL VL A AL R++H+ A
Sbjct: 294 WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFA 353
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
VR G + + + +Y K G + ARKVFD +R SWNA+I G +++G A EA+
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G + DV++++ ACG LG L+ +VH+ + V+ +S+ ++N+LI
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELL--VRIGLESNVNVMNALIT 471
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC R DLA +VF E+ SW +MI+G NG + +A+ F M+ ++P+ T
Sbjct: 472 MYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFT 531
Query: 328 FVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
V ++ A +HG ++ + ++VY + ++D+ + G
Sbjct: 532 LVSIIPALADISDPLQARWIHGYSIR-----LHLDQDVYVLT-------ALIDMYAKCGR 579
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ AR++ + +V+ W ++ G+ K+
Sbjct: 580 VSIARSLFNSARDR-HVITWNAMIHGYGSHGSGKVA 614
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 103 KKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
+ AL + MS A G P T +LK L GR +H+ GL +
Sbjct: 206 RGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATA 265
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEP 220
++Y+K AR+VFD P R +WNA++AG +++G A+ A+ M + ++ + G P
Sbjct: 266 LANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERP 325
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
D VT+VSV AC L +VH F V+ + +++D+Y KCG +D A K
Sbjct: 326 DAVTLVSVLPACADAQALGACREVH--AFAVRGGFDEQVNVSTAILDVYCKCGAVDSARK 383
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
VF + N SW +MI GYA NG A EAL F M G+ V+ + L AC G
Sbjct: 384 VFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGF 443
Query: 341 VQEGKHFFEMMKNV 354
+ EG+ E++ +
Sbjct: 444 LDEGRRVHELLVRI 457
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I T+ + + A+ ++ M V PD +TL ++ A + R
Sbjct: 491 YKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARW 550
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H ++RL L+ + + + I +Y+K G AR +F+ +R + +WNA+I G G
Sbjct: 551 IHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGS 610
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM- 261
K A+++F +K G P++ T +SV SAC G L + +Y +K + M
Sbjct: 611 GKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG---LVDEGQEYFSSMKEDYGLEPGME 667
Query: 262 -LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+++D+ G+ G++ A+ ++ +P +S + +M+
Sbjct: 668 HYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 231/406 (56%), Gaps = 10/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++++ ++++ + + M+ W ++I Y + + P +A+ + M + P
Sbjct: 98 KCGSVVEAHKVFDKMRKKDMVS-------WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKP 150
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ +T +LKA+ IG Q+H+LAV+ + + S + +Y++ G + A VF
Sbjct: 151 NGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVF 210
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ + SWNA+I+G ++ G + A+ +F +++ GFE T S+ S +G LE
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALE 270
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
VH ++ VKS+QK + N+++DMY K G M A KVF + ++ +W SM+
Sbjct: 271 QGKWVHAHM--VKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+A GL EA+ F MR+SGI N +TF+ +L+AC HGG V+EGKH+F+M+K Y +EP
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEP 387
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
HY +VDLLGRAGLL A + MPM+ +WG L+ AC N K+G++ A H+
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHV 447
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L+P G V+L NIYAS G W+ R+R +MK + K PA S
Sbjct: 448 FQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACS 493
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 7/295 (2%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A Q L+ R++H E + F ++ I LY K G +A KVFD+ ++ +
Sbjct: 58 ITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKDM 117
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW ++IAG +Q+ EAI + G+ K F+P+ T S+ A G+ D + Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIH-- 175
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
VK D + ++L+DMY +CG+MD+A VF ++D N SW ++I G+A G
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
AL F M+ +G H T+ + S G +++GK M Q F M
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVG-NTM 294
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
+D+ ++G + +AR + E + + ++V W ++ A ++G +G+ H +E+
Sbjct: 295 LDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG---LGKEAVSHFEEM 345
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 214/378 (56%), Gaps = 4/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y KAL +YI M +G D TL KA+ L L+ G+Q+H++ V
Sbjct: 1106 WNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVV 1165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + F SG + +Y K G+ E AR+VF E P +W +I+G ++G+ + A+
Sbjct: 1166 KRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALF 1225
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ +PD+ T ++ AC L LE Q+H + VK D ++ SL+DM
Sbjct: 1226 TYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANI--VKLNCAFDPFVMTSLVDM 1283
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F + ++SW +MIVG A +G A EAL F YM+ G+ P+ VTF
Sbjct: 1284 YAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTF 1343
Query: 329 VGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+GVLSAC H G V E ++F+ M KN Y IEP HY C+VD L RAG +EEA ++ M
Sbjct: 1344 IGVLSACSHSGLVSEAYENFYSMQKN-YGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P +A+ ++ L+ AC + + G+ VA+ L LEP AYV+LSN+YA+ WE V
Sbjct: 1403 PFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVA 1462
Query: 448 RIRAVMKHRNLAKIPAYS 465
R +M+ N+ K P +S
Sbjct: 1463 SARNMMRKVNVKKDPGFS 1480
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 187/376 (49%), Gaps = 16/376 (4%)
Query: 41 SSFLDTHEDPAKIVATQLS---KCT-NLLQLNQIYAHIIRTHMLHSY-SAAFHWNNIIRL 95
S F T P + LS KC N+L+L Q A+ + M S WN +
Sbjct: 850 SEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSR 909
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
+ + +A+D ++ M + V D T ++L L LE+G+Q+H + +R GL+
Sbjct: 910 FLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQV 969
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
+ I++Y KAG +AR VF + E L SWN +I+G + G + ++ MF+ L +
Sbjct: 970 VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLR 1029
Query: 216 CGFEPDDVTMVSVTSACGSL-GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
PD T+ SV AC SL G LA Q+H +K+ D+ + +LID+Y K G+
Sbjct: 1030 DSLLPDQFTVASVLRACSSLEGGYYLATQIHACA--MKAGVVLDSFVSTALIDVYSKRGK 1087
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
M+ A +F D +++SW +++ GY +G +AL + M+ESG R + +T V A
Sbjct: 1088 MEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKA 1147
Query: 335 CVHGGKV--QEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
GG V ++GK ++K + ++ F G ++D+ + G +E AR + +P
Sbjct: 1148 A--GGLVGLKQGKQIHAVVVKRGFNLD-LFVTSG-VLDMYLKCGEMESARRVFSEIPSPD 1203
Query: 392 NVVIWGCLMGACEKFG 407
+V W ++ C + G
Sbjct: 1204 DVA-WTTMISGCVENG 1218
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 8/214 (3%)
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
LP C++ +L+ + L +G++ H+ + G + F + I++Y+K G ARK
Sbjct: 656 LPQCFS---ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARK 712
Query: 178 VFDENPE--RKLGSWNAIIAGLSQDG-RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+FD P+ R L +WNAI++ L+ ++ + +F L++ T+ V C
Sbjct: 713 LFDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLL 772
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
+ +H Y VK + D + +L+++Y K G + A +F + +V W
Sbjct: 773 SASPSASESLHGYA--VKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWN 830
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
M+ Y L EA+ F +G RP+ VT
Sbjct: 831 VMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 38/323 (11%)
Query: 89 WNNIIR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN I+ L + ++ + R+ V +TL V K + LH A
Sbjct: 727 WNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYA 786
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V++GL+ + F +++Y+K G +AR +FD R + WN ++ EA+
Sbjct: 787 VKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAM 846
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + GF PDDVT+ + L ++ K + ++K +
Sbjct: 847 LLFSEFHRTGFRPDDVTLRT----------LSRVVKCKKNILELKQFKA----------- 885
Query: 268 MYGKCGRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
A K+F ++ D +V W + + G A EA+DCF M S + + +
Sbjct: 886 ---------YATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGL 936
Query: 327 TFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TFV +L+ ++ GK H M + Q+ + C++++ +AG + AR+ V
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQV---VSVGNCLINMYVKAGSVSRARS-V 992
Query: 385 EGMPMKANVVIWGCLMGACEKFG 407
G + +++ W ++ C G
Sbjct: 993 FGQMNEVDLISWNTMISGCTLSG 1015
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 213/366 (58%), Gaps = 4/366 (1%)
Query: 96 YTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
Y+R PK+AL +Y M + G L + + + LKA L L GR +H+ ++ +
Sbjct: 152 YSRNGYPKEALLLYYEMVCQFGQLGN-FAFSMALKACSDLGDLRTGRAVHAQVLKATEDP 210
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
++ + + LYS+ G FE+A ++FD P R L SWN++IAGL + EAI+ F ++
Sbjct: 211 DQVVNNALLRLYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQ 270
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
G VT+ ++ C + L ++H + VKS K D +LNSL+DMY KCG
Sbjct: 271 GKGMGFSWVTLTTILPVCARVTALGSGKEIHAVI--VKSTAKPDAPVLNSLVDMYAKCGA 328
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
MD +VF + +++SW ++I GYA NG EA++ F M SG P+ +TF+ +LS
Sbjct: 329 MDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSG 388
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G +G FEMMK + I P HY C+VD+LGRAG ++EA +V+ MP K
Sbjct: 389 CSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGS 448
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+ +C GNV + E VAK L ELEP + G YV+LSNIYA+ G+WE V+ +R M+
Sbjct: 449 IWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFME 508
Query: 455 HRNLAK 460
R + K
Sbjct: 509 KRGMTK 514
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 120/258 (46%), Gaps = 5/258 (1%)
Query: 41 SSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLE 100
+ L EDP ++V L + L + + +R + WN++I + E
Sbjct: 201 AQVLKATEDPDQVVNNALLR---LYSEDGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKE 257
Query: 101 APKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCES 160
+A++ + M G+ TL +L ++ AL G+++H++ V+ + + +
Sbjct: 258 GVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDAPVLN 317
Query: 161 GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
+ +Y+K G + R+VF+ + L SWN +I G + +GR EA++ F + GF P
Sbjct: 318 SLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQEMICSGFSP 377
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
D +T +++ S C G + ++ + + ++ L+D+ G+ GR+ A +
Sbjct: 378 DGITFIALLSGCSHAGLADDGCRLFE-MMKMDHGISPTVEHYACLVDVLGRAGRIKEALE 436
Query: 281 VFWEID-QPNVSSWTSMI 297
+ + +P S W S++
Sbjct: 437 IVKNMPFKPTGSIWGSLL 454
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 157/364 (43%), Gaps = 29/364 (7%)
Query: 50 PAKIVATQLSKCTNLLQLN---QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
PA ++T L+ TN+ + ++ H + L S S + + +RL + A
Sbjct: 4 PAISLSTNLTVSTNITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIESWPSKSPA- 62
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL------GLESNEFCES 160
PD + L + ALE G++L+ + L +N +
Sbjct: 63 ----------TAPDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKG 112
Query: 161 GFISLYSKAGDFEKARKVFD---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
I+L+S G ++AR+VF+ E+ + W A+ G S++G KEA+ ++ + C
Sbjct: 113 KLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEM-VCQ 171
Query: 218 F-EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
F + + AC LGDL VH V +K+ + D ++ N+L+ +Y + G +
Sbjct: 172 FGQLGNFAFSMALKACSDLGDLRTGRAVHAQV--LKATEDPDQVVNNALLRLYSEDGCFE 229
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A ++F + N+ SW S+I G EA++ F M+ G+ + VT +L C
Sbjct: 230 EALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCA 289
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ GK ++ +P +VD+ + G ++ R + GM K ++ W
Sbjct: 290 RVTALGSGKEIHAVIVK-STAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK-DLTSW 347
Query: 397 GCLM 400
L+
Sbjct: 348 NTLI 351
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 7/145 (4%)
Query: 265 LIDMYGKCGRMDLAYKVFWE----IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
LI ++ CGR+D A +VF + +D P S W +M +GY+ NG EAL ++ M
Sbjct: 114 LITLFSVCGRVDEARRVFEDGGEDVDLPE-SVWVAMGIGYSRNGYPKEALLLYYEMVCQF 172
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ + F L AC G ++ G+ + + +P ++ L G EEA
Sbjct: 173 GQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATE-DPDQVVNNALLRLYSEDGCFEEA 231
Query: 381 RAMVEGMPMKANVVIWGCLMGACEK 405
M +GMP + N+V W L+ K
Sbjct: 232 LRMFDGMPHR-NLVSWNSLIAGLVK 255
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 236/444 (53%), Gaps = 22/444 (4%)
Query: 22 LHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH 81
LH L T R ++ + A+S LD + KC L + ++ + R
Sbjct: 400 LHSLSVKSTLRSNICV--ANSILDMY-----------GKCEALSEACCMFDEMERRD--- 443
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
A WN +I + + ++ L+++ M R + PD +T VLKA AL G
Sbjct: 444 ----AVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM 499
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H+ ++ GL + F I +Y K G E+A+K+ D ++ + SWNAIIAG +
Sbjct: 500 EIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLK 559
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+++A F + K +PD+ T V AC +L + L Q+H + +K + SD +
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQI--IKLELHSDVYI 617
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
++L+DMY KCG M + VF + + +W +MI GYA +GL EAL F M+ +
Sbjct: 618 TSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENV 677
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RPNH TFV +L AC H G + +G H+F M Y +EP+ HY CM+D++GR+G + EA
Sbjct: 678 RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEAL 737
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+++ MP +A+ VIW L+ C+ GN+++ E + +LEP A ++LSNIYA G
Sbjct: 738 KLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAG 797
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
+W +V +R +M++ L K P S
Sbjct: 798 MWGKVSEMRKMMRYNKLKKEPGCS 821
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 177/374 (47%), Gaps = 25/374 (6%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +I+ + + H L Y+A II R E +AL + + ++G+
Sbjct: 323 AKCGSLADAQRIFNSLPK-HSLQCYNA------IIVGCVRNEKGFEALQFFQLLLKSGLG 375
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
+ +L A + GRQLHSL+V+ L SN + + +Y K +A +
Sbjct: 376 FNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCM 435
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE R SWNA+IA Q+G +E +++F + + EPD T SV AC S L
Sbjct: 436 FDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQAL 495
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+++H + +KS D+ + +LIDMY KCG ++ A K+ I+Q + SW ++I
Sbjct: 496 NSGMEIHNRI--IKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIA 553
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF------FEMMK 352
G+ + +A F+ M + ++P++ T+ VL AC + V GK E+
Sbjct: 554 GFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHS 613
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG--ACEKFGNVK 410
+VY +VD+ + G ++++ + E P K + V W ++ A G
Sbjct: 614 DVYITST-------LVDMYSKCGNMQDSALVFEKAPNK-DFVTWNAMICGYAQHGLGEEA 665
Query: 411 MGEWVAKHLQELEP 424
+G + L+ + P
Sbjct: 666 LGYFERMQLENVRP 679
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+++ + + +K++D+++ M R+ V D T +VLKA L +G Q+H L
Sbjct: 143 WNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI 202
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
VR+G + S + +Y+K + + K+F E P + W+AIIAG Q+ +
Sbjct: 203 VRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGL 262
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F ++K G SV +C L L++ Q+H + +K SD + + +D
Sbjct: 263 ELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHA--LKCDFGSDITVGTATLD 320
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A ++F + + ++ + ++IVG N EAL F + +SG+ N ++
Sbjct: 321 MYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEIS 380
Query: 328 FVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
G SAC +G+ + +K+ + A+ ++D+ G+ L EA M +
Sbjct: 381 LSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVAN--SILDMYGKCEALSEACCMFDE 438
Query: 387 MPMKANVVIWGCLMGACEKFGN 408
M + + V W ++ A E+ GN
Sbjct: 439 ME-RRDAVSWNAVIAAHEQNGN 459
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 29/316 (9%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG-RQLHSLAVRLGLES 154
Y L+ K+A + M +G +PD Y ++K + L + ++ R +
Sbjct: 56 YNSLKPGKQA---HARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISY 112
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL- 213
N IS Y+ AG+ A + F + P+R + SWN++++G Q+G +++ID+F+ +
Sbjct: 113 NTM-----ISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMG 167
Query: 214 --KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++ GF D T V AC L D L +QVH + V+ D + ++L+DMY K
Sbjct: 168 RSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLI--VRMGFYKDVVTGSALLDMYAK 223
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
C R+D + K+F EI N W+++I G N L+ F M++ GI + + V
Sbjct: 224 CKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASV 283
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGM 387
+C ++ G + + ++ F +D+ + G L +A+ + +
Sbjct: 284 FRSCAGLSALKVGTQL-----HAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSL 338
Query: 388 PMKA----NVVIWGCL 399
P + N +I GC+
Sbjct: 339 PKHSLQCYNAIIVGCV 354
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 58/242 (23%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T + C L+ Q H + + S D + N L+ MY +C ++ AYKVF
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARM--IVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102
Query: 284 EIDQPNVSSWTSMIVGYAANG---LANE----------------------------ALDC 312
++ Q +V S+ +MI GYA G LANE ++D
Sbjct: 103 KMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDV 162
Query: 313 FHYM-RESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPR 360
F M R + + TF VL AC VHG V+ G F+ K+V
Sbjct: 163 FLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMG--FY---KDV------ 211
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
++D+ + L+++ + +P+K N V W ++ C + +G + K +Q
Sbjct: 212 -VTGSALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGCVQNDEHILGLELFKEMQ 269
Query: 421 EL 422
++
Sbjct: 270 KV 271
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 231/414 (55%), Gaps = 36/414 (8%)
Query: 87 FHWNNIIRLYT-RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +I+ Y+ + + +Y + G LP+ +T + A L + +G+ LH+
Sbjct: 12 FLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLSSSSLGQMLHT 71
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G E + F + + +Y+K G E ARK+FDE P R + WNA++AGL++ G
Sbjct: 72 HFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVRGVPRWNAMMAGLARFGDMDG 131
Query: 206 AIDMF---------------------------IGL-----KKCGFEPDDVTMVSVTSACG 233
A+++F +GL ++ G P+ VT+VS+ AC
Sbjct: 132 ALELFXSMPSRNVVPWTTMISGYSWNKQYDKALGLFLGMEQEKGIMPNAVTLVSILPACA 191
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ-PNVSS 292
+L LE+ +V Y K+ + N++++MY KCG++D A++VF EI N+ S
Sbjct: 192 NLXALEIGQRVEAYA--RKNGFFKNXYASNAVLEMYVKCGKIDAAWRVFNEIGSLRNLCS 249
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W SM+VG A +G +AL+ + M G P+ VTFVG+L AC GG V++G+H F+
Sbjct: 250 WNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGMVKKGRHIFKSKT 309
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ I P+ HYGCMVDLLGRAG L EA +++ M MK + VIWG L+GAC GNV++
Sbjct: 310 TSFYIIPKLEHYGCMVDLLGRAGQLREAYEVIQSMSMKPDSVIWGALLGACSFHGNVELA 369
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
E A+ L LEPW+ G YV+LSNIYAS G W+ V ++R VMK + K +S
Sbjct: 370 EIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSKITKSAGHSF 423
>gi|297839315|ref|XP_002887539.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
lyrata]
gi|297333380|gb|EFH63798.1| hypothetical protein ARALYDRAFT_339633 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/400 (37%), Positives = 237/400 (59%), Gaps = 16/400 (4%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP---DCYTLPIVLKASCQ 133
+ +LH ++ + N+ ++ Y P KAL F R P D +++ +KAS
Sbjct: 19 SFLLHYHTNSLKSNHTLKHYLESGEPIKAL--LNFQHRFRESPSFVDSFSVLFAIKASSA 76
Query: 134 LFALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK-LGSWN 191
A GRQ+H+L +LG + ++ + YS AGD + AR+VFDE PE++ + W
Sbjct: 77 QKASSFDGRQIHALVRKLGFNAVIQIQTSLVGFYSSAGDLDDARQVFDETPEKQNIVLWT 136
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
A+I+ S++ + EAI +F +++ E D+V + + SAC LG +++ Q++ +
Sbjct: 137 AMISAYSENENSVEAIKLFKRMEEEKIELDEVIVTAALSACADLGAVQMGEQIYSRSIKR 196
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
K + D + NSL++MY K G ++ A K+F E + +V+++T MI GYA NG A E+L+
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGEIEKARKLFDETMRKDVTTYTCMIFGYALNGEAQESLE 256
Query: 312 CFHYMR------ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
F M+ ++ I PN VTF+GVL AC H G V+EGK +F+ M Y ++PR AH+G
Sbjct: 257 LFKKMKMIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKQYFKSMIVDYNLKPRDAHFG 316
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
CMVDL R+G L++A ++ MP+K N VIW L+GAC GNV++GE V K + +LE
Sbjct: 317 CMVDLFCRSGHLKDAHEFIKQMPIKPNAVIWRTLLGACILHGNVELGEEVQKRIFKLERD 376
Query: 426 SDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G YV LSNIYAS+G+W+E ++R ++ R ++P S
Sbjct: 377 HVGDYVALSNIYASKGMWDEKWKMRDRVRKR---RVPGKS 413
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 140/321 (43%), Gaps = 64/321 (19%)
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
++ T M+ +YS + I+L+ R+E K LD I + L A
Sbjct: 133 VLWTAMISAYSENENSVEAIKLFKRMEEEKIELDEVIVTA-------------ALSACAD 179
Query: 134 LFALEIGRQLHSLAV----RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
L A+++G Q++S ++ RL ++ + +++Y K+G+ EKARK+FDE + + +
Sbjct: 180 LGAVQMGEQIYSRSIKRKRRLAMDLT--LRNSLLNMYVKSGEIEKARKLFDETMRKDVTT 237
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCG------FEPDDVTMVSVTSACGSLGDLELALQ 243
+ +I G + +G A+E++++F +K P+DVT + V AC G +E Q
Sbjct: 238 YTCMIFGYALNGEAQESLELFKKMKMIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKQ 297
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
K + V K ++D++ + G +
Sbjct: 298 YFKSMI-VDYNLKPRDAHFGCMVDLFCRSGHLK--------------------------- 329
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE-PRFA 362
D ++++ I+PN V + +L AC+ G V+ G+ E+ K ++++E
Sbjct: 330 -------DAHEFIKQMPIKPNAVIWRTLLGACILHGNVELGE---EVQKRIFKLERDHVG 379
Query: 363 HYGCMVDLLGRAGLLEEARAM 383
Y + ++ G+ +E M
Sbjct: 380 DYVALSNIYASKGMWDEKWKM 400
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 227/413 (54%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + +AL+ + M+ G PD TL V+ A L A + G Q+H+ V
Sbjct: 225 WNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVV 284
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENP------------------------ 183
+ N+ + + +Y+K G +AR VFD P
Sbjct: 285 KSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAAR 344
Query: 184 -------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
++ + SWNA+IAG +Q+G +EA+ +F LK+ P T ++ +A +L
Sbjct: 345 SMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLA 404
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
DLEL Q H +V F+ +S ++ D + NSLIDMY KCG ++ +VF + + + S
Sbjct: 405 DLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVS 464
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI+GYA NG EAL+ F M ESG +P+HVT +G L AC H G V+EG+ +F M
Sbjct: 465 WNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMT 524
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ + P HY CMVDLLGRAG LEEA+ ++E MP + + V+W L+ AC+ N+ +G
Sbjct: 525 KEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLG 584
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++VA+ + E++P S G YV+L+N+Y+ G W + +R +M+ R + K P S
Sbjct: 585 KYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCS 637
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 188/390 (48%), Gaps = 47/390 (12%)
Query: 49 DPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRL 99
D A+ V ++S+ N+ N I + ++R + + F WN++I + +
Sbjct: 76 DYARKVFDRMSE-RNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQH 134
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
+ ++ALD ++ M R + + Y+ L A +L L++G Q+H L + + F
Sbjct: 135 DRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG 194
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
SG I YSK G AR+VFD E+ + SWN +I Q+G A EA++ F + + GF+
Sbjct: 195 SGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFK 254
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD--- 276
PD+VT+ SV SAC +L + +Q+H V + K ++D ++ N+L+DMY KCGR++
Sbjct: 255 PDEVTLASVVSACATLAAFKEGVQIHARVVK-SDKFRNDLILGNALVDMYAKCGRVNEAR 313
Query: 277 ----------------------------LAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
A +F I Q ++ SW ++I GY NG E
Sbjct: 314 CVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEE 373
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQI----EPRFAH 363
AL F ++ + P H TF +L+A + ++ G+ ++K+ ++ EP
Sbjct: 374 ALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFV 433
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
++D+ + G +EE + E M K +V
Sbjct: 434 GNSLIDMYMKCGSVEEGLRVFENMVEKDHV 463
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 131/285 (45%), Gaps = 33/285 (11%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE------------------ 181
R +H ++ F ++ I +Y K G + ARKVFD
Sbjct: 43 ARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMR 102
Query: 182 -------------NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
PE+ SWN++IAG +Q R +EA+D F+ + + F +D + S
Sbjct: 103 WGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSG 162
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
SAC L DL+L Q+H + KSK D M + LID Y KCG + A +VF +++
Sbjct: 163 LSACSRLKDLKLGAQIHGLI--SKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEK 220
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
NV SW +I Y NG A EAL+ F M E G +P+ VT V+SAC +EG
Sbjct: 221 NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIH 280
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+ + +VD+ + G + EAR + + MP++ V
Sbjct: 281 ARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAV 325
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 91/222 (40%), Gaps = 37/222 (16%)
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
F D + C L A VH + Q + + + N LID+YGKCG +D
Sbjct: 20 FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCE--EVFIQNRLIDVYGKCGYLDY 77
Query: 278 AYKVFWEIDQPNV-------------------------------SSWTSMIVGYAANGLA 306
A KVF + + NV SW SMI G+A +
Sbjct: 78 ARKVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRF 137
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYG 365
EALD F M N +F LSAC ++ G ++ K+ Y ++ F G
Sbjct: 138 EEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDV-FMGSG 196
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D + GL+ AR + +GM K NVV W CL+ E+ G
Sbjct: 197 -LIDFYSKCGLVGCARRVFDGMEEK-NVVSWNCLITCYEQNG 236
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 213/358 (59%), Gaps = 5/358 (1%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
++ + RAG D + +++A C ++ R++ ++ + I Y
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFD---ETAASADVVSWNVMIDGYV 153
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
K+GD +AR++FD P R + SW +I +Q + +EAI++F ++ G EPD V ++S
Sbjct: 154 KSGDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLS 213
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V SACG LG ++L VH++V + Q + ++N++IDMY KCG + A +VF ++Q
Sbjct: 214 VLSACGDLGVVDLGEWVHRFVLRRGLCQ--EIPLMNAIIDMYVKCGSVKKALEVFEGMEQ 271
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
++ +WT+MI G+A +GL EA++ F M + + PN +TF+ VLS C H G G+ +
Sbjct: 272 KSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWY 331
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
F+ M + Y+I+PR HYGCM+DLLGRAG L EAR +++ MP KAN IWG L+ A G
Sbjct: 332 FKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 391
Query: 408 NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ++GE HL ELEP + G Y++LSNIYA + W+ V +R M+ R L +P S
Sbjct: 392 DTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 449
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 110/218 (50%), Gaps = 4/218 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y +++ P++A++++ M G+ PD L VL A L +++G +H +
Sbjct: 176 WTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLSACGDLGVVDLGEWVHRFVL 235
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + I +Y K G +KA +VF+ ++ + +W +IAG + G EA++
Sbjct: 236 RRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIVTWTTMIAGFALHGLGLEAVE 295
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK-YVFQVKSKQKSDTLMLNSLID 267
+F ++K P+D+T ++V S C +G +L K V Q K K + + +ID
Sbjct: 296 LFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEH--YGCMID 353
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ G+ G + A + ++ + N + W +++ +G
Sbjct: 354 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHG 391
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 249/484 (51%), Gaps = 73/484 (15%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSA------------------------- 85
A I+A+ C ++ L QI+AH + T LH++S
Sbjct: 16 ASILASIAENCQSMNHLKQIHAHSLLTD-LHNHSVILGKMLRFAAVSPSGDLPYAQRLFD 74
Query: 86 ------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---- 135
F +N IIR Y + +P ++++ M + V PD +T ++KA ++
Sbjct: 75 QMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHN 134
Query: 136 ---ALEIGRQLHSLAVRLGLESNEFCESGFISLYS------------------------- 167
LE ++H + G S+ F ++ I+LY+
Sbjct: 135 FPSTLECD-EIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSG 193
Query: 168 ------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ G+ E AR+VFD+ PE+ + SW A+++G S+ ++EA+++F + G PD
Sbjct: 194 LVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPD 253
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+VT+VSV SAC +LGD+E + VH Y+ + + N+LI+MY KCG +D A++V
Sbjct: 254 EVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVS--LCNALINMYAKCGCVDRAWRV 311
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + ++ +W SMI A +G A +A + F M SGI P+ +TF+ +L A H G V
Sbjct: 312 FNNMKRKSLITWNSMISACANHGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLV 371
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG F++M+ Y IE HYGC+VD+LGRAG LEEA ++ MP+ +N ++WG L+
Sbjct: 372 DEGYRLFQIMERDYGIEASIEHYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLA 431
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC +G+V MGE V K L EL+P G Y++L +IY + G E IR M+ K
Sbjct: 432 ACRIYGDVNMGERVVKKLLELKPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKN 491
Query: 462 PAYS 465
P YS
Sbjct: 492 PGYS 495
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 220/378 (58%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I + +KA D+ M++ L PD T+ ++ A QL LE G+ LHS +
Sbjct: 180 WNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYS 239
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
LGL+ N + + +Y K D E A++VF+ E+ + SW ++++GL++ G +EA+
Sbjct: 240 KELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ E D++T+V V SAC G L+ +H + K + D ++ +L+D
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLI--DKFEINCDLVLETALVD 357
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +DLA +VF + NV +W ++I G A +G +A+ F M + P+ VT
Sbjct: 358 MYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVT 417
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +L AC H G V EG F+ MKN +QIEPR HYGC+VDLL RA +++A A +E M
Sbjct: 418 FIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENM 477
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+KAN V+W L+GAC G+ + E + + + ELEP S G YV+LSN+YA W+
Sbjct: 478 PIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHAL 537
Query: 448 RIRAVMKHRNLAKIPAYS 465
++R MK++ + K P S
Sbjct: 538 KLRKQMKNKGIEKTPGCS 555
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 193/381 (50%), Gaps = 35/381 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLH--------------SYSAAFHW--------------- 89
+ CT++ + Q +A ++RTH+LH S+S ++
Sbjct: 19 THCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFI 78
Query: 90 -NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR Y R + P +A+ +Y FM GV D YT P VL A +L A+++GR+ H +
Sbjct: 79 CNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVL 138
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S+ F + I Y G F A VFDE+ R + +WN +I G +++A D
Sbjct: 139 KNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFD 198
Query: 209 MFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ + K PD+VTMVS+ AC LG+LE +H Y ++ + + + N+++D
Sbjct: 199 LLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDE--NLRVNNAILD 256
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC ++ A +VF I + +V SWTSM+ G A +G EAL F M+ + I + +T
Sbjct: 257 MYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEIT 316
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VGVLSAC G + +GK + ++ + ++I +VD+ + G ++ A + M
Sbjct: 317 LVGVLSACAQTGALDQGK-YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRM 375
Query: 388 PMKANVVIWGCLMGACEKFGN 408
++ NV W L+G G+
Sbjct: 376 RVR-NVFTWNALIGGLAMHGH 395
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 171/517 (33%), Positives = 265/517 (51%), Gaps = 64/517 (12%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRL-------CKTHTFRKHVTISAASSFLDTH-EDPAK 52
++S G S+SS+ S HP L++L C K + FL +H +
Sbjct: 24 IISKAIGRSMSSV---SIHPHLNQLFVAALEKCSNLNHLKQL-----QGFLISHGHSQTQ 75
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM 112
A +L + NL + YA I ++ + F + +I Y PK A +Y M
Sbjct: 76 FFAFKLVRFCNLTLADLCYARYIFDNL--TSPNVFLYTAMITAYASYPDPKAAFLLYRNM 133
Query: 113 SRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-------------------- 151
R G + P+ + P VL++ + + +H+ ++ G
Sbjct: 134 VRRGAIRPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSS 193
Query: 152 ------------LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
LE + IS Y++ G+F+ A ++F+ PER + +WNA+IAG +Q
Sbjct: 194 DIGSARQMFDEMLERTVVSWTAMISGYARLGNFDSAIELFESMPERDVPAWNALIAGCAQ 253
Query: 200 DGRAKEAIDMFIGLKKCGFE---------PDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+G EAI +F + E P+ T+ S SACG G L L +H YVF+
Sbjct: 254 NGFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFK 313
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
Q D+ + N+L+DMYGKCG + +A +VF I N++SW S+I A +G + A+
Sbjct: 314 TYPGQ--DSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGSAI 371
Query: 311 DCFHYMRE--SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
D F + G++PN VTFVGVL+AC HGG V++G +FEMM+ Y IEP+ H+GC++
Sbjct: 372 DLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLI 431
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLLGRAG EEA +V GM ++ + V+WG L+ AC+ G + E+ K L E++P + G
Sbjct: 432 DLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGG 491
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++L+NIYA G W+EV ++R ++K +N K P S
Sbjct: 492 YRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCS 528
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 240/473 (50%), Gaps = 64/473 (13%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHS------------------------------YSA 85
++L C NL Q+ QI+ H++R + S +
Sbjct: 54 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +IR Y +A+ +Y M + + P +T +LKA + L +GRQ H+
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA---------- 195
RL + + I +Y K + ARKVFDE PER + SW +IA
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 196 ---------------------GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
G +Q+ + +EA++ F ++K G D+VT+ SAC
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG + A + + + Q SD +++ S LIDMY KCG ++ A VF ++ NV ++
Sbjct: 294 LGASKYADRAVQ-IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 294 TSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+SMI+G A +G A EAL FHYM ++ I+PN VTFVG L AC H G V +G+ F+ M
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ ++P HY CMVDLLGR G L+EA +++ M ++ + +WG L+GAC N ++
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E A+HL ELEP G Y++LSN+YAS G W V R+R ++K + L K PA S
Sbjct: 473 EIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
>gi|356527575|ref|XP_003532384.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61800-like [Glycine max]
Length = 577
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 242/473 (51%), Gaps = 72/473 (15%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML--HSYS------------------------------- 84
+ +C ++ QL+Q++AH I T +L H++
Sbjct: 7 IKQCKSISQLHQVHAHSITTGLLPLHTFPILNNILSTLSSLLTTSSNSNSIITFYALSLF 66
Query: 85 ------AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
+ F +N +IR++T L +P AL ++ + R + PD +T P VLKAS QL +L
Sbjct: 67 HSIPNPSTFSFNTLIRIHTLLLSPLPALHLFSTLRRLSLPPDFHTFPFVLKASAQLHSLS 126
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYS------------------------------- 167
+ + LHS A++ GL + F + I +YS
Sbjct: 127 LAQSLHSQALKFGLLPDLFSLNTLIGVYSIHHRVNDAHKLFYECPHGDVVSYNALIHGLV 186
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
K +AR++FDE P R SW +IAG S +AI++F + + +PD++ +VS
Sbjct: 187 KTRQISRARELFDEMPVRDEISWGTMIAGYSHLKLCNQAIELFNEMMRLEVKPDNIALVS 246
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
V SAC LG+LE VH Y+ +++ + D+ + L+D+Y KCG ++ A VF +
Sbjct: 247 VLSACAQLGELEQGSIVHDYI--KRNRIRVDSYLATGLVDLYAKCGCVETARDVFESCME 304
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
V +W +M+VG+A +G + L+ F M G++P+ VT +GVL C H G V E +
Sbjct: 305 KYVFTWNAMLVGFAIHGEGSMVLEYFSRMVSEGVKPDGVTLLGVLVGCSHAGLVLEARRI 364
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
F+ M+NVY ++ HYGCM D+L RAGL+EE MV+ MP +V WG L+G C G
Sbjct: 365 FDEMENVYGVKREGKHYGCMADMLARAGLIEEGVEMVKAMPSGGDVFAWGGLLGGCRIHG 424
Query: 408 NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
NV++ + A+ + E++P G Y V++NIYA W+++ ++R + AK
Sbjct: 425 NVEVAKKAAQQVMEIKPEDGGVYSVMANIYAHTEQWDDLVKVRRSLSANKRAK 477
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 221/381 (58%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI----VLKASCQLFALEIGRQLH 144
W+ +I + +A ++ M G+ C+ P L+A L L +G QLH
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLH 363
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG ++A +FDE + S++A+++G Q+GRA+
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + S+T + N+
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV--IIRGLASETSICNA 481
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCGR+DL+ +VF + ++ SW +MI GY +GL EA F M G P+
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +LSAC H G V EGKH+F +M++ Y + PR HY CMVDLL R G L+EA +
Sbjct: 542 GVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++A+V +W L+GAC + N+ +G+ V++ +QEL P G +V+LSNIY++ G ++
Sbjct: 602 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P S
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCS 682
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 34/396 (8%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALD---IY 109
I + LS+ +L +QI + +RT +N++IR Y+ +P A D +Y
Sbjct: 68 IASGHLSRAHHLF--DQIPSPDVRT-----------YNDLIRAYSS-SSPTAAADGLHLY 113
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M R V P+ YT P LKA L GR +H A+ GL+++ F + + +Y K
Sbjct: 114 RRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKC 173
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC--GFEPDDVTMVS 227
A +F P R L +WNA++AG + G A+ + ++ P+ T+V+
Sbjct: 174 ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 233
Query: 228 VTSACGSLGDLELALQVHKYVFQV--------KSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
+ G L VH Y + KSK L+ +L+DMY KCG + A
Sbjct: 234 LLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 293
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACV 336
+VF + N +W+++I G+ +A F M G + P + L AC
Sbjct: 294 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 351
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G+ ++ + ++ + +AGL+++A A+ + M +K + V +
Sbjct: 352 SLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSY 409
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
L+ + G + V K +Q D A +V
Sbjct: 410 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMV 445
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 250/459 (54%), Gaps = 12/459 (2%)
Query: 7 GISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQ 66
G+ +S+ S P+L L K F K + + L++ A + +K LQ
Sbjct: 205 GVKPNSVTFSSMLPVLVEL-KLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQ 263
Query: 67 LNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI 126
+ ++ I +++ WN ++ + + A+D+ M G +P+ T
Sbjct: 264 ASNVFNQIGEKNIVS-------WNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTN 316
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL A ++ L G+++H+ A+R G + F + +Y+K G AR+VF + +
Sbjct: 317 VLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFKISLRDE 376
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ S+N +I G SQ E++ +F+ + G + D V+ + V SAC +L L+ +VH
Sbjct: 377 V-SYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHG 435
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V+ + + N+L+D Y KCGR+DLA KVF +I + +SW SMI+GY G
Sbjct: 436 --LAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGEL 493
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
A++ F M+E G+ + V+++ VLSAC HGG V+EGK +FE M+ V I+P HY C
Sbjct: 494 TIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQ-VQNIKPTQMHYAC 552
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
MVDLLGRAGL+EEA ++E +P++ + +WG L+GAC G +++ W A+HL +L+P
Sbjct: 553 MVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQH 612
Query: 427 DGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G Y VLSN+YA G W+E ++R +MK R K P S
Sbjct: 613 SGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCS 651
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
GV D +T P VLKA +++ GR++H + +LG +S+ F + + Y G +
Sbjct: 2 GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGS 234
++VFDE ER + SWN++I S G EAI +F + + GF P+ V++VSV C
Sbjct: 62 KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L D Q+H YV VK+ S + N+L+D+YGKCG + + +VF EI + N SW
Sbjct: 122 LEDGVTGRQIHCYV--VKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMK 352
++I A +AL+ F M + G++PN VTF +L V GK H F +
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR- 238
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ +E ++D+ ++G +A + + K N+V W ++
Sbjct: 239 --FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMV 283
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 195/396 (49%), Gaps = 39/396 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II LE + AL+++ M GV P+ T +L +L + G+++H ++
Sbjct: 178 WNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSL 237
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLES+ F + I +Y+K+G +A VF++ E+ + SWNA++A +Q+ A+D
Sbjct: 238 RFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVD 297
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ G P+ VT +V AC +G L ++H +++ D + N+L DM
Sbjct: 298 LVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARA--IRTGSSVDLFVSNALTDM 355
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++LA +VF +I + S+ +I+GY+ +E+L F M G++ + V++
Sbjct: 356 YAKCGCLNLARRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSY 414
Query: 329 VGVLSACVHGGKVQEGK-------------HFF---------------EMMKNVY-QIEP 359
+GV+SAC + +++GK H F ++ V+ QI
Sbjct: 415 MGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPS 474
Query: 360 R-FAHYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWV 415
R A + M+ G G L A + E M ++ + V + ++ AC G V+ G+
Sbjct: 475 RDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKY 534
Query: 416 AKHL--QELEPWSDGAYVVLSNIYASRGLWEEVERI 449
+H+ Q ++P + Y + ++ GL EE ++
Sbjct: 535 FEHMQVQNIKP-TQMHYACMVDLLGRAGLIEEAVKL 569
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 143/284 (50%), Gaps = 13/284 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I +++ +A+ ++ M+ R+G P+ ++ VL L GRQ+H
Sbjct: 76 WNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYV 135
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL+S + + +Y K G + +R+VFDE ER SWNAII L+ R ++A+
Sbjct: 136 VKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQDAL 195
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+MF + G +P+ VT S+ L + ++H F ++ +SD + N+LID
Sbjct: 196 EMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHG--FSLRFGLESDIFVANALID 253
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY K GR A VF +I + N+ SW +M+ +A N L A+D M+ G PN VT
Sbjct: 254 MYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVT 313
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F VL AC G ++ GK +I R G VDL
Sbjct: 314 FTNVLPACARIGFLRPGK----------EIHARAIRTGSSVDLF 347
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 224/408 (54%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-------------- 134
WN++I Y++ K L ++ M GV D T+ V+ A +L
Sbjct: 621 WNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIE 680
Query: 135 -FALEIGRQLHSLAV-----RLGLESNE-----------FCESGFISLYSKAGDFEKARK 177
+ +E+ L + V R L+S E + I+ Y+K D ARK
Sbjct: 681 DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARK 740
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ P++ L SW+++I+G SQ +A+++F +++ +PD + + SV S+C LG
Sbjct: 741 IFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGA 800
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L VH+YV ++ K+DT+M NSLIDMY KCG A +VF E+ + + SW S+I
Sbjct: 801 LDLGKWVHEYV--RRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSII 858
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NG E+L+ F M G RPN VTF+GVL AC + V+EG FE MK +Y +
Sbjct: 859 IGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSL 918
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP+ HYGC+VDLLGRAG LE+A + MP+ + V+W L+G+C G+V + E V K
Sbjct: 919 EPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTK 978
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L ELEP + G Y +LSN YAS W E +R M ++ K P S
Sbjct: 979 KLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQCMADTDVRKSPGCS 1026
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 223/441 (50%), Gaps = 37/441 (8%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF 111
++VA L QL QI++ +I + W+ +++ Y+ P+ AL ++
Sbjct: 23 RLVALLLEHQDRRRQLLQIHSQLIAHQVFDRRPTP--WHALLKAYSHGPHPQDALQLFRH 80
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY----- 166
+R D Y LKA L QLH L VR G E + + +++Y
Sbjct: 81 -ARWHAADDTYAFTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGC 139
Query: 167 --------------------------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+ G+ E AR +F+ P R + SW+ +I G ++
Sbjct: 140 LADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRA 199
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
R EA+ +F + G P ++T+++V A ++G + + +H Y K D
Sbjct: 200 CRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYC--EKEGLVWDVR 257
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWE-IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ NSLID+Y K G + + +VF E +D+ N+ SWTS+I G+A +GL+ +A++ F MR +
Sbjct: 258 VGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRA 317
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
GIRPN +TF+ VL AC HGG V++G FF+ M Y I P H+GC++D+LGRAG L E
Sbjct: 318 GIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLRE 377
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A ++ P++ N +W L+G C K+G V+MGE K + LE G +VVLSN+
Sbjct: 378 AEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTE 437
Query: 440 RGLWEEVERIRAVMKHRNLAK 460
+ + E +R ++ RN K
Sbjct: 438 LRRFSDAEIVRKLVDQRNSVK 458
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 36/375 (9%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
+LQ + ++AH + + F WN +IR + +AP A+ Y G++PD T
Sbjct: 497 ILQPDLVFAHKVFDQI--EAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLT 554
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP 183
P +LKA ++ AL G Q+H+ +LGL S+ F + I LY+ G+ AR VFDE
Sbjct: 555 FPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV 614
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ + SWN++I G SQ R K+ + +F ++ G + D VTM+ V SAC LGD +A
Sbjct: 615 VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADY 674
Query: 244 VHKYV----------------------FQVKSKQK-------SDTLMLNSLIDMYGKCGR 274
+ +Y+ Q++S +K + + +N++I Y K
Sbjct: 675 MVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQD 734
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A K+F +I + ++ SW+SMI GY+ ++AL+ F M+ + ++P+ + V+S+
Sbjct: 735 IVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSS 794
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA----RAMVEGMPMK 390
C H G + GK E ++ I+ ++D+ + G +EA + M E +
Sbjct: 795 CAHLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLS 853
Query: 391 ANVVIWGCLMGACEK 405
N +I G EK
Sbjct: 854 WNSIIIGLANNGFEK 868
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 226/409 (55%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y+++ ++A+ ++ M G+ PD +TL +L S + ++GR +H V
Sbjct: 203 WNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMV 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
G+E + + + +Y+K G+ + A+ VFD+
Sbjct: 263 VTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALE 322
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
P + + SWN+II Q+G EA+D+F + G +D T+V++ S+C +GD
Sbjct: 323 FFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGD 382
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L L Q H Y+F + S TL N++IDMY KCG + A VF+ + + N SW +I
Sbjct: 383 LALGKQAHSYIFD-NNITLSATL-CNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVII 440
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +G EA++ F M+ SG+ P+ +TF G+LSAC H G V G+H+FE+M + I
Sbjct: 441 GALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGI 500
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P HY CMVDLLGR GLL EA ++++ MP+K +VV+W L+GAC +GN+ +G+ + K
Sbjct: 501 SPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMK 560
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL ++ G YV+LSN+Y+ W++++ I ++ + K A S
Sbjct: 561 QLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISF 609
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 37/348 (10%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N++I+ Y+ P K+L +Y M G+LP+ +T+P VLKA +G +H+
Sbjct: 100 FMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQ 159
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ +LG+ S+ ++ +++Y G AR+VFD+ ER L SWN++I G S+ GR++EA
Sbjct: 160 SFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEA 219
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ MF +++ G EPD T+V + S G+ +L VH ++ V + + D+++ N+L+
Sbjct: 220 VLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHM--VVTGIEIDSIVTNALM 277
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN------------------- 307
DMY KCG + A VF ++ +V SWT MI YA +GL +
Sbjct: 278 DMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNS 337
Query: 308 ------------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNV 354
EA+D F+ M +SG+ N T V +LS+C H G + GK + N
Sbjct: 338 IIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNN 397
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + ++D+ + G L+ A + GMP K N V W ++GA
Sbjct: 398 ITLSATLCN--AIIDMYAKCGALQTAMDVFFGMPEK-NAVSWNVIIGA 442
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
Q +L+ + +H+ + GL + +S + D A K+FD+ P+ +N
Sbjct: 45 QCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNH 104
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+I G S +++ ++ + G P+ T+ V AC + L + VH F K
Sbjct: 105 LIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSF--K 162
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
S + N+++++Y CG + A +VF +I + + SW SMI GY+ G + EA+
Sbjct: 163 LGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLM 222
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
F M+E G+ P+ T VG+LS G G+ F + V IE ++D+
Sbjct: 223 FREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGR-FVHLHMVVTGIEIDSIVTNALMDMYA 281
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ G L+ A+++ + M + +VV W C++ A G
Sbjct: 282 KCGNLKCAKSVFDQM-LDKDVVSWTCMINAYANHG 315
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 17/212 (8%)
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P T+ + C SL L+ VH + + + L L L+ + + A
Sbjct: 33 SPTHQTLHYLIDQCISLKQLK---HVHAQI--ILHGLATQVLTLGKLVSSSVQLRDLRYA 87
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
+K+F +I QPN + +I GY+ + ++L + M GI PN T VL AC
Sbjct: 88 HKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKAC--- 144
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGC----MVDLLGRAGLLEEARAMVEGMPMKANVV 394
+ ++ + + + + C ++++ GL+ AR + + + + +V
Sbjct: 145 --AAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISER-TLV 201
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQE--LEP 424
W ++ K G + + + +QE LEP
Sbjct: 202 SWNSMINGYSKMGRSEEAVLMFREMQEVGLEP 233
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 214/379 (56%), Gaps = 3/379 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR Y + A+ +Y M G++PD +T P VLKA L A+E GR++H
Sbjct: 142 FLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEH 201
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G E + F + I +Y+K G AR+VFD+ R WN+++A SQ+G
Sbjct: 202 VVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDAC 261
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + + G P + T+V+ SA L ++H + + + +S + +L+
Sbjct: 262 LSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSW--RQEFESHDKVKTALV 319
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG + +A +F + V SW +MI GYA +G A EALD F M +P+H+
Sbjct: 320 DMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 378
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFVGVLSAC HGG ++EG FFE M Y+I+P HY CMVDLLG +G L+EA ++
Sbjct: 379 TFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQ 438
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M + + +WG L+ +C+ NV++GE + L ELEP G YV+LSNIYA G WE V
Sbjct: 439 MKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWEGV 498
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M R L K A S
Sbjct: 499 AKLRKLMTDRRLKKSIACS 517
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 126/265 (47%), Gaps = 4/265 (1%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
A++ G+QLH+ G + + ++LY AR +FD P+ + WN +I
Sbjct: 90 AIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIR 149
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G + +G + A+ ++ + G PD+ T V AC +L +E ++H++V V++
Sbjct: 150 GYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHV--VQTGW 207
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D + +LIDMY KCG + A +VF +I + W SM+ Y+ NG + L
Sbjct: 208 EKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSE 267
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M +G+RP T V +SA + +G+ + + E +VD+ + G
Sbjct: 268 MVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWR-QEFESHDKVKTALVDMYAKCG 326
Query: 376 LLEEARAMVEGMPMKANVVIWGCLM 400
+ AR + E + +K VV W ++
Sbjct: 327 SVRVARNLFERLGVK-RVVSWNAMI 350
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 221/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL++++ M R+ P+ +T +L + E GRQ+HS+A+
Sbjct: 131 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAI 190
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+K+G A VF PER + + AII+G +Q G +EA+
Sbjct: 191 KRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALK 250
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L+ G + VT SV +A L L QVH +V ++S Q S ++LNSLIDM
Sbjct: 251 LFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHV--LRSGQYSYVVLLNSLIDM 308
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG + A ++F + + SW +M+VGY+ +G+A E L+ F MRE ++P+ +T
Sbjct: 309 YSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 368
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
++ VLS C HG G + F+ M+ IEP HYGC+VDLLGRAG +EEA ++
Sbjct: 369 YLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKK 428
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP IWG L+G+C +V++G V + L ELEP + G YV+LSN+YAS G WE++
Sbjct: 429 MPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDM 488
Query: 447 ERIRAVMKHRNLAKIPAYS 465
IR +M+ + + K P S
Sbjct: 489 RNIRDLMQEKAVTKEPGRS 507
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 145/284 (51%), Gaps = 28/284 (9%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
A+ G+++H+ ++ + + + I LY+K AR +FDE P+R + SW A+I+
Sbjct: 77 AIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMIS 136
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC-GSLGDLELALQVHKYVFQVKSK 254
SQ G A EA+++F+ + + EP+ T ++ ++C GSLG E Q+H +K
Sbjct: 137 AYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHS--IAIKRN 193
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+S + +SL+DMY K GR+ A+ VF + + +V + T++I GYA GL EAL F
Sbjct: 194 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 253
Query: 315 YMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
++ G+ N VT+ VL+A VH ++ G++ + ++ N
Sbjct: 254 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN---------- 303
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G + AR + + MP + + W ++ K G
Sbjct: 304 --SLIDMYSKCGNVCYARRIFDSMPERT-CISWNAMLVGYSKHG 344
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 221/363 (60%), Gaps = 3/363 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W+ +I Y + + K+AL+++ M ++ V+ P+ +T VL+A L L +G Q+HS
Sbjct: 274 WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCV 333
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++GL+SN F + + +Y+K G+ E + K+F + E+ +WN II G Q G ++A+
Sbjct: 334 LKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKAL 393
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + +P +VT SV A SL LE Q+H +K+ D+++ NSLID
Sbjct: 394 NLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS--LTIKTMYNKDSVVANSLID 451
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCGR+D A F ++D+ + SW ++I GY+ +GL EAL+ F M++S +PN +T
Sbjct: 452 MYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLT 511
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVLSAC + G + +G+ F+ M Y IEP HY CMV LLGR+G +EA ++ +
Sbjct: 512 FVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI 571
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + +V++W L+GAC N+ +G+ A+ + E+EP D +V+LSN+YA+ W+ V
Sbjct: 572 PFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVA 631
Query: 448 RIR 450
+R
Sbjct: 632 YVR 634
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 175/344 (50%), Gaps = 14/344 (4%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S C N+ Q++ I M+ W ++ Y + +L ++ M G
Sbjct: 150 SVCGNVDAARQVFDGIYFKDMVS-------WTGMVACYAENYCHEDSLLLFCQMRIMGYR 202
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ +T+ LK+ L A ++G+ +H A+++ + + + + LY+K+G+ +A++
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGD 237
F+E P+ L W+ +I+ +Q ++KEA+++F +++ P++ T SV AC SL
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L L Q+H V +V S+ + N+L+D+Y KCG ++ + K+F + N +W ++I
Sbjct: 323 LNLGNQIHSCVLKV--GLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTII 380
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQ 356
VGY G +AL+ F M I+P VT+ VL A ++ G+ + +K +Y
Sbjct: 381 VGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYN 440
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ A+ ++D+ + G +++AR + M K + V W L+
Sbjct: 441 KDSVVAN--SLIDMYAKCGRIDDARLTFDKMD-KQDEVSWNALI 481
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 132/272 (48%), Gaps = 10/272 (3%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ +LG +++ F + I YS G+ + AR+VFD + + SW ++A +++
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
++++ +F ++ G+ P++ T+ + +C L ++ VH +V + D +
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDR--DLYVG 243
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-I 321
+L+++Y K G + A + F E+ + ++ W+ MI YA + + EAL+ F MR+S +
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVV 303
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN+ TF VL AC + G + V F M D+ + G +E +
Sbjct: 304 VPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALM-DVYAKCGEIENSV 362
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ G K N V W ++ G V++G+
Sbjct: 363 KLFTGSTEK-NEVAWNTII-----VGYVQLGD 388
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 16/267 (5%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ LH ++ G + F ++ ++ Y G E A K+FDE P S+ + G S+
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ + A + + L + G+E + ++ S+ + L VH YV+ K ++D
Sbjct: 82 SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVY--KLGHQADA 139
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +LID Y CG +D A +VF I ++ SWT M+ YA N ++L F MR
Sbjct: 140 FVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIM 199
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE-----PRFAHYG-CMVDLLGR 373
G RPN+ T L +C G F++ K+V+ R + G +++L +
Sbjct: 200 GYRPNNFTISAALKSC-------NGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTK 252
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLM 400
+G + EA+ E MP K +++ W ++
Sbjct: 253 SGEIAEAQQFFEEMP-KDDLIPWSLMI 278
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/410 (39%), Positives = 228/410 (55%), Gaps = 26/410 (6%)
Query: 76 RTHMLHSYS--AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK--AS 131
+TH L+ + W + I L +R +A M AGV P+ TL +L +
Sbjct: 22 KTHHLNQSTPETTVSWTSRITLLSRNGRLAEAAKELTAMRLAGVEPNHITLIALLSGCSD 81
Query: 132 CQLFALEIGRQLHSLAVRLGLESNE-FCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
C+ +G LH A +LG + N + + +YSK F KAR VFD + +W
Sbjct: 82 CE----PLGDSLHGYACKLGFDRNHVMVGTAILGMYSKRRRFRKARLVFDRMGDXNSVTW 137
Query: 191 NAIIAGLSQD--------------GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
N +I G +D G +EA+ F ++ G EPD V +++ +AC +LG
Sbjct: 138 NTMIDGYXRDLISXTXMINGFVKKGLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLG 197
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L L VH+YV V K++ + NSLID+Y +CG ++ A +VF ++++ V SW S+
Sbjct: 198 ALSFGLWVHRYV--VSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSV 255
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
IVG+AANG A+E+L F M+E +P+ VTF G L+AC H G V+EG +FE MK Y+
Sbjct: 256 IVGFAANGHAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYR 315
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN-VKMGEWV 415
I PR HYGC+VDL RAG LE+A +VE MPMK N V+ G L+ AC GN ++ E +
Sbjct: 316 ISPRIEHYGCLVDLYSRAGRLEDALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERM 375
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
KHL EL+ S YV+LSN+YA+ G WE ++R MK L K P +S
Sbjct: 376 MKHLSELKVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 425
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/469 (33%), Positives = 254/469 (54%), Gaps = 25/469 (5%)
Query: 15 MKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQ---IY 71
M S + ++ C++ ++ +T+S +D+ V + LS CT N+ I+
Sbjct: 149 MGSWNAMISGYCQSGNAKEALTLSNGLRAMDS-----VTVVSLLSACTEAGDFNRGVTIH 203
Query: 72 AHIIR----THMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
++ I+ + +L F WN+II+ Y E P +A+ ++ M + +
Sbjct: 204 SYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 263
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC-ESGFISLYSKAGDFEKARK 177
PDC TL + QL + R + +R G + + + +Y+K G + AR
Sbjct: 264 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 323
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLG 236
VF+ P + SWN II+G +Q+G A EAI+M+ +++ G + T VSV AC G
Sbjct: 324 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 383
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L +++H + +K+ D ++ SL DMYGKCGR++ A +F++I + N W ++
Sbjct: 384 ALRQGMKLHGRL--LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTL 441
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I + +G +A+ F M + G++P+H+TFV +LSAC H G V EG+ FEMM+ Y
Sbjct: 442 IACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYG 501
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I P HYGCMVD+ GRAG LE A ++ M ++ + IWG L+ AC GNV +G+ +
Sbjct: 502 ITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIAS 561
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+HL E+EP G +V+LSN+YAS G WE V+ IR++ + L K P +S
Sbjct: 562 EHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 610
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 154/324 (47%), Gaps = 30/324 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN +I Y R + + + +FM +G+ PD T P VLKA + G ++H
Sbjct: 51 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 107
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LA++ G + + + I LYS+ AR +FDE P R +GSWNA+I+G Q G AKE
Sbjct: 108 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 167
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ + GL+ D VT+VS+ SAC GD + +H Y +K +S+ L
Sbjct: 168 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSY--SIKHGLESELLR---- 217
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
C KVF + ++ SW S+I Y N A+ F MR S I+P+
Sbjct: 218 -----DC------QKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 266
Query: 326 VTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T + + S G ++ + F + K + + + +V + + GL++ ARA+
Sbjct: 267 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN--AVVVMYAKLGLVDSARAV 324
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+P +V+ W ++ + G
Sbjct: 325 FNWLP-NTDVISWNTIISGYAQNG 347
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 221/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL++++ M R+ P+ +T +L + E GRQ+HS+A+
Sbjct: 159 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAI 218
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y+K+G A VF PER + + AII+G +Q G +EA+
Sbjct: 219 KRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALK 278
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L+ G + VT SV +A L L QVH +V ++S Q S ++LNSLIDM
Sbjct: 279 LFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHV--LRSGQYSYVVLLNSLIDM 336
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y KCG + A ++F + + SW +M+VGY+ +G+A E L+ F MRE ++P+ +T
Sbjct: 337 YSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSIT 396
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
++ VLS C HG G + F+ M+ IEP HYGC+VDLLGRAG +EEA ++
Sbjct: 397 YLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKK 456
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP IWG L+G+C +V++G V + L ELEP + G YV+LSN+YAS G WE++
Sbjct: 457 MPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDM 516
Query: 447 ERIRAVMKHRNLAKIPAYS 465
IR +M+ + + K P S
Sbjct: 517 RNIRDLMQEKAVTKEPGRS 535
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 146/284 (51%), Gaps = 28/284 (9%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
A+ G+++H+ ++ + + + I LY+K AR++FDE P++ + SW A+I+
Sbjct: 105 AIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMIS 164
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC-GSLGDLELALQVHKYVFQVKSK 254
SQ G A EA+++F+ + + EP+ T ++ ++C GSLG E Q+H +K
Sbjct: 165 AYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-FETGRQIHS--IAIKRN 221
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+S + +SL+DMY K GR+ A+ VF + + +V + T++I GYA GL EAL F
Sbjct: 222 YESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFR 281
Query: 315 YMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
++ G+ N VT+ VL+A VH ++ G++ + ++ N
Sbjct: 282 QLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN---------- 331
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G + AR + + MP + + W ++ K G
Sbjct: 332 --SLIDMYSKCGNVCYARRIFDSMPERT-CISWNAMLVGYSKHG 372
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 14/229 (6%)
Query: 197 LSQDGRAKEAI-DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
L G+ KEA+ M I ++ FE D ++ + C S + +VH ++ +K+
Sbjct: 68 LCSSGQLKEALLQMAILGREVKFEGYD----TILNECVSQRAIREGQRVHTHM--IKTCY 121
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ LI +Y KC + A ++F E+ Q NV SWT+MI Y+ G A EAL+ F
Sbjct: 122 LPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVE 181
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRA 374
M S PNH TF +L++C + G+ + +K Y E ++D+ ++
Sbjct: 182 MLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNY--ESHMFVGSSLLDMYAKS 239
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
G + +A + +P + V + G + + + E K ++L+
Sbjct: 240 GRICDAHGVFHCLPERDVVACTAIISG----YAQMGLDEEALKLFRQLQ 284
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 190/303 (62%), Gaps = 2/303 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS + G A +VFD P SW A+I G ++GR EAI+ F + G EPD
Sbjct: 143 ISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDY 202
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+++V SAC +G L L + VH+ V V+ + + + NSLIDMY +CG+++LA +VF
Sbjct: 203 VTLIAVISACAEVGALGLGMWVHRLV--VRQGLERNVRIANSLIDMYARCGQVELARQVF 260
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + V SW SMIVG+AANG +A++ F MR G +P+ VTF GVL+AC HGG
Sbjct: 261 SGMRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGGLTD 320
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG ++++M+ Y I R HYGC+VDLLGR+G LEEA +V MPM+ N V+ G L+
Sbjct: 321 EGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLEEAMRVVTTMPMRPNEVVLGALLAG 380
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C G+V M E + +HL EL+P D YV+LSNIYA+ G W+ ++R++MK R L K P
Sbjct: 381 CRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGLRKRP 440
Query: 463 AYS 465
YS
Sbjct: 441 GYS 443
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +A++ + M GV PD TL V+ A ++ AL +G +H L V
Sbjct: 170 WTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVV 229
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE N + I +Y++ G E AR+VF +R + SWN++I G + +GR +A++
Sbjct: 230 RQGLERNVRIANSLIDMYARCGQVELARQVFSGMRKRTVVSWNSMIVGFAANGRCADAVE 289
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF+PD VT V +AC G + L+ + + + + + ++D+
Sbjct: 290 HFEAMRREGFKPDAVTFTGVLTACSHGGLTDEGLRYYD-LMRAEYGIAARMEHYGCVVDL 348
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNH 325
G+ GR++ A +V + +PN +++ G +G A ++ E G N+
Sbjct: 349 LGRSGRLEEAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANY 408
Query: 326 VTFVGVLSA 334
V + +A
Sbjct: 409 VLLSNIYAA 417
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 36/214 (16%)
Query: 220 PDDVTMVSVTSACG----SLGDLELALQVHKYV----------------FQVKSKQKSDT 259
P+DVT+++V SAC S LAL VH V F S+
Sbjct: 65 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFPSHLLLSTCLVRFYFASRLPHLA 124
Query: 260 LML------------NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
L L N++I + G + A++VF + P+ SWT++I G NG +
Sbjct: 125 LQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHD 184
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGC 366
EA++CF M G+ P++VT + V+SAC G + G + ++ + R A+
Sbjct: 185 EAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIAN--S 242
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ R G +E AR + GM K VV W ++
Sbjct: 243 LIDMYARCGQVELARQVFSGM-RKRTVVSWNSMI 275
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 218/383 (56%), Gaps = 3/383 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ K+ L ++ M+ A + D T+ ++ A L E +
Sbjct: 93 WNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIK 152
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
LE + + + I +Y + G+ ARK+FD P+R + SW ++I G SQ + +A+
Sbjct: 153 ENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVK 212
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + +PD VT+ SV SAC LG L++ VH Y+ + ++D + NSLIDM
Sbjct: 213 LFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIR--RHGVQADIYVGNSLIDM 270
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + + SWTS+I G A NG AN ALD F M G++P H TF
Sbjct: 271 YCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTF 330
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+L AC H G V +G +FE M++V+ + P HYGC+VDLL R+G +++A ++ MP
Sbjct: 331 VGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMP 390
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +VV+W L+ AC+ GNV + E K L EL+P G YV+LSN YA W++ +
Sbjct: 391 IVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMK 450
Query: 449 IRAVMKHRNLAKIPAYSLATRLD 471
+R +M+ ++ K P+ S + +D
Sbjct: 451 MRELMEDSDVQK-PSGSSSIEVD 472
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 158/307 (51%), Gaps = 5/307 (1%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
+V+ + + A I +H A++LG ES F + I +Y+ G A+K+FD +R
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 88
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
L SWN +I G SQ + KE + +F + + D VTMV + AC LGD E A +
Sbjct: 89 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 148
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
KY+ + + + D + N+LIDMYG+ G + A K+F + + +V SWTSMI GY+
Sbjct: 149 KYIKE--NNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQ 206
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
++A+ F M + ++P+ VT VLSAC H GK+ G ++ + ++
Sbjct: 207 FSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR-HGVQADIYVGN 265
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG-ACEKFGNVKMGEWVAKHLQELEP 424
++D+ + G++E+A + M K +V + G A F N + + ++ L+E
Sbjct: 266 SLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSAL-DLFSQMLREGVQ 324
Query: 425 WSDGAYV 431
+ G +V
Sbjct: 325 PTHGTFV 331
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 227/413 (54%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHS 145
W + I L +R + +A + M AG+ P+ T I L ++C F + + LH
Sbjct: 36 WTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITF-ISLLSACGNFPSGSEALSDLLHG 94
Query: 146 LAVRLGLE-SNEFCESGFISLYSKAGDFEKAR---------------------------- 176
A +LGL+ S+ + + +YSK G KAR
Sbjct: 95 YACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQVD 154
Query: 177 ---KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
KVFDE PER L SW A+I G + G +EA+ F ++ G PD V +++ +AC
Sbjct: 155 NAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALAACT 214
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+LG L L H+YV V +++ + NSLID+Y +CG ++ A +VF +++ V SW
Sbjct: 215 NLGALSFGLWAHRYV--VSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTVVSW 272
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+IVG+AANG ANE+L F M+E G +P+ VTF G L+AC H G V+EG +F+MMK
Sbjct: 273 NSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKT 332
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN-VKMG 412
Y+I PR H+GC+VDL RAG LE+A +VE MPMK N V+ G L+ AC GN +
Sbjct: 333 DYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNHGNHTILA 392
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E + KH+ +L+ YV+LSN+YA+ G WE ++R MK L K P YS
Sbjct: 393 ERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 445
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 42/293 (14%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
L ++ + + +++ + SW + I LS+D R EA F ++ G EP+ +T
Sbjct: 11 LTTRKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHIT 70
Query: 225 MVSVTSACGSL--GDLELALQVHKY----------------VFQVKSK------------ 254
+S+ SACG+ G L+ +H Y + + SK
Sbjct: 71 FISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFD 130
Query: 255 --QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
+ +++ N++ID Y + G++D A KVF E+ + ++ SWT+MI G+ G EAL
Sbjct: 131 YMEDKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAW 190
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGCMV 368
F M+ SG+ P++V + L+AC + G + F + + Y + F + ++
Sbjct: 191 FREMQISGVNPDYVAIIAALAACTNLGALS-----FGLWAHRYVVSQDFRNNVRVSNSLI 245
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
DL R G +E AR + + M K VV W ++ GN + +QE
Sbjct: 246 DLYCRCGCVEFARQVFDTME-KRTVVSWNSVIVGFAANGNANESLVYFRKMQE 297
>gi|224141397|ref|XP_002324059.1| predicted protein [Populus trichocarpa]
gi|222867061|gb|EEF04192.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/427 (36%), Positives = 239/427 (55%), Gaps = 14/427 (3%)
Query: 51 AKIVATQLSKCTNLL-QLNQIYAHIIRTHMLHSYSAAFH-------WNNIIRLYTRLEAP 102
A+I+ + L + TNLL +L + + H+ +++S ++ WN +IR Y +AP
Sbjct: 41 AQILVSGLQQDTNLLTELIRFCSLSPSKHLSYAHSLLYNSLDSLPPWNFLIRGYASGDAP 100
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K A+ ++ M + GV P+ +T P VLKA ALE G+Q+H+ + GL+ + + +
Sbjct: 101 KNAIRVFHRMRKEGVGPNNFTFPFVLKACATCLALEEGKQVHADIFKFGLDCDVYVNNNL 160
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ LY A KVFDE P R + SWN++I Q+ +AI F+ +K GFEP++
Sbjct: 161 VHLYGSCKRIWDACKVFDEMPVRSIVSWNSVITACVQNLWLGDAIWNFVKMKDFGFEPNE 220
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
TMV + S C +G+L L +H V ++ + + +L+DMY K G + A VF
Sbjct: 221 TTMVIMLSLCAQIGNLSLGRWIHSQV--IERGMTLNCQLGTALVDMYAKSGDLGYAKLVF 278
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNHVTFVGVLSACVHGGKV 341
+++ NV +W++MI+G A +G E L+ F M+ES I PN+VTF+GVL AC H G V
Sbjct: 279 DRMEKKNVWTWSAMILGLAQHGFGKEGLELFLKMKESVSICPNYVTFLGVLCACSHAGLV 338
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG +F M++ + I P HYG MVD+LGRAG LEEA + +P + + ++W L+
Sbjct: 339 DEGFRYFYEMEHRHGIRPMVIHYGAMVDILGRAGNLEEAYNFLMDVPFQPDPILWRTLLS 398
Query: 402 ACE-KFGNVKMG--EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
AC NV G + V K L ELEP +V+++N+YA G+WE +R M+ L
Sbjct: 399 ACNIHNANVSDGLVDKVRKKLLELEPRRSENFVIIANMYADAGMWETATNVRRTMRDGGL 458
Query: 459 AKIPAYS 465
KI S
Sbjct: 459 KKIGGES 465
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/473 (32%), Positives = 246/473 (52%), Gaps = 66/473 (13%)
Query: 56 TQLSKCTNLLQLNQIYAHIIR----------THMLH--------SYSA----------AF 87
T L C + +L +I+AHI++ T ML Y+ F
Sbjct: 12 TTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVF 71
Query: 88 HWNNIIRLYTRLEAPKKALDIYIF---MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+N IIR YT K L I +F ++ PD +T P V+K+ L +G+Q+H
Sbjct: 72 SYNAIIRTYTH--NHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVH 129
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDF-------------------------------E 173
+ + G +++ E+ I +Y+K GD +
Sbjct: 130 AHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMK 189
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR+VFDE P R + SW +I G ++ G +A+ +F ++ G EPD+++++SV AC
Sbjct: 190 SAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACA 249
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LE+ +HKY KS + + N+L++MY KCG +D A+ +F ++ + +V SW
Sbjct: 250 QLGALEVGKWIHKY--SEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISW 307
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI G A +G A+ F M+++G+ PN VTFVGVLSAC H G EG +F++M+
Sbjct: 308 STMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRV 367
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y +EP+ HYGC+VDLLGR+G +E+A + MPM+ + W L+ +C N+++
Sbjct: 368 DYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAV 427
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L +LEP G YV+L+NIYA WE V +R +++ + + K P SL
Sbjct: 428 VAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRIKKTPGCSL 480
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 213/378 (56%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ Y + P+KA+ ++ M G+ P T+ L A L LE G+ +H
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+L L S+ + IS+YSK + A +F+ R SWNA+I G +Q+GR EA++
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +K G +PD TMVSV A L A +H + ++S + + +L+DM
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI--IRSCLDKNIFVTTALVDM 494
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A K+F I +V +W +MI GY +GL ALD F M++ + PN +T+
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITY 554
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ V+SAC H G V EG F+ MK Y +EP HYG MVDLLGRAG ++EA +E MP
Sbjct: 555 LSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + ++G ++GAC+ N+++GE AK L EL P G +V+L+NIYAS W +V
Sbjct: 615 ISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAE 674
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ + L K P S+
Sbjct: 675 VRKTMEKKGLKKTPGCSV 692
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 166/318 (52%), Gaps = 16/318 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II +++ KKAL++ + M G PD TL VL A+ + L +G+ +H A+
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G + +YSK G E AR +FD ++ + SWN+++ G Q+G ++AI
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G +P VT++ AC LGDLE VHK+V Q+ SD ++NSLI M
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL--NLGSDISVMNSLISM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC R+D+A +F ++ SW +MI+GYA NG +EAL+CF M+ G++P+ T
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 329 VGVLSACVHGGKVQEGKHFFEMM------KNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
V V+ A + K ++ KN++ +VD+ + G + AR
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT-------ALVDMYSKCGAIHMARK 506
Query: 383 MVEGMPMKANVVIWGCLM 400
+ + M +V+ W ++
Sbjct: 507 LFD-MISDRHVITWNAMI 523
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 135/257 (52%), Gaps = 2/257 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
++ +++ Y + + + AL M V P Y +LK L+ G+++H +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+N F +G +++Y+K + A K+FD PER L SWN IIAG SQ+G AK+A++
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + ++ G PD +T+V+V A +G L + +H Y + + + + +L DM
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN--ISTALADM 292
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F +DQ V SW SM+ GY NG +A+ F M E GI P VT
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 329 VGVLSACVHGGKVQEGK 345
+ L AC G ++ GK
Sbjct: 353 MEALHACADLGDLERGK 369
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 228/415 (54%), Gaps = 9/415 (2%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + KC L + + ++ + R A WN II + ++ L +
Sbjct: 421 ANAILDMYGKCKALAEASDLFDMMERRD-------AVSWNAIIAACEQNGNEEETLAHFA 473
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M + + PD +T VLKA AL G ++H+ ++ G+ + F + + +Y K G
Sbjct: 474 SMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCG 533
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
EKA K+ D ++ + SWNAII+G S ++++A F + + G PD+ T +V
Sbjct: 534 MIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLD 593
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C +L + L Q+H + +K + +SD + ++L+DMY KCG M + +F + +
Sbjct: 594 TCANLATVGLGKQIHAQI--IKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDF 651
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W +M+ GYA +GL EAL F M+ ++PNH TFV VL AC H G V +G H+F++
Sbjct: 652 VTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDV 711
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M + Y ++P+ HY CMVD+LGR+G ++EA +V+ MP +A+ VIW L+ C+ GNV+
Sbjct: 712 MLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVE 771
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ E + L +L+P A V+LSNIYA G+W V +R +M+H L K P S
Sbjct: 772 VAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCS 826
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 170/321 (52%), Gaps = 6/321 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + +K++D+++ M R GV D +L +VLKA L ++G Q+H L V
Sbjct: 149 WNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVV 208
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + S + +Y+K + + VF E PE+ SW+A+IAG Q+ R E ++
Sbjct: 209 KFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLE 268
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G S+ +C +L L L ++H + +KS SD ++ + +DM
Sbjct: 269 LFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHA--LKSAFGSDIIVGTATLDM 326
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGRM A KV + + ++ S+ ++IVGYA + +AL F + ++G+ + +T
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITL 386
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
G L+AC EG+ + +K++ A+ ++D+ G+ L EA + + M
Sbjct: 387 SGALNACASIRGDLEGRQVHGLAVKSISMSNICVAN--AILDMYGKCKALAEASDLFDMM 444
Query: 388 PMKANVVIWGCLMGACEKFGN 408
+ + V W ++ ACE+ GN
Sbjct: 445 E-RRDAVSWNAIIAACEQNGN 464
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 152/314 (48%), Gaps = 8/314 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N II Y R + +AL + + + G+ D TL L A + GRQ+H LAV
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ SN + + +Y K +A +FD R SWNAIIA Q+G +E +
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + EPDD T SV AC L +++H + +KS D+ + +L+DM
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRI--IKSGMGFDSFVGAALVDM 528
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A K+ +Q + SW ++I G++ + +A F M E G+ P++ T+
Sbjct: 529 YCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTY 588
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEG 386
VL C + V GK ++ + + E + Y C +VD+ + G +++++ M E
Sbjct: 589 AAVLDTCANLATVGLGK---QIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEK 645
Query: 387 MPMKANVVIWGCLM 400
P + + V W ++
Sbjct: 646 APNR-DFVTWNAML 658
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 122/230 (53%), Gaps = 5/230 (2%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ IS Y+ G+ + ARK F E PER + SWN++I+G Q+G +++ID+F+ + +CG
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
D ++ V ACG+L + ++ +QVH V VK D + ++L+ MY KC R+D +
Sbjct: 179 FDRASLAVVLKACGALEECDMGVQVHGLV--VKFGFDCDVVTGSALLGMYAKCKRLDDSL 236
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF E+ + N SW++MI G N E L+ F M+ G+ + + + +C
Sbjct: 237 SVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALS 296
Query: 340 KVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
++ GK +K+ + + +D+ + G + +A+ ++ MP
Sbjct: 297 ALRLGKELHSHALKSAFGSDIIVGT--ATLDMYAKCGRMADAQKVLSSMP 344
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK-SDTLMLNSLIDMYGKCGR 274
CGFEP T VS L + + Y +V K D + NS+I Y CG
Sbjct: 78 CGFEP--TTFVS-----NCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGE 130
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
MD+A K F+E+ + +V SW S+I G+ NG +++D F M G+ + + VL A
Sbjct: 131 MDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKA 190
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV----DLLG---RAGLLEEARAMVEGM 387
C G ++E +M V+ + +F + C V LLG + L+++ ++ +
Sbjct: 191 C---GALEE----CDMGVQVHGLVVKFG-FDCDVVTGSALLGMYAKCKRLDDSLSVFSEL 242
Query: 388 PMKANVVIWGCLMGAC 403
P K N V W ++ C
Sbjct: 243 PEK-NWVSWSAMIAGC 257
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/437 (35%), Positives = 230/437 (52%), Gaps = 40/437 (9%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++ QI+ +++ +N I+ Y E L I M + G P
Sbjct: 278 KCGDICAARQIFDECANKNLVM-------YNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D T+ + A QL L +G+ H+ +R GLE + + I +Y K G E A KVF
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 180 DENPERKLGSWNAIIAGLSQDGRAK-------------------------------EAID 208
+ P + + +WN++IAGL +DG + EAI+
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIE 450
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G D VTMV + SACG LG L+LA V Y+ K+ D + +L+DM
Sbjct: 451 LFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYI--EKNDIHVDLQLGTALVDM 508
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ +CG A VF +++ +VS+WT+ I A G A++ F+ M E ++P+ V F
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVF 568
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V +L+AC HGG V +G+ F M+ + I P HYGCMVDLLGRAGLLEEA +++ MP
Sbjct: 569 VALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ N V+WG L+ AC K NV++ + A+ L +L P G +V+LSNIYAS G W +V R
Sbjct: 629 IEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVAR 688
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + + K+P S
Sbjct: 689 VRLQMKEKGVQKVPGSS 705
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 198/370 (53%), Gaps = 12/370 (3%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
++ F +N +IR Y +A+ +Y+ M G++PD YT P +L A ++ AL G Q+
Sbjct: 93 ASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQV 152
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H +++GLE + F + I Y++ G + RK+FD ER + SW ++I G S +
Sbjct: 153 HGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLS 212
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEA+ +F + + G EP+ VTMV V SAC L DLEL +V Y+ ++ + T+M+N
Sbjct: 213 KEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISEL--GMELSTIMVN 270
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+DMY KCG + A ++F E N+ + +++ Y + A++ L M + G RP
Sbjct: 271 ALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRP 330
Query: 324 NHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+ VT + ++AC G + GK H + +++N + ++ ++D+ + G E A
Sbjct: 331 DKVTMLSTIAACAQLGDLSVGKSSHAY-VLRNGLEGWDNISN--AIIDMYMKCGKREAAC 387
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL--QELEPWSD--GAYVVLSNIY 437
+ E MP K VV W L+ + G++++ + + ++L W+ GA V +S
Sbjct: 388 KVFEHMPNK-TVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE 446
Query: 438 ASRGLWEEVE 447
+ L+ E++
Sbjct: 447 EAIELFREMQ 456
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 139/287 (48%), Gaps = 15/287 (5%)
Query: 125 PIVLKASCQLF----ALEIGRQLHSLAVRLGLESNEFCES--GFISLYSKAGDFEK---A 175
PI +S +L L+ +QLH ++ GL ++ + I+ + G E A
Sbjct: 22 PITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIGTLESLDYA 81
Query: 176 RKVF--DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
R F D+ L +N +I G + G +AI +++ + G PD T + SAC
Sbjct: 82 RNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACS 141
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+ L +QVH V K + D + NSLI Y +CG++DL K+F + + NV SW
Sbjct: 142 KILALSEGVQVHGAVL--KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSW 199
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
TS+I GY+ L+ EA+ F M E+G+ PN VT V V+SAC ++ GK +
Sbjct: 200 TSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISE 259
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ +E +VD+ + G + AR + + K N+V++ +M
Sbjct: 260 L-GMELSTIMVNALVDMYMKCGDICAARQIFDECANK-NLVMYNTIM 304
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/376 (38%), Positives = 217/376 (57%), Gaps = 2/376 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++A+ + M A VLP+ T+ +VL A + E+G+ + S
Sbjct: 231 WNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVR 290
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I +Y K G+ + AR++FD E+ + SWN +I G S +EA+
Sbjct: 291 DNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALA 350
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + +P+DVT + + AC LG L+L VH Y+ + + S+ + SLIDM
Sbjct: 351 LFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK-NLRNSSNASLWTSLIDM 409
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI-RPNHVT 327
Y KCG ++ A +VF + N++SW +M+ G+A +G A AL F M G+ RP+ +T
Sbjct: 410 YAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDIT 469
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVLSAC G V G +F M Y I P+ HYGCM+DLL RA EEA +++ M
Sbjct: 470 FVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNM 529
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
M+ + IWG L+ AC+ G V+ GE+VA+ L +LEP + GA+V+LSNIYA G W++V
Sbjct: 530 EMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVA 589
Query: 448 RIRAVMKHRNLAKIPA 463
RIR + + + K+P
Sbjct: 590 RIRTRLNDKGMKKVPG 605
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 202/448 (45%), Gaps = 75/448 (16%)
Query: 35 VTISAASS---FLDTHEDPAKIVATQ-----LSKCTNLLQLNQIYAHIIRT--------- 77
VT S + S FL + P KI+ L KC N+ QI++ II+T
Sbjct: 4 VTSSPSPSILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQ 63
Query: 78 ------------------------HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
+ H F WN++IR Y+ +P +L ++ M
Sbjct: 64 SKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRML 123
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD-- 171
GV P+ +T P + K+ + A G+QLH+ A++L L N + I +Y+ G+
Sbjct: 124 YYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMD 183
Query: 172 -----FEK------------------------ARKVFDENPERKLGSWNAIIAGLSQDGR 202
F+K AR++FDE P + + SWNA+I+G Q GR
Sbjct: 184 FARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGR 243
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+EAI F +++ P+ TMV V SACG EL + +V + S+ +
Sbjct: 244 FEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWV--RDNGFGSNLQLT 301
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LIDMY KCG D+A ++F I++ +V SW +MI GY+ L EAL F M S ++
Sbjct: 302 NALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVK 361
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN VTF+G+L AC G + GK + + + + ++D+ + G +E A
Sbjct: 362 PNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAER 421
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ M + N+ W ++ G+ +
Sbjct: 422 VFRSMHSR-NLASWNAMLSGFAMHGHAE 448
>gi|9279581|dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 232/405 (57%), Gaps = 6/405 (1%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T S C L +I+ + + +L W + Y+R +P+ AL +Y+ M +
Sbjct: 182 TLFSVCRRLDLARKIFDDVTDSSLLTEKV----WAAMAIGYSRNGSPRDALIVYVDMLCS 237
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
+ P +++ + LKA L L +GR +H+ V+ + ++ + + LY ++G F+ A
Sbjct: 238 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 297
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKVFD ER + +WN++I+ LS+ R E ++F +++ T+ ++ AC +
Sbjct: 298 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 357
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L ++H + +KSK+K D +LNSL+DMYGKCG ++ + +VF + +++SW
Sbjct: 358 AALLTGKEIHAQI--LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 415
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+ YA NG E ++ F +M ESG+ P+ +TFV +LS C G + G FE MK +
Sbjct: 416 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 475
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
++ P HY C+VD+LGRAG ++EA ++E MP K + IWG L+ +C GNV +GE
Sbjct: 476 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 535
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
AK L LEP + G YV++SNIYA +W+ V++IR +MK R + K
Sbjct: 536 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK 580
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVR-LGLESNEFCESGFISLYSKAGDFEKARK 177
P+ YT +L A +L G ++ SL + L N S I+L+S + ARK
Sbjct: 138 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 195
Query: 178 VFDENPERKLGS---WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+FD+ + L + W A+ G S++G ++A+ +++ + EP + ++ AC
Sbjct: 196 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 255
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L DL + +H + VK K+K D ++ N L+ +Y + G D A KVF + + NV +W
Sbjct: 256 LKDLRVGRGIHAQI--VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 313
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKN 353
S+I + +E + F M+E I + T +L AC + GK +++K+
Sbjct: 314 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 373
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK--- 410
+ +P ++D+ G+ G +E +R + + M K ++ W ++ GN++
Sbjct: 374 --KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIEEVI 430
Query: 411 -MGEWV 415
+ EW+
Sbjct: 431 NLFEWM 436
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 228/412 (55%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + A ++R + F+ W +I +T+ ++A+D++ M
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMR 266
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ D YT VL A + AL+ G+Q+H+ +R + N F S + +Y K +
Sbjct: 267 LENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIK 326
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF + + + SW A++ G Q+G ++EA+ +F ++ G EPDD T+ SV S+C
Sbjct: 327 SAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCA 386
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S S + N+L+ +YGKCG ++ ++++F E+ + SW
Sbjct: 387 NLASLEEGAQFH--CRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSW 444
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+++ GYA G ANE L F M G +P+ VTF+GVLSAC G VQ+G FE M
Sbjct: 445 TALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIK 504
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
++I P HY CM+DL RAG LEEAR + MP + + W L+ +C N+++G+
Sbjct: 505 EHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGK 564
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A+ L +LEP + +Y++LS+IYA++G WEEV +R M+ + L K P S
Sbjct: 565 WAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCS 616
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 165/351 (47%), Gaps = 36/351 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I Y +++ Y M G + L +L + + + +G Q+H
Sbjct: 109 WNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHV 168
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG------------------- 188
V+ G +S F S + +YSK G AR+ FDE PE+ +
Sbjct: 169 VKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSR 228
Query: 189 ------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
SW A+IAG +Q+G +EAID+F ++ E D T SV +ACG +
Sbjct: 229 QLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVM 288
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ QVH Y+ +++ + + + ++L+DMY KC + A VF +++ NV SWT+M
Sbjct: 289 ALQEGKQVHAYI--IRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAM 346
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
+VGY NG + EA+ F M+ +GI P+ T V+S+C + ++EG F V
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQ-FHCRALVSG 405
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ +V L G+ G +E++ + M + V W L+ +FG
Sbjct: 406 LISFITVSNALVTLYGKCGSIEDSHRLFSEMSY-VDEVSWTALVSGYAQFG 455
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 38/281 (13%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-I 211
+ N + + +S YSK + +VF P R + SWN++I+ + G +++ + +
Sbjct: 72 QRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNL 131
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
L F + + + ++ G + L LQVH +V VK +S + + L+DMY K
Sbjct: 132 MLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHV--VKFGFQSYVFVGSPLVDMYSK 189
Query: 272 -------------------------------CGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
C R++ + ++F+++ + + SWT+MI G+
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEP 359
NGL EA+D F MR + + TF VL+AC +QEGK +++ YQ
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ + ++ A + M K NVV W ++
Sbjct: 310 FVG--SALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAML 347
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 102/259 (39%), Gaps = 52/259 (20%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV-------------------- 290
+K+ + + +LN+L+ Y K R+ A +VF ++ Q N+
Sbjct: 36 IKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEME 95
Query: 291 -----------SSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVL-----S 333
SW S+I YA G +++ ++ M +G N + +L
Sbjct: 96 RVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQ 155
Query: 334 ACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
CVH G +Q H F V+ P +VD+ + GL+ AR + MP K
Sbjct: 156 GCVHLG-LQVHGHVVKFGFQSYVFVGSP-------LVDMYSKTGLVFCARQAFDEMPEK- 206
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
NVV++ L+ + ++ + +QE + S A + + GL E +
Sbjct: 207 NVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG---FTQNGLDREAIDLFR 263
Query: 452 VMKHRNLAKIPAYSLATRL 470
M+ NL ++ Y+ + L
Sbjct: 264 EMRLENL-EMDQYTFGSVL 281
>gi|15231831|ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330
gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 232/405 (57%), Gaps = 6/405 (1%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T S C L +I+ + + +L W + Y+R +P+ AL +Y+ M +
Sbjct: 175 TLFSVCRRLDLARKIFDDVTDSSLLTEKV----WAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
+ P +++ + LKA L L +GR +H+ V+ + ++ + + LY ++G F+ A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKVFD ER + +WN++I+ LS+ R E ++F +++ T+ ++ AC +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L ++H + +KSK+K D +LNSL+DMYGKCG ++ + +VF + +++SW
Sbjct: 351 AALLTGKEIHAQI--LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+ YA NG E ++ F +M ESG+ P+ +TFV +LS C G + G FE MK +
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
++ P HY C+VD+LGRAG ++EA ++E MP K + IWG L+ +C GNV +GE
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
AK L LEP + G YV++SNIYA +W+ V++IR +MK R + K
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK 573
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVR-LGLESNEFCESGFISLYSKAGDFEKARK 177
P+ YT +L A +L G ++ SL + L N S I+L+S + ARK
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 178 VFDENPERKLGS---WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+FD+ + L + W A+ G S++G ++A+ +++ + EP + ++ AC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L DL + +H + VK K+K D ++ N L+ +Y + G D A KVF + + NV +W
Sbjct: 249 LKDLRVGRGIHAQI--VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKN 353
S+I + +E + F M+E I + T +L AC + GK +++K+
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK--- 410
+ +P ++D+ G+ G +E +R + + M K ++ W ++ GN++
Sbjct: 367 --KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIEEVI 423
Query: 411 -MGEWV 415
+ EW+
Sbjct: 424 NLFEWM 429
>gi|414591101|tpg|DAA41672.1| TPA: hypothetical protein ZEAMMB73_535355 [Zea mays]
Length = 502
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 228/412 (55%), Gaps = 20/412 (4%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYS---AAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
S+C L + +++ + M H+Y+ AA + ++L +RL A +
Sbjct: 52 SRCGALHRAREVFDGMPSPSM-HAYNVLLAASPPDAAVKLVSRLVA-------------S 97
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G+ PD Y++P VL+A + +G LH AVRLGL +N + +Y+K G A
Sbjct: 98 GLRPDRYSVPAVLRACAESRDALLGSVLHGFAVRLGLLANVVVSGALLDMYAKTGTLGDA 157
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACG 233
+VFDE PER +WN ++ G ++ GR++E +++F ++ G D + SV + C
Sbjct: 158 GRVFDEMPERDAVAWNCMVTGYARAGRSEETLELFRKAQIESAGMARDLRAVPSVLNVCA 217
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
G L ++H + + + SDT++ N+LIDMYGKCG++D A VF +++ NV SW
Sbjct: 218 DEGQLMKGREIHGRMARCLASS-SDTVVGNALIDMYGKCGQVDGAQAVFASMEEKNVVSW 276
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+S+I Y +G+ EAL + M G++PN VTFV +LS+C H G V +G+ FE M+
Sbjct: 277 SSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHSGLVSDGRRIFESMRK 336
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
V+ +EP HY CMVDLLGRAG +EEA +V MPM+ +WG L+ AC NV +GE
Sbjct: 337 VHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMPMEPGASLWGALLSACAIHNNVDVGE 396
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A L ELE + YV L IY + G + V +R+ M+ + K P S
Sbjct: 397 VAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAGLRSRMRELGMVKTPGCS 448
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 12/306 (3%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P L +L+ AL G QLH+ A+ G + ++ + LYS+ G +AR+V
Sbjct: 4 PSSGRLSALLRRCAASGALSPGAQLHAQALVGGRLPDTTLDTDLVLLYSRCGALHRAREV 63
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD P + ++N ++A D A+ + L G PD ++ +V AC D
Sbjct: 64 FDGMPSPSMHAYNVLLAASPPDA----AVKLVSRLVASGLRPDRYSVPAVLRACAESRDA 119
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +H F V+ ++ ++ +L+DMY K G + A +VF E+ + + +W M+
Sbjct: 120 LLGSVLHG--FAVRLGLLANVVVSGALLDMYAKTGTLGDAGRVFDEMPERDAVAWNCMVT 177
Query: 299 GYAANGLANEALDCFH--YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
GYA G + E L+ F + +G+ + VL+ C G++ +G+ M
Sbjct: 178 GYARAGRSEETLELFRKAQIESAGMARDLRAVPSVLNVCADEGQLMKGREIHGRMARCLA 237
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
++D+ G+ G ++ A+A+ M K NVV W L+ +C +G MG+
Sbjct: 238 SSSDTVVGNALIDMYGKCGQVDGAQAVFASMEEK-NVVSWSSLI-SC--YGVHGMGKEAL 293
Query: 417 KHLQEL 422
+ +E+
Sbjct: 294 RVYEEM 299
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 241/445 (54%), Gaps = 23/445 (5%)
Query: 22 LHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH 81
LH C +F V + + LD + +KC LL +I+ +
Sbjct: 232 LHGYCVRRSFDNGVVV--GTGLLDMY-----------AKCQCLLYARKIFD-------VM 271
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIG 140
W+ +I Y + K+AL+++ M + + P TL VL+A +L L G
Sbjct: 272 GVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRG 331
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R+LH ++LG + + +S+Y+K G + A + FD + S++AI++G Q+
Sbjct: 332 RKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQN 391
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A A+ +F ++ G +PD TM+ V AC L L+ H Y+ + +DTL
Sbjct: 392 GNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL--IVRGFATDTL 449
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+LIDMY KCG++ A +VF +D+ ++ SW +MI+GY +GL EAL FH + G
Sbjct: 450 ICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALG 509
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++P+ +TF+ +LS+C H G V EG+ +F+ M + I PR H CMVD+LGRAGL++EA
Sbjct: 510 LKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEA 569
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ MP + +V IW L+ AC N+++GE V+K +Q L P S G +V+LSNIY++
Sbjct: 570 HHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAA 629
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++ IR K L KIP S
Sbjct: 630 GRWDDAAHIRITQKDWGLKKIPGCS 654
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 163/342 (47%), Gaps = 23/342 (6%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN IIR Y A+D+Y M GV P+ YT P VLKA L A+E G ++HS A
Sbjct: 77 WNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAK 136
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLES+ F + + Y+K G +A+++F R + +WNA+IAG S G +A+
Sbjct: 137 MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQ 196
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + +++ G P+ T+V V G L +H Y V+ + ++ L+DM
Sbjct: 197 LIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYC--VRRSFDNGVVVGTGLLDM 254
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVT 327
Y KC + A K+F + N SW++MI GY + EAL+ F M + + P VT
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL---------GRAGLLE 378
VL AC + G+ + Y I+ G ++D+L + G+++
Sbjct: 315 LGSVLRACAKLTDLSRGRKL-----HCYIIK-----LGXVLDILLGNTLLSMYAKCGVID 364
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+A + M K +V + ++ C + GN + + + +Q
Sbjct: 365 DAIRFFDXMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQ 405
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 14/281 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+A Q +L +++H ++ ++ LY AR++FDE P
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN II + +G AID++ + G P+ T V AC L +E +++H
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ +SD + +L+D Y KCG + A ++F + +V +W +MI G + GL
Sbjct: 134 HAKMF--GLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
++A+ M+E GI PN T VGVL + GK + Y + F + G
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKAL-----HGYCVRRSFDN-GV 245
Query: 367 MV-----DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+V D+ + L AR + + M ++ N V W ++G
Sbjct: 246 VVGTGLLDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG 285
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 6/214 (2%)
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC L A ++H++ +K+ +D+ +L+ L +Y C ++ LA ++F EI P+V
Sbjct: 17 ACIQSKSLTEAKKIHQHF--LKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPSV 74
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
W +I YA NG + A+D +H M G+RPN T+ VL AC +++G
Sbjct: 75 ILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSH 134
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
K ++ +E +VD + G+L EA+ + M + +VV W ++ C +G
Sbjct: 135 AK-MFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYGLCD 192
Query: 411 MGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGL 442
+ +QE + P S VL + ++ L
Sbjct: 193 DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKAL 226
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 157/481 (32%), Positives = 260/481 (54%), Gaps = 38/481 (7%)
Query: 12 SLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL----SKCTNLLQL 67
+++ ++ + +L+ FR+ + A + T P+ + T+L +KC +L
Sbjct: 240 NMKFENYNAILNECVNKRAFREGQRVHA--HMIKTRYLPSVFLRTRLIVLYTKCDSLGDA 297
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY---IFMSRAGVL------ 118
+ ++ + +++ W +I Y++ +AL+++ + +S GV
Sbjct: 298 HNVFDEMPERNVVS-------WTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLK 350
Query: 119 ------------PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
P+ +T VL + +GRQ+HSL ++L E + F S + +Y
Sbjct: 351 LSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMY 410
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
+K G +AR VF+ PER + S AII+G +Q G +EA+++F L+ G + + VT
Sbjct: 411 AKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYT 470
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V +A L L+L QVH +V ++S+ S ++ NSLIDMY KCG + + ++F +
Sbjct: 471 GVLTALSGLAALDLGKQVHNHV--LRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ V SW +M+VGY+ +G E L F MRE + ++P+ VT + VLS C HGG +G
Sbjct: 529 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 588
Query: 346 HFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ F +M ++EP+ HYGC+VDLLGR+G +EEA ++ MP + IWG L+GAC
Sbjct: 589 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 648
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
NV +GE+ + L E+EP + G YV+LSN+YAS G WE+V +R +M + + K P
Sbjct: 649 VHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGR 708
Query: 465 S 465
S
Sbjct: 709 S 709
>gi|253761503|ref|XP_002489130.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
gi|241947229|gb|EES20374.1| hypothetical protein SORBIDRAFT_0019s004710 [Sorghum bicolor]
Length = 489
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 218/385 (56%), Gaps = 7/385 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQL-FALEIGRQL 143
+F N +R+ P A + + G L P +T P +LKA+ +L L + QL
Sbjct: 85 SFMLNTTLRVLASSPDPAAAFPFFSRLRVTGALAPGRHTFPFLLKAAARLPLPLPVTEQL 144
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+LAVR G+ + + +G + YS AG + AR+VFDE PER + +++ +Q+GR
Sbjct: 145 HALAVRHGVLLDAYVANGLVRGYSVAGRLQAARRVFDELPERNPAVYTTMVSAYAQNGRH 204
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACG--SLGDLELALQVHKYVFQVKSKQKSDTLM 261
++A+ F + + GFEP T+ SV SAC + G LE+ VH T++
Sbjct: 205 EDAMAAFDEMVRVGFEPCGATLASVLSACARSASGGLEMGCHVHD--LMTAWGVPVSTIL 262
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVS-SWTSMIVGYAANGLANEALDCFHYMRESG 320
+LIDMY K G + A+ V + + +V+ +W ++I G A +G AL+ F M++ G
Sbjct: 263 GTALIDMYVKNGAIKEAFAVLDGLPERHVTGAWNALISGLAHHGHRERALNLFRQMQQEG 322
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ PN T VG LSAC H G + E + F M+ + I P HYGCMVDLLGRAGLL EA
Sbjct: 323 VPPNATTLVGALSACSHPGLLDEARRLFSSMEKDFGITPAIQHYGCMVDLLGRAGLLSEA 382
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
++ GM +A+ VIWG L+ AC+ +++ E A + +L+P + G YVVLSN+YA
Sbjct: 383 EDLIRGMSCEADTVIWGALLTACKNHSGIEIAERAAVEMLKLDPSNHGVYVVLSNLYAEA 442
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V+++R MK L+KIP S
Sbjct: 443 GRWQDVDKLRKEMKGARLSKIPGAS 467
>gi|356565111|ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 223/418 (53%), Gaps = 41/418 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++IR Y R P KA++ Y M + PD +T +L A + ++ G Q+H+ +
Sbjct: 9 WNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQVHATVL 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI--------------- 193
G SN F ++ I+ Y+ G E+AR VFD P+R + SWN++
Sbjct: 69 VKGYCSNVFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARR 128
Query: 194 ----------------IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+AG +++G++++A+ +F +++ E D V +V+ SAC LGD
Sbjct: 129 VFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRRACVELDQVALVAALSACAELGD 188
Query: 238 LELALQVHKYV---FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L+L +H YV F ++ Q+ + N+LI MY CG + AY+VF ++ + + SWT
Sbjct: 189 LKLGRWIHWYVQQRFVARNWQQPSVRLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWT 248
Query: 295 SMIVGYAANGLANEALDCFHYM-----RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
SMI+ +A GL EALD F M + G+RP+ +TF+GVL AC H G V EG F
Sbjct: 249 SMIMAFAKQGLGKEALDLFKTMLSDGVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFA 308
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
MK+ + I P HYGCMVDLL RAGLL+EAR ++E MP+ N IWG L+G C N
Sbjct: 309 SMKHTWGISPSIEHYGCMVDLLSRAGLLDEARGLIETMPLNPNDAIWGALLGGCRIHRNS 368
Query: 410 KMGEWVAKHL-QELEPWSDGAY-VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ V L EL Y V+LSNIYA W++V +R M + K P S
Sbjct: 369 ELASQVENKLVPELNGDQAAGYLVLLSNIYAFGQRWQDVITVRQKMIEMGVKKPPGRS 426
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+D P + W +I GYA + +A++C+ +M S P+ T +LSAC GG V+EG
Sbjct: 1 MDNPTTTVWNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEG 60
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA-- 402
+ + F + GR G +E AR + +GMP ++ VV W ++
Sbjct: 61 EQVHATVLVKGYCSNVFVDTSLITFYAGRGG-VERARHVFDGMPQRS-VVSWNSMLAGYV 118
Query: 403 -CEKFGNVK 410
C F +
Sbjct: 119 RCADFDGAR 127
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 224/390 (57%), Gaps = 11/390 (2%)
Query: 80 LHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
L+S FH WN +I + + P+KAL + M+ +G PD +T+ +L A
Sbjct: 401 LNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLA 460
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
L +L+ G+++H +R GLE++ F + +S Y G AR +FD ++ L SW
Sbjct: 461 CAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSW 520
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
NA+I+G SQ+G E++ +F G + ++ +VSV AC L L L + H YV
Sbjct: 521 NAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV-- 578
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+K+ Q D + S+IDMY K G + + KVF + NV+SW ++IV + +G EA+
Sbjct: 579 LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAI 638
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ + M++ G P+ T++G+L AC H G V+EG +F+ M+N IEP+ HY C++D+
Sbjct: 639 ELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDM 698
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
L RAG L++A +V MP +A+ IW L+ +C FG +++GE VAK L ELEP Y
Sbjct: 699 LARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENY 758
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
V+LSN+YA G W+ V R+R +MK L K
Sbjct: 759 VLLSNLYAGLGKWDGVRRVRQMMKEIGLQK 788
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 162/329 (49%), Gaps = 15/329 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN ++ YTR + +++ +S PD +T P V+KA + + +G +H
Sbjct: 111 IQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHG 170
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ +++GL + F + + +Y K G ++A KVFD PE L SWN++I S++G +++
Sbjct: 171 MVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRD 230
Query: 206 AIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+ D+ + L + G PD VT+V++ C G++++ + +H VK + ++ N+
Sbjct: 231 SFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHG--LAVKLGLSEEVMVNNA 288
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IR 322
++ MY KCG ++ A F + + NV SW +MI ++ G NEA + M+ G ++
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMK 348
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY---GCMVDLLGRAGLLEE 379
N VT + VL AC+ +++ K + Y F H + + G L
Sbjct: 349 ANEVTILNVLPACLDKLQLRSLKEL-----HGYSFRHCFQHVELSNAFILAYAKCGALNS 403
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGN 408
A + G+ K V W L+G + G+
Sbjct: 404 AEKVFHGIGDKT-VSSWNALIGGHAQNGD 431
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 9/317 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I ++ +A ++ M G + + T+ VL A L ++LH
Sbjct: 317 WNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGY 376
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ R + E + FI Y+K G A KVF ++ + SWNA+I G +Q+G ++A
Sbjct: 377 SFRHCFQHVEL-SNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKA 435
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + + G +PD T+ S+ AC L L+ ++H YV +++ ++D + SL+
Sbjct: 436 LHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYV--LRNGLETDFFVGTSLL 493
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y CG+ A +F + N+ SW +MI GY+ NGL E+L F GI+ + +
Sbjct: 494 SHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEI 553
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLLEEARAMVE 385
V V AC ++ GK + Q E F GC ++D+ ++G ++E+R + +
Sbjct: 554 AIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFV--GCSIIDMYAKSGCIKESRKVFD 611
Query: 386 GMPMKANVVIWGCLMGA 402
G+ K NV W ++ A
Sbjct: 612 GLKDK-NVASWNAIIVA 627
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 7/291 (2%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC-ESGFISLYSKAGDFEKARKVFDE 181
+ ++L+A +E GR+LH N++ + I +Y+ G +R VFD
Sbjct: 45 AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDN 104
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ L WNA+++G +++G + + +F+ L F+PD+ T SV ACG + D+ L
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+H V +K D + N+L+ MYGKCG +D A KVF + + N+ SW SMI +
Sbjct: 165 GEVIHGMV--IKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAF 222
Query: 301 AANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+ NG + ++ D M E G+ P+ VT V +L C G+V G + + E
Sbjct: 223 SENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEE 282
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ MV + + G L EA+ M NVV W ++ A G+V
Sbjct: 283 VMVN-NAMVYMYSKCGYLNEAQ-MSFVKNNNKNVVSWNTMISAFSLEGDVN 331
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 245/440 (55%), Gaps = 31/440 (7%)
Query: 47 HEDPAKIVATQLSKCTNLLQL---NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
H+DP +V L C+NL + ++I++H + ++ Y+A + YT
Sbjct: 61 HQDPF-VVFELLRVCSNLNSIGYASKIFSHT-QNPNVYLYTALIDGLVLSCYYT------ 112
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+ +Y M + ++PD Y + VLKA AL+ GR++HS ++LGL SN I
Sbjct: 113 DGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIKLI 172
Query: 164 SLYSKAGDFEKARKVFDENPERKLGS------------------WNAIIAGLSQDGRAKE 205
LY K G FE AR+VFDE PER + + W A+I GL ++G +
Sbjct: 173 ELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGESNR 232
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F +++ P++VT+V V SAC LG L+L V Y+ K + + + + +L
Sbjct: 233 ALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYM--DKHRIELNHFVGGAL 290
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I+MY +CG +D A +VF ++ + NV ++ SMI+G+A +G + EA++ F + + G P+
Sbjct: 291 INMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKSVEAVELFRGLIKQGFTPSS 350
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTFVGVL+AC HGG + G F M Y IEP+ HYGCMVDLLGR G LEEA + +
Sbjct: 351 VTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGCMVDLLGRLGRLEEAYSFIR 410
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M + + V+ G L+ AC+ GN+++ E VAK L + G Y++LSN Y+S G W+E
Sbjct: 411 MMKVAPDHVMLGALLSACKIHGNLELAERVAKSLVACKNADSGTYILLSNAYSSSGKWKE 470
Query: 446 VERIRAVMKHRNLAKIPAYS 465
+R M+ + K P S
Sbjct: 471 AAEVRTNMREEGIEKEPGCS 490
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 101/268 (37%), Gaps = 60/268 (22%)
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
Y +++ D ++ L+ + + A K+F PNV +T++I G +
Sbjct: 52 YAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQNPNVYLYTALIDGLVLSCYY 111
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
+ + ++ M S + P+ VL AC ++EG+ + + R
Sbjct: 112 TDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGREVHSQVLKLGLSSNRSIRIK- 170
Query: 367 MVDLLGRAGLLEEARAMVEGMPMK-----------------ANVVIWG------------ 397
+++L G+ G E+AR + + MP + + V W
Sbjct: 171 LIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGIKDTVCWTAMIDGLVRNGES 230
Query: 398 -----------------------CLMGACEKFGNVKMGEWVA----KHLQELEPWSDGAY 430
C++ AC + G +++G WV KH EL + GA
Sbjct: 231 NRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWVRSYMDKHRIELNHFVGGAL 290
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ N+Y+ G +E +R+ MK +N+
Sbjct: 291 I---NMYSRCGDIDEAQRVFEQMKEKNV 315
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 220/378 (58%), Gaps = 4/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K I+ M P+ TL VL +L LE+G ++ L
Sbjct: 196 WNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLND 255
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L SN + + +Y K G + R VFD R + +W+A+IAG +Q+GR+ EA++
Sbjct: 256 NKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALE 315
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK-SDTLMLNSLID 267
+F +K +P+DVT+VSV SAC LG +E ++ YV +S+ S+ + ++L+
Sbjct: 316 LFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV---ESRGLISNVYVASALLG 372
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A ++F ++ Q + +W SMI+G A NG A +A+ ++ M+E ++PN++T
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 432
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVG+++AC H G V+ G FF M++ + I P H+ C+VDL R+G L +A + M
Sbjct: 433 FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 492
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
++ NVVIWG L+ A NV++ E K L ELEP + G YV+LSNIYAS G W+E
Sbjct: 493 EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEAL 552
Query: 448 RIRAVMKHRNLAKIPAYS 465
++R +MK + + K AYS
Sbjct: 553 KVRKLMKDKRVQKAAAYS 570
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 180/346 (52%), Gaps = 46/346 (13%)
Query: 93 IRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL 152
I Y+RL +AL ++ M + V C+T+P + K+ L A+++G+Q+HSL +R G
Sbjct: 68 ITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRYGF 127
Query: 153 ESNEFCESG-------------------------------FISLYSKAGDFEKARKVFDE 181
S+ FC++ IS YS++G+ AR++FD+
Sbjct: 128 HSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELFDK 187
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
+R + SWNA+I+ +Q+G + +F ++ EP+++T+ +V S C LGDLE+
Sbjct: 188 MRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMG 247
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
L++ K S+ ++ ++++MY KCG +D VF + + +V +W++MI GYA
Sbjct: 248 LRIKK--LNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYA 305
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH---FFE---MMKNVY 355
NG +NEAL+ F M+ + I+PN VT V VLSAC G V+ G+ + E ++ NVY
Sbjct: 306 QNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVY 365
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
Y + G + +AR + + +P + NV +MG
Sbjct: 366 VASALLGMY-------SKCGNIIKARQIFDKLPQRDNVTWNSMIMG 404
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 136/328 (41%), Gaps = 34/328 (10%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
FI A + AR+VFD+ P G + I S+ EA+ F+ + +
Sbjct: 36 FIRRLLNASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIV 95
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYV-----------------FQVKSKQ--------- 255
T+ + +C SL +++ QVH V F K
Sbjct: 96 CFTIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFD 155
Query: 256 ---KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
DT+ N LI Y + G + A ++F ++ ++ SW +MI YA NG ++
Sbjct: 156 GILVKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWII 215
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
F M++ PN +T VLS C G ++ G ++ N + M+++
Sbjct: 216 FQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDN-KNLGSNMIVSTAMLEMYV 274
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ--ELEPWSDGAY 430
+ G +++ R + + M + +VV W ++ + G + ++++ +++P +D
Sbjct: 275 KCGAVDDGRLVFDHMA-RRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKP-NDVTL 332
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNL 458
V + + A G E ERI + ++ R L
Sbjct: 333 VSVLSACAQLGSVETGERIGSYVESRGL 360
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T L +C +++ Q++ ++ + W II T+ K+A+D + M
Sbjct: 212 TGLLRCRFIVEAEQLFDNMPEKD-------SISWTTIITGLTQNGLFKEAVDKFKEMGIE 264
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G D +T VL A AL+ G+Q+H+ +R + N F S + +Y K + + A
Sbjct: 265 GFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYA 324
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
VF + + + SW A++ G Q+G ++EA+ +F +++ PDD T+ SV S+C +L
Sbjct: 325 EAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANL 384
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
LE Q H + S + N+LI +YGKCG ++ A+++F E+ + SWT+
Sbjct: 385 ASLEEGAQFHGQA--LASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTA 442
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
++ GYA G ANE + F M GI P+ VTFVGVLSAC G V++G H+FE M +
Sbjct: 443 LVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEH 502
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+I P HY CM+DLL RAG LEEA+ + MP + + W L+ +C GN+++G+W
Sbjct: 503 RITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWA 562
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L +LEP + +Y++LS+IYA++G W++V ++R M+ + K P +S
Sbjct: 563 AESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHS 612
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 58/362 (16%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+++ Y +++ +Y M + G V + T +L S +++GRQ+H
Sbjct: 105 WNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQI 164
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG------------------- 188
+ G +S F S + +Y+K G A ++F+E PE+ +
Sbjct: 165 FKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAE 224
Query: 189 ------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
SW II GL+Q+G KEA+D F + GF D T SV +ACG
Sbjct: 225 QLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFL 284
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ Q+H Y+ +++ + + + ++L+DMY KC + A VF ++ NV SWT+M
Sbjct: 285 ALDEGKQIHAYI--IRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF--------- 347
+VGY NG + EA+ F M+ + I P+ T V+S+C + ++EG F
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402
Query: 348 --FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F + N ++ L G+ G LE A + M ++ + V W L+ +
Sbjct: 403 ICFVTVSNA------------LITLYGKCGSLEHAHQLFHEMKIR-DEVSWTALVSGYAQ 449
Query: 406 FG 407
FG
Sbjct: 450 FG 451
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 69/337 (20%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE--- 184
LK C+ ++LH +R F + I+ Y K GD + AR VFD P+
Sbjct: 12 LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL 71
Query: 185 ----------RKLG------------------SWNAIIAGLSQDGRAKEAIDMF-IGLKK 215
KLG SWN++++G + +G E++ ++ + LK
Sbjct: 72 FSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD 131
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
+ +T ++ + G ++L Q+H +F K +S + + L+DMY K G +
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIF--KFGYQSYLFVGSPLVDMYAKTGFI 189
Query: 276 DLAYKVFWEIDQPNVS-------------------------------SWTSMIVGYAANG 304
+ A ++F EI + N+ SWT++I G NG
Sbjct: 190 NDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG 249
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAH 363
L EA+D F M G + TF VL+AC + EGK +++ YQ
Sbjct: 250 LFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG- 308
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + ++ A A+ M K NV+ W ++
Sbjct: 309 -SALLDMYCKCRNVKYAEAVFRKMRHK-NVISWTAML 343
>gi|298205169|emb|CBI17228.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 219/384 (57%), Gaps = 33/384 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N +IR + ++ ++ M R + PD TLP VLK+ L + +GR LH
Sbjct: 104 FVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGG 163
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++LGLE + F + +Y K G+ ++FDE+P+R E+
Sbjct: 164 VMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN----------------KAES 207
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN--- 263
I ++ G++ P+D+T+VS AC +G L++ ++H Y+ S+ LN
Sbjct: 208 ILLWNGVR-----PNDLTVVSALLACTKIGALQVGERIHNYL-------SSNGFQLNRGI 255
Query: 264 --SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+L+DMY KCG + A +VF E ++ +W+ MI G+A +G ++AL CF M+ +GI
Sbjct: 256 GTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGI 315
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P+ V F+ +L+AC H G V +G +FFE M+ Y IEP HY +VDLLGRAG L+EA
Sbjct: 316 NPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEAL 375
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+ ++ MP+ + VIWG L AC N++M E A+ L +LEP G+YV LSN+YA+ G
Sbjct: 376 SFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVG 435
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
WE+VER+R +MK+R + K P +S
Sbjct: 436 RWEDVERVRTLMKNRGVEKDPGWS 459
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ + +P++ AS L L Q+H+ L SN + IS + A +
Sbjct: 39 PETHFIPLI-HASNTLPQLH---QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSI 94
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F L +NA+I GL+++ R + ++ F+ + + PD +T+ V + +L D+
Sbjct: 95 FRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDV 154
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +H V +K + D+ + SL+DMY K G + ++F E Q N +
Sbjct: 155 GLGRCLHGGV--MKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAE------ 206
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-KNVYQI 357
+ +G+RPN +T V L AC G +Q G+ + N +Q+
Sbjct: 207 ---------------SILLWNGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQL 251
Query: 358 EPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMP---MKANVVIWGCLMGAC 403
+VD+ + G ++ A R VE + +V+IWG + C
Sbjct: 252 NRGIG--TALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGC 299
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 210/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + E + ++++ M V PD TL ++L + +L L++G Q+HS +V
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV 443
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L ++ F SG + +YSK G AR +F+ ER + WN++I+GL+ +EA D
Sbjct: 444 RFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFD 503
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ G P + + S+ ++C L + Q+H + VK + + ++LIDM
Sbjct: 504 FFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQI--VKDGYDQNVYVGSALIDM 561
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A F + N+ +W MI GYA NG +A+D F YM + RP+ VTF
Sbjct: 562 YAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTF 621
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+ C H G V E FF M++ Y I P HY C++D LGRAG L E A+++ MP
Sbjct: 622 IAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMP 681
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K + ++W L+ AC N ++GE AKHL L+P + YV+LSNIYAS G +
Sbjct: 682 CKDDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASG 741
Query: 449 IRAVMKHRNLAKIPAYS 465
+RA+M R + K YS
Sbjct: 742 VRALMSSRGVVKGRGYS 758
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 145/269 (53%), Gaps = 10/269 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I R E +AL++Y M R G++P +TL VL A + AL+ GR+ H LAV
Sbjct: 108 WNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAV 167
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+ N F E+ + +Y+K G E A ++FD S+ A++ GL Q G +A+
Sbjct: 168 KVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALR 227
Query: 209 MFIGLKKCGFEPDDVTMVSV----TSACGSLGDLELALQVHK--YVFQVKSKQKSDTLML 262
+F + + G D V + SV AC S D+ A ++ + + V+ SD +
Sbjct: 228 LFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVG 287
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVS--SWTSMIVGYAANGLANEALDCFHYMRESG 320
NSLIDMY KC +MD A KVF + PN+S SW +I G+ G +AL+ + M ESG
Sbjct: 288 NSLIDMYTKCMQMDEAVKVFDSL--PNISTVSWNILITGFGQAGSYAKALEVLNLMEESG 345
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
PN VT+ +L++C+ V + F+
Sbjct: 346 SEPNEVTYSNMLASCIKARDVLSARAMFD 374
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 155/310 (50%), Gaps = 14/310 (4%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP--IVLKASCQLFALEIGRQLHSLA 147
N++I +YT+ +A+ ++ LP+ T+ I++ Q + ++ +L
Sbjct: 288 NSLIDMYTKCMQMDEAVKVF------DSLPNISTVSWNILITGFGQAGSYAKALEVLNLM 341
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G E NE S ++ KA D AR +FD+ + +WN +++G Q+ ++ +
Sbjct: 342 EESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTV 401
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F ++ +PD T+ + S+C LG L+L QVH V+ +D + + L+D
Sbjct: 402 ELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSA--SVRFLLHNDMFVASGLVD 459
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG++ +A +F + + +V W SMI G A + L EA D F MR +G+ P +
Sbjct: 460 MYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESS 519
Query: 328 FVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ ++++C V +G+ +++K+ Y ++D+ + G +++AR +
Sbjct: 520 YASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVG--SALIDMYAKCGNMDDARVFFDC 577
Query: 387 MPMKANVVIW 396
M K N+V W
Sbjct: 578 MVTK-NIVAW 586
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 20/296 (6%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N + + +S +AGD + AR + DE P+R + SWN +IA L++ RA EA++++ G+
Sbjct: 73 NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ G P T+ SV SACG++ L+ + H VK + + N+L+ MY KCG
Sbjct: 133 REGLVPTHFTLASVLSACGAVAALDDGRRCHG--LAVKVGLDENLFVENALLGMYTKCGG 190
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
++ A ++F + PN S+T+M+ G G ++AL F M SG+R + V VL +
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS 250
Query: 335 CVHGGKVQ-EGKHFFEMMKNVYQIEPRFA-----HYG-CMVDLLGRAGLLEEARAMVEGM 387
C + + F + + ++ + R H G ++D+ + ++EA + + +
Sbjct: 251 CAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL 310
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL----EPWSDGAYVVLSNIYAS 439
P + V W L+ FG + G + AK L+ L E S+ V SN+ AS
Sbjct: 311 P-NISTVSWNILI---TGFG--QAGSY-AKALEVLNLMEESGSEPNEVTYSNMLAS 359
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
+S + + N+ + + G +D A + E+ NV SW ++I A + A EAL+
Sbjct: 67 RSLPRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALE 126
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
+ M G+ P H T VLSAC + +G+ + V E F ++ +
Sbjct: 127 LYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVE-NALLGMY 185
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ G +E+A + +GM N V + +MG + G+V
Sbjct: 186 TKCGGVEDAVRLFDGMA-SPNEVSFTAMMGGLVQAGSV 222
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 228/384 (59%), Gaps = 20/384 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ----LFALEIGRQLH 144
WN ++ Y + ++AL ++ M AG+ PD T V+ A A + R LH
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
++L N F + + +Y+K GD + ARK+F+ P R + +WN++IAG +Q+G++
Sbjct: 288 QKRIQL----NCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSA 343
Query: 205 EAIDMF---IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
AI++F I KK PD+VTMVSV SACG LG LEL V + F +++ K
Sbjct: 344 MAIELFKEMITAKK--LTPDEVTMVSVISACGHLGALELGNWVVR--FLTENQIKLSISG 399
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N++I MY +CG M+ A +VF E+ +V S+ ++I G+AA+G EA++ M+E GI
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGI 459
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P+ VTF+GVL+AC H G ++EG+ FE +K +P HY CMVDLLGR G LE+A+
Sbjct: 460 EPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DPAIDHYACMVDLLGRVGELEDAK 514
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+E MPM+ + ++G L+ A V++GE A L ELEP + G +++LSNIYAS G
Sbjct: 515 RTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAG 574
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W++VERIR MK + K +S
Sbjct: 575 RWKDVERIREAMKKGGVKKTTGWS 598
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 5/257 (1%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E N + ++ Y+K D E AR+ FD PER + SWNA+++G +Q+G A+EA+ +F
Sbjct: 191 ERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDE 250
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ G EPD+ T V+V SAC S GD LA + + + Q + + + + +L+DMY K
Sbjct: 251 MVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQ--KRIQLNCFVRTALLDMYAKF 308
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGV 331
G +D A K+F + NV +W SMI GYA NG + A++ F M + P+ VT V V
Sbjct: 309 GDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+SAC H G ++ G + QI+ + + M+ + R G +E+A+ + + M +
Sbjct: 369 ISACGHLGALELGNWVVRFLTE-NQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR- 426
Query: 392 NVVIWGCLMGACEKFGN 408
+VV + L+ G+
Sbjct: 427 DVVSYNTLISGFAAHGH 443
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 192/449 (42%), Gaps = 100/449 (22%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
VA ++ CT L + Y H++ L+ F + +++R Y+ L+ K + +Y M
Sbjct: 36 VALLINHCTRL-RAPPHYTHLLFNSTLNP--NVFVFTSMLRFYSHLQDHAKVVLMYEQMQ 92
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
GV PD + PI++K+ A G H+ ++LG S+ F + I +Y++ G
Sbjct: 93 GCGVRPDAFVYPILIKS-----AGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIG 147
Query: 174 KARKVFDENP--ERKLGSWNAIIAGL---SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
ARKVFDE P ERK+ WNA+++G +G+A
Sbjct: 148 HARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA------------------------- 182
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
+++F V ++ + + +++ Y K ++ A + F + +
Sbjct: 183 -----------------QWLFDVMPER--NVITWTAMVTGYAKVKDLEAARRYFDCMPER 223
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V SW +M+ GYA NGLA EAL F M +GI P+ T+V V+SAC G
Sbjct: 224 SVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAA--- 280
Query: 349 EMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG----- 401
+++ ++Q + + ++D+ + G L+ AR + MP + NVV W ++
Sbjct: 281 SLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGR-NVVTWNSMIAGYAQN 339
Query: 402 -------------------------------ACEKFGNVKMGEWVAKHLQELE-PWSDGA 429
AC G +++G WV + L E + S
Sbjct: 340 GQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG 399
Query: 430 YVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ + +Y+ G E+ +R+ M R++
Sbjct: 400 HNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 214/409 (52%), Gaps = 34/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I LY P KA I+ + +G+ PD + + + A L GR +H +
Sbjct: 71 WTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVF 130
Query: 149 RLGLESNEFCESGFISLYSKAG-------------------------------DFEKARK 177
R L S+ + I +YS++G D E AR+
Sbjct: 131 RFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARR 190
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLG 236
+FDE P R SW A+I G Q +++F ++ G + P +T+V+V S C +G
Sbjct: 191 IFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIG 250
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+L VH YV K+ D + N+L+DMY K G + LA K+F E+ + +V SWT+M
Sbjct: 251 AFDLGSSVHGYVN--KTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTM 308
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G AL+ F M +SG+ PN VT + VLSAC H G V EG+ F+ M +
Sbjct: 309 ISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHG 368
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I+P+ HYGCMVDLLGRAGLL EA+ ++E MP+K + VIW L+ AC GN+ + E
Sbjct: 369 IKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAG 428
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
K + ELEP DG Y++L NIY S WE+ + R M+ R + K P S
Sbjct: 429 KMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 477
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 126/299 (42%), Gaps = 38/299 (12%)
Query: 136 ALEIGRQLHSLAVRLGL--ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+LE +Q+H AV LGL + ++ Y++ G A+KVF+ + SW +
Sbjct: 15 SLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCL 74
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I+ + +A +F L G PD +V SACG DL VH VF+
Sbjct: 75 ISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRF-- 132
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS------------------ 295
+ SD ++ N+LIDMY + G +++A VF ++ +VSSWTS
Sbjct: 133 ELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIF 192
Query: 296 -------------MIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACVHGGKV 341
MI GY + L+ F MR G P +T V VLS C G
Sbjct: 193 DEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAF 252
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
G + N ++ ++D+ ++G L A + + MP K +V W ++
Sbjct: 253 DLGSSVHGYV-NKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP-KRDVFSWTTMI 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 5/179 (2%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
CGSL L+ Q+H + + L++ Y + G A KVF I P++
Sbjct: 13 CGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIV 69
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SWT +I Y +A F ++ SG+RP+ VG +SAC H + G+ M+
Sbjct: 70 SWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMV 129
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+++ ++D+ R+G +E A ++ + M +K +V W L+ K +++
Sbjct: 130 FR-FELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCNDIE 186
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 234/424 (55%), Gaps = 11/424 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
L H+ + T S + L +++ I R ++ WN +++ Y R
Sbjct: 147 LQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVS-------WNAMMKAYERAGMAA 199
Query: 104 KALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++ M G V P+ T+ +VL A L +GR L +E S
Sbjct: 200 DVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSAL 259
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y K G+ +AR+VFD + + +WNA+I G +Q+G +KEAI +F +++ G PD
Sbjct: 260 VGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDK 319
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T+V V SAC ++G LEL ++ Y + + +L+DMY KCG +D A +VF
Sbjct: 320 ITLVGVLSACAAVGALELGTELDAYASH--RGLYGNVYVGTALVDMYSKCGDLDKAVQVF 377
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKV 341
++ N ++W ++I G A NG +EA+ F MR E G+RP+ +TF+GVLSACVH G +
Sbjct: 378 GKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLL 437
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
++G+ +F + + +QI P+ HY CMVDLL RAG LEEA VE +P KA+ V+ G L+
Sbjct: 438 KDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLA 497
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC K NV++ E V + +LEP + YVV S IYAS ++ ++R +M+ R ++KI
Sbjct: 498 ACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKI 557
Query: 462 PAYS 465
P S
Sbjct: 558 PGCS 561
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 172/330 (52%), Gaps = 24/330 (7%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H AF +N +R + P+ AL +++ M RA + PD YTLP +L A+ +
Sbjct: 77 HPAPTAFSYNVTLRFFASTR-PRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFA 135
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R H+L RLGL++++ +++YS GD AR+VFD P R + SWNA++ +
Sbjct: 136 RSAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERA 195
Query: 201 GRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G A + MF + G P++VT+ V +AC GDL L + ++V + + S
Sbjct: 196 GMAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGS-- 253
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L+ ++L+ MY KCG M A +VF I +V +W +MI GYA NG++ EA+ FH MR+
Sbjct: 254 LVGSALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQE 313
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG---------CMVDL 370
G P+ +T VGVLSAC G ++ G +++ +H G +VD+
Sbjct: 314 GASPDKITLVGVLSACAAVGALELGT----------ELDAYASHRGLYGNVYVGTALVDM 363
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G L++A + +P K N W L+
Sbjct: 364 YSKCGDLDKAVQVFGKLPCK-NEATWNALI 392
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 220/381 (57%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI----VLKASCQLFALEIGRQLH 144
W+ +I + +A ++ M G+ C+ P L+A L L +G QLH
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLH 248
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG ++A +FDE + S++A+++G Q+GRA+
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + S+T + N+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV--IIRGLASETSICNA 366
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCGR+DL+ +VF + ++ SW +MI GY +GL EA F M G P+
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +LSAC H G V EGKH+F +M + Y + PR HY CMVDLL R G L+EA +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++A+V +W L+GAC + N+ +G+ V++ +QEL P G +V+LSNIY++ G ++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P S
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCS 567
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 17/334 (5%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R V P+ YT P LKA L GR +H A+ GL+++ F + + +Y K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC--GFEPDDVTMVSVT 229
A +F P R L +WNA++AG + G A+ + ++ P+ T+V++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 230 SACGSLGDLELALQVHKYVFQV--------KSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
G L VH Y + KSK L+ +L+DMY KCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACVHG 338
F + N +W+++I G+ +A F M G + P + L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 238
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
++ G+ ++ + ++ + +AGL+++A A+ + M +K + V +
Sbjct: 239 DHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSA 296
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
L+ + G + V K +Q D A +V
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMV 330
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y KA ++ M GV D +T ++ + L + +G+Q+H L +
Sbjct: 247 WNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RL + + S + +YSK + E ARK FD + + SW +I G Q G KEA+
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMR 366
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + + PD++ + S+ S+CG+L +QVH YV V++ ++ + N+L+
Sbjct: 367 LLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYV--VENGFEAFLSIANALVSA 424
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A++ F + +P++ SWTS++ YA +GL+ E ++ F M S +RP+ V F
Sbjct: 425 YSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAF 484
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC HGG V EG H+F +M NVYQI P HY C++DLLGRAG L+EA ++ MP
Sbjct: 485 LGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMP 544
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ G +GAC+ NV + W ++ L +EP Y ++SN+YAS G W +V R
Sbjct: 545 VEPRSDTLGAFLGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVAR 604
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ R K+P S
Sbjct: 605 VRKLMRERCDFKVPGCS 621
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 187/416 (44%), Gaps = 49/416 (11%)
Query: 26 CKTHTFRKH-VTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYS 84
C TH+F H + ISA FL + V +L C NLL L + +LH Y
Sbjct: 70 CSTHSFSSHALKISAKLGFLHGGKQLHAHV-IKLGNC-NLLSL--------QNQVLHVYV 119
Query: 85 AAFHWNNIIRLYTRLEAPKKAL-------------DIYIFMSRAG-----------VLPD 120
+N++ +++ E P K + + + R G + P+
Sbjct: 120 KCKEFNDVCKMFD--EMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPN 177
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
C TL +L+AS +L + I RQLH ++ G +SN F S + Y+K G ++A+ FD
Sbjct: 178 CITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD 237
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
E R L WN +++ + +G +A +F ++ G + D+ T S+ ++CG LG L
Sbjct: 238 EVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGL 297
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
QVH + ++ D L+ ++L+DMY K ++ A K F + N+ SWT+MIVGY
Sbjct: 298 GKQVHGLIIRLSFDL--DVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGY 355
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+G EA+ M P+ + +LS+C G + ++ + Y +E
Sbjct: 356 GQHGDGKEAMRLLQEMIRVYTYPDELALASILSSC---GNLSATSEVVQV--HAYVVENG 410
Query: 361 FAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
F + +V + G + A + + +++ W LMGA G K G
Sbjct: 411 FEAFLSIANALVSAYSKCGSIGSAFQSFSSVA-EPDIISWTSLMGAYAFHGLSKEG 465
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 220/381 (57%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI----VLKASCQLFALEIGRQLH 144
W+ +I + +A ++ M G+ C+ P L+A L L +G QLH
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLH 363
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG ++A +FDE + S++A+++G Q+GRA+
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + S+T + N+
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV--IIRGLASETSICNA 481
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCGR+DL+ +VF + ++ SW +MI GY +GL EA F M G P+
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +LSAC H G V EGKH+F +M + Y + PR HY CMVDLL R G L+EA +
Sbjct: 542 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++A+V +W L+GAC + N+ +G+ V++ +QEL P G +V+LSNIY++ G ++
Sbjct: 602 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P S
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCS 682
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 34/396 (8%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALD---IY 109
I + LS+ +L +QI + +RT +N++IR Y+ +P A D +Y
Sbjct: 68 IASGHLSRAHHLF--DQIPSPDVRT-----------YNDLIRAYSS-SSPTAAADGLHLY 113
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M R V P+ YT P LKA L GR +H A+ GL+++ F + + +Y K
Sbjct: 114 RRMLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKC 173
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC--GFEPDDVTMVS 227
A +F P R L +WNA++AG + G A+ + ++ P+ T+V+
Sbjct: 174 ACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 233
Query: 228 VTSACGSLGDLELALQVHKYVFQV--------KSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
+ G L VH Y + KSK L+ +L+DMY KCG + A
Sbjct: 234 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYAR 293
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACV 336
+VF + N +W+++I G+ +A F M G + P + L AC
Sbjct: 294 RVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACA 351
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G+ ++ + ++ + +AGL+++A A+ + M +K + V +
Sbjct: 352 SLDHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSY 409
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
L+ + G + V K +Q D A +V
Sbjct: 410 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMV 445
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 212/365 (58%), Gaps = 6/365 (1%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A+ +Y M +LPD Y + +LKA AL GR++HS A++LGL SN +
Sbjct: 114 AIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIME 173
Query: 165 LYSKAGDFEKARKVFDENPERKLGS----WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
LY K G+ AR+VF+E PE + W A+I G ++ A++ F G++ P
Sbjct: 174 LYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 233
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
++ T+V V SAC LG LE+ VH Y+ K + + + + N+LI+MY +CG +D A
Sbjct: 234 NEFTIVCVLSACSQLGALEIGRWVHSYM--RKFEIELNLFVGNALINMYSRCGSIDEAQT 291
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
VF E+ +V ++ +MI G + NG + +A++ F M +RP +VTFVGVL+AC HGG
Sbjct: 292 VFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGL 351
Query: 341 VQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
V G F M Y +EP+ HYGCMVDLLGR G LEEA ++ M M + ++ G L+
Sbjct: 352 VDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLL 411
Query: 401 GACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
AC+ N+++GE VAK L++ G YV+LS++YAS G W+E ++RA MK + K
Sbjct: 412 SACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQK 471
Query: 461 IPAYS 465
P S
Sbjct: 472 EPGCS 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 7/197 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R E +AL+ + M V P+ +T+ VL A QL ALEIGR +HS
Sbjct: 203 WTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N F + I++YS+ G ++A+ VFDE +R + ++N +I+GLS +G++++AI+
Sbjct: 263 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 322
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSL 265
+F + P +VT V V +AC G ++ + +F ++ + +
Sbjct: 323 LFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFK----IFHSMTRDYGVEPQIEHYGCM 378
Query: 266 IDMYGKCGRMDLAYKVF 282
+D+ G+ GR++ AY +
Sbjct: 379 VDLLGRVGRLEEAYDLI 395
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 8/264 (3%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ +R G + F + SK + A ++F + + A+I G G
Sbjct: 51 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 110
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+AI ++ + PD+ M S+ ACGS L +VH +K S+ L+
Sbjct: 111 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRA--LKLGLSSNRLVR 168
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSS----WTSMIVGYAANGLANEALDCFHYMRE 318
++++YGKCG + A +VF E+ + V+ WT+MI G+ N N AL+ F M+
Sbjct: 169 LRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQG 228
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+RPN T V VLSAC G ++ G+ M+ ++IE ++++ R G ++
Sbjct: 229 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRK-FEIELNLFVGNALINMYSRCGSID 287
Query: 379 EARAMVEGMPMKANVVIWGCLMGA 402
EA+ + + M + +V+ + ++
Sbjct: 288 EAQTVFDEMKDR-DVITYNTMISG 310
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 213/377 (56%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y P+KAL+ Y M G++PD T+ IVL A L L++G LH +A
Sbjct: 377 WTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAK 436
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL S + I +Y+K +KA ++F E+ + SW +II GL + R EA+
Sbjct: 437 QKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALF 496
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + + +P+ VT+V V SAC +G L ++H + +++ D M N+++DM
Sbjct: 497 FFREMIR-RLKPNSVTLVCVLSACARIGALTCGKEIHAHA--LRTGVSFDGFMPNAILDM 553
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGRM+ A+K F+ +D V+SW ++ GYA G A + F M ES + PN VTF
Sbjct: 554 YVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTF 612
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC G V EG +F MK Y I P HY C+VDLLGR+G LEEA ++ MP
Sbjct: 613 ISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMP 672
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK + +WG L+ +C +V++GE A+++ + + S G Y++LSN+YA G W++V
Sbjct: 673 MKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAE 732
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ L P S
Sbjct: 733 VRKMMRQNGLIVDPGCS 749
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 4/314 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + +ALD+Y M GV PD YT P VL+ + L GR++H
Sbjct: 173 FSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVH 232
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+R G ES+ + I++Y K GD AR VFD+ P R SWNA+I+G ++G E
Sbjct: 233 VIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEG 292
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + K +PD +TM SV +AC LGD L Q+H YV ++++ D + NSLI
Sbjct: 293 LRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYV--LRTEFGRDPSIHNSLI 350
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY G ++ A VF + ++ SWT+MI GY + +AL+ + M GI P+ +
Sbjct: 351 PMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEI 410
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T VLSAC + G + E+ K + ++D+ + +++A +
Sbjct: 411 TIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVA-NSLIDMYAKCKCIDKALEIFHS 469
Query: 387 MPMKANVVIWGCLM 400
++ N+V W ++
Sbjct: 470 T-LEKNIVSWTSII 482
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 6/247 (2%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ +S++ + G+ A VF +R L SWN ++ G ++ G EA+D++ + G +
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T V CG + +L ++H +V ++ +SD ++N+LI MY KCG ++ A
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHV--IRYGFESDVDVVNALITMYVKCGDVNTAR 262
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF ++ + SW +MI GY NG+ E L F M + + P+ +T V++AC G
Sbjct: 263 LVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLG 322
Query: 340 KVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
+ G+ +++ + +P + ++ + GL+EEA + + ++V W
Sbjct: 323 DDRLGRQIHGYVLRTEFGRDPSI--HNSLIPMYSSVGLIEEAETVFSRTECR-DLVSWTA 379
Query: 399 LMGACEK 405
++ E
Sbjct: 380 MISGYEN 386
>gi|449527613|ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like, partial [Cucumis sativus]
Length = 315
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 192/293 (65%), Gaps = 1/293 (0%)
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
KARK+FDE P++ + +WNA+IAG KEA++MF ++ G PDDVTM+S+ SA
Sbjct: 1 KARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASA 60
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LGDLE+ ++H+ +F + S L+ N+LIDMY KCG + A +VF + + + SSW
Sbjct: 61 DLGDLEIGKKIHRSIFDMCCGDLS-VLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSW 119
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+I G A +G A E+++ F M ++PN +TFV VL AC H GKV+EG+ +F +MKN
Sbjct: 120 NSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKN 179
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
V++IEP HYGCMVD+LGRAGLL EA ++ M ++ N +IW L+GAC G+V++G
Sbjct: 180 VFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGR 239
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L ++ G YV+LSNIYAS+G W+ V+++R +M + K +SL
Sbjct: 240 RANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSL 292
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 36/264 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH-SLA 147
WN +I Y K+AL+++ M G PD T+ +L AS L LEIG+++H S+
Sbjct: 17 WNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHRSIF 76
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + + I +Y+K G A +VF ++ SWN+II GL+ G A+E+I
Sbjct: 77 DMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAEESI 136
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + + +P+++T V+V AC G +V+ + LM N
Sbjct: 137 NLFQEMLRLKMKPNEITFVAVLVACSHAG-------------KVREGRMYFNLMKN---- 179
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+K+ +PN+ + M+ GL EA D M I PN +
Sbjct: 180 ----------VFKI-----EPNIKHYGCMVDILGRAGLLIEAFDFIDTME---IEPNAII 221
Query: 328 FVGVLSACVHGGKVQEGKHFFEMM 351
+ +L AC G V+ G+ E +
Sbjct: 222 WRTLLGACRVHGDVELGRRANEQL 245
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 230/413 (55%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHS 145
W + I L +R +A+ + M AG+ P+ T I L ++C F + +G LH
Sbjct: 24 WTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITF-IALLSACGNFPSGSEGLGYLLHG 82
Query: 146 LAVRLGLE-SNEFCESGFISLYSKAGDFEKAR---------------------------- 176
A +LGLE S+ + + +YSK+G KAR
Sbjct: 83 YACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQVD 142
Query: 177 ---KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
VFD+ P+R L SW A+I G + G +EA+ F ++ G PD V ++S +AC
Sbjct: 143 NAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACT 202
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+LG L L VH+YV + +++ + NSLID+Y +CG ++ A +VF ++++ V SW
Sbjct: 203 NLGALSFGLWVHRYV--LSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSW 260
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+IVG+AANG ANE+L F M+ G P+ VTF G L+AC H G V+EG +F+MMK+
Sbjct: 261 NSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKH 320
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN-VKMG 412
Y+I PR HYGC+VDL RAG LE+A +VE MPMK N V+ G L+ AC GN +
Sbjct: 321 DYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILA 380
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E + K++ +L+ S YV+LSN+YA+ G WE ++R MK L K P YS
Sbjct: 381 ERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 433
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL--G 236
+++ + SW + I LS+DGR EA+ F ++ G EP+ +T +++ SACG+ G
Sbjct: 13 LNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSG 72
Query: 237 DLELALQVHKY----------------VFQVKSK--------------QKSDTLMLNSLI 266
L +H Y + + SK + +++ N++I
Sbjct: 73 SEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMI 132
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D Y + G++D A VF ++ ++ SWT+MI G+ G EAL F M+ SG+ P++V
Sbjct: 133 DGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYV 192
Query: 327 TFVGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+ ++AC + G + G H + + ++ ++ R ++ ++DL R G +E AR +
Sbjct: 193 AIISAVAACTNLGALSFGLWVHRYVLSQD-FRNNVRVSN--SLIDLYCRCGCVEFARQVF 249
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR-GLW 443
+ M K VV W ++ GN + +Q DG + S GL
Sbjct: 250 DKME-KRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLV 308
Query: 444 EEVERIRAVMKH 455
EE + +MKH
Sbjct: 309 EEGFQYFQMMKH 320
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 232/412 (56%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + ++R M+ F W ++ +T+ +AL+I+ M
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMR 264
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ D YT +L A L ALE G+Q+H+ +R + N F S + +YSK +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIK 324
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF + + SW A+I G Q+G ++EA+ +F +++ G +PDD T+ SV S+C
Sbjct: 325 LAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S + N+L+ +YGKCG ++ A+++F E+ + SW
Sbjct: 385 NLASLEEGAQFH--CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 442
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+++ GYA G A E +D F M G++P+ VTF+GVLSAC G V++G+ +F M+
Sbjct: 443 TALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQK 502
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P HY CM+DL R+G L+EA ++ MPM + + WG L+ AC G++++G+
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGK 562
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A++L E++P + +YV+L +++A++G W EV ++R M+ R + K P S
Sbjct: 563 WAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCS 614
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 183/394 (46%), Gaps = 54/394 (13%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAF---------HWNNIIRLYTRLEAPKKALDIYIFMS 113
NL N + + + +L A F +N +I ++ + +A+ +Y+ +
Sbjct: 71 NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130
Query: 114 RA--GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK--- 168
+A V P T+ ++ A+ L +G+Q H +RLG +N F S + +Y+K
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190
Query: 169 AGD----------------------------FEKARKVFDENPERKLGSWNAIIAGLSQD 200
GD E+AR++F+ +R +W ++ G +Q+
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQN 250
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G EA+++F ++ G D T S+ +ACG+L LE Q+H Y+ ++++ +
Sbjct: 251 GLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI--IRTRYDDNVF 308
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++L+DMY KC + LA VF + N+ SWT++IVGY NG + EA+ F M+ G
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGL 376
I P+ T V+S+C + ++EG F + + HY +V L G+ G
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQF-----HCLALVSGLMHYITVSNALVTLYGKCGS 423
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+E+A + + M + V W L+ +FG K
Sbjct: 424 IEDAHRLFDEMSFH-DQVSWTALVSGYAQFGRAK 456
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 76/307 (24%)
Query: 162 FISLYSKAGDFEKARKVFDENP-------------------------------ERKLGSW 190
++ Y KAG +AR+VFD P +R + S+
Sbjct: 47 LLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSY 106
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKC--GFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
NA+IAG S G +A+ +++ L + P +TM ++ A +LGD L Q H +
Sbjct: 107 NAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQI 166
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS----------------- 291
++ ++ + + L+DMY K + A + F E+D NV
Sbjct: 167 LRLGFG--ANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224
Query: 292 --------------SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
+WT+M+ G+ NGL +EAL+ F MR GI + TF +L+AC
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+++GK + Y I R+ +VD+ + ++ A + M K N+
Sbjct: 285 LSALEQGKQI-----HAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK-NI 338
Query: 394 VIWGCLM 400
+ W L+
Sbjct: 339 ISWTALI 345
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 223/377 (59%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL ++ M G P+ +TL +LKAS + GRQLH+ ++
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + N S + +Y++ +A+ +F+ + + SWNA+IAG ++ G + +
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + GFEP T SV +AC S G LE VH +V +KS + + N+LIDM
Sbjct: 294 LFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV--IKSGGQPIAYIGNTLIDM 351
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A KVF + + ++ SW S+I GYA +GL EAL F M ++ ++PN +TF
Sbjct: 352 YAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 411
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG+++FE+MK ++IE + AH+ +VDLLGRAG L EA +E MP
Sbjct: 412 LSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 470
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +WG L+G+C N+ +G + A+ + EL+P G +V+LSNIYAS G + +
Sbjct: 471 IKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAK 530
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 531 VRKMMKESGVKKEPACS 547
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 215/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I+ + +++ M R+G D + + +++A ++A + G+ H L +
Sbjct: 182 WGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCI 241
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ ++SN F ++ + +Y K G + A K+F+E R + W+AIIAG +++GRA E+I
Sbjct: 242 KKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESI 301
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
MF + P+ VT S+ AC SLG L+ VH Y+ +++ + D S ID
Sbjct: 302 SMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYM--IRNGVELDVKNYTSFID 359
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + AY+VF +I + NV SW++MI G+ +GL EAL+ F+ MR PN VT
Sbjct: 360 MYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVT 419
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VLSAC H G+++EG F+ M Y I P HY CMVDLLGRAG ++EA + + M
Sbjct: 420 FVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNM 479
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + WG L+GAC ++ E VAK L LE G YV+LSNIYA G+WE V+
Sbjct: 480 PTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVK 539
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ R M + + KI ++
Sbjct: 540 KTRLKMCEKGIHKIVGFT 557
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 18/368 (4%)
Query: 46 THEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLY 96
H+ A+I+ L + +LL I+ I+ LH S AF+ WN I+ +
Sbjct: 31 NHQLNAQILVNALHR--SLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASH 88
Query: 97 TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNE 156
++ + L ++ M + G L D + L +KA L + + HSLA++L LE +
Sbjct: 89 SKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDP 148
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
+ +++Y++ G E+A KVF+E P + W +I G ++F +++
Sbjct: 149 YVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRS 208
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
GFE D + + ACG++ + H + K+ S+ + SL+DMY KCG +D
Sbjct: 209 GFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIK-KNFIDSNFFLQTSLVDMYMKCGFLD 267
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A K+F EI +V W+++I G+A NG A E++ F M + PN VTF ++ AC
Sbjct: 268 FALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACS 327
Query: 337 HGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
G +++G+ H + M++N +++ + +Y +D+ + G + A + +P K NV
Sbjct: 328 SLGSLKQGRSVHGY-MIRNGVELDVK--NYTSFIDMYAKCGCIVTAYRVFCQIPEK-NVF 383
Query: 395 IWGCLMGA 402
W ++
Sbjct: 384 SWSTMING 391
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 8/220 (3%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY W+ II + R +++ ++ M V P+ T ++ A L +L+ GR
Sbjct: 277 SYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGR 336
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H +R G+E + + FI +Y+K G A +VF + PE+ + SW+ +I G G
Sbjct: 337 SVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHG 396
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EA+++F ++ P+ VT VSV SAC G +E H F+ S+ T +
Sbjct: 397 LCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWS-H---FKSMSRDYGITPV 452
Query: 262 ---LNSLIDMYGKCGRMDLAYKVFWEI-DQPNVSSWTSMI 297
++D+ G+ G++D A + +P S+W +++
Sbjct: 453 EEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/378 (37%), Positives = 219/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W+ +I Y ++ AL +Y M G+ P TL +L+A QL L+ G++LH
Sbjct: 279 WSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHM 338
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ G++ + + IS+Y+K G + A DE + S++AII+G Q+G A++A+
Sbjct: 339 IKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKAL 398
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ G P TM+++ AC L L+ H Y V +DT + N++ID
Sbjct: 399 LIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYT--VVRGFTNDTSICNAIID 456
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG++ ++ ++F + ++ SW +MI+GY +GL EAL F ++ G++P+ VT
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VLSAC H G V EGK++F M + I+PR AHY CMVDLL RAG L+EA ++ M
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P NV IWG L+ AC N++MGE V+K +Q L P G +V++SNIY+S G W++
Sbjct: 577 PFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAA 636
Query: 448 RIRAVMKHRNLAKIPAYS 465
IR++ +H K P S
Sbjct: 637 YIRSIQRHHGYKKSPGCS 654
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 165/337 (48%), Gaps = 9/337 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR Y ++++ +Y+ M + GV P +T P +LKA L AL++GR +H+ A
Sbjct: 75 WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRAKEA 206
LGL + + + + +Y+K G +A+ +F+ + +R + +WNA+IA S +
Sbjct: 135 ILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQT 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I +++ G P+ T+VS+ G L +H Y +++ + ++ +L+
Sbjct: 195 IHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY--IRNFFFDNVVLQTALL 252
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNH 325
DMY KC + A K+F +++ N W++MI GY + ++AL + M G+ P
Sbjct: 253 DMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP 312
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T +L AC ++ GK M+K+ ++ ++ + + G+++ A +
Sbjct: 313 ATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVG--NSLISMYAKCGIMDNAVGFL 370
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
+ M K + V + ++ C + G + + + +Q
Sbjct: 371 DEMIAK-DTVSYSAIISGCVQNGYAEKALLIFRQMQS 406
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 14/239 (5%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
+ + AR VFD+ P+ + WN +I + G +++I +++ + + G P + T +
Sbjct: 55 NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP- 288
AC SL L+L +H + + D + +L+ MY KCG + A +F I
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSM--DLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 289 -NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
++ +W +MI ++ + L + + M+++G+ PN T V +L + +GK
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 348 FEMMKNVYQIEPRF----AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ Y I F ++D+ + LL AR + + K N V W ++G
Sbjct: 233 -----HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVN-KKNDVCWSAMIGG 285
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/409 (36%), Positives = 213/409 (52%), Gaps = 34/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I LY P KA I+ + +G+ PD + + + A L GR +H +
Sbjct: 322 WTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVF 381
Query: 149 RLGLESNEFCESGFISLYSKAG-------------------------------DFEKARK 177
R L S+ + I +YS++G D E AR+
Sbjct: 382 RFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARR 441
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLG 236
+FDE P R SW A+I G Q +++F ++ G + P +T+V+V S C +G
Sbjct: 442 IFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIG 501
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+L VH YV K+ D + N+L+DMY K G + LA K+F E+ + +V SWT+M
Sbjct: 502 AFDLGSSVHGYVN--KTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTM 559
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G AL+ F M +SG PN VT + VLSAC H G V EG+ F+ M +
Sbjct: 560 ISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHG 619
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I+P+ HYGCMVDLLGRAGLL EA+ ++E MP+K + VIW L+ AC GN+ + E
Sbjct: 620 IKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAG 679
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
K + ELEP DG Y++L NIY S WE+ + R M+ R + K P S
Sbjct: 680 KMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRDRRVKKKPGCS 728
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 133/326 (40%), Gaps = 47/326 (14%)
Query: 136 ALEIGRQLHSLAVRLGL--ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+LE +Q+H AV LGL + ++ Y++ G A+KVF+ + SW +
Sbjct: 266 SLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCL 325
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I+ + +A +F L G PD +V SACG DL VH VF+
Sbjct: 326 ISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRF-- 383
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS------------------ 295
+ SD ++ N+LIDMY + G +++A VF ++ +VSSWTS
Sbjct: 384 ELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIF 443
Query: 296 -------------MIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACVHGGKV 341
MI GY + L+ F MR G P +T V VLS C G
Sbjct: 444 DEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAF 503
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G + N ++ ++D+ ++G L A + + MP K +V W ++
Sbjct: 504 DLGSSVHGYV-NKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMP-KRDVFSWTTMIS 561
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSD 427
G K LE +SD
Sbjct: 562 GLALHG---------KGTHALEAFSD 578
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
CGSL L+ Q+H + + L++ Y + G A KVF I P++
Sbjct: 264 CGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIV 320
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SWT +I Y +A F ++ SG+RP+ VG +SAC H + G+ M
Sbjct: 321 SWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGM- 379
Query: 352 KNVYQIE----PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
V++ E P + ++D+ R+G +E A ++ + M +K +V W L+ K
Sbjct: 380 --VFRFELGSDPIVGN--ALIDMYSRSGAIEVACSVFKTMEIK-DVSSWTSLLNGFIKCN 434
Query: 408 NVK 410
+++
Sbjct: 435 DIE 437
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 220/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II + + A++++ M +GV PD TL + A Q + GR +H V
Sbjct: 239 WNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMV 298
Query: 149 RLGLESNEFCE-SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G + + + + +Y+K E A+++FD P R SWN +I G Q+G A EAI
Sbjct: 299 RRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAI 358
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ ++K G +P T VSV A LG L+ ++H +K+ D + +I
Sbjct: 359 HVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMH--ALSIKTGLNLDVYVGTCVI 416
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+Y KCG++D A +F + + + W ++I G +G +AL F M++ GI P+HV
Sbjct: 417 DLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHV 476
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +L+AC H G V +G++FF MM+ Y I+P HY CMVD+ GRAG L++A +
Sbjct: 477 TFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRN 536
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP+K + IWG L+GAC GNV+MG+ +++L EL+P + G YV++SN+YA G W+ V
Sbjct: 537 MPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGV 596
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ +R++++ +NL K P +S
Sbjct: 597 DEVRSLVRRQNLQKTPGWS 615
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 163/315 (51%), Gaps = 9/315 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ R +A+ ++ M GV D T+ VL L + +H AV
Sbjct: 138 WNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAV 197
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ F + I +Y K G E+ RKVFD R L +WN+II+G Q G+ A++
Sbjct: 198 KHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVE 257
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF G++ G PD +T++S+ SA GD+ VH Y+ + + D + N+++DM
Sbjct: 258 MFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVR-RGWDVGDIIAGNAIVDM 316
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVT 327
Y K +++ A ++F + + SW ++I GY NGLA+EA+ + +M++ G++P T
Sbjct: 317 YAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGT 376
Query: 328 FVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
FV VL A H G +Q+G + +K ++ C++DL + G L+EA + E
Sbjct: 377 FVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGT--CVIDLYAKCGKLDEAMLLFEQ 434
Query: 387 MPMKA----NVVIWG 397
P ++ N VI G
Sbjct: 435 TPRRSTGPWNAVISG 449
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 169/338 (50%), Gaps = 13/338 (3%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKV 178
D +T P +L+A+ QLH+ A+RLGL + F + Y + G A +
Sbjct: 70 DAFTFPPLLRAAQ---GPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE R + +WNA+++GL ++ RA EA+ +F + G D VT+ SV C LGD
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
LAL +H Y VK + + N++ID+YGK G ++ KVF + ++ +W S+I
Sbjct: 187 ALALAMHLYA--VKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIIS 244
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQ 356
G+ G A++ F MR+SG+ P+ +T + + SA G + G+ H + M++ +
Sbjct: 245 GHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCY-MVRRGWD 303
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ A +VD+ + +E A+ M + MP++ + V W L+ + G V
Sbjct: 304 VGDIIAG-NAIVDMYAKLSKIEAAQRMFDSMPVR-DAVSWNTLITGYMQNGLASEAIHVY 361
Query: 417 KHLQELEPWS--DGAYVVLSNIYASRGLWEEVERIRAV 452
H+Q+ E G +V + Y+ G ++ R+ A+
Sbjct: 362 DHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHAL 399
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 230/406 (56%), Gaps = 10/406 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++++ ++++ + M+ W ++I Y + + P +A+ + M + P
Sbjct: 98 KCGSVVEAHKVFDKMRNKDMVS-------WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKP 150
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ +T +LKA IG Q+H+LAV+ + + S + +Y++ G + A VF
Sbjct: 151 NGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVF 210
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ + SWNA+I+G ++ G + A+ +F +++ GFE T S+ SA +G LE
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALE 270
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
VH ++ +KS+QK + N+++DMY K G M A KVF + ++ +W SM+
Sbjct: 271 QGKWVHAHM--IKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
+A GL EA+ F MR+SGI N ++F+ +L+AC HGG V+EGKH+F+M+K Y +EP
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKE-YNLEP 387
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
HY +VDLLGRAGLL A + MPM+ +WG L+ AC N K+G++ A H+
Sbjct: 388 EIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHV 447
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L+P G V+L NIYAS G W+ R+R +MK + K PA S
Sbjct: 448 FQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACS 493
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 148/295 (50%), Gaps = 7/295 (2%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A Q L+ R++H+ + F ++ I LY K G +A KVFD+ + +
Sbjct: 58 ITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKDM 117
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW ++IAG +Q+ EAI + G+ K F+P+ T S+ A G+ D + Q+H
Sbjct: 118 VSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIH-- 175
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
VK D + ++L+DMY +CG+MD+A VF ++D N SW ++I G+A G
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
AL F M+ +G H T+ + SA G +++GK M Q F M
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVG-NTM 294
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
+D+ ++G + +AR + E + + ++V W ++ A ++G +G+ H +E+
Sbjct: 295 LDMYAKSGSMIDARKVFERV-LNKDLVTWNSMLTAFAQYG---LGKEAVSHFEEM 345
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 221/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + ++A++++ M RA VLP+ +T VL++ + L++G+Q+H +
Sbjct: 211 WSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVL 270
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+ N F + + +Y+K G + + K+F E P R +WN +I G Q G +A+
Sbjct: 271 KVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALS 330
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + +C + +VT SV AC SL +EL Q+H +K+ D ++ N+LIDM
Sbjct: 331 LYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHS--LSLKTIYDKDVVVGNALIDM 388
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + + SW +MI GY+ +GL EAL F M+E+ PN +TF
Sbjct: 389 YAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTF 448
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V +LSAC + G + G+++F+ M Y IEP HY CMV LLGR+G L++A ++E +P
Sbjct: 449 VSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIP 508
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ NV +W L+GAC +V +G A+ + +++P + +V+LSNIYA W V
Sbjct: 509 LEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVAS 568
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK++ + K P S
Sbjct: 569 VRKFMKNKGVKKEPGLS 585
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 172/336 (51%), Gaps = 6/336 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + + +L ++ M G P+ +T VLKA L A +G+ +H +
Sbjct: 110 WTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVL 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ E + + G + LY+K GD +VF+E P+ + W+ +I+ +Q +++EA++
Sbjct: 170 KTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVE 229
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ P+ T SV +C S+ +L+L QVH +V +V + + N+L+D+
Sbjct: 230 LFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKV--GLDGNVFVSNALMDV 287
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+D + K+F E+ N +W +MIVGY +G ++AL + M E ++ + VT+
Sbjct: 288 YAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTY 347
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL AC ++ G + +K +Y + + ++D+ + G ++ AR +V M
Sbjct: 348 SSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN--ALIDMYAKCGSIKNAR-LVFDM 404
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
+ + + W ++ G V + +QE E
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETE 440
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 17/322 (5%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
++ Y +F + ++ L++R+ L+ ++F + L +++ C E
Sbjct: 12 LIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTT---------ILKLLVSVECA----E 58
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+ LH+ +LG ESN F + I Y+ G AR+ FD + + SW ++A +
Sbjct: 59 LAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
++ R ++++ +F ++ GF P+ T V AC L + VH V +K+ + D
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCV--LKTCYEMD 176
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ L+D+Y K G + +VF E+ + +V W+ MI YA + + EA++ F MR
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR 236
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ + PN TF VL +C +Q GK + V ++ ++D+ + G L+
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKV-GLDGNVFVSNALMDVYAKCGRLD 295
Query: 379 EARAMVEGMPMKANVVIWGCLM 400
+ + +P + N V W ++
Sbjct: 296 NSMKLFMELPNR-NEVTWNTMI 316
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P+R S+ +I G Q + E +D+F + + G E + ++ S+ ELA
Sbjct: 2 PDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAY 61
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+H ++ K +S+ + +LID Y CG ++ A + F I ++ SWT M+ YA
Sbjct: 62 SLHACIY--KLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRF 361
N ++L F MR G PNH TF GVL AC+ GK ++K Y+++ +
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD-LY 178
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
G ++DL + G + + E MP K +V+ W ++
Sbjct: 179 VGVG-LLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMI 215
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 217/378 (57%), Gaps = 4/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + + P AL + M G+ PD T+ + QL IGR +H V
Sbjct: 317 WNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVV 376
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R LE + + +++Y+K G + AR VF++ P R + SWN +I G +Q+G A EAI
Sbjct: 377 RCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAI 436
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D + +++ P+ T VS+ A +G L+ +++H + +K+ D + LI
Sbjct: 437 DAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRL--IKNCLFLDVFVATCLI 494
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCGR++ A +F+EI Q W ++I +G +AL F MR G++ +H+
Sbjct: 495 DMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHI 554
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V E + F+ M+ Y+I+P HYGCMVDL GRAG LE+A +V
Sbjct: 555 TFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSN 614
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++A+ IWG L+ AC GN ++G + + L E++ + G YV+LSNIYA+ G WE
Sbjct: 615 MPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGA 674
Query: 447 ERIRAVMKHRNLAKIPAY 464
++R++ + R L K P +
Sbjct: 675 VKVRSLARDRGLRKTPGW 692
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 165/307 (53%), Gaps = 5/307 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + +AL + M V D T+ +L Q + G +H +
Sbjct: 216 WNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVI 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F + I++YSK G + A++VFD R L SWN+IIA Q+ A+
Sbjct: 276 KHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALG 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + G PD +T+VS+ S G L D + VH +V + + + D ++ N+L++M
Sbjct: 336 FFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLE-VDIVIGNALVNM 394
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNHVT 327
Y K G +D A VF ++ +V SW ++I GYA NGLA+EA+D ++ M E I PN T
Sbjct: 395 YAKLGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGT 454
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V +L A H G +Q+G K ++KN ++ A C++D+ G+ G LE+A ++
Sbjct: 455 WVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVA--TCLIDMYGKCGRLEDAMSLFYE 512
Query: 387 MPMKANV 393
+P + +V
Sbjct: 513 IPQETSV 519
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 171/338 (50%), Gaps = 14/338 (4%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALD-IYIFMSRAGVLPDCYTLPIVLK 129
+ HI R ++ F WN+++ Y R + ++D + +S +GV PD YT P VLK
Sbjct: 106 FKHIQRKNI-------FSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLK 158
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
A +L G ++H +++G E + + + I LYS+ G E A KVF + P R +GS
Sbjct: 159 AC---LSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGS 215
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WNA+I+G Q+G EA+ + +K + D VT+ S+ C D+ + VH YV
Sbjct: 216 WNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYV- 274
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+K +SD + N+LI+MY K GR+ A +VF ++ ++ SW S+I Y N A
Sbjct: 275 -IKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTA 333
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD 369
L F M G+RP+ +T V + S + G+ + +E +V+
Sbjct: 334 LGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVN 393
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ + G ++ ARA+ E +P + +V+ W L+ + G
Sbjct: 394 MYAKLGSIDCARAVFEQLPSR-DVISWNTLITGYAQNG 430
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 136/272 (50%), Gaps = 12/272 (4%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+ + +QLH+L + LG + + ++LY+ GD + F + + SWN++++
Sbjct: 64 INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123
Query: 197 LSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+ GR ++++D L G PD T V AC SL D E ++H +V ++ +
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGE---KMHCWVLKMGFEH 180
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + SLI +Y + G +++A+KVF ++ +V SW +MI G+ NG EAL
Sbjct: 181 --DVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M+ ++ + VT +L C V G H + + + +E ++++ +
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIK---HGLESDVFVSNALINMYSK 295
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
G L++A+ + +GM ++ ++V W ++ A E+
Sbjct: 296 FGRLQDAQRVFDGMEVR-DLVSWNSIIAAYEQ 326
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
S ++ +A Q+H + + Q D ++L L+ +Y G + L+ F I + N+ SW
Sbjct: 60 SCTNINVAKQLHALLLVLGKAQ--DVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSW 117
Query: 294 TSMIVGYAANGLANEALDCF-HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
SM+ Y G +++DC + SG+RP+ TF VL AC+ + +G+
Sbjct: 118 NSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKM----- 169
Query: 353 NVYQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + ++ F H ++ L R G +E A + MP++ +V W ++ + GN
Sbjct: 170 HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMISGFCQNGN 228
Query: 409 V 409
V
Sbjct: 229 V 229
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 213/372 (57%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + P K+LD+++ M +G+ PD +T+ +L A +L L G+++H +
Sbjct: 470 WNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFML 529
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE +EF +SLY + + +FD+ + L WN +I G SQ+ EA+D
Sbjct: 530 RNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALD 589
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + G +P ++ + V AC + L L +VH F +K+ D + +LIDM
Sbjct: 590 TFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHS--FALKAHLSEDAFVTCALIDM 647
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG M+ + +F +++ + + W +I GY +G +A++ F M+ G RP+ TF
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL AC H G V EG + M+N+Y ++P+ HY C+VD+LGRAG L EA +V MP
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMP 767
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + IW L+ +C +G++++GE V+K L ELEP YV+LSN+YA G W+EV +
Sbjct: 768 DEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRK 827
Query: 449 IRAVMKHRNLAK 460
+R MK L K
Sbjct: 828 VRQRMKENGLHK 839
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 125/453 (27%), Positives = 206/453 (45%), Gaps = 72/453 (15%)
Query: 5 VPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK---- 60
VP SL+S K+ P+L RL H ++ A + L +H + ++ +SK
Sbjct: 41 VPKSSLTS-HTKTHSPILQRL---HNLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIG 96
Query: 61 -----C---TNLLQLNQIYAHIIRTHMLHS-----------YSAA--------------- 86
C N+ +++A + +H L + YSA
Sbjct: 97 ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 87 ---FHWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F +N ++ Y+R + A+ +++ +S + PD +TLP V KA + +E+G
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+LA++ G S+ F + I++Y K G E A KVF+ R L SWN+++ S++G
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 203 AKEAIDMFIGL---KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
E +F L ++ G PD TMV+V AC ++G++ + + VH F++ + +
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITE--EV 334
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RE 318
+ NSL+DMY KCG + A +F NV SW ++I GY+ G + M RE
Sbjct: 335 TVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL------- 371
+R N VT + VL AC G+H +K ++ R +G + D L
Sbjct: 395 EKVRVNEVTVLNVLPAC-------SGEHQLLSLKEIHGYAFR---HGFLKDELVANAFVA 444
Query: 372 --GRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ L+ A + GM K V W L+GA
Sbjct: 445 AYAKCSSLDCAERVFCGMEGKT-VSSWNALIGA 476
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 150/324 (46%), Gaps = 28/324 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-----------GVLPDCYTLPIVLKASCQLFAL 137
WN II Y++ + ++ M R VLP C QL +L
Sbjct: 368 WNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPAC-------SGEHQLLSL 420
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+++H A R G +E + F++ Y+K + A +VF + + SWNA+I
Sbjct: 421 ---KEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAH 477
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+Q+G +++D+F+ + G +PD T+ S+ AC L L ++H F +++ +
Sbjct: 478 AQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHG--FMLRNGLEL 535
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D + SL+ +Y +C M L +F +++ ++ W MI G++ N L EALD F M
Sbjct: 536 DEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQML 595
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
GI+P + GVL AC ++ GK + E F ++D+ + G +
Sbjct: 596 SGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCA-LIDMYAKCGCM 654
Query: 378 EEARAMVEGMPMKA----NVVIWG 397
E+++ + + + K NV+I G
Sbjct: 655 EQSQNIFDRVNEKDEAVWNVIIAG 678
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 153/305 (50%), Gaps = 12/305 (3%)
Query: 124 LPIVLKASCQLFALEIGRQLHSL-AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+ I+L+A + +GR++H+L + L ++ + I++YS G +R VFD
Sbjct: 95 IGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAA 154
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELA 241
E+ L +NA+++G S++ ++AI +F+ L PD+ T+ V AC + D+EL
Sbjct: 155 KEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELG 214
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
VH +K+ SD + N+LI MYGKCG ++ A KVF + N+ SW S++ +
Sbjct: 215 EAVH--ALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACS 272
Query: 302 ANGLANEALDCFHYM---RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
NG E F + E G+ P+ T V V+ AC G+V+ G + + I
Sbjct: 273 ENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKL-GIT 331
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
+VD+ + G L EARA+ + M NVV W ++ K G+ + V +
Sbjct: 332 EEVTVNNSLVDMYSKCGYLGEARALFD-MNGGKNVVSWNTIIWGYSKEGDFR---GVFEL 387
Query: 419 LQELE 423
LQE++
Sbjct: 388 LQEMQ 392
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 230/410 (56%), Gaps = 35/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y R+E ++AL +Y M G+ P T+ ++ A + A+ G+QLH + V
Sbjct: 161 WGTIIDGYVRVERLREALMMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVV 220
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
+ + +F ++ I YS G ++AR+
Sbjct: 221 KTSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARE 280
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E PER + SW+ +I+G +Q + A+++F + G P++VTMVSV SA +LG
Sbjct: 281 LFNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGT 340
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--PNVSSWTS 295
L+ H+YV S +D L S+IDMY KCG ++ A +VF++I VS W +
Sbjct: 341 LKEGRWAHEYV-HYNSIPLNDNLSA-SIIDMYAKCGSINTALEVFYQIRDKASTVSPWNT 398
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I G A +G A +L+ + ++ I+ + +TF+GVLSAC H G V GK +F+ MK+ Y
Sbjct: 399 IICGLATHGHAKLSLEIYSDLQRRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKY 458
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
I+P HYGCMVDLLG+AG LEE ++ MPMKA+VVIWG L+ AC+ N+ +GE
Sbjct: 459 NIDPDIRHYGCMVDLLGKAGRLEEVEELIRSMPMKADVVIWGMLLSACKTHRNITIGERA 518
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A++L +L+P + ++LSN+YA G WE+ +R VM+ + ++P YS
Sbjct: 519 AENLAKLDPSHGPSRILLSNLYADVGRWEDAFLVRRVMQSHRMHRLPGYS 568
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 162/382 (42%), Gaps = 68/382 (17%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ +Y M GV+P+ T+ V+ A C++ + R LH L +++ + + +
Sbjct: 44 EAIKVYKEMRSVGVVPNEVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLL 103
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG---------------------- 201
++Y + +AR +FDE E+ + SWN ++ G S+ G
Sbjct: 104 NMYCASSSLGEARALFDEMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGT 163
Query: 202 ---------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
R +EA+ M+ + G P +VTM+ + SACG + Q+H V VK
Sbjct: 164 IIDGYVRVERLREALMMYRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVV--VK 221
Query: 253 SKQKSDTLMLNSLIDMYGKCGR-------------------------------MDLAYKV 281
+ + ++I Y CGR +D A ++
Sbjct: 222 TSFDCYDFVQATVIHFYSACGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQAREL 281
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F E+ + +V SW++MI GY + AL+ FH M SGIRPN VT V V SA G +
Sbjct: 282 FNEMPERDVFSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTL 341
Query: 342 QEGKHFFEMMK-NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI-WGCL 399
+EG+ E + N + + ++D+ + G + A + + KA+ V W +
Sbjct: 342 KEGRWAHEYVHYNSIPLNDNLS--ASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTI 399
Query: 400 MGACEKFGNVKMGEWVAKHLQE 421
+ G+ K+ + LQ
Sbjct: 400 ICGLATHGHAKLSLEIYSDLQR 421
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS Y K+G+ + ARK+F+ P++ S+ +I G ++ EAI ++ ++ G P++
Sbjct: 2 ISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPNE 61
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQV-----------------------------KS 253
VTM SV SAC +G + +H V ++
Sbjct: 62 VTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFDE 121
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
Q+ + + N +++ Y K G +LA +VF I ++ SW ++I GY EAL +
Sbjct: 122 MQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMMY 181
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
M +G+ P+ VT + ++SAC + EG+
Sbjct: 182 RLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQL 215
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W+ +I YT+ + P AL+++ M +G+ P+ T+ V A L L+ GR H
Sbjct: 291 FSWSTMISGYTQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEY 350
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAK 204
+ N+ + I +Y+K G A +VF + ++ + WN II GL+ G AK
Sbjct: 351 VHYNSIPLNDNLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAK 410
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--L 262
+++++ L++ + +T + V SAC G + L Y +KSK D +
Sbjct: 411 LSLEIYSDLQRRHIKLSAITFIGVLSACCHAGLVGLG---KSYFKSMKSKYNIDPDIRHY 467
Query: 263 NSLIDMYGKCGRMD 276
++D+ GK GR++
Sbjct: 468 GCMVDLLGKAGRLE 481
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+I Y K G +D A K+F + Q S+T+MI+G+ N EA+ + MR G+ PN
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 325 HVTFVGVLSACVHGGKVQEGKHF----FEMMKNVYQ-IEPRFAHYGCMVDLLGRAGLLEE 379
VT V+SAC G++ + + +MM + + + + C LG E
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLG------E 114
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
ARA+ + M K NVV W ++ K G + AK + E+ P D V I
Sbjct: 115 ARALFDEMQEK-NVVSWNVMLNGYSKAGFANL----AKEVFEMIP--DKDIVSWGTIIDG 167
Query: 440 RGLWEEVERIR-AVMKHR 456
+ VER+R A+M +R
Sbjct: 168 ---YVRVERLREALMMYR 182
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 220/377 (58%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL+++I M RAG + +TL VL + +++ Q+HSL V
Sbjct: 110 WTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVV 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ES+ F S + +Y K+G+ ++ARKVFD PER S AII+G +Q G EA+D
Sbjct: 170 KTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALD 229
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L G + + VT ++ ++ L L QVH + + + ++ NSLIDM
Sbjct: 230 LFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLIL--RKELPFFIVLQNSLIDM 287
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ + +VF + Q + SW +M++GY +G+ E + F M E ++P+ VT
Sbjct: 288 YSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE-VKPDSVTL 346
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V EG F+++ HYGC++DLLGR+G L++A ++E MP
Sbjct: 347 LAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMP 406
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ IWG L+GAC NV +GE VA+ L ++EP + G YV+LSNIYA+ G+W++V R
Sbjct: 407 FEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWKDVFR 466
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + K PA S
Sbjct: 467 VRKLMLENTVTKEPAKS 483
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 176/345 (51%), Gaps = 33/345 (9%)
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A + AL GRQ+H+ V+ + + I LY + G + AR V D PER +
Sbjct: 48 ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPERNV 107
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW A+I+G SQ GR EA+++FI + + G + ++ T+ +V ++C ++ QVH
Sbjct: 108 VSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSL 167
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
V VK+ +S + +SL+DMYGK G + A KVF + + + S T++I GYA GL +
Sbjct: 168 V--VKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDD 225
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQ 356
EALD F + SG++ N+VTF +L++ VHG +++ FF +++N
Sbjct: 226 EALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQN--- 282
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
++D+ + G L +R + + MP ++ + LMG +G +G+ V
Sbjct: 283 ---------SLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMG----YGRHGIGQEVV 329
Query: 417 KHL----QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
+ +E++P S VLS + E ++ ++K +N
Sbjct: 330 QLFRTMTEEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQN 374
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 219/377 (58%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + P +AL + + M R P+ +T +LKA+ + IG Q+H+L V
Sbjct: 9 WTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTV 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + S + +Y++ G + A VFD+ + SWNA+IAG ++ G + +
Sbjct: 69 KYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLL 128
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF +++ GFE T SV SA +G LE VH ++ +KS ++ + N+++DM
Sbjct: 129 MFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHM--IKSGERLSAFVGNTILDM 186
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +D+ ++ +W SM+ +A GL EA+ F MR+ G+ N +TF
Sbjct: 187 YAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITF 246
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L+AC HGG V+EGK +F+MMK + +EP HY +VDLLGRAGLL +A + MP
Sbjct: 247 LSILTACSHGGLVKEGKQYFDMMKE-HNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP 305
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK +WG L+G+C N K+G++ A H+ EL+P G V+L NIYAS G W+ R
Sbjct: 306 MKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAAAR 365
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 366 VRKMMKATGVKKEPACS 382
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 124/239 (51%), Gaps = 9/239 (3%)
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + SW ++IAG +Q+ EA+ + +G+ + F+P+ T S+ A G+ + Q+
Sbjct: 4 RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H VK D + ++L+DMY +CGRMD+A VF +++ N SW ++I G+A G
Sbjct: 64 H--ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 121
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAH 363
L F M+ +G H T+ V SA G +++GK M+K+ ++ +
Sbjct: 122 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 181
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
++D+ ++G + +AR + + + K ++V W ++ A ++G +G H +E+
Sbjct: 182 --TILDMYAKSGSMIDARKVFDHVD-KKDLVTWNSMLTAFAQYG---LGREAVTHFEEM 234
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 135/304 (44%), Positives = 187/304 (61%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ + G AR+VFDE P SW A+I G ++GR EAID F + + G EPD
Sbjct: 143 MITGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPD 202
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
VT+V+ SAC +G L L + VH++V V + + + + NSLIDMY +CG++D A +V
Sbjct: 203 YVTLVAAISACAEVGALGLGMWVHRFV--VDKRLEHNVRVANSLIDMYARCGQVDFARQV 260
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F I + V SW SMIVG+AANG +A++ F MR G +P+ VTF GVL+AC H G
Sbjct: 261 FGRIRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAGLT 320
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG +++ M+ + I R HYGC+VDLLGRAG L EA +VE MPM+ N V+ G L+
Sbjct: 321 DEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLGEAMRVVESMPMRPNEVVLGALLA 380
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
C G+V + E + +HL E +P D YV+LSNIYA+ G W ++R++MK R + K
Sbjct: 381 GCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWGGAGKVRSLMKSRGVKKR 440
Query: 462 PAYS 465
P S
Sbjct: 441 PGQS 444
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 122/251 (48%), Gaps = 8/251 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +A+D + M R GV PD TL + A ++ AL +G +H V
Sbjct: 171 WTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVV 230
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
LE N + I +Y++ G + AR+VF +R + SWN++I G + +G+ +A++
Sbjct: 231 DKRLEHNVRVANSLIDMYARCGQVDFARQVFGRIRKRTVVSWNSMIVGFAANGQYADAVE 290
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSLI 266
F +++ GF+PD VT V +AC G + L +Y ++++ M ++
Sbjct: 291 HFEAMRREGFKPDTVTFTGVLTACSHAGLTDEGL---RYYDAMRTEHGIAARMEHYGCVV 347
Query: 267 DMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYM--RESGIRP 323
D+ G+ GR+ A +V + +PN +++ G +G + A ++ ++ G
Sbjct: 348 DLLGRAGRLGEAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDS 407
Query: 324 NHVTFVGVLSA 334
N+V + +A
Sbjct: 408 NYVLLSNIYAA 418
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 48/258 (18%)
Query: 183 PERKLGSWNAIIAGLSQDG--RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD--- 237
P R + SW + IA +++G + A + P+DVT+++V SAC GD
Sbjct: 27 PPRDVVSWTSAIARPAREGDLQGAAAALSAMLSSPAAPPPNDVTLLTVLSACA--GDSSS 84
Query: 238 ---LELALQVHKYVFQV----------------------------KSKQKSDTLMLNSLI 266
LAL +H ++ S + N++I
Sbjct: 85 ALARPLALSLHALAVKLFPCNLLLCTCLARFYLASRLPHLAIKLFDSMPDRSVVTYNTMI 144
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+ G + A +VF E+ P+ SWT++I G NG +EA+DCFH M G+ P++V
Sbjct: 145 TGLMRNGLVAAAREVFDEMPAPDKVSWTALIDGCVKNGRHDEAIDCFHSMLRDGVEPDYV 204
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARA 382
T V +SAC G + G M + + ++ R H ++D+ R G ++ AR
Sbjct: 205 TLVAAISACAEVGALGLG-----MWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFAR- 258
Query: 383 MVEGMPMKANVVIWGCLM 400
V G K VV W ++
Sbjct: 259 QVFGRIRKRTVVSWNSMI 276
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 158/462 (34%), Positives = 247/462 (53%), Gaps = 46/462 (9%)
Query: 46 THEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS--------YSAAFHWNNIIRLYT 97
T + ++I++ LS+ +LL I+A+ I H HS + F WN++I Y
Sbjct: 42 TRQSHSRILSLGLSQ-NSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYA 100
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
+ +A ++ M + VLPD +TL + K S +L AL G+ +H ++R+G S+
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTV 160
Query: 158 CESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS------------------- 198
+ +S+Y K G+FE++RKVFDE R GSWN +IAG +
Sbjct: 161 VANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRN 220
Query: 199 ------------QDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVH 245
++G + EA+ +F ++ G EP+ V++VSV AC S L Q+H
Sbjct: 221 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIH 280
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--PNVSSWTSMIVGYAAN 303
F V+ + ++ + N+LIDMY KCG +D A +VF E D + SW+SMI GY +
Sbjct: 281 G--FAVRKELNNEVSLCNALIDMYSKCGSLDSARRVF-EDDSLCKDAISWSSMISGYGLH 337
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G EA+ + M ++GIRP+ +T VG+LSAC G V EG + + + N Y IEP
Sbjct: 338 GKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEI 397
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
+ C+VD+LGRAG L+ A ++ MP++ +WG L+ G+++M E + L +LE
Sbjct: 398 FACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLE 457
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
P + YV +SN+YAS W+ V +R +MK + L K+P S
Sbjct: 458 PENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCS 499
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 135/301 (44%), Gaps = 39/301 (12%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+L++ RQ HS + LGL N + I Y+ +R VFD + + WN++I
Sbjct: 38 SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +++ EA +F + PDD T+ +++ LG L +H ++
Sbjct: 98 GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK--SIRIGF 155
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVF----------WEI------------------DQ 287
SDT++ NS++ MY KCG + + KVF W + D+
Sbjct: 156 VSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDR 215
Query: 288 ---PNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQE 343
NV SWT+MI GY NG ++EAL F M+ GI PN V+ V VL AC +
Sbjct: 216 MKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLS 275
Query: 344 GK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ H F + K ++ + ++D+ + G L+ AR + E + + + W ++
Sbjct: 276 GRQIHGFAVRK---ELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMIS 332
Query: 402 A 402
Sbjct: 333 G 333
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 220/381 (57%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI----VLKASCQLFALEIGRQLH 144
W+ +I + +A ++ M G+ C+ P L+A L L +G QLH
Sbjct: 192 WSALIGGFVLCSRMTQAFLLFKAMLAQGL---CFLSPTSIASALRACASLDHLRMGEQLH 248
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG ++A +FDE + S++A+++G Q+GRA+
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + S+T + N+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSV--IIRGLASETSICNA 366
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCGR+DL+ +VF + ++ SW +MI GY +GL EA F M G P+
Sbjct: 367 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 426
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +LSAC H G V EGKH+F +M + Y + PR HY CMVDLL R G L+EA +
Sbjct: 427 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 486
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++A+V +W L+GAC + N+ +G+ V++ +QEL P G +V+LSNIY++ G ++
Sbjct: 487 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 546
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P S
Sbjct: 547 EAAEVRIIQKVQGFKKSPGCS 567
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 143/334 (42%), Gaps = 17/334 (5%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M R V P+ YT P LKA L GR +H A+ GL+++ F + + +Y K
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC--GFEPDDVTMVSVT 229
A +F P R L +WNA++AG + G A+ + ++ P+ T+V++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 230 SACGSLGDLELALQVHKYVFQV--------KSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
G L VH Y + KSK L+ +L+DMY KCG + A +V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG---IRPNHVTFVGVLSACVHG 338
F + N +W+++I G+ +A F M G + P + L AC
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 238
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
++ G+ ++ + ++ + +AGL+++A A+ + M +K + V +
Sbjct: 239 DHLRMGEQLHALLAK-SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSA 296
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
L+ + G + V K +Q D A +V
Sbjct: 297 LVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMV 330
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 213/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + + + I+ M G P+ +T VL++ L E G+Q+H+ +
Sbjct: 221 WNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHII 280
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + ++F + + +Y+KA E A FD R + SW II+G +Q +A++A+
Sbjct: 281 KNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVK 340
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ G +P++ T+ S S C + LE Q+H VK+ D + ++L+D+
Sbjct: 341 YFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLH--AVAVKAGHFGDIFVGSALVDL 398
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG M+ A +F + ++ SW ++I GY+ +G +AL+ F M GI P+ TF
Sbjct: 399 YGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATF 458
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC G V+EGK F+ M +Y I P HY CMVD+LGRAG E + +E M
Sbjct: 459 IGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN 518
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +IW ++GAC+ GNV GE AK L E+EP D +Y++LSNI+AS+G W++V
Sbjct: 519 LTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRN 578
Query: 449 IRAVMKHRNLAKIPAYS 465
IRA+M R + K P S
Sbjct: 579 IRALMTSRGIKKEPGCS 595
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 158/339 (46%), Gaps = 15/339 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y +L KK L ++ M +TL VLK +L G+ LH+LA+
Sbjct: 19 WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G E +EF + +YSK G A KVF + + +W+A+I GL Q G +EA +
Sbjct: 79 RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH----KYVFQVKSKQKSDTLMLNS 264
+F +++ G P+ T+ S+ S ++GDL +H KY F+ SD L+ N
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE------SDNLVSNP 192
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LI MY K ++ KVF + P++ SW +++ G+ + F+ M G +PN
Sbjct: 193 LIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPN 252
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+ VL +C + GK + + F +VD+ +A LE+A
Sbjct: 253 MFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-LVDMYAKARCLEDAGVAF 311
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
+ + + ++ W ++ + E K+ ++++
Sbjct: 312 DRL-VNRDIFSWTVIISG---YAQTDQAEKAVKYFRQMQ 346
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 92/173 (53%), Gaps = 2/173 (1%)
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
E A ++F PE+ SWNA++ G +Q G K+ + +F +K+C + T+ +V C
Sbjct: 2 ELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGC 61
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
+ G L +H ++S + D + SL+DMY KCG + A KVF +I P+V +
Sbjct: 62 ANTGSLREGKVLH--ALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVA 119
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
W++MI G G EA + FH MR G RPN T ++S + G ++ G+
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQ 172
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 153/356 (42%), Gaps = 70/356 (19%)
Query: 58 LSKCTNLLQL---NQIYAHIIR----------THMLHSYSAA------------------ 86
L C++LL Q++AHII+ T ++ Y+ A
Sbjct: 260 LRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDI 319
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W II Y + + +KA+ + M R G+ P+ YTL L + LE GRQLH++
Sbjct: 320 FSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAV 379
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV+ G + F S + LY K G E A +F R + SWN II+G SQ G+ ++A
Sbjct: 380 AVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKA 439
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F + G PD+ T + V SAC +G +E + K++ D S+
Sbjct: 440 LEAFRMMLSEGIMPDEATFIGVLSACSFMGLVE------------EGKKRFD-----SMS 482
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+YG P++ + M+ G NE ++ E + P +
Sbjct: 483 KIYGI---------------NPSIEHYACMVDILGRAGKFNEVK---IFIEEMNLTPYSL 524
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEEAR 381
+ VL AC G V G+ + K ++++EP + Y + ++ G ++ R
Sbjct: 525 IWETVLGACKLHGNVDFGE---KAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVR 577
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
M+LA ++F+ + + N SW +++ GYA G + L F M+E + + T VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 335 CVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGC-MVDLLGRAGLLEEARAMVEGMPMKAN 392
C + G ++EGK + +++ +I+ GC +VD+ + G + +A + + +
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDE---FLGCSLVDMYSKCGTVYDALKVFTKI-RNPD 116
Query: 393 VVIWGCLMGACEKFGN 408
VV W ++ ++ G+
Sbjct: 117 VVAWSAMITGLDQQGH 132
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++A+ ++ ++ G+ P+ + VL A + A+++G++LHS A++ E + ES
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESAL 490
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + + +F + + +WN++I+ +Q+G +EA+++F + G + +
Sbjct: 491 MDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSN 550
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+ SV SAC SL + ++H V +K ++D ++LIDMYGKCG ++ A++VF
Sbjct: 551 VTISSVLSACASLPAIYYGKEIHGVV--IKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + N SW S+I Y A GL E++ +M+E G + +HVTF+ ++SAC H G+VQ
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG F M YQI PR H+ CMVDL RAG L++A ++ MP K + IWG L+ A
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C NV++ E ++ L +L+P + G YV++SNI A G W+ V ++R +MK + KIP
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIP 788
Query: 463 AYS 465
YS
Sbjct: 789 GYS 791
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + + A++++ M +G P+ TL L S L G QLH+LAV
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES + +S+Y+K + K+F P L +WN +I+G Q+G +A+
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD VT+VS+ A L ++H Y+ V++ D ++++L+D+
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI--VRNCVHMDVFLVSALVDI 392
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + +A V+ +V ++MI GY NG++ EA+ F Y+ E GIRPN V
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL AC ++ G+ +KN Y E R ++D+ + G L+ + + +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAY--EGRCYVESALMDMYAKCGRLDLSHYIFSKI 510
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + V W ++ + + G
Sbjct: 511 SAK-DEVTWNSMISSFAQNG 529
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+ A WN +IR T + AL Y+ M + LPD +T P V+K+ L A+ +GR
Sbjct: 107 ACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGR 166
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H A LGL+ + F S I +Y+ G AR+VFD ER WN ++ G + G
Sbjct: 167 LVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAG 226
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A+++F ++ G EP+ T+ S + DL +Q+H VK +S+ +
Sbjct: 227 SVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH--TLAVKYGLESEVAV 284
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L+ MY KC +D +K+F + + ++ +W MI G NG ++AL F M++SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHF 347
RP+ VT V +L A +GK
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKEL 370
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 118/213 (55%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + P++AL+++ M GV T+ VL A L A+ G+++H + +
Sbjct: 518 WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI 577
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + ++ F ES I +Y K G+ E A +VF+ PE+ SWN+IIA G KE++
Sbjct: 578 KGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVS 637
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSL 265
+ +++ GF+ D VT +++ SAC G ++ L++ + + +Q+ + + M
Sbjct: 638 LLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACM---- 693
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+Y + G++D A ++ ++ +P+ W +++
Sbjct: 694 VDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 221/413 (53%), Gaps = 33/413 (7%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
A WN +I + R + + ++ M RA + T VL A + L +G Q+H
Sbjct: 125 APVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVH 184
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFE------------------------------- 173
+ G+ ++ E+ + +Y++ GD +
Sbjct: 185 KRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVD 244
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
+AR +FD PER +W A+I G Q GR ++A++ F ++ C D+ TMVSV +AC
Sbjct: 245 RARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACA 304
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LE Y+ ++ K D + N+LIDMY KCG ++ A VF ++ + +W
Sbjct: 305 QLGALETGEWARIYMGRLGIKM--DVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTW 362
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T++I+G A NG EA+D F+ M + P+ VTFVGVL+AC H G V +G+ FF M
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I P HYGC++D+LGRAG L+EA ++ MPMK N IWG L+ +C +GN ++GE
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGE 482
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A+ L EL+P + AY++LSN+YA W++V RIR ++ + + K P S+
Sbjct: 483 LAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCSM 535
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 42/283 (14%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ-----LHSLAVRLGLESNEF 157
++A+ Y+ M G PD YT P +LKA+ + +H+ V+ G+ESN
Sbjct: 33 EEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKFGMESNAH 92
Query: 158 CESGFISLYSKAGDFEKARKVFDENPERKLGS----WNAIIAGLSQDGRAKEAIDMFIGL 213
S I +Y+ GD AR V + G WNA+I+G ++ GR + + F+ +
Sbjct: 93 AASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNRSGRFELSCCSFVDM 152
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
+ VT VSV SACG DL L +QVHK V + S D + N+L+DMY +CG
Sbjct: 153 VRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLE--SGVLPDQRVENALVDMYAECG 210
Query: 274 RMDLAYKVFWEIDQPNVSSWTS-------------------------------MIVGYAA 302
MD A+ +F + +++SWTS MI GY
Sbjct: 211 DMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQ 270
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
G +AL+ F YM+ +R + T V V++AC G ++ G+
Sbjct: 271 VGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGE 313
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 238/448 (53%), Gaps = 37/448 (8%)
Query: 47 HEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
H D + ++ LS C NL Q+ Q++A I + + A N ++ +Y A + A
Sbjct: 50 HYDTKRFRSSLLS-CRNLFQVRQVHAQIATNGAFRNLAVA---NKLLYMYVERGALEDAQ 105
Query: 107 DIYIFMS-------------------------------RAGVLPDCYTLPIVLKASCQLF 135
+++ MS R+G D Y+ P+V++A L
Sbjct: 106 ELFDGMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLK 165
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
L+ GR +H + ++ GL+ F + + +Y++ E A ++F + +R L +W +I
Sbjct: 166 DLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIG 225
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
L++ G E++ F ++ G PD V +V+V AC LG + A +H Y+ +
Sbjct: 226 ALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYI--NGTGY 283
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D ++ ++IDMY KCG ++ A +F + NV +W++MI Y +G +AL+ F
Sbjct: 284 SLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPM 343
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M SGI PN +TFV +L AC H G ++EG+ FF M + Y + P HY CMVDLLGRAG
Sbjct: 344 MLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 403
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
L+EA M+EGMP++ + V+WG L+GAC ++ + E VA+ L +L+ G YV+LSN
Sbjct: 404 RLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSN 463
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPA 463
IYA+ G WE++ + R +M L KIP
Sbjct: 464 IYANAGKWEDMAKTRDLMTKGGLRKIPG 491
>gi|125528144|gb|EAY76258.1| hypothetical protein OsI_04193 [Oryza sativa Indica Group]
Length = 565
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/378 (40%), Positives = 220/378 (58%), Gaps = 8/378 (2%)
Query: 86 AFHWNNIIRLYTRLEAPKKALD---IYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGR 141
AF +N++IR + A D +Y M RAG LP+ +TL LKA + AL GR
Sbjct: 89 AFCYNSLIRALSSAAGVAPAADTVLVYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGR 148
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-PERKLGSWNAIIAGLSQD 200
QLHS A R GLE + + ++G ++LY+K + AR VFD ++ L +W+A+I G S+
Sbjct: 149 QLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRV 208
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G EA+ +F ++ PD+VTMVSV SAC G L+L VH ++ + D
Sbjct: 209 GMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFID--RKGITVDLE 266
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +LIDMY KCG ++ A VF + + + +W++MIVG A +GL AL F M E
Sbjct: 267 LSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELK 326
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+RPN+VTF+GVLSAC H G V EG+ ++ M+ + I+P +YGCMVDL R+ LL+EA
Sbjct: 327 VRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMVDLFCRSSLLDEA 385
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ V GM + N VIW L+ A + + + +K L ELEP + YV+LSN+YAS
Sbjct: 386 YSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASN 445
Query: 441 GLWEEVERIRAVMKHRNL 458
W+ V +R MK N+
Sbjct: 446 SQWDRVSYMRKKMKENNV 463
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++A+ ++ ++ G+ P+ + VL A + A+++G++LHS A++ E + ES
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESAL 490
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + + +F + + +WN++I+ +Q+G +EA+++F + G + +
Sbjct: 491 MDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSN 550
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT+ SV SAC SL + ++H V +K ++D ++LIDMYGKCG ++ A++VF
Sbjct: 551 VTISSVLSACASLPAIYYGKEIHGVV--IKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + N SW S+I Y A GL E++ +M+E G + +HVTF+ ++SAC H G+VQ
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG F M YQI PR H+ CMVDL RAG L++A ++ MP K + IWG L+ A
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C NV++ E ++ L +L+P + G YV++SNI A G W+ V ++R +MK + KIP
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIP 788
Query: 463 AYS 465
YS
Sbjct: 789 GYS 791
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + + A++++ M +G P+ TL L S L G QLH+LAV
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES + +S+Y+K + K+F P L +WN +I+G Q+G +A+
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD VT+VS+ A L ++H Y+ V++ D ++++L+D+
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI--VRNCVHMDVFLVSALVDI 392
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + +A V+ +V ++MI GY NG++ EA+ F Y+ E GIRPN V
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL AC ++ G+ +KN Y E R ++D+ + G L+ + + +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAY--EGRCYVESALMDMYAKCGRLDLSHYIFSKI 510
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + V W ++ + + G
Sbjct: 511 SAK-DEVTWNSMISSFAQNG 529
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 136/266 (51%), Gaps = 4/266 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+ A WN +IR T + AL Y+ M + LPD +T P V+K+ L A+ +GR
Sbjct: 107 ACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGR 166
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H A LGL+ + F S I +Y+ G AR+VFD ER WN ++ G + G
Sbjct: 167 LVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAG 226
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A+++F ++ G EP+ T+ S + DL +Q+H VK +S+ +
Sbjct: 227 SVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLH--TLAVKYGLESEVAV 284
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L+ MY KC +D +K+F + + ++ +W MI G NG ++AL F M++SGI
Sbjct: 285 ANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGI 344
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHF 347
RP+ VT V +L A +GK
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKEL 370
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 118/213 (55%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + P++AL+++ M GV T+ VL A L A+ G+++H + +
Sbjct: 518 WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVI 577
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + ++ F ES I +Y K G+ E A +VF+ PE+ SWN+IIA G KE++
Sbjct: 578 KGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVS 637
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSL 265
+ +++ GF+ D VT +++ SAC G ++ L++ + + +Q+ + + M
Sbjct: 638 LLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACM---- 693
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+Y + G++D A ++ ++ +P+ W +++
Sbjct: 694 VDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
>gi|356529920|ref|XP_003533534.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g15300-like [Glycine max]
Length = 555
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 225/443 (50%), Gaps = 65/443 (14%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN IR ++ P A+ +Y M+ V PD +T P+VLKA +LF + G +H
Sbjct: 72 TFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHG 131
Query: 146 LAVRLGLESNEFCE-------------------------------SGFISLYSKAGDFEK 174
RLG SN S I+ Y++ GD
Sbjct: 132 RVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSV 191
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRA------------------------------- 203
ARK+FDE P+R L SWN +I ++ G
Sbjct: 192 ARKLFDEMPKRDLVSWNVMITAYTKHGEMECARRLFDEAPMKDVVSWNAMVGGYVLHNLN 251
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+EA+++F + + G PD+VTM+S+ SAC LGD +VH + ++ +K K TL+ N
Sbjct: 252 QEALELFDEMCEVGECPDEVTMLSLLSACADLGD--XGEKVHAKIMEL-NKGKLSTLLGN 308
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+DMY KCG + VFW I ++ SW S+I G A +G A E+L F M+ + + P
Sbjct: 309 ALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESLGLFREMQRTKVCP 368
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ +TFVGVL+AC H G V EG +F +MKN Y+IEP H GC+VD+L RAGLL+EA
Sbjct: 369 DEITFVGVLAACSHTGNVDEGNRYFYLMKNKYKIEPNIRHCGCVVDMLARAGLLKEAFDF 428
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ M ++ N ++W L+GAC+ G+V++ + + L + G YV+LSN+YAS G W
Sbjct: 429 IASMKIEPNAIVWRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEW 488
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
+ E +R +M + K S
Sbjct: 489 DGAENVRKLMDDNGVTKTRGSSF 511
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 155/350 (44%), Gaps = 53/350 (15%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y ++AL+++ M G PD T+ +L A L + G ++H+ +
Sbjct: 238 WNAMVGGYVLHNLNQEALELFDEMCEVGECPDEVTMLSLLSACADLG--DXGEKVHAKIM 295
Query: 149 RLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
L + + + + +Y+K G+ K VF ++ + SWN++I GL+ G A+E++
Sbjct: 296 ELNKGKLSTLLGNALVDMYAKCGNIGKGVCVFWLIRDKDMVSWNSVIGGLAFHGHAEESL 355
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +++ PD++T V V +AC G+++ + ++Y + +K+K
Sbjct: 356 GLFREMQRTKVCPDEITFVGVLAACSHTGNVD---EGNRYFYLMKNK------------- 399
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
YK+ +PN+ ++ A GL EA D M+ I PN +
Sbjct: 400 -----------YKI-----EPNIRHCGCVVDMLARAGLLKEAFDFIASMK---IEPNAIV 440
Query: 328 FVGVLSACVHGGKVQEGKHFFE--------------MMKNVYQIEPRFAHYGCMVDLLGR 373
+ +L AC G V+ K E ++ NVY + + L+
Sbjct: 441 WRSLLGACKVHGDVELAKRATEQLLRMRVDQSGDYVLLSNVYASHGEWDGAENVRKLMDD 500
Query: 374 AGLLE-EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
G+ + + VE ++ N V L+GAC +G+V++ + V + L L
Sbjct: 501 NGVTKTRGSSFVEAYRIEPNPVNGRTLLGACIVYGDVELAKRVNEELLRL 550
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 141 RQLHSLAVRLGLESN-----EFCESGFISLYSKAGDF---EKARKVFDENPERKLGSWNA 192
RQ+H+L + G SN + + +S+ A + A ++F + P+ WN
Sbjct: 18 RQIHALMIVNGFTSNVGFLRKLVLTTAMSMVGPAATTAVTQYAVQMFAQIPQPDTFMWNT 77
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
I G SQ A+ ++ + +PD+ T V AC L + VH VF++
Sbjct: 78 YIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNTGSVVHGRVFRLG 137
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
S+ ++ N+L+ + KCG + +A +F + D+ +V +W+++I GYA G + A
Sbjct: 138 FG--SNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQRGDLSVARKL 195
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM--MKNV 354
F M + + V++ +++A G+++ + F+ MK+V
Sbjct: 196 FDEMPKRDL----VSWNVMITAYTKHGEMECARRLFDEAPMKDV 235
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL---AYKVFW 283
S + G+L + + V+ + V +K L+L + + M G + A ++F
Sbjct: 9 STITNLGTLRQIHALMIVNGFTSNVGFLRK---LVLTTAMSMVGPAATTAVTQYAVQMFA 65
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----VHG 338
+I QP+ W + I G + + A+ + M ++P++ TF VL AC V+
Sbjct: 66 QIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMTHRSVKPDNFTFPLVLKACTKLFWVNT 125
Query: 339 GKVQEGKHF-----------------------FEMMKNVYQIEPR--FAHYGCMVDLLGR 373
G V G+ F ++ +++ + + ++ +
Sbjct: 126 GSVVHGRVFRLGFGSNVVVRNTLLVFHAKCGDLKVANDIFDDSDKGDVVAWSALIAGYAQ 185
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
G L AR + + MP K ++V W ++ A K G ++ A+ L + P D
Sbjct: 186 RGDLSVARKLFDEMP-KRDLVSWNVMITAYTKHGEME----CARRLFDEAPMKD 234
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 215/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + + P +AL ++ M D T+ +L+A+ + + GR +H V
Sbjct: 176 WTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYV 235
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G ++ + + S + +Y K G E A KVF+E P R + W ++AG Q + ++A+
Sbjct: 236 EAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDAL 295
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F + P+D T+ SV SAC +G L+ VH+Y+ +K + + +L+D
Sbjct: 296 RAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYI--ECNKINMNVTLGTALVD 353
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +D A +VF + NV +WT +I G A +G A AL+ F M +SGI+PN VT
Sbjct: 354 MYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVT 413
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVL+AC HGG V+EGK FE+MK+ Y ++P HYGCMVD+LGRAG LE+A+ +++ M
Sbjct: 414 FVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNM 473
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PMK + + G L GAC +MGE + L +P G+Y +L+N+Y WE
Sbjct: 474 PMKPSPGVLGALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAA 533
Query: 448 RIRAVMKHRNLAKIPAYS 465
++R +MK + K P YS
Sbjct: 534 QVRKLMKGLRVVKAPGYS 551
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 210/454 (46%), Gaps = 33/454 (7%)
Query: 31 FRKHVTISA--------ASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHS 82
F+KH T+ +S L + +D + T+L +C Q NQ ++ +++
Sbjct: 15 FKKHQTLEQCKQIQSIIVTSGLYSTQDNNTLFLTKLLQCVPFSQ-NQNTCLLLLFDTINT 73
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ + ++ P +L Y + + GV PD +T P++LK F+ I +
Sbjct: 74 PNTRL----LNKMIAACSHPHISLLCYAKLRQKGVQPDKHTFPLLLKT----FSKSIAQN 125
Query: 143 ---LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+++ +LG + + F + I ++ +G E AR+VFDE+P + +W A+I G +
Sbjct: 126 PFMIYAQIFKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVK 185
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ EA+ F+ ++ D VT+ S+ A +GD + VH + + + + D
Sbjct: 186 NDCPGEALKCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEA-GRVQLDG 244
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ ++L+DMY KCG + A KVF E+ +V WT ++ GY + +AL F M
Sbjct: 245 YVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDALRAFWDMLSD 304
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+ PN T VLSAC G + +G+ + ++ +I +VD+ + G ++E
Sbjct: 305 NVAPNDFTLSSVLSACAQMGALDQGRLVHQYIE-CNKINMNVTLGTALVDMYAKCGSIDE 363
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNV--KMGEWVAKHLQELEPWSDGAYVVLSNIY 437
A + E MP+K NV W ++ G+ + + ++P ++ +V +
Sbjct: 364 ALRVFENMPVK-NVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQP-NEVTFVGVLAAC 421
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
+ G EE +R+ +MKH AY L +D
Sbjct: 422 SHGGFVEEGKRLFELMKH-------AYHLKPEMD 448
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 219/378 (57%), Gaps = 15/378 (3%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
T ++ SY+ + + ++ ++R++ LD +S +L
Sbjct: 206 TAIISSYAEKGNMDLVVECFSRMQQLDMKLDSVAMVS-------------ILHGITDPSH 252
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+ IG LH A++ GL+++ +G IS+Y K D E A +F E PE+ L SWN++I+G
Sbjct: 253 MSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISG 312
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
Q GRA +A+ F +K G PD +T+ S+ + C LG L L ++H Y+ +++ +
Sbjct: 313 CVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLGERLHNYI--LRNNLE 370
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
+ + SLIDMY KCG + LA +VF I +P V++W +MI GY+ GL + AL+C+ M
Sbjct: 371 VEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWYGLEHNALNCYSKM 430
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
RE G+ P+ +TF+GVL+AC+HGG + EGK F++M + + P H CMV LLGRAGL
Sbjct: 431 REQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVPNLQHCACMVGLLGRAGL 490
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
EEA ++ M + + +WG L+ AC +K+GE +AK L L+ + G YV++SN+
Sbjct: 491 FEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKLYLLDYKNCGLYVLMSNL 550
Query: 437 YASRGLWEEVERIRAVMK 454
YA+ W + ++R +MK
Sbjct: 551 YAATNRWNDAAKMREIMK 568
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 130/246 (52%), Gaps = 12/246 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC--QLFALEIGRQLHSL 146
WN +I +R AL+I++ + R G P TL + L SC + F + GR +H
Sbjct: 9 WNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTL-VGLVPSCGRREFVFQ-GRSIHGF 66
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G++ + ++ +Y+K+GD E A +F+E ++ + SWN +I + +G E+
Sbjct: 67 GIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFNES 126
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + + E + VT++S+ A S EL +H Y +K+ ++ ++ SL+
Sbjct: 127 MLVFKRMVEQKVEVNPVTIMSLLPANISP---EL---IHCYA--IKTGLINNGSVVTSLV 178
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+Y KCG +LA ++W Q N+ S T++I YA G + ++CF M++ ++ + V
Sbjct: 179 CLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDSV 238
Query: 327 TFVGVL 332
V +L
Sbjct: 239 AMVSIL 244
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+R + SWNA+I G S++G +A+++F+ L + GF P T+V + +CG +
Sbjct: 3 DRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRS 62
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H F +K+ D+ + N+L MY K G ++ A +F E++ +V SW +MI YA N
Sbjct: 63 IHG--FGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G NE++ F M E + N VT + +L A + + Y I+ +
Sbjct: 121 GFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPELIH-----------CYAIKTGLIN 169
Query: 364 YGCMVD----LLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
G +V L + G E A + P K V + + EK GN+ + +
Sbjct: 170 NGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEK-GNMDLVVECFSRM 228
Query: 420 QELEPWSDGAYVV 432
Q+L+ D +V
Sbjct: 229 QQLDMKLDSVAMV 241
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 226/412 (54%), Gaps = 34/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y+R + K+A+D + M G+ PD T+ VL A QL LE+G LH L
Sbjct: 146 WTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVK 205
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQ-------- 199
G+ +E I +Y+K GDF AR+VFD R+ SWNAII G +
Sbjct: 206 EKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVAR 265
Query: 200 -----------------------DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
G+ +EA+ +F+ +++ D+ T+VS+ SAC SLG
Sbjct: 266 SLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLG 325
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L +H + +++ + +D + +L+DMY KCGR++ A VF + + +V +WT+M
Sbjct: 326 ALPQGRALHACI-ELRLVE-TDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAM 383
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A NG+ L+ F+ MR G +PN V+++ VL+AC H + EG+ +F+ M+ +Y
Sbjct: 384 IAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYN 443
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I P+ HYGCM+DLLGR+GLL+EA +V+ MPM+ N VIW ++ AC + + + A
Sbjct: 444 IHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAA 503
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+HL ++EP D YV L NI WE+ +IR +M+ R + K YS T
Sbjct: 504 EHLLKIEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVT 555
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 174/373 (46%), Gaps = 1/373 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+I+ +Y K+A+ M G +P + +L S + ++G Q+H +
Sbjct: 903 WNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVH 962
Query: 149 RLGLE-SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+LG S+ ++ I +Y K F+ + +F+E P L N++I A+
Sbjct: 963 KLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAAL 1022
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + G PDDVT + A L + VK + D + +SLI
Sbjct: 1023 EILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLGFEMDMAVCSSLIT 1082
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y G++ ++ +F + PNV +T++I A G A++ F M SG++P++VT
Sbjct: 1083 AYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKPDNVT 1142
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ ++ C G +EG+ E+M+ +++P H+ CMV+LL R G ++EA M+E
Sbjct: 1143 FLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEMMEQS 1202
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P++ W L+ +C+ G +G+ A L ++ + +SN + G E
Sbjct: 1203 PLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDRETAL 1262
Query: 448 RIRAVMKHRNLAK 460
RI+ + + + K
Sbjct: 1263 RIKEMTNVKEVKK 1275
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 164/377 (43%), Gaps = 71/377 (18%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLK--ASCQLFALEIGRQLHSLAVRLGLESN-EFC 158
P ++ M RA V PD +T + K +S + AL + LH+ +R L S F
Sbjct: 25 PDIPFVLFRRMRRAAVRPDGFTFHFLFKCSSSSRPRAL-LCTMLHAACLRTMLPSAAPFV 83
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG----------------- 201
+ I +Y++ G R+ FDE P + SW +I+GL++ G
Sbjct: 84 ANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDV 143
Query: 202 --------------RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
RAKEA+D F + G PDDVT++ V SAC L DLEL +H
Sbjct: 144 ISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLL 203
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKC--------------------------------GRM 275
V + K S+ L++ +LIDMY KC G +
Sbjct: 204 VKE-KGMSMSENLVV-ALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHV 261
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
D+A +F +++ ++ ++ SMI GY +G EAL F MR +R ++ T V +LSAC
Sbjct: 262 DVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSAC 321
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
G + +G+ ++ + +E ++D+ + G + EA + + M K +V
Sbjct: 322 ASLGALPQGRALHACIE-LRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMG-KRDVHA 379
Query: 396 WGCLMGACEKFGNVKMG 412
W ++ G K G
Sbjct: 380 WTAMIAGLAFNGMGKAG 396
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 28/286 (9%)
Query: 137 LEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
LE GRQLH + ++ G + SN F + + LYS GD K ++ + SWN+I++
Sbjct: 849 LEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILS 908
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+ G KEA+ + G P + VS+ + G GD +L +Q+H V ++
Sbjct: 909 MYADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKL-GFS 967
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
S + +LIDMYGKC D + +F EI + S+I + + AL+ H
Sbjct: 968 CSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSIALECCNSLITSSLGCNMFDAALEILHC 1027
Query: 316 MRESGIRPNHVTFVGV-----------LSAC--VHGGKVQEGKHFFEMMKNVYQIEPRFA 362
M G+ P+ VTF L++C +H V+ G FEM ++
Sbjct: 1028 MIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHSCLVKLG---FEM--DMAVCSSLIT 1082
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
Y C AG L + + EG+ + NV+ + ++ AC ++G+
Sbjct: 1083 AYAC-------AGQLSSSHLIFEGL-LDPNVICFTAIISACARYGD 1120
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 121/300 (40%), Gaps = 6/300 (2%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +I + R +A +Y +M +G+ +T +L AL QLH +
Sbjct: 704 NRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL----QLHGRVLA 759
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LGL N F S ++ Y A +F E P + N ++ GL +E I
Sbjct: 760 LGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGNLKLTEELICC 819
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ +++ E + ++ C G+ LE Q+H V + S+ + NSL+D+
Sbjct: 820 FLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKA-GWIPSNIFLSNSLVDL 878
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y G K +I +V SW S++ YA G EA+ M G P+ +F
Sbjct: 879 YSAIGDSVDTVKALNDILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSVRSF 938
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V +L+ G Q G ++ + ++D+ G+ + + A+ +P
Sbjct: 939 VSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIP 998
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I+ + K+A++ + M G+ D Y VL A L A+ GRQ+H+ +
Sbjct: 235 WSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACII 294
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L+ + + S I +Y K A+ VFD ++ + SW A++ G Q GRA EA+
Sbjct: 295 RTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVK 354
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ G +PD T+ SAC ++ LE Q H + + + NSL+ +
Sbjct: 355 IFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKA--ITAGLIHYITVSNSLVTL 412
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D + ++F E++ + SWT+M+ YA G A EA+ F M + G++P+ VT
Sbjct: 413 YGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTL 472
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
GV+SAC G V++G+ +FE+M N Y I P HY CM+DL R+G +EEA + GMP
Sbjct: 473 TGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP 532
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + + W L+ AC GN+++G+W A+ L EL+P Y +LS+IYAS+G W+ V +
Sbjct: 533 FRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVAQ 592
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK +N+ K P S
Sbjct: 593 LRRGMKEKNVRKEPGQS 609
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 173/368 (47%), Gaps = 47/368 (12%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF--- 179
TL +LK S + +G+Q+H ++LG ES S + +YSK G A+KVF
Sbjct: 138 TLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGL 197
Query: 180 -DENP--------------------------ERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
D N E+ SW+A+I GL+Q+G KEAI+ F
Sbjct: 198 DDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFRE 257
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+K G + D SV ACG LG + Q+H + +++ + + ++LIDMY KC
Sbjct: 258 MKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACI--IRTNLQDHIYVGSALIDMYCKC 315
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
+ A VF + Q NV SWT+M+VGY G A EA+ F M+ SGI P+H T +
Sbjct: 316 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAI 375
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMP 388
SAC + ++EG F + I HY +V L G+ G ++++ + M
Sbjct: 376 SACANISSLEEGSQF-----HGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN 430
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS---RGLWEE 445
++ + V W ++ A +FG + + +L DG V L+ + ++ GL E+
Sbjct: 431 VR-DEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDG--VTLTGVISACSRAGLVEK 487
Query: 446 VERIRAVM 453
+R +M
Sbjct: 488 GQRYFELM 495
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 37/280 (13%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + + YSK+G + + F++ P+R +WN +I G S G A+ +
Sbjct: 66 QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 125
Query: 213 LKKCGFEPD--DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
+ K F + VT++++ S G + L Q+H V +K +S L+ + L+DMY
Sbjct: 126 MMK-DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQV--IKLGFESYLLVGSPLLDMYS 182
Query: 271 KCGRMDLAYKVFWEIDQPNV------------------------------SSWTSMIVGY 300
K G + A KVF+ +D N SW++MI G
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGL 242
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
A NG+ EA++CF M+ G++ + F VL AC G + +G+ + ++
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRT-NLQDH 301
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + L A+ + + M K NVV W ++
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMV 340
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/382 (39%), Positives = 210/382 (54%), Gaps = 7/382 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL +Y M G D +TL VL A L L GRQ H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 149 RLGLESNEFCESGFISLYSKAGD---FEKARKVFDENPERKLGSWNAIIAGLS-QDGRAK 204
+ G N SG I YSK G + KVF E L WN +I+G S + ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSE 327
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN- 263
EA+ F +++ G PDD + V VTSAC +L Q+H +KS S+ + +N
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG--LAIKSNIPSNRISVNN 385
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+LI +Y K G + A +VF + + N S+ MI GYA +G EAL + M +SGI P
Sbjct: 386 ALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAP 445
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N++TFV +LSAC H GKV EG+ +F MK ++IEP HY CM+DLLGRAG LEEA
Sbjct: 446 NNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MP K V W L+GAC K N+ + E AK L ++P + YV+L+N+YA G W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKW 565
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
EE+ +R M+ + + K P S
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCS 587
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 153/325 (47%), Gaps = 10/325 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I Y A+ ++ M G D +TL ++ A C +++ +QLH AV
Sbjct: 108 YNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCD--RVDLIKQLHCFAV 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVF-DENPERKLGSWNAIIAGLSQDGRAKEAI 207
G +S + F++ YSK G +A VF + R SWN++I Q +A+
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + GF+ D T+ SV +A SL L Q H + + Q S + + LID
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH--VGSGLID 283
Query: 268 MYGKCGRMD---LAYKVFWEIDQPNVSSWTSMIVGYAANGL-ANEALDCFHYMRESGIRP 323
Y KCG D + KVF EI P++ W +MI GY+ N + EA+ F M+ G RP
Sbjct: 284 FYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRP 343
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ +FV V SAC + +GK + R + ++ L ++G L +AR +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRV 403
Query: 384 VEGMPMKANVVIWGCLMGACEKFGN 408
+ MP + N V + C++ + G+
Sbjct: 404 FDRMP-ELNAVSFNCMIKGYAQHGH 427
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 120/255 (47%), Gaps = 16/255 (6%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E N F + + Y+K AR++FDENP+ S+N +I+G + A+ +F
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKR 130
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+++ GFE D T+ + +AC ++L Q+H F V S + + N+ + Y K
Sbjct: 131 MRELGFEVDGFTLSGLIAAC--CDRVDLIKQLH--CFAVSGGFDSYSSVNNAFVTYYSKG 186
Query: 273 GRMDLAYKVFWEIDQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
G + A VF+ +D + SW SMIV Y + +AL + M G + + T V
Sbjct: 187 GLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 332 LSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC-MVDLL----GRAGLLEEARAMVE 385
L+A + G+ F +++K + + +H G ++D GR G+ + + E
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFH---QNSHVGSGLIDFYSKCGGRDGMSDSEKVFQE 303
Query: 386 GMPMKANVVIWGCLM 400
+ ++V+W ++
Sbjct: 304 --ILSPDLVLWNTMI 316
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 45/201 (22%)
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCG-------------------------------RM 275
+ VKS S T + N +++Y KCG ++
Sbjct: 31 HALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKDSKI 90
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+A ++F E QP+ S+ ++I GYA A+ F MRE G + T G+++AC
Sbjct: 91 HIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAAC 150
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKA 391
+ + H F + F Y V + GLL EA ++ GM
Sbjct: 151 CDRVDLIKQLHCF-------AVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLR 203
Query: 392 NVVIWGCLMGACEKFGNVKMG 412
+ V W ++ A +G K G
Sbjct: 204 DEVSWNSMIVA---YGQHKEG 221
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 245/467 (52%), Gaps = 63/467 (13%)
Query: 61 CTNLLQLNQIYAHIIRT-HMLHSYSAA----------------------------FHWNN 91
CT + L Q +AH+I++ + S++A+ F WN
Sbjct: 34 CTTMRDLQQFHAHLIKSGQAIESFAASRILAFCASPLGNMDYAYLVFLQMQNPNLFSWNT 93
Query: 92 IIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
+IR +++ P+ AL ++I M + V P T P + KA QL G QLH ++L
Sbjct: 94 VIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGRIIKL 153
Query: 151 GLESNEFCESGFISLYS-------------------------------KAGDFEKARKVF 179
GL+ + F + + +Y+ K G+ +++RK+F
Sbjct: 154 GLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLF 213
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ P + SWN++I G ++G KEA+ +FI +++ +P + TMVS+ +A +G L
Sbjct: 214 DKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALR 273
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+ +H+Y+ K+ + + +++ ++IDMY KCG + A +VF +I ++SSW SMI G
Sbjct: 274 QGVWIHEYI--KKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFG 331
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
A NG EA+ F + S ++P+ ++F+ VL+AC HG V EG FF MKN Y+IEP
Sbjct: 332 LAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEP 391
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
HY MVD++ RAG LEEA ++ MP++ + +IWGCL+ AC +GN +M + A+ +
Sbjct: 392 SIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIWGCLLSACRIYGNTEMAKRAAEKV 451
Query: 420 QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
EL+P YV+++NI+A + R M+ + + K P S
Sbjct: 452 NELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMKKVEKEPGGSF 498
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 219/377 (58%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y R ++ ++ M + G+ PD +T+ +L A LE G+ +H+
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++S+ F + + +Y+K G A VF E + + SWN +I G S++ EA++
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ +P+ +TM + AC SL LE ++H ++ +++ D + N+L+DM
Sbjct: 440 LFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHI--LRNGFSLDRHVANALVDM 496
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + LA +F I + ++ SWT MI GY +G +EA+ F+ MR SGI P+ V+F
Sbjct: 497 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 556
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC H G + EG FF MM+N IEP+ HY C+VDLL RAG L +A ++ MP
Sbjct: 557 ISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP 616
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + IWG L+ C + +VK+ E VA+H+ ELEP + G YV+L+NIYA WEEV++
Sbjct: 617 IEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKK 676
Query: 449 IRAVMKHRNLAKIPAYS 465
+R + R L K P S
Sbjct: 677 LRERIGRRGLRKNPGCS 693
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 168/315 (53%), Gaps = 7/315 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y +K LD++ M G+ D T+ V+ L +GR LH A+
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAI 278
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + +YSK+G+ A +VF+ ER + SW ++IAG +++G + ++
Sbjct: 279 KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD T+ ++ AC G LE VH Y+ + +K +SD + N+L+DM
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE--NKMQSDLFVSNALMDM 396
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG M A+ VF E+ ++ SW +MI GY+ N L NEAL+ F M+ + +PN +T
Sbjct: 397 YAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITM 455
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+L AC ++ G+ +++N + ++ A+ +VD+ + G L AR + + +
Sbjct: 456 ACILPACASLAALERGQEIHGHILRNGFSLDRHVAN--ALVDMYLKCGALGLARLLFDMI 513
Query: 388 PMKANVVIWGCLMGA 402
P K ++V W ++
Sbjct: 514 PEK-DLVSWTVMIAG 527
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 125/233 (53%), Gaps = 4/233 (1%)
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
E ARK+FDE +R + SWN++I+G +G +++ +D+F + G D TMVSV + C
Sbjct: 202 ESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGC 261
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
+ G L L +H Y +K+ + + N L+DMY K G ++ A +VF + + +V S
Sbjct: 262 SNTGMLLLGRALHGYA--IKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
WTSMI GYA GL++ ++ FH M + GI P+ T +L AC G ++ GK +K
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F M D+ + G + +A ++ M +K ++V W ++G K
Sbjct: 380 ENKMQSDLFVSNALM-DMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMIGGYSK 430
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 150/365 (41%), Gaps = 80/365 (21%)
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
++PK L++ + S VL+ L +++ GR++HS+ +E +
Sbjct: 93 QSPKPDLELRTYCS-------------VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
S + +Y GD + R++FD+ K+ WN ++ G ++ G +E++ +F ++
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMR----- 194
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
EL ++ R++ A
Sbjct: 195 -------------------ELGIR------------------------------RVESAR 205
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
K+F E+ +V SW SMI GY +NGL+ + LD F M GI + T V V++ C + G
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTG 265
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ G+ + Y I+ F C++D+ ++G L A + E M ++ VV
Sbjct: 266 MLLLGRAL-----HGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERS-VVS 319
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY--ASRGLWEEVERIRAVM 453
W ++ + G M + H E E S + + + ++ A GL E + + +
Sbjct: 320 WTSMIAGYAREGLSDMSVRLF-HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI 378
Query: 454 KHRNL 458
K +
Sbjct: 379 KENKM 383
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 211/378 (55%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ Y + P+KA+ ++ M G+ P T+ L A L LE G+ +H
Sbjct: 317 WNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVD 376
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+L L S+ + IS+YSK + A +F+ R SWNA+I G +Q+GR EA++
Sbjct: 377 QLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALN 436
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +K G +PD TMVSV A L A +H + ++S + + +L+DM
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI--IRSCLDKNIFVTTALVDM 494
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A K+F I +V +W +MI GY +GL ALD F M++ + PN +T+
Sbjct: 495 YSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITY 554
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ V+SAC H G V EG F+ MK Y +EP HYG MVDLLGRAG ++EA +E MP
Sbjct: 555 LSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMP 614
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + ++G GAC+ N+++GE AK L EL P G +V+L+NIYAS W +V
Sbjct: 615 ISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAE 674
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ + L K P S+
Sbjct: 675 VRKTMEKKGLKKTPGCSV 692
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 166/318 (52%), Gaps = 16/318 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II +++ KKAL++ + M G PD TL VL A+ + L +G+ +H A+
Sbjct: 216 WNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAI 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G + +YSK G E AR +FD ++ + SWN+++ G Q+G ++AI
Sbjct: 276 RAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIA 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G +P VT++ AC LGDLE VHK+V Q+ SD ++NSLI M
Sbjct: 336 VFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQL--NLGSDISVMNSLISM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC R+D+A +F ++ SW +MI+GYA NG +EAL+CF M+ G++P+ T
Sbjct: 394 YSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTM 453
Query: 329 VGVLSACVHGGKVQEGKHFFEMM------KNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
V V+ A + K ++ KN++ +VD+ + G + AR
Sbjct: 454 VSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTT-------ALVDMYSKCGAIHMARK 506
Query: 383 MVEGMPMKANVVIWGCLM 400
+ + M +V+ W ++
Sbjct: 507 LFD-MISDRHVITWNAMI 523
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 135/257 (52%), Gaps = 2/257 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
++ +++ Y + + + AL M V P Y +LK L+ G+++H +
Sbjct: 115 YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLI 174
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+N F +G +++Y+K + A K+FD PER L SWN IIAG SQ+G AK+A++
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + ++ G PD +T+V+V A +G L + +H Y + + + + +L DM
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN--ISTALADM 292
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F +DQ V SW SM+ GY NG +A+ F M E GI P VT
Sbjct: 293 YSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTI 352
Query: 329 VGVLSACVHGGKVQEGK 345
+ L AC G ++ GK
Sbjct: 353 MEALHACADLGDLERGK 369
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 195/308 (63%), Gaps = 2/308 (0%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E N + IS +++ G E+A K+F PE + SWNA+IAG SQ+G+A+ A+ +F
Sbjct: 319 ERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQ 378
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
++ +P+ T V AC +L LE + H+ V ++S +SD L+ N+L+ MY KC
Sbjct: 379 MQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVV--IRSGFQSDVLVGNTLVGMYAKC 436
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G ++ A KVF + Q + +S ++MIVGYA NG + E+L+ F M+ +G++P+ VTFVGVL
Sbjct: 437 GSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVL 496
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC H G V EG+ +F++M Y I P HYGCM+DLLGRAG +EA ++ MP+K +
Sbjct: 497 SACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPD 556
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
+WG L+ AC N+ +GE VA+HL L P + YV+LSNIYA+ G W+++ +R
Sbjct: 557 ADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNR 616
Query: 453 MKHRNLAK 460
MK R + K
Sbjct: 617 MKDRKVKK 624
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 172/341 (50%), Gaps = 39/341 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y R E ++AL + M G+ P+ +T +L A L E+ + H V
Sbjct: 134 WTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDL---EVLGEFHDEIV 190
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ESN F +G + +Y+K G E AR++FD+ P+R + SWNA+IAG Q+G ++A+
Sbjct: 191 KGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALK 250
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK----------------YV---- 248
+F + K D +T ++ + GD+E A+++ + YV
Sbjct: 251 LFQEIPK----RDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGS 306
Query: 249 -------FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
FQ+ ++ + + N++I + + G+++ A K+F + + NV SW +MI GY+
Sbjct: 307 VKEAFKLFQIMPER--NVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYS 364
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPR 360
NG A AL F M+ ++PN TF VL AC +++G E ++++ +Q +
Sbjct: 365 QNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVL 424
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ +V + + G +E+AR + + M + + + ++G
Sbjct: 425 VGN--TLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVG 463
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 162/337 (48%), Gaps = 17/337 (5%)
Query: 76 RTHMLHSYSAAFHWNN-IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
RT+ L + N+ +++ + ++AL I M G+ P T +L+
Sbjct: 18 RTNTLKTKEGTGKGNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNA 77
Query: 135 FALEIGRQLHSLAVRLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+L + LH+ ++ E + + +S+Y K G +AR+VFDE P + + SW A+
Sbjct: 78 KSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAM 137
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
IA ++ +EA+ F ++ G +P+ T S+ AC DLE+ + H + VK
Sbjct: 138 IAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPAC---TDLEVLGEFHDEI--VKG 192
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+S+ + N L+DMY K G ++ A ++F ++ Q +V SW +MI GY NGL +AL F
Sbjct: 193 GFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLF 252
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
+ + + +T+ +++ G V+ FE M E + M+ +
Sbjct: 253 QEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMP-----EQNLVSWNTMIAGYVQ 303
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G ++EA + + MP + NV+ W ++ + G V+
Sbjct: 304 NGSVKEAFKLFQIMPER-NVISWNAVISGFAQNGQVE 339
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 109/213 (51%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ + AL ++ M + P+ T IVL A L LE G + H + +
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVI 415
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G +S+ + + +Y+K G E ARKVFD ++ S +A+I G + +G +KE+++
Sbjct: 416 RSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLE 475
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML---NSL 265
+F ++ G +PD VT V V SAC G ++ Q F + ++ T + +
Sbjct: 476 LFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQ----YFDIMTRFYHITPAMEHYGCM 531
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
ID+ G+ G D A + ++ +P+ W S++
Sbjct: 532 IDLLGRAGCFDEANDLINKMPIKPDADMWGSLL 564
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 9/268 (3%)
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+ ++ L + GR +EA+ + + + G P T S+ C + L A +H ++ Q
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ + + D + N L+ +Y K G + A +VF E+ NV SWT+MI YA + EAL
Sbjct: 93 TQFECQ-DISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEAL 151
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F+ M++ GI+PNH TF +L AC + G+ E++K ++ F G +VD+
Sbjct: 152 GFFYEMQDVGIQPNHFTFASILPACTDLEVL--GEFHDEIVKGGFE-SNVFVGNG-LVDM 207
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
+ G +E AR + + MP + +VV W ++ + G + E K QE+ +
Sbjct: 208 YAKRGCIEFARELFDKMPQR-DVVSWNAMIAGYVQNGLI---EDALKLFQEIPKRDVITW 263
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ YA G E + M +NL
Sbjct: 264 NTMMAGYAQCGDVENAVELFEKMPEQNL 291
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 222/381 (58%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY----TLPIVLKASCQLFALEIGRQLH 144
W+ +I + + +A +++ M G+ C+ ++ L+ L L +G QLH
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGL---CFLSATSVASALRVCASLADLHMGTQLH 330
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG +A FDE + S+ A+++G Q+G+A+
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + +T + NS
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV--IIRGLALETSICNS 448
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG++DL+ +VF ++ +V SW +MI GY +GL EA F M+ G P+
Sbjct: 449 LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPD 508
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +++AC H G V EGKH+F+ M + Y I PR HY CMVDLL R GLL+EA +
Sbjct: 509 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFI 568
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP+KA+V +WG L+GAC N+ +G+ V++ +Q+L P G +V+LSNI+++ G ++
Sbjct: 569 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFD 628
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P YS
Sbjct: 629 EAAEVRIIQKVKGFKKSPGYS 649
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 7/341 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y+ L A+D+Y M R V P+ YT P VLKA L L GR +H+ A
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL ++ F + I LY + F AR VF + P R + +WNA++AG + G AI
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 209 MFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LI 266
+ ++ G P+ T+VS+ G L +H Y + +Q + +++ + L+
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALL 247
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC ++ A +VF + N +W+++I G+ EA + F M G+
Sbjct: 248 DMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSA 307
Query: 327 TFVG-VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T V L C + G ++ I ++ + +AGL+ EA +
Sbjct: 308 TSVASALRVCASLADLHMGTQLHALIAK-SGIHADLTASNSLLSMYAKAGLINEATMFFD 366
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ--ELEP 424
+ +K + + +G L+ C + G + V K +Q +EP
Sbjct: 367 EIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 6/236 (2%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G AR+VFD P ++NA+I S G AID++ + + P+ T V
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC +L DL + + + +D + +LID+Y +C R A VF ++ +
Sbjct: 108 KACSALVDLRAGRTI--HAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQEGK--H 346
V +W +M+ GYA +G+ + A+ M++ G+RPN T V +L G + +G H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + Q E + ++D+ + L A + GMP++ N V W L+G
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSALIGG 280
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 221/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + + P AL +Y M GV+PD TL + + +L R +H
Sbjct: 309 WNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVT 368
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R ++ + I +Y+K G + ARKVF+ P + + SWN++I G SQ+G A EAI
Sbjct: 369 RRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAI 428
Query: 208 DMFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D++ ++ G P+ T VS+ +A LG L+ ++ H + +K+ D + L+
Sbjct: 429 DVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQL--IKNFLYFDIFVSTCLV 486
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCG++ A +F+E+ + SW ++I + +G +A+ F M+ G++P+H+
Sbjct: 487 DMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHI 546
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V EG+ F++M+ Y I P HYGCMVDL GRAG LE+A V+
Sbjct: 547 TFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKN 606
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ +V +WG L+GAC NV++ V+ HL ++E + G YV+LSNIYA G WE V
Sbjct: 607 MPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGV 666
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ +R++ + R L K P +S
Sbjct: 667 DEVRSLARDRGLKKTPGWS 685
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 182/369 (49%), Gaps = 39/369 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +AL+++ M V D T+ +L QL + G +H A+
Sbjct: 208 WNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAI 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LGLE + F + I++Y+K G+ A +F++ R + SWN+++A Q+ + A+
Sbjct: 268 KLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALG 327
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ + G PD +T+VS+ S LG+ + +H +V + + D + N++IDM
Sbjct: 328 VYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTR-RCWFLHDIALGNAIIDM 386
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVT 327
Y K G +D A KVF + +V SW S+I GY+ NGLANEA+D + MR SG PN T
Sbjct: 387 YAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGT 446
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V +L+A G +++G K +++KN + + C+VD+ G+ G L +A ++
Sbjct: 447 WVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS--TCLVDMYGKCGKLADALSLFYE 504
Query: 387 MPMKANV----------------------------------VIWGCLMGACEKFGNVKMG 412
+P +++V + + L+ AC G V G
Sbjct: 505 VPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEG 564
Query: 413 EWVAKHLQE 421
+W + +QE
Sbjct: 565 QWCFQLMQE 573
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 161/322 (50%), Gaps = 7/322 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN++I Y R+ A+D + F+S + + D YT P V++A L + GR++H
Sbjct: 107 YTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNL---DDGRKVHC 163
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L ++LG E + + + FI YS+ G A +FD R +G+WNA+I+G +G+ E
Sbjct: 164 LVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAE 223
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F ++ D VT+ S+ C L D+ + +H V+ +K + D + N+L
Sbjct: 224 ALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIH--VYAIKLGLEFDLFVCNAL 281
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I+MY K G + A +F ++ ++ SW S++ + N AL ++ M G+ P+
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDL 341
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+T V + S G + + A ++D+ + G ++ AR + E
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401
Query: 386 GMPMKANVVIWGCLMGACEKFG 407
G+P+K +V+ W L+ + G
Sbjct: 402 GLPVK-DVISWNSLITGYSQNG 422
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+ + +QLH+L V G + F + I+ Y+ GD AR FD+ + + +WN++I+
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 197 LSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
++ G A+D F F + D T V ACG+L D +VH V +K
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLV--LKLGF 170
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D + S I Y + G + LA +F + ++ +W +MI G+ NG EAL+ F
Sbjct: 171 ECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDE 230
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE--PRFAHYGC--MVDLL 371
MR + + VT +L CV + G ++ +VY I+ F + C ++++
Sbjct: 231 MRFKSVSMDSVTISSLLPICVQLDDIISG-----VLIHVYAIKLGLEFDLFVCNALINMY 285
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ G L A + M ++ ++V W L+ A E+
Sbjct: 286 AKFGELRSAETIFNQMKVR-DIVSWNSLLAAFEQ 318
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/381 (36%), Positives = 222/381 (58%), Gaps = 9/381 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY----TLPIVLKASCQLFALEIGRQLH 144
W+ +I + + +A +++ M G+ C+ ++ L+ L L +G QLH
Sbjct: 274 WSALIGGFVLCDRMTEAFNLFKDMLVEGL---CFLSATSVASALRVCASLADLHMGTQLH 330
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L + G+ ++ + +S+Y+KAG +A FDE + S+ A+++G Q+G+A+
Sbjct: 331 ALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAE 390
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA +F ++ C EPD TMVS+ AC L L+ H V + +T + NS
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV--IIRGLALETSICNS 448
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG++DL+ +VF ++ +V SW +MI GY +GL EA F M+ G P+
Sbjct: 449 LIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPD 508
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+ +++AC H G V EGKH+F+ M + Y I PR HY CMVDLL R GLL+EA +
Sbjct: 509 DVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFI 568
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP+KA+V +WG L+GAC N+ +G+ V++ +Q+L P G +V+LSNI+++ G ++
Sbjct: 569 QSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFD 628
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E +R + K + K P YS
Sbjct: 629 EAAEVRIIQKVKGFKKSPGYS 649
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 7/341 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y+ L A+D+Y M R V P+ YT P VLKA L L GR +H+ A
Sbjct: 68 YNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAA 127
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL ++ F + I LY + F AR VF + P R + +WNA++AG + G AI
Sbjct: 128 AAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 187
Query: 209 MFIGLKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LI 266
+ ++ G P+ T+VS+ G L +H Y + +Q + +++ + L+
Sbjct: 188 HLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALL 247
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC ++ A +VF + N +W+++I G+ EA + F M G+
Sbjct: 248 DMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSA 307
Query: 327 TFVG-VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T V L C + G ++ I ++ + +AGL+ EA +
Sbjct: 308 TSVASALRVCASLADLHMGTQLHALIAK-SGIHADLTASNSLLSMYAKAGLINEATMFFD 366
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ--ELEP 424
+ +K + + +G L+ C + G + V K +Q +EP
Sbjct: 367 EIAVK-DTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEP 406
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 6/236 (2%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G AR+VFD P ++NA+I S G AID++ + + P+ T V
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC +L DL + + + +D + +LID+Y +C R A VF ++ +
Sbjct: 108 KACSALVDLRAGRTI--HAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQEGK--H 346
V +W +M+ GYA +G+ + A+ M++ G+RPN T V +L G + +G H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + Q E + ++D+ + L A + GMP++ N V W L+G
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVR-NDVTWSALIGG 280
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/378 (38%), Positives = 216/378 (57%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + E PK+A+ I+ M GV P ++ L A L LE GR +H L+V
Sbjct: 305 WNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L L+ N + IS+Y K + + A +F + R + SWNA+I G +Q+GR EA++
Sbjct: 365 ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALN 424
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ +PD T VSV +A L A +H V +++ + + +L+DM
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVV--MRNCLDKNVFVTTALVDM 482
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A +F + + +V++W +MI GY +G+ AL+ F M++ IRPN VTF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTF 542
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ V+SAC H G V+ G F MMK Y IEP HYG MVDLLGRAG L EA + MP
Sbjct: 543 LSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K V ++G ++GAC+ NV E VA+ L EL P G +V+L+NIY + +WE+V +
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQ 662
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M + L K P S+
Sbjct: 663 VRVSMLRQGLRKTPGCSM 680
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 181/388 (46%), Gaps = 50/388 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y++ + AL++ M + P T+ VL A L + IG+++H A+
Sbjct: 204 WNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAM 263
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G +S + + +Y+K G + AR +FD ER + SWN++I Q+ KEA+
Sbjct: 264 RAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMV 323
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +P DV+++ AC LGDLE +HK V+ + + ++NSLI M
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK--LSVELELDRNVSVVNSLISM 381
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC +D A +F ++ + SW +MI+G+A NG EAL+ F M+ ++P+ T+
Sbjct: 382 YCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTY 441
Query: 329 VGVLSAC-----------VHG------------------------GKVQEGKHFFEMMKN 353
V V++A +HG G + + F+MM
Sbjct: 442 VSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS- 500
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM---PMKANVVIWGCLMGACEKFGNVK 410
E + M+D G G+ + A + E M ++ N V + ++ AC G V+
Sbjct: 501 ----ERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVE 556
Query: 411 MGEWVAKHLQE---LEPWSD--GAYVVL 433
G ++E +EP D GA V L
Sbjct: 557 AGLKCFHMMKENYSIEPSMDHYGAMVDL 584
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 145/282 (51%), Gaps = 8/282 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+ +++ + ++ KAL ++ M V P Y +LK L +G+++H L V
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + F +G ++Y+K +ARKVFD PER L SWN I+AG SQ+G A+ A++
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
M + + +P +T+VSV A +L + + ++H Y +++ S + +L+DM
Sbjct: 223 MVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYA--MRAGFDSLVNIATALVDM 280
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A +F + + NV SW SMI Y N EA+ F M + G++P V+
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340
Query: 329 VGVLSACVHGGKVQEGKHF------FEMMKNVYQIEPRFAHY 364
+G L AC G ++ G+ E+ +NV + + Y
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMY 382
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 148/306 (48%), Gaps = 32/306 (10%)
Query: 111 FMSRAGVLP-DCYTLPI-VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
F+S+ +P + Y P +L C +L+ R + L + GL ++ +SL+ +
Sbjct: 24 FLSQRNYIPANVYEHPAALLLERCS--SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCR 81
Query: 169 AGDFEKARKVFDENPERKLGS-WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
G ++A +VF E ++KL + ++ G ++ +A+ F+ ++ EP
Sbjct: 82 YGSVDEAARVF-EPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTY 140
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ 287
+ CG +L + ++H + VKS D + L +MY KC ++ A KVF + +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLL--VKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPE 198
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------V 336
++ SW +++ GY+ NG+A AL+ + M E ++P+ +T V VL A +
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEI 258
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
HG ++ G F+ + N+ +VD+ + G L+ AR + +GM ++ NVV W
Sbjct: 259 HGYAMRAG---FDSLVNIAT---------ALVDMYAKCGSLKTARLLFDGM-LERNVVSW 305
Query: 397 GCLMGA 402
++ A
Sbjct: 306 NSMIDA 311
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 9/182 (4%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C SL +L H K+ + L L+ ++ + G +D A +VF ID+
Sbjct: 47 CSSLKELR-----HILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNV 101
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+ +M+ G+A ++AL F MR+ + P F +L C +++ GK ++
Sbjct: 102 LYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 352 -KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
K+ + ++ FA G + ++ + + EAR + + MP + ++V W ++ + G +
Sbjct: 162 VKSGFSLD-LFAMTG-LENMYAKCRQVHEARKVFDRMPER-DLVSWNTIVAGYSQNGMAR 218
Query: 411 MG 412
M
Sbjct: 219 MA 220
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + ++AL + M A V P+ T+ VL A L +LE+G+ + S
Sbjct: 227 WNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVR 286
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G N + + +YSK G+ ARK+FD ++ + WN +I G +EA+
Sbjct: 287 DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALV 346
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-VKSKQKSDTLML-NSLI 266
+F + + P+DVT ++V AC SLG L+L VH Y+ + +K + + L S+I
Sbjct: 347 LFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSII 406
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY KCG +++A +VF + +++SW +MI G A NG A AL F M G +P+ +
Sbjct: 407 VMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDI 466
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFVGVLSAC G V+ G +F M Y I P+ HYGCM+DLL R+G +EA+ ++
Sbjct: 467 TFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGN 526
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M M+ + IWG L+ AC G V+ GE+VA+ L ELEP + GAYV+LSNIYA G W++V
Sbjct: 527 MEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDV 586
Query: 447 ERIRAVMKHRNLAKIPA 463
+IR + + + K+P
Sbjct: 587 AKIRTKLNDKGMKKVPG 603
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 172/372 (46%), Gaps = 72/372 (19%)
Query: 43 FLDTHEDPAKIVATQ-----LSKCTNLLQLNQIYAHIIRT-------------------- 77
FL + + P K++ L+KC ++ L QI++ II++
Sbjct: 12 FLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSP 71
Query: 78 -----------HMLHSYSA-AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
H +H F WN +IR ++ P +L ++ M +G+ P+ +T P
Sbjct: 72 SRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFP 131
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD-------FEK---- 174
+ K+ + A +QLH+ A++L L + + I +YS+ G+ F+K
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191
Query: 175 --------------------ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
AR++FDE P + + SWNA+IAG Q GR +EA+ F ++
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCG 273
+ P+ TMVSV SACG L LEL + + V+ + L L N+L+DMY KCG
Sbjct: 252 EADVSPNQSTMVSVLSACGHLRSLELGKWIGSW---VRDRGFGKNLQLVNALVDMYSKCG 308
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
+ A K+F ++ +V W +MI GY L EAL F M + PN VTF+ VL
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLP 368
Query: 334 ACVHGGKVQEGK 345
AC G + GK
Sbjct: 369 ACASLGALDLGK 380
>gi|449494077|ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 231/413 (55%), Gaps = 13/413 (3%)
Query: 62 TNLLQLNQIYAHIIRTHMLH-----SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
T LL+L I + ++ LH Y + WN +IR P A+ Y M+ +
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASN 96
Query: 117 VLP--DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
L D T LKA + A QLHS +R G ++ ++ + Y+K GD +
Sbjct: 97 GLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDL 156
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACG 233
A+K+FDE P+ + SWNA+IAG +Q R +AI F +K G P+ VT+ AC
Sbjct: 157 AQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACS 216
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSS 292
LG L+ VHKY+ V+ K S+ + N +IDMY KCG MD AY VF + ++ +
Sbjct: 217 QLGALKEGESVHKYI--VEEKLDSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLIT 274
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI+ +A +G ++ALD F + SG+ P+ V+++ VL AC H G V++G F M
Sbjct: 275 WNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMT 334
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+EP HYG MVDLLGRAG L+EA +V +P N+V+W L+GAC +G+V+M
Sbjct: 335 Q-RGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMA 392
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E ++ L E+ S G +V+LSN+YA+R W++V R+R M+ R++ K P +S
Sbjct: 393 ELASRKLVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFS 445
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 218/405 (53%), Gaps = 35/405 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + P KALD++ M GV P+ T+ V+ A + L +GR++
Sbjct: 311 WNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYID 370
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKAR-------------------------------K 177
R + N + I ++ K G+ E AR
Sbjct: 371 RNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARD 430
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACGSL 235
+FD P + + +WN +I+G Q GR KEA+ +F + L K G PD VT++S SAC L
Sbjct: 431 IFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQL 490
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G +++ +H Y+ K + + + + SLIDMY K G ++ A +VF I +V W++
Sbjct: 491 GAMDIGEWIHGYI--KKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSA 548
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI G A +G A++ F M+E+ ++PN VTF +L AC H G V EGK F+ M+ VY
Sbjct: 549 MIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVY 608
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ P+ HY CMVD+LGRAG LEEA +EGMP+ + +WG L+GAC GN+++ E
Sbjct: 609 GVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKA 668
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
L E+EP + GAYV+LSN+YA G WE V +R M+ L K
Sbjct: 669 CSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKK 713
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 219/488 (44%), Gaps = 92/488 (18%)
Query: 50 PAKIVATQL------SKCTNLLQLNQIYAHIIRTHMLHSYSAA----------------- 86
PA AT + +CT+ QL QI+A ++RT+ LH AA
Sbjct: 132 PASATATNVGDRALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDY 191
Query: 87 -------------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASC 132
+ WN +IR P +++ ++I M P+ +T P+++KA
Sbjct: 192 ARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVA 251
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSW 190
+ +G+ +H +A++ + F + I Y+ G + A VF+ E + + SW
Sbjct: 252 ERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSW 311
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
N+++ G Q G +A+D+F ++ G P+ VTMVSV SAC +L L +V Y+
Sbjct: 312 NSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYI-- 369
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA--------- 301
+++ + + N+ IDM+ KCG +++A +F +++ +V SWT++I GYA
Sbjct: 370 DRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIAR 429
Query: 302 ----------------------ANGLANEALDCFHYMR--ESGIRPNHVTFVGVLSACVH 337
+G EAL F ++ +SG RP+ VT + LSAC
Sbjct: 430 DIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQ 489
Query: 338 GGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
G + G+ H + + K Q+ A ++D+ ++G +E+A + + K +V +
Sbjct: 490 LGAMDIGEWIHGY-IKKERIQLNRNLA--TSLIDMYSKSGDVEKAIEVFHSIGNK-DVFV 545
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS----------RGLWEE 445
W ++ G + + +QE + + V +N+ + + L++E
Sbjct: 546 WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNS--VTFTNLLCACSHSGLVDEGKRLFDE 603
Query: 446 VERIRAVM 453
+ER+ V+
Sbjct: 604 MERVYGVV 611
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 223/387 (57%), Gaps = 4/387 (1%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
HS +N ++ Y +A+ ++ M+ GV + TL ++ A LE+
Sbjct: 111 FHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLEL 170
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G LH ++ G +S+ + FI++Y K G A+K+FDE P + L SWNA+++G +Q
Sbjct: 171 GSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ 230
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK-SKQKSD 258
+G A ++++ + G PD VT+V V S+C +LG + H+ F+++ S S+
Sbjct: 231 NGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG---HEVEFKIQASGFTSN 287
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ N+LI+MY +CG + A VF + + + SWT++I GY +G A+ F M
Sbjct: 288 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 347
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
SGI P+ FV VLSAC H G +G +F+MMK YQ+EP HY CMVDLLGRAG L+
Sbjct: 348 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 407
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA+ ++E MP+K + +WG L+GAC+ NV++ E + + ELEP + G YV+LSNIY+
Sbjct: 408 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYS 467
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + V RIR +MK + L K P S
Sbjct: 468 NANNSKGVLRIRIMMKEKKLKKDPGCS 494
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 201/391 (51%), Gaps = 30/391 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLA 147
WN +R + +AL +Y M R G P+ +T P LK SC +L I G Q H
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALK-SCAALSLPILGSQFHGQI 75
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-PERKLG-SWNAIIAGLSQDGRAKE 205
++G F ++G IS+Y K + ARKVF+EN RKL +NA+++G + + E
Sbjct: 76 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSE 135
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH----KYVFQVKSKQKSDTLM 261
A+ +F + + G + VT++ + AC S +LEL +H KY F SD +
Sbjct: 136 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFD------SDVSV 189
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+N I MY KCG ++ A K+F E+ + SW +M+ GYA NGLA L+ + M +G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ VT VGVLS+C + G G F++ + + P + ++++ R G L +A
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTKA 307
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL-----EPWSDG-AYVVLS 434
+A+ +GMP + +V W ++G +G GE + +E+ EP DG A+V +
Sbjct: 308 QAVFDGMPERT-LVSWTAIIGG---YGMHGHGEIAVQLFKEMIRSGIEP--DGTAFVCVL 361
Query: 435 NIYASRGLWEE-VERIRAVMKHRNLAKIPAY 464
+ + GL ++ +E + + ++ L P +
Sbjct: 362 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 392
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 256/485 (52%), Gaps = 37/485 (7%)
Query: 8 ISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASS--FLDTHEDPAKIVATQLS--KCTN 63
+ L ++ KS H + + KT + + TI+ +S + + I LS + +
Sbjct: 12 VPLQNILTKSQHQ--NPIIKTQSLSQEGTITPQNSPNRFCSEKKYGHICDLLLSQTRSRS 69
Query: 64 LLQLNQIYAHIIRT----------HMLHSYS------------------AAFHWNNIIRL 95
LL+ QI+AHII++ ++++ YS ++ W+++I
Sbjct: 70 LLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISS 129
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
+ + E P A+ + M + PD + P KA L ++G+ +H L ++ G + +
Sbjct: 130 FAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVD 189
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
F S + +Y+K GD ++AR VFDE P R + SW+ +I G +Q G +EA+ +F
Sbjct: 190 VFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALL 249
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G + +D T+ SV CGS LEL Q+H F K+ + +SLI +Y KCG +
Sbjct: 250 EGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCF--KTSYDLSGFVGSSLISLYSKCGLI 307
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+ AY+VF E+ N+ W +M++ A + EA D F M +G+RPN +TF+ VL AC
Sbjct: 308 EGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYAC 367
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
H G V+EGK +F +MK Y+IEP HY MVDLLGRAG L+EA ++++GMP + +
Sbjct: 368 SHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESV 426
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKH 455
WG + C GN + + A + EL S G +V+LSN YA+ G +E+ + R +++
Sbjct: 427 WGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRD 486
Query: 456 RNLAK 460
R + K
Sbjct: 487 RGVKK 491
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 216/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I R + AL + M + D YTLP VL + + ++ +H L +
Sbjct: 9 WNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLII 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E+ + + I +Y+K G + A VF + ++ + SW +++ G S +G +EAI
Sbjct: 69 KTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIK 128
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD + + SV SAC L ++ Q+H + VKS +S + NSL+ M
Sbjct: 129 LFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATL--VKSGLESSLSVDNSLVTM 186
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A + F + +V SWT++IVGYA NG +L + M +G +P+++TF
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITF 246
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G + G+ +FE M VY I+P HY CM+DLLGR+G L EA+ ++ M
Sbjct: 247 IGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV 306
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V+W L+ AC +++GE AK+L ELEP + YV+LSN+Y++ G WE+ R
Sbjct: 307 VAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAAR 366
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +M+ R + K P YS
Sbjct: 367 IRRLMRSRGICKEPGYS 383
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 207/347 (59%), Gaps = 2/347 (0%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T+ ++ A QL LE G+ LHS + LGL+ N + + +Y K D E A++V
Sbjct: 9 PDEVTMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEV 68
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+ E+ + SW ++++GL++ G +E++ +F ++ EPD++T+V V SAC G L
Sbjct: 69 FNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQTGAL 128
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ +H + K + D ++ +L+DMY KCG +DLA +VF + NV +W +MI
Sbjct: 129 DQGKYIHLLI--DKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMIG 186
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A +G +A+ F M + P+ VTF+ +L AC H G V EG F+ MKN +QIE
Sbjct: 187 GLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIE 246
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGC+VDLL RA +++A A +E MP+KAN V+W L+GAC G+ + E + +
Sbjct: 247 PRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIXRR 306
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP S G YV+LSN+YA W+ ++R MK++ + K P S
Sbjct: 307 VIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCS 353
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 152/362 (41%), Gaps = 66/362 (18%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
M+SLVP + + L LLH K ++++++ A LD + K
Sbjct: 14 MVSLVP--ACAQLGNLERGKLLHSYSKELGLDENLSVNNA--ILDMY-----------CK 58
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C ++ +++ I +L W +++ + +++L ++ M + PD
Sbjct: 59 CDDIESAQEVFNRIREKDVLS-------WTSMLSGLAKSGYFQESLALFRKMQLHKIEPD 111
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
TL VL A Q AL+ G+ +H L + + + E+ + +Y+K G + A +VF
Sbjct: 112 EITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFR 171
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG--DL 238
R + +WNA+I GL+ G ++AI +F ++ PDDVT +++ AC G D
Sbjct: 172 RMRVRNVFTWNAMIGGLAMHGHGEDAISLFDQMEXDKLMPDDVTFIALLCACSHAGLVDE 231
Query: 239 ELAL-QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LA+ Q K FQ++ + + ++D+ + ++D
Sbjct: 232 GLAMFQAMKNKFQIEPRMEH----YGCVVDLLCRARKVD--------------------- 266
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
D ++ I+ N V + +L AC GG + ++ + V ++
Sbjct: 267 -------------DALAFIENMPIKANSVLWATLLGACRSGGHFDLAE---KIXRRVIEL 310
Query: 358 EP 359
EP
Sbjct: 311 EP 312
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 228/412 (55%), Gaps = 35/412 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + +++ +KAL +Y M ++ + P+ + +L A Q ++E GRQ HSL
Sbjct: 291 FSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSL 350
Query: 147 AVRLGLESNEFCESGFISLY-------------------------------SKAGDFEKA 175
V+ G +F ++ IS Y +K G ++A
Sbjct: 351 IVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQA 410
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R++FD PE+ + SW+ +I+G +Q+ A+D+F G+ EP+++TMVSV SA +L
Sbjct: 411 RQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAAL 470
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--PNVSSW 293
G L H+YV K +D L ++IDMY KCG +D A VF +I VS W
Sbjct: 471 GKLPEGRWAHEYVCN-KVIPLNDNLS-AAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPW 528
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I G A +G AN +L+ F ++ I+ N +TF+GVLSAC H G V+ G+ +F MK
Sbjct: 529 NAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKT 588
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ +EP HYGC+VDLLGR G L EA +V MPMKA+VVIWG L+ + G V++GE
Sbjct: 589 QHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGE 648
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A++L L+P V+LSN+YA GLWE+ +R ++ + + + P YS
Sbjct: 649 RAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYS 700
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A++++ M AGV P+ T+ V+ A + + R LH+L ++L + +
Sbjct: 176 EAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLL 235
Query: 164 SLYS-------------------------------KAGDFEKARKVFDENPERKLGSWNA 192
+Y K+G ++AR++F+ PER + SW
Sbjct: 236 HMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAI 295
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+I G Q R ++A+ ++ ++K P++V +V + SACG +E Q H + VK
Sbjct: 296 MIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLI--VK 353
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAY-------------------------------KV 281
+ + ++I Y C R+DLAY ++
Sbjct: 354 NGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQI 413
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + +V SW++MI GYA N L + ALD FH M +S + PN +T V V SA GK+
Sbjct: 414 FDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKL 473
Query: 342 QEGKHFFEMMKN-VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-IWGCL 399
EG+ E + N V + + ++D+ + G ++ A + + K + V W +
Sbjct: 474 PEGRWAHEYVCNKVIPLNDNLS--AAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAI 531
Query: 400 MGACEKFGNVKMGEWVAKHLQE 421
+ G+ + + +LQ
Sbjct: 532 ICGLAMHGHANLSLEIFSNLQR 553
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 152/357 (42%), Gaps = 91/357 (25%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG------------------------- 170
A+ G+Q+H++ ++ G SN F + I++Y K G
Sbjct: 76 AISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMS 135
Query: 171 ------DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
E AR++F + PER S+ +I GL+Q+ EAI++F ++ G P++VT
Sbjct: 136 GYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVT 195
Query: 225 MVSVTSACGSLGDL-------ELALQVHKY--------------VFQVKSKQK------- 256
M SV SAC +G + L +++H + VF K
Sbjct: 196 MASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMP 255
Query: 257 -SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+T+ N ++ Y K G +D A ++F I + +V SW MI G+ +AL +
Sbjct: 256 VRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSA 315
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-KNVY------------------Q 356
MR+S + PN V V +LSAC ++EG+ F ++ KN + +
Sbjct: 316 MRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRR 375
Query: 357 IEPRFAHY-----------GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
I+ + Y M+ + G++++AR + + MP K +V W ++
Sbjct: 376 IDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK-DVFSWSTMISG 431
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 54/278 (19%)
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD-DVTMVSVTSACGSLGDLELALQVHKYV 248
W + + + R + + F+ + D ++++VS C S + Q+H V
Sbjct: 28 WVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDCELSVVSALKYCASSSAISSGQQIHAIV 87
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCG-------------------------------RMDL 277
+K S+T +LNSLI+MY KCG +++
Sbjct: 88 --LKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLEN 145
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F ++ + S+T+MI+G A N EA++ F MR +G+ PN VT V+SAC H
Sbjct: 146 ARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSH 205
Query: 338 GGKVQEGK---------HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G + + HFF ++ I H C+ L++ + + MP
Sbjct: 206 IGGIWNCRMLHALVIKLHFFGLV----LISTNLLHMYCVF------SSLKDTKRLFNEMP 255
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
++ N V W ++ K G V + + + E + +S
Sbjct: 256 VR-NTVSWNVMLKGYVKSGLVDQARELFERIPERDVFS 292
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 221/378 (58%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + AL++ M +A V P+ T +L+ ALE G+++H +
Sbjct: 217 WTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYII 276
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + I++Y K G E+ARK+F + P R + +W A++ G +Q G EAI+
Sbjct: 277 QSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAIN 336
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G +PD +T SV ++C S L+ ++H+ + V + D + ++L+ M
Sbjct: 337 LFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL--VHAGYNLDVYLQSALVSM 394
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA-NGLANEALDCFHYMRESGIRPNHVT 327
Y KCG MD A VF ++ + NV +WT++I G A +G EAL+ F M++ GI+P+ VT
Sbjct: 395 YAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVT 454
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F VLSAC H G V+EG+ F M Y I+P HY C VDLLGRAG LEEA ++ M
Sbjct: 455 FTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM 514
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P +WG L+ AC +V+ GE A+++ +L+P DGAYV LS+IYA+ G +E+ E
Sbjct: 515 PFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAE 574
Query: 448 RIRAVMKHRNLAKIPAYS 465
++R VM+ R++ K P S
Sbjct: 575 KVRQVMEKRDVVKEPGQS 592
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 181/354 (51%), Gaps = 14/354 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +++ I +++ W +I + +A Y M AG
Sbjct: 93 AKCGSLTDARRVFDSIRDRNIVS-------WTAMIEAFVAGNKNLEAFKCYETMKLAGCK 145
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T +L A L++G+++H V GLE + + +Y+K GD KAR +
Sbjct: 146 PDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVI 205
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD PE+ + +W +IAG +Q G+ A+++ +++ P+ +T S+ C + L
Sbjct: 206 FDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAAL 265
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E +VH+Y+ Q S + ++NSLI MY KCG ++ A K+F ++ +V +WT+M+
Sbjct: 266 EHGKKVHRYIIQ--SGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVT 323
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV-YQI 357
GYA G +EA++ F M++ GI+P+ +TF VL++C +QEGK + + + Y +
Sbjct: 324 GYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL 383
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM-GACEKFGNVK 410
+ +V + + G +++A + M + NVV W ++ G C + G +
Sbjct: 384 DVYLQ--SALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIITGCCAQHGRCR 434
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 12/285 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ +L +LE GR++H+ ++ G++ N + E+ +S+Y+K G AR+VFD +R
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I + EA + +K G +PD VT VS+ +A + L+L +VH
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ V++ + + + SL+ MY KCG + A +F + + NV +WT +I GYA G
Sbjct: 173 EI--VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQV 230
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH--- 363
+ AL+ M+++ + PN +TF +L C ++ GK Y I+ +
Sbjct: 231 DVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHR-----YIIQSGYGRELW 285
Query: 364 -YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++ + + G LEEAR + +P + +VV W ++ + G
Sbjct: 286 VVNSLITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVTGYAQLG 329
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 219/378 (57%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + P A++I+ M V T+ L A L +E GR +H L
Sbjct: 345 WNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLD 404
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+L L S+ + IS+YSK + A ++F+ + L SWNA+I G +Q+GR EAID
Sbjct: 405 QLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAID 464
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ +PD TMVSV A L L A +H V +++ + + +L+DM
Sbjct: 465 YFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLV--IRTCLDKNVFVATALVDM 522
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K+F +D+ +V++W +MI GY +GL AL+ F M++ I+PN VTF
Sbjct: 523 YAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTF 582
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC H G V+EG +F MK Y +EP HYG MVDLLGRA L EA ++ MP
Sbjct: 583 LCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMP 642
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + ++G ++GAC NV++GE A + +L+P G +V+L+NIYA+ +W++V R
Sbjct: 643 IEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVAR 702
Query: 449 IRAVMKHRNLAKIPAYSL 466
+R M+ + + K P +S+
Sbjct: 703 VRTTMEKKGIQKTPGWSV 720
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 172/362 (47%), Gaps = 45/362 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y + K AL++ + M G PD T+ +L A + +L IGR +H ++
Sbjct: 244 WNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSM 303
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G ES + + +YSK G AR +FD + + SWN++I G Q+G A++
Sbjct: 304 RAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAME 363
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + E +VT++ AC LGD+E VHK + Q+ + SD ++NSLI M
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQL--ELGSDVSVMNSLISM 421
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC R+D+A ++F + + SW +MI+GYA NG NEA+D F M+ I+P+ T
Sbjct: 422 YSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTM 481
Query: 329 VGVLSAC-----------VHG------------------------GKVQEGKHFFEMMKN 353
V V+ A +HG G V + F+MM
Sbjct: 482 VSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD- 540
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVK 410
E + M+D G GL + A + E M +K N V + C++ AC G V+
Sbjct: 541 ----ERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVE 596
Query: 411 MG 412
G
Sbjct: 597 EG 598
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 55/472 (11%)
Query: 2 LSLVPGISLSSLRMKSSHPL----LHRLCKTHTFRK-----------HVTISAASSFLDT 46
+S+ P I S R SSHPL L R+ H T S+ +++ +
Sbjct: 15 ISISPPIPESKRRRMSSHPLSFTPLRRIPTNTLPLPPPPPPSPTSNLHRTPSS-RTYIPS 73
Query: 47 H--EDPAKIVATQLSKCTNLLQLNQIYAHIIRTHM-------------------LHSYSA 85
H + P+ I+ L CT++ +L+Q II+ + LH +
Sbjct: 74 HVYKHPSAIL---LELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAAR 130
Query: 86 AFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
F ++ +++ Y R + A+ + M GV P Y +LK
Sbjct: 131 VFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNAD 190
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L G+++H + G SN F +G +++Y+K E+A K+FD PER L WN II+G
Sbjct: 191 LRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISG 250
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+Q+G K A+++ + +++ G PD +T+VS+ A +G L + +H Y +++ +
Sbjct: 251 YAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGY--SMRAGFE 308
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
S + +L+DMY KCG + A +F + V SW SMI GY NG A++ F M
Sbjct: 309 SFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKM 368
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+ + +VT +G L AC G V++G+ +++ + ++ + ++ + +
Sbjct: 369 MDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQL-ELGSDVSVMNSLISMYSKCKR 427
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFG--NVKMGEWVAKHLQELEPWS 426
++ A + E + K +V W ++ + G N + + LQ ++P S
Sbjct: 428 VDIAAEIFENLQHKT-LVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDS 478
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 238/448 (53%), Gaps = 42/448 (9%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK---ALDIYI 110
VA + C+N L YA+ + TH + N +IR + L+ P A+ +Y
Sbjct: 50 VAKFIEACSNAGHLR--YAYSVFTH--QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
+ PD +T P VLK + ++ + GRQ+H V G +S+ +G I +Y G
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 171 DFEKARKVFDENPERKLGSWNA---------------------------------IIAGL 197
ARK+FDE + + WNA +I+G
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
++ GRA EAI++F + EPD+VT+++V SAC LG LEL ++ YV + ++
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH-RGMNRA 284
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+L N++IDMY K G + A VF +++ NV +WT++I G A +G EAL F+ M
Sbjct: 285 VSLN-NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
++G+RPN VTF+ +LSAC H G V GK F M++ Y I P HYGCM+DLLGRAG L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EA +++ MP KAN IWG L+ A ++++GE L +LEP + G Y++L+N+Y
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ G W+E +R +MK + K+ S
Sbjct: 464 SNLGRWDESRMMRNMMKGIGVKKMAGES 491
>gi|449446363|ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 231/413 (55%), Gaps = 13/413 (3%)
Query: 62 TNLLQLNQIYAHIIRTHMLH-----SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
T LL+L I + ++ LH Y + WN +IR P A+ Y M+ +
Sbjct: 37 TKLLELCAISSFGDLSYALHIFRYIPYPSTNDWNAVIRGTALSSDPANAVFWYRAMAASN 96
Query: 117 VLP--DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
L D T LKA + A QLHS +R G ++ ++ + Y+K GD +
Sbjct: 97 GLHRIDALTCSFALKACARALARSEAIQLHSQLLRFGFNADVLLQTTLLDAYAKIGDLDL 156
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACG 233
A+K+FDE P+ + SWNA+IAG +Q R +AI F +K G P+ VT+ AC
Sbjct: 157 AQKLFDEMPQPDIASWNALIAGFAQGSRPADAIMTFKRMKVDGNLRPNAVTVQGALLACS 216
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSS 292
LG L+ VHKY+ V+ K S+ + N +IDMY KCG MD AY VF + ++ +
Sbjct: 217 QLGALKEGESVHKYI--VEEKLNSNVQVCNVVIDMYAKCGSMDKAYWVFENMRCDKSLIT 274
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI+ +A +G ++ALD F + SG+ P+ V+++ VL AC H G V++G F M
Sbjct: 275 WNTMIMAFAMHGDGHKALDLFEKLGRSGMSPDAVSYLAVLCACNHAGLVEDGLKLFNSMT 334
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+EP HYG MVDLLGRAG L+EA +V +P N+V+W L+GAC +G+V+M
Sbjct: 335 Q-RGLEPNIKHYGSMVDLLGRAGRLKEAYDIVSSLPF-PNMVLWQTLLGACRTYGDVEMA 392
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E ++ L E+ S G +V+LSN+YA+R W++V R+R M+ R++ K P +S
Sbjct: 393 ELASRKLVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTPGFS 445
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II+ Y E P +A+ ++ M + + PDC TL + QL + R + +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G + + + +Y+K G + AR VF+ P + SWN II+G +Q+G A EAI
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 208 DMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+M+ +++ G + T VSV AC G L +++H + +K+ D ++ SL
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL--LKNGLYLDVFVVTSLA 493
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCGR++ A +F++I + N W ++I + +G +A+ F M + G++P+H+
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V EG+ FEMM+ Y I P HYGCMVD+ GRAG LE A ++
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M ++ + IWG L+ AC GNV +G+ ++HL E+EP G +V+LSN+YAS G WE V
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGV 673
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ IR++ + L K P +S
Sbjct: 674 DEIRSIAHGKGLRKTPGWS 692
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 15/324 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN +I Y R + + + +FM +G+ PD T P VLKA + G ++H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LA++ G + + + I LYS+ AR +FDE P R +GSWNA+I+G Q G AKE
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ + GL+ D VT+VS+ SAC GD + +H Y +K +S+ + N L
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSY--SIKHGLESELFVSNKL 288
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
ID+Y + GR+ KVF + ++ SW S+I Y N A+ F MR S I+P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 326 VTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T + + S G ++ + F + K + + + +V + + GL++ ARA+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN--AVVVMYAKLGLVDSARAV 406
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+P +V+ W ++ + G
Sbjct: 407 FNWLP-NTDVISWNTIISGYAQNG 429
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 160/320 (50%), Gaps = 11/320 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL +S D T+ +L A + G +HS ++
Sbjct: 219 WNAMISGYCQSGNAKEALT----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES F + I LY++ G +KVFD R L SWN+II + + AI
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD +T++S+ S LGD+ V + + K D + N+++ M
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-KGWFLEDITIGNAVVVM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y K G +D A VF + +V SW ++I GYA NG A+EA++ ++ M E G I N T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V VL AC G +++G K ++KN ++ + D+ G+ G LE+A ++
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV--TSLADMYGKCGRLEDALSLFYQ 511
Query: 387 MPMKANVVIWGCLMGACEKF 406
+P + N V W L+ AC F
Sbjct: 512 IP-RVNSVPWNTLI-ACHGF 529
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L+ + LH+ V N + ++LY G+ AR FD R + +WN +I+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 197 LSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+ G + E I F + + G PD T SV AC ++ D ++H +K
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH--CLALKFGF 181
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + SLI +Y + + A +F E+ ++ SW +MI GY +G A EAL
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 316 MRESGIRP-NHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLG 372
+G+R + VT V +LSAC G G H + + + +E ++DL
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK---HGLESELFVSNKLIDLYA 293
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
G L + + + + M ++ +++ W ++ A E
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKAYE 324
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
V SKQ + + L+++Y G + LA F I +V +W MI GY G ++E +
Sbjct: 78 VVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVI 137
Query: 311 DCFH-YMRESGIRPNHVTFVGVLSAC---VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
CF +M SG+ P++ TF VL AC + G K+ F M +VY
Sbjct: 138 RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVA-------AS 190
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++ L R + AR + + MP++ ++ W ++ + GN K ++ L+ ++
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAMD 246
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 236/448 (52%), Gaps = 42/448 (9%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIR---LYTRLEAPKKALDIYI 110
VA + C+N L YA+ + TH + + N +IR L A A+ +Y
Sbjct: 50 VAKFIEACSNAGHLR--YAYSVFTH--QPFPNTYLHNTMIRALSLVDERNAHSIAITVYR 105
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
PD +T P VLK ++ + GRQ+H AV G +S+ +G I +YS G
Sbjct: 106 KFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCG 165
Query: 171 DFEKARKVFDENPERKLGSWNA---------------------------------IIAGL 197
ARKVFDE R + WNA +I+G
Sbjct: 166 GLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGY 225
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
++ GRA EAI++F + +PD+VT+++V SAC LG LEL ++ YV + ++
Sbjct: 226 ARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDH-RGMNRA 284
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+L N++IDMY K G + A +VF +++ NV +WT++I G A +G EAL F M
Sbjct: 285 VSLN-NAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGHGAEALVMFDRMV 343
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
++G++PN VTF+ +LSAC H G V G FF M++ Y I P HYGCM+DLLGRAG L
Sbjct: 344 KAGVKPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKL 403
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EA +++ MP ++N IWG L+ A ++ +GE L +LEP + G Y++L+N+Y
Sbjct: 404 REAEEVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLY 463
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ G W+E +R +MK + K+ S
Sbjct: 464 SNLGRWDESRMMRKMMKGIGVKKLAGES 491
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 213/377 (56%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P+KA++ Y M GV+PD T+ VL A L L+ G LH A
Sbjct: 365 WTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL S + I +YSK +KA +VF P + + SW +II GL + R+ EA+
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL- 483
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +P+ VT+VSV SAC +G L ++H + +++ D + N+L+DM
Sbjct: 484 FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHA--LRTGLGFDGFLPNALLDM 541
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGRM+ A+ F ++ +V+SW ++ GYA G A++ FH M ES + P+ +TF
Sbjct: 542 YVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L AC G V +G +FE M++ + I P HY +VDLLGRAG LE+A ++ MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + IWG L+ AC + NV++GE A+H+ E++ S G Y++L N+YA G W+EV R
Sbjct: 661 IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVAR 720
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ L P S
Sbjct: 721 VRKIMRENRLTVDPGCS 737
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 4/314 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + +AL++Y M G+ PD YT P VL+ L L GR++H
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+R G ES+ + I++Y K GD AR VFD P R SWNA+I+G ++ E
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +++ +PD +TM SV SAC +LGD L +VH YV +K+ ++ + NSLI
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYV--IKTGFVAEVSVNNSLI 338
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
M+ G D A VF +++ ++ SWT+MI GY NGL +A++ + M G+ P+ +
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T VLSAC G + +G E + ++D+ + +++A +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457
Query: 387 MPMKANVVIWGCLM 400
+P K NV+ W ++
Sbjct: 458 IPNK-NVISWTSII 470
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 20/273 (7%)
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+ + + L VRLG + +S++ + GD +A VF + ER L SWN ++ G +
Sbjct: 120 VSKTVTRLGVRLG--------NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G EA++++ + G PD T V CG L DL +VH +V ++ +SD
Sbjct: 172 KAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHV--IRYGFESD 229
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
++N+LI MY KCG + A VF + + + SW +MI GY N + E L F MRE
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRA 374
+ P+ +T V+SAC G + G+ + Y I+ F ++ +
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREV-----HGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
G +EA + M K ++V W ++ EK G
Sbjct: 345 GCWDEAEMVFSKMEFK-DLVSWTAMISGYEKNG 376
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 232/409 (56%), Gaps = 12/409 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +YA + M S W +I Y++ + P+ AL + M R G+
Sbjct: 61 AKCGDL-----VYARKLFDEM--SSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLK 113
Query: 119 PDCYTLPIVLKASCQLFALEI--GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
P+ +TL +LKA+ + + ++ GRQLH L +R G +SN + + +Y++ E+A+
Sbjct: 114 PNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQ 173
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+FD + SWNA+IAG ++ G+ +A +F + + +P T SV AC S+G
Sbjct: 174 LIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMG 233
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE VH +K +K + N+L+DMY K G ++ A KVF + + +V SW SM
Sbjct: 234 SLEQGKWVH--ALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSM 291
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
+ GY+ +GL AL F M + I PN +TF+ VL+AC H G + EG+H+F+MMK Y
Sbjct: 292 LTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YN 350
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+EP+ +HY MVDLLGRAG L+ A + MP+K +WG L+GAC N+++G + A
Sbjct: 351 VEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAA 410
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + EL+ G +V+L NIYA G W + ++R +MK + K PA S
Sbjct: 411 ECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKESGVKKEPACS 459
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 148/296 (50%), Gaps = 7/296 (2%)
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
+ AG C+TL LK L L G+ +H+L + + ++ ++LY+K GD
Sbjct: 10 NNAGAREICHTL---LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDL 66
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
ARK+FDE R + +W A+I G SQ R ++A+ + + + G +P+ T+ S+ A
Sbjct: 67 VYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAA 126
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
+G ++ + ++ S+ + +++DMY +C ++ A +F + N S
Sbjct: 127 SGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS 186
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W ++I GYA G ++A F M ++P H T+ VL AC G +++GK +M
Sbjct: 187 WNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALM- 245
Query: 353 NVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ E A G ++D+ ++G +E+A+ + + + K +VV W ++ + G
Sbjct: 246 -IKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHG 299
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 209/357 (58%), Gaps = 14/357 (3%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLK----ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
IY F+ V D + L ++ A C A+E R++ +VR N F + +
Sbjct: 237 IYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKM---SVR-----NLFVSTAMV 288
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
S YSKAG + AR +FD+ + L W +I+ ++ +EA+ +F + G +PD V
Sbjct: 289 SGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVV 348
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
TM+SV SAC +LG L+ A VH+Y + +S + N+LI+MY KCG +D A VF
Sbjct: 349 TMLSVISACVNLGTLDKAKWVHRYTHL--NGLESVLPIDNALINMYAKCGGLDAARDVFE 406
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
++ NV SW+SMI +A +G A+++L F M++ + PN VTFVGVL C H G V+E
Sbjct: 407 KMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEE 466
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
GK F M + Y I P+ HYGCMVDL GRA LL EA ++E MPM NVVIWG LM AC
Sbjct: 467 GKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSAC 526
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
G +++GE AK + +LEP DGA V++SNIYA W+ V IR +M+ + + K
Sbjct: 527 RVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFK 583
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 215/467 (46%), Gaps = 71/467 (15%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRT-----------------------HMLHSYSA-- 85
A + +LS C +L + Q++AHI+RT + L+ +S+
Sbjct: 15 ANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSIS 74
Query: 86 ----AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+ +N+++R +R P+ + Y + G D + P +LKA ++ AL G
Sbjct: 75 PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGM 134
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+LH A ++ S+ F E+G + +Y+ G AR VFDE +R + +WN +I + G
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFG 194
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EA +F +K PD++ + ++ SACG G++ + Y F +++ + DT +
Sbjct: 195 LLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI--YDFLIENDVRMDTHL 252
Query: 262 LNSLIDMYG-------------------------------KCGRMDLAYKVFWEIDQPNV 290
L +L+ MY K GR+D A +F + + ++
Sbjct: 253 LTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDL 312
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
WT+MI YA + EAL F M SGI+P+ VT + V+SACV+ G + + K H +
Sbjct: 313 VCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRY 372
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + + P ++++ + G L+ AR + E MP + NVV W ++ A G
Sbjct: 373 THLNGLESVLPI---DNALINMYAKCGGLDAARDVFEKMPTR-NVVSWSSMINAFAMHGE 428
Query: 409 V--KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
+ + + +EP ++ +V + + GL EE ++I A M
Sbjct: 429 ASDSLSLFAQMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASM 474
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 110/220 (50%), Gaps = 8/220 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P++AL ++ M +G+ PD T+ V+ A L L+ + +H
Sbjct: 315 WTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTH 374
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLES ++ I++Y+K G + AR VF++ P R + SW+++I + G A +++
Sbjct: 375 LNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLS 434
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN---SL 265
+F +K+ EP++VT V V C G +E K +F + + + T + +
Sbjct: 435 LFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEG----KKIFASMTDEYNITPKIEHYGCM 490
Query: 266 IDMYGKCGRMDLAYKVFWEIDQ-PNVSSWTSMIVGYAANG 304
+D++G+ + A +V + PNV W S++ +G
Sbjct: 491 VDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHG 530
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 217/386 (56%), Gaps = 3/386 (0%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
L S W ++I Y R +A+ ++ M R GV PD +T+ VL A +LE
Sbjct: 58 LMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN 117
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ +H+ ++SN F + + +Y+K G E A VF E P + + SWN +I G S+
Sbjct: 118 GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSK 177
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ EA+ +F G +PD T+ + AC SL L+ +VH ++ +++ SD
Sbjct: 178 NSLPNEALSLF-GDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHI--LRNGFFSDQ 234
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N+L+DMY KCG LA +F I ++ +WT MI GY +G N A+ F+ MR++
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
GI P+ V+F+ +L AC H G + EG FF +M++ ++P+ HY C+VDLL R+G L
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A ++ MP++ + IWG L+ C +VK+ E VA+H+ ELEP + G YV+L+N YA
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAE 414
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
WEEV+++R + R L K P S
Sbjct: 415 AEKWEEVKKLRQKIGRRGLKKNPGCS 440
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 167/332 (50%), Gaps = 12/332 (3%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLE-SNEFCESGFISLYSKAGDFEKARKVFDENPER 185
+L+A + +GR +H V+ + FC + + +Y+K G + A VFD R
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNT-LLDMYAKCGVLDGAILVFDLMSVR 62
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+ +W ++IA +++G + EAI +F + + G PD T+ +V AC G LE VH
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
Y+ + + +S+ + N+L+DMY KCG M+ A VF E+ ++ SW +MI GY+ N L
Sbjct: 123 NYIRE--NDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHY 364
NEAL F M ++P+ T +L AC + GK +++N + + + A+
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVAN- 238
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG--ACEKFGNVKMGEWVAKHLQEL 422
+VD+ + G+ AR + + +P K +++ W ++ FGN + + +
Sbjct: 239 -ALVDMYVKCGVPVLARLLFDMIPTK-DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296
Query: 423 EPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
EP + +++ + + GL +E R VM+
Sbjct: 297 EP-DEVSFISILYACSHSGLLDEGWRFFNVMQ 327
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 94/181 (51%), Gaps = 4/181 (2%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
MVS+ AC + GD+ L VH VK+ T N+L+DMY KCG +D A VF
Sbjct: 1 MVSILQACANCGDVSLGRAVHGS--GVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDL 58
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ V +WTS+I YA GL++EA+ FH M G+ P+ T VL AC G ++ G
Sbjct: 59 MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
K ++ ++ ++D+ + G +E+A ++ MP+K +++ W ++G
Sbjct: 119 KDVHNYIRE-NDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYS 176
Query: 405 K 405
K
Sbjct: 177 K 177
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 248/466 (53%), Gaps = 24/466 (5%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
++S++P +S +LR+ S +H F V IS A + +K
Sbjct: 239 IVSVLPAVS--ALRLISVGKEIHGYAMRSGFDSLVNISTA-------------LVDMYAK 283
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C +L Q++ ++ +++ WN++I Y + E PK+A+ I+ M GV P
Sbjct: 284 CGSLETARQLFDGMLERNVVS-------WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
++ L A L LE GR +H L+V LGL+ N + IS+Y K + + A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ R L SWNA+I G +Q+GR +A++ F ++ +PD T VSV +A L
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
A +H V ++S + + +L+DMY KCG + +A +F + + +V++W +MI GY
Sbjct: 457 AKWIHGVV--MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+G AL+ F M++ I+PN VTF+ V+SAC H G V+ G F MMK Y IE
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
HYG MVDLLGRAG L EA + MP+K V ++G ++GAC+ NV E A+ L
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 421 ELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
EL P G +V+L+NIY + +WE+V ++R M + L K P S+
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 39/332 (11%)
Query: 45 DTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL----E 100
+ +E PA ++ L +C++L +L QI + + + Y F ++ L+ R E
Sbjct: 34 NVYEHPAALL---LERCSSLKELRQILPLVFKNGL---YQEHFFQTKLVSLFCRYGSVDE 87
Query: 101 APK---------------------------KALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
A + KAL ++ M V P Y +LK
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L +G+++H L V+ G + F +G ++Y+K +ARKVFD PER L SWN I
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
+AG SQ+G A+ A++M + + +P +T+VSV A +L + + ++H Y ++S
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA--MRS 265
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
S + +L+DMY KCG ++ A ++F + + NV SW SMI Y N EA+ F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
M + G++P V+ +G L AC G ++ G+
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 111 FMSRAGVLP-DCYTLPI-VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
F+S +P + Y P +L C +L+ RQ+ L + GL F ++ +SL+ +
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCS--SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
G ++A +VF+ + ++ ++ G ++ +A+ F+ ++ EP +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
CG +L + ++H + VKS D + L +MY KC +++ A KVF + +
Sbjct: 142 LKVCGDEAELRVGKEIHGLL--VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VH 337
++ SW +++ GY+ NG+A AL+ M E ++P+ +T V VL A +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G ++ G F+ + N+ +VD+ + G LE AR + +GM ++ NVV W
Sbjct: 260 GYAMRSG---FDSLVNIST---------ALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 398 CLMGA 402
++ A
Sbjct: 307 SMIDA 311
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 220/377 (58%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + E ++A++++ M R VLP+ +TL +L+A L L++G Q+H V
Sbjct: 315 WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVV 374
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+ N F + + +Y+K G E + ++F E+P SWN +I G Q G ++A+
Sbjct: 375 KVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALI 434
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + +C + +VT SV AC + LE Q+H VK+ +T++ N+LIDM
Sbjct: 435 LFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS--LSVKTIYDKNTVVGNALIDM 492
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + + SW +MI GY+ +GL EAL F M E+ +P+ VTF
Sbjct: 493 YAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTF 552
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC + G + G+ +F+ M Y IEP HY CMV LLGR+G L++A +V +P
Sbjct: 553 VGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIP 612
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +V++W L+ AC +V++G A+ + E+EP + +V+LSNIYA+ W V
Sbjct: 613 FEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVAS 672
Query: 449 IRAVMKHRNLAKIPAYS 465
IR MK + + K P S
Sbjct: 673 IRTSMKRKGIRKEPGLS 689
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 161/321 (50%), Gaps = 6/321 (1%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y W ++ Y E +++L ++ M G P+ +T VLKA L +G+
Sbjct: 208 YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKA 267
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H A + F I LY K+GD + A +VF+E P+ + W+ +IA +Q +
Sbjct: 268 VHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQ 327
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
++EAI+MF +++ P+ T+ S+ AC SL DL+L Q+H +V VK + +
Sbjct: 328 SEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHV--VKVGLDMNVFVS 385
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+L+DMY KCGRM+ + ++F E SW ++IVGY G +AL F M E ++
Sbjct: 386 NALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQ 445
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
VT+ VL AC ++ G + +K +Y + ++D+ + G +++AR
Sbjct: 446 GTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN--ALIDMYAKCGNIKDAR 503
Query: 382 AMVEGMPMKANVVIWGCLMGA 402
+V M + + V W ++
Sbjct: 504 -LVFDMLREHDQVSWNAMISG 523
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 149/330 (45%), Gaps = 17/330 (5%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
++ YS ++ I L++RL+ L+ ++F + VLK +
Sbjct: 116 LIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFST-------------VLKLLVSAEWAK 162
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+G +H+ +LG +S+ F + I YS G E AR+VFD + + SW ++A
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
++ +E++ +F ++ GF+P++ T SV AC L + VH F K+ +
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAF--KTSYLEE 280
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ LID+Y K G +D A +VF E+ + +V W+ MI YA + + EA++ F MR
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ PN T +L AC +Q G + V F M D+ + G +E
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALM-DMYAKCGRME 399
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + P +V W ++ + GN
Sbjct: 400 NSLQLFSESPNCTDVS-WNTVIVGYVQAGN 428
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ LH ++ G + F + ++ Y K A K+FDE P+R S+ +I G SQ
Sbjct: 63 GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQ 122
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
R EAI +F L+ G E + +V S +L VH V+++ SD
Sbjct: 123 CLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFD--SDA 180
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +LID Y CG + A +VF I+ ++ SWT M+ Y N E+L F MR
Sbjct: 181 FVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIV 240
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G +PN+ TF VL ACV GK +E F ++DL ++G +++
Sbjct: 241 GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE-LIDLYIKSGDVDD 299
Query: 380 ARAMVEGMPMKANVVIWGCLMG 401
A + E MP K +V+ W ++
Sbjct: 300 ALQVFEEMP-KDDVIPWSFMIA 320
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 187/305 (61%), Gaps = 2/305 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+S + G + A +VFD P SW A+I G ++GR EAID F + EPD
Sbjct: 144 MVSGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPD 203
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
VT+++V SAC +G L L + VH+ V + + + + NSLIDMY +CG++ LA +V
Sbjct: 204 YVTLIAVVSACAEVGALGLGMWVHRLVL--RQGLERNVRVANSLIDMYARCGQVKLAAQV 261
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F I + V SW SMIVG AANGL EA++ F MR G +P+ VT GVL+AC H G
Sbjct: 262 FHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLT 321
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ G ++++M Y I R HYGC+VDLLGRAG L+EA +VE MPM+ N V+ G L+
Sbjct: 322 EHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLA 381
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
C G++ M E + +HL EL+P D YV+LSNIYA+ G W+ ++R++MK R + K
Sbjct: 382 GCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKR 441
Query: 462 PAYSL 466
P +S+
Sbjct: 442 PGHSI 446
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 128/274 (46%), Gaps = 44/274 (16%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + +A+D + M V PD TL V+ A ++ AL +G +H L +
Sbjct: 172 WTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVL 231
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GLE N + I +Y++ G + A +VF +R + SWN++I GL+ +G EAI+
Sbjct: 232 RQGLERNVRVANSLIDMYARCGQVKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIE 291
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSL 265
+F +++ GF+PD VT+ V +AC G E L+ + + + + ++ + +
Sbjct: 292 LFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEH----YGCV 347
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+D+ G+ GR+D + H + +RPN
Sbjct: 348 VDLLGRAGRLD----------------------------------EAMHVVETMPMRPNE 373
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
V +L+ C G + + ++M+++++++P
Sbjct: 374 VVLGALLAGCRMHGDLDMAE---QLMQHLFELDP 404
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 112/251 (44%), Gaps = 38/251 (15%)
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACG----SLGDL 238
R + SW + IA ++ G A + P+DVT+++V SAC S
Sbjct: 30 RDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLAR 89
Query: 239 ELALQVHKYV----------------FQVKSK------QKSDTLML------NSLIDMYG 270
LAL +H F + S+ Q DT+ + N+++
Sbjct: 90 PLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGLM 149
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
+ G +D A++VF + P+ SWT++I G+ NG +EA+DCF M + P++VT +
Sbjct: 150 RNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVEPDYVTLIA 209
Query: 331 VLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
V+SAC G + G + ++ + R A+ ++D+ R G ++ A + +
Sbjct: 210 VVSACAEVGALGLGMWVHRLVLRQGLERNVRVAN--SLIDMYARCGQVKLAAQVFHSI-R 266
Query: 390 KANVVIWGCLM 400
K VV W ++
Sbjct: 267 KRTVVSWNSMI 277
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 223/379 (58%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + + P A ++ M G PD TL + Q + R +H +
Sbjct: 385 WNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIM 444
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G L + + + +Y+K G + A KVF+ P + + SWN +I G +Q+G A EAI
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAI 504
Query: 208 DMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++ +++C P+ T VS+ A +G L+ +++H V +K+ D + LI
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRV--IKTNLHLDVFVATCLI 562
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGKCGR+ A +F+++ Q + +W ++I + +G A + L F M + G++P+HV
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V+EGK F +M+ Y I+P HYGCMVDLLGRAG LE A ++
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKD 681
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG L+GAC GN+++G++ + L E++ + G YV+LSNIYA+ G WE V
Sbjct: 682 MPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGV 741
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+++R++ + R L K P +S
Sbjct: 742 DKVRSLARERGLKKTPGWS 760
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 190/377 (50%), Gaps = 13/377 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALD-IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN++I Y +A+ Y + + + PD YT P VLKA L GR++H
Sbjct: 183 YAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHC 239
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A +LG + N F + I +YS+ G AR +FD+ P R +GSWNA+I+GL Q+G A +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+D+ ++ G + + VT+VS+ C LGD+ A+ +H YV +K + D + N+L
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV--IKHGLEFDLFVSNAL 357
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I+MY K G ++ A K F ++ +V SW S+I Y N A F M+ +G +P+
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 326 VTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T V + S + + H F M + + + +VD+ + GLL+ A +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN--AVVDMYAKLGLLDSAHKV 475
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW--SDGAYVVLSNIYASRG 441
E +P+K +V+ W L+ + G V K ++E + + G +V + YA G
Sbjct: 476 FEIIPVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 534
Query: 442 LWEEVERIRAVMKHRNL 458
++ +I + NL
Sbjct: 535 ALQQGMKIHGRVIKTNL 551
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 18/289 (6%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
LH+L V G + F + ++LY+ GD +R FD+ P++ + +WN++I+ +G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 197
Query: 203 AKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EAI F L PD T V ACG+L D ++H + F++ + + +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQW--NVFV 252
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
SLI MY + G +A +F ++ ++ SW +MI G NG A +ALD MR GI
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI----EPRFAHYGCMVDLLGRAGLL 377
+ N VT V +L C G + M+ ++Y I E ++++ + G L
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTA-----MLIHLYVIKHGLEFDLFVSNALINMYAKFGNL 367
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGN--VKMGEWVAKHLQELEP 424
E+AR + M +VV W ++ A E+ + G +V L +P
Sbjct: 368 EDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 217/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y KKAL+++ + ++G D TL KA L L+ G+Q+H+ A+
Sbjct: 1075 WNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAI 1134
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +S+ SG + +Y K GD A VF+ +W ++I+G +G +A+
Sbjct: 1135 KAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALR 1194
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ +++ PD+ T ++ A + LE Q+H V +K SD + SL+DM
Sbjct: 1195 IYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV--IKLDCVSDPFVGTSLVDM 1252
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ AY++F +++ N++ W +M+VG A +G A EA++ F M+ GI P+ V+F
Sbjct: 1253 YAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSF 1312
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+LSAC H G E + M N Y IEP HY C+VD LGRAGL++EA ++E MP
Sbjct: 1313 IGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 1372
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
KA+ I L+GAC G+V+ G+ VA L LEP+ AYV+LSNIYA+ W++V
Sbjct: 1373 FKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 1432
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK +N+ K P +S
Sbjct: 1433 ARKMMKRKNVKKDPGFS 1449
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 170/323 (52%), Gaps = 5/323 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF-ALEIGRQLHSLA 147
WN++I + +++++++I + G+ PD +TL VL+A L L I RQ+H A
Sbjct: 973 WNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHA 1032
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ G ++ F + I +YSK+G E+A +F + L WNA++ G K+A+
Sbjct: 1033 LKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKAL 1092
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + K G + D +T+ + ACG L L+ Q+H + +K+ SD + + ++D
Sbjct: 1093 ELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHA--IKAGFDSDLHVNSGILD 1150
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG M A VF I P+ +WTSMI G NG ++AL +H MR+S + P+ T
Sbjct: 1151 MYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYT 1210
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F ++ A +++G+ + + + F +VD+ + G +E+A + + M
Sbjct: 1211 FATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGT-SLVDMYAKCGNIEDAYRLFKKM 1269
Query: 388 PMKANVVIWGCLMGACEKFGNVK 410
++ N+ +W ++ + GN +
Sbjct: 1270 NVR-NIALWNAMLVGLAQHGNAE 1291
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 143/269 (53%), Gaps = 3/269 (1%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
+Q+ A+ + + F WN + A++ ++ M+ + D TL +V
Sbjct: 851 DQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
L A LE+G+Q+H +AV+ GL+S+ + +++YSK G AR+VF++ L
Sbjct: 911 LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHK 246
SWN++I+ +Q +E++++FI L G +PD T+ SV AC SL D L ++ Q+H
Sbjct: 971 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIH- 1029
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V +K+ +D+ + +LID+Y K G+M+ A +F D +++ W +M+ GY
Sbjct: 1030 -VHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+AL+ F + +SG + + +T AC
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKAC 1117
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ + L +G+ H+ V G + F + +++YSK G AR+VFD PER
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 187 LGSWNAIIAGL-----SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
L +WNAI+ S DG A+E + +F L+ +T+ V C + G L A
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
VH Y ++ + D + +L+++Y KCGRM A +F + + +V W M+ GY
Sbjct: 747 EGVHGYAIKIGLEW--DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 804
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
GL EA F SG+RP+ + +L+
Sbjct: 805 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNG 837
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 156/398 (39%), Gaps = 57/398 (14%)
Query: 17 SSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIR 76
S+H LL C TH R V+ SA FL + + T SKC +L Q++
Sbjct: 633 STHNLLLGKC-THA-RIVVSGSAGDHFLSNN------LLTMYSKCGSLSSARQVFDTTPE 684
Query: 77 THMLHSYSAAFHWNNIIRLY-----TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS 131
++ WN I+ Y + ++ L ++ + + TL VLK
Sbjct: 685 RDLVT-------WNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLC 737
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
L +H A+++GLE + F +++YSK G AR +FD ER + WN
Sbjct: 738 LNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWN 797
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE---LALQVHKYV 248
++ G Q G KEA +F + G PD+ ++ + + + E LA QV Y
Sbjct: 798 MMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAY- 856
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
A K+ D P+V W + G
Sbjct: 857 -----------------------------AAKLSLSDDNPDVFCWNKKLSECLWAGDNWG 887
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCM 367
A++CF M I + VT + VL+A ++ GK + +K+ + A+ +
Sbjct: 888 AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVAN--SL 945
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
V++ + G AR + M +++ W ++ +C +
Sbjct: 946 VNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSCAQ 982
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 188/304 (61%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
IS + G + A +VFD P SW A+I G ++GR EAID F + G E D
Sbjct: 144 MISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVETD 203
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+T+V+V SAC +G L L + VH+ V + + + + + NSLIDMY +CG+++LA +V
Sbjct: 204 YITLVAVVSACAEVGALGLGMWVHRLVL--RQRLERNVRVANSLIDMYARCGQVNLAAQV 261
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F I + V SW SMIVG+AANG +A++ F MR G +P+ VT GVL+AC H G
Sbjct: 262 FRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLT 321
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ G ++++M Y + R HYGC+VDLLGRAG L+EA +VE MPM+ N V+ G L+
Sbjct: 322 EHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLA 381
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
C GN+ M E + +HL EL+P D YV+LSNIYA+ G W+ ++R++MK R + K
Sbjct: 382 GCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKR 441
Query: 462 PAYS 465
P +S
Sbjct: 442 PGHS 445
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 44/275 (16%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + +A+D + M GV D TL V+ A ++ AL +G +H L +
Sbjct: 172 WTALIDGFVKNGRHDEAIDCFRAMLLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVL 231
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R LE N + I +Y++ G A +VF +R + SWN++I G + +GR +AI+
Sbjct: 232 RQRLERNVRVANSLIDMYARCGQVNLAAQVFRSIRKRTVVSWNSMIVGFAANGRCTDAIE 291
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLMLNSL 265
+F +++ GF+PD VT+ V +AC G E L+ + + + V ++ + +
Sbjct: 292 LFEEMRRQGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGVAARMEH----YGCV 347
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+D+ G+ GR+D + H + +RPN
Sbjct: 348 VDLLGRAGRLD----------------------------------EAMHVVETMPMRPNE 373
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
V +L+ C G + + +MM+++++++P+
Sbjct: 374 VVLGALLAGCRTHGNLDMAE---QMMQHLFELDPQ 405
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 39/264 (14%)
Query: 174 KARKVFDENPE---RKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSV 228
++ K F P R + SW + I+ ++ G A + P+DVT+++V
Sbjct: 16 RSTKEFQRAPRHAPRDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTV 75
Query: 229 TSACG----SLGDLELALQVHKYV----------------FQVKSKQKSDTLML------ 262
SAC S LAL +H F + S+ L L
Sbjct: 76 LSACADSPSSPLASPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDSMPV 135
Query: 263 ------NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
N++I + G +D A++VF + P+ SWT++I G+ NG +EA+DCF M
Sbjct: 136 RSVVTYNTMISGLMRNGLVDAAFEVFDGMPGPDKVSWTALIDGFVKNGRHDEAIDCFRAM 195
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
G+ +++T V V+SAC G + G ++ ++E ++D+ R G
Sbjct: 196 LLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLR-QRLERNVRVANSLIDMYARCGQ 254
Query: 377 LEEARAMVEGMPMKANVVIWGCLM 400
+ A + + K VV W ++
Sbjct: 255 VNLAAQVFRSI-RKRTVVSWNSMI 277
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 210/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + E ++ L ++ M+ G LPD + L VL+ L AL GRQ+H
Sbjct: 152 WNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVR 211
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E N S +Y K G + ++ P + + +WN +IAG +Q+G +E +D
Sbjct: 212 KCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLD 271
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ +K GF PD +T VSV S+C L L Q+H V +K+ +++SLI M
Sbjct: 272 QYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEV--IKAGASLIVSVISSLISM 329
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG ++ + KVF E + +V W+SMI Y +G EA+D F+ M + + N VTF
Sbjct: 330 YSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTF 389
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC H G ++G FF++M Y ++PR HY CMVDLLGR G +EEA A++ MP
Sbjct: 390 LSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMP 449
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+KA+V+ W L+ AC+ +M +++ + L+P YV+LSNI+AS W++V
Sbjct: 450 VKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSD 509
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ R L K P S
Sbjct: 510 VRKAMRDRKLKKEPGIS 526
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 125/242 (51%), Gaps = 33/242 (13%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSK--------------------------- 168
+L +G+QLHSL + G S++F + ++LYSK
Sbjct: 67 SLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILIN 126
Query: 169 ----AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+GD+ ARK+FDE PER + +WNA++AGL Q +E + +F + + GF PD+
Sbjct: 127 GYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFA 186
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ SV C L L QVH YV K + + ++++SL MY KCG + ++
Sbjct: 187 LGSVLRGCAGLRALVAGRQVHGYV--RKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRA 244
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ NV +W ++I G A NG E LD ++ M+ +G RP+ +TFV V+S+C + +G
Sbjct: 245 MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQG 304
Query: 345 KH 346
+
Sbjct: 305 QQ 306
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 92/259 (35%), Gaps = 40/259 (15%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
R+ F NP A L G K+A D F EP + +C S
Sbjct: 10 TRRHFSTNPSSG-SELTAEFTNLCSKGHLKQAFDRFSS--HIWSEPS--LFSHLLQSCIS 64
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY--------------- 279
L L Q+H + + S SD + N L+++Y KCG++D A
Sbjct: 65 ENSLSLGKQLHSLI--ITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCN 122
Query: 280 ----------------KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
K+F E+ + NV++W +M+ G E L F M E G P
Sbjct: 123 ILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLP 182
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ VL C + G+ ++ E + + + G L E +
Sbjct: 183 DEFALGSVLRGCAGLRALVAGRQVHGYVRKC-GFEFNLVVVSSLAHMYMKCGSLGEGERL 241
Query: 384 VEGMPMKANVVIWGCLMGA 402
+ MP + NVV W L+
Sbjct: 242 IRAMPSQ-NVVAWNTLIAG 259
>gi|357457659|ref|XP_003599110.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488158|gb|AES69361.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 623
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 225/376 (59%), Gaps = 6/376 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+++ ++ + L ++ M L + +T V+ A A + G +H A
Sbjct: 114 WNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCA 173
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE--RKLGSWNAIIAGLSQDGRAKE 205
++LGL + +++Y K G E A ++F E PE + + SWN+I+A +Q+G E
Sbjct: 174 MKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNE 233
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A + F ++ GF PDD TMVS+ AC + + +H +F + + ++ +L
Sbjct: 234 AFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDE--NLTIVTTL 291
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH-YMRESGIRPN 324
+++Y K GR++ + KVF EI +P+ +WT+M+ GYA +G EA++ F +RE G+ P+
Sbjct: 292 LNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPD 351
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
HVTF +LSAC H G V+EGK+FF +M +VY+++PR HY CMVDLLGR GLL++A ++
Sbjct: 352 HVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELI 411
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP + N +WG L+GAC N+ +G+ AK+L L+P Y++LSN+Y++ GLW
Sbjct: 412 KNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWN 471
Query: 445 EVERIRAVMKHRNLAK 460
+ ++R +MK++ L +
Sbjct: 472 DASKVRTLMKNKVLTR 487
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P TL + LK+S ++ I R +H+ ++ + F +S Y K G + A +
Sbjct: 46 PFLSTLILHLKSSS---SVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLL 102
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK-CGFEPDDVTMVSVTSACGSLGD 237
FDE P++ SWN++++GL++ G+ E + +F +K + ++ T +SV SAC S
Sbjct: 103 FDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKA 162
Query: 238 LELALQVH------KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI--DQPN 289
+ VH V++VK ++N+L++MYGK G ++ A+++F E+ + +
Sbjct: 163 CDEGYYVHCCAMKLGLVYEVK--------VVNALVNMYGKFGFVESAFRLFSEMPESEKS 214
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+ SW S++ A NG+ NEA +CF MR +G P+ T V +L AC
Sbjct: 215 IVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQAC 260
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 117/229 (51%), Gaps = 15/229 (6%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
+ M S + WN+I+ + + P +A + + M G PD T+ +L+A C+ F
Sbjct: 206 SEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQA-CENFP 264
Query: 137 LEIGRQ---LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L GR LH + GL+ N + ++LYSK G +RKVF+E + +W A+
Sbjct: 265 L--GRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAM 322
Query: 194 IAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+AG + G KEAI+ F + ++ G EPD VT + SAC G ++ KY F+V
Sbjct: 323 LAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSG----LVKEGKYFFRVM 378
Query: 253 S---KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
S K + + ++D+ G+CG +D A+++ + +PN W +++
Sbjct: 379 SDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALL 427
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 236/429 (55%), Gaps = 34/429 (7%)
Query: 50 PAKIVATQLSKCTNLLQL----NQIYAHIIRTHM---LHSYSAAFHWNNIIRLYTRLEAP 102
P K L K ++ Q QI+ H+++ + +H SA H + + RLE
Sbjct: 130 PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIH---MYASFGRLEDA 186
Query: 103 KKAL-----DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
+K D+ + + D Y VL+A+ LFA + + S V
Sbjct: 187 RKMFYSGESDVVCW----NTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNV--------- 233
Query: 158 CESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
I+ +K G+ ARK+FDE ER SW++++ G GR KEA+++F +++
Sbjct: 234 ----MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE 289
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
P + SV +AC ++G ++ VH Y+ ++ K D ++ +L+DMY KCGR+D+
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQGRWVHAYL--KRNSIKLDAVLGTALLDMYAKCGRLDM 347
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
++VF E+ + + +W +MI G A +G A +AL+ F ++E ++PN +T VGVL+AC H
Sbjct: 348 GWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAH 407
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V +G F+ M+ Y ++P HYGCMVDLLGR+GL EA ++ MPMK N +WG
Sbjct: 408 AGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWG 467
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+GAC GN + E V K L ELEP + G YV+LSNIYA G +++V +IR +MK R
Sbjct: 468 ALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRG 527
Query: 458 LAKIPAYSL 466
+ +P S+
Sbjct: 528 IKTVPGVSI 536
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 152/366 (41%), Gaps = 28/366 (7%)
Query: 97 TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK--ASCQLFALEIGRQLHSLAVRLGLES 154
+ L +P K +D F + + VLK S + +L+ QLH L +R G
Sbjct: 7 SHLPSPFKPVD---FSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQ 63
Query: 155 NEFCESGFISLYSKA--GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ + + Y+ +F+ A KVF P + WN +I G ++ + +AI F G
Sbjct: 64 DHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAI-YFYG 122
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
P+ T ++ AC ++ Q+H +V VK SD + ++ I MY
Sbjct: 123 RMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHV--VKHGIGSDVHIKSAGIHMYASF 180
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
GR++ A K+F+ + +V W +MI GY G+ A F M I +V G+
Sbjct: 181 GRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL- 238
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM---PM 389
GG + + + F+ M +I + MVD AG +EA + + M
Sbjct: 239 ---AKGGNLGDARKLFDEMSERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY-VVLSNIYASRGL----WE 444
+ I ++ AC G + G WV +L+ D L ++YA G WE
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 445 EVERIR 450
E ++
Sbjct: 351 VFEEMK 356
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK--CGRMDLAYKVFWEIDQPNVS 291
S+ L+ Q+H V ++S D + +L+ Y D A KVF I PNV
Sbjct: 42 SITSLQYLTQLHGLV--LRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK------ 345
W +I G N +A+ + M RPN T+ + AC VQEG+
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158
Query: 346 ----------------HFF-------EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
H + + K Y E + M+D + G+LE A+
Sbjct: 159 VKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKG 218
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ MP+K N+ W ++ K GN +G+ K E+ + ++ + + Y S G
Sbjct: 219 LFAQMPVK-NIGSWNVMINGLAKGGN--LGD-ARKLFDEMSERDEISWSSMVDGYISAGR 274
Query: 443 WEEVERIRAVMK 454
++E I M+
Sbjct: 275 YKEALEIFQQMQ 286
>gi|356533546|ref|XP_003535324.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Glycine max]
Length = 483
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 243/477 (50%), Gaps = 44/477 (9%)
Query: 24 RLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQL---NQIYAHIIRTHML 80
RL R H+T + +I+A +S C +L ++ +++AH ++L
Sbjct: 13 RLLHGGKTRSHLTEIHGHFLRHGLQQSNQILAHFVSVCASLRRVPYATRLFAHTHNPNIL 72
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
+N II+ ++ + + M + PD YTL + K++ L +G
Sbjct: 73 L-------FNAIIKAHSLHPPFHASFSFFSLMKTRAISPDEYTLAPLFKSASNLRYYVLG 125
Query: 141 RQLHSLAVRLG-----------LESNEFCE--------------------SGFISLYSKA 169
+H+ VRLG LE CE + I + K
Sbjct: 126 GCVHAHVVRLGFTRHASVRVAALEVYASCERMGDASKVFDEMRDPDVVVWNLMIRGFCKM 185
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
GD E KVF + ER + SWN +++ L+++ + ++A+++F + + GFEPDD ++V+V
Sbjct: 186 GDLETGMKVFGQMKERTVVSWNLMMSCLAKNNKEEKALELFNEMLEQGFEPDDASLVTVL 245
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQP 288
C LG +++ +H Y Q DT+ + NSL+D Y KCG + A+ +F ++
Sbjct: 246 PVCARLGAVDIGEWIHSYANSKGFLQ--DTINVGNSLVDFYCKCGNLQAAWSIFNDMASK 303
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
NV SW +MI G A NG ++ F M G PN TFVGVL+ C H G V G+ F
Sbjct: 304 NVVSWNAMISGLAYNGEGEVGVNLFEEMVHGGFEPNDSTFVGVLACCAHVGLVDRGRDLF 363
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
M +++ P+ HYGC+VDLLGR G + EAR ++ MP+K +WG L+ AC +G+
Sbjct: 364 ASMSVKFKVSPKLEHYGCVVDLLGRCGHVREARDLITSMPLKPTAALWGALLSACRTYGD 423
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ E AK L LEPW+ G YV+LSN+YA G W+EVE++R +M+ + K+P S
Sbjct: 424 REIAENAAKELVRLEPWNSGNYVLLSNVYAEEGRWDEVEKVRVLMRGGGVKKVPGQS 480
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 224/413 (54%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHS 145
W + I L TR +A + M AGV P T I L + C F + +G LH
Sbjct: 14 WTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITF-IALLSGCGDFPSGSETLGDLLHG 72
Query: 146 LAVRLGLESNE-FCESGFISLYSKAGDFEKAR---------------------------- 176
A +LGL+ N + + +YSK G +KAR
Sbjct: 73 YACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSGQVH 132
Query: 177 ---KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
K+FD+ PE L SW A++ G + G +EA+ F ++ G +PD V +++ +AC
Sbjct: 133 NAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAALNACT 192
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+LG L L L VH+YV + K++ + NSLID+Y +CG ++ A +VF ++++ V SW
Sbjct: 193 NLGALSLGLWVHRYV--MSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 250
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+IVG+AANG A+E+L F M+E G +PN VTF G L+AC H G V EG FF+ MK
Sbjct: 251 NSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKR 310
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMG 412
Y I PR HYGC+VDL RAG LE+A +V+ MPMK N V+ G L+ AC G N +
Sbjct: 311 DYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRNHGNNTVLA 370
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E + KHL +L S YV+LSN+YA+ WE R+R MK L K P +S
Sbjct: 371 ERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPGFS 423
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Query: 21 LLHRL-CKTHTFRKHVTISAASSFLDTHEDPAKIVATQLS----KCTNLLQLNQIYAHII 75
LLH CK R HV + A L + ++ +L N + N + +
Sbjct: 69 LLHGYACKLGLDRNHVMVGTA--ILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYM 126
Query: 76 RTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI 126
R+ +H+ F W ++ + + ++AL + M +GV PD +
Sbjct: 127 RSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIA 186
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
L A L AL +G +H + ++N + I LY + G E AR+VFD+ +R
Sbjct: 187 ALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 246
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SWN++I G + +G A E++ F +++ GF+P+ VT +AC +G ++ L+
Sbjct: 247 VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLR--- 303
Query: 247 YVFQVKSKQKSDTLML---NSLIDMYGKCGRMDLAYKVFWEID-QPN 289
FQ + + + + L+D+Y + GR++ A KV + +PN
Sbjct: 304 -FFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPN 349
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL--GD 237
+++ + SW + I L++ EA F ++ G EP +T +++ S CG G
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L +H Y ++ ++ ++ +++ MY K GR+ A VF +D N +W +MI
Sbjct: 64 ETLGDLLHGYACKL-GLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMI 122
Query: 298 VGY-------------------------------AANGLANEALDCFHYMRESGIRPNHV 326
GY G EAL F M+ SG++P++V
Sbjct: 123 DGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYV 182
Query: 327 TFVGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+ L+AC + G + G H + M ++ ++ R ++ ++DL R G +E AR +
Sbjct: 183 AIIAALNACTNLGALSLGLWVHRYVMSQD-FKNNVRVSN--SLIDLYCRCGCVEFAREVF 239
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
+ M K VV W ++ GN + +QE
Sbjct: 240 DKME-KRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 275
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
+ SWTS I + EA F MR +G+ P H+TF+ +LS C G G
Sbjct: 11 IVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGC---GDFPSGSETLG 67
Query: 350 MMKNVYQIEPRFAHYGCMVD--LLG---RAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ + Y + MV +LG + G +++AR + + M K N V W ++
Sbjct: 68 DLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDK-NSVTWNTMIDGYM 126
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
+ G V + + E + S + + N + +G EE
Sbjct: 127 RSGQVHNAVKLFDKMPEPDLIS---WTAMVNGFVKKGFHEE 164
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/413 (37%), Positives = 218/413 (52%), Gaps = 36/413 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + +AL +++ M G PD TL V+ A L A GRQ+H+ V
Sbjct: 220 WNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMV 279
Query: 149 -RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------------ 189
R L + + + +Y+K G +AR +FD P R + S
Sbjct: 280 KRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQ 339
Query: 190 -------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
WN +IA +Q+G +EAI +F+ LK+ P T +V +ACG++
Sbjct: 340 VVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 237 DLELALQVHKYV----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
L+L Q H +V F+ +SD + NSL+DMY K G +D KVF + + S
Sbjct: 400 VLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS 459
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MIVGYA NG A +AL F M S P+ VT +GVLSAC H G V EG+ F M
Sbjct: 460 WNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMT 519
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ I P HY CMVDLLGRAG L+EA +++ MP + + V+W L+GAC NV++G
Sbjct: 520 EDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELG 579
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E A L EL+P + G YV+LSN+YA G W +V R+R MK R ++K P S
Sbjct: 580 ERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCS 632
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 38/327 (11%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ Y+ L A L G Q+H L R + + + +Y+K AR+VF
Sbjct: 150 NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVF 209
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D PER + SWN++I Q+G EA+ +F+ + GF PD+VT+ SV SAC L
Sbjct: 210 DAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAER 269
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR------------------------- 274
QVH ++ + + + + D ++ N+L+DMY KCGR
Sbjct: 270 EGRQVHAHMVK-RDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 275 ------MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
++ A VF ++ + NV +W +I YA NG EA+ F ++ I P H T+
Sbjct: 329 YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTY 388
Query: 329 VGVLSACVHGGKVQEGKH-FFEMMKNVYQIE--PRFAHY--GCMVDLLGRAGLLEEARAM 383
VL+AC + +Q G+ ++K ++ + P + +VD+ + G +++ +
Sbjct: 389 GNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKV 448
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVK 410
E M + NV W ++ + G K
Sbjct: 449 FERMAARDNVS-WNAMIVGYAQNGRAK 474
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR--AKEAIDMFIG 212
N F + +S Y++ G ++AR +F+ P+ S+NA++A L++ GR A +A+
Sbjct: 82 NTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAA 141
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ F + + S SAC + DL QVH V +S D + +L+DMY KC
Sbjct: 142 MHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLV--ARSPHADDVHIGTALVDMYAKC 199
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
R A +VF + + NV SW S+I Y NG EAL F M +G P+ VT V+
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVM 259
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC +EG+ M ++ +VD+ + G EAR + + MP ++
Sbjct: 260 SACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRS- 318
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
VV ++ K NV+ + V + E A+ VL YA G EE R+
Sbjct: 319 VVSETSILAGYAKSANVEDAQVVFSQMVEKNVI---AWNVLIAAYAQNGEEEEAIRLFVQ 375
Query: 453 MKHRNL 458
+K ++
Sbjct: 376 LKRDSI 381
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 78/195 (40%), Gaps = 41/195 (21%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+KS +T +LN+L+ Y + GR+ A +VF I N S+ +++ YA G +EA
Sbjct: 44 LKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRPDEAR 103
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--------HFFEMMKNVYQIEPRFA 362
F + + P+ ++ V++A G+ G H + + N Y +
Sbjct: 104 ALFEAIPD----PDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159
Query: 363 ---------------------------HYG-CMVDLLGRAGLLEEARAMVEGMPMKANVV 394
H G +VD+ + +AR + + MP + NVV
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPER-NVV 218
Query: 395 IWGCLMGACEKFGNV 409
W L+ E+ G V
Sbjct: 219 SWNSLITCYEQNGPV 233
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 213/377 (56%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P+KA++ Y M GV+PD T+ VL A L L+ G LH A
Sbjct: 365 WTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFAD 424
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL S + I +YSK +KA +VF P + + SW +II GL + R+ EA+
Sbjct: 425 RTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEAL- 483
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +P+ VT+VSV SAC +G L ++H + +++ D + N+L+DM
Sbjct: 484 FFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHA--LRTGLGFDGFLPNALLDM 541
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGRM+ A+ F ++ +V+SW ++ GYA G A++ FH M ES + P+ +TF
Sbjct: 542 YVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L AC G V +G +FE M++ + I P HY +VDLLGRAG LE+A ++ MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + IWG L+ AC + NV++GE A+H+ E++ S G Y++L N+YA G W+EV R
Sbjct: 661 IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVAR 720
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ L P S
Sbjct: 721 VRKIMRENRLTVDPGCS 737
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 4/314 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN ++ Y + +AL++Y M G+ PD YT P VL+ L L GR++H
Sbjct: 161 FSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLH 220
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+R G ES+ + I++Y K GD AR VFD P R SWNA+I+G ++ E
Sbjct: 221 VIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEG 280
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F +++ +PD +TM SV SAC +LGD L +VH YV +K+ ++ + NSLI
Sbjct: 281 LRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYV--IKTGFVAEVSVNNSLI 338
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
M+ G D A VF +++ ++ SWT+MI GY NGL +A++ + M G+ P+ +
Sbjct: 339 QMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEI 398
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T VLSAC G + +G E + ++D+ + +++A +
Sbjct: 399 TIASVLSACAGLGLLDKGIMLHEFADRT-GLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457
Query: 387 MPMKANVVIWGCLM 400
+P K NV+ W ++
Sbjct: 458 IPNK-NVISWTSII 470
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 131/273 (47%), Gaps = 20/273 (7%)
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+ + + L VRLG + +S++ + GD +A VF + ER L SWN ++ G +
Sbjct: 120 VSKTVTRLGVRLG--------NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G EA++++ + G PD T V CG L DL +VH +V ++ +SD
Sbjct: 172 KAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHV--IRYGFESD 229
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
++N+LI MY KCG + A VF + + + SW +MI GY N + E L F MRE
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGCMVDLLGRA 374
+ P+ +T V+SAC G + G+ + Y I+ F ++ +
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREV-----HGYVIKTGFVAEVSVNNSLIQMHSSV 344
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
G +EA + M K ++V W ++ EK G
Sbjct: 345 GCWDEAEMVFSKMEFK-DLVSWTAMISGYEKNG 376
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 224/402 (55%), Gaps = 37/402 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ----LFALEIGRQ 142
F +N +IR Y++ +P +++ ++ M R V PD +T +LK + L + +
Sbjct: 307 FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDE 366
Query: 143 LHSLAVRLGLESNEFCESGFISLYS-------------------------------KAGD 171
+H ++LG + F + I LY+ +AG+
Sbjct: 367 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 426
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
E AR+VFDE PER + SW +++G +Q R++EA+++F ++ G PD+V MV V SA
Sbjct: 427 LELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISA 486
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C SLGDLE +VH+Y+ + + N+LIDMY KCG MDLA++VF +++ ++
Sbjct: 487 CTSLGDLETGFEVHRYIDENGFGWMVS--LCNALIDMYAKCGCMDLAWQVFNNMERKSLI 544
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+W SMI A +G A +A F M SGIRP+ VTF+ +L+A H G V +G FE M
Sbjct: 545 TWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESM 604
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ Y +E HYGCMVD+LGRAG LEEA ++ M M N V+WG L+ AC +G+V+M
Sbjct: 605 QRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEM 664
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
GE V K L EL+P G Y++L +IY + G E +R M
Sbjct: 665 GERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAM 706
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 52/348 (14%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
K L YI +LP +L + +A + AL++ +H+ A R L ++ +
Sbjct: 224 KTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIF 280
Query: 164 SL--YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
S G A ++F + + +N +I G S+ +++ +F +++ +PD
Sbjct: 281 RFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPD 340
Query: 222 DVTMVSVTSACGSLG-DLELAL---QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
T + + DL L + ++H V ++ ++N+LI +Y G
Sbjct: 341 GFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFC--FHLFVMNALIHLYAARGVPAA 398
Query: 278 AYKVFWEIDQPNVSSWTSMIV-------------------------------GYAANGLA 306
A++VF E+ +V SW+ ++V GYA +
Sbjct: 399 AHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRS 458
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY-- 364
EAL+ F MR+ G+RP+ V V V+SAC G ++ G FE+ + Y E F
Sbjct: 459 REALELFREMRDVGVRPDEVAMVIVISACTSLGDLETG---FEVHR--YIDENGFGWMVS 513
Query: 365 --GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G ++ A + M K+ ++ W ++ AC GN +
Sbjct: 514 LCNALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSMISACANHGNAE 560
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 136/348 (39%), Gaps = 85/348 (24%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N +IR Y++ +P +++ ++ M R V PD +T +LK GR +
Sbjct: 153 FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLK----------GRSRMRI 202
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ L + S+E +G D++K +
Sbjct: 203 DLPLIVASDEIHGAGV--------DYDKYK-----------------------------T 225
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +I K P ++ S+ AC ++ L+L +H F+ + L
Sbjct: 226 LKSYISNKVMHMLPTSQSLASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIFRF 282
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
G + A ++F +I QPN + ++I GY+ + ++++ F+ MR + + P+
Sbjct: 283 AAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGF 342
Query: 327 TFVGVL---------------SACVHGGKVQEG--KHFFEMMKNVYQIEPR---FAHYGC 366
TF +L S +HG ++ G H F M ++ R A +
Sbjct: 343 TFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQV 402
Query: 367 MVDLLG--------------RAGLLEEARAMVEGMPMKANVVIWGCLM 400
+++G RAG LE AR + + MP + +VV W ++
Sbjct: 403 FNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPER-DVVSWTVMV 449
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y++A + ++F E + ++ + + G+ D + + +I K P ++
Sbjct: 33 YAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYD--KYKTLKSYISNKVMHMLPTSQSL 90
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
S+ AC ++ L+L +H F+ + L G + A ++F +I
Sbjct: 91 ASMAEACLAMQALKL---IHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQI 147
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
QPN + ++I GY+ + ++++ F+ MR + + P+ TF +L
Sbjct: 148 HQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLL 194
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 214/377 (56%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P +A+ + M RA P+ +T +LKA+ IG Q+H+LAV
Sbjct: 129 WTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAV 188
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + + S + +Y++ + A VFD + SWNA+IAG ++ + +
Sbjct: 189 KYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLM 248
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF T S+ SA +G LE VH ++ +KS QK + N+++ M
Sbjct: 249 KFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL--IKSGQKLTAFVGNTMLGM 306
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +D+ ++ +W +M+ A GL EA+ F +R+ GI+ N +TF
Sbjct: 307 YAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITF 366
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V+EGKH+F+MMK+ Y ++P HY VDLLGRAGLL+EA V MP
Sbjct: 367 LSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 425
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ +WG L+GAC N KMG++ A H+ EL+P G V+L NIYAS G W + R
Sbjct: 426 MEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAAR 485
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 486 VRKMMKATGVKKEPACS 502
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 7/297 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
++ A Q L R +H+ R L + F + I +Y K G AR VFD+ P R
Sbjct: 66 IIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRD 125
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW +IAG +Q+ EAI + + + F P+ T S+ A G+ G + Q+H
Sbjct: 126 VVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMH- 184
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
VK D + ++L+DMY +C +MD+A VF + N SW ++I G+A
Sbjct: 185 -ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADG 243
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
L F M+ +G H T+ + SA G +++G+ + Q F
Sbjct: 244 ETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVG-NT 302
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
M+ + ++G + +AR + + M K ++V W ++ A ++G +G+ H +E+
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALAQYG---LGKEAVAHFEEIR 355
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 216/376 (57%), Gaps = 2/376 (0%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
+ +I Y +KAL ++ ++ + P+ T+ VL A + AL +G+++H +R
Sbjct: 413 STVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLR 472
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
E + ES + +Y+K G + + +F + + +WN++I+ SQ+G +EA+D+
Sbjct: 473 NAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDL 532
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G + ++VT+ S SAC SL + ++H + +K K+D ++LIDMY
Sbjct: 533 FRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVI--IKGPIKADIFAESALIDMY 590
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG M+LA +VF + N SW S+I Y A+GL E++ H M+E G +P+HVTF+
Sbjct: 591 AKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFL 650
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
++SAC H G V+EG F+ M Y I PR H+ CMVDL R+G L++A + MP
Sbjct: 651 ALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPF 710
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
K + IWG L+ AC NV++ + ++ L +L+P + G YV++SNI A G W+ V ++
Sbjct: 711 KPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKV 770
Query: 450 RAVMKHRNLAKIPAYS 465
R +MK + KIP YS
Sbjct: 771 RRLMKDNKILKIPGYS 786
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/263 (33%), Positives = 134/263 (50%), Gaps = 4/263 (1%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
++ WN +IR +T A+ Y+ M A PD +TLP V+K+ L A+ +GR
Sbjct: 103 SSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRL 162
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H A GL S+ + S I +YS AG AR FD P R WN ++ G + G
Sbjct: 163 VHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGD 222
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
A+ +F ++ G EP+ T+ S C + DL +Q+H VK + + +
Sbjct: 223 VGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHS--LAVKCGLEQEVAVA 280
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+L+ MY KC +D A+++F + + ++ +W MI G NGL +EAL F M SG R
Sbjct: 281 NTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGAR 340
Query: 323 PNHVTFVGVLSACVHGGKVQEGK 345
P+ VT V +L A +++GK
Sbjct: 341 PDSVTLVSLLPALTDLNGLKQGK 363
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + A+ ++ M +G P+ TL L L G QLHSLAV
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLE + +S+Y+K + A ++F+ P L +WN +I+G Q+G EA+
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALG 329
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G PD VT+VS+ A L L+ +VH Y+ +++ D ++++L+D+
Sbjct: 330 LFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYI--IRNCVHMDAFLVSALVDI 387
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + A ++ +V +++I GY NG++ +AL F Y+ E I+PN VT
Sbjct: 388 YFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTV 447
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL AC + G+ +++N Y E + ++D+ + G L+ + + M
Sbjct: 448 ASVLPACASISALPLGQEIHGYVLRNAY--EGKCYVESALMDMYAKCGRLDLSHYIFSKM 505
Query: 388 PMKANVVIWGCLMGACEKFG 407
+K + V W ++ + + G
Sbjct: 506 SLK-DEVTWNSMISSFSQNG 524
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 128/248 (51%), Gaps = 14/248 (5%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLH------SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
KC L +YA R + H S WN++I +++ P++ALD++ M
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMC 537
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ + T+ L A L A+ G+++H + ++ ++++ F ES I +Y+K G+ E
Sbjct: 538 MEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNME 597
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A +VF+ P++ SWN+II+ G KE++ +++ G++PD VT +++ SAC
Sbjct: 598 LALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACA 657
Query: 234 SLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPN 289
G +E LQ +FQ +K+ ++D+Y + GR+D A + ++ +P+
Sbjct: 658 HAGLVEEGLQ----LFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPD 713
Query: 290 VSSWTSMI 297
W +++
Sbjct: 714 AGIWGALL 721
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 12/193 (6%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFW 283
++++ C S L L LQ+H + + L L++ L+ MY R A VF
Sbjct: 35 LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 284 EIDQPNVSS---WTSMIVGYAANGLANEALDCFHYMR----ESGIRPNHVTFVGVLSACV 336
+ + S W +I G+ A G + +L Y++ + P+ T V+ +C
Sbjct: 95 ALPRAAAGSSLPWNWLIRGFTAAG--HHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCA 152
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
G V G+ + + ++ + AGLL +AR +GMP + + V+W
Sbjct: 153 ALGAVSLGRLVHRTARATGLASDVYVG-SALIKMYSDAGLLRDARDAFDGMPWR-DCVLW 210
Query: 397 GCLMGACEKFGNV 409
+M K G+V
Sbjct: 211 NVMMDGYIKAGDV 223
>gi|15221226|ref|NP_177580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169846|sp|Q9CA73.1|PP119_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74400
gi|12324820|gb|AAG52382.1|AC011765_34 hypothetical protein; 20273-21661 [Arabidopsis thaliana]
gi|332197466|gb|AEE35587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 229/391 (58%), Gaps = 9/391 (2%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKAL-DIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
+ +LH ++ + N+ ++ Y P KAL D ++ D +++ +K S
Sbjct: 19 SFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQK 78
Query: 136 ALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK-LGSWNAI 193
A + GRQ+H+L +LG + ++ + YS GD + AR+VFDE PE++ + W A+
Sbjct: 79 ASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAM 138
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I+ +++ + EAI++F ++ E D V + SAC LG +++ +++ + K
Sbjct: 139 ISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKR 198
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ D + NSL++MY K G + A K+F E + +V+++TSMI GYA NG A E+L+ F
Sbjct: 199 RLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELF 258
Query: 314 HYMR------ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
M+ ++ I PN VTF+GVL AC H G V+EGK F+ M Y ++PR AH+GCM
Sbjct: 259 KKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDL R+G L++A + MP+K N VIW L+GAC GNV++GE V + + EL+
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
G YV LSNIYAS+G+W+E ++R ++ R +
Sbjct: 379 GDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
>gi|413941558|gb|AFW74207.1| hypothetical protein ZEAMMB73_978994 [Zea mays]
Length = 580
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 218/387 (56%), Gaps = 3/387 (0%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H +F + ++ R R P AL Y + A + + V KA L A+ G
Sbjct: 65 HPAPDSFLFCSLTRATARRGLPAAALAFYRCLLAAALPFSSFAFTSVAKACADLSAIRAG 124
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H+ AV LGL SN F ++ + LYSK G + ARK+FD ++ + +WNA+I+G Q+
Sbjct: 125 MGIHAHAVLLGLGSNRFVQTSLVVLYSKCGQLDVARKLFDAIRDKSVVAWNAMISGYEQN 184
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A AI+++ ++ G PD T V+ SAC G L+L QV K + V + + + +
Sbjct: 185 GLAGRAIEVYREMQMAGEAPDSATFVATLSACAQAGALDLGRQVDKLI--VSERMEMNVV 242
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +L++MY +CG ++ A + F + + NV +WTSMI GY +G EA+ F+ MR+ G
Sbjct: 243 LGAALVNMYARCGLVNKAREWFNMLQERNVVTWTSMIAGYGMHGHGGEAVKLFNLMRQQG 302
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PN VTFV VLSAC H G V EG+ F MK+VY + PR HY MVD+ GRAGLL++A
Sbjct: 303 PPPNDVTFVAVLSACAHAGLVSEGRDAFASMKSVYGLVPRVEHYCSMVDMYGRAGLLDDA 362
Query: 381 -RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
R + + +P + +W ++GAC+ + +G VA+ L LEP S V+LSN+YA
Sbjct: 363 MRFIHDSIPGEPGPEVWTAMLGACKMHKDFNLGVEVAERLIALEPESPSHRVLLSNLYAL 422
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
G VE++R M R L K YSL
Sbjct: 423 SGKMNHVEKVRDTMIKRRLKKPIGYSL 449
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 223/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y R +A ++ M AG L P+ TL V+ A Q+ L GR ++
Sbjct: 210 WTTLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYV 269
Query: 148 VRLGLESNEFCESGFISL-------------------------------YSKAGDFEKAR 176
G+ + E+ I + Y+K GD E A
Sbjct: 270 ADGGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAA 329
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
++FD+ P R SW+ +IA SQ + +EA+ +F + + G EP + +VSV SAC LG
Sbjct: 330 RLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLG 389
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+L ++ + + K + N+ ID+Y KCG D A K+F E+ + NV SW SM
Sbjct: 390 CLDLGRWIYDN-YVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSM 448
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I+ +A +G + E L F ++ + I P+ +TF+G+LSAC H G V EG+ +F+ MK +Y
Sbjct: 449 IMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYG 508
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEP+ HY CM+DLLG+ GLLEEA + +GMPM+ + WG L+ AC +GNV++GE+ A
Sbjct: 509 IEPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAA 568
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L +L P G YV++S IYAS+ W++V+ +R +M+ R + K P S
Sbjct: 569 DKLVQLNPLDSGIYVLMSQIYASKNKWDQVKILRVLMRERGVKKNPGCS 617
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 175/421 (41%), Gaps = 42/421 (9%)
Query: 18 SHPLLHRLCKTHTFRKHVTISA--ASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHII 75
+HPLL L +F + + + A S L H PA + L+ C L H
Sbjct: 37 THPLLALLESCASFPRFLQLHALLTVSGLAAHRFPA---SRLLAFCA--LSTPPRVDHAA 91
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC--- 132
S A+ ++R + R P +A ++ + R + D TL +KA+
Sbjct: 92 AILARASAPNAYMLATMMRAFLRARLPSRASALFRRVIRESLPADARTLVFAIKAAASEH 151
Query: 133 QLFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
+ + G +H +A++ G + + + + Y+ AR +FDE P+R + SW
Sbjct: 152 EHHSPSGGEGVHCVALKWGHVAQSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWT 211
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
++ G ++ G A EA +F + G +P++VT+V+V SA G +G L V++YV
Sbjct: 212 TLVDGYARRGLADEAWRVFCRMVVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVAD 271
Query: 251 -----------------------------VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
S D ++++ Y KCG ++ A ++
Sbjct: 272 GGVGRSVNLENALIDMFGKFGCAASAREVFDSMAVKDVYSWTTMVNAYAKCGDLESAARL 331
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++ + N SW+ MI Y+ EA+ F M E G+ P + V VLSAC G +
Sbjct: 332 FDDMPRRNAVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCL 391
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ ++ + +D+ + G + A + M + NVV W ++
Sbjct: 392 DLGRWIYDNYVISGKAVLTVNLGNAFIDVYAKCGDFDAASKLFAEMAER-NVVSWNSMIM 450
Query: 402 A 402
A
Sbjct: 451 A 451
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 31/235 (13%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +++ + R + A W+ +I Y++ P++A+ ++ M GV
Sbjct: 320 AKCGDLESAARLFDDMPRRN-------AVSWSCMIAAYSQANQPEEAVRLFKAMIEEGVE 372
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHS---------LAVRLGLESNEFCESGFISLYSKA 169
P L VL A QL L++GR ++ L V LG + FI +Y+K
Sbjct: 373 PINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVNLG--------NAFIDVYAKC 424
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
GDF+ A K+F E ER + SWN++I + G+++E + +F LK PD++T + +
Sbjct: 425 GDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLL 484
Query: 230 SAC---GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
SAC G + + + K ++ ++ K + M ID+ GK G ++ A++V
Sbjct: 485 SACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACM----IDLLGKIGLLEEAFEV 535
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 193/306 (63%), Gaps = 2/306 (0%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ I+ Y K G +KA+ +FD+ P R L SWNA+I G +Q+G +EA+ + + K G +
Sbjct: 165 TAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQ 224
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T++SV +AC SL L+ + H V +KS +S + N+LI MY KCG + +
Sbjct: 225 PDHSTLISVLTACSSLASLQEGRKTH--VLVLKSGYESRISICNALITMYCKCGSILDSE 282
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
F +ID P+V SW +MI +A +G + AL F MR + + P+ +TF+ +LSAC H G
Sbjct: 283 LAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAG 342
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
KV E ++F M Y+I PR H+ C+VD+L R G +E+A +++ MP +A+ IWG L
Sbjct: 343 KVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 402
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC NVK+GE AK + ELEP + GAYVVLSNIYA+ G+W EV R+R +M+ + +
Sbjct: 403 LAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVK 462
Query: 460 KIPAYS 465
K PAYS
Sbjct: 463 KQPAYS 468
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + ++AL ++ M + G+ PD TL VL A L +L+ GR+ H L +
Sbjct: 195 WNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVL 254
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES + I++Y K G + F + + SWNA+IA ++ G A+
Sbjct: 255 KSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALA 314
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM-----LN 263
F ++ EPD +T +S+ SACG G +VH+ + S +S ++
Sbjct: 315 SFGEMRSNRVEPDGITFLSLLSACGHAG------KVHESLNWFNSMIESYKIVPRPEHFA 368
Query: 264 SLIDMYGKCGRMDLAYKVFWEI 285
L+D+ + G+++ AYK+ E+
Sbjct: 369 CLVDILSRGGQVEKAYKIIQEM 390
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 24/257 (9%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ I+ Y K G F++++++F P + + SWN++IAG +D R EA F + +
Sbjct: 10 NSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP----Q 65
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
+ + ++ S +E A ++ + + + + + +++D Y K G ++ A
Sbjct: 66 RNTASWNAMISGLVRYDRVEEASRLFEEM------PRRNVISYTAMVDGYAKIGEIEQAR 119
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+F + Q NV SWT MI GY NG +EA + F M + I V +++ G
Sbjct: 120 ALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI----VAMTAMITGYCKEG 175
Query: 340 KVQEGKHFFEMMKNVYQIEPR-FAHYGCMVDLLGRAGLLEEA---RAMVEGMPMKANVVI 395
K + K F+ QI R A + M+ + G EEA + + M M+ +
Sbjct: 176 KTDKAKILFD------QIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHST 229
Query: 396 WGCLMGACEKFGNVKMG 412
++ AC +++ G
Sbjct: 230 LISVLTACSSLASLQEG 246
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT+ NS+I Y K G D + ++F + NV SW SMI G + +EA F M
Sbjct: 5 DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 64
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR--FAHYGCMVDLLGRAG 375
+ N ++ ++S V +V+E FE M PR Y MVD + G
Sbjct: 65 QR----NTASWNAMISGLVRYDRVEEASRLFEEM-------PRRNVISYTAMVDGYAKIG 113
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMG 401
+E+ARA+ MP K NVV W ++
Sbjct: 114 EIEQARALFNCMPQK-NVVSWTVMIS 138
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 28/222 (12%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD--VTMVSVTSACGSLGDLEL 240
P R SWN+II G ++G E+ +F G P V+ S+ + C ++
Sbjct: 2 PHRDTVSWNSIITGYWKNGCFDESKRLF------GLMPTKNVVSWNSMIAGCIEDERIDE 55
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
A Q + + Q +T N++I + R++ A ++F E+ + NV S+T+M+ GY
Sbjct: 56 AWQYFQAMPQ------RNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGY 109
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIE 358
A G +A F+ M + + V++ ++S V GK E ++ FE M KN+ +
Sbjct: 110 AKIGEIEQARALFNCMPQKNV----VSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMT 165
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
Y C + G ++A+ + + +P + ++ W ++
Sbjct: 166 AMITGY-C------KEGKTDKAKILFDQIPCR-DLASWNAMI 199
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 221/412 (53%), Gaps = 37/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N++IR Y R ++ + Y M G D +T P VLK+S +L ++ +G+ +H L +
Sbjct: 139 FNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLIL 198
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL----------- 197
R+GL+ + + + I LY K G+ A KVFD R + SWNA++AG
Sbjct: 199 RIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALA 258
Query: 198 --------------------SQDGRAKEAIDMFIGLKK--CGFEPDDVTMVSVTSACGSL 235
SQ G A++A+ +F + K G P+ VT++SV AC L
Sbjct: 259 IFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQL 318
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID--QPNVSSW 293
LE Q+H+ + S+ +L +L MY KCG + A F +++ + N+ +W
Sbjct: 319 STLERGRQIHE--LACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAW 376
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+MI YA+ G +A+ F M ++GI+P+ +TF G+LS C H G V G +F M
Sbjct: 377 NTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMST 436
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y I PR HY C+ DLLGRAG L EA +V MPM A IWG L+ AC K N++M E
Sbjct: 437 TYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAE 496
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L LEP + G YV+LSN+YA G W+EV+++RA++K + K P S
Sbjct: 497 TAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCS 548
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 143/324 (44%), Gaps = 37/324 (11%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P + V + L L++G Q+H+ + GL+ S ++ Y+ +GD + + V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+ E +N++I ++ G A+ + + + GF D T V + L +
Sbjct: 128 FNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSV 187
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF----------WE---- 284
+ VH + ++ + D + SLI +YGKCG ++ A KVF W
Sbjct: 188 WMGKCVHGLILRI--GLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLA 245
Query: 285 -------IDQP----------NVSSWTSMIVGYAANGLANEALDCFHYM--RESGIRPNH 325
ID N+ SWT+MI GY+ +GLA +AL F M +SG+RPN
Sbjct: 246 GYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNW 305
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VT + VL AC ++ G+ E+ + + + + + + G L +AR +
Sbjct: 306 VTIMSVLPACAQLSTLERGRQIHELACRM-GLNSNASVLIALTAMYAKCGSLVDARNCFD 364
Query: 386 GMPM-KANVVIWGCLMGACEKFGN 408
+ + N++ W ++ A +G+
Sbjct: 365 KLNRNEKNLIAWNTMITAYASYGH 388
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 223/377 (59%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + E K+AL+ + M G+ PD L + A + A+ G+Q+HS
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVY 473
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ++ + ++LY++ G ++A +F+ + +WN +++G +Q G +EA++
Sbjct: 474 VSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALE 533
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+FI + + G + + T VS SA +L D++ Q+H V +K+ S+T + N+LI +
Sbjct: 534 VFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATV--IKTGCTSETEVANALISL 591
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ A F+E+ + N SW ++I + +G EALD F M++ G++PN VTF
Sbjct: 592 YGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTF 651
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V+EG +F+ M + + I PR HY C+VD+LGRAG L+ AR VE MP
Sbjct: 652 IGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMP 711
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ AN ++W L+ AC N+++GE AK+L ELEP +YV+LSN YA G W +
Sbjct: 712 VSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDH 771
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK R + K P S
Sbjct: 772 VRKMMKDRGVRKEPGRS 788
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 184/349 (52%), Gaps = 13/349 (3%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +++ +I+ RT+++ WN ++ Y ++ K+ D++ M AGV P
Sbjct: 291 KCGVIVEALEIFKSGDRTNVVL-------WNLMLVAYGQISDLAKSFDLFCQMVAAGVRP 343
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ +T P +L+ + +G Q+H L+++ G ES+ + I +YSK G +KAR++
Sbjct: 344 NEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRIL 403
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+ + + SW ++IAG Q KEA++ F ++ G PD++ + S SAC + +
Sbjct: 404 EVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMR 463
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H V+ S +D + N+L+++Y +CGR A+ +F I+ + +W M+ G
Sbjct: 464 QGQQIHSRVYV--SGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSG 521
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIE 358
+A +GL EAL+ F M ++G++ N TFV +SA + +++GK ++K E
Sbjct: 522 FAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSE 581
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
A+ ++ L G+ G +E+A+ M + N V W ++ +C + G
Sbjct: 582 TEVAN--ALISLYGKCGSIEDAKMQFFEMSER-NHVSWNTIITSCSQHG 627
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 168/339 (49%), Gaps = 4/339 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y R ++A+ +Y M +GV+P Y L VL A + E GR +H+
Sbjct: 111 WVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVY 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S + I+LY + G A +VF E P ++N +I+ +Q G + A++
Sbjct: 171 KQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALE 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G+ PD VT+ S+ +AC S+GDL Q+H Y+ +K+ D ++ SL+D+
Sbjct: 231 IFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYL--LKAGMSPDYIIEGSLLDL 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A ++F D+ NV W M+V Y ++ D F M +G+RPN T+
Sbjct: 289 YVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTY 348
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L C + G++ G+ ++ E G ++D+ + G L++AR ++E +
Sbjct: 349 PCLLRTCTYAGEINLGEQ-IHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLE 407
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
K +VV W ++ + K K +Q W D
Sbjct: 408 AK-DVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPD 445
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 166/354 (46%), Gaps = 44/354 (12%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ A+ GL + + I LY+K G ++AR+VF++ R SW A+++G +++G
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+EA+ ++ + G P + SV SAC E VH V+ K S+T++
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVY--KQGSCSETVVG 181
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LI +Y + G + LA +VF E+ + ++ ++I +A G AL+ F MR SG
Sbjct: 182 NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWT 241
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ VT +L+AC G + +GK + + P + G ++DL + G++ EA
Sbjct: 242 PDCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALE 300
Query: 383 MVEGMPMKANVVIWG-----------------------------------CLMGACEKFG 407
+ + + NVV+W CL+ C G
Sbjct: 301 IFKSGD-RTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359
Query: 408 NVKMGEWVAKHLQELEP-WSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL 458
+ +GE + HL ++ + YV VL ++Y+ G ++ RI V++ +++
Sbjct: 360 EINLGEQI--HLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDV 411
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 240/447 (53%), Gaps = 40/447 (8%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML-HSY--------SAAFHWNNIIRLYTRLEAPKKALDI 108
L KC L L Q++AH+I T ++ H+Y S+ + + + ++ + P L
Sbjct: 16 LEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTHALSIFNHIPNPTIFLYN 75
Query: 109 YIFMSRAGVLP--------------------DCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+ S A + P + +T P + KA L GR LH+ +
Sbjct: 76 TLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRHGRALHTHVL 135
Query: 149 R-LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA---- 203
+ L + F ++ ++ Y+K G R +F++ + L SWN+I++ + A
Sbjct: 136 KFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNSILSAYVHNSGAICED 195
Query: 204 ----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
E + +FI ++K + ++VT+V++ SAC LG L H YV +K K +
Sbjct: 196 VSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYV--LKHNLKLNH 253
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ +LIDMY KCG +DLA ++F ++ + + +MI G+A +G ++ALD F M
Sbjct: 254 FVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGYGHQALDLFKKMTLE 313
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ VT V + +C H G V+EG FE MK VY +EP+ HYGC+VDLLGRAG L E
Sbjct: 314 GLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLGRAGRLRE 373
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A V MPMK N VIW L+GA GN+++GE V KHL +LEP + G YV+LSN+YAS
Sbjct: 374 AEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVLLSNMYAS 433
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
W++V+R+R +MK + K+P SL
Sbjct: 434 INRWDDVKRVRKLMKDHGINKVPGSSL 460
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 237/445 (53%), Gaps = 23/445 (5%)
Query: 22 LHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH 81
LH L H F ++ + A + +KC ++ +++ + +++
Sbjct: 32 LHSLIHKHGFDANIFVGTA-------------LVDMYAKCADMHSAVRVFDQMPERNLVS 78
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIG 140
WN++I + +A+ ++ + R V+P+ ++ VL A + L G
Sbjct: 79 -------WNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFG 131
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
RQ+H + V+ GL + + + +Y K F++ K+F +R + +WN ++ G Q+
Sbjct: 132 RQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQN 191
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ +EA + F +++ G PD+ + +V + SL L +H + +K +
Sbjct: 192 DKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI--IKLGYVKNMC 249
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+L SLI MY KCG + AY+VF I+ NV SWT+MI Y +G AN+ ++ F +M G
Sbjct: 250 ILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEG 309
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
I P+HVTFV VLSAC H G+V+EG F MK ++ + P HY CMVDLLGRAG L+EA
Sbjct: 310 IEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEA 369
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ +E MPMK +WG L+GAC K+GN+KMG A+ L E+EP++ G YV+L+N+
Sbjct: 370 KRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRS 429
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G EE +R +M + K P S
Sbjct: 430 GRLEEANEVRRLMGVNGVRKEPGCS 454
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 150/297 (50%), Gaps = 5/297 (1%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M +G P+ +T +L AS + G+QLHSL + G ++N F + + +Y+K D
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTS 230
A +VFD+ PER L SWN++I G + A+ +F L++ P++V++ SV S
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLS 120
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC ++G L QVH V VK T ++NSL+DMY KC D K+F + +V
Sbjct: 121 ACANMGGLNFGRQVHGVV--VKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDV 178
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W +++G+ N EA + F MR GI P+ +F VL + + +G +
Sbjct: 179 VTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQ 238
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ + ++ G ++ + + G L +A + EG+ NV+ W ++ A + G
Sbjct: 239 IIKLGYVK-NMCILGSLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHG 293
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 216/384 (56%), Gaps = 7/384 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + +A+ +++ R V P+ T +L A +L L +G+ +H L
Sbjct: 178 WTGLISGYVKTGLFNEAISLFL---RMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVF 234
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + +Y K ARK+FDE PE+ + SW ++I GL Q +E++D
Sbjct: 235 KCLYGEELVVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLD 294
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ GFEPD V + SV SAC SLG L+ VH+Y+ + K D + +L+DM
Sbjct: 295 LFSQMQASGFEPDGVILTSVLSACASLGLLDCGRWVHEYI--DCHRIKWDVHIGTTLVDM 352
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D+A ++F + N+ +W + I G A NG EAL F + ESG RPN VTF
Sbjct: 353 YAKCGCIDMAQRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTF 412
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ V +AC H G V EG+ +F EM +Y + P HYGCMVDLL RAGL+ EA +++ M
Sbjct: 413 LAVFTACCHNGLVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTM 472
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM +V I G L+ + +GNV + + K L +E G YV+LSN+YA+ W EV
Sbjct: 473 PMPPDVQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVR 532
Query: 448 RIRAVMKHRNLAKIPAYSLATRLD 471
+R +MK + ++K P S+ R+D
Sbjct: 533 SVRRLMKQKGISKAPGSSI-IRVD 555
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 182/375 (48%), Gaps = 37/375 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRT-----------------------HMLHSYSAAFHW----- 89
+ KC +L QI+AH++ + H ++ F W
Sbjct: 16 IHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWSLSSF 75
Query: 90 --NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N +I Y + P A+ IY + R G +PD YT P VLK+ + + RQ HS++
Sbjct: 76 PCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQFHSVS 135
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL + + ++ + +YS GD A KVF++ R + SW +I+G + G EAI
Sbjct: 136 VKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAI 195
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ + EP+ T VS+ ACG LG L L +H VF K + ++ N+++D
Sbjct: 196 SLFL---RMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVF--KCLYGEELVVCNAVLD 250
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC + A K+F E+ + ++ SWTSMI G E+LD F M+ SG P+ V
Sbjct: 251 MYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVI 310
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VLSAC G + G+ E + + ++I+ +VD+ + G ++ A+ + GM
Sbjct: 311 LTSVLSACASLGLLDCGRWVHEYI-DCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGM 369
Query: 388 PMKANVVIWGCLMGA 402
P K N+ W +G
Sbjct: 370 PSK-NIRTWNAYIGG 383
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 208/363 (57%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+AL+ + ++ + + P T + A L AL +G++LH ++ L+ S
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + A +VF+ E+ WN++I SQ+GR EAI++F + G D
Sbjct: 403 LDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDC 462
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
V++ SAC +L L ++H +K +SD +SLIDMY KCG ++ + +VF
Sbjct: 463 VSISGALSACANLPALHYGKEIHG--LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + N SW S+I Y +G E L FH M +GI+P+HVTF+G++SAC H G+V
Sbjct: 521 DRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG ++ +M Y I R HY C+ D+ GRAG L+EA + MP + +WG L+GA
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGA 640
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++ E +KHL +L+P + G YV+L+N+ A G W +V ++R++MK R + K+P
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700
Query: 463 AYS 465
YS
Sbjct: 701 GYS 703
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 134/249 (53%), Gaps = 3/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR +T + AL Y+ M AGV PD YT P V+KA C L ++++G+ +H
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+GL+ + F S I LY++ G A+ +FD P++ WN ++ G ++G + AI
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ +P+ VT V S C S L+L Q+H V + D+ + N+L+ M
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG--IAVSCGLELDSPVANTLLAM 203
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + A K+F Q ++ SW +I GY NGL EA F M +GI+P+ +TF
Sbjct: 204 YSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 329 VGVLSACVH 337
L CV+
Sbjct: 264 ASFL-PCVN 271
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + A+ I++ M + + P+ T VL L++G QLH +AV
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLE + + +++YSK + ARK+FD +P+ L SWN II+G Q+G EA
Sbjct: 187 SCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ G +PD +T S L L+ ++H Y+ ++ D + ++LID+
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYI--IRHAVVLDVFLKSALIDI 304
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC +++A K+ + + T+MI GY NG EAL+ F ++ + ++P VTF
Sbjct: 305 YFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGM 387
+ A + GK + E H G ++D+ + G L+ A + +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEK--CHVGSAILDMYAKCGRLDLACRVFNRI 422
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + + W ++ +C + G
Sbjct: 423 TEK-DAICWNSMITSCSQNG 441
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 114/216 (52%), Gaps = 8/216 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN++I ++ P +A++++ M G DC ++ L A L AL G+++H
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L ++ L S+ + ES I +Y+K G+ +R+VFD ER SWN+II+ G KE
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKE 546
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLML 262
+ +F + + G +PD VT + + SACG G ++ ++ + + + + ++ +
Sbjct: 547 CLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEH----Y 602
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ DM+G+ GR+D A++ + P+ W +++
Sbjct: 603 ACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLL 638
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y + G + A+ +F +WN +I G + G+ A+ ++ + G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
V AC L +++ VH+ V + K+ D + +SLI +Y + G + A +F
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKE--DVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I Q + W M+ GY NG + A+ F MR S I+PN VTF VLS C + G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 345 KHFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW-GCLMGA 402
+ + +++ A+ ++ + + L+ AR + + P ++++V W G + G
Sbjct: 179 TQLHGIAVSCGLELDSPVAN--TLLAMYSKCQCLQAARKLFDTSP-QSDLVSWNGIISGY 235
Query: 403 CEKFGNVKMGEWVAKHL 419
+ N MGE A+HL
Sbjct: 236 VQ---NGLMGE--AEHL 247
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG--DFEKARKVFDENP 183
+ AS ++ + LH+L ++G E N + + Y+K G D E ARKVFD
Sbjct: 57 VAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TM 115
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLGDLELA 241
ER + SWN++IA +Q+G + EAI ++ + G + + V + +V AC G ++
Sbjct: 116 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 175
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H V V+ + + + S++DMY KCGR+++A + F +I + N+ SW++MI GY
Sbjct: 176 KHIHNQV--VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 233
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+G EAL+ F M+ SG+RPN++TF+ VL+AC H G + EG++++ MK + IE
Sbjct: 234 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 293
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
HYGCMVDLLGRAG L+EA ++++ M +K + IWG L+ AC NV++ E K L E
Sbjct: 294 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 353
Query: 422 LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L+ + G YV+LSNIYA G+W++VERIR ++K R + K P YS
Sbjct: 354 LDASNSGYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYS 397
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 114/215 (53%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I LY + +A+ +Y M G+ + L VL A A++ G+ +H+
Sbjct: 122 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
VR+GLE N + + + +YSK G E A + F + E+ + SW+A+I G GR +EA
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 241
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLN 263
+++F +K+ G P+ +T +SV +AC G L+ +Y + ++ ++
Sbjct: 242 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG----RYWYNAMKQEFGIEAGVEHYG 297
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G +D AY + E+ +P+ + W +++
Sbjct: 298 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 332
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 215/365 (58%), Gaps = 2/365 (0%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y++ ++AL +Y+ M + P + LKA L L +GR +H+ V+ +
Sbjct: 5 YSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPD 64
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
+ +G + LY++ F + KVFD+ PER + SWN++I+G ++ + EA+D+F +++
Sbjct: 65 QVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRRMQR 124
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
G VT+ ++ C + L ++H + VKS ++ D L+LNSL+DMY KCG +
Sbjct: 125 EGMGFSWVTLTTILPICARVTALLSGKEIHAQI--VKSARRPDVLVLNSLVDMYVKCGVV 182
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
D ++F + +++SW +M+ GYA NG A+D F+ M GIRP+ VTF+ +LS C
Sbjct: 183 DYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGIRPDDVTFIALLSGC 242
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
H G ++G+ F M+ + + P HY C+VD+LGRAG ++ A +V+ MPMK + I
Sbjct: 243 SHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSI 302
Query: 396 WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKH 455
WG L+ +C V + E +A L ELEP++ G YV+LSNIYA+ G+W+ V +R +M+
Sbjct: 303 WGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQT 362
Query: 456 RNLAK 460
R + K
Sbjct: 363 RRIRK 367
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 1/193 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + + +ALD++ M R G+ TL +L ++ AL G+++H+ V
Sbjct: 99 WNSLISGFVKEDKLGEALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIV 158
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + + +Y K G + R++FD + L SWN ++ G + +G + A+D
Sbjct: 159 KSARRPDVLVLNSLVDMYVKCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMD 218
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + CG PDDVT +++ S C G E ++ + ++ L+DM
Sbjct: 219 LFNEMASCGIRPDDVTFIALLSGCSHAGLTEDGQKLF-HRMEMDFGVSPSLEHYACLVDM 277
Query: 269 YGKCGRMDLAYKV 281
G+ GR+D A V
Sbjct: 278 LGRAGRIDAALVV 290
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G S++G +EA+ +++ + EP + + AC L +L + VH V VKS +
Sbjct: 4 GYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQV--VKSSE 61
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D ++ N L+ +Y +C + KVF ++ + NV+SW S+I G+ EALD F
Sbjct: 62 GPDQVVNNGLLRLYTQCECFNEVLKVFDQMPERNVASWNSLISGFVKEDKLGEALDVFRR 121
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRA 374
M+ G+ + VT +L C + GK +++K+ + P +VD+ +
Sbjct: 122 MQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARR--PDVLVLNSLVDMYVKC 179
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLM 400
G+++ R + +GM K ++ W ++
Sbjct: 180 GVVDYGRRLFDGMRSK-DLTSWNTML 204
>gi|356524110|ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
mitochondrial-like [Glycine max]
Length = 611
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 241/432 (55%), Gaps = 14/432 (3%)
Query: 46 THEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTR---LEAP 102
H + + L ++L Q N YA + H + S F WN +IR+Y R
Sbjct: 52 NHPNAIFLYTNILQHYSSLTQPNLTYATRVFHHFPNPNS--FMWNTLIRVYARSTNTNHK 109
Query: 103 KKALDIY---IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
KA+++Y + M +PD +T PIVLKA F+L G+Q+H+ ++ G ES+ +
Sbjct: 110 HKAMELYKTMMTMEEKTAVPDNHTFPIVLKACAYTFSLCEGKQVHAHVLKHGFESDTYIC 169
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ + Y+ G + A K+F + ER SWN +I ++ G A+ MF +++ +
Sbjct: 170 NSLVHFYATCGCLDLAEKMFYKMSERNEVSWNIMIDSYAKGGIFDTALRMFGEMQRV-HD 228
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLA 278
PD TM SV SAC LG L L L VH Y+ + K D +++N+ L+DMY K G +++A
Sbjct: 229 PDGYTMQSVISACAGLGALSLGLWVHAYILKKCDKNMVDDVLVNTCLVDMYCKSGELEIA 288
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVH 337
+VF + ++++W SMI+G A +G A AL+ + M + I PN +TFVGVLSAC H
Sbjct: 289 KQVFESMAFRDLNAWNSMILGLAMHGEAKAALNYYVRMVKVEKIVPNSITFVGVLSACNH 348
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V EG F+MM Y +EPR HYGC+VDL RAG + EA +V M +K + VIW
Sbjct: 349 RGMVDEGIVHFDMMTKEYNVEPRLEHYGCLVDLFARAGRINEALNLVSEMSIKPDAVIWR 408
Query: 398 CLMGA-CEKFGNVKMGEWVAKHLQELEP--WSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L+ A C+++ +V++ E +AK + E E S G YV+LS +YAS W +V +R +M
Sbjct: 409 SLLDACCKQYASVELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMS 468
Query: 455 HRNLAKIPAYSL 466
+ + K P S+
Sbjct: 469 EKGVTKEPGCSI 480
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 246/454 (54%), Gaps = 12/454 (2%)
Query: 19 HPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCT--NLLQLNQIYAHIIR 76
HP+L L + R + AA+ PA +V L+ CT + + YA +
Sbjct: 26 HPVLSHLPHCTSLRTLAQLHAAAVKAGLAAHPA-LVTRLLTLCTGPDAGPAHLAYARQVF 84
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKK-----ALDIYIFMSRAGVLPDCYTLPIVLKAS 131
+ H A + +N ++R Y R P A+ +++ M GV PD YT +LKA
Sbjct: 85 DRVPHPADAVW-YNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVAPDTYTFVSLLKAC 143
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
A E GRQ H+LAV+LG +++ I++Y++ GD AR +F + S+N
Sbjct: 144 AAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVMFGGTDGGCVVSYN 203
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
A+IA + R EA+ +F ++ G +P VT++SV SAC LG LEL VH YV ++
Sbjct: 204 AMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGALELGRWVHDYVRKI 263
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
S + +LIDMY KCG ++ A VF ++ + +W+ MIV YA +G EA+
Sbjct: 264 --GLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVAYANHGYGREAIS 321
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F M++ G++P+ +TF+GVL AC H G V EG +F+ MK+ + I P HYGC+ DLL
Sbjct: 322 LFEEMKKEGMKPDDITFLGVLYACSHSGLVSEGLQYFDDMKD-HGIVPGIKHYGCVTDLL 380
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
R+G LE A ++ +P+ ++W L+ AC G+ ++G+ V + + +L+ G YV
Sbjct: 381 ARSGQLERAYKFIDELPINPTPILWRTLLSACGGHGDFELGKRVFERILKLDDSHGGDYV 440
Query: 432 VLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ SN+ A+ G WEE+ +R +M + + K+P S
Sbjct: 441 IFSNLCANTGYWEEMNMVRKLMSEKGVVKVPGCS 474
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 223/377 (59%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I + + +KAL+I+ M RA V+P+ +T VL+AS + +L++ + +H A+
Sbjct: 216 WSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHAL 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL ++ F + ++ Y+K G E++ ++F+ +R SWN II Q G + A+
Sbjct: 276 KAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALS 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + + +VT S+ AC +L LEL LQVH K+ D + N+LIDM
Sbjct: 336 LFSNMLRYQVQATEVTYSSILRACATLAALELGLQVH--CLTAKTIYGQDVAVGNALIDM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A +F +D + SW ++I GY+ +GL EA+ F+ M+E+ +P+ +TF
Sbjct: 394 YAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTF 453
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC + G++ EGK +F MK Y IEP HY CMV L+GR+G L++A +E +P
Sbjct: 454 VGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIP 513
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +V+IW L+GAC +V++G A+ + ELEP + ++V+LSNIYA W V
Sbjct: 514 FEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAY 573
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + + K P S
Sbjct: 574 VRKHMKRKGVKKEPGLS 590
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 168/350 (48%), Gaps = 14/350 (4%)
Query: 45 DTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK 104
+T A I A +S C ++ + +++ I M+ W +I Y + +
Sbjct: 80 NTFIGTALIDAYSVSGCVSMAR--EVFDEISSKDMVS-------WTGMIASYAENDCFSE 130
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
AL+ + M AG P+ +T VLKA L + G+ +H ++ E + + G +
Sbjct: 131 ALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLE 190
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
LY++ GD + A + F + P+ + W+ +I+ +Q G++++A+++F +++ P+ T
Sbjct: 191 LYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFT 250
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
SV A + L+L+ +H + +K+ +D + N+L+ Y KCG ++ + ++F
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHA--LKAGLSTDVFVSNALMACYAKCGCIEQSMELFEA 308
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ N SW ++IV Y G AL F M ++ VT+ +L AC ++ G
Sbjct: 309 LSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELG 368
Query: 345 KHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+ K +Y + + ++D+ + G +++AR M + + ++ V
Sbjct: 369 LQVHCLTAKTIYGQDVAVGN--ALIDMYAKCGSIKDARFMFDMLDLRDKV 416
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 39/341 (11%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
++H Y+ + + L+ RL L+ ++F + VLK + E
Sbjct: 17 LIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTT-------------VLKLLVSMEWAE 63
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+GR +H +++G SN F + I YS +G AR+VFDE + + SW +IA +
Sbjct: 64 LGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYA 123
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
++ EA++ F ++ GF+P++ T V AC L + + VH V +K+ + D
Sbjct: 124 ENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSV--LKTNYERD 181
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ L+++Y +CG D A++ F ++ + +V W+ MI +A +G + +AL+ F MR
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 319 SGIRPNHVTFVGVLSA-----------CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+ + PN TF VL A +HG ++ G + +V+ A Y
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAG-----LSTDVFVSNALMACY--- 293
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ G +E++ + E + + N V W ++ + + G+
Sbjct: 294 ----AKCGCIEQSMELFEALSDR-NDVSWNTIIVSYVQLGD 329
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 8/221 (3%)
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VFDE PER S+ +I G +Q + EA ++F L G E + +V S+
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
EL VH V +V S+T + +LID Y G + +A +VF EI ++ SWT MI
Sbjct: 62 AELGRIVHGCVLKV--GYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMI 119
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQ 356
YA N +EAL+ F MR +G +PN+ TF GVL AC+ GK ++K Y+
Sbjct: 120 ASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYE 179
Query: 357 IEPRFAHYGC-MVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
R + G +++L R G ++A MP K +V+ W
Sbjct: 180 ---RDLYVGVGLLELYTRCGDNDDAWRAFGDMP-KNDVIPW 216
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 230/442 (52%), Gaps = 66/442 (14%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +I+ LE K IY + P+ +T P + KA A++ GRQ+H
Sbjct: 99 FIWNIVIK--GCLENNKLFKAIYFYGRMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHG 156
Query: 146 LAVRLGL------------------------------ESNEFCESGFISLYSKAGDFEKA 175
V+ G+ ES+ C + I Y K G E A
Sbjct: 157 HVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAA 216
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDG-------------------------------RAK 204
+ +F + P + +GSWN +I GL++ G R K
Sbjct: 217 KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYK 276
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+++F +++ P + SV +AC ++G ++ VH Y+ ++ K D ++ +
Sbjct: 277 EALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYL--KRNSIKLDAVLGTA 334
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+DMY KCGR+D+ ++VF E+ + + +W +MI G A +G A +AL+ F ++E ++PN
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+T VGVL+AC H G V +G F+ M+ Y ++P HYGCMVDLLGR+GL EA ++
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MPMK N +WG L+GAC GN + E V K L ELEP + G YV+LSNIYA G ++
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFD 514
Query: 445 EVERIRAVMKHRNLAKIPAYSL 466
+V +IR +MK+R + +P S+
Sbjct: 515 DVSKIRKLMKNRGIKTVPGVSI 536
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 153/366 (41%), Gaps = 28/366 (7%)
Query: 97 TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK--ASCQLFALEIGRQLHSLAVRLGLES 154
+ L +P K +D F + + VLK S + +L+ QLH+L +R G
Sbjct: 7 SHLPSPFKPVD---FSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQ 63
Query: 155 NEFCESGFISLYSKA--GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ + + Y+ +F+ A KVF P + WN +I G ++ + +AI F G
Sbjct: 64 DHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAI-YFYG 122
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
P+ T ++ AC ++ Q+H +V VK SD + ++ I MY
Sbjct: 123 RMVIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHV--VKHGIGSDVHIKSAGIQMYASF 180
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
GR++ A K+F+ + +V W +MI GY G+ A F M I +V G+
Sbjct: 181 GRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGL- 238
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM---PM 389
GG + + + F+ M +I + MVD AG +EA + + M
Sbjct: 239 ---AKGGNLGDARKLFDEMSERDEIS-----WSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY-VVLSNIYASRGL----WE 444
+ I ++ AC G + G WV +L+ D L ++YA G WE
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 445 EVERIR 450
E ++
Sbjct: 351 VFEEMK 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 38/252 (15%)
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK--CGRMDLAYKVFWEIDQPNVS 291
S+ L+ Q+H V ++S D + +L+ Y D A KVF I PNV
Sbjct: 42 SITSLQYLTQLHALV--LRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVF 99
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF--- 348
W +I G N +A+ + M RPN T+ + AC VQEG+
Sbjct: 100 IWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHV 158
Query: 349 --------------------------EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
+ K Y E + M+D + G+LE A+
Sbjct: 159 VKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKG 218
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ MP+K N+ W ++ K GN +G+ K E+ + ++ + + Y S G
Sbjct: 219 LFAQMPVK-NIGSWNVMINGLAKGGN--LGD-ARKLFDEMSERDEISWSSMVDGYISAGR 274
Query: 443 WEEVERIRAVMK 454
++E I M+
Sbjct: 275 YKEALEIFQQMQ 286
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 206/355 (58%), Gaps = 2/355 (0%)
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
+ R G+ + T ++L+ + GR++H+ + +G +E+ ++ + L++K G
Sbjct: 81 LLCRTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILHAKTG 140
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
D + + +FD+ ++ L SWNA+IAG Q G +E ++++ +++ G PD T SV
Sbjct: 141 DLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFR 200
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC +L LE Q H +KS+ K + ++ ++L+DMY KC + ++VF + NV
Sbjct: 201 ACATLATLEKGKQAH--CVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNV 258
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+WT++I GY +G E L F M+ G RPN+VTF+ V+SAC HGG V EG +F
Sbjct: 259 ITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLVNEGWEYFMS 318
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M Y I+PR HY MVDLLGRAG L EA V+ P + VIWG L+GAC GN+
Sbjct: 319 MTRDYGIQPRGQHYAAMVDLLGRAGRLHEAFEFVQNSPCGEHSVIWGALLGACRVHGNID 378
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
M + AK +LEP + G YVVLSN YA+ GLW+ V +R VM+ + K P YS
Sbjct: 379 MLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAEVRGVMRESGMRKDPGYS 433
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 49/306 (16%)
Query: 62 TNLLQLNQIYAHIIRTHMLH---SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
T LL L+ + +H+L S + WN +I Y + ++ L++Y M ++G+
Sbjct: 130 TKLLILHAKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLT 189
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT V +A L LE G+Q H + ++ ++ N S + +Y K +V
Sbjct: 190 PDQYTFASVFRACATLATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRV 249
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+++ R + +W A+I+G Q GR E + F +K GF P+ VT ++V SAC G +
Sbjct: 250 FNKSLNRNVITWTALISGYGQHGRVAEVLVFFSKMKTEGFRPNYVTFLAVISACSHGGLV 309
Query: 239 ELALQ-----VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY-------------- 279
+ Y Q + + + +++D+ G+ GR+ A+
Sbjct: 310 NEGWEYFMSMTRDYGIQPRGQHYA------AMVDLLGRAGRLHEAFEFVQNSPCGEHSVI 363
Query: 280 ---------------------KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
K +++++ N + + YA GL + + MRE
Sbjct: 364 WGALLGACRVHGNIDMLRFAAKKYFDLEPENAGKYVVLSNAYATFGLWDNVAEVRGVMRE 423
Query: 319 SGIRPN 324
SG+R +
Sbjct: 424 SGMRKD 429
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 213/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y KA ++ M GV D +T ++ + L + +G+Q+H L +
Sbjct: 247 WNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLII 306
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RL + + S + +YSK + E ARK FD + + SW + G Q G KE +
Sbjct: 307 RLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMR 366
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + + PD++ + S+ S+CG+L +QVH YV V++ ++ + N+L+
Sbjct: 367 LLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYV--VENGFEAFLSIANALVSA 424
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A++ F + +P++ SWTS++ YA +GL+ + +D F + S +RP+ V F
Sbjct: 425 YSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAF 484
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC HGG V EG H+F +M NVYQI P HY ++DLLGRAG L+EA ++ MP
Sbjct: 485 LGVLSACAHGGFVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMP 544
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ G +GAC+ + NV + W ++ L +EP G Y ++SN+YAS G W +V R
Sbjct: 545 VEPRSDTLGAFLGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVAR 604
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ R K+P S
Sbjct: 605 VRKLMRERCDFKVPGCS 621
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 184/416 (44%), Gaps = 49/416 (11%)
Query: 26 CKTHTFRKH-VTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYS 84
C TH+F H + ISA FL + V +L C NLL L + +LH Y
Sbjct: 70 CSTHSFSSHALKISAKLGFLHGGKQLHAHV-IKLGXC-NLLSL--------QNQVLHVYV 119
Query: 85 AAFHWNNIIRLYTRLEAPKKAL-------------DIYIFMSRAG-----------VLPD 120
+N++ +++ E P K + + + R G + P+
Sbjct: 120 KCKEFNDVCKMFD--EMPLKNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPN 177
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
C TL +L+AS +L + I RQLH ++ G +SN F S + Y+K G ++A+ FD
Sbjct: 178 CITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD 237
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
E R L WN +++ + +G +A +F ++ G + D T S+ ++CG LG L
Sbjct: 238 EVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGL 297
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
QVH + ++ D L+ ++L+DMY K ++ A K F + N+ SWT+M VGY
Sbjct: 298 GKQVHGLIIRLSFDL--DVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGY 355
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+G E + M P+ + +LS+C G + ++ + Y +E
Sbjct: 356 GQHGDGKEXMRLLQEMIRVYTYPDELALASILSSC---GNLSATSEVVQV--HAYVVENG 410
Query: 361 FAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
F + +V + G + A + + +++ W LMGA G K G
Sbjct: 411 FEAFLSIANALVSAYSKCGSIGSAFQSFSSVA-EPDIISWTSLMGAYAFHGLSKQG 465
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 222/387 (57%), Gaps = 4/387 (1%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
HS +N ++ Y A+ ++ M+ GV + TL ++ A LE+
Sbjct: 102 FHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLEL 161
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G LH ++ G +S+ + FI++Y K G A+K+FDE P + L SWNA+++G +Q
Sbjct: 162 GSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ 221
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK-SKQKSD 258
+G A ++++ + G PD VT+V V S+C +LG + H+ F+++ S S+
Sbjct: 222 NGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG---HEVEFKMQASGFTSN 278
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ N+LI+MY +CG + A VF + + + SWT++I GY +G A+ F M
Sbjct: 279 PFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIR 338
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
SGI P+ FV VLSAC H G +G +F+MMK YQ+EP HY CMVDLLGRAG L+
Sbjct: 339 SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLK 398
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA+ ++E MP+K + +WG L+GAC+ NV++ E + + ELEP + G YV+LSNIY+
Sbjct: 399 EAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYS 458
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + V RIR +MK + L K P S
Sbjct: 459 NANNSKGVLRIRIMMKEKKLKKDPGCS 485
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 201/391 (51%), Gaps = 30/391 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLA 147
WN +R + +AL +Y M R G P+ +T P LK SC +L I G Q H
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALK-SCAALSLPILGSQFHGQI 66
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-PERKLG-SWNAIIAGLSQDGRAKE 205
++G F ++G IS+Y K + ARKVF+EN RKL +NA+++G + + +
Sbjct: 67 TKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSD 126
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH----KYVFQVKSKQKSDTLM 261
A+ +F + + G + VT++ + AC S +LEL +H KY F SD +
Sbjct: 127 AVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFD------SDVSV 180
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+N I MY KCG ++ A K+F E+ + SW +M+ GYA NGLA L+ + M +G+
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ VT VGVLS+C + G G F+M + + P + ++++ R G L +A
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTKA 298
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL-----EPWSDG-AYVVLS 434
+A+ +GMP + +V W ++G +G GE + +E+ EP DG A+V +
Sbjct: 299 QAVFDGMPERT-LVSWTAIIGG---YGMHGHGEIAVQLFKEMIRSGIEP--DGTAFVCVL 352
Query: 435 NIYASRGLWEE-VERIRAVMKHRNLAKIPAY 464
+ + GL ++ +E + + ++ L P +
Sbjct: 353 SACSHAGLTDQGLEYFKMMKRNYQLEPGPEH 383
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/412 (36%), Positives = 228/412 (55%), Gaps = 35/412 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W +I + +++ +KAL +Y M ++ + P+ + +L A Q ++E GRQ HSL
Sbjct: 462 FSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSL 521
Query: 147 AVRLGLESNEFCESGFISLY-------------------------------SKAGDFEKA 175
V+ G +F ++ IS Y +K G ++A
Sbjct: 522 IVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQA 581
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R++FD PE+ + SW+ +I+G +Q+ A+D+F G+ EP+++TMVSV SA +L
Sbjct: 582 RQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAAL 641
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--PNVSSW 293
G L H+YV K +D L ++IDMY KCG +D A VF +I VS W
Sbjct: 642 GKLPEGRWAHEYVCN-KVIPLNDNLS-AAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPW 699
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++I G A +G AN +L+ F ++ I+ N +TF+GVLSAC H G V+ G+ +F MK
Sbjct: 700 NAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKT 759
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ +EP HYGC+VDLLGR G L EA +V MPMKA+VVIWG L+ + G V++GE
Sbjct: 760 QHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGE 819
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A++L L+P V+LSN+YA GLWE+ +R ++ + + + P YS
Sbjct: 820 RAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYS 871
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 68/382 (17%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A++++ M AGV P+ T+ V+ A + + R LH+L ++L + +
Sbjct: 347 EAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLL 406
Query: 164 SLYS-------------------------------KAGDFEKARKVFDENPERKLGSWNA 192
+Y K+G ++AR++F+ PER + SW
Sbjct: 407 HMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAI 466
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+I G Q R ++A+ ++ ++K P++V +V + SACG +E Q H + VK
Sbjct: 467 MIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLI--VK 524
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAY-------------------------------KV 281
+ + ++I Y C R+DLAY ++
Sbjct: 525 NGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQI 584
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + +V SW++MI GYA N L + ALD FH M +S + PN +T V V SA GK+
Sbjct: 585 FDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKL 644
Query: 342 QEGKHFFEMMKN-VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-IWGCL 399
EG+ E + N V + + ++D+ + G ++ A + + K + V W +
Sbjct: 645 PEGRWAHEYVCNKVIPLNDNLS--AAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAI 702
Query: 400 MGACEKFGNVKMGEWVAKHLQE 421
+ G+ + + +LQ
Sbjct: 703 ICGLAMHGHANLSLEIFSNLQR 724
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 152/355 (42%), Gaps = 91/355 (25%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG------------------------- 170
A+ G+Q+H++ ++ G SN F + I++Y K G
Sbjct: 247 AISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMS 306
Query: 171 ------DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
E AR++F + PER S+ +I GL+Q+ EAI++F ++ G P++VT
Sbjct: 307 GYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVT 366
Query: 225 MVSVTSACGSLGDL-------ELALQVHKY--------------VFQVKSKQK------- 256
M SV SAC +G + L +++H + VF K
Sbjct: 367 MASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMP 426
Query: 257 -SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+T+ N ++ Y K G +D A ++F I + +V SW MI G+ +AL +
Sbjct: 427 VRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSA 486
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-KNVY------------------Q 356
MR+S + PN V V +LSAC ++EG+ F ++ KN + +
Sbjct: 487 MRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRR 546
Query: 357 IEPRFAHY-----------GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
I+ + Y M+ + G++++AR + + MP K +V W ++
Sbjct: 547 IDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK-DVFSWSTMI 600
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 148/367 (40%), Gaps = 72/367 (19%)
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEI----GRQLHSLAVRLGLESNEFCESGFISLYSK 168
SR P C L ++ QL E +++ L + G E+N E L
Sbjct: 116 SRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKM 175
Query: 169 AGDFEKARKVFDEN---PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD---- 221
A +A +F P KL W G + R K+A+ +GL +P
Sbjct: 176 APPNGRAVLLFRARCGCPIAKLEGW-----GTKRGRRHKKALAT-LGLNGGRDQPSSSSL 229
Query: 222 --DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG------ 273
++++VS C S + Q+H V +K S+T +LNSLI+MY KCG
Sbjct: 230 DCELSVVSALKYCASSSAISSGQQIHAIV--LKYGFNSNTFILNSLINMYVKCGLLSSAR 287
Query: 274 -------------------------RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
+++ A ++F ++ + S+T+MI+G A N E
Sbjct: 288 LLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGE 347
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK---------HFFEMMKNVYQIEP 359
A++ F MR +G+ PN VT V+SAC H G + + HFF ++ I
Sbjct: 348 AIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLV----LIST 403
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
H C+ L++ + + MP++ N V W ++ K G V + + +
Sbjct: 404 NLLHMYCVFS------SLKDTKRLFNEMPVR-NTVSWNVMLKGYVKSGLVDQARELFERI 456
Query: 420 QELEPWS 426
E + +S
Sbjct: 457 PERDVFS 463
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 215/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I + +A+ ++ + R V+P+ ++ VL A + L GRQ+H +
Sbjct: 314 WNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVV 373
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL + + + +Y K F++ K+F +R + +WN ++ G Q+ + +EA
Sbjct: 374 VKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEAC 433
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ F +++ G PD+ + +V + SL L +H + +K + +L SLI
Sbjct: 434 NYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI--IKLGYVKNMCILGSLIT 491
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + AY+VF I+ NV SWT+MI Y +G AN+ ++ F +M GI P+HVT
Sbjct: 492 MYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVT 551
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV VLSAC H G+V+EG F MK ++ + P HY CMVDLLGRAG L+EA+ +E M
Sbjct: 552 FVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESM 611
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PMK +WG L+GAC K+GN+KMG A+ L E+EP++ G YV+L+N+ G EE
Sbjct: 612 PMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEAN 671
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R +M + K P S
Sbjct: 672 EVRRLMGVNGVRKEPGCS 689
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 167/342 (48%), Gaps = 7/342 (2%)
Query: 67 LNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI 126
LNQ TH H + W ++I + +AL ++ M +G P+ +T
Sbjct: 193 LNQALLLFSITH--HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSS 250
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L AS + G+QLHSL + G ++N F + + +Y+K D A +VFD+ PER
Sbjct: 251 ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERN 310
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
L SWN++I G + A+ +F L++ P++V++ SV SAC ++G L QVH
Sbjct: 311 LVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVH 370
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
V VK T ++NSL+DMY KC D K+F + +V +W +++G+ N
Sbjct: 371 GVV--VKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDK 428
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
EA + F MR GI P+ +F VL + + +G + + + ++ G
Sbjct: 429 FEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVK-NMCILG 487
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++ + + G L +A + EG+ NV+ W ++ A + G
Sbjct: 488 SLITMYAKCGSLVDAYQVFEGIE-DHNVISWTAMISAYQLHG 528
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 15/281 (5%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPE 184
+L + Q +L+ Q+H+ + S F + I+LY+K G +A +F +
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS----LGDLEL 240
+ + +W ++I LS +A+ +F ++ G P+ T S+ SA + L +L
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
+HK+ F ++ + +L+DMY KC M A +VF ++ + N+ SW SMIVG+
Sbjct: 268 HSLIHKHGFD------ANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGF 321
Query: 301 AANGLANEALDCFH-YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
N L + A+ F +RE + PN V+ VLSAC + G + G+ ++ Y + P
Sbjct: 322 FHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVK-YGLVP 380
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + +E + + + + +VV W L+
Sbjct: 381 LTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR-DVVTWNVLV 420
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 207/363 (57%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+AL+ + ++ + + P T + A L AL +G++LH ++ L+ S
Sbjct: 343 KEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAI 402
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + A +VF+ E+ WN++I SQ+GR EAI++F + G D
Sbjct: 403 LDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDC 462
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
V++ SAC +L L ++H +K +SD +SLIDMY KCG ++ + +VF
Sbjct: 463 VSISGALSACANLPALHYGKEIHG--LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVF 520
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ + N SW S+I Y +G E L FH M +GI+P+HVTF+G++SAC H G+V
Sbjct: 521 DRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVD 580
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG ++ +M Y I R HY C+ D+ GRAG L EA + MP + +WG L+GA
Sbjct: 581 EGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGA 640
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++ E +KHL +L+P + G YV+L+N+ A G W +V ++R++MK R + K+P
Sbjct: 641 CHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVP 700
Query: 463 AYS 465
YS
Sbjct: 701 GYS 703
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 3/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR +T + AL Y+ M AGV PD YT P V+KA C L ++++G+ +H
Sbjct: 26 WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVN 85
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+GL+ + F S I LY++ G A+ +FD P++ WN ++ G ++G + AI
Sbjct: 86 LMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIK 145
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ +P+ VT V S C S L+L Q+H V + D+ + N+L+ M
Sbjct: 146 IFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHG--IAVGCGLELDSPVANTLLAM 203
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + A K+F + Q ++ SW +I GY NGL EA F M +GI+P+ +TF
Sbjct: 204 YSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITF 263
Query: 329 VGVLSACVH 337
L CV+
Sbjct: 264 ASFL-PCVN 271
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + A+ I++ M + + P+ T VL L++G QLH +AV
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GLE + + +++YSK + ARK+FD P+ L SWN II+G Q+G EA
Sbjct: 187 GCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEH 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ G +PD +T S L L+ ++H Y+ ++ D + ++LID+
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYI--IRHAVVLDVFLKSALIDI 304
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC +++A K + + T+MI GY NG EAL+ F ++ + ++P VTF
Sbjct: 305 YFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGM 387
+ A + GK + E H G ++D+ + G L+ A + +
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEK--CHVGSAILDMYAKCGRLDLACRVFNRI 422
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + + W ++ +C + G
Sbjct: 423 TEK-DAICWNSMITSCSQNG 441
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 113/216 (52%), Gaps = 8/216 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN++I ++ P +A++++ M G DC ++ L A L AL G+++H
Sbjct: 427 AICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHG 486
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L ++ L S+ + ES I +Y+K G+ +R+VFD E+ SWN+II+ G KE
Sbjct: 487 LMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKE 546
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV---FQVKSKQKSDTLML 262
+ +F + + G +PD VT + + SACG G ++ ++ + + + + ++ +
Sbjct: 547 CLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEH----Y 602
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ DM+G+ GR+ A++ + P+ W +++
Sbjct: 603 ACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLL 638
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 12/257 (4%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y + G + A+ +F +WN +I G + G+ A+ ++ + G PD T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
V AC L +++ VH+ V + K+ D + +SLI +Y + G + A +F
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKE--DVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
I Q + W M+ GY NG + A+ F MR S I+PN VTF VLS C + G
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178
Query: 345 KHFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW-GCLMGA 402
+ +++ A+ ++ + + L+ AR + + +P ++++V W G + G
Sbjct: 179 TQLHGIAVGCGLELDSPVAN--TLLAMYSKCQCLQAARKLFDTLP-QSDLVSWNGIISGY 235
Query: 403 CEKFGNVKMGEWVAKHL 419
+ N MGE A+HL
Sbjct: 236 VQ---NGLMGE--AEHL 247
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN++I+ Y A ++ M G +P V+ A+C+ L +GR L
Sbjct: 200 WNSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWV 259
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+G+E S + +Y K G+ +AR+VFD + +WNA+I G +Q+G +KEAI
Sbjct: 260 KSVGMEVGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAI 319
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +++ G PD +T+V V SAC ++G LEL ++ +Y Q S+ + +L+D
Sbjct: 320 SLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQ--RGFYSNVYVGTALVD 377
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG + A +VF ++ N +SW ++I G A NG EA+ F MR + G+RP+ +
Sbjct: 378 MYSKCGDLTRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDI 437
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G +++G+ +F+ + + +QI P+ HY CMVDLL RAG LEEA +E
Sbjct: 438 TFIGVLSACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEK 497
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++ V + LEP + YVV S IYAS ++
Sbjct: 498 IPGKPDAVMLGALLAACRKCKNVEVSVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDS 557
Query: 447 ERIRAVMKHRNLAKIPAYS 465
R+R +M+ R ++KIP S
Sbjct: 558 ARMRGLMRERGVSKIPGCS 576
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 170/334 (50%), Gaps = 14/334 (4%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
Y H++ T H AF +N +R + P+ L + + M RA + PD YTLP +L A
Sbjct: 84 YVHLLLT--AHPTPTAFSFNVALRFFA-ASRPRTTLQLSLRMLRAALRPDAYTLPFLLLA 140
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+ + A H+L +LGL +++ +++YS G AR+VFD R + SW
Sbjct: 141 AARCPAPAFAASAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSW 200
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
N++I G +A MF + G P+ VT+ V +AC GDL L + ++V
Sbjct: 201 NSMIKAYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVK 260
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
V + S L+ ++L+ MY KCG M A +VF I + +W ++I GYA NG++ EA
Sbjct: 261 SVGMEVGS--LVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEA 318
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-C 366
+ FH MR++G RP+ +T VGVLSAC G ++ G + + + Y + G
Sbjct: 319 ISLFHSMRQAGARPDKITLVGVLSACAAVGALELGTELDRYALQRGFYS----NVYVGTA 374
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ + G L A + E +P K N W L+
Sbjct: 375 LVDMYSKCGDLTRAIQVFEKLPCK-NEASWNALI 407
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 220/409 (53%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + +A+ IY M V P+ T+ ++ + Q+ L +G++ H
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
GLE + + +Y K G+ AR +FD
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ PE+ + WNAII+G Q + KEA+ +F ++ EPD VTMV+ SAC LG
Sbjct: 347 ILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L++ + +H Y+ + K D + +L+DMY KCG + A +VF EI Q N +WT++I
Sbjct: 407 LDVGIWIHHYI--ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVI 464
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G A +AL F M GI P+ +TF+GVLSAC HGG V+EG+ +F M + + +
Sbjct: 465 CGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNV 524
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY CMVDLLGRAG LEEA +V+ MPM A+ + G L AC +GNV++GE A
Sbjct: 525 SPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAF 584
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L E++P G YV+L+++Y+ +W+E R +M + + K P SL
Sbjct: 585 KLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSL 633
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 195/456 (42%), Gaps = 79/456 (17%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
+ H K + + SF+ E+P + + L +C +L+QL QI A ++ T ++
Sbjct: 32 IFHNSSSLSPITKTINWNTTHSFV--RENP---LLSILERCKSLVQLKQIQAQMVSTGLI 86
Query: 81 HSYSAA------------------------------FHWNNIIRLYTRLEAPKKALDIYI 110
+ AA F WN IR Y + +Y
Sbjct: 87 ENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYK 146
Query: 111 FMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M G L PD +T P++LK C ++ +G + ++ G E + F + I++
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G+ A VF+++ R L +WN++I G + G A EAI ++ ++ P+++TM+ +
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMI 266
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQP 288
S+C + DL L + H Y +K T+ L N+L+DMY KCG + A +F + Q
Sbjct: 267 SSCSQVQDLNLGKEFHCY---IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 289 NVSSWTSMIVGYAANGL-------------------------------ANEALDCFHYMR 317
+ SWT+M++GYA G EAL FH M+
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQ 383
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
I P+ VT V LSAC G + G H+ E +++ A +VD+ +
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER----HKLSIDVALGTALVDMYAKC 439
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G + A + E +P + N + W ++ GN +
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 224/412 (54%), Gaps = 37/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + +A+ ++ M G PD T+ VL A L + +G Q+H +
Sbjct: 208 WNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------------- 189
+ GL S++F S + +Y K G ++ +VFDE E ++GS
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALE 327
Query: 190 ----------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
W +IIA SQ+G+ EA+++F ++ G EP+ VT+ S+ ACG
Sbjct: 328 VFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACG 387
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
++ L ++H F ++ D + ++LIDMY KCGR+ LA + F ++ N+ SW
Sbjct: 388 NISALMHGKEIH--CFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSW 445
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+++ GYA +G A E ++ FH M +SG +P+ VTF VLSAC G +EG + M
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ IEP+ HY C+V LL R G LEEA ++++ MP + + +WG L+ +C N+ +GE
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGE 565
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L LEP + G Y++LSNIYAS+GLW+E RIR VMK + L K P YS
Sbjct: 566 IAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYS 617
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 46/364 (12%)
Query: 32 RKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHI-IRTHMLHSYSAAFHWN 90
+ H I + F DT ++ + LS N L L+ + + +H+ H F ++
Sbjct: 21 QAHALILRLNLFSDT-----QLTTSLLSFYANALSLSTPQLSLTLSSHLPHP--TLFSFS 73
Query: 91 NIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
++I + R L + + ++PD + LP +K+ L AL+ G+QLH+ A
Sbjct: 74 SLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAAS 133
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPER-------------KLG--------- 188
G ++ S +Y K ARK+FD P+R +LG
Sbjct: 134 GFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELF 193
Query: 189 -------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
SWN ++AG +G EA+ MF + GF PD T+ V A G L
Sbjct: 194 GEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCL 253
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
D+ + QVH YV +K SD ++++++DMYGKCG + +VF E+++ + S +
Sbjct: 254 EDVVVGAQVHGYV--IKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNA 311
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+ G + NG+ + AL+ F+ ++ + N VT+ ++++C GK E F M+ Y
Sbjct: 312 FLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQ-AY 370
Query: 356 QIEP 359
+EP
Sbjct: 371 GVEP 374
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 15/306 (4%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR---KVFDENPERKLGSWNA 192
+L RQ H+L +RL L S+ + +S Y+ A + + P L S+++
Sbjct: 15 SLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSS 74
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
+I ++ + F L PD + S +C SL L+ Q+H F
Sbjct: 75 LIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLH--AFAAA 132
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDC 312
S +D+++ +SL MY KC R+ A K+F + +V W++MI GY+ GL EA +
Sbjct: 133 SGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKEL 192
Query: 313 FHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
F MR G+ PN V++ G+L+ + G E F MM V P + C +L
Sbjct: 193 FGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMML-VQGFWPDGSTVSC---VLP 248
Query: 373 RAGLLEE--ARAMVEGMPMK----ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
G LE+ A V G +K ++ + ++ K G VK V ++E+E S
Sbjct: 249 AVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGS 308
Query: 427 DGAYVV 432
A++
Sbjct: 309 LNAFLT 314
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 210/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ YT+ K L ++ M + G D +TL V K LFA+ G+Q+H+ A+
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + + SG + +Y K GD A+ FD P +W +I+G ++G + A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD+ T+ ++ A L LE Q+H ++ +D + SL+DM
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT--NDPFVGTSLVDM 662
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D AY +F I+ N+++W +M+VG A +G E L F M+ GI+P+ VTF
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G V E M Y I+P HY C+ D LGRAGL+++A ++E M
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+A+ ++ L+ AC G+ + G+ VA L ELEP AYV+LSN+YA+ W+E++
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 842
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK + K P +S
Sbjct: 843 ARTMMKGHKVKKDPGFS 859
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 157/304 (51%), Gaps = 8/304 (2%)
Query: 106 LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
L + M + V D T ++L + ++ +L +G+Q+H +A++LGL+ + I++
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y K F AR VFD ER L SWN++IAG++Q+G EA+ +F+ L +CG +PD TM
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 226 VSVTSACGSLGD-LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
SV A SL + L L+ QVH V +K SD+ + +LID Y + M A ++ +E
Sbjct: 420 TSVLKAASSLPEGLSLSKQVH--VHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFE 476
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
++ +W +M+ GY + ++ L F M + G R + T V C + +G
Sbjct: 477 RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 345 KHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
K +K+ Y ++ + ++D+ + G + A+ + +P+ +V W ++ C
Sbjct: 537 KQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593
Query: 404 EKFG 407
+ G
Sbjct: 594 IENG 597
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 6/335 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-FALEIGRQLHSLA 147
WN++I + +A+ +++ + R G+ PD YT+ VLKA+ L L + +Q+H A
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++ S+ F + I YS+ ++A +F E L +WNA++AG +Q + +
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K G DD T+ +V CG L + QVH Y +KS D + + ++D
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA--IKSGYDLDLWVSSGILD 560
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG M A F I P+ +WT+MI G NG A F MR G+ P+ T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++G+ + F +VD+ + G +++A + + +
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS-LVDMYAKCGSIDDAYCLFKRI 679
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
M N+ W ++ + G K + K ++ L
Sbjct: 680 EM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L +G+ H+ + F + IS+YSK G AR+VFD+ P+R L SWN+I+A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 197 LSQDGRA-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
+Q ++A +F L++ +T+ + C G + + H Y ++
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
D + +L+++Y K G++ +F E+ +V W M+ Y G EA+D
Sbjct: 175 --GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 312 CFHYMRESGIRPNHVTF 328
SG+ PN +T
Sbjct: 233 LSSAFHSSGLNPNEITL 249
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 124/312 (39%), Gaps = 50/312 (16%)
Query: 44 LDTHEDPAKIVATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTR- 98
L E+P + + L SKC +L +++ + ++ WN+I+ Y +
Sbjct: 66 LTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-------WNSILAAYAQS 118
Query: 99 ----LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
+E ++A ++ + + V TL +LK + H A ++GL+
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
+EF +++Y K G ++ + +F+E P R + WN ++ + G +EAID+
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
G P+++T+ + G D A QV + + S+ + N + Y G+
Sbjct: 239 SSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
Y+A L CF M ES + + VTF+ +L+
Sbjct: 296 -------------------------YSA------LLKCFADMVESDVECDQVTFILMLAT 324
Query: 335 CVHGGKVQEGKH 346
V + G+
Sbjct: 325 AVKVDSLALGQQ 336
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 224/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA----------SCQLFALE 138
WN++I Y++ K+ L ++ M V D T+ V+ A C + +E
Sbjct: 479 WNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIE 538
Query: 139 ---------IGRQLHSLAVRLGL------------ESNEFCESGFISLYSKAGDFEKARK 177
+G L R+G + N + I Y+K G+ A+K
Sbjct: 539 RNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKK 598
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ P + L SW+++I SQ +++++F +++ +PD V + SV SAC LG
Sbjct: 599 IFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGA 658
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L +H YV ++ K+DT+M NSLIDM+ KCG M A +VF E+++ + SW S+I
Sbjct: 659 LDLGKWIHDYVR--RNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSII 716
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NG +EAL+ F+ M G RPN VTF+GVL AC + VQEG FE MK V+ +
Sbjct: 717 LGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNL 776
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP+ HYGC+V +L RAG LE+A+ + MP+ + V+W L+GAC+ GNV + E K
Sbjct: 777 EPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATK 836
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L EL+P + G Y++LSNIYAS W + +R M + K PA S+
Sbjct: 837 KLSELDPSNSGDYMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSV 885
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/307 (39%), Positives = 191/307 (62%), Gaps = 3/307 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ ++ G+ E AR +FD+ P R + SW +I G ++ EA+ +F + G P +
Sbjct: 13 ITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSE 72
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T+++V A +LG + + +H Y VK SD + NSLID+Y K G + + KVF
Sbjct: 73 ITVLAVVPAISNLGGILMGEMLHGYC--VKKGIMSDARVGNSLIDLYAKIGSVQNSLKVF 130
Query: 283 WE-IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
E +D+ N+ SWTS+I G+A +GL+ EAL+ F MR +GIRPN +TF+ V++AC HGG V
Sbjct: 131 DEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLV 190
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
++G FF+ M Y I+P H+GC++D+LGRAG L EA ++EG+P++ NV++W L+G
Sbjct: 191 EQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLG 250
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
C K+G V+MG+ K + +LE S G + VLSN+ G + + E+ R ++ R + K+
Sbjct: 251 CCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKV 310
Query: 462 PAYSLAT 468
P +L
Sbjct: 311 PGLALVV 317
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 204/425 (48%), Gaps = 47/425 (11%)
Query: 5 VPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNL 64
VPG++L R S ++ + K H H+ +S + + +++ + L
Sbjct: 310 VPGLALVVTR---SFVMMEAVKKLHA---HLVVSGLHN--------CQYAMSKVIRSYAL 355
Query: 65 LQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTL 124
Q + ++AH + + F WN ++R + +APK A+ Y G+ PD T
Sbjct: 356 QQSDLVFAHKVFEQI--ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTF 413
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
P VLKA + +A + G Q+HS ++LG + F + I LY+ GD AR +FDE
Sbjct: 414 PFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLV 473
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA--- 241
+ + SWN++I G SQ R KE + +F ++ + D VTMV V SAC LGD +A
Sbjct: 474 KDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCM 533
Query: 242 --------LQVHKY-----------VFQVKSKQK-------SDTLMLNSLIDMYGKCGRM 275
++V Y + Q++S +K +T+ LN++I Y K G +
Sbjct: 534 VRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNL 593
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A K+F +I ++ SW+SMI Y+ +++L+ F M+ + ++P+ V VLSAC
Sbjct: 594 VSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSAC 653
Query: 336 VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
H G + GK + ++ I+ ++D+ + G ++EA + M K + +
Sbjct: 654 AHLGALDLGKWIHDYVRR-NNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEK-DTLS 711
Query: 396 WGCLM 400
W ++
Sbjct: 712 WNSII 716
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 138/302 (45%), Gaps = 43/302 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I YTR +A+ ++ M G+ P T+ V+ A L + +G LH V
Sbjct: 40 WTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCV 99
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK-LGSWNAIIAGLSQDGRAKEAI 207
+ G+ S+ + I LY+K G + + KVFDE +R+ L SW +II+G + G + EA+
Sbjct: 100 KKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEAL 159
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK---YVFQVKSKQKSDTLMLNS 264
++F +++ G P+ +T +SV +AC G +E L K Y + + + K
Sbjct: 160 ELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKH----FGC 215
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+IDM G+ GR+ A ++ GL E N
Sbjct: 216 IIDMLGRAGRLCEAEQII--------------------EGLPVEV--------------N 241
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ + +L C G+V+ GK +M+ ++ + FA +++ LGR E+AR +
Sbjct: 242 VIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKL 301
Query: 384 VE 385
++
Sbjct: 302 LD 303
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N +I + G ++ A +F ++ NV SWT +I GY L EA+ F +M GI
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGIS 69
Query: 323 PNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ +T + V+ A + G + G+ H + + K + + R + ++DL + G ++ +
Sbjct: 70 PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMS-DARVGN--SLIDLYAKIGSVQNS 126
Query: 381 RAMVEGMPMKANVVIWGCLM 400
+ + M + N+V W ++
Sbjct: 127 LKVFDEMLDRRNLVSWTSII 146
>gi|242081563|ref|XP_002445550.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
gi|241941900|gb|EES15045.1| hypothetical protein SORBIDRAFT_07g021340 [Sorghum bicolor]
Length = 595
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 218/390 (55%), Gaps = 23/390 (5%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
S + F N+I+R+ L P AL M G + +TL I+LK C AL R
Sbjct: 86 SLPSTFQCNSILRV---LSDPSDALRFLRRMRALGRRGNAFTLAILLKPRC---ALAHAR 139
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
QLH+ V G + + ++ Y+ GD + ARK+F E P R +WN +I+ +++
Sbjct: 140 QLHANVVAEGHLRDALLATSLMACYANRGDGDGARKLFGEMPARDAVAWNVLISCCARNR 199
Query: 202 RAKEAIDMFIGLK--KCGFEPDDVTMVSVTSACGSLGDLELALQV------HKYVFQVKS 253
R K+A+ +F ++ G EPDDVT + + AC SLG L+ QV H Y ++K
Sbjct: 200 RTKDALKLFEEMRGRDSGAEPDDVTCILLLQACTSLGALDFGEQVWAYAEEHGYGAKLKV 259
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ NSLI MY +CG +D AY+VF Q +V +W++MI G AANG ++A+ F
Sbjct: 260 R--------NSLIAMYSRCGCVDKAYRVFCGTPQKSVVTWSAMISGLAANGFGDDAISAF 311
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M S + P+ TF GVLSAC H G V EG FF+MM+ Y ++P HYGC+VDL+GR
Sbjct: 312 EEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDLMGR 371
Query: 374 AGLLEEARAMVEG-MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
AGLL+EA +V M + + IW L+GAC G+V +GE V +L EL+ G YV+
Sbjct: 372 AGLLDEAYELVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVISNLIELKAQQAGDYVL 431
Query: 433 LSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
L N YA+ G W +V +R +M+ + + P
Sbjct: 432 LLNTYAAVGEWSKVSEVRKLMQEKGIQTTP 461
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 218/378 (57%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + + KKAL Y+ M V D + L L A L A G+ LH+ +
Sbjct: 245 WTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATIL 304
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
+LG E F + +YSK+GD A VF + + + S AII G + + ++A+
Sbjct: 305 KLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKAL 364
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F+ L++ G EP++ T S+ AC + LE Q+H V VK K D + ++L+D
Sbjct: 365 STFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQV--VKFNFKRDPFVSSTLVD 422
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MYGKCG D + ++F EI+ P+ +W +++ ++ +GL A++ F+ M G++PN VT
Sbjct: 423 MYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVT 482
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV +L C H G V++G ++F M+ +Y + P+ HY C++DLLGRAG L+EA + M
Sbjct: 483 FVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM 542
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + NV W +GAC+ G+++ ++ A L +LEP + GA+V+LSNIYA WE+V+
Sbjct: 543 PFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQ 602
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R ++K N+ K+P YS
Sbjct: 603 SLRKMIKDGNMNKLPGYS 620
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 163/351 (46%), Gaps = 14/351 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC L +++ + + +M+ W +II + ++AL + M G +
Sbjct: 121 SKCGELDYTIKLFDKMSQRNMVS-------WTSIITGFAHNSRFQEALSSFCQMRIEGEI 173
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
+ L VL+A L A++ G Q+H L V+ G F S +YSK G+ A K
Sbjct: 174 ATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKA 233
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+E P + W ++I G ++G K+A+ ++ + D + S SAC +L
Sbjct: 234 FEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKAS 293
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW-EIDQPNVSSWTSMI 297
+H + ++ + +T + N+L DMY K G M A VF D ++ S T++I
Sbjct: 294 SFGKSLHATILKLGFEY--ETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAII 351
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQ 356
GY +AL F +R GI PN TF ++ AC + K++ G +++K ++
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFK 411
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+P + +VD+ G+ GL + + + + + + + W L+G + G
Sbjct: 412 RDPFVS--STLVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG 459
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 2/218 (0%)
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
L D T+ +++ + L G+QLH++ +R G N F + F++LYSK G+ + K
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ +R + SW +II G + + R +EA+ F ++ G + SV AC SLG
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
++ QVH V VK + + ++L DMY KCG + A K F E+ + WTSMI
Sbjct: 192 IQFGTQVHCLV--VKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMI 249
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
G+ NG +AL + M + + LSAC
Sbjct: 250 DGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSAC 287
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+T + N +++Y KCG +D K+F ++ Q N+ SWTS+I G+A N EAL F MR
Sbjct: 109 NTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMR 168
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-------MVDL 370
G VL AC G +Q G ++ +GC + D+
Sbjct: 169 IEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVK--------CGFGCELFVGSNLTDM 220
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ G L +A E MP K + V+W ++ K G+ K
Sbjct: 221 YSKCGELSDACKAFEEMPCK-DAVLWTSMIDGFVKNGDFK 259
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 217/380 (57%), Gaps = 5/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIY---IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
W+ ++ Y + ++AL+++ + + ++ TL V++ L L G LH
Sbjct: 290 WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHC 349
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A++ G + + +S+Y+K G A + F+E R S+ AII+G Q+G ++E
Sbjct: 350 YAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEE 409
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+ MF+ ++ G P+ T+ SV AC L L H Y + +DT++ N+L
Sbjct: 410 GLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYA--IICGFTADTMICNAL 467
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG++D A KVF + + + SW +MI+ Y +G+ EAL F M+ G++P+
Sbjct: 468 IDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDD 527
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+ ++SAC H G V EGK++F M + I PR HY CMVDLL RAGL +E + +E
Sbjct: 528 VTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIE 587
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP++ +V +WG L+ AC + NV++GE V+K +Q+L P S G +V+LSN+Y++ G W++
Sbjct: 588 KMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDD 647
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++R K + K P S
Sbjct: 648 AAQVRFTQKEQGFEKSPGCS 667
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 132/271 (48%), Gaps = 8/271 (2%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
M H WN +IR Y ++A+D+Y M G+ P+ +T P VLKA L
Sbjct: 77 MPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEAS 136
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
GR++H RL LESN + + + Y+K G + A++VFD+ +R + +WN++I+G S
Sbjct: 137 EGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFS 196
Query: 199 -QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+G E + + ++ P+ T+V V A + L ++H F V+
Sbjct: 197 LHEGSYDEVARLLVQMQN-DVSPNSSTIVGVLPAVAQVNSLRHGKEIHG--FCVRRGFVG 253
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFH-- 314
D ++ ++D+YGKC +D A ++F + N +W++M+ Y EAL+ F
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313
Query: 315 -YMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+++ I + VT V+ C + + G
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTG 344
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 5/243 (2%)
Query: 162 FISLYSKAGDFEKARKVFDENPER--KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ LY + + AR VFD+ P R + WN +I + +G +EAID++ + G
Sbjct: 57 LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ T V AC +L + ++H + +++ +S+ + +L+D Y KCG +D A
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLR--LESNVYVSTALVDFYAKCGCLDDAK 174
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF ++ + +V +W SMI G++ + + + + ++ + PN T VGVL A
Sbjct: 175 EVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVN 234
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
++ GK + G ++D+ G+ ++ AR + + M + N V W +
Sbjct: 235 SLRHGKEIHGFCVRRGFVGDVVVGTG-ILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAM 293
Query: 400 MGA 402
+GA
Sbjct: 294 VGA 296
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A + II Y + ++ L +++ M +G+ P+ TL VL A L L G H
Sbjct: 391 AVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHC 450
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A+ G ++ + I +Y+K G + ARKVFD +R + SWN +I G E
Sbjct: 451 YAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLE 510
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
A+ +F ++ G +PDDVT + + SAC G
Sbjct: 511 ALLLFDNMQSEGLKPDDVTFICLISACSHSG 541
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 221/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL ++ M R+ P+ +T VL + + L +G+Q+H L V
Sbjct: 120 WTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIV 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +S+ F S + +Y+KAG E+AR++F+ PER + S AIIAG +Q G +EA++
Sbjct: 180 KWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L+ G P+ VT S+ +A L L+ Q H +V ++ + ++ NSLIDM
Sbjct: 240 MFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHV--LRRELPFYAVLQNSLIDM 297
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVT 327
Y KCG + A ++F + + SW +M+VGY+ +GL E L+ F MR E ++P+ VT
Sbjct: 298 YSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 357
Query: 328 FVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ VLS C HG G ++ M+ Y I+P HYGC+VD+LGRAG ++EA ++
Sbjct: 358 LLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKR 417
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP K + G L+GAC +V +GE+V L E+EP + G YV+LSN+YAS G WE+V
Sbjct: 418 MPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGRWEDV 477
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+RA+M + + K P S
Sbjct: 478 NNVRAMMMQKAVTKEPGRS 496
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 147/298 (49%), Gaps = 28/298 (9%)
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
CY +L A AL G+++H+ ++ + + + Y K E ARKV D
Sbjct: 53 CYD--ALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD 110
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
E PE+ + SW A+I+ SQ G + EA+ +F + + +P++ T +V ++C L L
Sbjct: 111 EMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLAL 170
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
Q+H + VK S + +SL+DMY K G+++ A ++F + + +V S T++I GY
Sbjct: 171 GKQIHGLI--VKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGY 228
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-----------FFE 349
A GL EAL+ F ++ G+RPN+VT+ +L+A + GK F+
Sbjct: 229 AQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 288
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+++N ++D+ + G L A+ + + MP + + W ++ K G
Sbjct: 289 VLQN------------SLIDMYSKCGNLSYAQRLFDNMPER-TAISWNAMLVGYSKHG 333
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 13/248 (5%)
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAI-DMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+ F +P L ++ I + L +GR +EA+ +M + + GF D ++ +AC
Sbjct: 10 RSFSSSPNSVLQTFRPI-SQLCSNGRLQEALLEMVMLGPEIGFHCYD----ALLNACLDK 64
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L +VH ++ +K++ T + L+ YGKC ++ A KV E+ + NV SWT+
Sbjct: 65 RALREGQRVHAHM--IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 122
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI Y+ G ++EAL F M S +PN TF VL++C+ + GK ++ +
Sbjct: 123 MISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVK-W 181
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ ++D+ +AG +EEAR + E +P + V + G + + + E
Sbjct: 182 NYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAG----YAQLGLDEEA 237
Query: 416 AKHLQELE 423
+ Q L+
Sbjct: 238 LEMFQRLQ 245
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 237/443 (53%), Gaps = 50/443 (11%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S+ +L+LNQ + W + I L +R +A + M AGV
Sbjct: 14 SQIQRILKLNQ-----------STSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVE 62
Query: 119 PDCYTLPIVLKASCQLFAL---EIGRQLHSLAVRLGLE-SNEFCESGFISLYSKAGDFEK 174
P+ T I L + C + +G LH A +LGL+ ++ + + +YSK G F K
Sbjct: 63 PNHITF-IALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGK 121
Query: 175 AR-------------------------------KVFDENPERKLGSWNAIIAGLSQDGRA 203
AR K+FDE PER L SW A+I G + G
Sbjct: 122 ARLVFDFMEDKNSVTWNTMIDGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFH 181
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+EA+ F ++ G +PD V +++ +AC LG L L VH+YV + K++ + N
Sbjct: 182 EEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYV--MNQDFKNNIRVSN 239
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SLID+Y +CG ++ A +VF ++++ V SW S+IVG+AANG A+E+L F M+E G +P
Sbjct: 240 SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKP 299
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ VTF G L+AC H G V+EG +F+ MK ++I PR HYGC+VDL RAG LE+A +
Sbjct: 300 DAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNV 359
Query: 384 VEGMPMKANVVIWGCLMGACEKFG-NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
V+ MPMK N V+ G L+ AC G N + E + KHL +L S YV+LSN+YA+ G+
Sbjct: 360 VQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGI 419
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WE ++R MK L K P +S
Sbjct: 420 WEGASKMRRKMKGLGLKKQPGFS 442
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 227/412 (55%), Gaps = 41/412 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK--ASCQLFALEIGRQLHSL 146
W + I L +R +A + M AGV P+ TL +L A C+ F G LH
Sbjct: 32 WTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPF----GDSLHGY 87
Query: 147 AVRLGLESNE-FCESGFISLYSKAGDFEKAR----------------------------- 176
A +LGL+ N+ + + +YSK F KAR
Sbjct: 88 ACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDD 147
Query: 177 --KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
KVFDE PER L SW A+I G + G +EA+ F ++ G +PD V +++ +AC +
Sbjct: 148 AAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAACAN 207
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG L L VH++V V K++ + NSLID+Y +CG ++ A +VF E+++ V SW
Sbjct: 208 LGALSFGLWVHRFV--VSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRTVVSWN 265
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
S+IVG+AANG A+E+L F M+E +P+ VTF G L+AC H G V+EG +FE MK
Sbjct: 266 SVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRD 325
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN-VKMGE 413
Y+I PR HYGC+VDL RAG LEEA +VE MPMK N V+ G L+ AC GN ++ E
Sbjct: 326 YRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGNDTELAE 385
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ K L EL+ YV+LSN+YA+ G WE ++R MK L K P +S
Sbjct: 386 RMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQPGFS 437
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 34/242 (14%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS-------------- 234
SW + I LS++GR EA F ++ G EP+ +T++++ S C
Sbjct: 31 SWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFGDSLHGYACK 90
Query: 235 LGDLELALQVHKYVFQVKSKQK--------------SDTLMLNSLIDMYGKCGRMDLAYK 280
LG + V + + SK++ +++ N++ID Y + GR+D A K
Sbjct: 91 LGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAK 150
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
VF E+ + ++ SWT+MI G+ GL EAL F M+ SG++P++V + L+AC + G
Sbjct: 151 VFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALAACANLGA 210
Query: 341 VQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
+ G H F + ++ ++ R ++ ++DL R G +E AR + + M K VV W
Sbjct: 211 LSFGLWVHRFVVSQD-FKNNVRVSN--SLIDLYCRCGCVEFARQVFDEME-KRTVVSWNS 266
Query: 399 LM 400
++
Sbjct: 267 VI 268
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 30/145 (20%)
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC---------VHGGKVQ 342
SWTS I + NG EA F MR +G+ PNH+T + +LS C +HG +
Sbjct: 31 SWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFGDSLHGYACK 90
Query: 343 EGKHFFEMMK-----NVYQIEPRF---------------AHYGCMVDLLGRAGLLEEARA 382
G ++M +Y RF + M+D R+G +++A
Sbjct: 91 LGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDDAAK 150
Query: 383 MVEGMPMKANVVIWGCLMGACEKFG 407
+ + MP + +++ W ++ K G
Sbjct: 151 VFDEMPER-DLISWTAMINGFVKKG 174
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 253/479 (52%), Gaps = 26/479 (5%)
Query: 4 LVPGISLSSLRMK---SSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
L+P S S L HPLL L + T R + AA+ PA V L+
Sbjct: 14 LLPAKSKSPLAAAPAAQQHPLLPYLPQCTTLRALAQLHAAAVKSGLQAHPA-FVTRLLTL 72
Query: 61 CTNL-----LQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAP-------KKALDI 108
CT+ QL+ YA + + + +N ++R Y R A ++A +
Sbjct: 73 CTDQGAAKPAQLS--YARQVFDRIPGPGDVVW-YNTLLRGYARCSAAGGARPPAEEAARV 129
Query: 109 YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
++ M GV PD YT +LKA A E GRQ H +AV++G +E+ I++Y++
Sbjct: 130 FVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAE 189
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
GD AR +F + S+NA+I + R EA+ +F ++ G + VT++SV
Sbjct: 190 CGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISV 249
Query: 229 TSACGSLGDLELALQVHKYV--FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SAC LG LEL +H+YV Q+ S K +T +LIDMYGKCG ++ A VF ++
Sbjct: 250 LSACALLGALELGRWIHEYVRKVQLDSLVKVNT----ALIDMYGKCGSLEDAISVFQGME 305
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ +W+ MIV YA + EA+ F M++ GI+P+ VTF+GVL AC H G V EG
Sbjct: 306 SRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQ 365
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+F+ M+ + + P HYGC+ DLL R+G L+ A ++ +P+K ++W L+ AC
Sbjct: 366 YFDSMRE-FGLVPGIKHYGCVADLLARSGQLDRAYEFIDELPIKPTAILWRTLLSACGSR 424
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+ +G+ V + + EL+ G YV+ SN+ A+ G WEE+ R+R +M + + K+P S
Sbjct: 425 GDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEMNRVRKLMNEKGVVKVPGCS 483
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 247/473 (52%), Gaps = 67/473 (14%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHM-LHSYSA-----------------------------AF 87
L C ++ Q+ Q +AH+I T + LH +A F
Sbjct: 22 LESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKPDVF 81
Query: 88 HWNNIIRLYTRL-EAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+N +I+ + + + ++ I++ M R +G LP+ YT V KA + G Q+
Sbjct: 82 IYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRV 141
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD------------------------- 180
A+++GLESN F + I +Y+ G ++AR+VFD
Sbjct: 142 HAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGR 201
Query: 181 ------ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
E ER + SW IIAG Q G KEA+D+F + + G P++ T+ S +AC +
Sbjct: 202 AKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACAN 261
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID--QPNVSS 292
L L+ +H Y+ KS+ K + +L SL+DMY KCG +D A KVF + + V
Sbjct: 262 LVALDQGRWIHVYI--DKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWP 319
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI GYA +G + EA+D F M+ + PN VTFV +L+AC HG V+EG+ +F+ M
Sbjct: 320 WNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMA 379
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ Y IEP HYGCMVDLLGR+GLL+EA V MPM + IWG L+GAC +++ G
Sbjct: 380 SSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERG 439
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + K ++EL+ G +V+L+N+Y++ G W+E + +R ++ K P S
Sbjct: 440 QRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCS 492
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 212/385 (55%), Gaps = 10/385 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P +AL ++ MS V P+ T+ L A ++ GR +H
Sbjct: 173 WTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIR 232
Query: 149 RLGLE-------SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+ G + SN + + +Y+K G + AR +F++ P+R + SWN++I +Q
Sbjct: 233 KAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYE 292
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
R +EA+D+F + G PD T +SV S C L L VH Y+ +K+ +D +
Sbjct: 293 RHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYL--LKTGIATDISL 350
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SG 320
+L+DMY K G + A K+F + + +V WTSMI G A +G NEAL F M+E S
Sbjct: 351 ATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSS 410
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+H+T++GVL AC H G V+E K F +M +Y + P HYGCMVDLL RAG EA
Sbjct: 411 LVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREA 470
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
++E M ++ N+ IWG L+ C+ NV + V L+ELEP G +++LSNIYA
Sbjct: 471 ERLMETMTVQPNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKA 530
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G WEEV R VMKH+ + K +S
Sbjct: 531 GRWEEVNVTRKVMKHKRITKTIGHS 555
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 166/329 (50%), Gaps = 7/329 (2%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ + WN++IR + P+ ++ +Y M G PD +T P VLKA C + + G+ +H
Sbjct: 68 SVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIH 127
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
S V+ G E++ + +G + +Y D + KVFD P+ + +W +IAG ++ +
Sbjct: 128 SCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPY 187
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV-----KSKQKSDT 259
EA+ +F + EP+++TMV+ AC D++ VH+ + + S S+
Sbjct: 188 EALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNI 247
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++ ++++MY KCGR+ +A +F ++ Q N+ SW SMI Y EALD F M S
Sbjct: 248 ILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTS 307
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ TF+ VLS C H + G+ + I + ++D+ + G L
Sbjct: 308 GVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKT-GIATDISLATALLDMYAKTGELGN 366
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGN 408
A+ + + K +VV+W ++ G+
Sbjct: 367 AQKIFSSL-QKKDVVMWTSMINGLAMHGH 394
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 24/275 (8%)
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
S+ GD A V + + WN++I G + ++ ++ + + G+ PD T
Sbjct: 49 SEFGDINYADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFP 108
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V AC + D + +H + VKS ++D L+ MY C M KVF I
Sbjct: 109 FVLKACCVIADQDCGKCIHSCI--VKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIP 166
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ NV +WT +I GY N EAL F M + PN +T V L AC H + G+
Sbjct: 167 KWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRW 226
Query: 347 FFEMMKNVYQIEPRFAHYG-------CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ ++ +P + ++++ + G L+ AR + MP + N+V W +
Sbjct: 227 VHQRIRKA-GYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQR-NIVSWNSM 284
Query: 400 MGACEKFGNVKMGEWVAKHLQEL----EPWSDGAY 430
+ A ++ +H + L + W+ G Y
Sbjct: 285 INAYNQY---------ERHQEALDLFFDMWTSGVY 310
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 31/192 (16%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID--MYGKCGRMDLAYKV 281
T++S+ + C S+ +L+ ++H + V + + L+ LID + + G ++ A V
Sbjct: 6 TILSLLAKCKSMRELK---KLHGLI--VTTPTIKSIIPLSKLIDFCVDSEFGDINYADLV 60
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA------- 334
+I P+V W SMI G+ + ++ + M E+G P+H TF VL A
Sbjct: 61 LRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQ 120
Query: 335 ----CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
C+H V+ G FE + Y Y D+ ++GL + + +P K
Sbjct: 121 DCGKCIHSCIVKSG---FE--ADAYTATGLLHMYVSCADM--KSGL-----KVFDNIP-K 167
Query: 391 ANVVIWGCLMGA 402
NVV W CL+
Sbjct: 168 WNVVAWTCLIAG 179
>gi|356542056|ref|XP_003539487.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 595
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 212/393 (53%), Gaps = 29/393 (7%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIF---MSRAGVLPDCYTLPIVLKA---SCQLFALEIG 140
F +N +IR P + I IF SR + D YT VL A S L +G
Sbjct: 194 FLFNTLIRCV----QPNDS--ILIFRNEFSRGLMFFDEYTYNFVLGACARSPSASTLWVG 247
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS-- 198
RQLH+L V+ G+ESN + + Y+ D +RKVFDE P R +WNA+I G S
Sbjct: 248 RQLHALIVKHGVESNIVVPTTKVYFYASNKDIISSRKVFDEMPRRSTVTWNAMITGYSSL 307
Query: 199 QDGRAKEA-------IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
++G K A IDM I + G +P T+VSV SA +G LE +H + +
Sbjct: 308 KEGNKKYALNALYLFIDMLIDVS--GIKPTATTIVSVLSAVSQIGMLETGACIHGFAEKT 365
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
+ D + L+DMY KCG +D A VFW ++Q N+ +WT+M G A +G ++L+
Sbjct: 366 VCTPEDDVFIGTGLVDMYSKCGCLDSALSVFWRMNQKNIMTWTAMTTGLAIHGKGKQSLE 425
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
+ M G++PN TF LSAC HGG V+EG F MK + + P+ HYGC+VDLL
Sbjct: 426 VLYKMGAYGVKPNEATFTSFLSACCHGGLVEEGLQLFLEMKRTFGVMPQIQHYGCIVDLL 485
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA-- 429
GRAG LEEA + MP+ + VIW L+ AC G+V MGE V K L +LE WS
Sbjct: 486 GRAGKLEEAYDFIMQMPINPDAVIWRSLLAACNIHGDVVMGEKVGKFLLQLEEWSSAESP 545
Query: 430 ----YVVLSNIYASRGLWEEVERIRAVMKHRNL 458
Y+ LSN+YA W++VE +R MK +++
Sbjct: 546 KSEDYIALSNVYALAEKWDDVETVRIKMKAKSI 578
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 243/455 (53%), Gaps = 24/455 (5%)
Query: 26 CKTHTFRKHVTISAASSFLDTHED---------------PAKIVATQLSKCTNLLQLNQI 70
C T+TF + A S L+ + A +AT +KC L ++
Sbjct: 167 CDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRL 226
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
+ + + ++ W II ++ + A+ + M V P+ +T V+
Sbjct: 227 FESMTQRDVVS-------WTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISG 279
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
L +E G QLH+ +R GL + + +++YSK + A VF R + SW
Sbjct: 280 CATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISW 339
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+ +I+G +Q G +EA D +++ G P++ SV S CG++ LE Q+H +V
Sbjct: 340 STMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLC 399
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
V +Q +T++ ++LI+MY KCG + A K+F E + N+ SWT+MI GYA +G + EA+
Sbjct: 400 VGLEQ--NTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAI 457
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
D F + + G+RP+ VTF+ VL+AC H G V G H+F + V+QI P HYGCM+DL
Sbjct: 458 DLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDL 517
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
L RAG L +A +M++ MP + + V+W L+ AC G+V G+ A+ + +L+P +
Sbjct: 518 LCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTH 577
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L+N+YA++G W+E +R +MK + + K P +S
Sbjct: 578 ITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWS 612
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II R K+AL + M V D YT LKA AL GR++H +
Sbjct: 137 WTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTL 196
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + F + ++Y+K G + ++F+ +R + SW II Q G+ + A+
Sbjct: 197 KKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVK 256
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLID 267
F +++ P++ T +V S C +LG +E Q+H +V + + D+L + NS++
Sbjct: 257 AFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIR---RGLVDSLSVANSIMA 313
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC ++DLA VF + + ++ SW++MI GYA G EA D +MR G RPN
Sbjct: 314 MYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFA 373
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F VLS C + +++GK + V +E ++++ + G ++EA + +
Sbjct: 374 FASVLSVCGNMAILEQGKQLHAHVLCV-GLEQNTMVQSALINMYSKCGSIKEASKIFDEA 432
Query: 388 PMKANVVIWGCLMGACEKFG 407
N+V W ++ + G
Sbjct: 433 EYN-NIVSWTAMINGYAEHG 451
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 20/296 (6%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFM-SRA 115
++N + ++++T L++ F W II Y +AL ++ M
Sbjct: 3 EINLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEP 62
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G+ D + L + LKA ++ G LH +V+ ++ F S + +Y K G ++
Sbjct: 63 GLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEG 122
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAI----DMFIGLKKCGFEPDDVTMVSVTSA 231
VF E P R + SW AIIAGL + G KEA+ DM+I C D T S A
Sbjct: 123 CIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGC----DTYTFSSALKA 178
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C G L ++H +K + + + N+L MY KCG++D ++F + Q +V
Sbjct: 179 CADSGALNYGREIHCQT--LKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVV 236
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
SWT++I+ G A+ F MRE+ + PN TF V+S C G+++ G+
Sbjct: 237 SWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQL 292
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 195/313 (62%), Gaps = 2/313 (0%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N + I+ Y K G +KA+ +FD+ P R L SWNA+I G +Q+G +EA+ +
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ K G +PD T++SV +AC SL L+ + H V +KS +S + N+LI MY KC
Sbjct: 290 MLKMGMQPDHSTLISVLTACSSLASLQEGRKTH--VLVLKSGYESRISICNALITMYCKC 347
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + + F +ID P+V SW +MI +A +G + AL F MR + + P+ +TF+ +L
Sbjct: 348 GSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLL 407
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC H GKV E ++F M Y+I PR H+ C+VD+L R G +E+A +++ MP +A+
Sbjct: 408 SACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEAD 467
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
IWG L+ AC NVK+GE AK + ELEP + GAYVVLSNIYA+ G+W EV R+R +
Sbjct: 468 CGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGL 527
Query: 453 MKHRNLAKIPAYS 465
M+ + + K PAYS
Sbjct: 528 MREQGVKKQPAYS 540
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + ++AL ++ M + G+ PD TL VL A L +L+ GR+ H L +
Sbjct: 267 WNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVL 326
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES + I++Y K G + F + + SWNA+IA ++ G A+
Sbjct: 327 KSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALA 386
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM-----LN 263
F ++ EPD +T +S+ SACG G +VH+ + S +S ++
Sbjct: 387 SFGEMRSNRVEPDGITFLSLLSACGHAG------KVHESLNWFNSMIESYKIVPRPEHFA 440
Query: 264 SLIDMYGKCGRMDLAYKVFWEI 285
L+D+ + G+++ AYK+ E+
Sbjct: 441 CLVDILSRGGQVEKAYKIIQEM 462
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 140/299 (46%), Gaps = 35/299 (11%)
Query: 121 CYTLPIVLKASCQLFAL-------EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
C++ P L S + RQ H L+++L + + + I ++AG+
Sbjct: 5 CFSPPCFLPRSPSIIRTIFLPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIG 64
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP--DDVTMVSVTSA 231
AR++FDE P R SWN+II G ++G E+ +F G P + V+ S+ +
Sbjct: 65 AARQLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLF------GLMPTKNVVSWNSMIAG 118
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C ++ A Q FQ ++ +T N++I + R++ A ++F E+ + NV
Sbjct: 119 CIEDERIDEAWQ----YFQAMPQR--NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVI 172
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
S+T+M+ GYA G +A F+ M + N V++ ++S V GK E ++ FE M
Sbjct: 173 SYTAMVDGYAKIGEIEQARALFNCMPQK----NVVSWTVMISGYVENGKFDEAENLFEQM 228
Query: 352 --KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
KN+ + Y C + G ++A+ + + +P + ++ W ++ + G+
Sbjct: 229 PDKNIVAMTAMITGY-C------KEGKTDKAKILFDQIPCR-DLASWNAMITGYAQNGS 279
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT+ NS+I Y K G D + ++F + NV SW SMI G + +EA F M
Sbjct: 77 DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 136
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVY-------------QIEPRFA 362
+ N ++ ++S V +V+E FE M +NV +IE A
Sbjct: 137 QR----NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 192
Query: 363 HYGCM---------VDLLG--RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ CM V + G G +EA + E MP K V + + G C++ K
Sbjct: 193 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK- 251
Query: 412 GEWVAKHLQELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVM 453
AK L + P D ++ + YA G EE ++ + M
Sbjct: 252 ----AKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290
>gi|224082530|ref|XP_002306730.1| predicted protein [Populus trichocarpa]
gi|222856179|gb|EEE93726.1| predicted protein [Populus trichocarpa]
Length = 578
Score = 265 bits (676), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 223/378 (58%), Gaps = 4/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN IIR + + P A Y M D T VLKA ++ A Q+H+ V
Sbjct: 73 WNAIIRGFIQSPNPTNAFAWYKSMISKSRKVDALTCSFVLKACARVLARLESIQIHTHIV 132
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G ++ + + +Y+K G+ + A KVFDE +R + SWNA+I+G +Q + EA+
Sbjct: 133 RKGFIADALLGTTLLDVYAKVGEIDSAEKVFDEMVKRDIASWNALISGFAQGSKPTEALS 192
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ GF+P++++++ SAC LGD + ++H Y+ +V+ + + + N +IDM
Sbjct: 193 LFKRMEIDGFKPNEISVLGALSACAQLGDFKEGEKIHGYI-KVE-RFDMNAQVCNVVIDM 250
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG +D AY VF + + ++ +W +MI+ +A +G +AL+ F M +SG+ P+ V+
Sbjct: 251 YAKCGFVDKAYLVFESMSCRKDIVTWNTMIMAFAMHGEGCKALELFEKMDQSGVSPDDVS 310
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
++ VL AC HGG V+EG F M+N ++P HYG +VDLLGRAG L EA +V M
Sbjct: 311 YLAVLCACNHGGLVEEGFRLFNSMENC-GVKPNVKHYGSVVDLLGRAGRLHEAYDIVNSM 369
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P ++V+W L+GA NV++ E V++ L E+ G +V+LSN+YA+R W +V
Sbjct: 370 PTVPDIVLWQTLLGASRTHRNVEIAETVSRKLVEMGSNHCGDFVLLSNVYAARERWADVG 429
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R MK+R++ K+P S
Sbjct: 430 RVREAMKNRDVKKVPGLS 447
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 220/409 (53%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + +A+ IY M V P+ T+ ++ + Q+ L +G++ H
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
GLE + + +Y K G+ AR +FD
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ PE+ + WNAII+G Q + KEA+ +F ++ EPD VTMV+ SAC LG
Sbjct: 347 ILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGA 406
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L++ + +H Y+ + K D + +L+DMY KCG + A +VF EI Q N +WT++I
Sbjct: 407 LDVGIWIHHYI--ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVI 464
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G A +AL F M GI P+ +TF+GVLSAC HGG V+EG+ +F M + + +
Sbjct: 465 CGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNV 524
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HY CMVDLLGRAG LEEA +V+ MPM A+ + G L AC +GNV++GE A
Sbjct: 525 SPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAF 584
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L E++P G YV+L+++Y+ +W+E R +M + + K P SL
Sbjct: 585 KLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSL 633
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 196/456 (42%), Gaps = 79/456 (17%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHML 80
+ H K + + SF+ E+P + + L +C +L+QL QI A ++ T ++
Sbjct: 32 IFHNSSSLSPITKTINWNTTHSFV--RENP---LLSILERCKSLVQLKQIQAQMVSTGLI 86
Query: 81 HSYSAA------------------------------FHWNNIIRLYTRLEAPKKALDIYI 110
+ AA F WN IR Y + +Y
Sbjct: 87 ENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYK 146
Query: 111 FMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M G L PD +T P++LK C ++ +G + ++ G E + F + I++
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G+ A VF+++ R L +WN++I G + G A EAI ++ ++ P+++TM+ +
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMI 266
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQP 288
S+C + DL L + H Y +K T+ L N+L+DMY KCG + A +F + Q
Sbjct: 267 SSCSQVQDLNLGKEFHCY---IKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 289 NVSSWTSMIVGYAANGLAN-------------------------------EALDCFHYMR 317
+ SWT+M++GYA G + EAL FH M+
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQ 383
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
I P+ VT V LSAC G + G H+ E +++ A +VD+ +
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIER----HKLSIDVALGTALVDMYAKC 439
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G + A + E +P + N + W ++ GN +
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/377 (37%), Positives = 214/377 (56%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P +A+ + M RA P+ +T +LKA+ IG Q+H+LAV
Sbjct: 26 WTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAV 85
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + + S + +Y++ + A VFD + SWNA+IAG ++ + +
Sbjct: 86 KYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLM 145
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF T S+ SA +G LE VH ++ +KS QK + N+++ M
Sbjct: 146 KFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHL--IKSGQKLTAFVGNTMLGM 203
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G M A KVF +D+ ++ +W +M+ A GL EA+ F +R+ GI+ N +TF
Sbjct: 204 YAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITF 263
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V+EGKH+F+MMK+ Y ++P HY VDLLGRAGLL+EA V MP
Sbjct: 264 LSVLTACSHGGLVKEGKHYFDMMKD-YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMP 322
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ +WG L+GAC N KMG++ A H+ EL+P G V+L NIYAS G W + R
Sbjct: 323 MEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYASTGKWNDAAR 382
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 383 VRKMMKATGVKKEPACS 399
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 7/258 (2%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y K G AR VFD+ P R + SW +IAG +Q+ EAI + + + F P+ T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
S+ A G+ G + Q+H VK D + ++L+DMY +C +MD+A VF
Sbjct: 61 FTSLLKATGACGGCSIGEQMH--ALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDR 118
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ N SW ++I G+A L F M+ +G H T+ + SA G +++G
Sbjct: 119 LVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQG 178
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ + Q F M+ + ++G + +AR + + M K ++V W ++ A
Sbjct: 179 RWVHAHLIKSGQKLTAFVG-NTMLGMYAKSGSMVDARKVFDRMD-KRDLVTWNTMLTALA 236
Query: 405 KFGNVKMGEWVAKHLQEL 422
++G +G+ H +E+
Sbjct: 237 QYG---LGKEAVAHFEEI 251
>gi|115440653|ref|NP_001044606.1| Os01g0814300 [Oryza sativa Japonica Group]
gi|20161481|dbj|BAB90405.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|56785052|dbj|BAD82691.1| PPR repeat containing protein-like [Oryza sativa Japonica Group]
gi|113534137|dbj|BAF06520.1| Os01g0814300 [Oryza sativa Japonica Group]
Length = 604
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/378 (40%), Positives = 220/378 (58%), Gaps = 8/378 (2%)
Query: 86 AFHWNNIIRLYTRLEAPKKALD---IYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGR 141
AF +N++IR + A D +Y M RAG LP+ +TL LKA + AL GR
Sbjct: 92 AFCYNSLIRALSSAAGAAPAADTVLVYRRMLRAGSPLPNSFTLAFALKACSVVPALGEGR 151
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-PERKLGSWNAIIAGLSQD 200
QLHS A R GLE + + ++G ++LY+K + AR VFD ++ L +W+A+I G S+
Sbjct: 152 QLHSQAFRRGLEPSPYVQTGLLNLYAKCEEVALARTVFDGMVGDKNLAAWSAMIGGYSRV 211
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G EA+ +F ++ PD+VTMVSV SAC G L+L VH ++ + D
Sbjct: 212 GMVNEALGLFREMQAADVNPDEVTMVSVISACAKAGALDLGRWVHAFID--RKGITVDLE 269
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +LIDMY KCG ++ A VF + + + +W++MIVG A +GL AL F M E
Sbjct: 270 LSTALIDMYAKCGLIERAKGVFDAMAERDTKAWSAMIVGLAIHGLVEVALKLFSRMLELK 329
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+RPN+VTF+GVLSAC H G V EG+ ++ M+ + I+P +YGCMVDL R+ LL+EA
Sbjct: 330 VRPNNVTFIGVLSACAHSGLVNEGRRYWSTMQEL-GIKPSMENYGCMVDLFCRSSLLDEA 388
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ V GM + N VIW L+ A + + + +K L ELEP + YV+LSN+YAS
Sbjct: 389 YSFVTGMAIPPNSVIWRTLLVASKNSNRFDIVQSASKKLLELEPCNPENYVLLSNLYASN 448
Query: 441 GLWEEVERIRAVMKHRNL 458
W+ V +R MK N+
Sbjct: 449 SQWDRVSYMRKKMKENNV 466
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 227/447 (50%), Gaps = 73/447 (16%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLHS 145
F +N +IR + + P AL +++ M R V LPD ++ +LKA+ AL G QLH
Sbjct: 71 FMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHC 130
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE------------------------ 181
LAV GL+S+ F + IS+Y++ ARKVFDE
Sbjct: 131 LAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKD 190
Query: 182 -------NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--------------------- 213
P R L SWN ++AG ++ G + A ++F+ +
Sbjct: 191 AEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNF 250
Query: 214 ----------KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML- 262
++ G P++V++ V SAC G E +H +V +KS L +
Sbjct: 251 NDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFV------EKSGFLQII 304
Query: 263 ---NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
N+LID Y KCG +D+A VF + + + SWT+MI G A +G EA+ F+ M ES
Sbjct: 305 SVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEES 364
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
I+P+ +TF+ +L AC H G V G +F M N Y IEP HYGCMVDL GRAG L++
Sbjct: 365 NIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQ 424
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A V MP+ N ++W L+GAC GN+ + V + L EL+P + G +V+LSNIYA
Sbjct: 425 AYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVLLSNIYAV 484
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
G W++V +R M H+ L K P +S+
Sbjct: 485 AGKWKDVAALRRSMTHQRLKKTPGWSM 511
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 118/314 (37%), Gaps = 74/314 (23%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACG 233
AR++F + + +N +I GLS A+ +F+ +++ PD + + A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV--- 290
+ L LQ+H V S + +LI MY +C + A KVF E+ +PN+
Sbjct: 118 NCRALTNGLQLH--CLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAW 175
Query: 291 ----------------------------SSWTSMIVGYAANG---LANEAL--------- 310
+SW M+ GY G LA E
Sbjct: 176 NAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDV 235
Query: 311 ----------------DCFHYMRE---SGIRPNHVTFVGVLSACVHGGKVQEGK--HFFE 349
D F + RE G+RPN V+ GVLSAC G + G+ H F
Sbjct: 236 SWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFV 295
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
QI + ++D + G L+ AR + + M ++ + V W ++ G
Sbjct: 296 EKSGFLQI---ISVNNALIDTYSKCGNLDMARLVFDNM-LRRSAVSWTAMIAGMAMHG-- 349
Query: 410 KMGEWVAKHLQELE 423
GE + E+E
Sbjct: 350 -YGEEAIRLFNEME 362
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR-PNHVTFVGVLSACV 336
A ++F +I P+V + ++I G + + + AL F MR + P+ +F +L A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
+ + G + Y ++ ++ + L AR + + M ++ N+V W
Sbjct: 118 NCRALTNGLQL-HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-IEPNIVAW 175
Query: 397 GCLMGACEKFGNVKMGEWVAK--HLQELEPWS 426
++ AC + VK E V + ++ L W+
Sbjct: 176 NAIVAACFRCEGVKDAEQVFRCMPIRNLTSWN 207
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 157/413 (38%), Positives = 230/413 (55%), Gaps = 6/413 (1%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P ++AT+L +L + H R F WN +IR Y R + A+ +Y
Sbjct: 95 PDTVLATKL---VDLYAACGLVGHARRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLY 151
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M GV PD +T P+ LKA L LE GR++H + + F +G + +Y+K
Sbjct: 152 RGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKC 211
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G + AR VFD R WN++IA Q+GR EA+ + + G P T+VS
Sbjct: 212 GCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANGVGPTIATLVSTI 271
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
SA L ++H + ++ + + D L SL+DMY K G + +A +F ++ +
Sbjct: 272 SAAADAAALPRGRELHGFGWR-RGFDRQDKLK-TSLVDMYAKSGWVQVARVLFEQLMKRE 329
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+ SW +MI GY +G +EAL F+ MR E+ + P+++TFVGVLSAC HGG V+E K FF
Sbjct: 330 LVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF 389
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+M +VY I+P H+ C+VD+LG AG EEA +++GMPM+ + IWG L+ C+ N
Sbjct: 390 GLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKN 449
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
V++GE + L ELEP G YV+LSNIYA G WE+ R+R +M +R L KI
Sbjct: 450 VELGELALQKLIELEPEDAGNYVLLSNIYAQSGKWEKAARVRKLMTNRGLKKI 502
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 8/276 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL++ +L GRQLH + GL + + + LY+ G AR++FD P+R
Sbjct: 68 VLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRN 127
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +I ++DG + AI ++ G+ G EPD+ T AC +L DLE +VH+
Sbjct: 128 VFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHE 187
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V + + D + L+DMY KCG +D A VF I + W SMI Y NG
Sbjct: 188 RV--LGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRP 245
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHY 364
EAL M +G+ P T V +SA + G+ H F + + +
Sbjct: 246 MEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT-- 303
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ ++G ++ AR + E + MK +V W ++
Sbjct: 304 -SLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMI 337
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 212/372 (56%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +IR Y + A ++ M G+ PD T ++ A L + R++HS V
Sbjct: 332 WTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVV 391
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G ++ ++ + +Y+K G + AR+VFD R + SW+A+I ++G +EA +
Sbjct: 392 RAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFE 451
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +K+ EPD VT +++ +ACG LG L+L +++ Y +K+ S + N+LI+M
Sbjct: 452 TFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEI--YTQAIKADLVSHIPVGNALINM 509
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
K G ++ A +F + Q +V +W MI GY+ +G A EALD F M + RPN VTF
Sbjct: 510 NVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTF 569
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC G V+EG+ FF + + I P YGCMVDLLGRAG L+EA ++ MP
Sbjct: 570 VGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMP 629
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K N IW L+ AC +GN+ + E A+ EP+ YV LS++YA+ G+WE V +
Sbjct: 630 LKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAK 689
Query: 449 IRAVMKHRNLAK 460
+R VM+ R + K
Sbjct: 690 VRKVMESRGVRK 701
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 170/353 (48%), Gaps = 29/353 (8%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S C N+L+ Q + + WN II Y +L K+A ++ M +
Sbjct: 107 SICGNMLEARQTFDSV-------ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P T IVL A L++G++ H+ +++G S+ + +S+Y K G + AR+V
Sbjct: 160 PSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQV 219
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD +R + ++N +I G ++ G ++A +F +++ GF+P+ ++ +S+ C + L
Sbjct: 220 FDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEAL 279
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
VH + + D + +LI MY CG ++ A +VF ++ +V SWT MI
Sbjct: 280 AWGKAVHAQC--MNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIR 337
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA N +A F M+E GI+P+ +T++ +++AC + + +I
Sbjct: 338 GYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAR----------EIH 387
Query: 359 PRFAHYGCMVDLL---------GRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G DLL + G +++AR + + M + +VV W ++GA
Sbjct: 388 SQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRR-DVVSWSAMIGA 439
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 143/284 (50%), Gaps = 6/284 (2%)
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+G+Q+ ++ G + N + + I L+S G+ +AR+ FD + + +WNAIIAG +
Sbjct: 79 LGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYA 138
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q G KEA +F + EP +T + V AC S L+L + H V +V SD
Sbjct: 139 QLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGF--VSD 196
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ +L+ MY K G MD A +VF + + +VS++ MI GYA +G +A F+ M++
Sbjct: 197 FRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQ 256
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP-RFAHYGCMVDLLGRAGLL 377
G +PN ++F+ +L C + GK N ++ R A ++ + G +
Sbjct: 257 EGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT--ALIRMYMGCGSI 314
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
E AR + + M ++ +VV W ++ + N++ + +QE
Sbjct: 315 EGARRVFDKMKVR-DVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 218/410 (53%), Gaps = 33/410 (8%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
S+ WN +I Y R +A ++ M + V+PD L ++ A + + R
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 142 QLHSLAVRLGLE-------------------------------SNEFCESGFISLYSKAG 170
++ + + N F + +S YSK G
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ A+ +FD+ ++ L W +I+ + +EA+ +F + G +PD V+M SV S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC +LG L+ A VH + + +S+ + N+LI+MY KCG +D VF ++ + NV
Sbjct: 353 ACANLGILDKAKWVHSCIHV--NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW+SMI + +G A++AL F M++ + PN VTFVGVL C H G V+EGK F
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M + Y I P+ HYGCMVDL GRA LL EA ++E MP+ +NVVIWG LM AC G ++
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+G++ AK + ELEP DGA V++SNIYA WE+V IR VM+ +N+ K
Sbjct: 531 LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFK 580
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 211/465 (45%), Gaps = 67/465 (14%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRT---HMLHSY------------------------ 83
A + +LS C +L + Q++AHI+RT H L+S+
Sbjct: 12 ANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIP 71
Query: 84 --SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+ +N +R +R P+ + Y + G D ++ +LKA ++ AL G
Sbjct: 72 SPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+LH +A ++ + F E+GF+ +Y+ G AR VFDE R + +WN +I + G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EA +F +K PD++ + ++ SACG G++ + Y F +++ + DT +
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI--YEFLIENDVRMDTHL 249
Query: 262 LNSLIDMYG-------------------------------KCGRMDLAYKVFWEIDQPNV 290
L +L+ MY KCGR+D A +F + ++ ++
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
WT+MI Y + EAL F M SGI+P+ V+ V+SAC + G + + K
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ +V +E + ++++ + G L+ R + E MP + NVV W ++ A G
Sbjct: 370 I-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEAS 427
Query: 411 MG-EWVAKHLQE-LEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
A+ QE +EP ++ +V + + GL EE ++I A M
Sbjct: 428 DALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASM 471
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 223/408 (54%), Gaps = 34/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N I+ Y R ++AL I M + G PD T+ + AS QL L G+ H +
Sbjct: 301 YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVI 360
Query: 149 RLGLESNEFCESGFISLYSKAG-------------------------------DFEKARK 177
R GLE + + I +Y K G D E A +
Sbjct: 361 RNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWE 420
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VF++ PER WN +I+GL Q ++AI++F ++ G + D VTM+ + SACG LG
Sbjct: 421 VFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGA 480
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
ELA VH Y+ K+ D + +L+DM+ +CG A +VF ++ + +VS+WT+ I
Sbjct: 481 PELAKWVHTYI--EKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAI 538
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A G A F+ M G++P+ V FV VL+AC HGG+V++G H F +M++ + I
Sbjct: 539 GTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGI 597
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HYGCMVDLLGRAGLL EA +++ MPM+ N V+WG L+ AC NV+M + A+
Sbjct: 598 SPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAE 657
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL P G +V+LSNIYAS G W +V R+R ++ + + K+P S
Sbjct: 658 RINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSS 705
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 178/353 (50%), Gaps = 26/353 (7%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+ S A F N++IR Y+ ++A+ +Y+ M GV P+ YT P VL ++ A
Sbjct: 90 VRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCE 149
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G Q+H V++GLE + F ++ I Y++ G + KVF+ ER + SW ++I G ++
Sbjct: 150 GIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYAR 209
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
R KEA+ +F + + G P VTMV V SAC L DL++ +V Y+ ++ K +
Sbjct: 210 GDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGEL--GLKLNK 267
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+M+N+L+DMY KCG +D A ++F E N+ + +++ YA GLA EAL M +
Sbjct: 268 VMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQ 327
Query: 320 GIRPNHVTFVGVLSACV-----------HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
G RP+ VT + +SA HG ++ G ++ + NV ++
Sbjct: 328 GPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNV------------II 375
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
D+ + G E A + + M K VV W L + G+V+ V + E
Sbjct: 376 DMYMKCGKPEMACRVFDLMSNK-TVVSWNSLTAGFIRNGDVESAWEVFNQIPE 427
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 168/353 (47%), Gaps = 39/353 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y R + PK+A+ ++ M AG+ P T+ V+ A +L L++G ++ +
Sbjct: 200 WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIG 259
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
LGL+ N+ + + +Y K G + A+++FDE +R L +N I++ ++ G A+EA+
Sbjct: 260 ELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALA 319
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + + G PD VTM+S SA L DL H YV +++ + + N +IDM
Sbjct: 320 ILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYV--IRNGLEGWDSIGNVIIDM 377
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG------------------------ 304
Y KCG+ ++A +VF + V SW S+ G+ NG
Sbjct: 378 YMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMI 437
Query: 305 -------LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
L +A++ F M+ GI+ + VT +G+ SAC + G + K H + + KN
Sbjct: 438 SGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTY-IEKNGI 496
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ R +VD+ R G + A + M + +V W +G GN
Sbjct: 497 PCDMRLNT--ALVDMFARCGDPQSAMQVFNKMTER-DVSAWTAAIGTMAMEGN 546
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I + + A++++ M G+ D T+ + A L A E+ + +H+
Sbjct: 430 AVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHT 489
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ G+ + + + ++++ GD + A +VF++ ER + +W A I ++ +G +
Sbjct: 490 YIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEG 549
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A +F + G +PD V V V +AC G +E L H + +
Sbjct: 550 ATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGL--HIFSLMEDHGISPQIEHYGCM 607
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+ G+ G + A+ + + +PN W S++
Sbjct: 608 VDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLL 640
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 196/304 (64%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ Y KAGD AR++FD PER + SW +I G +Q R ++A+++F ++ G E D
Sbjct: 150 MIAGYVKAGDQAHARELFDAMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEAD 209
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V ++SV +ACG LG ++L VH++V V+ + ++NS+IDMY KCG ++ A +V
Sbjct: 210 GVALLSVLAACGDLGAVDLGEWVHRFV--VRRGLCQEIPLMNSIIDMYMKCGCIEKAVEV 267
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F +++ +V +WT++I G+A +GL +A++ F M + PN VTF+ +LSAC H G
Sbjct: 268 FEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLT 327
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ +F +M + Y+I+PR HYGCMVDLLGRAG L+EA+ +V+ MP+KAN IWG L+
Sbjct: 328 DLGRWYFNIMVSQYRIKPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLA 387
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A G+ +GE HL ELEP + G Y++LSNI+A + W +V ++R M+ R L +
Sbjct: 388 AARTHGDAGLGEQALLHLIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNV 447
Query: 462 PAYS 465
P S
Sbjct: 448 PGAS 451
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 112/229 (48%), Gaps = 11/229 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y +++ P+KA++++ M G+ D L VL A L A+++G +H V
Sbjct: 178 WTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDLGEWVHRFVV 237
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + I +Y K G EKA +VF+ E+ + +W +IAG + G +A++
Sbjct: 238 RRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVE 297
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSL 265
MF +++ P+ VT +++ SAC +G +L ++ F + Q K +
Sbjct: 298 MFCRMERENMAPNAVTFLAILSACSHVGLTDLG----RWYFNIMVSQYRIKPRVEHYGCM 353
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVG---YAANGLANEAL 310
+D+ G+ G + A + + + N + W +++ + GL +AL
Sbjct: 354 VDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQAL 402
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
++V + CG + D + VF + + D + N +I Y K G A ++F
Sbjct: 118 SLVQLYCTCGHVADA-------RSVFDEMAVR--DVVAWNVMIAGYVKAGDQAHARELFD 168
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + NV SWT++I GYA +A++ F M+ GI + V + VL+AC G V
Sbjct: 169 AMPERNVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGAVDL 228
Query: 344 GK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ H F + + + Q P ++D+ + G +E+A + EGM K +VV W L+
Sbjct: 229 GEWVHRFVVRRGLCQEIPLM---NSIIDMYMKCGCIEKAVEVFEGMEEK-SVVTWTTLIA 284
Query: 402 A 402
Sbjct: 285 G 285
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 208/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +AL M R G PD +TL VL + ++ G ++H A
Sbjct: 138 WNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAF 197
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G +S+ F S I +Y+ + + KVFD P R WN+++AG +Q+G +EA+
Sbjct: 198 RNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALG 257
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P VT S+ CG+L L Q+H YV + + + + +SLIDM
Sbjct: 258 IFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV--ICGGFEDNVFISSSLIDM 315
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A+ +F ++ P+V SWT+MI+GYA +G A EAL F M +PNH+TF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G V +G +F+ M N Y I P H+ + D LGRAG L+EA + M
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +W L+ AC N + E VAK + ELEP S G++VVLSN+Y++ G W E
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ + + K PA S
Sbjct: 496 LRESMRKKGMKKDPACS 512
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 143/301 (47%), Gaps = 31/301 (10%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK-------------- 168
+LP LK+ L +G LH+LA+R G ++ F + ++LY K
Sbjct: 52 SLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIV 111
Query: 169 -----AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+ FE RKVFDE ER + SWN ++ G +++GR EA+ + + GF PD
Sbjct: 112 DVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSF 171
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ +V D++ L+VH + F ++ SD + +SLIDMY C R D + KVF
Sbjct: 172 TLSTVLPIFAECADVKRGLEVHGFAF--RNGFDSDVFVGSSLIDMYANCTRTDYSVKVFD 229
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + W S++ G A NG EAL F M ++G+RP VTF ++ C + ++
Sbjct: 230 NLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRF 289
Query: 344 GKHFFEMMKNVYQI----EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
GK + Y I E ++D+ + G + A + + M +VV W +
Sbjct: 290 GKQL-----HAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMS-SPDVVSWTAM 343
Query: 400 M 400
+
Sbjct: 344 I 344
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 229/415 (55%), Gaps = 9/415 (2%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + KC L++ I+ + R A WN II + + E K L +++
Sbjct: 378 ANTILDMYGKCGALMEACLIFEEMERRD-------AVSWNAIIAAHEQNEEIVKTLSLFV 430
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M R+ + PD +T V+KA AL G ++H ++ G+ + F S + +Y K G
Sbjct: 431 SMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCG 490
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+A K+ E+ SWN+II+G S +++ A F + + G PD+ T +V
Sbjct: 491 MLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLD 550
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C ++ +EL Q+H + +K + SD + ++L+DMY KCG M + +F + + +
Sbjct: 551 VCANMATIELGKQIHAQI--LKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDY 608
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W++MI YA +GL +A++ F M+ ++PNH F+ VL AC H G V +G H+F+
Sbjct: 609 VTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQK 668
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M + Y ++P+ HY CMVDLLGR+G + EA ++E MP +A+ VIW L+ C+ GNV+
Sbjct: 669 MLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVE 728
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ E L +L+P AYV+L+N+YA G+W EV ++R++MK+ L K P S
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCS 783
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 163/328 (49%), Gaps = 26/328 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ Y +K+++I++ M + D T ++LKA + +G Q+H LA+
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAI 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G E++ S + +YSK + A +VF E PER L W+A+IAG Q+ R E +
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G T SV +C L +L Q+H + +KS D+++ + +DM
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA--LKSDFAYDSIIGTATLDM 283
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC RM A+KVF + P S+ ++IVGYA +ALD F ++ + + + ++
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G L+AC +HG V+ G F + N ++D+ G+ G L
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANT------------ILDMYGKCGAL 391
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEK 405
EA + E M + + V W ++ A E+
Sbjct: 392 MEACLIFEEME-RRDAVSWNAIIAAHEQ 418
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 163/336 (48%), Gaps = 9/336 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLA 147
+N II Y R + KALDI+ + R + D +L L A C + + G QLH LA
Sbjct: 308 YNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTA-CSVIKRHLEGIQLHGLA 366
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL N + + +Y K G +A +F+E R SWNAIIA Q+ + +
Sbjct: 367 VKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTL 426
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ + + EPDD T SV AC L ++H + +KS D + ++L+D
Sbjct: 427 SLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRI--IKSGMGLDWFVGSALVD 484
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MYGKCG + A K+ +++ SW S+I G+++ + A F M E GI P++ T
Sbjct: 485 MYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYT 544
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ VL C + ++ GK + + Q+ +VD+ + G ++++R M E
Sbjct: 545 YATVLDVCANMATIELGKQIHAQILKL-QLHSDVYIASTLVDMYSKCGNMQDSRLMFEKA 603
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
P K + V W ++ A G +GE +E++
Sbjct: 604 P-KRDYVTWSAMICAYAYHG---LGEKAINLFEEMQ 635
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 33/244 (13%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T +L+ L AL G+Q+H+ + G + + + Y K+ A KVFD
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 183 PERKLGSWNAIIAGLS-------------------------------QDGRAKEAIDMFI 211
P+R + SWN +I G + +G +++I++F+
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++ D T + AC + D L LQVH Q+ ++D + ++L+DMY K
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGF--ENDVVTGSALVDMYSK 185
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
C ++D A++VF E+ + N+ W+++I GY N E L F M + G+ + T+ V
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 332 LSAC 335
+C
Sbjct: 246 FRSC 249
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 155/389 (39%), Positives = 218/389 (56%), Gaps = 37/389 (9%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALE--IGRQLHSLAVRLGLE-SNEFCESGFISLYSK 168
M AGV P+ T +L L + +G LH A +LGL+ ++ + + +YSK
Sbjct: 5 MRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGMYSK 64
Query: 169 AGDFEKAR-------------------------------KVFDENPERKLGSWNAIIAGL 197
G F KAR K+FDE PER L SW A+I G
Sbjct: 65 RGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGF 124
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ G +EA+ F ++ G +PD V +++ +AC +LG L L +H+YV V K+
Sbjct: 125 VKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYV--VSQDFKN 182
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + NSLID+Y +CG ++ A +VF ++++ V SW S+IVG+AANG A+E+L F M+
Sbjct: 183 NVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQ 242
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
E G +PN VTF G L+AC H G V+EG +F+ MK Y+I PR HYGC+VDL RAG L
Sbjct: 243 EEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRL 302
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
E+A +V+ MPMK N V+ G L+ AC G N + E V KHL +L S YV+LSN+
Sbjct: 303 EDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNM 362
Query: 437 YASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YA+ G WE ++R MK L K P +S
Sbjct: 363 YAADGKWEGASKMRRKMKGLGLKKEPGFS 391
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + + ++AL + M +GV PD + L A L AL G +H V
Sbjct: 117 WTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVV 176
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++N + I LY + G E AR+VFD+ +R + SWN++I G + +G A E++
Sbjct: 177 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLV 236
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSLI 266
F +++ GF+P+ VT +AC +G +E L +Y +K + + L+
Sbjct: 237 YFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGL---RYFQSMKRDYRISPRIEHYGCLV 293
Query: 267 DMYGKCGRMDLAYKVFWEID-QPN 289
D+Y + GR++ A KV + +PN
Sbjct: 294 DLYSRAGRLEDALKVVQSMPMKPN 317
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 209/383 (54%), Gaps = 14/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W + YT ++A+D++ M GV PD Y + VL A + L+ G +
Sbjct: 180 WTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHME 239
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ N F + ++LY+K G EKAR VFD E+ + +W+ +I G + + KE I+
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA------LQVHKYVFQVKSKQKSDTLML 262
F+ + + +PD ++V S+C SLG L+L + H+++ ++ M
Sbjct: 300 FFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL--------TNLFMA 351
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LIDMY KCG M ++VF E+ + ++ + I G A NG + F + GI
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ TF+G+L CVH G +Q+G FF + VY ++ HYGCMVDL GRAG+L++A
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MPM+ N ++WG L+ C + ++ E V K L LEPW+ G YV LSNIY+ G
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGR 531
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+E +R +M + + KIP YS
Sbjct: 532 WDEAAEVRDMMNRKGMKKIPGYS 554
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 202/402 (50%), Gaps = 15/402 (3%)
Query: 37 ISAASSFLDTHEDPAKIVATQLSKCTNLLQL---------NQIYAHIIRTHMLHSYSAAF 87
IS AS+F + ++ L T L+ L Y+ ++ +H + F
Sbjct: 20 ISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHT--QFPNIF 77
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+N +I + + LD+++ + + G+ +T P+VLKA + ++G LHSL
Sbjct: 78 LYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLV 137
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ G + + +S+YS +G A KVF+E PER + +W A+ +G + G+ +EAI
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAI 197
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D+F + + G PD +V V SAC +GDL+ + K++ +++ ++ S + +L++
Sbjct: 198 DLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNS--FVRTTLVN 255
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG+M+ A VF + + ++ +W++MI GYA+N E ++ F M + ++P+ +
Sbjct: 256 LYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFS 315
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VG LS+C G + G+ ++ ++ ++D+ + G + + + M
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
K ++VI + K G+VK+ V ++L DG+
Sbjct: 375 KEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 213/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y + +KAL+ + M G+ D TL +KAS L L+ G+Q+ + A+
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG ++ + SG + +Y K GD A ++F E +W +I+G ++G A+
Sbjct: 1127 KLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALS 1186
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ ++ G +PD+ T ++ A L LE Q+H V VK D + SL+DM
Sbjct: 1187 VYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANV--VKLDYSLDHFVGTSLVDM 1244
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + AY+VF ++D V W +M++G A +G +EAL+ F M+ +GI+P+ VTF
Sbjct: 1245 YCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G E +F+ M Y I P HY C+VD LGRAG ++EA ++ MP
Sbjct: 1305 IGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
KA+ ++ L+GAC G+ + + VA L L+P AYV+LSNIYA+ W++V
Sbjct: 1365 FKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTD 1424
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK +N+ K P +S
Sbjct: 1425 ARNMMKLKNVKKDPGFS 1441
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 174/328 (53%), Gaps = 15/328 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC-----QLFALEIGRQL 143
WN +I Y + +A+ + + R G+ PD +TL VL+A + F L G Q+
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTL--GSQV 1020
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H A++ G+ ++ F + I LYSK G ++A + + L SWNAI+ G + ++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
++A++ F + + G D++T+ + A G L +L+ Q+ Y +K +D + +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYA--IKLGFNNDLWVSS 1138
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
++DMY KCG M A ++F EI +P+ +WT+MI GY NG + AL +H MR SG++P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEAR 381
+ TF ++ A +++GK ++ NV +++ H+ +VD+ + G +++A
Sbjct: 1199 DEYTFATLIKASSCLTALEQGK---QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ M ++ VV W ++ + G+V
Sbjct: 1256 RVFRKMDVR-KVVFWNAMLLGLAQHGHV 1282
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 30/352 (8%)
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
Q+ A+ ++ S F WN + + A+D + + R+ + D TL I+L
Sbjct: 842 QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
A+ L++G Q+H+L ++ + +++YSKAG A K F +PE L
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD----LELALQV 244
SWN +I+ +Q+ EAI F L + G +PD T+ SV AC S GD L QV
Sbjct: 962 SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQV 1020
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H V+ +K +D+ + +LID+Y K G+MD A + +++SW +++ GY +
Sbjct: 1021 H--VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ +AL+ F M E GI + +T + A +++GK QI+
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGK----------QIQAYAIKL 1128
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
G DL +G+L+ M +K G + A E FG + + VA
Sbjct: 1129 GFNNDLWVSSGVLD--------MYIKC-----GDMPNALELFGEISRPDEVA 1167
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
+++ + L++G++ H+ V G + + + I++YSK G AR+VFD++ +R L
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 189 SWNAIIAGLSQDGRAK-----EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+WN+I+A +Q + E +F L++ GF +T+ + C G ++++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH Y VK + D + +L+++Y K G + A +F ++ + + W M+ Y N
Sbjct: 739 VHGYA--VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+EAL F SG P+ CV GG
Sbjct: 797 SFQDEALRFFSAFHRSGFFPDFSNL-----HCVIGG 827
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 29/266 (10%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+++ +H AV++G E + F +++Y K G +AR +FD+ PER WN ++
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++ EA+ F + GF PD + V S +++ ++ QVK+
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNS----DVSNNRKRHAEQVKA--- 845
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
A K+F N+ +W + + G A+DCF +
Sbjct: 846 --------------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
S I + VT V +LSA V + G+ ++ P ++++ +AG+
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGV 944
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
+ A P + +++ W ++ +
Sbjct: 945 VYAAEKTFINSP-ELDLISWNTMISS 969
>gi|115479131|ref|NP_001063159.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|50251469|dbj|BAD28534.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|50252346|dbj|BAD28379.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113631392|dbj|BAF25073.1| Os09g0412900 [Oryza sativa Japonica Group]
gi|215717103|dbj|BAG95466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736827|dbj|BAG95756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 503
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 217/371 (58%), Gaps = 10/371 (2%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF--ALEIGRQLHSLAVRLGLESNE-FC 158
P A +++ + R G+ PD +TLP VLKA +L +L + +HS AV+ GL S +
Sbjct: 85 PSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSEAVKDGLASAVVYV 144
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+ ++ YS G E+A +VFDE P R + SWN + + +GR + +++F + + G
Sbjct: 145 PNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHELCVELFAEMLEAGS 204
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL-IDMYGKCGRMDL 277
PD T V + SA LG+L L H QV S++ TL L + ++MY KC +
Sbjct: 205 VPDPTTFVVMLSAAAELGNLALGKWAHG---QVVSRRLDMTLQLGTAAVNMYSKCATVSY 261
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F + NV +WT+MIVG+A NGLA EAL+ F M+ S I PN+VTF+G+L AC H
Sbjct: 262 ALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSH 321
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V EG+ FF M++VY I P HY MVD+LGR GLL+EA V GMP++A+ V+W
Sbjct: 322 AGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEADPVVWR 381
Query: 398 CLMGACEKFGN---VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L+ AC+ + +++ + V L ELEP G YV++SNIY G W+E + R VM+
Sbjct: 382 TLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKARRVMR 441
Query: 455 HRNLAKIPAYS 465
+ K+ S
Sbjct: 442 EGGMKKVAGES 452
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S C L + Q++ + R ++ WN + + ++++ M AG +
Sbjct: 153 SACGQLERAVQVFDEMPRRTVVS-------WNTALTACAGNGRHELCVELFAEMLEAGSV 205
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T ++L A+ +L L +G+ H V L+ + +++YSK A ++
Sbjct: 206 PDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVNMYSKCATVSYALRL 265
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+ P R + +W A+I G +Q+G A+EA+++F +K P+ VT + + AC G
Sbjct: 266 FERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSHAG-- 323
Query: 239 ELALQVHKYVFQVKSKQKSDTLML--NSLIDMYGKCGRMDLAY 279
L + ++ +++ +M ++++D+ G+ G + AY
Sbjct: 324 -LVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAY 365
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 213/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y + +KAL+ + M G+ D TL +KAS L L+ G+Q+ + A+
Sbjct: 1067 WNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAI 1126
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG ++ + SG + +Y K GD A ++F E +W +I+G ++G A+
Sbjct: 1127 KLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALS 1186
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ ++ G +PD+ T ++ A L LE Q+H V VK D + SL+DM
Sbjct: 1187 VYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANV--VKLDYSLDHFVGTSLVDM 1244
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + AY+VF ++D V W +M++G A +G +EAL+ F M+ +GI+P+ VTF
Sbjct: 1245 YCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTF 1304
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G E +F+ M Y I P HY C+VD LGRAG ++EA ++ MP
Sbjct: 1305 IGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMP 1364
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
KA+ ++ L+GAC G+ + + VA L L+P AYV+LSNIYA+ W++V
Sbjct: 1365 FKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTD 1424
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK +N+ K P +S
Sbjct: 1425 ARNMMKLKNVKKDPGFS 1441
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 174/328 (53%), Gaps = 15/328 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC-----QLFALEIGRQL 143
WN +I Y + +A+ + + R G+ PD +TL VL+A + F L G Q+
Sbjct: 963 WNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTL--GSQV 1020
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H A++ G+ ++ F + I LYSK G ++A + + L SWNAI+ G + ++
Sbjct: 1021 HVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKS 1080
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
++A++ F + + G D++T+ + A G L +L+ Q+ Y +K +D + +
Sbjct: 1081 RKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYA--IKLGFNNDLWVSS 1138
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
++DMY KCG M A ++F EI +P+ +WT+MI GY NG + AL +H MR SG++P
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQP 1198
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEAR 381
+ TF ++ A +++GK ++ NV +++ H+ +VD+ + G +++A
Sbjct: 1199 DEYTFATLIKASSCLTALEQGK---QIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAY 1255
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ M ++ VV W ++ + G+V
Sbjct: 1256 RVFRKMDVR-KVVFWNAMLLGLAQHGHV 1282
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 163/352 (46%), Gaps = 30/352 (8%)
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
Q+ A+ ++ S F WN + + A+D + + R+ + D TL I+L
Sbjct: 842 QVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIIL 901
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
A+ L++G Q+H+L ++ + +++YSKAG A K F +PE L
Sbjct: 902 SAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLI 961
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD----LELALQV 244
SWN +I+ +Q+ EAI F L + G +PD T+ SV AC S GD L QV
Sbjct: 962 SWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRAC-STGDEGEYFTLGSQV 1020
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H V+ +K +D+ + +LID+Y K G+MD A + +++SW +++ GY +
Sbjct: 1021 H--VYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ +AL+ F M E GI + +T + A +++GK QI+
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGK----------QIQAYAIKL 1128
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
G DL +G+L+ M +K G + A E FG + + VA
Sbjct: 1129 GFNNDLWVSSGVLD--------MYIKC-----GDMPNALELFGEISRPDEVA 1167
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 12/216 (5%)
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
+++ + L++G++ H+ V G + + + I++YSK G AR+VFD++ +R L
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 189 SWNAIIAGLSQDGRAK-----EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+WN+I+A +Q + E +F L++ GF +T+ + C G ++++
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH Y VK + D + +L+++Y K G + A +F ++ + + W M+ Y N
Sbjct: 739 VHGYA--VKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+EAL F SG P+ CV GG
Sbjct: 797 SFQDEALRFFSAFHRSGFXPDFSNL-----HCVIGG 827
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 29/266 (10%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+++ +H AV++G E + F +++Y K G +AR +FD+ PER WN ++
Sbjct: 733 VQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKA 792
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++ EA+ F + GF PD + V S +++ ++ QVK+
Sbjct: 793 YVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNS----DVSNNRKRHAEQVKA--- 845
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
A K+F N+ +W + + G A+DCF +
Sbjct: 846 --------------------YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
S I + VT V +LSA V + G+ ++ P ++++ +AG+
Sbjct: 886 LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKS-SFAPVVPVSNSLMNMYSKAGV 944
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
+ A P + +++ W ++ +
Sbjct: 945 VYAAEKTFINSP-ELDLISWNTMISS 969
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 217/377 (57%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + A +A + M ++G P+ TL VL A ++ +L++G+Q+H+ ++
Sbjct: 390 WNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSI 449
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + F + I +YSK G AR +F E E+ S+N +I G SQ E++
Sbjct: 450 RRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLL 508
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G + D V+ + SAC +L + ++H + V+ + NSL+D+
Sbjct: 509 LFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVL--VRRLLSGHPFLSNSLLDL 566
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F +I + +V+SW +MI+GY +G + A + F M+ G+ +HV++
Sbjct: 567 YTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSY 626
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V +GK +F M IEP+ HY CMVDLLGRAG L + ++ MP
Sbjct: 627 IAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 685
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN +WG L+GAC GN+++ +W A+HL EL+P G Y ++ N+YA G W E +
Sbjct: 686 FPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANK 745
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K PAYS
Sbjct: 746 IRKLMKSRKVQKNPAYS 762
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 168/313 (53%), Gaps = 7/313 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ I + L ++ MS V+P TL +L A +L + ++GR++H ++
Sbjct: 289 WNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSI 348
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + F + + +Y+K G EKA +F++ +R + SWNA+IA L Q+G EA
Sbjct: 349 KRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFR 408
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++K G P+ +T+V+V AC + L++ Q+H + ++ D + N+LIDM
Sbjct: 409 LVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW--SIRRGLMFDLFISNALIDM 466
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ LA +F ++ +V S+ ++I+GY+ + E+L F MR GI + V+F
Sbjct: 467 YSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSF 525
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+G LSAC + + GK +++ + P ++ ++DL + G+L A + +
Sbjct: 526 MGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKI 583
Query: 388 PMKANVVIWGCLM 400
K +V W ++
Sbjct: 584 T-KKDVASWNTMI 595
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 166/332 (50%), Gaps = 11/332 (3%)
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
++R H L SA F WN++ R + P +AL +Y M R+ V PD T P L A+
Sbjct: 71 VLRHHPLRLRSA-FLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAA 129
Query: 134 LFAL--EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
A + G +LH+ A+R G ++ F + ++ Y+ G AR+VFDE PER + SWN
Sbjct: 130 AVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPERDVVSWN 189
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
++++ +G +A + + + GF + ++VSV ACG+ + + L +H V
Sbjct: 190 SLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIH--ALAV 247
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
K + + N+L+DMYGK G ++ + +VF + + N SW S I + G + L
Sbjct: 248 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 307
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVD 369
F M E + P +T +L A V G G+ H + +K ++ A+ +VD
Sbjct: 308 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYS-IKRAMDLDIFVAN--SLVD 364
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ + G LE+A + E M + NVV W ++
Sbjct: 365 MYAKFGSLEKASTIFEQMKDR-NVVSWNAMIA 395
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 242/447 (54%), Gaps = 49/447 (10%)
Query: 67 LNQIYAHIIRTHMLHSYSAAFH--------WNNIIRLYTRLEAPKKALDIYIFMSRA--- 115
L Q+++ II + + H Y FH +NN+IR Y+ P ++L +
Sbjct: 51 LQQLHSQIITSSLFHHY--PFHNNLTSLLLFNNLIRSYSLSLFPHESLKFFTHTLNNLTH 108
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
+ D +TL + A L G LH + ++G E++ F ++G + +YS G A
Sbjct: 109 SLSLDSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDA 168
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEA------------------IDMFIGLKKC- 216
+VF E P+R +WN I+GL + G+ + A ID + + K
Sbjct: 169 AQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPL 228
Query: 217 -------------GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
G EP++VT+++V A LG++++ VH YV + + D ++N
Sbjct: 229 KALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYV-EKRGFNAVDIRIVN 287
Query: 264 SLIDMYGKCGRMDLAYKVFWEID--QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+LID+Y KCG ++ A +F E+ + N SW S++ GYA G+ EA+D F M ++G+
Sbjct: 288 ALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGV 347
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RPNHV F+ +LSAC H G V+EG FF M N Y + P HYGC++D+LGRAG L EA
Sbjct: 348 RPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAE 407
Query: 382 AMVEGMPMK-ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ +P + AN VIW L+GAC NV++G+ V K + E+E G YV++SNI+AS
Sbjct: 408 KVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLMSNIFASV 467
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYSLA 467
G +++VER+R ++ RN+ K+P YS+
Sbjct: 468 GRFKDVERLREMIDKRNVFKLPGYSIV 494
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 141/378 (37%), Positives = 212/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II ++ +A+ + M G++PD T +L A + G Q+HS +
Sbjct: 429 WNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYII 488
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER-KLGSWNAIIAGLSQDGRAKEAI 207
++GL+ + +++Y+K + A VF + E L SWNAI++ Q +A E
Sbjct: 489 KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVF 548
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + +PD++T+ ++ C L LE+ QVH F VKS D + N LID
Sbjct: 549 RLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVH--CFSVKSGLVVDVSVSNRLID 606
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A VF P++ SW+S+IVGYA GL +EAL+ F M+ G++PN VT
Sbjct: 607 MYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVT 666
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
++GVLSAC H G V+EG HF+ M+ I P H CMVDLL RAG L EA ++ M
Sbjct: 667 YLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKM 726
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
++ +W L+ +C+ GNV + E A+++ +L+P + A V+LSNI+AS G W+EV
Sbjct: 727 GFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVA 786
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R +MK + K+P S
Sbjct: 787 RLRNLMKQMGVQKVPGQS 804
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 153/323 (47%), Gaps = 10/323 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++I +T+L +AL ++ M R G P+ + V A L E GRQ+H +
Sbjct: 327 WASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMC 386
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ GL N F +Y+K G A + F + L SWNAIIA S G EAI
Sbjct: 387 AKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAI 446
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
F + G PD +T +S+ ACGS + Q+H Y+ ++ +++ + NSL+
Sbjct: 447 YFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEA--AVCNSLLT 504
Query: 268 MYGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY KC + A+ VF ++ + N+ SW +++ + A E F M S +P+++
Sbjct: 505 MYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNI 564
Query: 327 TFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T +L C ++ G H F +K+ ++ ++ ++D+ + G L+ AR V
Sbjct: 565 TITTILGTCAELASLEVGNQVHCFS-VKSGLVVDVSVSNR--LIDMYAKCGSLKHARD-V 620
Query: 385 EGMPMKANVVIWGCLMGACEKFG 407
G ++V W L+ +FG
Sbjct: 621 FGSTQNPDIVSWSSLIVGYAQFG 643
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 167/342 (48%), Gaps = 22/342 (6%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFAL 137
++ +S N+ I L + ++ALD + F + + + + T ++ A + +L
Sbjct: 114 LIKQHSRELSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSL 173
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+ G+++H ++ + + ++ +++Y K G + ARK FD R + SW +I+G
Sbjct: 174 KYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGY 233
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
SQ+G+ +AI M+I + + G+ PD +T S+ AC GD++L Q+H +V +KS
Sbjct: 234 SQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHV--IKSGYDH 291
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM- 316
+ N+LI MY + G++ A VF I ++ SW SMI G+ G EAL F M
Sbjct: 292 HLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMF 351
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHF------FEMMKNVYQIEPRFAHYGC-MVD 369
R+ +PN F V SAC + + G+ F + +NV+ GC + D
Sbjct: 352 RQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA--------GCSLCD 403
Query: 370 LLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + G L A RA + ++V W ++ A G+V
Sbjct: 404 MYAKFGFLPSAIRAFYQ--IESPDLVSWNAIIAAFSDSGDVN 443
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 233/424 (54%), Gaps = 11/424 (2%)
Query: 44 LDTHED--PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEA 101
+D H D A + SKC + + Y + + ++ WN +I Y++
Sbjct: 313 MDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIA-------WNALISGYSQCGD 365
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
A+ ++ M + + TL VLK+ L A+++ +Q+H+++++ G+ S+ + +
Sbjct: 366 HLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINS 425
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ Y K ++A K+F+E L ++ ++I SQ G +EA+ +++ ++ +PD
Sbjct: 426 LLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPD 485
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
S+ +AC +L E Q+H V +K D NSL++MY KCG ++ A +
Sbjct: 486 PFICSSLLNACANLSAYEQGKQLH--VHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRA 543
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F EI + SW++MI GYA +G EAL F+ M G+ PNH+T V VL AC H G V
Sbjct: 544 FSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLV 603
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EGK +FE M+ ++ I+P HY CM+DLLGR+G L EA +V +P +A+ +WG L+G
Sbjct: 604 NEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLG 663
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A N+++G+ AK L +LEP G +V+L+NIYAS G+WE V ++R MK + K
Sbjct: 664 AARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKE 723
Query: 462 PAYS 465
P S
Sbjct: 724 PGMS 727
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 4/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W++++ Y + ++AL ++ M GV + +T P VLKA L +GR++H +AV
Sbjct: 50 WSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAV 109
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ES+ F + + +Y+K G + +R++F ER + SWNA+ + Q EA+
Sbjct: 110 VTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVG 169
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P++ ++ + +AC L + +L ++H +K D N+L+DM
Sbjct: 170 LFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG--LMLKMGLDLDQFSANALVDM 227
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G ++ A VF +I P+V SW ++I G + + AL M+ SG RPN T
Sbjct: 228 YSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
L AC G + G+ + + FA G +VD+ + ++++AR + MP
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG-LVDMYSKCEMMDDARRAYDSMP 346
Query: 389 MKANVVIWGCLMGACEKFGN 408
K +++ W L+ + G+
Sbjct: 347 -KKDIIAWNALISGYSQCGD 365
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 166/328 (50%), Gaps = 16/328 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II + AL + M +G P+ +TL LKA + E+GRQLHS +
Sbjct: 252 WNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLI 311
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ S+ F G + +YSK + AR+ +D P++ + +WNA+I+G SQ G +A+
Sbjct: 312 KMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVS 371
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + + T+ +V + SL +++ Q+H +KS SD ++NSL+D
Sbjct: 372 LFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIH--TISIKSGIYSDFYVINSLLDT 429
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC +D A K+F E ++ ++TSMI Y+ G EAL + M+++ I+P+
Sbjct: 430 YGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFIC 489
Query: 329 VGVLSACVHGGKVQEGKHF------FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
+L+AC + ++GK F M +++ +V++ + G +E+A
Sbjct: 490 SSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNS-------LVNMYAKCGSIEDADR 542
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVK 410
+P + +V W ++G + G+ K
Sbjct: 543 AFSEIPNRG-IVSWSAMIGGYAQHGHGK 569
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 136/262 (51%), Gaps = 4/262 (1%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+LH+ ++ G + + ++LYSK F ARK+ DE+ E + SW+++++G Q+G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+ +F + G + ++ T SV AC DL + +VH V + +SD +
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHG--MAVVTGFESDGFV 119
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L+ MY KCG +D + ++F I + NV SW ++ Y + L EA+ F M SGI
Sbjct: 120 ANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
PN + +L+AC + G+ +M + +F+ +VD+ +AG +E A
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFS-ANALVDMYSKAGEIEGAV 238
Query: 382 AMVEGMPMKANVVIWGCLMGAC 403
A+ + + +VV W ++ C
Sbjct: 239 AVFQDIA-HPDVVSWNAIIAGC 259
>gi|297827165|ref|XP_002881465.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327304|gb|EFH57724.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 264 bits (675), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 218/395 (55%), Gaps = 9/395 (2%)
Query: 76 RTHMLHSY-SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
RT +LHS S WN + R Y+ + P +++ +Y M R + P+ T P +LKA
Sbjct: 67 RTLLLHSSDSTPSTWNMLTRGYSSSDTPVESIWVYSEMKRRRIKPNKLTFPFLLKACASF 126
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII 194
L GRQ+ ++ G +S+ + + I LY ARKVFDE ER + SWN+I+
Sbjct: 127 LGLTAGRQIQVEVLKHGFDSDVYVGNNLIHLYGSCKKTSDARKVFDEMTERNVVSWNSIM 186
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
L ++G+ ++ F + F PD+ TMV + SACG G+L L VH V + +
Sbjct: 187 TALVENGKFNLVVECFFEMIGRQFCPDETTMVVLLSACG--GNLSLGKLVHSQV--MVRE 242
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF- 313
+ + + +L+DMY K G + A VF + NV +W++MIVG A G A EAL F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLKYARLVFERMADKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M+ES +RPN+VTF+GVL AC H G V +G +F M+ ++I+P HYG MVD+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKRHKIKPMMIHYGAMVDILGR 362
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACE---KFGNVKMGEWVAKHLQELEPWSDGAY 430
AG L EA ++ MP + + V+W L+ AC + +GE V K L ELEP G
Sbjct: 363 AGRLNEAYDFIQKMPFEPDAVVWRTLLSACSIHHDEDDKGIGEKVKKRLIELEPKRSGNL 422
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V+++N +A +W+E +R VMK + KI S
Sbjct: 423 VIVANRFAEARMWDEAAEVRRVMKETKMKKIAGES 457
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 221/412 (53%), Gaps = 37/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN++I Y + +ALD++ M R +L PD +TL VL A L L IG Q+HS
Sbjct: 246 WNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHI 305
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARK------------------------------ 177
V G + + + IS+YS+ G E AR+
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNE 365
Query: 178 ---VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+FD +R + +W A+I G Q G EAI++F + P+ T+ ++ S S
Sbjct: 366 AKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASS 425
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSW 293
L L Q+H VKS + + N+LI MY K G + A + F I + + SW
Sbjct: 426 LASLGHGKQIHGSA--VKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSW 483
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
TSMI+ A +G A EAL+ F M G+RP+H+T+VGV SAC H G V +G+ +F+MMK+
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
V +I P +HY CMVDL GRAGLL+EA+ +E MP++ +VV WG L+ AC + N+ +G+
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGK 603
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L LEP + GAY L+N+Y++ G WEE +IR MK + K +S
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 185/460 (40%), Gaps = 103/460 (22%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + KA+ I M R G+ P +TL VL + LE G+++HS V
Sbjct: 114 WTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIV 173
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA------------- 195
+LGL N + +++Y+K GD A+ VFD + + SWNA+IA
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMA 233
Query: 196 ------------------GLSQDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLG 236
G +Q G A+DMF L+ PD T+ SV SAC +L
Sbjct: 234 QFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLE 293
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC------------------------ 272
L + Q+H ++ V + ++LN+LI MY +C
Sbjct: 294 KLCIGEQIHSHI--VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFT 351
Query: 273 ---------GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
G M+ A +F + +V +WT+MIVGY +GL EA++ F M RP
Sbjct: 352 ALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRP 411
Query: 324 NHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKN------------------- 353
N T +LS +HG V+ G+ + + N
Sbjct: 412 NSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAF 471
Query: 354 -VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEKFGNV 409
+ + E + M+ L + G EEA + E M M + + + + + AC G V
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 410 KMGEWVAKHLQELEPW--SDGAYVVLSNIYASRGLWEEVE 447
G +++++ + Y + +++ GL +E +
Sbjct: 532 NQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + +S Y+K GD + + + FD P+R SW +I G G+ +AI + + +
Sbjct: 81 FSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE 140
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC---- 272
G EP T+ +V ++ + LE +VH ++ VK + + + NSL++MY KC
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFI--VKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 273 ---------------------------GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
G+MDLA F ++ + ++ +W SMI GY G
Sbjct: 199 MAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGY 258
Query: 306 ANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAH 363
ALD F M R+S + P+ T VLSAC + K+ G+ ++ + I +
Sbjct: 259 DLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLN 318
Query: 364 YGCMVDLLGRAGLLEEARAMVE 385
++ + R G +E AR ++E
Sbjct: 319 --ALISMYSRCGGVETARRLIE 338
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 219/412 (53%), Gaps = 37/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + P+K +D++ M +GV P+ T+ +L A +L L+ G+++H AV
Sbjct: 233 WTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 292
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------------- 189
R G+ N F S +SLY+K +AR VFD P R + S
Sbjct: 293 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFS 352
Query: 190 ----------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
WNA+I G ++GR++EA++MF ++K GF+P+++T+ S+ AC
Sbjct: 353 LFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACS 412
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L + ++H YVF + + D +L+ MY KCG ++L+ VF + + +V +W
Sbjct: 413 FSENLRMGKEIHCYVF--RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 470
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+MI+ A +G EAL F M S ++PN VTF GVLS C H V+EG F M
Sbjct: 471 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 530
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ +EP HY C+VD+ RAG L EA ++GMPM+ WG L+ AC + NV++ +
Sbjct: 531 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 590
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
AK L E+EP + G YV L NI + +W E ++R +MK R + K P S
Sbjct: 591 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 642
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKAS--CQLF--ALEIGRQLHSLAVRLGLESNEFCE 159
+A+ IY + G+ PD +P+ L A+ C + AL + +++H A R G+ S+ F
Sbjct: 147 EAIKIYSSLQERGIKPD---MPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVG 202
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ I Y K E AR+VFD+ R + SW ++ + + G ++ +D+F + G +
Sbjct: 203 NALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVK 262
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ +T+ S+ AC L DL+ ++H F V+ + + ++L+ +Y KC + A
Sbjct: 263 PNPMTVSSILPACAELKDLKSGKEIHG--FAVRHGMVVNLFVCSALVSLYAKCLSVREAR 320
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF + +V SW ++ Y N + F M G+R + T+ V+ C+ G
Sbjct: 321 MVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG 380
Query: 340 KVQEGKHFFEMMK 352
+ +E F M+
Sbjct: 381 RSEEAVEMFRKMQ 393
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I + GDF +AR++FD P+ + + +I+ L+ G + EAI ++ L++ G +PD
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
++ AC GD +VH + SD + N+LI YGKC ++ A +V
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDA--TRCGVMSDVFVGNALIHAYGKCKCVEGARRV 221
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++ +V SWTS+ Y G + +D F M SG++PN +T +L AC +
Sbjct: 222 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 281
Query: 342 QEGK--HFFE----MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ GK H F M+ N++ +V L + + EAR + + MP + +VV
Sbjct: 282 KSGKEIHGFAVRHGMVVNLFVC-------SALVSLYAKCLSVREARMVFDLMPHR-DVVS 333
Query: 396 WGCLMGA 402
W ++ A
Sbjct: 334 WNGVLTA 340
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 227/413 (54%), Gaps = 43/413 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS--- 145
W ++ Y + ++ L + M R+ V+PD L VL L G+ +HS
Sbjct: 62 WGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYIQ 121
Query: 146 -----LAVRL----------------------GLESNEFCES-GFISLYSKAGDFEKARK 177
+ RL G++ + S + Y+K G E AR
Sbjct: 122 VSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARS 181
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+ E+ + SW+A+I+ +++ + E +++F ++ CG PD++TM+SV SAC ++G
Sbjct: 182 IFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGS 241
Query: 238 LELALQVHKYV-----FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
L+ A +H V +++ S + N+LIDM+ KCG + LA +F + + NV +
Sbjct: 242 LDKARWIHSIVGNHGFYKILS-------ICNALIDMFSKCGSLTLALNMFNAMPRKNVIT 294
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
WTSMI +A +G AL F M+ G+ PN VTF+ +L AC H G V EG+ FE M
Sbjct: 295 WTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECML 354
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
Y+IEP+ HYGCMVDL+GRA L++EA ++E M ++ NV IWG L+ AC G++++G
Sbjct: 355 QEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIELG 414
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E+ AK + EL+P DGAYV+LSNI+A G W +++R +MK ++K YS
Sbjct: 415 EFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHGVSKETGYS 467
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 138/301 (45%), Gaps = 39/301 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R H +AVR+G + + F + + Y+ +AR+VFD PER L +W ++
Sbjct: 13 RGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNT 72
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+E + + +K+ PD V + +V S CG L +H Y+ QV S D
Sbjct: 73 QNYRETLLLLNKMKRSRVVPDQVILATVLSTCGHTRHLRSGKTIHSYI-QV-SDIFVDAR 130
Query: 261 MLNSLIDMYGKC-------------------------------GRMDLAYKVFWEIDQPN 289
+ ++LI+MY C G++++A +F + + +
Sbjct: 131 LSSALINMYASCMDMEMADKIYSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKD 190
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW++MI YA N +E L+ F+ M+ G+ P+ +T + V+SAC + G + + +
Sbjct: 191 VVSWSAMISAYAENNQPSEVLNLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHS 250
Query: 350 MMKN--VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++ N Y+I + ++D+ + G L A M MP K NV+ W ++ A G
Sbjct: 251 IVGNHGFYKI---LSICNALIDMFSKCGSLTLALNMFNAMPRK-NVITWTSMIAAFAMHG 306
Query: 408 N 408
+
Sbjct: 307 D 307
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 230/409 (56%), Gaps = 17/409 (4%)
Query: 49 DPAKIVATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK 104
DP VAT L +KC ++L ++ + +++ WN++I + + + +
Sbjct: 234 DP--FVATALLDMYAKCGSMLLAENVFDEMPHRNLVS-------WNSMIVGFVKNKLYGR 284
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A+ ++ + G PD ++ VL A L L+ G+Q+H V+ GL + ++ +
Sbjct: 285 AIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVD 342
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y K G FE A K+F +R + +WN +I G + ++A F + + G EPD+ +
Sbjct: 343 MYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEAS 402
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
S+ A S+ L +H +V +K+ ++ + +SL+ MYGKCG M AY+VF E
Sbjct: 403 YSSLFHASASIAALTQGTMIHSHV--LKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRE 460
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ NV WT+MI + +G ANEA+ F M G+ P ++TFV VLSAC H GK+ +G
Sbjct: 461 TKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDG 520
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+F M NV+ I+P HY CMVDLLGR G LEEA +E MP + + ++WG L+GAC
Sbjct: 521 FKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACG 580
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
K NV+MG VA+ L +LEP + G Y++LSNIY G+ EE + +R +M
Sbjct: 581 KHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLM 629
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 8/328 (2%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H + W +I +R P +AL + M G+ P+ +T +L A L G
Sbjct: 160 HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG 219
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+Q+H+L + ++ F + + +Y+K G A VFDE P R L SWN++I G ++
Sbjct: 220 QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKN 279
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
AI +F + G PD V++ SV SAC L +L+ QVH + VK
Sbjct: 280 KLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSI--VKRGLVGLVY 335
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ NSL+DMY KCG + A K+F +V +W MI+G +A F M G
Sbjct: 336 VKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG 395
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+ P+ ++ + A + +G ++K + R + +V + G+ G + +
Sbjct: 396 VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRIS--SSLVTMYGKCGSMLD 453
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFG 407
A + + NVV W ++ + G
Sbjct: 454 AYQVFRETK-EHNVVCWTAMITVFHQHG 480
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 33/306 (10%)
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
+PD L +L + +L +L+ Q+HS V ++ + + LY+K G
Sbjct: 97 VPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLL 153
Query: 178 VFDE--NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+F+ +P + +W +I LS+ + +A+ F ++ G P+ T ++ AC
Sbjct: 154 LFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHA 213
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L Q+H + K +D + +L+DMY KCG M LA VF E+ N+ SW S
Sbjct: 214 ALLSEGQQIHALIH--KHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNS 271
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEG 344
MIVG+ N L A+ F + G P+ V+ VLSAC VHG V+ G
Sbjct: 272 MIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRG 329
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+KN +VD+ + GL E+A + G + +VV W ++ C
Sbjct: 330 LVGLVYVKN------------SLVDMYCKCGLFEDATKLFCGGGDR-DVVTWNVMIMGCF 376
Query: 405 KFGNVK 410
+ N +
Sbjct: 377 RCRNFE 382
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 242/432 (56%), Gaps = 21/432 (4%)
Query: 42 SFLDTHEDPAKIVATQL---SKCTNLLQLNQIY-AHIIRTHMLHSYSAAFHWNNIIRLYT 97
++LD +E+ I L +KC +L+ +++ +R + W+ +I +
Sbjct: 230 AYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT--------WSALIGGFV 281
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCY----TLPIVLKASCQLFALEIGRQLHSLAVRLGLE 153
+ +A +++ M G+ C+ ++ L+ L L +G QLH+L + G+
Sbjct: 282 LCDRMTEAFNLFKDMLVEGM---CFLSATSVASALRVCASLADLRMGTQLHALLAKSGIH 338
Query: 154 SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL 213
++ + +S+Y+KAG +A +FDE + S+ A+++G Q+G+A+EA +F +
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKM 398
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
+ C +PD TMVS+ AC L L+ H V + +T + NSLIDMY KCG
Sbjct: 399 QACNVQPDIATMVSLIPACSHLAALQHGRCSHGSV--IIRGLALETSICNSLIDMYAKCG 456
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
R+DL+ +VF ++ ++ SW +MI GY +GL EA F M+ G P+ VTF+ +++
Sbjct: 457 RIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIA 516
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
AC H G V EGKH+F+ M + Y I PR HY CMVDLL R G L+EA ++ MP+KA+V
Sbjct: 517 ACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV 576
Query: 394 VIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
+WG L+GAC N+ +G+ V++ +Q+L P G +V+LSNI+++ G ++E +R +
Sbjct: 577 RVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQ 636
Query: 454 KHRNLAKIPAYS 465
K + K P S
Sbjct: 637 KVKGFKKSPGCS 648
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 5/347 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y+ A+D+Y M V P+ YT P VLKA L L GR +H+ A
Sbjct: 67 YNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAA 126
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+GL ++ F + I LY + F A VF + P R + +WNA++AG + G AI
Sbjct: 127 AVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA 186
Query: 209 MFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LI 266
+ ++ + G P+ T+VS+ G L VH Y + Q + +++ + L+
Sbjct: 187 HLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALL 246
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC + A +VF + N +W+++I G+ EA + F M G+
Sbjct: 247 DMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSA 306
Query: 327 TFVG-VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T V L C ++ G ++ I ++ + +AGL+ EA + +
Sbjct: 307 TSVASALRVCASLADLRMGTQLHALLAKS-GIHADLTAGNSLLSMYAKAGLINEATMLFD 365
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
+ +K + + +G L+ + G + V K +Q D A +V
Sbjct: 366 EIAIK-DTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMV 411
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 6/236 (2%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G AR+VFD P ++NA+I S G AID++ + P+ T V
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC +L DL +H + V +D + +LID+Y +C R A VF ++ +
Sbjct: 107 KACSALADLCAGRTIHAHAAAV--GLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQEGK--H 346
V +W +M+ GYA +G+ + A+ M++ G+RPN T V +L G + +G H
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH 224
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + Q E + ++D+ + L A + GM ++ N V W L+G
Sbjct: 225 AYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVR-NEVTWSALIGG 279
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 222/426 (52%), Gaps = 33/426 (7%)
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
R L S + WN++I Y +AL+++ M R GV D T VL A L
Sbjct: 260 RIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLG 319
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA-------------------------- 169
++ G Q+H+ ++G ++ +S + +YSK
Sbjct: 320 IIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMIT 379
Query: 170 -----GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
G + AR++FD P + L SWN++I G SQ+ EA+D+F + K G D +
Sbjct: 380 VYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFS 439
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ V SAC S+ LEL Q+ + + D ++ SL+D Y KCG ++ K+F
Sbjct: 440 LAGVISACASISSLELGEQIFARATIIG--LEFDQIISTSLVDFYCKCGLVEHGRKLFDR 497
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + + W SM++GYA NG EAL+ F MR G++P +TFVGVLSAC H G V+EG
Sbjct: 498 MMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEG 557
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ +F MK Y I P HY CMVDL RAGLLE+A ++E MP+KA+ +W ++ C
Sbjct: 558 RKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCV 617
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
GN +G+ VAK + +L+P + GAYV LS IYA+ W ++R +M + + K+P
Sbjct: 618 AHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKVPGC 677
Query: 465 SLATRL 470
S A L
Sbjct: 678 SWADSL 683
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 173/375 (46%), Gaps = 65/375 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGV---LPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN++I Y PK+A+ ++ +S + D + L V+ A L AL+ G+Q+H+
Sbjct: 138 WNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHA 197
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD----------------------ENP 183
V +E + S ++LY K GD + A V + N
Sbjct: 198 RIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMND 257
Query: 184 ERKLGS---------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
R++ WN++I+G + A EA+++F +++ G + D T SV SAC +
Sbjct: 258 ARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACST 317
Query: 235 LGDLELALQVHKYVFQV-----------------------------KSKQKSDTLMLNSL 265
LG ++ +QVH +V++V Q DT++LNS+
Sbjct: 318 LGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSM 377
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I +Y CGR+D A ++F + ++ SW SMIVG++ N EALD F M + G+R +
Sbjct: 378 ITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDK 437
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+ GV+SAC ++ G+ F + +E +VD + GL+E R + +
Sbjct: 438 FSLAGVISACASISSLELGEQIFA-RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFD 496
Query: 386 GMPMKANVVIWGCLM 400
M MK++ V W ++
Sbjct: 497 RM-MKSDEVPWNSML 510
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 171/360 (47%), Gaps = 75/360 (20%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSY---SAAFH-----WNNIIRL 95
LD H +A QL C N Y I R +LH S H N ++++
Sbjct: 4 LDLHS-----LARQLGSCNN-------YGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQM 51
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ES 154
Y+R + ++A ++ M + +C++ +++ L+ G + SL + +
Sbjct: 52 YSRCNSMREAQQLFEEMPKR----NCFSWNTMIEG-----YLKSGSKGKSLELFDSMPHK 102
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL- 213
+ F + IS ++K G+ E AR++F+E P + +WN++I G + +GR KEA+ +F L
Sbjct: 103 DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS 162
Query: 214 -----KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ CG D + +V AC +LG L+ Q+H + V + + D+++ +SL+++
Sbjct: 163 LNPLERFCG---DTFVLATVVGACTNLGALDCGKQIHARI--VVDEVEFDSVLGSSLVNL 217
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSS-------------------------------WTSMI 297
YGKCG +D A V + +P+ S W SMI
Sbjct: 218 YGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMI 277
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY AN A EAL+ F+ MR G++ ++ TF VLSAC G + +G ++ +VY++
Sbjct: 278 SGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQG---IQVHAHVYKV 334
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 206/336 (61%), Gaps = 2/336 (0%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD + +L + G +H+ ++ GL ++ +G IS+YSK GD E +
Sbjct: 403 PDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSL 462
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F E E++L SWN++I+ Q GR +A+++F ++ G PD +T+ S+ + C +G L
Sbjct: 463 FSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFL 522
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H YV +++ + + +L+DMY KCGR++ A +VF I +P +++W +MI
Sbjct: 523 QFGERLHNYV--LRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMIS 580
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G + AL C+ M+E G++P+ +TF+GVLSAC HGG V EGK +F M+ + +
Sbjct: 581 GYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMI 640
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P H CMVDLL RAG LEEA V+ M ++ + IWG L+ +C +K+GE +AK
Sbjct: 641 PGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKR 700
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L L+ +S G YV++SN+YAS+G W++V R+R +MK
Sbjct: 701 LLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMK 736
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 145/339 (42%), Gaps = 52/339 (15%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLA 147
WN +I Y+R AL++++ M R G P C + L SC + G+ +H
Sbjct: 227 WNALICGYSRNGYDYDALEVFVQMLREG-FPPCQRTLVGLVPSCGRPDIIFQGKAIHGFG 285
Query: 148 VRLGLESNEFCESGFISLYSK--------------------------------------- 168
++ GL+ + ++ S+Y+K
Sbjct: 286 IKSGLDLDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTII 345
Query: 169 ------AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
G+ E A +++ P+R L S A+I+G ++ G ++ F + + +PD
Sbjct: 346 MCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDA 405
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
V MVS+ + L +H Y +K+ +D L++N LI MY K G ++ + +F
Sbjct: 406 VAMVSILHGFTDPTFIGSGLGIHAY--GLKTGLCADCLVVNGLISMYSKFGDIETVFSLF 463
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
E+ + + SW S+I G ++A++ F MR G P+ +T +L+ C G +Q
Sbjct: 464 SEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQ 523
Query: 343 EGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
G+ +++N +E +VD+ + G LE A
Sbjct: 524 FGERLHNYVLRNNLDMEDFLET--ALVDMYIKCGRLESA 560
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 29/255 (11%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+ + + G + + F+ Y K G A+ +F+E P R + SWNA+I G S++G
Sbjct: 179 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 238
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A+++F+ + + GF P T+V + +CG + +H F +KS D +
Sbjct: 239 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHG--FGIKSGLDLDCRV 296
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L MY K SW +MI Y NGL +EA+ F M++ +
Sbjct: 297 KNALTSMYAK-------------------FSWNTMIGAYGQNGLFDEAMLVFKQMQKERV 337
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
N+VT ++ + G ++ + +M +N+ + + Y G GL+ E
Sbjct: 338 EVNYVTI--IMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEK----GNMGLVVE 391
Query: 380 ARAMVEGMPMKANVV 394
+ + MK + V
Sbjct: 392 CFTQMLQLKMKPDAV 406
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ A++++ M G PD T+ +L ++ L+ G +LH+ +
Sbjct: 474 WNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVL 533
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L+ +F E+ + +Y K G E A +VF E L +WN +I+G G A+
Sbjct: 534 RNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALS 593
Query: 209 MFIGLKKCGFEPDDVTMVSVTSAC 232
+ +++ G +PD +T + V SAC
Sbjct: 594 CYSEMQEQGLKPDRITFLGVLSAC 617
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 224/377 (59%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + E K+AL+ + M G+ PD L + A + A+ G Q+H+
Sbjct: 414 WTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ++ +G + LY++ G ++A F+ ++ +WN +I+G +Q G +EA+
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + + T VS SA +L D++ Q+H V +K+ S+T + N+LI +
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARV--IKTGYTSETEISNALISL 591
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ A F+E+ + N SW ++I + +G EALD F M++ G++P+ VTF
Sbjct: 592 YGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTF 651
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL+AC H G V+EG +F+ M N + I PR HY C+VD+LGRAG L+ A+ VE MP
Sbjct: 652 VGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMP 711
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ A+ ++W L+ AC+ N+++GE+ AKHL ELEP +YV+LSN YA G W ++
Sbjct: 712 IPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQ 771
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K P S
Sbjct: 772 IRKIMKDRGVRKEPGRS 788
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 167/320 (52%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y +++ K+ DI+ M AGV P+ +T P +L+ + +G Q+HSL +
Sbjct: 313 WNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTI 372
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +S+ + I +YSK G +KA+++ D E+ + SW ++IAG Q KEA++
Sbjct: 373 KNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALE 432
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ CG PD++ + S SAC + + Q+H V+ S +D + N L+ +
Sbjct: 433 TFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYV--SGYSADVSIWNGLVYL 490
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG A+ F I+ +W +I G+A +GL EAL F M ++G + N TF
Sbjct: 491 YARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTF 550
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V +SA + +++GK ++K Y E ++ ++ L G+ G +E+A+ M
Sbjct: 551 VSSISASANLADIKQGKQIHARVIKTGYTSETEISN--ALISLYGKCGSIEDAKMDFFEM 608
Query: 388 PMKANVVIWGCLMGACEKFG 407
K N V W ++ C + G
Sbjct: 609 T-KRNEVSWNTIITCCSQHG 627
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 173/340 (50%), Gaps = 6/340 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + ++A+ +Y M R+GV+P Y L +L A + ++GR +H
Sbjct: 111 WVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVY 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S F + ISLY + F A +VF + ++N +I+G +Q G A+
Sbjct: 171 KQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALG 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD VT+ S+ +AC ++GDL Q+H Y+ +K+ D +M SL+D+
Sbjct: 231 IFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYL--LKAGMSLDYIMEGSLLDL 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G ++ A ++F D+ NV W M+V Y ++ D F+ M +G+RPN T+
Sbjct: 289 YVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTY 348
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+L C H G++ G+ + +KN +Q + + G ++D+ + G L++A+ +++ M
Sbjct: 349 PCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS--GVLIDMYSKYGWLDKAQRILD-M 405
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ +VV W ++ + K K +Q W D
Sbjct: 406 IEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 5/323 (1%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
ML+ S F N +I + + +AL I+ M +G+ PD T+ +L A + L
Sbjct: 204 MLYCDSVTF--NTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLR 261
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G+QLHS ++ G+ + E + LY K+GD E+A ++FD + WN ++
Sbjct: 262 KGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYG 321
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q ++ D+F + G P+ T + C G++ L Q+H +K+ +SD
Sbjct: 322 QIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHS--LTIKNGFQSD 379
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ LIDMY K G +D A ++ I++ +V SWTSMI GY + EAL+ F M+
Sbjct: 380 MYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQA 439
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
GI P+++ +SAC V +G + V + + +V L R G+ +
Sbjct: 440 CGIWPDNIGLASAISACAGIKAVHQGSQIHARVY-VSGYSADVSIWNGLVYLYARCGISK 498
Query: 379 EARAMVEGMPMKANVVIWGCLMG 401
EA + E + K + G + G
Sbjct: 499 EAFSSFEAIEHKEGITWNGLISG 521
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 42/354 (11%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H+ A+ GL + I LY+K G +AR+VF+E R SW A+++G +Q+G
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+EA+ ++ + + G P + S+ SAC +L +H V+ K S+T +
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVY--KQGFFSETFV 180
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+LI +Y +C LA +VF ++ + ++ ++I G+A G + AL F M+ SG+
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGL 240
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P+ VT +L+AC G +++GK + + + G ++DL ++G +EEA
Sbjct: 241 SPDSVTIASLLAACSAVGDLRKGKQLHSYLLKA-GMSLDYIMEGSLLDLYVKSGDIEEAL 299
Query: 382 AMVEGMPMKANVVIWG-----------------------------------CLMGACEKF 406
+ + + NVV+W C++ C
Sbjct: 300 QIFDSGD-RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL 458
G + +GE + L + YV VL ++Y+ G ++ +RI +++ +++
Sbjct: 359 GEIGLGEQI-HSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDV 411
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 264 bits (674), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 216/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I T+ E K+AL ++ M G LPD +TL VL+ L +L G+++H+ +
Sbjct: 162 WNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLL 221
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E + S +Y K+G K+ P R + +WN +IAG +Q+G +E ++
Sbjct: 222 KCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLN 281
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ +K GF PD +T VSV SAC L L Q+H V +K+ S +++SLI M
Sbjct: 282 QYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEV--IKAGASSVLAVVSSLISM 339
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + G ++ + K F + + +V W+SMI Y +G EAL+ FH M + + N VTF
Sbjct: 340 YSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTF 399
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC H G ++G +F++M Y+++PR HY C+VDLLGRAG LEEA M+ MP
Sbjct: 400 LSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMP 459
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + +IW L+ AC+ +M E +++ + +L+P +YV+LSNI+AS W V +
Sbjct: 460 VQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQ 519
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ R++ K P S
Sbjct: 520 IRKAMRDRSVRKEPGIS 536
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 176/370 (47%), Gaps = 47/370 (12%)
Query: 67 LNQIYAHIIRT-HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
LN +Y+ +R+ M S SA+ + R+ K+A D + + + D
Sbjct: 14 LNPLYSFTVRSLSMKISSSASLQEFTSLCNDGRI---KQAYDTFT----SEIWSDPSLFS 66
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG--------------- 170
+L++ +L +L G+Q+HSL + G ++F + ++ YSK G
Sbjct: 67 HLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRR 126
Query: 171 ----------------DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
D E A+K+FDE ER + +WNA+IAGL+Q K+A+ +F +
Sbjct: 127 NVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMY 186
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
GF PD+ T+ SV C L L +VH + +K + +++ +SL MY K G
Sbjct: 187 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACL--LKCGFELSSVVGSSLAHMYIKSGS 244
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ K+ + V +W ++I G A NG E L+ ++ M+ +G RP+ +TFV VLSA
Sbjct: 245 LSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSA 304
Query: 335 CVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKAN 392
C + +G+ E++K A ++ + R+G LE++ +A V+ +
Sbjct: 305 CSELATLGQGQQIHAEVIK--AGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENF--D 360
Query: 393 VVIWGCLMGA 402
VV+W ++ A
Sbjct: 361 VVLWSSMIAA 370
>gi|125563703|gb|EAZ09083.1| hypothetical protein OsI_31349 [Oryza sativa Indica Group]
Length = 503
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 217/371 (58%), Gaps = 10/371 (2%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF--ALEIGRQLHSLAVRLGLESNE-FC 158
P A +++ + R G+ PD +TLP VLKA +L +L + +HS AV+ GL S +
Sbjct: 85 PSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSEAVKDGLASAVVYV 144
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+ ++ YS G E+A +VFDE P R + SWN + + +G + +++F + + G
Sbjct: 145 PNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGHHELCVELFAEMLEAGS 204
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL-IDMYGKCGRMDL 277
PD T V + SA LG+L L H QV S++ TL L + ++MY KCG +
Sbjct: 205 VPDPTTFVVMLSAAAELGNLALGKWAHG---QVVSRRLDMTLQLGTAAVNMYSKCGAVSY 261
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F + NV +WT+MIVG+A NGLA EAL+ F M+ S I PN+VTF+G+L AC H
Sbjct: 262 ALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSH 321
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V EG+ FF M++VY I P HY MVD+LGR GLL+EA V GMP++A+ V+W
Sbjct: 322 AGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEADPVVWR 381
Query: 398 CLMGACEKFGN---VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L+ AC+ + +++ + V L ELEP G YV++SNIY G W+E + R VM+
Sbjct: 382 TLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKARRVMR 441
Query: 455 HRNLAKIPAYS 465
+ K+ S
Sbjct: 442 EGGMKKVAGES 452
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 220/377 (58%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + A+ + M G LP+ T VL A ++ + G+++H+ ++
Sbjct: 212 WNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSI 271
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G + F + +Y+K+G + AR VFD + ++ S+N +I G SQ E++
Sbjct: 272 HMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEV-SYNILIVGHSQTSDCSESLS 330
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G + D+V+ + SAC +L ++ ++H F ++ + NSL+D
Sbjct: 331 LFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHG--FLLRKLFHIHLFVANSLLDF 388
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+ LA +F + +V+SW +MI+GY G + A+D F MR+ + + V+F
Sbjct: 389 YTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSF 448
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC HGG +++G+ +F+ +K IEP HY CMVDLLGRAGL+EEA +++G+P
Sbjct: 449 IAVLSACSHGGLLEKGRKYFDELK-ARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLP 507
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + IWG L+GAC +GN+++ W A+HL EL+P G Y +LSN+YA G W+E R
Sbjct: 508 IVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANR 567
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K P S
Sbjct: 568 IRELMKSRGVKKSPGCS 584
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 149/293 (50%), Gaps = 14/293 (4%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+H + AF WN +IR Y+ + L++Y M R GV PD +T P VLKA F +
Sbjct: 1 MHHRTTAFLWNTLIRGYS-IAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRK 59
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
GR++H V+LG ES+ F + +S Y G A +VFDE PE+ L SWN +I S
Sbjct: 60 GREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSV 119
Query: 200 DG-RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+G ++A+DMF + G +P+ +T+ S L + +VH ++ +SD
Sbjct: 120 NGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGS--SIRMGLESD 177
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ NSLIDMY K G A VF+++D NV SW +MI +A N A+ M++
Sbjct: 178 IFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQD 237
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
G PN VTF VL AC G V+ GK +I R H GC DL
Sbjct: 238 YGELPNSVTFTNVLPACARMGLVRPGK----------EIHARSIHMGCAFDLF 280
>gi|296081589|emb|CBI20594.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 237/429 (55%), Gaps = 25/429 (5%)
Query: 49 DPAKIVATQLSKCT---NLLQLNQIYAHIIRTHM------LHSYSAAFHWNNIIRLYTRL 99
DP I + C N+ Q I+AH+ ++ L + + HW + I+ +
Sbjct: 22 DPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKALAQNSHWFHAIQFFNHQ 81
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
+ A + PD +T VLKA L + G+++H++ + G ESN F
Sbjct: 82 VSSPNAPN-----------PDEFTFTSVLKACAGLAHVVNGQKIHAMVTKQGFESNLFVR 130
Query: 160 SGFISLYSKAGDFEKARKVFDEN--PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
+ I +Y KAG AR +FDE +R + WNA+IAG +Q+ + +AI++F +++ G
Sbjct: 131 NSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVFRMMQQFG 190
Query: 218 -FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P+DVT+VSV AC LG L+L + ++ + + + N+L DMY KCG +
Sbjct: 191 GVVPNDVTLVSVLPACAHLGALDLGKWIDGFI--SRREMALGLFLGNALADMYAKCGCIT 248
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A +VF ++++ +V SW+ +I G A G A+EA CF+ M + G +PN V F+G+L+AC
Sbjct: 249 EARRVFNKMEERDVISWSIIICGLAMYGHADEAFGCFYEMLDCGEKPNDVVFMGLLTACT 308
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G V++G + F M Y + P+ HYGC+VDLL RAG L++A M+ MPMK NV+IW
Sbjct: 309 HAGLVKKGLNCFNTMDKEYGVSPKVEHYGCVVDLLSRAGELDKAEDMISSMPMKPNVIIW 368
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+G C + + G+ V +H+ EL+ G+YV L+N+Y+S G ++ + R M+
Sbjct: 369 GALLGGCRIYRDSGRGQRVVQHILELDSDHSGSYVYLANVYSSMGRLDDAAKCRLRMREN 428
Query: 457 NLAKIPAYS 465
+ K P S
Sbjct: 429 GVLKTPGCS 437
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 43/260 (16%)
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
L +Q + S L+ LI + A +F + PN+ + + +
Sbjct: 5 LQIQAQLITSPIPSSVVDPNLIAVKLIGACADHANVRQAALIFAHLASPNIFAHNATLKA 64
Query: 300 YAANGLANEALDCFHYMRESGIRPN--HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A N A+ F++ S PN TF VL AC V G+ M+
Sbjct: 65 LAQNSHWFHAIQFFNHQVSSPNAPNPDEFTFTSVLKACAGLAHVVNGQKIHAMVTK-QGF 123
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK-ANVVIWGCLMG--------------- 401
E ++D+ +AG L AR + + M ++ NVV W ++
Sbjct: 124 ESNLFVRNSLIDMYFKAGYLLLARHLFDEMFVRDRNVVCWNAMIAGYAQNEKYSDAIEVF 183
Query: 402 ---------------------ACEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYA 438
AC G + +G+W+ + E + G ++ L+++YA
Sbjct: 184 RMMQQFGGVVPNDVTLVSVLPACAHLGALDLGKWIDGFISRRE-MALGLFLGNALADMYA 242
Query: 439 SRGLWEEVERIRAVMKHRNL 458
G E R+ M+ R++
Sbjct: 243 KCGCITEARRVFNKMEERDV 262
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 210/383 (54%), Gaps = 14/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W + YT ++A+D++ M GV PD Y + VL A + L+ G +
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ N F + ++LY+K G EKAR VFD E+ + +W+ +I G + + KE I+
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA------LQVHKYVFQVKSKQKSDTLML 262
+F+ + + +PD ++V S+C SLG L+L + H+++ ++ M
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL--------TNLFMA 351
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LIDMY KCG M ++VF E+ + ++ + I G A NG + F + GI
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ TF+G+L CVH G +Q+G FF + VY ++ HYGCMVDL GRAG+L++A
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MPM+ N ++WG L+ C + ++ E V K L LEPW+ G YV LSNIY+ G
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+E +R +M + + KIP YS
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYS 554
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 192/359 (53%), Gaps = 6/359 (1%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
Y++++ +H + F +N++I + + LD+++ + + G+ +T P+VLKA
Sbjct: 63 YSYLLFSHT--QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+ + ++G LHSL V+ G + + +S+YS +G A K+FDE P+R + +W
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
A+ +G + GR +EAID+F + + G +PD +V V SAC +GDL+ + KY+ +
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++ ++ S + +L+++Y KCG+M+ A VF + + ++ +W++MI GYA+N E +
Sbjct: 241 MEMQKNS--FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F M + ++P+ + VG LS+C G + G+ ++ ++ ++D+
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDM 357
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+ G + + + M K ++VI + K G+VK+ V ++L DG+
Sbjct: 358 YAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/383 (39%), Positives = 218/383 (56%), Gaps = 8/383 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR Y R + A+++Y M G + PD +T P VLKA L L GR++H
Sbjct: 131 FLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREVHD 190
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R ++ F +G I +Y+K G ++A VFD R WN++IA Q+GR E
Sbjct: 191 RVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAE 250
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ--VKSKQKSDTLMLN 263
A+ + + G P VT+VS SA G L ++H Y ++ S+ K T
Sbjct: 251 ALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLKT---- 306
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
SL+DMY K G + +A +F ++ + SW +MI G+ +G A+ A + F MR E+ +
Sbjct: 307 SLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNEAQVM 366
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+TFVGVLSAC HGG VQE K F++M VY I+P HY C+VD+LG +G +EA
Sbjct: 367 PDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLGHSGRFKEASD 426
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+++GM +K + IWG L+ C+ NV++ E L ELEP G YV+LSNIYA G
Sbjct: 427 VIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVLLSNIYAQSGK 486
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WEE R+R +M +R L KI A S
Sbjct: 487 WEEAARVRKLMTNRGLKKIIACS 509
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER- 185
+L++ A+ GRQLH+ + GL + + + LY+ G AR++FDE P +
Sbjct: 69 ILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDEMPNQG 128
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQV 244
+ WN +I ++DG + AI+++ + CG EPD+ T V AC +L DL +V
Sbjct: 129 NVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLGAGREV 188
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H V +++ +D + LIDMY KCG +D A+ VF + W SMI NG
Sbjct: 189 HDRV--MRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNG 246
Query: 305 LANEALDCFHYMRESGIRPNHVTFV 329
EAL M GI P VT V
Sbjct: 247 RPAEALALCRNMAAEGIAPTIVTLV 271
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 216/384 (56%), Gaps = 7/384 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + A+ +++ R V P+ T +L A +L L +G+ +H L
Sbjct: 253 WTGLISGYMKAGLFNDAVALFL---RMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVS 309
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + +Y K A+++FDE PE+ + SW ++I+GL Q +E++D
Sbjct: 310 KYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLD 369
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + GFEPD V + SV SAC SLG L+ VH+Y+ S+ K D + SLIDM
Sbjct: 370 LFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDH--SRIKWDVHIGTSLIDM 427
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +++A ++F + N+ +W + I G A NG EAL F Y+ ESG RPN +TF
Sbjct: 428 YAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITF 487
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ V SAC H G V EG+ +F+ M + Y + P HYGCMVDLL RA L+EEA ++ M
Sbjct: 488 LAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKM 547
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM +V I G L+ A +GNV++ + K ++ E G YV+LSN YA+ W EV
Sbjct: 548 PMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVR 607
Query: 448 RIRAVMKHRNLAKIPAYSLATRLD 471
+R +MK + ++K P SL R+D
Sbjct: 608 SVRRLMKEKGISKAPGSSL-IRVD 630
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 37/375 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLH-----------------------SYSAAFHW----- 89
+ +C +L QI+A ++R+ ++ ++ F W
Sbjct: 91 IQRCNDLRSFKQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDWSFSSF 150
Query: 90 --NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N II Y P A+ IY ++ G +PD YT+P VLK+ + + +Q+H+LA
Sbjct: 151 PCNLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLA 210
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ L + F ++ F+ +YS GD A KVFD P R + SW +I+G + G +A+
Sbjct: 211 VKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAV 270
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ + P+ T VS+ ACG LG L L +H V K + ++ N+L+D
Sbjct: 271 ALFL---RMDVAPNAATFVSILGACGKLGCLNLGKGIHGLV--SKYPHGKELVVSNTLMD 325
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KC + A ++F EI + ++ SWTSMI G E+LD F+ M SG P+ V
Sbjct: 326 MYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVI 385
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VLSAC G + G+ E + + +I+ ++D+ + G +E A+ M +
Sbjct: 386 LTSVLSACASLGLLDYGRWVHEYIDHS-RIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLL 444
Query: 388 PMKANVVIWGCLMGA 402
P K N+ W +G
Sbjct: 445 PSK-NIRTWNAYIGG 458
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 224/402 (55%), Gaps = 37/402 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ----LFALEIGRQ 142
F +N +IR Y++ +P +++ ++ M R V PD +T +LK + L + +
Sbjct: 248 FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDE 307
Query: 143 LHSLAVRLGLESNEFCESGFISLYS-------------------------------KAGD 171
+H ++LG + F + I LY+ +AG+
Sbjct: 308 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 367
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
E AR+VF E PER + SW +++G +Q R++EA+++F ++ G PD+V MVSV SA
Sbjct: 368 LELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISA 427
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C SLGDLE +VH+Y+ + + N+LIDMY KCG MDLA++VF +++ ++
Sbjct: 428 CTSLGDLETGFEVHRYIDENGFGWMVS--LCNALIDMYAKCGCMDLAWQVFNNMERKSLI 485
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+W SMI A +G A +A F M SGIRP+ VTF+ +L+A H G V +G FE M
Sbjct: 486 TWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESM 545
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ Y +E HYGCMVD+LGRAG LEEA ++ M M N V+WG L+ AC +G+V+M
Sbjct: 546 QRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEM 605
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
GE V K L EL+P G Y++L +IY + G E +R M
Sbjct: 606 GERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAM 647
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 52/348 (14%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
K L YI +LP +L + +A + AL++ +H+LA R L + +
Sbjct: 165 KTLKSYISNKVMHMLPTSQSLASMAEACLTMQALKL---IHALAFRANLHHHALVLAKIF 221
Query: 164 SL--YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
S G A ++F + + +N +I G S+ +++ +F +++ +PD
Sbjct: 222 RFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPD 281
Query: 222 DVTMVSVTSACGSLG-DLELAL---QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
T + + DL L + ++H V ++ ++N+LI +Y G
Sbjct: 282 GFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFC--FHLFVMNALIHLYAARGVPAA 339
Query: 278 AYKVFWEIDQPNVSSWTSMIV-------------------------------GYAANGLA 306
A++VF E+ +V SW+ ++V GYA +
Sbjct: 340 AHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAKRS 399
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY-- 364
EAL+ F MR+ G+RP+ V V V+SAC G ++ G FE+ + Y E F
Sbjct: 400 REALELFREMRDVGVRPDEVAMVSVISACTSLGDLETG---FEVHR--YIDENGFGWMVS 454
Query: 365 --GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++D+ + G ++ A + M K+ ++ W ++ AC GN +
Sbjct: 455 LCNALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSMISACANHGNAE 501
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+S+Y++A + ++F E + ++ + + G+ D + + +I K P
Sbjct: 125 VSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYD--KYKTLKSYISNKVMHMLPTS 182
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
++ S+ AC ++ L+L +H F+ + L G + A ++F
Sbjct: 183 QSLASMAEACLTMQALKL---IHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLF 239
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL---------- 332
+I QPN + ++I GY+ + ++++ F+ MR + + P+ TF +L
Sbjct: 240 SQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDL 299
Query: 333 -----SACVHGGKVQEG--KHFFEMMKNVYQIEPR---FAHYGCMVDLLG---------- 372
S +HG ++ G H F M ++ R A + +++G
Sbjct: 300 PLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLV 359
Query: 373 ----RAGLLEEARAMVEGMPMKANVVIWGCLM 400
RAG LE AR + MP + +VV W ++
Sbjct: 360 VAHVRAGELELARQVFYEMPER-DVVSWTVMV 390
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 218/380 (57%), Gaps = 6/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I Y+ K ++ + +S G P+ T ++ A + E GR +H L
Sbjct: 100 WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGL 159
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G+ + FI+ Y K GD + K+F++ + L SWN +I Q+G A++
Sbjct: 160 VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG 219
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV-FQVKSKQKSDTLMLNSL 265
+ F ++ G EPD T ++V +C +G + LA +H + F S K T +L
Sbjct: 220 LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT---TAL 276
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+D+Y K GR++ + VF EI P+ +WT+M+ YA +G +A+ F M GI P+H
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +L+AC H G V+EGKH+FE M Y+I+PR HY CMVDLLGR+GLL++A +++
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + +WG L+GAC + + ++G A+ L ELEP YV+LSNIY++ GLW++
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 446 VERIRAVMKHRNLAKIPAYS 465
RIR +MK + L + S
Sbjct: 457 ASRIRNLMKQKGLVRASGCS 476
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 158/348 (45%), Gaps = 32/348 (9%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
++E+ R LH V+ + F + Y + G A K+FDE PER L SWN++I+
Sbjct: 46 SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLIS 105
Query: 196 GLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
G S G + ++ + + + GF P++VT +S+ SAC G E +H V +
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ + ++N+ I+ YGK G + + K+F ++ N+ SW +MIV + NGLA + L F
Sbjct: 166 LE--EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQ--EGKHFFEMMKNVYQIEPRFAHYGC----M 367
+ R G P+ TF+ VL +C G V+ +G H M F+ C +
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG-------FSGNKCITTAL 276
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+DL + G LE++ + + + + W ++ A G G KH + + +
Sbjct: 277 LDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG---FGRDAIKHFELMVHYGI 332
Query: 428 G----AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
+ L N + GL EE + M R Y + RLD
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR-------YRIDPRLD 373
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 220/377 (58%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I ++TR P++AL +++ M G++PD Y+L L A + ++G Q+H +
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G N+F ++ I +Y+K G A K+F++ E+ L +WN++I G SQ+G + EAI
Sbjct: 432 KTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAIT 490
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + D +T +SV AC LG LE VH + + + D+ + +L DM
Sbjct: 491 LFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKL--IMYGLRKDSYLDTALTDM 548
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A+ VF + + ++ SW+ MI GY +G N + F+ M SGI+PN +TF
Sbjct: 549 YSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITF 608
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +LSAC H G V+EGK +F M + +EP+ H+ CMVDLL RAG L A ++ +P
Sbjct: 609 MHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLP 667
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN IWG L+ C + + + + K+L +++ G Y +LSNIYA G W++ +
Sbjct: 668 FPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGK 727
Query: 449 IRAVMKHRNLAKIPAYS 465
+R++MK + L K+P YS
Sbjct: 728 VRSMMKSKGLRKVPGYS 744
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 183/382 (47%), Gaps = 42/382 (10%)
Query: 60 KCTNLLQLNQIYAHII----------RTHMLHSYSA------------------AFHWNN 91
+C L Q++AH+ T ++ SY+ +F W
Sbjct: 10 RCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGV 69
Query: 92 IIRLYTRLEAPKKALDIY---IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+I+ Y ++A+ +Y ++ + + + P VLKA L +G ++H +
Sbjct: 70 LIKCYVWGGFFEEAVSLYHEMVYQDQTQI--SNFVFPSVLKACSGFGDLSVGGKVHGRVI 127
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ E+ + +Y + + A K FD P R + +W++I+ Q+G+A E +D
Sbjct: 128 KCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLD 187
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + EPD VTM+SVT AC LG L L VH YV V+ + +S+ + NSLI M
Sbjct: 188 MFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYV--VRREIESNASLNNSLIVM 245
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGK G + A ++F + + WT MI Y +G EAL+ F M+E + PN VT
Sbjct: 246 YGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTM 305
Query: 329 VGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVE 385
VGVL AC G+V+EG+ H F + + ++P G +++L G L + + E
Sbjct: 306 VGVLCACARLGRVKEGRSVHGFVIRR---AMDPELDFLGPALMELYADTGNLRDCHKVFE 362
Query: 386 GMPMKANVVIWGCLMGACEKFG 407
+ K ++ W L+ + G
Sbjct: 363 TIKEKT-ILSWNTLISIFTRNG 383
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 157/323 (48%), Gaps = 26/323 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W++I+ + + + LD++ M V PD T+ V +A +L +L +GR +H V
Sbjct: 169 WSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVV 228
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +ESN + I +Y K GD A ++F+ P R W +I+ +Q G +EA++
Sbjct: 229 RREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALN 288
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ EP+ VTMV V AC LG ++ VH +V + + D L +L+++
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG-PALMEL 347
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y G + +KVF I + + SW ++I + NG EAL F M+ G+ P+ +
Sbjct: 348 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 407
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
LSAC +HG ++ G +F + ++N ++D+ + G +
Sbjct: 408 ASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNA------------LIDMYAKCGFV 454
Query: 378 EEARAMVEGMPMKANVVIWGCLM 400
A M E + K+ +V W ++
Sbjct: 455 HSANKMFEKIKEKS-LVTWNSMI 476
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 222/383 (57%), Gaps = 12/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA----SCQLFALEIGRQLH 144
WN + R T ++ L +Y M+R GV D +T VLKA C L G+++H
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIH 205
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ R G S+ + + + +Y++ G + A VF+ P R + SW+A+IA +++G+A
Sbjct: 206 AHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 205 EAIDMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM- 261
EA+ F + + P+ VTMVSV AC SL LE +H Y+ ++ D+++
Sbjct: 266 EALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYIL----RRGLDSILP 321
Query: 262 -LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+++L+ MYG+CG++D+ +VF + +V SW S+I Y +G +A+ F M +G
Sbjct: 322 VISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANG 381
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P VTFV VL AC H G V+EGK FE M + I+P+ HY CMVDLLGRA L+EA
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEA 441
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
MV+ M + +WG L+G+C GNV++ E ++ L LEP + G YV+L++IYA
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 441 GLWEEVERIRAVMKHRNLAKIPA 463
+W+EV+R++ +++HR L K+P
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPG 524
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 14/275 (5%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+L G ++H + G + + F + I +YS G + ARKVFD+ +R + WNA+
Sbjct: 92 SLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC----GSLGDLELALQVHKYVFQV 251
L+ G +E + ++ + + G E D T V AC + L ++H ++
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHL--T 209
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
+ S ++ +L+DMY + G +D A VF + NV SW++MI YA NG A EAL
Sbjct: 210 RRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALR 269
Query: 312 CFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCM 367
F M PN VT V VL AC +++G+ H + + + + I P + +
Sbjct: 270 TFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVIS---AL 326
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
V + GR G L+ + + + M + +VV W L+ +
Sbjct: 327 VTMYGRCGKLDVGQRVFDRMHDR-DVVSWNSLISS 360
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 248/456 (54%), Gaps = 45/456 (9%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRT----------HMLHSYS-----------------AA 86
+ +L KC NL L Q++A ++ T H+L++ S
Sbjct: 8 ILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTIFNHIPNPTL 67
Query: 87 FHWNNIIRLYTR-LEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
F +N +I T + A +Y ++ + P+ +T P + KA L+ G LH
Sbjct: 68 FLYNTLISSLTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQHGPPLH 127
Query: 145 SLAVR-LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR- 202
+ ++ L + F ++ ++ Y+K G +R +FD+ E L +WN ++A +Q
Sbjct: 128 AHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAYAQSASH 187
Query: 203 ------------AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+ EA+ +F ++ +P++VT+V++ SAC +LG L H YV
Sbjct: 188 VSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYV-- 245
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+++ K + + +L+DMY KCG ++LA ++F E+ + + +MI G+A +G N+AL
Sbjct: 246 LRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQAL 305
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ + M+ + P+ T V + AC HGG V+EG FE MK V+ +EP+ HYGC++DL
Sbjct: 306 ELYRNMKLEDLVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDL 365
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
LGRAG L+EA ++ MPMK N ++W L+GA + GN++MGE KHL ELEP + G Y
Sbjct: 366 LGRAGRLKEAEERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNY 425
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
V+LSN+YAS G W +V+R+R +MK + K+P +SL
Sbjct: 426 VLLSNMYASIGRWNDVKRVRMLMKDHGVDKLPGFSL 461
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 210/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +AL + M R G PD +TL VL + ++ G ++H AV
Sbjct: 139 WNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAV 198
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G +++ F S I +Y+ + + KVFD P R WN+++AG +Q+G +EA+
Sbjct: 199 RNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGSVEEALG 258
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P VT S+ CG+L L Q+H YV ++ + + + +SLIDM
Sbjct: 259 IFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV--IRGGFEDNVFISSSLIDM 316
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A+ +F + P+V SWT+MI+GYA +G A EAL F M +PNH+TF
Sbjct: 317 YCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 376
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G V +G +F+ M + Y I P H + D+LGRAG L+EA + M
Sbjct: 377 LAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFISKMQ 436
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +W L+ AC N + E VAK + ELEP S G++VVLSN+Y++ G W E
Sbjct: 437 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 496
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ + + K PA S
Sbjct: 497 LRKSMRKKGMKKDPACS 513
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 78 HMLHSYSAAFHWNNIIRLYTRLEA---PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
H + +A H+ + I L+ R+ A P+ ++ +LP LK+ L
Sbjct: 19 HQIRMAAAQGHFRDAISLFLRMRACAAPRSSVPA--------------SLPAALKSCAAL 64
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSK-------------------AGDFEKA 175
+G LH+LA+R G ++ F + ++LY K + E
Sbjct: 65 GLSALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESV 124
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKVFDE ER + SWN ++ G +++GR EA+ + + + GF PD T+ SV
Sbjct: 125 RKVFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAEC 184
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
D++ +VH F V++ +D + +SLIDMY C R D + KVF + + W S
Sbjct: 185 ADVKRGSEVHG--FAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNS 242
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
++ G A NG EAL F M ++G+RP VTF ++ C + ++ GK
Sbjct: 243 VLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQL 294
>gi|125605677|gb|EAZ44713.1| hypothetical protein OsJ_29343 [Oryza sativa Japonica Group]
Length = 505
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 217/371 (58%), Gaps = 10/371 (2%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF--ALEIGRQLHSLAVRLGLESNE-FC 158
P A +++ + R G+ PD +TLP VLKA +L +L + +HS AV+ GL S +
Sbjct: 87 PSTAAALFLRLRRGGLRPDAHTLPHVLKALARLAPGSLPVVGSVHSEAVKDGLASAVVYV 146
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+ ++ YS G E+A +VFDE P R + SWN + + +GR + +++F + + G
Sbjct: 147 PNALMAAYSACGQLERAVQVFDEMPRRTVVSWNTALTACAGNGRHELCVELFAEMLEAGS 206
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL-IDMYGKCGRMDL 277
PD T V + SA LG+L L H QV S++ TL L + ++MY KC +
Sbjct: 207 VPDPTTFVVMLSAAAELGNLALGKWAHG---QVVSRRLDMTLQLGTAAVNMYSKCATVSY 263
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F + NV +WT+MIVG+A NGLA EAL+ F M+ S I PN+VTF+G+L AC H
Sbjct: 264 ALRLFERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSH 323
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G V EG+ FF M++VY I P HY MVD+LGR GLL+EA V GMP++A+ V+W
Sbjct: 324 AGLVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAYDFVVGMPVEADPVVWR 383
Query: 398 CLMGACEKFGN---VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L+ AC+ + +++ + V L ELEP G YV++SNIY G W+E + R VM+
Sbjct: 384 TLLAACQLHSSKDCIEIIDKVQGKLLELEPRRSGNYVMVSNIYCEIGSWDEAAKARRVMR 443
Query: 455 HRNLAKIPAYS 465
+ K+ S
Sbjct: 444 EGGMKKVAGES 454
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 12/223 (5%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
S C L + Q++ + R ++ WN + + ++++ M AG +
Sbjct: 155 SACGQLERAVQVFDEMPRRTVVS-------WNTALTACAGNGRHELCVELFAEMLEAGSV 207
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD T ++L A+ +L L +G+ H V L+ + +++YSK A ++
Sbjct: 208 PDPTTFVVMLSAAAELGNLALGKWAHGQVVSRRLDMTLQLGTAAVNMYSKCATVSYALRL 267
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+ P R + +W A+I G +Q+G A+EA+++F +K P+ VT + + AC G
Sbjct: 268 FERMPARNVWTWTAMIVGFAQNGLAQEALELFDRMKLSKIIPNYVTFLGLLCACSHAG-- 325
Query: 239 ELALQVHKYVFQVKSKQKSDTLML--NSLIDMYGKCGRMDLAY 279
L + ++ +++ +M ++++D+ G+ G + AY
Sbjct: 326 -LVDEGRRFFHEMQHVYGIVPMMTHYSAMVDVLGRNGLLQEAY 367
>gi|115471645|ref|NP_001059421.1| Os07g0299800 [Oryza sativa Japonica Group]
gi|34394298|dbj|BAC84780.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610957|dbj|BAF21335.1| Os07g0299800 [Oryza sativa Japonica Group]
Length = 673
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG--DFEKARKVFDENP 183
+ AS ++ + LH+L ++G E N + + Y+K G D E ARKVFD
Sbjct: 202 VAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFD-TM 260
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLGDLELA 241
ER + SWN++IA +Q+G + EAI ++ + G + + V + +V AC G ++
Sbjct: 261 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 320
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
++H V V+ + + + S++DMY KCGR+++A + F +I + N+ SW++MI GY
Sbjct: 321 KRIHNQV--VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 378
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+G EAL+ F M+ SG+RPN++TF+ VL+AC H G + EG++++ MK + IE
Sbjct: 379 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 438
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
HYGCMVDLLGRAG L+EA ++++ M +K + IWG L+ AC NV++ E K L E
Sbjct: 439 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 498
Query: 422 LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L+ + G YV+LSNIYA +W++VERIR ++K R + K P YS
Sbjct: 499 LDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYS 542
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I LY + +A+ +Y M G+ + L VL A A++ G+++H+
Sbjct: 267 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 326
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
VR+GLE N + + + +YSK G E A + F + E+ + SW+A+I G GR +EA
Sbjct: 327 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 386
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLN 263
+++F +K+ G P+ +T +SV +AC G L+ +Y + ++ ++
Sbjct: 387 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG----RYWYNAMKQEFGIEAGVEHYG 442
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G +D AY + E+ +P+ + W +++
Sbjct: 443 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 477
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 12/266 (4%)
Query: 142 QLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
QLH LA+R GL S+ + S + +Y AR+ FDE P+ A+ +G ++
Sbjct: 114 QLHLLALRSGLFPSDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRN 173
Query: 201 GRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
++++F + D+ + SA + D + +H + ++ ++ +
Sbjct: 174 NLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAG 233
Query: 259 TLMLNSLIDMYGKCGRMDL--AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
++N+++D Y K G DL A KVF +++ +V SW SMI YA NG++ EA+ + M
Sbjct: 234 --VVNTMLDSYAKGGSRDLEVARKVFDTMER-DVVSWNSMIALYAQNGMSAEAIGLYSKM 290
Query: 317 RE--SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
GI+ N V VL AC H G +Q GK + + +E +VD+ +
Sbjct: 291 LNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQVVRM-GLEENVYVGTSIVDMYSKC 349
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLM 400
G +E A + K N++ W ++
Sbjct: 350 GRVEMASRAFRKIKEK-NILSWSAMI 374
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 94/257 (36%), Gaps = 45/257 (17%)
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
SD ++L+ MY C R A + F EI PN T+M GY N L +L+ F M
Sbjct: 127 SDPYSASALLHMYHHCSRPMDARRAFDEIPDPNPVIVTAMASGYVRNNLVYHSLELFRAM 186
Query: 317 RES------------------------GIRPNHVTFVGVLSACVHGGKVQE--------G 344
S G+ + + + + G V G
Sbjct: 187 IASDSASVVDEAAALVAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGG 246
Query: 345 KHFFEMMKNVYQ-IEPRFAHYGCMVDLLGRAGLLEEARAMVEGM-----PMKANVVIWGC 398
E+ + V+ +E + M+ L + G+ EA + M +K N V
Sbjct: 247 SRDLEVARKVFDTMERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSA 306
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS--NIYASRGLWEEVERIRAVMKHR 456
++ AC G ++ G+ + + + + YV S ++Y+ G E R +K +
Sbjct: 307 VLLACAHAGAIQTGKRIHNQVVRMG-LEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEK 365
Query: 457 NL----AKIPAYSLATR 469
N+ A I Y + R
Sbjct: 366 NILSWSAMITGYGMHGR 382
>gi|218189919|gb|EEC72346.1| hypothetical protein OsI_05579 [Oryza sativa Indica Group]
Length = 545
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 216/408 (52%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+ +++ L+ +L+ KA+ ++ +G PD + L AS L IG +H L
Sbjct: 87 FTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIF 146
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
R GL+S + + +Y + G FE AR VFD
Sbjct: 147 RCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALS 206
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ P + SW A+I G QD + +A+++F + G P+ +T+V V SAC +G
Sbjct: 207 FFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGA 266
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L +H Y KS ++ ++ N+L+DMY K G + A+ VF E+ + +WT+MI
Sbjct: 267 LDLGRAIHGY--GSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMI 324
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+ G +A++ F M SGI PN VTFV VLSAC H G +QEG+ F+ M+ VY I
Sbjct: 325 SSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHI 384
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+PR HYGCMVDLLGR GLLEEA A+++ M ++ ++VIW L+ AC GN ++ E K
Sbjct: 385 DPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGK 444
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + EP DG YV+L N+YA W+E +R M R + K P S
Sbjct: 445 EIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCS 492
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 40/302 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFI-SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+++H+ A+ GL N+ S I Y++ G A ++FDE P + S+ ++++ +
Sbjct: 37 QRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLK 96
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+AI +F G PD V SA G LGD + VH +F + S+
Sbjct: 97 LDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIF--RCGLDSEL 154
Query: 260 LMLNSLIDMYGKCGR-------------------------------MDLAYKVFWEIDQP 288
++ N+L+DMY +CG+ +D A F+++
Sbjct: 155 VVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMK 214
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--H 346
+ SWT++I G+ + +AL+ F M G RPNH+T VGVLSAC G + G+ H
Sbjct: 215 STVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIH 274
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+ N ++D+ ++G + A ++ E + MK + W ++ +
Sbjct: 275 GYGSKSNA---TTNIIVTNALMDMYAKSGSIASAFSVFEEVQMK-DAFTWTTMISSFTVQ 330
Query: 407 GN 408
GN
Sbjct: 331 GN 332
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 206/349 (59%), Gaps = 6/349 (1%)
Query: 121 CYTLPI----VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
C+ P L+A L L +G+QLH+L + GL ++ + +S+Y+KAG ++A
Sbjct: 331 CFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQAT 390
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+FD+ + S++A+++G Q+G+A EA +F ++ C +PD TMVS+ AC L
Sbjct: 391 TLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLA 450
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ H V + S+T + N+LIDMY KCGR+DL+ ++F + ++ SW +M
Sbjct: 451 ALQHGKCGHGSV--IVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTM 508
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY +GL EA F M+ P+ VTF+ ++SAC H G V EGK +F MM + Y
Sbjct: 509 IAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYG 568
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I PR HY MVDLL R G L+EA ++GMP+KA+V +WG L+GAC N+ +G+ V+
Sbjct: 569 ITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVS 628
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+Q+L P G +V+LSNI+++ G ++E +R + K + K P S
Sbjct: 629 SMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCS 677
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 10/349 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y+ R P+ YT P VLKA L L R +H A
Sbjct: 97 YNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAA 156
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL ++ F + + +Y+K F A VF P R + +WNA++AG + G+ + I
Sbjct: 157 RAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIA 216
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS--KQKSDTLMLNSLI 266
+ L + P+ T+V++ G L VH Y + S K L+ +L+
Sbjct: 217 CLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALL 275
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG---IRP 323
DMY KCG + A +VF + N +W++++ G+ G EA F M G + P
Sbjct: 276 DMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP 335
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
V L AC + + GK ++ + ++ + +AGL+++A +
Sbjct: 336 TSVA--SALRACANLSDLCLGKQLHALLAK-SGLHTDLTAGNSLLSMYAKAGLIDQATTL 392
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVV 432
+ M +K + V + L+ + G V + +Q D A +V
Sbjct: 393 FDQMVVK-DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMV 440
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 7/235 (2%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
GD AR +FD+ P + +NA+I S G A ++ +P++ T V
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC +L DL A VH + ++ +D + +L+D+Y KC A VF + +
Sbjct: 137 KACSALLDLRSARAVHCHA--ARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARD 194
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HF 347
V +W +M+ GYA +G ++ + C M++ PN T V +L G + +G+ H
Sbjct: 195 VVAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVHA 253
Query: 348 FEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ + G ++D+ + G L A + E M ++ N V W L+G
Sbjct: 254 YSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALVG 307
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/387 (37%), Positives = 211/387 (54%), Gaps = 3/387 (0%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H +F ++++ R P A+ Y + A + +T V KA L AL G
Sbjct: 65 HPAPDSFLFSSLTRTAAHHGLPVAAIAFYRGLLSAALPFSSFTFTAVAKACADLSALRTG 124
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H+ ++ LG S+ F + + LYSK G ARK+FD +R + +WNA+I+G Q+
Sbjct: 125 AAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLFDAIRDRSVVAWNAMISGYEQN 184
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A+ I ++ ++ PD +T V+ SAC G L+L +V + V V +
Sbjct: 185 GLAERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRV--VSERMDISVF 242
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++L++MY +CG +D A + F + + NV +WTSMI GY +G EA+ FH MR G
Sbjct: 243 LGSALVNMYARCGVVDKARRWFDALQERNVVTWTSMIAGYGMHGHGREAIKLFHLMRCEG 302
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PNHVTFV VLSAC H G V EG+ F MK VY + PR HY MVD+ GRAGLL+EA
Sbjct: 303 PPPNHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEA 362
Query: 381 RAMVEG-MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
+ MP + +W ++GAC+ N +G VA+ L LEP + +V+LSNIYA
Sbjct: 363 MQFISDYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYAL 422
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
G VE++R M R L K +SL
Sbjct: 423 SGKMHHVEKVRNTMIKRRLKKQIGFSL 449
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 227/418 (54%), Gaps = 9/418 (2%)
Query: 43 FLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAP 102
F+ + E A +KC +L ++ + + M+ S WN +I + + P
Sbjct: 431 FIQSDELVANAFVAGYAKCGSLHYAEGVFCGM-ESKMVSS------WNALIGGHVQNGFP 483
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
+KALD+Y+ M +G+ PD +T+ +L A +L +L G+++H +R G E +EF
Sbjct: 484 RKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISL 543
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+SLY + G A+ FD E+ L WN +I G SQ+ +A+DMF + PD+
Sbjct: 544 VSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDE 603
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
++++ AC + L L ++H F VKS + + SLIDMY KCG M+ + +F
Sbjct: 604 ISIIGALGACSQVSALRLGKELH--CFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIF 661
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ +W +I GY +G +A++ F M+ +G RP+ VTF+ +L+AC H G V
Sbjct: 662 DRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVA 721
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG + M++++ I+P+ HY C+VD+LGRAG L EA +V +P K + IW L+ +
Sbjct: 722 EGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSS 781
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
C + ++ +GE VA L EL P YV++SN YA G W+EV ++R MK L K
Sbjct: 782 CRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQK 839
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 162/323 (50%), Gaps = 14/323 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN ++ Y R + A+ +++ M S +PD +TLP V+KA ++ + +G +H
Sbjct: 161 FLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHG 220
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A++ + S+ F + I++Y K G E A KVFD+ P+R L SWN+++ ++G +E
Sbjct: 221 FALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEE 280
Query: 206 AIDMFIGLKKC--GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +F GL G PD TMV+V C G++ L + H +K + + +
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG--LALKLGLCGELKVNS 338
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
SL+DMY KCG + A +V ++ ++ NV SW SMI GY+ + A + M+ E ++
Sbjct: 339 SLLDMYSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVK 397
Query: 323 PNHVTFVGVLSAC---VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
N VT + VL C + K++E H + + Q + A+ V + G L
Sbjct: 398 VNEVTLLNVLPVCEEEIQFLKLKE-IHGYALRHGFIQSDELVAN--AFVAGYAKCGSLHY 454
Query: 380 ARAMVEGMPMKANVVIWGCLMGA 402
A + GM K V W L+G
Sbjct: 455 AEGVFCGMESKM-VSSWNALIGG 476
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 139/273 (50%), Gaps = 9/273 (3%)
Query: 137 LEIGRQLHS-LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+EIGR++H+ ++ +++ + +++YS + VF+ + + L WNA+++
Sbjct: 109 IEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLS 168
Query: 196 GLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G ++ ++A+ +F+ + F PD+ T+ V AC + D+ L VH F +K+K
Sbjct: 169 GYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHG--FALKTK 226
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
SD + N+LI MYGK G ++ A KVF ++ Q N+ SW S++ NG+ E+ F
Sbjct: 227 VLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFK 286
Query: 315 YM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
+ + G+ P+ T V V+ C G+V+ G F + + + ++D+
Sbjct: 287 GLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL-GLCGELKVNSSLLDMYS 345
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ G L EAR + + + NV+ W ++G K
Sbjct: 346 KCGYLCEARVLFD--TNEKNVISWNSMIGGYSK 376
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 8/179 (4%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
CG ++E+ ++H ++ ++D +++ L+ MY C + VF + N+
Sbjct: 103 CGEYKNIEIGRKIHNFI-STSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLF 161
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSAC--VHGGKVQEGKHFF 348
W +++ GY N L +A+ F M + P++ T V+ AC V+ ++ E H F
Sbjct: 162 LWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGF 221
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ V + F ++ + G+ G +E A + + MP + N+V W +M AC + G
Sbjct: 222 ALKTKV--LSDVFVG-NALIAMYGKFGFVESAVKVFDKMPQR-NLVSWNSVMYACLENG 276
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 218/383 (56%), Gaps = 4/383 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + A +A + M ++G P+ TL VL A ++ +L++G+Q+H+ ++
Sbjct: 211 WNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSI 270
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + F + I +YSK G AR +F E E+ S+N +I G SQ E++
Sbjct: 271 RRGLMFDLFISNALIDMYSKCGQLSLARNIF-ERSEKDDVSYNTLILGYSQSPWCFESLL 329
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G + D V+ + SAC +L + ++H + V+ + NSL+D+
Sbjct: 330 LFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVL--VRRLLSGHPFLSNSLLDL 387
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F +I + +V+SW +MI+GY +G + A + F M+ G+ +HV++
Sbjct: 388 YTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSY 447
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V +GK +F M IEP+ HY CMVDLLGRAG L + ++ MP
Sbjct: 448 IAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMP 506
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN +WG L+GAC GN+++ +W A+HL EL+P G Y ++ N+YA G W E +
Sbjct: 507 FPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANK 566
Query: 449 IRAVMKHRNLAKIPAYSLATRLD 471
IR +MK R + K PAYS D
Sbjct: 567 IRKLMKSRKVQKNPAYSWVQDQD 589
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 168/313 (53%), Gaps = 7/313 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ I + L ++ MS V+P TL +L A +L + ++GR++H ++
Sbjct: 110 WNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSI 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + F + + +Y+K G EKA +F++ +R + SWNA+IA L Q+G EA
Sbjct: 170 KRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFR 229
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++K G P+ +T+V+V AC + L++ Q+H + ++ D + N+LIDM
Sbjct: 230 LVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAW--SIRRGLMFDLFISNALIDM 287
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ LA +F ++ +V S+ ++I+GY+ + E+L F MR GI + V+F
Sbjct: 288 YSKCGQLSLARNIFERSEKDDV-SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSF 346
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+G LSAC + + GK +++ + P ++ ++DL + G+L A + +
Sbjct: 347 MGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKI 404
Query: 388 PMKANVVIWGCLM 400
K +V W ++
Sbjct: 405 T-KKDVASWNTMI 416
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 12/290 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + A + M R+G + +L V+ A + G +H+LAV
Sbjct: 9 WNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL + + + +Y K GD E + +VFD E+ SWN+ I G + +
Sbjct: 69 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 128
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + + P +T+ S+ A LG +L +VH Y +K D + NSL+DM
Sbjct: 129 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGY--SIKRAMDLDIFVANSLVDM 186
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G ++ A +F ++ NV SW +MI NG EA M++SG PN +T
Sbjct: 187 YAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITL 246
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
V VL AC ++ GK QI G M DL L++
Sbjct: 247 VNVLPACARMASLKMGK----------QIHAWSIRRGLMFDLFISNALID 286
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
PER + SWN++++ +G +A + + + GF + ++VSV ACG+ + + L
Sbjct: 2 PERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGL 61
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+H VK + + N+L+DMYGK G ++ + +VF + + N SW S I +
Sbjct: 62 SIH--ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLN 119
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPR 360
G + L F M E + P +T +L A V G G+ H + +K ++
Sbjct: 120 AGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYS-IKRAMDLDIF 178
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
A+ +VD+ + G LE+A + E M + NVV W ++
Sbjct: 179 VAN--SLVDMYAKFGSLEKASTIFEQMKDR-NVVSWNAMI 215
>gi|356567046|ref|XP_003551734.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g36730-like [Glycine max]
Length = 505
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 216/385 (56%), Gaps = 10/385 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR Y ++P +A ++ M G +P+ T P +LK+ AL G+Q+H+ AV
Sbjct: 84 WNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVASALFEGKQVHADAV 143
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+S+ + + I+ Y ARKVF E PER + SWN+++ + + I
Sbjct: 144 KCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEMPERTVVSWNSVMTACVESLWLGDGIG 203
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + CGFEPD+ +MV + SAC LG L L VH + V + +L+DM
Sbjct: 204 YFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQL--VLRGMVLSVQLGTALVDM 261
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-----GIRP 323
YGK G + A VF ++ NV +W++MI+G A +G EAL+ F M + IRP
Sbjct: 262 YGKSGALGYARDVFERMENRNVWTWSAMILGLAQHGFGEEALELFAIMNNNNNDNRDIRP 321
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N+VT++GVL AC H G V EG +F M+ V+ I+P HYG MVD+LGRAG LEEA
Sbjct: 322 NYVTYLGVLCACSHAGMVDEGYQYFHDMECVHGIKPLMTHYGAMVDVLGRAGRLEEAYEF 381
Query: 384 VEGMPMKANVVIWGCLMGAC---EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
++ MP++ + V+W L+ AC + + +GE V+K L EP G V+++N+YA
Sbjct: 382 IQSMPIEPDPVVWRTLLSACTVHDVHDHTGIGERVSKKLLLKEPRRGGNLVIVANMYAEV 441
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G+WEE +R VM+ + K+ S
Sbjct: 442 GMWEEAANVRRVMRDGGMKKVAGES 466
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 33/165 (20%)
Query: 288 PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
P+ SW +I GYAA+ EA F MRE G PN +TF +L +C + EGK
Sbjct: 79 PSPISWNILIRGYAASDSPLEAFWVFRKMRERGAMPNKLTFPFLLKSCAVASALFEGKQV 138
Query: 348 FE------MMKNVYQIEPRFAHYGC---MVDLLGRAGLLEEARAMVEGMPMKANV----- 393
+ +VY YGC +VD G + E + M A V
Sbjct: 139 HADAVKCGLDSDVYVGNNLINFYGCCKKIVDARKVFGEMPERTVVSWNSVMTACVESLWL 198
Query: 394 --------VIWGC-----------LMGACEKFGNVKMGEWVAKHL 419
+WGC L+ AC + G + +G WV L
Sbjct: 199 GDGIGYFFRMWGCGFEPDETSMVLLLSACAELGYLSLGRWVHSQL 243
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 219/412 (53%), Gaps = 37/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + P+K +D++ M +GV P+ T+ +L A +L L+ G+++H AV
Sbjct: 147 WTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 206
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS------------------- 189
R G+ N F S +SLY+K +AR VFD P R + S
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFS 266
Query: 190 ----------------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
WNA+I G ++GR++EA++MF ++K GF+P+++T+ S+ AC
Sbjct: 267 LFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACS 326
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L + ++H YVF + + D +L+ MY KCG ++L+ VF + + +V +W
Sbjct: 327 FSENLRMGKEIHCYVF--RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAW 384
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+MI+ A +G EAL F M S ++PN VTF GVLS C H V+EG F M
Sbjct: 385 NTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGR 444
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ +EP HY C+VD+ RAG L EA ++GMPM+ WG L+ AC + NV++ +
Sbjct: 445 DHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAK 504
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
AK L E+EP + G YV L NI + +W E ++R +MK R + K P S
Sbjct: 505 ISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 556
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 10/253 (3%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKAS--CQLF--ALEIGRQLHSLAVRLGLESNEFCE 159
+A+ IY + G+ PD +P+ L A+ C + AL + +++H A R G+ S+ F
Sbjct: 61 EAIKIYSSLQERGIKPD---MPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVG 116
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ I Y K E AR+VFD+ R + SW ++ + + G ++ +D+F + G +
Sbjct: 117 NALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVK 176
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ +T+ S+ AC L DL+ ++H F V+ + + ++L+ +Y KC + A
Sbjct: 177 PNPMTVSSILPACAELKDLKSGKEIHG--FAVRHGMVVNLFVCSALVSLYAKCLSVREAR 234
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF + +V SW ++ Y N + F M G+R + T+ V+ C+ G
Sbjct: 235 MVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG 294
Query: 340 KVQEGKHFFEMMK 352
+ +E F M+
Sbjct: 295 RSEEAVEMFRKMQ 307
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 16/247 (6%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I + GDF +AR++FD P+ + + +I+ L+ G + EAI ++ L++ G +PD
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
++ AC GD +VH + SD + N+LI YGKC ++ A +V
Sbjct: 78 MPVFLAAAKACAVSGDALRVKEVHDDA--TRCGVMSDVFVGNALIHAYGKCKCVEGARRV 135
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F ++ +V SWTS+ Y G + +D F M SG++PN +T +L AC +
Sbjct: 136 FDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDL 195
Query: 342 QEGK--HFFE----MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ GK H F M+ N++ +V L + + EAR + + MP + +VV
Sbjct: 196 KSGKEIHGFAVRHGMVVNLFVCS-------ALVSLYAKCLSVREARMVFDLMPHR-DVVS 247
Query: 396 WGCLMGA 402
W ++ A
Sbjct: 248 WNGVLTA 254
>gi|125595888|gb|EAZ35668.1| hypothetical protein OsJ_19954 [Oryza sativa Japonica Group]
Length = 510
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 205/312 (65%), Gaps = 10/312 (3%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGF 218
+ +S Y+K G + A K+F+E P+R + SW A+++G +Q+GR +EA++ F+ + ++ G
Sbjct: 157 NALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGV 216
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNSLIDMYGKCGRM 275
+P+++T+ SV AC ++G +EL +V +Y ++ K + + N+L++MY KCG +
Sbjct: 217 QPNELTVSSVLPACAAVGAMELGRKVEEY-----ARGKGLLRNVYVANALLEMYSKCGSI 271
Query: 276 DLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
A++VF I Q ++ SW SMI+ +A +GL EAL F+ +R +G++P+ +TFVGV+ A
Sbjct: 272 RQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILA 331
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C HGG V EGK FF+ M+ + ++PR HYGCMVDLLGRAGLL E+ +++ MP++ + V
Sbjct: 332 CTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAV 391
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+GAC GNV++ E L LEP + V+LSNIYAS G W+ V ++ ++K
Sbjct: 392 IWGALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLK 451
Query: 455 HRNLAKIPAYSL 466
++ K YS
Sbjct: 452 EKDHKKSAGYSF 463
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y + ++A++ ++ M RAGV P+ T+ VL A + A+E+GR++ A
Sbjct: 187 WTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYA 246
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEA 206
GL N + + + +YSK G +A +VF ++ L SWN++I + G +EA
Sbjct: 247 RGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREA 306
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSAC---GSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +F L+ G +PD +T V V AC G + + +L + F +K + + M
Sbjct: 307 LALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCM-- 364
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG---LANEALD 311
+D+ G+ G + +Y + + +P+ W +++ + +G LA A+D
Sbjct: 365 --VDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMD 414
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT + N+L+ Y K G +D A K+F E+ NV SWT+M+ GYA NG EA++ F M
Sbjct: 152 DTAVYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMW 211
Query: 318 E-SGIRPNHVTFVGVLSACVHGGKVQEGKHFFE------MMKNVYQIEPRFAHYGCMVDL 370
E +G++PN +T VL AC G ++ G+ E +++NVY ++++
Sbjct: 212 ERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVA-------NALLEM 264
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G + +A + +G+ + ++ W ++ A
Sbjct: 265 YSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMA 296
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + ++ SD + ++L+ Y K + A KVF E+ + + + +++ YA G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
L + A F M + N V++ ++S G+ +E F M ++P
Sbjct: 168 LVDSAEKLFEEMPDR----NVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTV 223
Query: 365 GCMVDLLGRAGLLEEARAMVE---GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL-- 419
++ G +E R + E G + NV + L+ K G+++ V + +
Sbjct: 224 SSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGR 283
Query: 420 -QELEPWSDGAYVVLSNIYASRGLWEE 445
Q+L W+ + +A GLW E
Sbjct: 284 QQDLCSWNS-----MIMAFAVHGLWRE 305
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 213/379 (56%), Gaps = 3/379 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + ++ M GV PDC+TL VLKAS + L Q+H + +
Sbjct: 207 WNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIII 266
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD-GRAKEAI 207
+LG S+ I Y+K+ + A ++ ++ + S+ AI+ G ++ ++EA+
Sbjct: 267 QLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREAL 326
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D+F ++ E DDVT ++ + C + L + Q+H +K K D N+L+D
Sbjct: 327 DLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIH--ALAIKYKPSYDVATGNALVD 384
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY K G ++ A + F+E+ + NV SWTS+I GY +G +EA+ + M G++PN +T
Sbjct: 385 MYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDIT 444
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +L AC H G EG F M Y I PR HY CM+DL R G LEEA M+ M
Sbjct: 445 FLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKM 504
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
+K N +WG ++GAC +G++ +GE A HL ++P + YVVL+ IYA+ G W++
Sbjct: 505 NIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKAC 564
Query: 448 RIRAVMKHRNLAKIPAYSL 466
R+R +M++R+L KIP YS+
Sbjct: 565 RMRNLMEYRSLKKIPGYSI 583
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I Y + + AL ++ M RAGV + +T VL+A L LE G Q+H
Sbjct: 106 WTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQ 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ N F +S + L+SK G+ E AR +F+ ER + SWNA+I G + ++
Sbjct: 166 KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFR 225
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + G PD T+ SV A +L Q+H + Q+ D + SLID
Sbjct: 226 MFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHID--LNGSLIDA 283
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIRPNHVT 327
Y K M A ++ + + +V S+T+++ GYA + EALD F M+ + + VT
Sbjct: 284 YAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVT 343
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F +L+ C + G+ + Y+ A +VD+ ++G +E+A M
Sbjct: 344 FCTMLNVCADIASLSIGRQIHALAIK-YKPSYDVATGNALVDMYAKSGEIEDATRAFYEM 402
Query: 388 PMKANVVIWGCLMGACEKFG 407
K NV+ W L+ K G
Sbjct: 403 KEK-NVISWTSLITGYGKHG 421
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%), Gaps = 2/208 (0%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ + L+ G +HS +R G +SN + I Y K G+ ARKVFD PER
Sbjct: 43 ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A I+G +++G ++A+ +F + + G + T SV AC L LE +Q+H
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ K++ + + ++L+D++ KCG M+ A +F + + +V SW ++I GYAA
Sbjct: 163 CI--QKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFN 220
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSA 334
+++ F+ M G+ P+ T VL A
Sbjct: 221 DDSFRMFYSMMGEGVTPDCFTLGSVLKA 248
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 4/171 (2%)
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C DL+ +H ++ +++ S+ + LI Y K G A KVF + + NV
Sbjct: 47 CIETEDLKQGCLIHSHI--IRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVV 104
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SWT+ I GYA NG +AL F M +G+R N T+ VL AC ++ G +
Sbjct: 105 SWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCI 164
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ I F +VDL + G +E+AR + E M + +VV W ++G
Sbjct: 165 QKNRFIGNLFVQ-SALVDLHSKCGNMEDARYLFETMSER-DVVSWNAVIGG 213
>gi|115456255|ref|NP_001051728.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|29124127|gb|AAO65868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711802|gb|ABF99597.1| expressed protein [Oryza sativa Japonica Group]
gi|113550199|dbj|BAF13642.1| Os03g0821700 [Oryza sativa Japonica Group]
gi|125588431|gb|EAZ29095.1| hypothetical protein OsJ_13153 [Oryza sativa Japonica Group]
gi|215736898|dbj|BAG95827.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 602
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 222/389 (57%), Gaps = 12/389 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDI-----YIFMSRAGVLPDCYTLPIVLKASCQL-FALEI 139
AF N +IR + +P +L + + M R V+P+ +T P +LKA L + ++
Sbjct: 88 AFLANTLIRAHA--TSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDV 145
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYS--KAGDFEKARKVFDENPERKLGSWNAIIAGL 197
G Q H+ A++ G ++++ + I +YS G AR VFD P+ +W+A+I G
Sbjct: 146 GLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGY 205
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ G + +A+D+F ++ G + D+VT++ V +A LG LELA V ++V + + KS
Sbjct: 206 VRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFV-EREGIGKS 264
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
TL N+LID KCG +D A VF + Q +V SWTS+I A G EA+ F M+
Sbjct: 265 VTL-CNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMK 323
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+G+ P+ V F+GVL+AC H G V EG +F+ MK Y IEP+ HYGCMVD+ GRAG++
Sbjct: 324 VAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMV 383
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
E A V MP++ N VIW L+ AC G +++GE + + L P + Y++LSN++
Sbjct: 384 ERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVF 443
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A W+E IR M R + K+P S+
Sbjct: 444 ALTQRWKEKSEIRREMSKRGIKKVPGCSI 472
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+A W+ +I Y R A+D++ M GV D T+ VL A+ L ALE+ R +
Sbjct: 194 SAVTWSAMIGGYVRGGLSSDAVDLFREMQANGVQADEVTVIGVLAAATDLGALELARWVR 253
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
R G+ + + I +K GD + A VF+ +R + SW ++I L+ +GR K
Sbjct: 254 RFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGK 313
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F +K G PDDV + V +AC G
Sbjct: 314 EAVRVFEEMKVAGVPPDDVAFIGVLTACSHAG---------------------------- 345
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
++D CG D A KV + I +P + + M+ + G+ A++ ++R I+PN
Sbjct: 346 MVDE--GCGYFD-AMKVEYGI-EPKIEHYGCMVDMFGRAGMVERAME---FVRTMPIQPN 398
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
V + ++SAC G+++ G+ + + Y
Sbjct: 399 PVIWRSLVSACRAHGRLELGESITRSLLHEY 429
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 225/379 (59%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + + P A + M G+ PD TL + + Q + R +H +
Sbjct: 342 WNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIM 401
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G L + + +Y+K G + A KVF+ P + + SWN +I+G +Q+G A EAI
Sbjct: 402 RRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAI 461
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++ +++C + + T VS+ +A +G L+ +++H ++ +K+ D + LI
Sbjct: 462 EVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHL--IKTNLHLDVFVGTCLI 519
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGKCGR+ A +F+++ + + W ++I + +G +AL F M++ G++P+HV
Sbjct: 520 DLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHV 579
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+ +LSAC H G V EGK FF +M+ Y I+P HYGCMVDLLGRAG LE A ++
Sbjct: 580 TFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKD 638
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP+ + IWG L+GAC GN+++G++ + L E++ + G YV+LSNIYA+ G WE V
Sbjct: 639 MPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGV 698
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+++R++ + R L K P +S
Sbjct: 699 DKVRSLARERGLKKTPGWS 717
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 187/377 (49%), Gaps = 13/377 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALD-IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN++I Y R ++A+D Y + D YT P VLKA CQ L GR++H
Sbjct: 140 YTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA-CQ--TLVDGRKIHC 196
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+LG + + F + I +YS+ G AR +FD+ P R +GSWNA+I+GL Q+G A +
Sbjct: 197 WVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 256
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+D+ ++ G D VT+ S+ C LGD+ A +H YV +K + + + N+L
Sbjct: 257 ALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYV--IKHGLEFELFVSNAL 314
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I+MY K G + A KVF ++ +V SW S+I Y N A F M+ +G+ P+
Sbjct: 315 INMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDL 374
Query: 326 VTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T V + S + + H F +M+ + +E M D+ + G+++ A +
Sbjct: 375 LTLVSLASIAAQSRDYKNSRSVHGF-IMRRGWLMEAVVIGNAVM-DMYAKLGVIDSAHKV 432
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE--PWSDGAYVVLSNIYASRG 441
+P+K +VV W L+ + G V + ++E + G +V + YA G
Sbjct: 433 FNLIPVK-DVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG 491
Query: 442 LWEEVERIRAVMKHRNL 458
++ RI + NL
Sbjct: 492 ALQQGMRIHGHLIKTNL 508
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 145/291 (49%), Gaps = 14/291 (4%)
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+ ++LH+L V G + F ++LY+ GD +R FD+ + + +WN++I+
Sbjct: 91 LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYV 150
Query: 199 QDGRAKEAIDMFIG-LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
++G +EAID F L F+ D T V AC +L D ++H +VF++ +
Sbjct: 151 RNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQW-- 205
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D + SLI MY + G + +A +F ++ ++ SW +MI G NG A +ALD MR
Sbjct: 206 DVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR 265
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
GI + VT +L C G + H + ++K+ + E ++ ++++ + G
Sbjct: 266 LEGINMDSVTVASILPVCAQLGDISTATLIHLY-VIKHGLEFELFVSN--ALINMYAKFG 322
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGN--VKMGEWVAKHLQELEP 424
L +A+ + + M ++ +VV W ++ A E+ + G + L LEP
Sbjct: 323 NLGDAQKVFQQMFLR-DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEP 372
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 206/336 (61%), Gaps = 2/336 (0%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD + +L + G +H+ ++ GL ++ +G IS+YSK GD E +
Sbjct: 348 PDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSL 407
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F E E++L SWN++I+ Q GR +A+++F ++ G PD +T+ S+ + C +G L
Sbjct: 408 FSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFL 467
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H YV +++ + + +L+DMY KCGR++ A +VF I +P +++W +MI
Sbjct: 468 QFGERLHNYV--LRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMIS 525
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G + AL C+ M+E G++P+ +TF+GVLSAC HGG V EGK +F M+ + +
Sbjct: 526 GYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMI 585
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P H CMVDLL RAG LEEA V+ M ++ + IWG L+ +C +K+GE +AK
Sbjct: 586 PGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKR 645
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
L L+ +S G YV++SN+YAS+G W++V R+R +MK
Sbjct: 646 LLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMK 681
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 18/274 (6%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q+ + + G + + F+ Y K G A+ +F+E P R + SWNA+I G S++G
Sbjct: 74 QIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNG 133
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A+++F+ + + GF P T+V + +CG + +H F +KS D +
Sbjct: 134 YDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHG--FGIKSGLDLDCRV 191
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L MY KC + A +F EI + SW +MI Y NGL +EA+ F M++ +
Sbjct: 192 KNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERV 251
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL----GRAGLL 377
N+VT + +LSA H + H Y I+ FA ++ L G +
Sbjct: 252 EVNYVTIISLLSANAH----LDSTH-------CYVIKTGFATDASVITSLVCSYAGCGNI 300
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
E A + MP + V + + G EK GN+ +
Sbjct: 301 ESAGLLYNLMPQRNLVSLTAMISGYAEK-GNMGL 333
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 10/245 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-GRQLHSLA 147
WN +I Y+R AL++++ M R G P C + L SC + G+ +H
Sbjct: 122 WNALICGYSRNGYDYDALEVFVQMLREG-FPPCQRTLVGLVPSCGRPDIIFQGKAIHGFG 180
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ GL+ + ++ S+Y+K D + A +F+E E+ SWN +I Q+G EA+
Sbjct: 181 IKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAM 240
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++K E + VT++S+ SA L H YV +K+ +D ++ SL+
Sbjct: 241 LVFKQMQKERVEVNYVTIISLLSANAHLD------STHCYV--IKTGFATDASVITSLVC 292
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y CG ++ A ++ + Q N+ S T+MI GYA G ++CF M + ++P+ V
Sbjct: 293 SYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVA 352
Query: 328 FVGVL 332
V +L
Sbjct: 353 MVSIL 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ A++++ M G PD T+ +L ++ L+ G +LH+ +
Sbjct: 419 WNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVL 478
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L+ +F E+ + +Y K G E A +VF E L +WN +I+G G A+
Sbjct: 479 RNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALS 538
Query: 209 MFIGLKKCGFEPDDVTMVSVTSAC 232
+ +++ G +PD +T + V SAC
Sbjct: 539 CYSEMQEQGLKPDRITFLGVLSAC 562
>gi|6983870|dbj|BAA90805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125553873|gb|EAY99478.1| hypothetical protein OsI_21446 [Oryza sativa Indica Group]
Length = 510
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 205/312 (65%), Gaps = 10/312 (3%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGF 218
+ +S Y+K G + A K+F+E P+R + SW A+++G +Q+GR +EA++ F+ + ++ G
Sbjct: 157 NALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGV 216
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNSLIDMYGKCGRM 275
+P+++T+ SV AC ++G +EL +V +Y ++ K + + N+L++MY KCG +
Sbjct: 217 QPNELTVSSVLPACAAVGAMELGRKVEEY-----ARGKGLLRNVYVANALLEMYSKCGSI 271
Query: 276 DLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
A++VF I Q ++ SW SMI+ +A +GL EAL F+ +R +G++P+ +TFVGV+ A
Sbjct: 272 RQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREALALFYKLRMAGVKPDGITFVGVILA 331
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C HGG V EGK FF+ M+ + ++PR HYGCMVDLLGRAGLL E+ +++ MP++ + V
Sbjct: 332 CTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCMVDLLGRAGLLIESYSLIASMPVEPDAV 391
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+GAC GNV++ E L LEP + V+LSNIYAS G W+ V ++ ++K
Sbjct: 392 IWGALLGACSFHGNVELAELAMDKLIHLEPQNTANLVILSNIYASSGKWDGVAQVWKLLK 451
Query: 455 HRNLAKIPAYSL 466
++ K YS
Sbjct: 452 EKDHKKSAGYSF 463
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y + ++A++ ++ M RAGV P+ T+ VL A + A+E+GR++ A
Sbjct: 187 WTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYA 246
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEA 206
GL N + + + +YSK G +A +VF ++ L SWN++I + G +EA
Sbjct: 247 RGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMAFAVHGLWREA 306
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSAC---GSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +F L+ G +PD +T V V AC G + + +L + F +K + + M
Sbjct: 307 LALFYKLRMAGVKPDGITFVGVILACTHGGLVNEGKLFFDSMEAEFSLKPRIEHYGCM-- 364
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG---LANEALD 311
+D+ G+ G + +Y + + +P+ W +++ + +G LA A+D
Sbjct: 365 --VDLLGRAGLLIESYSLIASMPVEPDAVIWGALLGACSFHGNVELAELAMD 414
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 14/152 (9%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT + N+L+ Y K G +D A K+F E+ NV SWT+M+ GYA NG EA++ F M
Sbjct: 152 DTAVYNALLSAYAKGGLVDSAEKLFEEMPDRNVVSWTAMVSGYAQNGRHEEAVETFLEMW 211
Query: 318 E-SGIRPNHVTFVGVLSACVHGGKVQEGKHFFE------MMKNVYQIEPRFAHYGCMVDL 370
E +G++PN +T VL AC G ++ G+ E +++NVY ++++
Sbjct: 212 ERAGVQPNELTVSSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVA-------NALLEM 264
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ G + +A + +G+ + ++ W ++ A
Sbjct: 265 YSKCGSIRQAWQVFQGIGRQQDLCSWNSMIMA 296
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 15/207 (7%)
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + ++ SD + ++L+ Y K + A KVF E+ + + + +++ YA G
Sbjct: 108 HSLLIKLGHFASSDPFLSSALVSFYAKSKLLVEARKVFDELTCRDTAVYNALLSAYAKGG 167
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
L + A F M + N V++ ++S G+ +E F M ++P
Sbjct: 168 LVDSAEKLFEEMPDR----NVVSWTAMVSGYAQNGRHEEAVETFLEMWERAGVQPNELTV 223
Query: 365 GCMVDLLGRAGLLEEARAMVE---GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL-- 419
++ G +E R + E G + NV + L+ K G+++ V + +
Sbjct: 224 SSVLPACAAVGAMELGRKVEEYARGKGLLRNVYVANALLEMYSKCGSIRQAWQVFQGIGR 283
Query: 420 -QELEPWSDGAYVVLSNIYASRGLWEE 445
Q+L W+ + +A GLW E
Sbjct: 284 QQDLCSWNS-----MIMAFAVHGLWRE 305
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 212/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I+ + K+A++ + M G+ D Y VL A L A+ G+Q+H+ +
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + + + S I +Y K A+ VFD ++ + SW A++ G Q GRA+EA+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ G +PD T+ SAC ++ LE Q H + S + NSL+ +
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA--ITSGLIHYVTVSNSLVTL 415
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D + ++F E++ + SWT+M+ YA G A E + F M + G++P+ VT
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
GV+SAC G V++G+ +F++M + Y I P HY CM+DL R+G LEEA + GMP
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + W L+ AC GN+++G+W A+ L EL+P Y +LS+IYAS+G W+ V +
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ +N+ K P S
Sbjct: 596 LRRGMREKNVKKEPGQS 612
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 164/355 (46%), Gaps = 45/355 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I Y+ A+ Y M R + L TL +LK S + +G+Q+H
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV-TLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVF----DENP------------------- 183
++LG ES S + +Y+ G A+KVF D N
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 184 -------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
E+ SW A+I GL+Q+G AKEAI+ F +K G + D SV ACG LG
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+ Q+H + +++ + + ++LIDMY KC + A VF + Q NV SWT+M
Sbjct: 285 AINEGKQIHACI--IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
+VGY G A EA+ F M+ SGI P+H T +SAC + ++EG F
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----A 397
Query: 357 IEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
I HY +V L G+ G ++++ + M ++ + V W ++ A +FG
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFG 451
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-I 211
+ N F + + YSKAG + F++ P+R +WN +I G S G A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK----------------- 254
++ VT++++ S G + L Q+H V ++ +
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 255 ------------QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+T+M NSL+ CG ++ A ++F +++ +V SW +MI G A
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQ 247
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
NGLA EA++CF M+ G++ + F VL AC G + EGK + I F
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI-----IRTNFQ 302
Query: 363 HY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ ++D+ + L A+ + + M K NVV W ++
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMV 343
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +T + ++AL ++ M G D T KA+ L L+ G+Q+H++ +
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVI 527
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ + F SG + +Y K G+ + ARKVF++ P +W +I+G ++G ++A+
Sbjct: 528 KMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALF 587
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ G +PD+ T ++ AC L LE Q+H + ++ D ++ SL+DM
Sbjct: 588 TYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCA--FDPFVMTSLVDM 645
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ AY +F ++ +V+ W +MIVG A +G A EAL+ F+ M+ G+ P+ VTF
Sbjct: 646 YAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTF 705
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G + F+ M+ Y +EP HY C+VD L RAG ++EA +V MP
Sbjct: 706 IGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMP 765
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+A+ ++ L+ AC G+ + GE VA+ L ++P AYV+LSNIYA+ WE
Sbjct: 766 FEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVS 825
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK N+ K P +S
Sbjct: 826 ARNMMKRVNVKKEPGFS 842
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 15/348 (4%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
+L Q+ A+ + + S WN + Y + +A+D + M ++ V D T
Sbjct: 242 ELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYI 301
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
++L L LE+G+Q+H VR G + + I++Y KAG AR++F + E
Sbjct: 302 VILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-LALQV 244
L SWN +I+G ++ G + ++ +FI L + G PD T+ SV AC SL + + QV
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQV 421
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H +K+ D+ + +LID+Y K G+M+ A +F D +++SW +M+ G+ +
Sbjct: 422 H--TCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSD 479
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
EAL F M E G + + +TF A ++Q+GK ++ I+ RF HY
Sbjct: 480 NYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVV-----IKMRF-HY 533
Query: 365 GCMV-----DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
V D+ + G ++ AR + +P +V W ++ C + G
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA-WTTVISGCVENG 580
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 29/247 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +++ Y + A + L ++ R+G+ PDC ++ +L + E R+L +
Sbjct: 191 WNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE--RELEQVRA 248
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
A K+F + + + WN ++ Q G EA+D
Sbjct: 249 Y-------------------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVD 283
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + K D +T + + S SL LEL Q+H V + Q + NS I+M
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS--VANSAINM 341
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G ++ A ++F ++ + ++ SW ++I G A +GL +L F + SG+ P+ T
Sbjct: 342 YVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTI 401
Query: 329 VGVLSAC 335
VL AC
Sbjct: 402 TSVLRAC 408
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 131/320 (40%), Gaps = 53/320 (16%)
Query: 99 LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
+E +A I+ + ++ +L +TL + K + L AV++GL+ + F
Sbjct: 100 VEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFV 159
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+++Y+K +AR +FD P R + WN ++ + G E + +F + G
Sbjct: 160 AGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGL 219
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
PD V++ ++ G K VF+ + +Q + Y A
Sbjct: 220 RPDCVSVRTILMGVGK-----------KTVFERELEQ----------VRAY--------A 250
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC--- 335
K+F D +V+ W + Y G EA+DCF M +S + + +T++ +LS
Sbjct: 251 TKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASL 310
Query: 336 --------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+HG V+ G F + N +++ +AG + AR M G
Sbjct: 311 NHLELGKQIHGAVVRFGWDQFVSVAN------------SAINMYVKAGSVNYARRMF-GQ 357
Query: 388 PMKANVVIWGCLMGACEKFG 407
+ +++ W ++ C + G
Sbjct: 358 MKEVDLISWNTVISGCARSG 377
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
+S + +LP ++ +L+ + L +G++ H++ V GL + + + I++Y+K G
Sbjct: 7 VSPSSLLPQWFS---ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGS 63
Query: 172 FEKARKVFDENPE--RKLGSWNAIIAGLSQDG------RAKEAIDMFIGLKKCGFEPDDV 223
ARK+FD P+ R L ++NAI+A + G + EA +F L++
Sbjct: 64 LFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH 123
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ + C G + + Y VK + D + +L+++Y K R+ A +F
Sbjct: 124 TLSPLFKLCLLYGSPSASEALQGYA--VKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
+ +V W M+ Y G +E L F SG+RP+ V+ +L
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 16/250 (6%)
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
+KC P + + ++ D +L L + V S D + N+LI MY KCG
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 274 RMDLAYKVFWEIDQPN--VSSWTSMIVGYAANG------LANEALDCFHYMRESGIRPNH 325
+ A K+F Q + + ++ +++ YA G +EA F +R+S +
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEARAM 383
T + C+ G + + +I ++ + G +V++ + + EAR +
Sbjct: 123 HTLSPLFKLCLLYGSPSASE---ALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVL 179
Query: 384 VEGMPMKANVVIWGCLMGACEKF--GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+ MP++ +VV+W +M A + G+ +G + A H L P +L +
Sbjct: 180 FDRMPVR-DVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTV 238
Query: 442 LWEEVERIRA 451
E+E++RA
Sbjct: 239 FERELEQVRA 248
>gi|414879943|tpg|DAA57074.1| TPA: hypothetical protein ZEAMMB73_804341 [Zea mays]
Length = 1056
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 219/384 (57%), Gaps = 11/384 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N++I R P ++ M V D TL ++ A+ L + Q+H+LA
Sbjct: 544 FNSLISGCARHSLPVACFALFRRMRAIAVRFDAVTLLALVPAA----PLSVVPQVHALAA 599
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA--RKVFDENP--ERKLGSWNAIIAGLSQDGRAK 204
++GL + + +S Y++ G F A R+VFDE P R L SWNA+++ +Q+G A
Sbjct: 600 QVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAV 659
Query: 205 EAIDMFIGLKK---CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A+D++ ++ G EPD VT+V V S+ LG + YV Q +++ +
Sbjct: 660 DALDLYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDAEHYVVQRLPGFRTNVQL 719
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+LI+ + +CG + A ++F E+ ++ SWT++I G+ +G A+ F M GI
Sbjct: 720 CNALINFHARCGSLPRAQQLFDEMPAKSIVSWTALITGHGMHGNGGVAVSLFERMVSEGI 779
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
P++V VGVLSAC H G EG+ +F M++VY++ P HY C+VDLLGRAG LEEAR
Sbjct: 780 HPDNVAMVGVLSACSHAGLYDEGRMYFSTMESVYKLRPTLEHYTCIVDLLGRAGRLEEAR 839
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
++ MPM A+ +WG L+GAC+ NV++GE + ELEP + G YV++SNIY G
Sbjct: 840 ELISSMPMPADGAVWGALLGACKIHKNVEIGEEAFARVVELEPRNVGYYVLMSNIYTDTG 899
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
+ V R+RAVM+ R L K P S
Sbjct: 900 QLDCVARVRAVMRKRGLKKEPGCS 923
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 156/341 (45%), Gaps = 34/341 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIG-RQLHSL 146
W+ +R TRL K+++ + G P + L + SC +L G Q+H+L
Sbjct: 436 WSARVRTLTRLGRHKESI---ALLRHGGPSPPPHALALPASVISCAALSLPTGVAQIHAL 492
Query: 147 AVRLGL--ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG------SWNAIIAGLS 198
A + GL ++ + S ++ YS+ G A ++ DE P ++N++I+G +
Sbjct: 493 AAKRGLLPAADAYLLSALLTAYSRLGCLRLAHQLLDETPIESTSHTTLRTAFNSLISGCA 552
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ +F ++ D VT++++ A L + QVH QV ++
Sbjct: 553 RHSLPVACFALFRRMRAIAVRFDAVTLLALVPA----APLSVVPQVHALAAQV--GLATE 606
Query: 259 TLMLNSLIDMYGKCGRMD--LAYKVFWEID--QPNVSSWTSMIVGYAANGLANEALDCFH 314
T + N L+ Y + G LA +VF E+ ++ SW +++ +A NGLA +ALD +
Sbjct: 607 TSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAVDALDLYR 666
Query: 315 YMRE---SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCM 367
MR SG+ P+ VT VGVLS+ H G G F+ V Q P F +
Sbjct: 667 RMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVG---FDAEHYVVQRLPGFRTNVQLCNAL 723
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
++ R G L A+ + + MP K ++V W L+ GN
Sbjct: 724 INFHARCGSLPRAQQLFDEMPAK-SIVSWTALITGHGMHGN 763
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 33/237 (13%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS--ACGSLGDLELALQVHK 246
SW+A + L++ GR KE+I + L+ G P + S +C +L Q+H
Sbjct: 435 SWSARVRTLTRLGRHKESIAL---LRHGGPSPPPHALALPASVISCAALSLPTGVAQIHA 491
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS------SWTSMIVGY 300
+ +D +L++L+ Y + G + LA+++ E + S ++ S+I G
Sbjct: 492 LAAKRGLLPAADAYLLSALLTAYSRLGCLRLAHQLLDETPIESTSHTTLRTAFNSLISGC 551
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-------VHGGKVQEGKHFFEMMKN 353
A + L F MR +R + VT + ++ A VH Q G + N
Sbjct: 552 ARHSLPVACFALFRRMRAIAVRFDAVTLLALVPAAPLSVVPQVHALAAQVGLATETSVAN 611
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEE--ARAMVEGMPMKA-NVVIWGCLMGACEKFG 407
C++ R G AR + + MP+ + ++V W ++ A + G
Sbjct: 612 ------------CLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNG 656
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 229/426 (53%), Gaps = 14/426 (3%)
Query: 51 AKIVATQLSKCTNLLQ---------LNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEA 101
A++V T S+C L+ YAH++ T H S +F ++++ R T
Sbjct: 28 ARLVVTGHSRCLPLITKLANLAVAAGAAPYAHLVATS--HPASDSFLFSSLARAATHQGL 85
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
P AL Y + A + + V KA L AL G +H+ ++ LG S+ F +
Sbjct: 86 PLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVHAHSILLGFGSDRFVLTA 145
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ LYSK G ARK+FD ++ + +WNA+I+G Q+G A++ I+++ +K PD
Sbjct: 146 LVVLYSKCGRLPVARKLFDAIRDKNVVAWNAMISGYEQNGLAEQGIEVYKEMKVAKAVPD 205
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+T V+ SAC G L+L +V + + V + + ++L++MY +CG +D A +
Sbjct: 206 SMTFVATLSACAQAGALDLGREVERRI--VSERMDISVFLGSALVNMYARCGVVDKARQW 263
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + NV +WTSMI GY +G +EA+ +H MR G PN VTFV VLSAC H G +
Sbjct: 264 FDVLQERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAHAGLI 323
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV-EGMPMKANVVIWGCLM 400
EG+ F MK VY + PR HY MVD+ GRAG LEEA + + MP +W ++
Sbjct: 324 TEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQFIRDSMPGDPGPEVWTAIL 383
Query: 401 GACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
GAC+ N +G VA+ L LEP + +V+LSNIYA G VE++R M R L K
Sbjct: 384 GACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGKMYHVEKVRNTMIKRRLKK 443
Query: 461 IPAYSL 466
YSL
Sbjct: 444 QIGYSL 449
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 227/413 (54%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHS 145
W + I L TR +A + M AGV P+ T I + + C F + +G LH
Sbjct: 39 WTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITF-IAILSGCGDFPSGSEALGDLLHG 97
Query: 146 LAVRLGLESNE-FCESGFISLYSKAGDFEKAR---------------------------- 176
A +LGL+ N + I +YSK G +KAR
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 177 ---KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
K+FD+ PER L SW A+I G G +EA+ F ++ G +PD V +++ +AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNACT 217
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+LG L L VH+YV + K++ + NSLID+Y +CG ++ A +VF ++++ V SW
Sbjct: 218 NLGALSFGLWVHRYV--MSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSW 275
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+IVG+AANG A+E+L F M+E +P+ VTF G L+AC H G V+EG +F++M +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMIS 335
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMG 412
Y+I PR HYGC+VDL RAG LE+A +V+ MPMK N V+ G L+ AC G N +
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLA 395
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E + KHL +L S YV+LSN+YA+ G WE ++R MK L K P +S
Sbjct: 396 EKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 54/322 (16%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG-------SLGDL--- 238
SW + I L+++GR EA F ++ G EP+ +T +++ S CG +LGDL
Sbjct: 38 SWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDLLHG 97
Query: 239 ---ELALQ-----VHKYVFQVKSK--------------QKSDTLMLNSLIDMYGKCGRMD 276
+L L V + + SK + +++ N++ID Y + G++D
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A K+F ++ + ++ SWT+MI G+ G EAL F M+ SG++P++V + L+AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAALNACT 217
Query: 337 HGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
+ G + G H + M ++ ++ R ++ ++DL R G +E AR + + M K VV
Sbjct: 218 NLGALSFGLWVHRYVMSQD-FKNNVRVSN--SLIDLYCRCGCVEFARQVFDKME-KRTVV 273
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD-----GAYVVLSNIYASRGLWEEVERI 449
W ++ GN + +QE D GA S++ GL EE R
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHV----GLVEEGLRY 329
Query: 450 RAVMKHRNLAKIPAYSLATRLD 471
+M I Y ++ R++
Sbjct: 330 FQIM-------ISDYRISPRIE 344
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
N SWTS I NG EA F MR +G+ PNH+TF+ +LS C G G
Sbjct: 35 NTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC---GDFPSGSEAL 91
Query: 349 EMMKNVYQIEPRFAHYGCMV-----DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
+ + Y + MV + + G +++AR + + M K N V W ++
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDK-NSVTWNTMIDGY 150
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
+ G V + AK ++ ++ + N + ++G EE
Sbjct: 151 MRSGQV---DNAAKMFDKMPERDLISWTAMINGFVNKGFHEE 189
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 217/409 (53%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y R P +A ++ M AG P+ TL A+ Q+ L +GR +H
Sbjct: 200 WTTLVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCV 259
Query: 148 VRLGLE-------------------------------SNEFCESGFISLYSKAGDFEKAR 176
V G+ + + + +S Y+K GD E A
Sbjct: 260 VESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAG 319
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+F E P R SW+ ++A SQ +EA+ +F + G EP D T+VSV SAC LG
Sbjct: 320 KLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLG 379
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L++ ++ + V K + + N+ IDM+ KCG + A ++F ++ NV SW +M
Sbjct: 380 CLDVGRCLYD-AYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTM 438
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
IV +A +G + EAL F + GI P+ +T++GVLSAC H G V EG++ F+ MK VY
Sbjct: 439 IVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYG 498
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEPR HY CM+DLLG+ GLLEEA + MP+ A+ WG L+ AC GNV++G+ A
Sbjct: 499 IEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAA 558
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L L+P G YV++S IYAS+ W +V+ IR VM+ R + K P S
Sbjct: 559 DKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKNPGCS 607
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 177/422 (41%), Gaps = 48/422 (11%)
Query: 18 SHPLLHRL--CKTHTFRKHVTISAASSFLDTHEDPAK--IVATQLSKCTNLLQLNQIYAH 73
+HPLL L C + + S L H PA + LS L + A
Sbjct: 31 THPLLSLLESCASFRRLLQLQALLTVSGLAAHRFPASRLLAFCALSDPPRLAHAAAVLAQ 90
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
A+ ++R + R P AL ++ + R + D T+ +KA+
Sbjct: 91 CAEG------PNAYMLATMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATT 144
Query: 134 LFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
+ +H +A + G + + + + +Y+ + ARK+FDE +R + SW
Sbjct: 145 --SSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTT 202
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
++ G ++ G EA +F + G P++VT+V+ SA G +G L L VH+ V V
Sbjct: 203 LVDGYARGGLPDEAWRVFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCV--V 260
Query: 252 KSKQKSDTLMLNSLIDMYG-------------------------------KCGRMDLAYK 280
+S + + N+L+DM+G KCG ++ A K
Sbjct: 261 ESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAYAKCGDLENAGK 320
Query: 281 VFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK 340
+F EI N SW+ M+ Y+ L EA+ F+ M +G+ P T V VLSAC G
Sbjct: 321 LFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGC 380
Query: 341 VQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G+ ++ +++E +D+ + G + A + M K NVV W ++
Sbjct: 381 LDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMEDK-NVVSWNTMI 439
Query: 401 GA 402
A
Sbjct: 440 VA 441
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 15/227 (6%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC +L +++ I + A W+ ++ Y++ P++A+ I+ M AGV
Sbjct: 310 AKCGDLENAGKLFKEIPNRN-------AVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVE 362
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLH-SLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
P TL VL A QL L++GR L+ + V +E + FI +++K GD A +
Sbjct: 363 PIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASR 422
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC---GS 234
+F ++ + SWN +I + G+++EA+ +F K G PD++T + V SAC G
Sbjct: 423 LFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGL 482
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+ + + K V+ ++ + + M ID+ GK G ++ A++V
Sbjct: 483 VSEGRYHFKEMKIVYGIEPRAEHYACM----IDLLGKVGLLEEAFEV 525
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV-SVTSACGSLGDLELALQVHKYVFQV 251
++ G + G+ A+ +F + + D T+V +V +A S E +H F+
Sbjct: 103 MMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAE---AIHCVAFKR 159
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
+S L+ N+L+ MY + A K+F E+ +V SWT+++ GYA GL +EA
Sbjct: 160 GFIGQS-VLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWR 218
Query: 312 CFHYMRESGIR-PNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVD 369
F M +G PN VT V SA G + G+ + ++++ ++ + +VD
Sbjct: 219 VFCRMVVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLEN--ALVD 276
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+ G+ G + A+ + +GMP+K +V W ++ A K G++ E K +E+ + +
Sbjct: 277 MFGKCGCVASAKEIFDGMPIK-DVYSWTSMVSAYAKCGDL---ENAGKLFKEIPNRNAVS 332
Query: 430 YVVLSNIYASRGLWEEVERI 449
+ + Y+ L EE RI
Sbjct: 333 WSCMVAAYSQANLPEEAMRI 352
>gi|15228026|ref|NP_181211.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216191|sp|Q9ZQA1.1|PP188_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g36730
gi|4415918|gb|AAD20149.1| hypothetical protein [Arabidopsis thaliana]
gi|330254198|gb|AEC09292.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 501
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 219/395 (55%), Gaps = 9/395 (2%)
Query: 76 RTHMLHSY-SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
RT +LHS S WN + R Y+ ++P +++ +Y M R G+ P+ T P +LKA
Sbjct: 67 RTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF 126
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII 194
L GRQ+ ++ G + + + + I LY ARKVFDE ER + SWN+I+
Sbjct: 127 LGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIM 186
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
L ++G+ + F + F PD+ TMV + SACG G+L L VH V + +
Sbjct: 187 TALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQV--MVRE 242
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF- 313
+ + + +L+DMY K G ++ A VF + NV +W++MIVG A G A EAL F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M+ES +RPN+VTF+GVL AC H G V +G +F M+ +++I+P HYG MVD+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACE---KFGNVKMGEWVAKHLQELEPWSDGAY 430
AG L EA ++ MP + + V+W L+ AC + +GE V K L ELEP G
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNL 422
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V+++N +A +W E +R VMK + KI S
Sbjct: 423 VIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
>gi|357131197|ref|XP_003567226.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Brachypodium distachyon]
Length = 648
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 196/309 (63%), Gaps = 6/309 (1%)
Query: 162 FISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC--- 216
IS+Y++ G AR+VFDE P R L SWNA+++ SQ+G A +A+D++ ++ C
Sbjct: 208 LISVYARRGA-ALARQVFDEMPAASRDLVSWNAVLSAHSQNGLAVDALDLYSRMRGCDGH 266
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
G EPD VT+VSV S+C LG + L V +Y+ +++ + N+LI+ Y +CG +
Sbjct: 267 GVEPDAVTLVSVLSSCAHLGARSVGLGVERYMRGKLPGFRTNVQLCNALINFYARCGCLP 326
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A ++F E+ + ++ SWT++I GY +G A++ F M GIRP++V VG+LSAC
Sbjct: 327 QAQQLFNEMPRKSIVSWTALITGYGMHGHGEVAINLFQTMVSEGIRPDNVAMVGLLSACS 386
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G EG+ +F M++ YQ+ P HY CMVDLLGRAG L+EAR ++ MPM A+ +W
Sbjct: 387 HAGMYDEGRKYFSAMESAYQLRPTLEHYTCMVDLLGRAGRLKEARELISSMPMPADGAVW 446
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+GAC+ NV++GE +H+ E+EP + G YV+++NIY G + V R+RA+M+ R
Sbjct: 447 GALLGACKIHKNVEIGEEAFEHVIEVEPTNVGYYVLMANIYTDTGQLDCVVRVRAMMRER 506
Query: 457 NLAKIPAYS 465
L K P S
Sbjct: 507 GLKKEPGCS 515
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 147/327 (44%), Gaps = 25/327 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG-RQLHSLA 147
W+ +R TRL + AL + + P LP + SC +L G Q+H+L
Sbjct: 31 WSARVRSLTRLGRHRDALAL-LRDGDPSPPPHALALPATV-ISCAALSLPSGVSQIHALG 88
Query: 148 VRLGL--ESNEFCESGFISLYSKAGDFEKARKVFDE------NPERKLGSWNAIIAGLSQ 199
+ GL S+ + S +S YS+ G A ++ DE P ++N++I+G +
Sbjct: 89 SKRGLLPSSDAYLVSALLSSYSRLGLLPCAHQLLDEMPLASTPPATLCTAFNSLISGCAL 148
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+F ++ G D VT++++ A ++ + ++ ++T
Sbjct: 149 HALPAACFALFRRMRVAGVRFDAVTLLTLVPAAPP------SVVPQLHALAARAGLAAET 202
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ N LI +Y + G LA +VF E+ ++ SW +++ ++ NGLA +ALD + MR
Sbjct: 203 SVANCLISVYARRG-AALARQVFDEMPAASRDLVSWNAVLSAHSQNGLAVDALDLYSRMR 261
Query: 318 ES---GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN-VYQIEPRFAHYGCMVDLLGR 373
G+ P+ VT V VLS+C H G G M+ + +++ R
Sbjct: 262 GCDGHGVEPDAVTLVSVLSSCAHLGARSVGLGVERYMRGKLPGFRTNVQLCNALINFYAR 321
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLM 400
G L +A+ + MP K ++V W L+
Sbjct: 322 CGCLPQAQQLFNEMPRK-SIVSWTALI 347
>gi|125584568|gb|EAZ25232.1| hypothetical protein OsJ_09035 [Oryza sativa Japonica Group]
Length = 674
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 210/344 (61%), Gaps = 7/344 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG--DFEKARKVFDENP 183
+ AS ++ + LH+L ++G E N + + Y+K G D E ARKVFD
Sbjct: 203 VAFSASARVPDRGVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM- 261
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLGDLELA 241
ER + SWN++IA +Q+G + EAI ++ + G + + V + +V AC G ++
Sbjct: 262 ERDVVSWNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTG 321
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
++H V V+ + + + S++DMY KCGR+++A + F +I + N+ SW++MI GY
Sbjct: 322 KRIHNQV--VRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYG 379
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+G EAL+ F M+ SG+RPN++TF+ VL+AC H G + EG++++ MK + IE
Sbjct: 380 MHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGV 439
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
HYGCMVDLLGRAG L+EA ++++ M +K + IWG L+ AC NV++ E K L E
Sbjct: 440 EHYGCMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFE 499
Query: 422 LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L+ + G YV+LSNIYA +W++VERIR ++K R + K P YS
Sbjct: 500 LDASNSGYYVLLSNIYAEARMWKDVERIRLLVKTRRIEKPPGYS 543
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I LY + +A+ +Y M G+ + L VL A A++ G+++H+
Sbjct: 268 WNSMIALYAQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKRIHNQ 327
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
VR+GLE N + + + +YSK G E A + F + E+ + SW+A+I G GR +EA
Sbjct: 328 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEA 387
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLN 263
+++F +K+ G P+ +T +SV +AC G L+ +Y + ++ ++
Sbjct: 388 LEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEG----RYWYNAMKQEFGIEAGVEHYG 443
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G +D AY + E+ +P+ + W +++
Sbjct: 444 CMVDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALL 478
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 220/377 (58%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I ++TR P++AL +++ M G++PD Y+L L A + ++G Q+H +
Sbjct: 569 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 628
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G N+F ++ I +Y+K G A K+F++ E+ L +WN++I G SQ+G + EAI
Sbjct: 629 KTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAIT 687
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + D +T +SV AC LG LE VH + + + D+ + +L DM
Sbjct: 688 LFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKL--IMYGLRKDSYLDTALTDM 745
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A+ VF + + ++ SW+ MI GY +G N + F+ M SGI+PN +TF
Sbjct: 746 YSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITF 805
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +LSAC H G V+EGK +F M + +EP+ H+ CMVDLL RAG L A ++ +P
Sbjct: 806 MHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLP 864
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN IWG L+ C + + + + K+L +++ G Y +LSNIYA G W++ +
Sbjct: 865 FPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGK 924
Query: 449 IRAVMKHRNLAKIPAYS 465
+R++MK + L K+P YS
Sbjct: 925 VRSMMKSKGLRKVPGYS 941
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 166/316 (52%), Gaps = 14/316 (4%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR--------QLHSLAVRLGLESN 155
+ LD++ M V PD T+ V +A +L +L +GR +H +R ++
Sbjct: 474 EGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPE 533
Query: 156 -EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
+F + LY+ G+ KVF+ E+ + SWN +I+ +++G+ +EA+ +F+ ++
Sbjct: 534 LDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQ 593
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
G PD ++ S SACG++ +L Q+H Y+ +K+ +D + N+LIDMY KCG
Sbjct: 594 TQGLMPDSYSLASSLSACGTISFSQLGAQIHGYI--IKTGNFND-FVQNALIDMYAKCGF 650
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A K+F +I + ++ +W SMI G++ NG + EA+ F M + ++ + +TF+ V+ A
Sbjct: 651 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 710
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G +++GK + +Y + + D+ + G L+ A + + M ++ +V
Sbjct: 711 CSHLGYLEKGKWVHHKLI-MYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS-IV 768
Query: 395 IWGCLMGACEKFGNVK 410
W ++ G +
Sbjct: 769 SWSVMIAGYGMHGQIN 784
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 79/323 (24%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII------- 194
QLH+ GL + + I Y++ G FE +++VFD P+ W +I
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425
Query: 195 --------------------------------AGLS------QDGRAKEAIDMFIGLKKC 216
+G ++G+A E +DMF +
Sbjct: 426 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE 485
Query: 217 GFEPDDVTMVSVTSACGSLGDLEL--------ALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
EPD VTM+SVT AC LG L L VH +V + + D + +L+++
Sbjct: 486 AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELD-FLGPALMEL 544
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y G + +KVF I + + SW ++I + NG EAL F M+ G+ P+ +
Sbjct: 545 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
LSAC +HG ++ G +F + ++N ++D+ + G +
Sbjct: 605 ASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNA------------LIDMYAKCGFV 651
Query: 378 EEARAMVEGMPMKANVVIWGCLM 400
A M E + K+ +V W ++
Sbjct: 652 HSANKMFEKIKEKS-LVTWNSMI 673
>gi|45935146|gb|AAS79604.1| putative pentatricopeptide repeat-containing protein [Ipomoea
trifida]
gi|118562903|dbj|BAF37793.1| hypothetical protein [Ipomoea trifida]
Length = 575
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 232/402 (57%), Gaps = 16/402 (3%)
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM------SRAGVLPDCYTLPI 126
HI+RT LH+ +F++N +IR Y+ P +A ++++M S A PD +T P
Sbjct: 50 HILRT--LHT-PNSFYYNTMIRAYSDSTDPTRAFTLFLYMQNPDDASVAVPRPDHFTYPF 106
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VLKA + G+Q+H L + G+ S+ + + I LYS +G+ A KVFD+ P+R
Sbjct: 107 VLKACSKSGHARFGKQIHGLVFKSGVGSDRYINNALIHLYSVSGEPNLAYKVFDKMPDRD 166
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW +II G + R EAI +F + + G EP++VT+ SV AC G L ++H
Sbjct: 167 VVSWTSIIDGFVDNDRPIEAIRLFTHMIENGIEPNEVTVASVLRACADTGALNTGERIHS 226
Query: 247 YVFQVKSKQ-KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
+ VK K S+ + +LIDMY KCG +D A +VF E + +V WT++I G A++GL
Sbjct: 227 F---VKEKNFSSNANVSTALIDMYAKCGCIDGALEVFDETLEKDVYVWTAIIAGLASHGL 283
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+A++ F M++S ++ + VLSA + G V EG FF +K ++I+P HYG
Sbjct: 284 CMKAIEFFENMKKSDVKMDERAITAVLSAYRNAGLVSEGLLFFRRLKK-HKIKPTIQHYG 342
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ--ELE 423
C+VD+L RAG L++A + MP++ + V+W L+ C+ G+V+ E + + L+ ++
Sbjct: 343 CVVDMLTRAGRLKDAEEFIRKMPIEPDAVLWRTLIWGCKILGDVERSERLVRELELLNMD 402
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+YV+L N+YA+ G WEE + R +M R L K PA S
Sbjct: 403 SRDTGSYVLLENVYAATGKWEEKAKTRELMYQRGLMKPPACS 444
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/418 (38%), Positives = 224/418 (53%), Gaps = 39/418 (9%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFAL---EIG 140
S W + I L +R +A + M AGV P+ T I L + C F+ G
Sbjct: 30 STTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITF-IALLSGCGDFSSGSESFG 88
Query: 141 RQLHSLAVRLGLESNE-FCESGFISLYSKAGDFEKAR----------------------- 176
LH A +LGL+ N + I +YSK G KAR
Sbjct: 89 DLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGYMR 148
Query: 177 --------KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
K+FDE PER L SW A+I G + G +EA+ F ++ G EPD V +++V
Sbjct: 149 KGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAIIAV 208
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
+AC +LG L L VH+Y+ V +++ + NS ID++ +CG ++LA VF +++
Sbjct: 209 LAACTNLGALSFGLWVHRYL--VSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHMEKR 266
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
V SW S+IV ++ANG A+E+L F M+E G +PN VTF G L+AC H G V+EG +F
Sbjct: 267 TVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLRYF 326
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG- 407
+ MK Y+I PR HYGC+VDL RAG LE+A +V+ MPMK N V+ G L+ AC G
Sbjct: 327 QTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTHGN 386
Query: 408 NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
N + E + KHL + S YV+LSN+YA+ G WE ++R MK L K P +S
Sbjct: 387 NTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 444
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 184/304 (60%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ + G AR+VFD PE SW A+I G ++GR EAID F + G EPD
Sbjct: 143 MITGLMRNGLVAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPD 202
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
VT+V+ SAC +G L L + VH+ V + + + + + NSLIDMY +CG+++ A +V
Sbjct: 203 YVTLVAAISACAEVGALGLGMWVHRLV--TRERLEGNIRIANSLIDMYARCGQVEFARQV 260
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + V SW SMIVG+AANG +A++ F MR G RP+ VTF GVL+AC H G
Sbjct: 261 FDSMRNRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAGLT 320
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG +++ M+ + I R HYGC+VDLLGRAG L EA ++V MPM+ N V+ G L+
Sbjct: 321 DEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGEAMSVVATMPMRPNEVVLGALLA 380
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
C G+V M E + +HL E +P D YV+LSNIYA+ G W+ ++R +MK R + K
Sbjct: 381 GCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLMKARGVKKR 440
Query: 462 PAYS 465
P S
Sbjct: 441 PGRS 444
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 4/249 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +A+D + M GV PD TL + A ++ AL +G +H L
Sbjct: 171 WTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVT 230
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R LE N + I +Y++ G E AR+VFD R + SWN++I G + +GR +AI+
Sbjct: 231 RERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNRTVVSWNSMIVGFAANGRCTDAIE 290
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ GF PD VT V +AC G + L+ +K + + + ++D+
Sbjct: 291 HFEAMRRKGFRPDAVTFTGVLTACSHAGLTDEGLRYYK-AMRAEHGITARMEHYGCVVDL 349
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYM--RESGIRPNH 325
G+ GR+ A V + +PN +++ G +G + A ++ ++ G N+
Sbjct: 350 LGRAGRLGEAMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHLLEQDPGGDSNY 409
Query: 326 VTFVGVLSA 334
V + +A
Sbjct: 410 VLLSNIYAA 418
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 36/246 (14%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGS------------ 234
SW A IA +++G + P+DVT+++V SAC
Sbjct: 33 SWTAAIARPAREGDLPATAAALSAMLSSPAAPAPNDVTLLTVLSACAGAPSSPLARPLAL 92
Query: 235 -------------------LGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGR 274
L LA ++ Q+ +L+ N++I + G
Sbjct: 93 SLHALAAKLFPSHLLLCTCLARFYLASRLPHLALQLFGSMTVRSLVTYNTMITGLMRNGL 152
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ A +VF + +P+ SWT++I G NG +EA+DCFH M G+ P++VT V +SA
Sbjct: 153 VAAAREVFDGMPEPDKVSWTALIDGCVKNGRHDEAIDCFHAMLLDGVEPDYVTLVAAISA 212
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C G + G ++ ++E ++D+ R G +E AR + + M + VV
Sbjct: 213 CAEVGALGLGMWVHRLVTR-ERLEGNIRIANSLIDMYARCGQVEFARQVFDSMRNR-TVV 270
Query: 395 IWGCLM 400
W ++
Sbjct: 271 SWNSMI 276
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 244/464 (52%), Gaps = 23/464 (4%)
Query: 13 LRMKSSHPLLHRLCKTHTFRKHVTISAAS--SFLDTHEDPAKIVATQLSKCT-------N 63
L K PLL L + R + AA+ S L H PA +V L+ CT +
Sbjct: 14 LPAKPKGPLLPHLPHCTSLRALAQLHAAAVKSGLGAH--PA-LVTRLLTLCTKQGAAPAH 70
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL-EAPKKALDIYIFMSRAGVLPDCY 122
L Q++ I + +N ++R Y R + +A + M GV PD Y
Sbjct: 71 LAYARQVFDRI------PTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTY 124
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T +LKA A E GRQ H +AV+ G +E+ I++Y++ GD AR +F
Sbjct: 125 TFVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRV 184
Query: 183 PERK-LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P + S+NA+I + R EA+ +F ++ G +P VT+ SV SAC LG LEL
Sbjct: 185 PNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLGALELG 244
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H+YV K+ S + +LIDMYGKCG ++ A VF ++ + +W+ MIV YA
Sbjct: 245 RWIHEYVR--KAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIVAYA 302
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+ EA+ F M++ GIRP+ VTF+GVL AC H G V EG +F+ M+ Y I P
Sbjct: 303 NHSYGREAISLFEEMKKQGIRPDAVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVPGI 361
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
HYGC+ DLL R+G LE+A ++ +P++ ++W L+ AC G V +G+ V + + E
Sbjct: 362 KHYGCVTDLLARSGQLEKAYKFIDELPIQPTAILWRTLLSACGSHGAVDLGKRVFERILE 421
Query: 422 LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L+ YV+ SN+ A+ G WEE+ R+R +M + + K+P S
Sbjct: 422 LDDTHGSDYVIFSNLCANTGKWEEMNRVRKLMNEKGVVKVPGCS 465
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 221/401 (55%), Gaps = 19/401 (4%)
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTR---LEAPKKALDIYIFMSRAGVLPDCYTLP 125
QI+ H+++T + F N +I LY +E + LD + R D +
Sbjct: 129 QIHGHVLKTGLGDDL---FIQNTLIHLYASCGCIEDARHLLDR--MLER-----DVVSWN 178
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
+L A + +E+ L +ES F SG++ + G E+AR+VF E P +
Sbjct: 179 ALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGV----GLLEEARRVFGETPVK 234
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+ SWNA+I G S GR E + +F ++ G +PD+ T+VSV SAC +G L VH
Sbjct: 235 NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVH 294
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
Y+ K+ D + +L+DMY KCG ++ A +VF + ++S+W S+I G + +G
Sbjct: 295 AYI--DKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGS 352
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
AL F M G +PN VTFV VLSAC G + EG+ F +M +V+ I+P HYG
Sbjct: 353 GQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYG 412
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW 425
CMVDLLGR GLLEEA +V+ MP K V+W L+GAC GNV++ E VA+ L EL P
Sbjct: 413 CMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQ 472
Query: 426 SDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
++V LSN+YAS G W++V +R M+ + + K P S+
Sbjct: 473 ESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCSM 513
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 201/484 (41%), Gaps = 119/484 (24%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA----------------------- 86
P + + T++ +L+Q +AHI+++ ++HS AA
Sbjct: 6 PPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIF 65
Query: 87 --------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
+ WN IIR Y P+ AL I+ M A VLPD YT LK+ +E
Sbjct: 66 SRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVE 125
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
GRQ+H ++ GL + F ++ I LY+ G E AR + D ER + SWNA+++ +
Sbjct: 126 EGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYA 185
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G + A +F D++T +V S
Sbjct: 186 ERGLMELACHLF----------DEMTERNVES---------------------------- 207
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
N +I Y G ++ A +VF E NV SW +MI GY+ G +E L F M+
Sbjct: 208 ---WNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQH 264
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+G++P++ T V VLSAC H G + +G+ H + + KN I+ A +VD+ + G
Sbjct: 265 AGVKPDNCTLVSVLSACAHVGALSQGEWVHAY-IDKNGISIDGFVA--TALVDMYSKCGS 321
Query: 377 LEEA------------------------------------RAMVEGMPMKANVVIWGCLM 400
+E+A +VEG K N V + C++
Sbjct: 322 IEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEG--FKPNEVTFVCVL 379
Query: 401 GACEKFGNVKMGEWVAK---HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
AC + G + G + H+ ++P + Y + ++ GL EE E + M +
Sbjct: 380 SACSRAGLLDEGREMFNLMVHVHGIQPTIE-HYGCMVDLLGRVGLLEEAEELVQKMPQKE 438
Query: 458 LAKI 461
+ +
Sbjct: 439 ASVV 442
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 212/380 (55%), Gaps = 3/380 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN I Y P++AL+++ M R + +TL L AS + L +G+++H
Sbjct: 185 FSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHG 244
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R L +E S + LY K G ++AR +FD+ +R + SW +I +DGR +E
Sbjct: 245 YLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREE 304
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+F L + G P++ T V +AC L +VH Y+ S +++L
Sbjct: 305 GFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGS--FAISAL 362
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG +A +VF E+ QP++ SWTS+IVGYA NG +EAL F + +SG +P+
Sbjct: 363 VHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQ 422
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VT+VGVLSAC H G V +G +F +K + + HY C++DLL R+G +EA +++
Sbjct: 423 VTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIID 482
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP+K + +W L+G C GN+++ + AK L E+EP + Y+ L+NIYA+ GLW E
Sbjct: 483 NMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSE 542
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R M + + K P S
Sbjct: 543 VANVRKDMDNMGIVKKPGKS 562
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 36/330 (10%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+ + + R P ++ A + ALE+GR++H+ F +
Sbjct: 69 KRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRL 128
Query: 163 ISLYSKAGD-------------------------------FEKARKVFDENPERKLGSWN 191
+ +Y+K G E+ARK+FDE P+R SWN
Sbjct: 129 LDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWN 188
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD-VTMVSVTSACGSLGDLELALQVHKYVFQ 250
A I+G + +EA+++F +++ + T+ S +A ++ L L ++H Y+
Sbjct: 189 AAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL-- 246
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++++ D ++ ++L+D+YGKCG +D A +F ++ +V SWT+MI +G E
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGF 306
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F + +SG+RPN TF GVL+AC GK M + FA +V +
Sbjct: 307 LLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFA-ISALVHM 365
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G AR + M + ++V W L+
Sbjct: 366 YSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 221/377 (58%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL ++ M G P+ +TL +LKAS + GRQLH+ ++
Sbjct: 174 WTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSL 233
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + N S + +Y++ +A+ +F+ + + SWNA+IAG ++ G + +
Sbjct: 234 KYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMR 293
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + GFEP T SV AC S G LE VH +V +KS + + N+LIDM
Sbjct: 294 LFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHV--IKSGGQPIAYIGNTLIDM 350
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A KVF + + ++ SW S+I GYA +GL EAL F M ++ ++PN +TF
Sbjct: 351 YAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITF 410
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG+++FE+MK ++IE + AH+ +VDLLGRAG L EA +E MP
Sbjct: 411 LSVLTACSHSGLLDEGQYYFELMKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP 469
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +WG L+GAC N+ +G + A+ + EL+P G +V+LSNIYAS G + +
Sbjct: 470 IKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAK 529
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK + K PA S
Sbjct: 530 VRKMMKESGVKKEPACS 546
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 221/382 (57%), Gaps = 7/382 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL-----KASCQLFALEIGRQL 143
WN++I + +++++++I + G+ PD +TL + KA L L+ G+Q+
Sbjct: 355 WNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQI 414
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+ A++ G +S+ SG + +Y K GD A VF+ +W ++I+G +G
Sbjct: 415 HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNE 474
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A+ ++ +++ PD+ T ++ A + LE Q+H V +K SD +
Sbjct: 475 DQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV--IKLDCVSDPFVGT 532
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SL+DMY KCG ++ AY++F +++ N++ W +M+VG A +G A EA++ F M+ GI P
Sbjct: 533 SLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEP 592
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ V+F+G+LSAC H G E + M N Y IEP HY C+VD LGRAGL++EA +
Sbjct: 593 DRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 652
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+E MP KA+ I L+GAC G+V+ G+ VA L LEP+ AYV+LSNIYA+ W
Sbjct: 653 IETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRW 712
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
++V R +MK +N+ K P +S
Sbjct: 713 DDVTDARKMMKRKNVKKDPGFS 734
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 24/325 (7%)
Query: 17 SSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIR 76
S+H LL C TH R V+ SA FL + + T SKC +L Q++
Sbjct: 89 STHNLLLGKC-THA-RIVVSGSAGDHFLSNN------LLTMYSKCGSLSSARQVFDTTPE 140
Query: 77 THMLHSYSAAFHWNNIIRLY-----TRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS 131
++ WN I+ Y + ++ L ++ + + TL VLK
Sbjct: 141 RDLVT-------WNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLC 193
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
L +H A+++GLE + F +++YSK G AR +FD ER + WN
Sbjct: 194 LNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWN 253
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC--GSLGDLELALQVHKYVF 249
++ G Q G KEA +F + G PD+ ++ + + C DLEL QVH
Sbjct: 254 MMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHG--I 311
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
VKS SD + NSL++MY K G A +VF ++ ++ SW SMI A + L E+
Sbjct: 312 AVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEES 371
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSA 334
++ F + G++P+H T + A
Sbjct: 372 VNLFIDLLHEGLKPDHFTLASITLA 396
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 19/290 (6%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ + L +G+ H+ V G + F + +++YSK G AR+VFD PER
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 187 LGSWNAIIAGL-----SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
L +WNAI+ S DG A+E + +F L+ +T+ V C + G L A
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
VH Y +K + D + +L+++Y KCGRM A +F + + +V W M+ GY
Sbjct: 203 EGVHGYA--IKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYV 260
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI---- 357
GL EA F SG+RP+ + +L+ C+ G E+ K V+ I
Sbjct: 261 QLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDD-----LELGKQVHGIAVKS 315
Query: 358 --EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ + +V++ + G AR + M +++ W ++ +C +
Sbjct: 316 GLDSDVSVANSLVNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISSCAQ 364
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 219/404 (54%), Gaps = 35/404 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + K+AL ++ M +GV+PD L VL A + L IG+ +HS +
Sbjct: 219 WGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYML 278
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA-------------------------------RK 177
+ S ISLY+ + E A R
Sbjct: 279 VSDMIIGAHISSALISLYASCANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARS 338
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD PE+ + SW+A+I+G + EA+ +F G+++CG D++TM+SV SAC +LG
Sbjct: 339 IFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGS 398
Query: 238 LELALQVHKYVFQVKSKQKSDTL-MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+ A +H ++ K+ + L + N+LIDM+ KCG ++LA VF E+ NV +WTSM
Sbjct: 399 LDKAKWIHAFI---KNSGLNKVLHICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSM 455
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I +A +G +L F M++ G PN VTF+ +L AC H G V EG+ F M Y
Sbjct: 456 ISAFAMHGDGKSSLRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYG 515
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEP+ HYGCMVDLLGRA L++EA +++E M ++ NV IWG L+ AC G++K+G + A
Sbjct: 516 IEPKHEHYGCMVDLLGRAKLMQEAVSLIESMHLEPNVPIWGSLLAACWMHGDLKLGAFAA 575
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
K + +L+P DGA V+L IY + +R VMK ++K
Sbjct: 576 KKILQLDPNHDGASVLLLKIYMKSDNLNNAQEVRGVMKLHRVSK 619
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 151/343 (44%), Gaps = 39/343 (11%)
Query: 102 PKKALDIYIFMSRAGV-LPDCYTLPIVLK--ASCQLFALEIGRQLHSLAVRLGLESNEFC 158
P+ L + RAG+ P LP +L+ A C+ + H+LAVR G + F
Sbjct: 129 PRLVLAACACLRRAGLPAPGPRALPALLRSAARCEGAGAYVA-ATHALAVRTGALDDGFV 187
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+ Y+ G RKVFD R + SW ++ Q KEA+ +F +K G
Sbjct: 188 GTALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGV 247
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
PD + + +V ACG + L + +H Y+ S + ++LI +Y C M++A
Sbjct: 248 VPDQLILATVLPACGHIRHLRIGKAIHSYMLV--SDMIIGAHISSALISLYASCANMEMA 305
Query: 279 YKVFWE-------------------------------IDQPNVSSWTSMIVGYAANGLAN 307
K++ E + + +V SW++MI GY + N
Sbjct: 306 EKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPN 365
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
EAL F+ M+E GIR + +T + V+SAC + G + + K +KN + +
Sbjct: 366 EALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKN-SGLNKVLHICNAL 424
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+D+ + G + A + MP+K NV+ W ++ A G+ K
Sbjct: 425 IDMFAKCGGINLALNVFNEMPLK-NVITWTSMISAFAMHGDGK 466
>gi|224117814|ref|XP_002331638.1| predicted protein [Populus trichocarpa]
gi|222874034|gb|EEF11165.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 198/352 (56%), Gaps = 31/352 (8%)
Query: 144 HSLAVRLGLESNEFCESGFISLYSK--AGD--------------------------FEKA 175
H AV+ G+ S+ + + +S YSK GD FE A
Sbjct: 1 HCQAVKPGIFSHGYVANNILSRYSKCVVGDLNLACKLFDEMPHKDTVTLDTMITAYFESA 60
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
KVF+ PE+ + +WN++I G + +G+ EA+ ++ + G EPD TMVS+ SAC L
Sbjct: 61 YKVFELMPEKDIVAWNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAEL 120
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWT 294
L L + H V+ VK + N+L+D+Y KCG + A K+F E+ + NV SWT
Sbjct: 121 ATLVLGRRAH--VYMVKVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWT 178
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
S+IVG A NG EAL+ F M G+ P+ +TFVGVL AC H G V EG +F+ MK
Sbjct: 179 SLIVGLAVNGFGKEALEHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFKRMKEQ 238
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
Y I PR HYGCMVDLLGRAGLL+EA ++ MP++ N VIW L+GAC G++ +G +
Sbjct: 239 YDIVPRIEHYGCMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLLGACTIHGHLGLGAF 298
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
L +LEP G YV+LSN+YAS W +V +R M + K P YSL
Sbjct: 299 ARARLLQLEPKDSGDYVLLSNLYASEQRWSDVHEVRRTMLSEGVRKTPGYSL 350
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 11/215 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + P +AL +Y M GV PD +T+ +L A +L L +GR+ H V
Sbjct: 75 WNSVINGFALNGKPNEALTLYKRMGSEGVEPDGFTMVSLLSACAELATLVLGRRAHVYMV 134
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEAI 207
++GL N + + LY+K G +ARK+FDE ER + SW ++I GL+ +G KEA+
Sbjct: 135 KVGLNKNLHANNALLDLYAKCGTISEARKIFDEMGIERNVVSWTSLIVGLAVNGFGKEAL 194
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL----MLN 263
+ F +++ G P ++T V V AC G + + K + K++ D +
Sbjct: 195 EHFKDMEREGLVPSEITFVGVLYACSHCGIVNEGFEYFK-----RMKEQYDIVPRIEHYG 249
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G + AY ++ QPN W +++
Sbjct: 250 CMVDLLGRAGLLKEAYDYIQDMPLQPNAVIWRTLL 284
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/388 (38%), Positives = 217/388 (55%), Gaps = 13/388 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + L ++ M V P+ +TL L C + +L+IG Q+HSL +
Sbjct: 239 WTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTI 298
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG------LSQDGR 202
+LG ESN ++ + LY K G +A+K+FDE L +WNA+IAG ++D
Sbjct: 299 KLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDL 358
Query: 203 A-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
A EA+ +F+ L + G +PD T SV S C SL LE QVH +K+ S
Sbjct: 359 AAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQT--IKTGFLS 416
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D ++ +L++MY KCG ++ A K F E+ + SWTSMI GYA NG +AL F MR
Sbjct: 417 DVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMR 476
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+G+RPN +TFVGVLSAC H G V E +F+MMKN Y+I P HY C++D+ R G L
Sbjct: 477 LAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRL 536
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+EA ++ M ++ N IW L+ C G +++G + A+ L L+P Y +L N+Y
Sbjct: 537 DEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMY 596
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
S G W+EV R+R +MK L ++ +S
Sbjct: 597 LSAGKWKEVSRVRKMMKEEKLGRLKDWS 624
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 137/281 (48%), Gaps = 20/281 (7%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC + +++ + R +++ W ++ Y P+ A+ ++ M AG
Sbjct: 115 AKCGTMETARKVFDELPRRNVVS-------WTTLMTGYVHDSKPELAVQVFREMLEAGAY 167
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P YTL L AS L + E+G+Q+H +++ +E + + SLYSK G E A K
Sbjct: 168 PTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKA 227
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F ++ + SW +I+ +G A + F+ + EP++ T+ S S C + L
Sbjct: 228 FRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSL 287
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
++ Q+H +K +S+ + NS++ +Y KCG + A K+F E++ ++ +W +MI
Sbjct: 288 DIGTQIHS--LTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIA 345
Query: 299 GY-----------AANGLANEALDCFHYMRESGIRPNHVTF 328
G+ AA+ EAL F + SG++P+ TF
Sbjct: 346 GHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 123/263 (46%), Gaps = 4/263 (1%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+++H+ V+ G + F + +++Y+K G E ARKVFDE P R + SW ++ G
Sbjct: 88 AQKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVH 147
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
D + + A+ +F + + G P + T+ + SA L EL Q+H Y +K + + D
Sbjct: 148 DSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGY--SIKYRIEFDA 205
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ NSL +Y KCG ++ A K F I NV SWT++I + NG A L F M
Sbjct: 206 SIGNSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSE 265
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+ PN T LS C + G + + E ++ L + G + E
Sbjct: 266 CVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKL-GFESNLPIKNSIMYLYLKCGWIHE 324
Query: 380 ARAMVEGMPMKANVVIWGCLMGA 402
A+ + + M ++V W ++
Sbjct: 325 AKKLFDEME-TISLVTWNAMIAG 346
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 215/379 (56%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK--ASCQLFALEIGRQLHSL 146
WN ++ Y P++A ++ M V D +T +L + L + G+Q+HSL
Sbjct: 236 WNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSL 295
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+R +S+ S I++Y+K+ + AR+VFDE R + +WN +I G G E
Sbjct: 296 VLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEV 355
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + + + GF PD++T+ S+ S+CG + LQVH F VK + + NSLI
Sbjct: 356 MKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVH--AFAVKLSCQDFLSVANSLI 413
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y KCG + A+K F QP++ +WTS+I YA +GLA ++ + F M GI+P+ +
Sbjct: 414 SAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRI 473
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F+GVLSAC H G V +G H+F++M N YQI P HY C+VDLLGR GL+ EA ++
Sbjct: 474 AFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRS 533
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + G +G+C+ N+++ + A+ L +EP Y V+SNI+AS+ W +V
Sbjct: 534 MPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDV 593
Query: 447 ERIRAVMKHRNLAKIPAYS 465
ERIR M+ + AK+P S
Sbjct: 594 ERIRKTMEDKRDAKVPGCS 612
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 4/229 (1%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
++PD T ++ Q +E+G QLH V++G + + F + LY+K G E AR
Sbjct: 163 MVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENAR 222
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG--S 234
+VF + R L WN +++ + +EA +F ++ D+ T S+ S +
Sbjct: 223 RVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDA 282
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L + QVH V ++ SD L+ ++LI+MY K + A +VF E+ NV +W
Sbjct: 283 LEYYDFGKQVHSLV--LRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWN 340
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+MIVG+ +G NE + M G P+ +T ++S+C + + E
Sbjct: 341 TMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITE 389
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 156/351 (44%), Gaps = 40/351 (11%)
Query: 89 WNNIIRLYTRLEAPKKAL-----DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
WN+ RL + P + +++F S A LK S + L G+QL
Sbjct: 35 WNSSSRLRASMPIPNQTHFNDPNTVHLFCSNA------------LKISAKKGYLPEGKQL 82
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H+ ++ G ++ +S+Y K + E A+K+F+E P R + SWN +I
Sbjct: 83 HAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDE 142
Query: 204 KEAIDM---FIGLKKCGFE---PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
E+ M F ++ E PD +T + C D+E+ +Q+H F VK
Sbjct: 143 NESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQLH--CFTVKVGFDL 200
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D + +L+ +Y KCG ++ A +VF ++ ++ W M+ Y N L EA F+ MR
Sbjct: 201 DCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMR 260
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH------YGCMVDLL 371
+ + TF +LS + +++ K V+ + R + ++++
Sbjct: 261 LDVVNGDEFTFSSLLSVI-----SDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMY 315
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
++ + +AR + + M ++ NVV W ++ FGN G V K ++E+
Sbjct: 316 AKSENIIDARRVFDEMSIR-NVVAWNTMIVG---FGNHGDGNEVMKLVKEM 362
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 211/377 (55%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + P AL + M R G P+ +TL V+KA+ G QLH V
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +SN S + LY++ G + A+ VFD R SWNA+IAG ++ ++A++
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + GF P + S+ AC S G LE VH Y+ +KS +K N+L+DM
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM--IKSGEKLVAFAGNTLLDM 306
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F + + +V SW S++ YA +G EA+ F MR GIRPN ++F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG H++E+MK I P HY +VDLLGRAG L A +E MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IW L+ AC N ++G + A+H+ EL+P G +V+L NIYAS G W + R
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + K PA S
Sbjct: 486 VRKKMKESGVKKEPACS 502
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 5/289 (1%)
Query: 127 VLKASCQLFALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
L C +F L I GR +H+ ++ + + +++Y+K G E+ARKVF++ P+R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+W +I+G SQ R +A+ F + + G+ P++ T+ SV A + Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
F VK S+ + ++L+D+Y + G MD A VF ++ N SW ++I G+A
Sbjct: 185 G--FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+AL+ F M G RP+H ++ + AC G +++GK M + FA
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-N 301
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
++D+ ++G + +AR + + + K +VV W L+ A + G K W
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVW 349
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH ++ Q S + D +M N+L++MY KCG ++ A KVF ++ Q + +WT++I GY+ +
Sbjct: 82 VHAHILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMK 352
+AL F+ M G PN T V+ A +HG V+ G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-----FDS 194
Query: 353 NVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM-GACEKFGNVK 410
NV H G ++DL R GL+++A+ + + + + N V W L+ G + G K
Sbjct: 195 NV--------HVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNALIAGHARRSGTEK 245
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRL 470
E L++ S +Y L +S G E+ + + A M ++ K+ A++ T L
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI-KSGEKLVAFAGNTLL 304
Query: 471 D 471
D
Sbjct: 305 D 305
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 227/415 (54%), Gaps = 9/415 (2%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + KC L++ I+ + R A WN II + + E K L +++
Sbjct: 378 ANTILDMYGKCGALVEACTIFDDMERRD-------AVSWNAIIAAHEQNEEIVKTLSLFV 430
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M R+ + PD +T V+KA AL G ++H V+ G+ + F S + +Y K G
Sbjct: 431 SMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCG 490
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+A K+ D E+ SWN+II+G S +++ A F + + G PD+ T +V
Sbjct: 491 MLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLD 550
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C ++ +EL Q+H + +K SD + ++L+DMY KCG M + +F + + +
Sbjct: 551 VCANMATIELGKQIHAQI--LKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDY 608
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+W++MI YA +G +A+ F M+ ++PNH F+ VL AC H G V +G H+F++
Sbjct: 609 VTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQI 668
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M++ Y ++P HY CMVDLLGR+ + EA ++E M +A+ VIW L+ C+ GNV+
Sbjct: 669 MQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVE 728
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ E L +L+P AYV+L+N+YA+ G+W EV +IR++MK+ L K P S
Sbjct: 729 VAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCS 783
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 163/328 (49%), Gaps = 26/328 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ Y +K+++I++ M + D T +VLKA + +G Q+H LA+
Sbjct: 106 WNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAI 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G E++ S + +YSK + A ++F E PER L W+A+IAG Q+ R E +
Sbjct: 166 QMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLK 225
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G T SV +C L +L Q+H + +KS D+++ + +DM
Sbjct: 226 LFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHA--LKSDFAYDSIIGTATLDM 283
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC RM A+KVF + P S+ ++IVGYA +AL+ F ++ + + + ++
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 329 VGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G L+AC +HG V+ G F + N ++D+ G+ G L
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANT------------ILDMYGKCGAL 391
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEK 405
EA + + M + + V W ++ A E+
Sbjct: 392 VEACTIFDDME-RRDAVSWNAIIAAHEQ 418
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 9/336 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N II Y R + KAL+I+ + R + D +L L A + G QLH LAV
Sbjct: 308 YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAV 367
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL N + + +Y K G +A +FD+ R SWNAIIA Q+ + +
Sbjct: 368 KCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLS 427
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + EPDD T SV AC L +++H + VKS D + ++L+DM
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRI--VKSGMGLDWFVGSALVDM 485
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG + A K+ +++ SW S+I G+++ + A F M E G+ P++ T+
Sbjct: 486 YGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTY 545
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL C + ++ GK +++K + A +VD+ + G ++++R M E
Sbjct: 546 ATVLDVCANMATIELGKQIHAQILKLNLHSDVYIA--STLVDMYSKCGNMQDSRLMFEKT 603
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
P K + V W ++ A G+ GE K +E++
Sbjct: 604 P-KRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQ 635
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
+T +L+ L AL G+Q H+ + + + + Y K+ + A KVFD
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 182 NPERKLGSWNAIIAGLSQ-------------------------------DGRAKEAIDMF 210
P R + SWN +I G ++ +G +++I++F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 211 IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
+ ++ D T V AC + D L LQVH Q+ ++D + ++L+DMY
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGF--ENDVVTGSALVDMYS 184
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
KC ++D A+++F E+ + N+ W+++I GY N E L F M + G+ + T+
Sbjct: 185 KCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244
Query: 331 VLSAC 335
V +C
Sbjct: 245 VFRSC 249
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 246 KYVFQVKSKQK-SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
Y F+V + D + N++I Y + G M A +F + + +V SW S++ Y NG
Sbjct: 58 NYAFKVFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNG 117
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKN 353
+ ++++ F MR I ++ TF VL AC VH +Q G
Sbjct: 118 VNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMG--------- 168
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
E +VD+ + L+ A + MP + N+V W ++
Sbjct: 169 ---FENDVVTGSALVDMYSKCKKLDGAFRIFREMPER-NLVCWSAVIAG 213
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T + C +L L Q H + + + + N L+ Y K M+ A+KVF
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQM--IVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ +V SW +MI GYA G A F M E + V++ +LS +H G ++
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDV----VSWNSLLSCYLHNGVNRK 121
Query: 344 GKHFFEMMKNV 354
F M+++
Sbjct: 122 SIEIFVRMRSL 132
>gi|414870414|tpg|DAA48971.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 611
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 215/394 (54%), Gaps = 14/394 (3%)
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC 132
H+ H L S F N+I+R L P AL + G + +TL I+LK C
Sbjct: 96 HLTTPHYLPS---TFQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKPRC 149
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
+L RQLH+ V G + + + Y+ GD + ARK+FDE P R +WN
Sbjct: 150 ---SLAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNV 206
Query: 193 IIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+I +++ R K+A+ +F + K EPDDVT + + AC SLG L+ QV + +
Sbjct: 207 LITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQV--WAYA 264
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ + + NSLI MY +CG +D AY+VF Q +V +WT+MI G AANG N+A+
Sbjct: 265 EEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAI 324
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F M S + P+ TF GVLSAC H G V EG FF+MM+ Y ++P HYGC+VDL
Sbjct: 325 SVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDL 384
Query: 371 LGRAGLLEEARAMVEG-MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+GRAGLL+EA V M + + IW L+GAC G+V +GE V +L EL+ G
Sbjct: 385 MGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGD 444
Query: 430 YVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
YV+L N YA+ G W +V IR +M+ + P
Sbjct: 445 YVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPG 478
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/388 (36%), Positives = 229/388 (59%), Gaps = 8/388 (2%)
Query: 89 WNNIIRLYTRLEAP-KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN+I+ + +AP +++ ++ M ++G++P+ T L A L LE+G+Q+HS+
Sbjct: 553 WNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVM 612
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG-SWNAIIAGLSQDGRAKEA 206
++ G+ + ++ +S Y+K+GD + ++F R+ SWN++I+G +G +EA
Sbjct: 613 LKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEA 672
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+D + D T V +AC S+ LE +++H F ++S +SD ++ ++L+
Sbjct: 673 MDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMH--AFGLRSHLESDVVVESALV 730
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCGR+D A KVF + Q N SW SMI GYA +GL +AL+ F M+ESG P+HV
Sbjct: 731 DMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHV 790
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV VLSAC H G V+ G +FE+M++ Y I PR HY C++DLLGRAG L++ + ++
Sbjct: 791 TFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKR 849
Query: 387 MPMKANVVIWGCLMGACEKF---GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
MPMK N +IW ++ AC++ + +G ++ L ELEP + YV+ S +A+ G W
Sbjct: 850 MPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRW 909
Query: 444 EEVERIRAVMKHRNLAKIPAYSLATRLD 471
E+ + RA MK + K S T D
Sbjct: 910 EDTAKARAAMKGAAVKKEAGRSWVTLTD 937
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 10/337 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II + + A+ Y M + + P + L + L L G+QLH AV
Sbjct: 452 WNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAV 511
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL-SQDGRAKEAI 207
+ GL + + + +Y + G + ++F+ + SWN+I+ + S E++
Sbjct: 512 KWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESV 571
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K G P+ VT V+ +A L LEL Q+H + +K D + N+L+
Sbjct: 572 QVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVM--LKHGVTEDNAVDNALMS 629
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y K G +D ++F + + + SW SMI GY NG EA+DC M S +H
Sbjct: 630 CYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHC 689
Query: 327 TFVGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF VL+AC ++ G H F + + +E +VD+ + G ++ A +
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSH---LESDVVVESALVDMYSKCGRIDYASKVF 746
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE 421
M K N W ++ + G + + + +QE
Sbjct: 747 HSMSQK-NEFSWNSMISGYARHGLGRKALEIFEEMQE 782
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 171/385 (44%), Gaps = 45/385 (11%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--- 109
I AT LS C+ L L+Q++ ++++ S + + ++ + R +A DIY
Sbjct: 284 ITATYLSSCS-LGLLDQLFVRVLKSG---CSSDLYVGSALVSAFARHGMLDEAKDIYLGL 339
Query: 110 --------------------------IFM---SRAGVLPDCYT--LPIVLKASCQLFALE 138
IFM A V D Y L + + S L
Sbjct: 340 KERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLR 399
Query: 139 IGRQLHSLAVRLGLESNEFCES-GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
GR++H+ +R G + S G +++Y+K G +KA +VF R SWN II L
Sbjct: 400 KGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITAL 459
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
Q+G + A+ + +++ P + +S S+C LG L Q+H VK
Sbjct: 460 DQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLH--CDAVKWGLYL 517
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA--NEALDCFHY 315
DT + N+L+ MYG+CGRM +++F + +V SW S I+G A+ A E++ F
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSN 576
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M +SG+ PN VTFV L+A ++ GK +M + + A ++ ++G
Sbjct: 577 MMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLK-HGVTEDNAVDNALMSCYAKSG 635
Query: 376 LLEEARAMVEGMPMKANVVIWGCLM 400
++ + M + + + W ++
Sbjct: 636 DVDSCERLFSRMSGRRDAISWNSMI 660
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 3/214 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN++I Y ++A+D M + + D T IVL A + ALE G ++H+
Sbjct: 653 AISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHA 712
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R LES+ ES + +YSK G + A KVF ++ SWN++I+G ++ G ++
Sbjct: 713 FGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRK 772
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++F +++ G PD VT VSV SAC G +E L + + + + + +
Sbjct: 773 ALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIE--HYSCV 830
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIV 298
ID+ G+ G +D + + +PN W +++V
Sbjct: 831 IDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLV 864
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
LH V+ GL + F + ++ Y+K + AR+VFD P R SW +I+G G
Sbjct: 87 LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146
Query: 203 AKEAIDMFIGLKK--CGFEPDDVTMVSVTSACGSLGD--LELALQVHKYVFQVKSKQKSD 258
++A +F + + G P T SV AC G L A+QVH V K++ S+
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLV--SKTEFTSN 204
Query: 259 TLMLNSLIDMYGKC--GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
T + N+LI MYG C G LA +VF ++ +W +++ YA G A F M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Query: 317 R--ESGI--RPNHVTFVGV-----LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+ +SGI RP TF + LS+C G + Q+ R GC
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCSLG--------------LLDQLFVRVLKSGCS 310
Query: 368 VDL---------LGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
DL R G+L+EA+ + G+ + V + G + G
Sbjct: 311 SDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAG 353
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 129/277 (46%), Gaps = 13/277 (4%)
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
+SC L L+ QL ++ G S+ + S +S +++ G ++A+ ++ ER +
Sbjct: 290 SSCSLGLLD---QLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVT 346
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL----QVH 245
N +IAGL + + A ++F+G + D T V + SA E L +VH
Sbjct: 347 LNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVD-TYVVLLSAIAEFSTAEQGLRKGREVH 405
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
+V + + + N L++MY KCG +D A +VF ++ + SW ++I NG
Sbjct: 406 AHVLRAGHIYRKIAVS-NGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGY 464
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHY 364
A+ + MR++ I P++ + LS+C G + G+ + +K ++ ++
Sbjct: 465 CEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSN- 523
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+V + G G + E + M +VV W +MG
Sbjct: 524 -ALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMG 558
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 32/392 (8%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+ +Y M +LPD Y + +LKA AL GR++HS A++LG SN +
Sbjct: 130 EAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIM 189
Query: 164 SLYSKAGDFEKARKVFDENPERKLGS------------------------------WNAI 193
LY K G+ AR+VF+E PE + S W A+
Sbjct: 190 ELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAM 249
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I G ++ A++ F G++ P++ T+V V SAC LG LE+ VH Y+ K
Sbjct: 250 IDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM--RKF 307
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ + + + N+LI+MY +CG +D A VF E+ +V ++ +MI G + NG + +A++ F
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M +RP +VTFVGVL+AC HGG V G F M Y++EP+ HYGCMVDLLGR
Sbjct: 368 RVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGR 427
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVL 433
G LEEA ++ M M + ++ G L+ AC+ N+++GE VAK L++ G YV+L
Sbjct: 428 VGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLL 487
Query: 434 SNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
S++YAS G W+E ++RA MK + K P S
Sbjct: 488 SHVYASSGKWKEAAQVRAKMKEAGMQKEPGCS 519
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 109/195 (55%), Gaps = 3/195 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R E +AL+ + M V P+ +T+ VL A QL ALEIGR +HS
Sbjct: 246 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N F + I++YS+ G ++A+ VFDE +R + ++N +I+GLS +G++++AI+
Sbjct: 306 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 365
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV-HKYVFQVKSKQKSDTLMLNSLID 267
+F + P +VT V V +AC G ++ ++ H + + + + ++D
Sbjct: 366 LFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEH--YGCMVD 423
Query: 268 MYGKCGRMDLAYKVF 282
+ G+ GR++ AY +
Sbjct: 424 LLGRVGRLEEAYDLI 438
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 34/290 (11%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ +R G + F + SK + A ++F + + A+I G G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
EAI ++ + PD+ M S+ ACGS L +VH ++ S+ L+
Sbjct: 128 YLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGF--SSNRLVR 185
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSS------------------------------ 292
++++YGKCG + A +VF E+ + V+S
Sbjct: 186 LRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
WT+MI G+ N N AL+ F M+ +RPN T V VLSAC G ++ G+ M+
Sbjct: 246 WTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++IE ++++ R G ++EA+ + + M + +V+ + ++
Sbjct: 306 K-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMISG 353
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 223/384 (58%), Gaps = 10/384 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM---SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN ++ Y ++AL+++ M SR+ PD ++ I ++A L LE GR++H
Sbjct: 100 WNAMMTNYKLDGRDREALELFREMCERSRSA-RPDKFSFSIAIEACSNLEDLEQGREIHE 158
Query: 146 LAVRLG--LESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGR 202
+ R G L + + +++YSK GD E+ARKVFD + WNA+IA +Q GR
Sbjct: 159 MLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGR 218
Query: 203 AKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
K+A+D++ + P T V+V C L L+ +H V + ++ L+
Sbjct: 219 GKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRA--TNFDANLLV 276
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L+ MYGKCG +D A VF + + SW ++I YA +G +++AL + M G+
Sbjct: 277 SNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGV 336
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+P VTFVG+LSAC HGG V +G +F M++ ++I+P H+GC++DLLGR G L EA
Sbjct: 337 KPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAE 396
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+++ MP++AN V W L+GAC+ G++K G A + + PW+ G YV+LSNIYA+ G
Sbjct: 397 LVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAG 456
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W++VE+IR +M R + K P S
Sbjct: 457 RWKDVEKIRKIMAARGVKKSPGKS 480
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 7/296 (2%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI--GRQLHSLAVRLGLESNEFCESG 161
+AL + M ++G PD T ++L A Q+ A I GR++H A GL N +
Sbjct: 12 EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFE 219
IS+Y K G + AR F+E + +WNA++ DGR +EA+++F + +
Sbjct: 72 VISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMCERSRSAR 131
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD + AC +L DLE ++H+ + + + D ++ +L++MY KCG ++ A
Sbjct: 132 PDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEAR 191
Query: 280 KVFWEIDQPNVS-SWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVH 337
KVF I S W +MI YA +G +ALD + M + + + P TFV V+ C
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+++G+ ++ + +V + G+ G L+EA + M +K +
Sbjct: 252 LSALKQGRAIHARVRAT-NFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEI 306
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 19/277 (6%)
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT--MVSVTSACGSLGDLELALQVHKYVFQV 251
+A S +G EA+ F + + G PD VT ++ A ++ ++H+Y
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYAR-- 58
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
S + ++ ++I MYGKCGR+D A F E+ N +W +M+ Y +G EAL+
Sbjct: 59 ISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALE 118
Query: 312 CFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV- 368
F M R RP+ +F + AC + +++G+ EM++ E + H +V
Sbjct: 119 LFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRR----EGKELHKDVVVG 174
Query: 369 ----DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ---E 421
++ + G LEEAR + + + A+ V W ++ A + G K + + + +
Sbjct: 175 TALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTD 234
Query: 422 LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L P G +V + ++ A ++ I A ++ N
Sbjct: 235 LAP-KQGTFVTVIDVCAELSALKQGRAIHARVRATNF 270
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 226/413 (54%), Gaps = 39/413 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHS 145
W + I L TR +A + M +GV P+ T I L + C F + + LH
Sbjct: 30 WTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITF-IALLSGCGDFPSGSETLSNLLHG 88
Query: 146 LAVRLGLE-SNEFCESGFISLYSKAGDFEKAR---------------------------- 176
A +LGL+ ++ + I +YSK G +KAR
Sbjct: 89 YACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVD 148
Query: 177 ---KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
K+FD+ PER L SW A+I G + G +EA+ F ++ G PD V +++ +AC
Sbjct: 149 NAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACT 208
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+LG L L VH+YV + K++ + NSLID+Y +CG ++ A +VF ++++ V SW
Sbjct: 209 NLGALSFGLWVHRYV--MNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSW 266
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+IVG+AANG A+E+L F M+E G +P+ VTF G L+AC H G V+EG +F+ MK
Sbjct: 267 NSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 326
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMG 412
Y I PR HYGC+VDL RAG LE+A ++E MPMK N V+ G L+ AC G N +
Sbjct: 327 DYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLA 386
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E + KHL +L S YV+LSN+YA+ G WE ++R MK L K P +S
Sbjct: 387 ERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFS 439
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 47/305 (15%)
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL--GDLELALQVHK 246
SW + I L+++GR EA F ++ G EP+ +T +++ S CG G L+ +H
Sbjct: 29 SWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSNLLHG 88
Query: 247 Y----------------VFQVKSK--------------QKSDTLMLNSLIDMYGKCGRMD 276
Y + + SK + +++ N++ID Y + G++D
Sbjct: 89 YACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQVD 148
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A K+F ++ + ++ SWT+MI G+ G EAL F M+ SG+RP++V + L+AC
Sbjct: 149 NAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACT 208
Query: 337 HGGKVQEG--KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
+ G + G H + M ++ ++ R ++ ++DL R G +E AR + + M K VV
Sbjct: 209 NLGALSFGLWVHRYVMNQD-FKNNVRVSN--SLIDLYCRCGCVEFAREVFDKME-KRTVV 264
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQE--LEPWS---DGAYVVLSNIYASRGLWEEVERI 449
W ++ GN + +QE +P + GA S++ GL EE R
Sbjct: 265 SWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHV----GLVEEGLRY 320
Query: 450 RAVMK 454
MK
Sbjct: 321 FQTMK 325
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/424 (35%), Positives = 224/424 (52%), Gaps = 9/424 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD++ + T SK L + +I+ H L WN+++ Y +
Sbjct: 169 LDSYVSVGNALITSYSKNGFLKEARRIF------HWLSEDRDEVSWNSMVVAYMQHREGS 222
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KAL++Y+ M+ G++ D +TL VL A + L G Q H+ ++ G N SG I
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 164 SLYSKAGD-FEKARKVFDENPERKLGSWNAIIAGLS-QDGRAKEAIDMFIGLKKCGFEPD 221
LYSK G RKVFDE L WN +I+G S + + EA++ F L+ G PD
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPD 342
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
D ++V V SAC ++ QVH ++ ++ N+LI MY KCG + A +
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVN-NALIAMYSKCGNLRDAKTL 401
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + N S+ SMI GYA +G+ ++L F M E G P ++TF+ VL+AC H G+V
Sbjct: 402 FDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRV 461
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
++GK +F MMK + IEP H+ CM+DLLGRAG L EA ++E +P W L+G
Sbjct: 462 EDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLG 521
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC GNV++ A L +L+P + YV+L+NIY+ G ++ +R +M+ R + K
Sbjct: 522 ACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKK 581
Query: 462 PAYS 465
P S
Sbjct: 582 PGCS 585
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 166/324 (51%), Gaps = 12/324 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG--RQLHSL 146
+N +I Y R + A +++ M A + D +TL ++ A + +G RQLH+L
Sbjct: 108 YNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC----GINVGLIRQLHAL 163
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFD-ENPERKLGSWNAIIAGLSQDGRAKE 205
+V GL+S + I+ YSK G ++AR++F + +R SWN+++ Q +
Sbjct: 164 SVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK 223
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++++ + G D T+ SV +A ++ DL LQ H + +KS ++ + + L
Sbjct: 224 ALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKL--IKSGYHQNSHVGSGL 281
Query: 266 IDMYGKCGRMDL-AYKVFWEIDQPNVSSWTSMIVGYAA-NGLANEALDCFHYMRESGIRP 323
ID+Y KCG L KVF EI P++ W +MI GY+ L++EAL+CF ++ G RP
Sbjct: 282 IDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRP 341
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ + V V+SAC + +G+ + + R + ++ + + G L +A+ +
Sbjct: 342 DDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTL 401
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+ MP + N V + ++ + G
Sbjct: 402 FDTMP-EHNTVSYNSMIAGYAQHG 424
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + IS Y+K E A ++FDE P+ S+N +IA ++ G + A +F+
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+++ + D T+ + +ACG ++ L Q+H V + S + N+LI Y K
Sbjct: 131 MREAFLDMDGFTLSGIITACGI--NVGLIRQLH--ALSVVTGLDSYVSVGNALITSYSKN 186
Query: 273 GRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
G + A ++F W + + SW SM+V Y + ++AL+ + M G+ + T V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 332 LSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC-MVDLLGR-AGLLEEARAMVEGMP 388
L+A + + G F +++K+ Y + +H G ++DL + G + + R + + +
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYH---QNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS 303
Query: 389 MKANVVIWGCLMGA 402
++V+W ++
Sbjct: 304 -NPDLVLWNTMISG 316
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 212/363 (58%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
KKAL+++ + ++G D TL KA L L+ G+Q+H+ A++ G +S+ SG
Sbjct: 12 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 71
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y K GD A VF+ +W ++I+G +G +A+ ++ +++ PD+
Sbjct: 72 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 131
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T ++ A + LE Q+H V +K SD + SL+DMY KCG ++ AY++F
Sbjct: 132 YTFATLIKASSCVTALEQGRQLHANV--IKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLF 189
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+++ N++ W +M+VG A +G A EA++ F M+ GI P+ V+F+G+LSAC H G
Sbjct: 190 KKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTS 249
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
E + M N Y IEP HY C+VD LGRAGL++EA ++E MP KA+ I L+GA
Sbjct: 250 EAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGA 309
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C G+V+ G+ VA L LEP+ AYV+LSNIYA+ W++V R +MK +N+ K P
Sbjct: 310 CRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDP 369
Query: 463 AYS 465
+S
Sbjct: 370 GFS 372
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/513 (30%), Positives = 250/513 (48%), Gaps = 78/513 (15%)
Query: 21 LLHRLCKTHTFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHM 79
L+H TH R+ H + + F +++V +S C++L ++ + R +
Sbjct: 48 LIHASNSTHKLRQIHGQLYRCNVF-----SSSRVVTQFISSCSSLNSVDYAISIFQRFEL 102
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+SY +N +IR + ++ ++ M + + PD T P VLK++ L +
Sbjct: 103 KNSYL----FNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGV 158
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE--------------- 184
GR LH ++ GLE + F + +Y K + A KVFDE+PE
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218
Query: 185 --------------------RKLGSWNAII------------------------------ 194
+ GSWN++I
Sbjct: 219 GYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELFVKMPEKNVVSWTTM 278
Query: 195 -AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
G SQ+G ++A++ F + + G P+D T+VS SAC +G L+ L++H Y+ +
Sbjct: 279 VNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYL--SGN 336
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
K + ++ +L+DMY KCG ++ A KVF E + + W+ MI G+A +G +AL F
Sbjct: 337 GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYF 396
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
+M+ +G +P+ V F+ VL+AC H G+V EG FF+ M+ Y IEP HY +VD+LGR
Sbjct: 397 EWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGR 456
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVL 433
AG L+EA + MP+ + V+WG L AC NV+M E +K L +LEP G+YV L
Sbjct: 457 AGRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFL 516
Query: 434 SNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
SN YAS G W++ ER+R M+ K P +S
Sbjct: 517 SNAYASVGRWDDAERVRVSMRDHGAHKDPGWSF 549
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 222/379 (58%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + + P A ++ M G PD TL + Q + R +H +
Sbjct: 385 WNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIM 444
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G L + + + +Y+K G + A KVF+ + + SWN +I G +Q+G A EAI
Sbjct: 445 RRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAI 504
Query: 208 DMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++ +++C P+ T VS+ A +G L+ +++H V +K+ D + LI
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV--IKTNLHLDVFVATCLI 562
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGKCGR+ A +F+++ Q + +W ++I + +G A + L F M + G++P+HV
Sbjct: 563 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHV 622
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V+EGK F +M+ Y I+P HYGCMVDLLGRAG LE A ++
Sbjct: 623 TFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKD 681
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG L+GAC GN+++G++ + L E++ + G YV+LSNIYA+ G WE V
Sbjct: 682 MPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGV 741
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+++R++ + R L K P +S
Sbjct: 742 DKVRSLARERGLKKTPGWS 760
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 189/377 (50%), Gaps = 13/377 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALD-IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN++I Y +A+ Y + + + PD YT P VLKA L GR++H
Sbjct: 183 YTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHC 239
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A +LG + N F + I +YS+ G AR +FD+ P R +GSWNA+I+GL Q+G A +
Sbjct: 240 WAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQ 299
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+D+ ++ G + + VT+VS+ C LGD+ A+ +H YV +K + D + N+L
Sbjct: 300 ALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV--IKHGLEFDLFVSNAL 357
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I+MY K G ++ A K F ++ +V SW S+I Y N A F M+ +G +P+
Sbjct: 358 INMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDL 417
Query: 326 VTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T V + S + + H F M + + + +VD+ + GLL+ A +
Sbjct: 418 LTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGN--AVVDMYAKLGLLDSAHKV 475
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPW--SDGAYVVLSNIYASRG 441
E + +K +V+ W L+ + G V K ++E + + G +V + YA G
Sbjct: 476 FEIILVK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 534
Query: 442 LWEEVERIRAVMKHRNL 458
++ RI + NL
Sbjct: 535 ALQQGMRIHGRVIKTNL 551
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 18/289 (6%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
LH+L V G + F + ++LY+ GD +R FD+ P++ + +WN++I+ +G
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHNGH 197
Query: 203 AKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EAI F L PD T V ACG+L D ++H + F++ + + +
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQW--NVFV 252
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
SLI MY + G +A +F ++ ++ SW +MI G NG A +ALD MR GI
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI----EPRFAHYGCMVDLLGRAGLL 377
+ N VT V +L C G + M+ ++Y I E ++++ + G L
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTA-----MLIHLYVIKHGLEFDLFVSNALINMYAKFGNL 367
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGN--VKMGEWVAKHLQELEP 424
E+AR + M +VV W ++ A E+ + G +V L +P
Sbjct: 368 EDARKAFQQM-FITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 213/403 (52%), Gaps = 33/403 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + +A ++ M G+L D +TL +L A LE+GR +H +
Sbjct: 183 WNTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHML 242
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
G + + + +Y K GD A + FD
Sbjct: 243 VSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRD 302
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ PER + SWNA+I+ Q GR E +D++ ++ G PD+ T+ V SACG GD
Sbjct: 303 WFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGD 362
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L +H YV + +LNSL+DMY +CG++D A +F E+ NV SW +I
Sbjct: 363 LASGKMIHCYVRD--NFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVII 420
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +G A E + F M P+ +TFVG+LSAC HGG ++ G+++FE M VY +
Sbjct: 421 GALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNV 480
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HYGCMVDLLGR G L +A +++ M +K +VV+WG L+GAC GNV++G+ V K
Sbjct: 481 EPEVEHYGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIK 540
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
L ELE + G +V++ N++ WE+++++R +MK + K
Sbjct: 541 QLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKK 583
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 204/431 (47%), Gaps = 74/431 (17%)
Query: 50 PAKIVATQ-----LSKCTNLLQLNQIYAHII----------RTHMLHSYSA--------- 85
PA +VA++ L +C ++ L+QI+AH++ + ++ SY
Sbjct: 4 PAAVVASRHVLELLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGG 63
Query: 86 ---------------AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
F +N ++R Y+ + P++AL ++ + + G+LP+ +TLP VLKA
Sbjct: 64 LCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKA 123
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+ A+E H + V+LG F + + ++ AG +R+ F E +R + SW
Sbjct: 124 CTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSW 183
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
N +I G +Q G EA +F ++ G D T+VS+ AC S G+LE+ VH ++
Sbjct: 184 NTMIGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHM-- 241
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W----------------- 283
+ S + D ++ N+L+DMYGKCG + +A++ F W
Sbjct: 242 LVSGSRVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVR 301
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
++ + N+ SW +MI Y G +E LD ++ MR GI P+ T GVLSAC G
Sbjct: 302 DWFEQMPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNG 361
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ GK +++ + +P ++D+ R G ++ A + MP K NV+ W +
Sbjct: 362 DLASGKMIHCYVRDNFN-DPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK-NVISWNVI 419
Query: 400 MGACEKFGNVK 410
+GA G +
Sbjct: 420 IGALAMHGRAQ 430
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 218/391 (55%), Gaps = 14/391 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL+++ M +G LP+C T+ VL A L A G ++H+ ++
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435
Query: 149 RLGLES--NEF--------CESGFISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAG 196
+ L + N+F + I +YSK F+ AR +FD+ P ER + +W +I G
Sbjct: 436 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 495
Query: 197 LSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
+Q G + +A+ +F+ + + G P+ T+ + AC L + + Q+H YV +
Sbjct: 496 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY 555
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ S + N LIDMY KCG +D A VF + Q + SWTSM+ GY +G +EALD F
Sbjct: 556 ESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 615
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
MR++G P+ +TF+ VL AC H G V +G +F+ M Y + PR HY C +DLL R+
Sbjct: 616 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARS 675
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G L++A V+ MPM+ V+W L+ AC NV++ E L E+ +DG+Y ++S
Sbjct: 676 GRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 735
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NIYA+ G W++V RIR +MK + K P S
Sbjct: 736 NIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 56/379 (14%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S A WN +IR + + A+++ M RAG PD +TLP VLKA +L + G
Sbjct: 125 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 184
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG---SWNAIIAGLSQD 200
H L G ESN F + +++YS+ G E+A +FDE +R + SWN+I++ +
Sbjct: 185 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 244
Query: 201 GRAKEAIDMFIGL------KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
A A+D+F + K D +++V++ ACGSL + +VH +++
Sbjct: 245 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNA--IRNG 302
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W--------------------- 283
D + N+LID Y KCG M+ A KVF W
Sbjct: 303 TFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFK 362
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
E +V +WT++I GY+ G ++EAL+ F M SG PN VT + VLSAC G
Sbjct: 363 NMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLG 422
Query: 340 KVQEGK--HFFEMMKNVYQIEPRFAH-------YGCMVDLLGRAGLLEEARAMVEGMPMK 390
+G H + + + ++ F Y ++D+ + + AR++ + +P++
Sbjct: 423 AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 482
Query: 391 A-NVVIWGCLMGACEKFGN 408
NVV W ++G ++G+
Sbjct: 483 ERNVVTWTVMIGGHAQYGD 501
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 177/397 (44%), Gaps = 61/397 (15%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS----- 113
S+C +L + + I+ I + + WN+I+ + + ALD++ M+
Sbjct: 208 SRCGSLEEASMIFDEITQRGI----DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE 263
Query: 114 -RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
D ++ +L A L A+ +++H A+R G + F + I Y+K G
Sbjct: 264 KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLM 323
Query: 173 EKARKVFD-----------------------------------ENPERKLGSWNAIIAGL 197
E A KVF+ EN + +W A+IAG
Sbjct: 324 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 383
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK----- 252
SQ G + EA+++F + G P+ VT++SV SAC SLG ++H Y +
Sbjct: 384 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 443
Query: 253 ---SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLAN 307
+ D ++ N+LIDMY KC A +F +I ++ NV +WT MI G+A G +N
Sbjct: 444 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 503
Query: 308 EALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAH 363
+AL F M G+ PN T +L AC H ++ GK H + + + Y+ F
Sbjct: 504 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFV- 562
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
C++D+ + G ++ AR + + M K+ + W +M
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKS-AISWTSMM 598
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 127/307 (41%), Gaps = 36/307 (11%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+G ++ Y G + A V + WN +I + GR AI++ + + G
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T+ V ACG L H + + +S+ + N+L+ MY +CG ++ A
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLI--CCNGFESNVFICNALVAMYSRCGSLEEAS 217
Query: 280 KVFWEIDQ---PNVSSWTSMIVGYAANGLANEALDCFHYM------RESGIRPNHVTFVG 330
+F EI Q +V SW S++ + + A ALD F M + + R + ++ V
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277
Query: 331 VLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+L AC VHG ++ G + N ++D + GL+E
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA------------LIDAYAKCGLMEN 325
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL-QELEPWSDGAYVVLSNIYA 438
A + M K +VV W ++ + GN + + K++ +E P + + Y+
Sbjct: 326 AVKVFNMMEFK-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYS 384
Query: 439 SRGLWEE 445
RG E
Sbjct: 385 QRGCSHE 391
>gi|226530803|ref|NP_001148047.1| LOC100281656 [Zea mays]
gi|195615502|gb|ACG29581.1| selenium-binding protein-like [Zea mays]
Length = 597
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 215/394 (54%), Gaps = 14/394 (3%)
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC 132
H+ H L S F N+I+R L P AL + G + +TL I+LK C
Sbjct: 82 HLTTPHYLPS---TFQCNSILRA---LSDPSDALRFLCRVRALGRRGNAFTLAILLKPRC 135
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
+L RQLH+ V G + + + Y+ GD + ARK+FDE P R +WN
Sbjct: 136 ---SLAHARQLHANVVAEGHLRDALLATSLMRCYANRGDGDGARKLFDEMPVRDAVAWNV 192
Query: 193 IIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+I +++ R K+A+ +F + K EPDDVT + + AC SLG L+ QV + +
Sbjct: 193 LITCYARNRRTKDALKLFEEMRGKDSESEPDDVTCILLLQACSSLGALDFGEQV--WAYA 250
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ + + NSLI MY +CG +D AY+VF Q +V +WT+MI G AANG N+A+
Sbjct: 251 EEHGYGGELKVRNSLITMYLRCGCVDKAYRVFSGTPQKSVVTWTAMISGLAANGFGNDAI 310
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F M S + P+ TF GVLSAC H G V EG FF+MM+ Y ++P HYGC+VDL
Sbjct: 311 SVFEEMIRSDVAPDEQTFTGVLSACSHSGLVDEGFRFFDMMRCEYGLKPNVRHYGCIVDL 370
Query: 371 LGRAGLLEEARAMVEG-MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+GRAGLL+EA V M + + IW L+GAC G+V +GE V +L EL+ G
Sbjct: 371 MGRAGLLDEAYEFVTNEMKVAPDATIWRTLLGACRIHGHVDLGERVIGNLIELKAQQAGD 430
Query: 430 YVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
YV+L N YA+ G W +V IR +M+ + P
Sbjct: 431 YVLLLNTYAAVGEWSKVSEIRKLMQEEGIQTTPG 464
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 211/377 (55%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + P AL + M R G P+ +TL V+KA+ G QLH V
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +SN S + LY++ G + A+ VFD R SWNA+IAG ++ ++A++
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + GF P + S+ AC S G LE VH Y+ +KS +K N+L+DM
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM--IKSGEKLVAFAGNTLLDM 306
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F + + +V SW S++ YA +G EA+ F MR GIRPN ++F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG H++E+MK I P HY +VDLLGRAG L A +E MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IW L+ AC N ++G + A+H+ EL+P G +V+L NIYAS G W + R
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + K PA S
Sbjct: 486 VRKKMKESGVKKEPACS 502
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 5/289 (1%)
Query: 127 VLKASCQLFALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
L C +F L I GR +H+ ++ + + +++Y+K G E+ARKVF++ P+R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+W +I+G SQ R +A+ F + + G+ P++ T+ SV A + Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
F VK S+ + ++L+D+Y + G MD A VF ++ N SW ++I G+A
Sbjct: 185 G--FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+AL+ F M G RP+H ++ + AC G +++GK M + FA
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-N 301
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
++D+ ++G + +AR + + + K +VV W L+ A + G K W
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAVW 349
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH ++ Q S + D +M N+L++MY KCG ++ A KVF ++ Q + +WT++I GY+ +
Sbjct: 82 VHAHILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMK 352
+AL F+ M G PN T V+ A +HG V+ G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-----FDS 194
Query: 353 NVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM-GACEKFGNVK 410
NV H G ++DL R GL+++A+ + + + + N V W L+ G + G K
Sbjct: 195 NV--------HVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNALIAGHARRSGTEK 245
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRL 470
E L++ S +Y L +S G E+ + + A M ++ K+ A++ T L
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI-KSGEKLVAFAGNTLL 304
Query: 471 D 471
D
Sbjct: 305 D 305
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 221/414 (53%), Gaps = 33/414 (7%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPI 126
NQ AH LH++ N ++ Y + K L + I + + D ++L
Sbjct: 22 NQPKAH------LHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMF 75
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
LKA +L G+Q+H+L + G E F ++ IS+YS G+ A +FDE P +
Sbjct: 76 ALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN 135
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
L SW ++I+ + R +A+ +F ++ +PD VT+ SAC LG L++ +H
Sbjct: 136 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHA 195
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
Y+ +D + NSLI+MY KCG + A ++F + +V++WTSMIVG+A +G A
Sbjct: 196 YIRH--RGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQA 253
Query: 307 NEALDCFHYMRESGIR----------------PNHVTFVGVLSACVHGGKVQEGKHFFEM 350
EAL F M+E+ R PN VTF+GVL AC H G V+EGK F
Sbjct: 254 EEALQLFTEMKETNKRARKNKRNGEHESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRS 313
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG--- 407
MK Y + PR +H+GCMVDLL RAGLL EA + MP++ N V+W L+GAC G
Sbjct: 314 MKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSN 373
Query: 408 -----NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
N+K+ + L ELEP G V++SN+YA++G+W++ +R +K R
Sbjct: 374 GNGNSNIKIYSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQR 427
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 244/465 (52%), Gaps = 70/465 (15%)
Query: 34 HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNII 93
H +S + D + A I SKC ++ ++++ +I +++ WN++I
Sbjct: 170 HALVSKSRYSTDVYMGSALI--DMYSKCGSVACAEEVFSGMIERNLVT-------WNSLI 220
Query: 94 RLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV----- 148
Y + +AL++++ M +G+ PD TL V+ A L AL+ G Q+H+ V
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280
Query: 149 ----------------------------RLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
R+ + N E+ +S Y++A + AR +F
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR-NVVSETSMVSGYARAASVKAARFMFS 339
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ +R + SWNA+IAG +Q+G +EA+ +F LK+ P T G+L
Sbjct: 340 KMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT----------FGNL-- 387
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
KSD + NSLIDMY KCG ++ +VF ++ + + SW ++IVGY
Sbjct: 388 --------------LKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGY 433
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
A NG EAL F M G +P+HVT +GVL AC H G V+EG+H+F M+ + + P
Sbjct: 434 AQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPL 492
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
HY CMVDLLGRAG L EA+ ++E MP+ + V+WG L+ AC+ GN++MG+ A+ L
Sbjct: 493 KDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL 552
Query: 421 ELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E++PW+ G YV+LSN+YA G W +V R+R +M+ + + K P S
Sbjct: 553 EIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 597
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 156/306 (50%), Gaps = 6/306 (1%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + IS+ +K+G ++A ++F PE SWN++++G +Q R +E+++ F+
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ + F ++ + S SAC L DL + QVH V KS+ +D M ++LIDMY KC
Sbjct: 138 MHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALV--SKSRYSTDVYMGSALIDMYSKC 195
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A +VF + + N+ +W S+I Y NG A+EAL+ F M +SG+ P+ VT V+
Sbjct: 196 GSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVV 255
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC ++EG + + +VD+ + + EAR + + M ++ N
Sbjct: 256 SACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR-N 314
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
VV ++ + +VK ++ + + S A + Y G EE R+ +
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIA---GYTQNGENEEALRLFRL 371
Query: 453 MKHRNL 458
+K ++
Sbjct: 372 LKRESI 377
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 218/391 (55%), Gaps = 14/391 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL+++ M +G LP+C T+ VL A L A G ++H+ ++
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428
Query: 149 RLGLES--NEF--------CESGFISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAG 196
+ L + N+F + I +YSK F+ AR +FD+ P ER + +W +I G
Sbjct: 429 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGG 488
Query: 197 LSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
+Q G + +A+ +F+ + + G P+ T+ + AC L + + Q+H YV +
Sbjct: 489 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY 548
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ S + N LIDMY KCG +D A VF + Q + SWTSM+ GY +G +EALD F
Sbjct: 549 ESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 608
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
MR++G P+ +TF+ VL AC H G V +G +F+ M Y + PR HY C +DLL R+
Sbjct: 609 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARS 668
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G L++A V+ MPM+ V+W L+ AC NV++ E L E+ +DG+Y ++S
Sbjct: 669 GRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 728
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
NIYA+ G W++V RIR +MK + K P S
Sbjct: 729 NIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 179/379 (47%), Gaps = 56/379 (14%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S A WN +IR + + A+++ M RAG PD +TLP VLKA +L + G
Sbjct: 118 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 177
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG---SWNAIIAGLSQD 200
H L G ESN F + +++YS+ G E+A +FDE +R + SWN+I++ +
Sbjct: 178 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 237
Query: 201 GRAKEAIDMFIGL------KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
A A+D+F + K D +++V++ ACGSL + +VH +++
Sbjct: 238 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNA--IRNG 295
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVF----------W--------------------- 283
D + N+LID Y KCG M+ A KVF W
Sbjct: 296 TFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFK 355
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
E +V +WT++I GY+ G ++EAL+ F M SG PN VT + VLSAC G
Sbjct: 356 NMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLG 415
Query: 340 KVQEGK--HFFEMMKNVYQIEPRFAH-------YGCMVDLLGRAGLLEEARAMVEGMPMK 390
+G H + + + ++ F Y ++D+ + + AR++ + +P++
Sbjct: 416 AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 475
Query: 391 A-NVVIWGCLMGACEKFGN 408
NVV W ++G ++G+
Sbjct: 476 ERNVVTWTVMIGGHAQYGD 494
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 177/397 (44%), Gaps = 61/397 (15%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS----- 113
S+C +L + + I+ I + + WN+I+ + + ALD++ M+
Sbjct: 201 SRCGSLEEASMIFDEITQRGI----DDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE 256
Query: 114 -RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
D ++ +L A L A+ +++H A+R G + F + I Y+K G
Sbjct: 257 KPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLM 316
Query: 173 EKARKVFD-----------------------------------ENPERKLGSWNAIIAGL 197
E A KVF+ EN + +W A+IAG
Sbjct: 317 ENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGY 376
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK----- 252
SQ G + EA+++F + G P+ VT++SV SAC SLG ++H Y +
Sbjct: 377 SQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLD 436
Query: 253 ---SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLAN 307
+ D ++ N+LIDMY KC A +F +I ++ NV +WT MI G+A G +N
Sbjct: 437 NDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN 496
Query: 308 EALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAH 363
+AL F M G+ PN T +L AC H ++ GK H + + + Y+ F
Sbjct: 497 DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVA 556
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
C++D+ + G ++ AR + + M K+ + W +M
Sbjct: 557 -NCLIDMYSKCGDVDTARHVFDSMSQKS-AISWTSMM 591
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 127/307 (41%), Gaps = 36/307 (11%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+G ++ Y G + A V + WN +I + GR AI++ + + G
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T+ V ACG L H + + +S+ + N+L+ MY +CG ++ A
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLI--CCNGFESNVFICNALVAMYSRCGSLEEAS 210
Query: 280 KVFWEIDQ---PNVSSWTSMIVGYAANGLANEALDCFHYM------RESGIRPNHVTFVG 330
+F EI Q +V SW S++ + + A ALD F M + + R + ++ V
Sbjct: 211 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 270
Query: 331 VLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+L AC VHG ++ G + N ++D + GL+E
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNA------------LIDAYAKCGLMEN 318
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL-QELEPWSDGAYVVLSNIYA 438
A + M K +VV W ++ + GN + + K++ +E P + + Y+
Sbjct: 319 AVKVFNMMEFK-DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYS 377
Query: 439 SRGLWEE 445
RG E
Sbjct: 378 QRGCSHE 384
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/407 (34%), Positives = 216/407 (53%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC +L IR W ++I Y R A+ ++ M GV+
Sbjct: 399 SKCGDL-------NSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVV 451
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD Y + +L A L+ G+ +H LE+N F + +Y+K G + A V
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F ++ + SWN +I G +++ EA+ +F +++ +PD T+ + AC SL L
Sbjct: 512 FSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAAL 570
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ ++H Y +++ D + N+++DMY KCG + LA +F I ++ SWT MI
Sbjct: 571 DKGREIHGYA--LRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIA 628
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G +EA++ F+ MR +GI P+ V+F+ +L AC H G + EG F +MK QIE
Sbjct: 629 GYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIE 688
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HY CMVDLL R G L +A ++ MP+K + IWG L+ C +VK+ E VA+
Sbjct: 689 PNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAER 748
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + G YV+L+NIYA WEEV+++R + R L K P S
Sbjct: 749 IFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCS 795
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 175/346 (50%), Gaps = 10/346 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC +L + ++ + S S F WN +I Y+ ++++++ M G+ P
Sbjct: 197 KCGDLKEGRMVFDKL-------SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKP 249
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
+ YT +LK + +E GRQ+H L +LG S + IS Y A+K+F
Sbjct: 250 NSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLF 309
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
DE +R + SWN++I+G ++G I++FI + G + D TMV+V AC ++G L
Sbjct: 310 DELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLL 369
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
L +H Y + + + + N+L+DMY KCG ++ A +VF +D+ V SWTSMI G
Sbjct: 370 LGKVLHSYSIKAATLDR-EVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITG 428
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y GL++ A+ F M+ G+ P+ +L+AC G ++ GK + ++ +E
Sbjct: 429 YVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRE-NNLET 487
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ D+ + G +++A + M K +V+ W ++G K
Sbjct: 488 NSFVSNALTDMYAKCGSMKDAHDVFSHMK-KKDVISWNTMIGGYTK 532
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 153/329 (46%), Gaps = 25/329 (7%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L+ + ++ GR++ S+ G+ + + +Y K GD ++ R VFD+ E K
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +I+ S G E+I++F + + G +P+ T S+ ++ +E QVH
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ K S ++NSLI Y ++ A K+F E+ +V SW SMI GY NGL
Sbjct: 276 LI--CKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLD 333
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHY 364
+ ++ F M G+ + T V V AC + G + GK H + + E RF +
Sbjct: 334 DRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN- 392
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
++D+ + G L A + E M K VV W ++ G V+ G
Sbjct: 393 -TLLDMYSKCGDLNSAIRVFERMDEKT-VVSWTSMIT-----GYVREG------------ 433
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVM 453
SDGA + L + SRG+ +V + +++
Sbjct: 434 LSDGA-IKLFDEMKSRGVVPDVYAVTSIL 461
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 217/383 (56%), Gaps = 11/383 (2%)
Query: 89 WNNIIRLYTRLEA----PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+N ++R Y R ++A +++ M GV PD YT +LKA A E GRQ H
Sbjct: 102 YNTLLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAH 161
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+AV+ G +E+ I++Y++ GD AR +FD + S+NA+I +
Sbjct: 162 GVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPG 221
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-- 262
EA+ +F ++ G +P VT++SV SAC LG LEL +H Y+ K + D+L+
Sbjct: 222 EALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYI----RKMRLDSLVKVN 277
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+LIDMY KCG ++ A VF +++ + +W+ M+V YA +G EA+ F M++ G++
Sbjct: 278 TALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMK 337
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ VTF+GVL AC H G V EG +F+ M+ Y I HYGC+ DLL R+G LE A
Sbjct: 338 PDDVTFLGVLYACSHSGMVSEGLQYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLERAYK 396
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ +P+K ++W L+ AC G+V MG+ V + + EL+ G YV+ SN+ A+ G
Sbjct: 397 FIDELPIKPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGR 456
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WEE+ +R +M + + K+P S
Sbjct: 457 WEEMNMVRKLMSEKGVVKVPGCS 479
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 213/383 (55%), Gaps = 2/383 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + E + ++++ M V PD TL ++L +L LE+G+Q+HS +V
Sbjct: 386 WNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASV 445
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+L L ++ F SG I +YSK G A+ +F+ ER + WN++I+GL+ +EA D
Sbjct: 446 KLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFD 505
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ G P + + S+ ++C L + Q+H V +K + + +SLIDM
Sbjct: 506 FFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQV--LKDGYDQNVYVGSSLIDM 563
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A F + N+ +W MI GYA NG +A++ F YM + +P+ VTF
Sbjct: 564 YAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTF 623
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+ C H G V E +F M++ Y I P HY C++D LGRAG E A+++ MP
Sbjct: 624 IAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMP 683
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K + ++W L+ AC N ++GE+ AKHL L+P + YV+LSNIYA+ G +
Sbjct: 684 YKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASA 743
Query: 449 IRAVMKHRNLAKIPAYSLATRLD 471
+RA+M R + K YS D
Sbjct: 744 VRALMSSRGVVKGRGYSWVNHKD 766
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 18/341 (5%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I R ++P +AL++Y M + G+ P +TL VL A + AL+ GR+ H
Sbjct: 107 AVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHG 166
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LAV++GL+ N+F E+G + +Y+K G A ++FD S+ A++ GL+Q G +
Sbjct: 167 LAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDD 226
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGS--LGD------LELALQVHKYVFQVKSKQKS 257
A+ +F + + D V + SV AC GD + LA +H V V+ S
Sbjct: 227 ALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALV--VRKGFDS 284
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D + NSLIDMY K +MD A KVF + ++ SW ++ GY G AL+ M+
Sbjct: 285 DQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQ 344
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
ESG PN VT+ +L++C+ V + F+ + +P + ++ G+ L
Sbjct: 345 ESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIS-----KPSVTTWNTLLSGYGQEELH 399
Query: 378 EEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWV 415
++ + M ++ + ++ C + G +++G+ V
Sbjct: 400 QDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQV 440
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 10/308 (3%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N++I +Y + +A+ ++ MS ++ + I++ QL E ++ L
Sbjct: 290 NSLIDMYAKGMKMDEAMKVFESMSSVSIV----SWNILVTGYGQLGCYERALEVLDLMQE 345
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
G E NE S ++ KA D AR +FD+ + + +WN +++G Q+ ++ I++
Sbjct: 346 SGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIEL 405
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F ++ +PD T+ + S C LG LEL QVH VK +D + + LIDMY
Sbjct: 406 FRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSA--SVKLLLHNDMFVASGLIDMY 463
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG++ +A +F + + +V W SMI G A + L EA D F MRE+G+ P ++
Sbjct: 464 SKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYA 523
Query: 330 GVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
++++C + +G+ +++K+ Y ++D+ + G +++AR M
Sbjct: 524 SMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVG--SSLIDMYAKCGNMDDARLFFNCMI 581
Query: 389 MKANVVIW 396
+K N+V W
Sbjct: 582 VK-NIVAW 588
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 163/349 (46%), Gaps = 24/349 (6%)
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL-AVRLGLESNEFCESGFISLYSKAGDFE 173
AG+ D + L ++ +L++L G H+L A R N + + IS +AGD
Sbjct: 39 AGLAADTFLLNRLV----ELYSLS-GLPCHALRAFRALPRPNVYSYNAAISAACRAGDLA 93
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR + P+R SWN +IA +++ EA++M+ G+ + G P + T+ SV SACG
Sbjct: 94 AARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACG 153
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
++ L+ + H VK + + N L+ MY KCG + A ++F + PN S+
Sbjct: 154 AVAALDDGRRCHG--LAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSF 211
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH--GGKVQEGKHFFEMM 351
T+M+ G A +G ++AL F M S IR + V VL AC G + +
Sbjct: 212 TAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARA-IRLA 270
Query: 352 KNVYQIEPRFA-----HYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
++++ + R H G ++D+ + ++EA + E M ++V W L+ +
Sbjct: 271 QSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMS-SVSIVSWNILVTGYGQ 329
Query: 406 FGNVKMGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
G + V +QE EP V SN+ AS +V RA+
Sbjct: 330 LGCYERALEVLDLMQESGFEPNE----VTYSNMLASCIKARDVPSARAM 374
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 227/411 (55%), Gaps = 33/411 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I Y R++ ++++++ + M R V P TL +VL A ++ ++ +++H
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE---------KARKV------------------- 178
E + E+ ++ Y+ G+ + KAR V
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 179 ---FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
FD+ P R SW +I G + G E++++F ++ G PD+ TMVSV +AC L
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + Y+ K+K K+D ++ N+LIDMY KCG + A KVF ++DQ + +WT+
Sbjct: 382 GSLEIGEWIKTYI--DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+VG A NG EA+ F M++ I+P+ +T++GVLSAC H G V + + FF M++ +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+IEP HYGCMVD+LGRAGL++EA ++ MPM N ++WG L+GA + M E
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELA 559
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
AK + ELEP + Y +L NIYA W+++ +R + + K P +SL
Sbjct: 560 AKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 171/334 (51%), Gaps = 35/334 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIGRQLHSLA 147
WNN+I+ +++++ + + +Y+ M + GV PD +T P +L AL G++LH
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL SN + ++ + +YS G + AR VFD + + SWN +I+G ++ +E+I
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + +++ P VT++ V SAC + D +L +VH+YV + K+ + + N+L++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT--EPSLRLENALVN 279
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTS-------------------------------M 296
Y CG MD+A ++F + +V SWTS M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY G NE+L+ F M+ +G+ P+ T V VL+AC H G ++ G+ + + + +
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNK 398
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
I+ ++D+ + G E+A+ + M +
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 141 RQLHSLAVRLGLESN-EFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+QLHS ++ G+ N F + F+ S+ G A K+F + PE + WN +I G S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKS 257
+ E + +++ + K G PD T + + G L ++H +V VK S
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV--VKFGLGS 168
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + N+L+ MY CG MD+A VF + +V SW MI GY E+++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+ + P VT + VLSAC K E + + EP +V+ G +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC-KTEPSLRLENALVNAYAACGEM 287
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ A + M + +V+ W ++ + GN+K+
Sbjct: 288 DIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA 321
>gi|296082950|emb|CBI22251.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 224/402 (55%), Gaps = 37/402 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ----LFALEIGRQ 142
F +N +IR Y++ +P +++ ++ M R V PD +T +LK + L + +
Sbjct: 61 FFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDE 120
Query: 143 LHSLAVRLGLESNEFCESGFISLYS-------------------------------KAGD 171
+H ++LG + F + I LY+ +AG+
Sbjct: 121 IHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGE 180
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
E AR+VF E PER + SW +++G +Q R++EA+++F ++ G PD+V MVSV SA
Sbjct: 181 LELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISA 240
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C SLGDLE +VH+Y+ + + N+LIDMY KCG MDLA++VF +++ ++
Sbjct: 241 CTSLGDLETGFEVHRYIDENGFGWMVS--LCNALIDMYAKCGCMDLAWQVFNNMERKSLI 298
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+W SMI A +G A +A F M SGIRP+ VTF+ +L+A H G V +G FE M
Sbjct: 299 TWNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESM 358
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ Y +E HYGCMVD+LGRAG LEEA ++ M M N V+WG L+ AC +G+V+M
Sbjct: 359 QRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEM 418
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
GE V K L EL+P G Y++L +IY + G E +R M
Sbjct: 419 GERVLKKLIELKPDEGGYYILLRDIYVAAGRRAEAIELRRAM 460
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 49/309 (15%)
Query: 143 LHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H+LA R L + + S G A ++F + + +N +I G S+
Sbjct: 14 IHALAFRANLHHHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKS 73
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG-DLELAL---QVHKYVFQVKSKQK 256
+++ +F +++ +PD T + + DL L + ++H V +K
Sbjct: 74 SSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAV--LKLGFC 131
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV------------------ 298
++N+LI +Y G A++VF E+ +V SW+ ++V
Sbjct: 132 FHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEM 191
Query: 299 -------------GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
GYA + EAL+ F MR+ G+RP+ V V V+SAC G ++ G
Sbjct: 192 PERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETG- 250
Query: 346 HFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
FE+ + Y E F ++D+ + G ++ A + M K+ ++ W ++
Sbjct: 251 --FEVHR--YIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSMIS 305
Query: 402 ACEKFGNVK 410
AC GN +
Sbjct: 306 ACANHGNAE 314
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 209/383 (54%), Gaps = 7/383 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSR----AGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F W+ I+ + R P+ AL IY M R AGV + +T L A+ GR+
Sbjct: 125 FSWSAIVSAHARHGQPRAALAIYRRMLREPGSAGV-DNEFTASSALAAATAARCARAGRE 183
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
LH VR G++++ S +Y+K G + AR VFD P R + SW A++ R
Sbjct: 184 LHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARR 243
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
E +F+ + + G +P++ T V AC +L QVH + KS+
Sbjct: 244 DGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRM--TKSRAGDSCFAE 301
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
++L+ MY K G M A +VF + + ++ SWT+MI GYA NG +EAL F + SG R
Sbjct: 302 SALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCR 361
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+HVTFVGVLSAC H G V +G F +K+ Y IE HY C++DLL R+GL E A
Sbjct: 362 PDHVTFVGVLSACAHAGLVDKGLSIFHSIKDEYGIEHTADHYACVIDLLSRSGLFERAEE 421
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
M+ M +K N +W L+G C NV++ W A+ L E+EP + YV L+NIYAS GL
Sbjct: 422 MINTMSVKPNKFLWASLLGGCRIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGL 481
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
++EVE R +M+ + + K+PA S
Sbjct: 482 FDEVENTRRIMELKGITKMPASS 504
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 15/272 (5%)
Query: 145 SLAVRLGLESNEFCESGFI--SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+LA+ L S + C + +L AR +FD P R SW+AI++ ++ G+
Sbjct: 80 ALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMPRRDHFSWSAIVSAHARHGQ 139
Query: 203 AKEAIDMFIGLKKCGFEP------DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+ A+ ++ ++ EP ++ T S +A + ++H +V V+
Sbjct: 140 PRAALAIY---RRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHV--VRRGID 194
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
+D ++ ++L DMY KCGR+D A VF + +V SWT+M+ Y E F M
Sbjct: 195 ADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRM 254
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
SGI+PN T+ GVL AC + GK M + FA +V + + G
Sbjct: 255 LRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAE-SALVHMYSKYGD 313
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ A + GMP K ++V W ++ + G
Sbjct: 314 MGTAVRVFRGMP-KLDLVSWTAMISGYAQNGQ 344
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 212/363 (58%), Gaps = 2/363 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++AL ++ ++ + P+ T+ VL + AL +G+Q+H +R E + ES
Sbjct: 426 EEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESAL 485
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y+K G + + +F + ++ +WN++I+ SQ+G+ +EA+D+F + G + ++
Sbjct: 486 MDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNN 545
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+T+ + SAC SL + ++H +K K+D ++LIDMY KCG ++LA +VF
Sbjct: 546 ITISAALSACASLPAIYYGKEIHG--VTIKGPIKADIFAESALIDMYAKCGNLELALRVF 603
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ N SW S+I Y A+GL E++ H M+E G +P+HVTF+ ++SAC H G V+
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVE 663
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG F+ M Y I PR H+ CMVDL R+G L++A + MP K + IWG L+ A
Sbjct: 664 EGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHA 723
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C NV++ + ++ L +L+P + G YV++SNI A G W+ V ++R +MK + KIP
Sbjct: 724 CRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIP 783
Query: 463 AYS 465
YS
Sbjct: 784 GYS 786
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 180/371 (48%), Gaps = 5/371 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +A ++ M R+G PD TL +L A L L+ G+++H V
Sbjct: 311 WNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIV 370
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + + F S + +Y K D A+ ++D + + +I+G +G ++EA+
Sbjct: 371 RNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQ 430
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L + +P+ VT+ SV C S+ L L Q+H YV + ++K + ++L+DM
Sbjct: 431 MFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERK--CYVESALMDM 488
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCGR+DL++ +F ++ Q + +W SMI ++ NG EALD F M GI+ N++T
Sbjct: 489 YAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
LSAC + GK + FA ++D+ + G LE A + E MP
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIKGPIKADIFAE-SALIDMYAKCGNLELALRVFEFMP 607
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVE 447
K N V W ++ A G VK + +QE D ++ L + A GL EE
Sbjct: 608 DK-NEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGV 666
Query: 448 RIRAVMKHRNL 458
++ M + L
Sbjct: 667 QLFQCMTKKYL 677
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+++ WN +IR +T A+ Y+ M A PD +TLP V+K+ L A+ +GR
Sbjct: 102 ASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGR 161
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+H A +GL ++ + S + +Y+ AG AR FD PER WN ++ G + G
Sbjct: 162 LVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAG 221
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A+ +F ++ G EP+ T+ S C + DL Q+H VK + + +
Sbjct: 222 DVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHS--LAVKCGLEPEVAV 279
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+L+ MY KC +D A+++F + Q ++ +W MI G NGL EA F+ M+ SG
Sbjct: 280 ANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGA 339
Query: 322 RPNHVTFVGVLSACVHGGKVQEGK 345
RP+ +T V +L A +++GK
Sbjct: 340 RPDSITLVSLLPALTDLNGLKQGK 363
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 159/320 (49%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + A+ ++ M +G P+ TL L L G QLHSLAV
Sbjct: 210 WNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV 269
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLE + +++Y+K + A ++F+ P+ L +WN +I+G Q+G EA
Sbjct: 270 KCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFG 329
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ G PD +T+VS+ A L L+ +VH Y+ V++ D ++++L+D+
Sbjct: 330 LFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYI--VRNCVNMDVFLVSALVDI 387
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + +A ++ +V ++MI GY NG++ EAL F Y+ E I+PN VT
Sbjct: 388 YFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTI 447
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
VL C + G+ +++N Y E + ++D+ + G L+ + + M
Sbjct: 448 ASVLPGCASMAALPLGQQIHGYVLRNAY--ERKCYVESALMDMYAKCGRLDLSHYIFLKM 505
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + V W ++ + + G
Sbjct: 506 SQK-DEVTWNSMISSFSQNG 524
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 130/248 (52%), Gaps = 14/248 (5%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLH------SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
KC L +YA R + H S WN++I +++ P++ALD++ M
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMC 537
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ + T+ L A L A+ G+++H + ++ ++++ F ES I +Y+K G+ E
Sbjct: 538 MEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLE 597
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A +VF+ P++ SWN+II+ G KE++ + G+++ G++PD VT +++ SAC
Sbjct: 598 LALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACA 657
Query: 234 SLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSLIDMYGKCGRMDLAYKVFWEID-QPN 289
G +E +Q +FQ +K+ ++D+Y + G++D A + ++ +P+
Sbjct: 658 HAGLVEEGVQ----LFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPD 713
Query: 290 VSSWTSMI 297
W +++
Sbjct: 714 AGIWGALL 721
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 8/191 (4%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFW 283
+++V C S L L LQ+H + + L L++ L+ MY R A VF
Sbjct: 35 LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 284 EIDQPNVSS---WTSMIVGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHG 338
+ + +S W +I G+ A G + A+ + M + P+ T V+ +C
Sbjct: 95 ALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G + G+ + + + +V + AGLL AR +G+P + + V+W
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVG-SALVKMYADAGLLGNARDAFDGIPER-DCVLWNV 212
Query: 399 LMGACEKFGNV 409
+M C K G+V
Sbjct: 213 MMDGCIKAGDV 223
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 217/377 (57%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + A +A + I M + G P+ TL +L A ++ +L+ G+Q+H+ ++
Sbjct: 347 WNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSI 406
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R GL + F + I +Y+K G A+ +FD + E+ S+N +I G SQ + E+++
Sbjct: 407 RTGLMFDLFISNALIDMYAKCGQLRLAQSIFDLS-EKDDVSYNTLILGYSQSPWSFESLN 465
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L G E D ++ + +AC +L + ++H + V+ + + N+L+ +
Sbjct: 466 LFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVL--VRRLLSNHPFLANTLLGL 523
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +D A K+F I + +V+SW +MI+GY +G + A F M++ G+ +HV++
Sbjct: 524 YTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSY 583
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLS C HGG V+ GK +F M +EP+ HY CMVDLLGR+G L E+ ++ MP
Sbjct: 584 IAVLSVCSHGGLVERGKKYFSHML-AQNLEPQQMHYACMVDLLGRSGQLTESVEIILDMP 642
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN +WG L+GAC GN+++ ++ A HL EL+P G Y VL N+YA G W E +
Sbjct: 643 FHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHK 702
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK R + K PAYS
Sbjct: 703 IRTLMKSRKVQKNPAYS 719
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 194/376 (51%), Gaps = 16/376 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ I + L ++ MS G +P TL +L A +L ++GR++H ++
Sbjct: 246 WNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSI 305
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E + F + + +Y+K G EKA VF++ R + SWNA+IA L Q+G EA
Sbjct: 306 KRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFG 365
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ I ++K G P+ +T+V++ AC + L+ Q+H + +++ D + N+LIDM
Sbjct: 366 LVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAW--SIRTGLMFDLFISNALIDM 423
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ LA +F ++ + + S+ ++I+GY+ + + E+L+ F + GI + ++F
Sbjct: 424 YAKCGQLRLAQSIF-DLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISF 482
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+G L+AC + ++GK +++ + P A+ ++ L + G+L+ A + +
Sbjct: 483 MGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLAN--TLLGLYTKGGMLDTASKIFNRI 540
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE-----PWSDGAYVVLSNIYASRGL 442
K +V W ++ G + A HL +L + +Y+ + ++ + GL
Sbjct: 541 KEK-DVASWNNMIMGYGMHGQID----AAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGL 595
Query: 443 WEEVERIRAVMKHRNL 458
E ++ + M +NL
Sbjct: 596 VERGKKYFSHMLAQNL 611
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 10/320 (3%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI--GRQ 142
+AF WN++ R + P +AL +Y M R+GV PD T P L A+ G +
Sbjct: 38 SAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLE 97
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
LH+ A+R G ++ F + ++ Y+ G AR+VFDE P R + SWN++++ +
Sbjct: 98 LHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKM 157
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+A + + + G + ++VSV ACG + L VH V +K+ S +
Sbjct: 158 FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLV--LKTGLDSIVNLG 215
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+L+DMYGK G ++ + KVF + + N SW S I + GL + L F M E G
Sbjct: 216 NALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFM 275
Query: 323 PNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P +T +L A V G G+ H + +K +++ A+ +VD+ + G LE+A
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYS-IKRAMELDIFVAN--SLVDMYAKFGSLEKA 332
Query: 381 RAMVEGMPMKANVVIWGCLM 400
A+ E + ++ NVV W ++
Sbjct: 333 CAVFEKIEVR-NVVSWNAMI 351
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 135/290 (46%), Gaps = 12/290 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + A + M R+GV + +L V+ A G +H L +
Sbjct: 145 WNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVL 204
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+S + + +Y K G E + KVF+ PER SWN+ I G + +
Sbjct: 205 KTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLA 264
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + GF P +T+ S+ A LG +L +VH Y +K + D + NSL+DM
Sbjct: 265 LFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGY--SIKRAMELDIFVANSLVDM 322
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G ++ A VF +I+ NV SW +MI NG +EA M++ G PN +T
Sbjct: 323 YAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITL 382
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
V +L AC ++ GK QI G M DL L++
Sbjct: 383 VNLLPACSRMASLKTGK----------QIHAWSIRTGLMFDLFISNALID 422
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 12/245 (4%)
Query: 166 YSKAGDFEKARKVFDENPERKLGS--WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
Y+ D +R + +P R + WN++ LS EA+ ++ + + G PDD
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T A + A + + ++S +D N+L+ Y CG A +VF
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
E+ +V SW S++ + AN + ++A M SG+ N + V V+ AC G QE
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPAC---GVEQE 192
Query: 344 GKHFFEMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW----G 397
G + V + ++ +VD+ G+ G +E + + EGMP + N V W G
Sbjct: 193 GGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPER-NEVSWNSAIG 251
Query: 398 CLMGA 402
C + A
Sbjct: 252 CFLNA 256
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 214/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+++ ++AL + M V D + L L A L A + GR +HS V
Sbjct: 175 WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV 234
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
+LG ES+ F + +YSKAGD E A VF + E R + S+ +I G + + ++ +
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ L++ G EP++ T S+ AC + LE Q+H V ++ + D + + L+D
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE--DPFVSSILVD 352
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MYGKCG ++ A + F EI P +W S++ + +GL +A+ F M + G++PN +T
Sbjct: 353 MYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAIT 412
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +L+ C H G V+EG +F M Y + P HY C++DLLGRAG L+EA+ + M
Sbjct: 413 FISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + N W +GAC G+ +MG+ A+ L +LEP + GA V+LSNIYA+ WE+V
Sbjct: 473 PFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVR 532
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R M+ N+ K+P YS
Sbjct: 533 SVRMRMRDGNVKKLPGYS 550
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 172/370 (46%), Gaps = 32/370 (8%)
Query: 14 RMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAH 73
R K H LL +C +T +FL H + SKC L +++
Sbjct: 23 RGKQLHALL--ICAGYT---------PCTFLTNH------LVNMYSKCGELDHALKLFDT 65
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
+ + +++ W +I ++ +A+ + M G +P + ++A
Sbjct: 66 MPQRNLVS-------WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L ++E+G+Q+H LA++ G+ S F S +YSK G A KVF+E P + SW A+
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I G S+ G +EA+ F + D + S ACG+L + VH V VK
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSV--VKL 236
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALD 311
+SD + N+L DMY K G M+ A VF ID NV S+T +I GY + L
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLS 295
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDL 370
F +R GI PN TF ++ AC + +++G ++MK + +P + +VD+
Sbjct: 296 VFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDM 353
Query: 371 LGRAGLLEEA 380
G+ GLLE+A
Sbjct: 354 YGKCGLLEQA 363
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 169/353 (47%), Gaps = 10/353 (2%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+L D L V++ + L G+QLH+L + G F + +++YSK G+ + A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+FD P+R L SW A+I+GLSQ+ + EAI F G++ CG P S AC SLG
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+E+ Q+H +K S+ + ++L DMY KCG M A KVF E+ + SWT+M
Sbjct: 121 SIEMGKQMH--CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY+ G EAL F M + + + L AC G ++ K + +V +
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC---GALKACKFGRSVHSSVVK 235
Query: 357 I--EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ E + D+ +AG +E A + NVV + CL+ + ++ G
Sbjct: 236 LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLS 295
Query: 415 VAKHL--QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V L Q +EP ++ + L A++ E+ ++ A + N + P S
Sbjct: 296 VFVELRRQGIEP-NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 235/469 (50%), Gaps = 63/469 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSA-----------------------------AFH 88
L KC ++L QI+A ++++ +L A F
Sbjct: 18 LQKCPTEVELKQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFDRPDTFL 77
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +IR + + P ++L +Y M + YT P +LKA L A + Q+H+
Sbjct: 78 WNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHIT 137
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII-------------- 194
+ G + + + I+ Y+ G+F+ A +FD E SWN++I
Sbjct: 138 KFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALT 197
Query: 195 ------------------AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
+G Q G KEA+ +F ++ PD+V++ S SAC LG
Sbjct: 198 LFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLG 257
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE +H Y K++ + D+++ LIDMY KCG M+ A VF + +V WT++
Sbjct: 258 ALEQGKWIHSYA--NKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTAL 315
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA +GL EA+ F M+ G++PN +TF VL+AC + G V+EGK F ++ Y
Sbjct: 316 ISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYN 375
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
++P HYGCMVDLLGRAGLL EA ++ MP+K N VIWG L+ AC+ N+++GE +
Sbjct: 376 LKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIG 435
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L E++ G YV ++NI+A W++ R +M+ + + K+P S
Sbjct: 436 EILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGCS 484
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 224/412 (54%), Gaps = 33/412 (8%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F WN +++ + +A +Y M + LP+ +T V++A +F L++G H
Sbjct: 76 STFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFH 135
Query: 145 SLAVRLGLESNEFCESGFISLYSKAG--DFEK---------------------------- 174
V+ G ES +F ++G I LY+ G D +
Sbjct: 136 GQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVL 195
Query: 175 -ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
AR++FD PE+ SW A+IAG + G KEA+++F ++ GF + ++V +AC
Sbjct: 196 IARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACA 255
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L+ +H YV + D ++ +LIDMY KCG +++A VF E+D +V ++
Sbjct: 256 FLGALDQGRWIHAYV--KRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDRDVYAF 313
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T +I G A + + A+D F+ M++ G+ PN VTFV VL+AC G V EG FE M N
Sbjct: 314 TCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSN 373
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
Y IEP+ HYGC+VDLLGRAG +EEA+ +V MP++ + G L+ AC G+V++GE
Sbjct: 374 RYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGE 433
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L + G +V+LSN+YAS WE+ +IR M+ +N+ K+P S
Sbjct: 434 EMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCS 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 2/154 (1%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A ++F + + W +M+ + A A + +M ES PN+ TF V+ AC+
Sbjct: 65 AERLFLCLQNKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACID 124
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
+Q G F + F G ++ L G ++ AR M + M +K +VV W
Sbjct: 125 VFNLQMGLCFHGQVVKFGWESYDFVQNG-LIHLYANCGFMDLARNMFD-MSIKRDVVTWT 182
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV 431
CL+ G V + + + E P S GA +
Sbjct: 183 CLISGYLNSGQVLIARELFDRMPEKNPVSWGALI 216
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 221/403 (54%), Gaps = 33/403 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + ++A ++ M R G+L D +TL +L A LE G+ +HS +
Sbjct: 179 WNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLL 238
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
G + + + +Y K GD + AR
Sbjct: 239 VRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARD 298
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
F++ PE+ + SWNA+I+ Q GR EA+D++ +K G PD+ T+ +V SACG LGD
Sbjct: 299 WFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGD 358
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L +H + + + NSL+DMY +CG++D A +F E+ NV SW ++I
Sbjct: 359 LASGKMIHDCI--RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAII 416
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +G A +AL F M P+ +TFV +LSAC HGG ++ G+++F+ M++VY +
Sbjct: 417 GALAMHGRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNV 476
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HY CMVDLLGR G L +A +++ MPM+ +VV+WG L+GAC G++++G+ V K
Sbjct: 477 KPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIK 536
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
L ELE S G +V++SN+ WE+++R+R +M+ + K
Sbjct: 537 QLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKK 579
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 206/419 (49%), Gaps = 63/419 (15%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHII-------RTHMLHSYSA------------------ 85
A+ V L +C ++ +LNQ++AH++ + +L SY A
Sbjct: 12 ARHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYARQLFDRIP 71
Query: 86 ---AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F +N++IR Y P++AL + M R G+LP+ +TLP +LKA ++ A E
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMV 131
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
H + V+LG F + + Y+ AG +R+ FDE +R + SWN++I G +Q G
Sbjct: 132 THGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGN 191
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+EA +F G+++ G D+ T+VS+ AC + G+LE VH ++ + + D ++
Sbjct: 192 TREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHL--LVRGCRIDLILA 249
Query: 263 NSLIDMYGKCGRMDLAYKVF-----------------------------W--EIDQPNVS 291
N+L+DMYGKCG + +A+ F W +I + ++
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW +MI Y G +EALD ++ M+ G+ P+ T VLSAC G + GK + +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++ + P A + ++D+ R G ++ A ++ MP K NV+ W ++GA G +
Sbjct: 370 RDNFH-NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 213/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I R +AL+ ++ M +GV D T+ VL A+ L + GR +H V
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G + + + S + +YSK G + A KVF+E P R L SW A+IAG Q R KEA+
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEAL 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G EP+ T+ S +AC LG L+ +H+YV +SK ++ + +L+D
Sbjct: 292 KVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYV--DRSKLGLNSKLGTALVD 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +D A VF ++ +V WT+MI G A G A +L+ F M S ++PN VT
Sbjct: 350 MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVLSAC HGG V EG F +M Y++EP HYGCMVDLLGRAG LEEA +E M
Sbjct: 410 FLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ +WG L C ++GE + HL +L+P G Y++L+N+Y+ WE
Sbjct: 470 PMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R +MK + + K PA S
Sbjct: 530 NVRRLMKGKGVDKSPACS 547
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 169/323 (52%), Gaps = 6/323 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN I+R ++ P+ L Y + GV+PD +T P++LKA +L E Q ++
Sbjct: 70 FLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAH 128
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ GL+ + F ++ +S ++ G + +R++F E ++ + SW A+I G ++GRA EA
Sbjct: 129 IVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEA 188
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F+ ++ G E D+VT+VSV A L D+ VH + + + D + ++L+
Sbjct: 189 LECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVE-SGRVIWDVYVGSALV 247
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG D A KVF E+ N+ SW ++I GY EAL F M GI PN
Sbjct: 248 DMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQS 307
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T L+AC G + +G+ E + ++ + + +VD+ + G ++EA + E
Sbjct: 308 TVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFE 365
Query: 386 GMPMKANVVIWGCLMGACEKFGN 408
+P K +V W ++ G+
Sbjct: 366 KLPAK-DVYPWTAMINGLAMRGD 387
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 122/279 (43%), Gaps = 31/279 (11%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
Q S+ + GL + F S L S D +FD + WN I+ S
Sbjct: 26 QTTSILITSGLAHHTFFLSDL--LRSATKDLGYTLLLFDRLATPYIFLWNTIVRSFSASS 83
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ + + + L+ G PD T + A L + E Q + ++ VK D +
Sbjct: 84 QPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHI--VKFGLDFDAFV 140
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
NSL+ + CG +D + ++F E + +V SWT++I G NG A EAL+CF MR SG+
Sbjct: 141 QNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGV 200
Query: 322 RPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ VT V VL A VHG V+ G+ +++ +VD+
Sbjct: 201 EVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG-----------SALVDM 249
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGA---CEKF 406
+ G ++A + MP + N+V WG L+ C ++
Sbjct: 250 YSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRY 287
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 223/383 (58%), Gaps = 12/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA----SCQLFALEIGRQLH 144
WN + R T ++ L +Y M+R GV D +T VLKA C + L G+++H
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ R G S+ + + + +Y++ G + A VF P R + SW+A+IA +++G+A
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 205 EAIDMFIGLKKCGFE--PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM- 261
EA+ F + + + P+ VTMVSV AC SL LE +H Y+ ++ D+++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL----RRGLDSILP 321
Query: 262 -LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+++L+ MYG+CG++++ +VF + +V SW S+I Y +G +A+ F M +G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P VTFV VL AC H G V+EGK FE M + I+P+ HY CMVDLLGRA L+EA
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
MV+ M + +WG L+G+C GNV++ E ++ L LEP + G YV+L++IYA
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 441 GLWEEVERIRAVMKHRNLAKIPA 463
+W+EV+R++ +++HR L K+P
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPG 524
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 25/326 (7%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H + G + + F + I +YS G + ARKVFD+ +R + WNA+ L+ G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC----GSLGDLELALQVHKYVFQVKSKQKS 257
+E + ++ + + G E D T V AC ++ L ++H ++ + S
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL--TRRGYSS 215
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF-HYM 316
++ +L+DMY + G +D A VF + NV SW++MI YA NG A EAL F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 317 RES-GIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
RE+ PN VT V VL AC +++GK H + + + + I P + +V + GR
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGR 332
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA---- 429
G LE + + + M + +VV W L+ + +G G+ + +E+ ++GA
Sbjct: 333 CGKLEVGQRVFDRMHDR-DVVSWNSLISS---YGVHGYGKKAIQIFEEM--LANGASPTP 386
Query: 430 --YVVLSNIYASRGLWEEVERIRAVM 453
+V + + GL EE +R+ M
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETM 412
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 227/411 (55%), Gaps = 33/411 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I Y R++ ++++++ + M R V P TL +VL A ++ ++ +++H
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE---------KARKV------------------- 178
E + E+ ++ Y+ G+ + KAR V
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 179 ---FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
FD+ P R SW +I G + G E++++F ++ G PD+ TMVSV +AC L
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + Y+ K+K K+D ++ N+LIDMY KCG + A KVF ++DQ + +WT+
Sbjct: 382 GSLEIGEWIKTYI--DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+VG A NG EA+ F M++ I+P+ +T++GVLSAC H G V + + FF M++ +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+IEP HYGCMVD+LGRAGL++EA ++ MPM N ++WG L+GA + M E
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELA 559
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
AK + ELEP + Y +L NIYA W+++ +R + + K P +SL
Sbjct: 560 AKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 171/334 (51%), Gaps = 35/334 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIGRQLHSLA 147
WNN+I+ +++++ + + +Y+ M + GV PD +T P +L AL G++LH
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL SN + ++ + +YS G + AR VFD + + SWN +I+G ++ +E+I
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + +++ P VT++ V SAC + D +L +VH+YV + K+ + + N+L++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT--EPSLRLENALVN 279
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTS-------------------------------M 296
Y CG MD+A ++F + +V SWTS M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY G NE+L+ F M+ +G+ P+ T V VL+AC H G ++ G+ + + + +
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNK 398
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
I+ ++D+ + G E+A+ + M +
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 141 RQLHSLAVRLGLESN-EFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+QLHS ++ G+ N F + F+ S+ G A K+F + PE + WN +I G S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKS 257
+ E + +++ + K G PD T + + G L ++H +V VK S
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV--VKFGLGS 168
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + N+L+ MY CG MD+A VF + +V SW MI GY E+++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+ + P VT + VLSAC K E + + EP +V+ G +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC-KTEPSLRLENALVNAYAACGEM 287
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ A + M + +V+ W ++ + GN+K+
Sbjct: 288 DIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA 321
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 211/363 (58%), Gaps = 2/363 (0%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
II Y+ + A++ +I + + PD L VL IG H ++ G
Sbjct: 311 IISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNG 370
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L ++ +G IS YS+ + A +F + E+ L +WN++I+G Q G++ +A+++F
Sbjct: 371 LTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFC 430
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ CG +PD +T+ S+ S C LG L + +H Y+ +++ K + +LIDMY K
Sbjct: 431 QMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYI--LRNNVKVEDFTGTALIDMYTK 488
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CGR+D A K+F+ I+ P + +W S+I GY+ GL ++A CF ++E G+ P+ +TF+GV
Sbjct: 489 CGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGV 548
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
L+AC HGG V G +F +M+ Y + P HY C+V LLGRAGL +EA ++ M ++
Sbjct: 549 LAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRP 608
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+ +WG L+ AC VK+GE +AK+L L + G YV LSN+YA G W++V R+R
Sbjct: 609 DSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDVARVRD 668
Query: 452 VMK 454
+M+
Sbjct: 669 MMR 671
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%), Gaps = 19/270 (7%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+ + ++ G++ + + I Y K G AR++F++ P + SWN +I G SQ
Sbjct: 63 NQIQTQLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQH 122
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK-YVFQVKSKQKSDT 259
G +A+ +F+ + + F P+ T+ S+ +CG EL LQ + F +K+ D
Sbjct: 123 GHPHDALQLFVHMLRESFRPNQTTIASLLPSCGR---RELFLQGRSVHAFGIKAGLGLDP 179
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N+L MY KC ++ + +F E+ + NV SW +MI Y NG ++A+ CF M +
Sbjct: 180 QLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKE 239
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD----LLGRAG 375
G +P+ VT + ++SA V E H Y I+ F +V L + G
Sbjct: 240 GWQPSPVTMMNLMSA----NAVPETVH-------CYIIKCGFTGDASVVTSLVCLYAKQG 288
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ A+ + E P K + + G + EK
Sbjct: 289 FTDMAKLLYECYPTKDLISLTGIISSYSEK 318
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 14/259 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ P AL +++ M R P+ T+ +L + + GR +H+ +
Sbjct: 112 WNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGI 171
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL + + S+Y+K D E ++ +F E E+ + SWN +I Q+G +A+
Sbjct: 172 KAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVL 231
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + K G++P VTM+++ SA + VH Y+ +K D ++ SL+ +
Sbjct: 232 CFKEMLKEGWQPSPVTMMNLMSANA------VPETVHCYI--IKCGFTGDASVVTSLVCL 283
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G D+A ++ ++ S T +I Y+ G A++CF + I+P+ V
Sbjct: 284 YAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVAL 343
Query: 329 VGVLSACVHGGKVQEGKHF 347
+ VL HG + + HF
Sbjct: 344 ISVL----HG--ISDPSHF 356
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 149/340 (43%), Gaps = 16/340 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + KA+ + M + G P T+ ++ A+ + +H +
Sbjct: 213 WNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSAN------AVPETVHCYII 266
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + + LY+K G + A+ +++ P + L S II+ S+ G + A++
Sbjct: 267 KCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVE 326
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
FI K +PD V ++SV + H Y +K+ +D L+ N LI
Sbjct: 327 CFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGY--GLKNGLTNDCLVANGLISF 384
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y + + A +F++ + + +W SMI G G +++A++ F M G +P+ +T
Sbjct: 385 YSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITI 444
Query: 329 VGVLSACVHGG--KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+LS C G ++ E H + + NV ++E ++D+ + G L+ A +
Sbjct: 445 ASLLSGCCQLGYLRIGETLHGYILRNNV-KVEDFTGT--ALIDMYTKCGRLDYAEKIFYS 501
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE--LEP 424
+ +V W ++ +G LQE LEP
Sbjct: 502 IN-DPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEP 540
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 49/287 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + A++++ M+ G PD T+ +L CQL L IG LH +
Sbjct: 409 WNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYIL 468
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R ++ +F + I +Y+K G + A K+F + L +WN+II+G S G +A
Sbjct: 469 RNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFG 528
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F L++ G EPD +T + V +AC G + ++ F++ K+
Sbjct: 529 CFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGME----YFRIMRKE------------- 571
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YG P + + ++ GL EA++ + M IRP+ +
Sbjct: 572 YGL---------------MPTLQHYACIVGLLGRAGLFKEAIEIINNME---IRPDSAVW 613
Query: 329 VGVLSACVHGGKVQEGK--------------HFFEMMKNVYQIEPRF 361
+LSAC +V+ G+ F+ + N+Y I R+
Sbjct: 614 GALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRW 660
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 215/362 (59%), Gaps = 10/362 (2%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL-HSLAVRLGLESNEFCESGFISLY 166
I+ ++G D Y L ++ +L L + RQ+ + VR N I+ Y
Sbjct: 32 IHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSL-----IAGY 86
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTM 225
S++GD E A ++F P R + SW +I+G SQ+G +A++MF+ ++K P++VT+
Sbjct: 87 SRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEMFLKMEKDKEVRPNEVTI 146
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
SV SAC LG LE+ ++ Y + + + N+L++MY +CG++D A VF EI
Sbjct: 147 ASVFSACAKLGALEVGERIESYA--RDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEI 204
Query: 286 -DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ N+ SW SM++G A +G +NEAL + M GI P+ VTFVG++ AC HGG V +G
Sbjct: 205 GKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKG 264
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
F+ M+ + I P+ HYGCMVDLLGRAG L+EA +V+ MPMK + VIWG L+GAC
Sbjct: 265 WQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVIWGTLLGACS 324
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
NV+ E A+ L ++EPW+ G YV+L NIYAS W+ V ++R +MK + K Y
Sbjct: 325 FHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKLMKGGQITKAAGY 384
Query: 465 SL 466
S+
Sbjct: 385 SV 386
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 213/379 (56%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + P AL + M G+ PD T+ + QL I R + +
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R L+ + + +++Y+K G A VFD+ P + SWN ++ G +Q+G A EAI
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D + +++C P+ T VS+ A +G L+ +++H + +K+ D + LI
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL--IKNSLYLDVFVATCLI 468
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGKCGR++ A +F+EI + W ++I +G EAL F M ++ +H+
Sbjct: 469 DLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI 528
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V EG+ F++M+ Y I+P HYGCMVDLLGRAG LE+A +V
Sbjct: 529 TFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRN 588
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG L+ AC+ +GN ++G + L E++ + G YV+LSNIYA+ WE V
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R++ + R L K P +S
Sbjct: 649 IKVRSLARDRGLRKTPGWS 667
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + AL + M GV D T+ +L Q + G +H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+S+ F + I++YSK G + A+ VFD+ R L SWN+IIA Q+ A+
Sbjct: 250 KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F G++ G PD +T+VS+TS L D ++ + +V + + K D ++ N+L++M
Sbjct: 310 FFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDK-DVVIGNALVNM 368
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVT 327
Y K G M+ A+ VF ++ + + SW +++ GY NGLA+EA+D ++ M E PN T
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V ++ A H G +Q+G K +++KN ++ A C++DL G+ G LE+A ++
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYE 486
Query: 387 MPMKANVVIWGCLMGA 402
+P +V W ++ +
Sbjct: 487 IPRDTSVP-WNAIIAS 501
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 10/325 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALD----IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F WN+II Y R +A++ ++ + PD YT P +LKA L G++
Sbjct: 86 FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKK 142
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H ++G E + F + + LYS+ G + A KVF + P + +GSWNA+I+G Q+G
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
A A+ + +K G + D +T+ S+ C D+ + +H +V +K SD +
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV--LKHGLDSDVFVS 260
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LI+MY K GR+ A VF +++ ++ SW S+I Y N + AL F M+ GIR
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ +T V + S + + + ++ +V++ + G + A
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 383 MVEGMPMKANVVIWGCLMGACEKFG 407
+ + +P K + + W L+ + G
Sbjct: 381 VFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH+L + G N + I+LY GD +R FD ++ + SWN+II+ +
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 201 GRAKEAIDMFIGL-KKCG---FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
G+ EA++ L CG PD T + AC SL D +VH VF K +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVF--KMGFE 153
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + SL+ +Y + G +D+A+KVF ++ +V SW +MI G+ NG A AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
+ G++ + +T +L C V G ++K + ++ ++++ + G
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNALINMYSKFG 271
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEK 405
L++A+ + + M ++ ++V W ++ A E+
Sbjct: 272 RLQDAQMVFDQMEVR-DLVSWNSIIAAYEQ 300
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/305 (41%), Positives = 196/305 (64%), Gaps = 2/305 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ Y K G+ E AR +FDE PE+ + +WN +IAG G ++A++MF ++ G PD+
Sbjct: 217 ITGYVKNGEMENARTLFDEAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDE 276
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VTM+S+ SAC LGDL++ ++H + ++ ++ L+ N+L+DMY KCG +++A +VF
Sbjct: 277 VTMLSLLSACADLGDLQVGRKLHCSISEM-TRGDLSVLLGNALVDMYAKCGSIEIALQVF 335
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKV 341
++ + +V++W S+I G A +G A E++ F M+ I+PN +TFVGV+ AC H G V
Sbjct: 336 KKMREKDVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNV 395
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+EG+ +F++M+ Y IEP H+GCMVDLLGRAGLL EA ++ M ++ N +IW L+G
Sbjct: 396 EEGRRYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLG 455
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC GNV++G + L +L G YV+LSNIYAS G W+ E +R +M + K
Sbjct: 456 ACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKE 515
Query: 462 PAYSL 466
SL
Sbjct: 516 AGRSL 520
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 125 PIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFC--ESGFISLYSKAGDFEKARKVFDE 181
P L +C L AL +Q+H+ + G SN E F + +G A +VF +
Sbjct: 16 PSSLWKNCNNLLAL---KQIHATLIIKGFNSNRAALRELIFAGAMTISGAINYAHQVFAQ 72
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
E + WN ++ G SQ + + ++ ++ G +PD T + C L +
Sbjct: 73 ITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKGCTRLEWRKTG 132
Query: 242 LQVH----KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
VH KY F+V S + N+LI + CG + +A +F+++ + +V SW+++
Sbjct: 133 FCVHGKVLKYGFEVNS------FVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSWSALT 186
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVY 355
GYA G A F M + V++ +++ V G+++ + F+ K+V
Sbjct: 187 AGYARRGELGVARQIFDEMPVKDL----VSWNVMITGYVKNGEMENARTLFDEAPEKDVV 242
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
A Y + + EE R + E P + ++ L+ AC G++++G
Sbjct: 243 TWNTMIAGYVLRGEQRQALEMFEEMRNVGE-CPDEVTML---SLLSACADLGDLQVG 295
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 46/225 (20%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G ++ A++VF +I +P++ W +M+ G + + ++ + + M G++P+ TF +L
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 333 SA-----------CVHGGKVQEGKHFFEMMKNV------------------YQIEPR-FA 362
CVHG ++ G ++N Y + R
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV-AKHLQE 421
+ + R G L AR + + MP+K ++V W ++ G VK GE A+ L +
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVK-DLVSWNVMIT-----GYVKNGEMENARTLFD 234
Query: 422 LEPWSDGAYVVLSNI----YASRGLWEEVERIRAVMKHRNLAKIP 462
P D VV N Y RG E+ + + + RN+ + P
Sbjct: 235 EAPEKD---VVTWNTMIAGYVLRG--EQRQALEMFEEMRNVGECP 274
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 211/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y++ E K+A+ ++ M V PD TL I+L + + LE GRQ+H+++
Sbjct: 358 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQ 417
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + SG I +YSK G E A+++FD E + WN+++AGLS + KEA
Sbjct: 418 KAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFT 477
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ G P + +V S C L L QVH + + +D + ++LIDM
Sbjct: 478 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQI--AREGYMNDAFVGSALIDM 535
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A VF + N +W MI GYA NG +EA+ + M SG +P+ +TF
Sbjct: 536 YSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITF 595
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL+AC H G V G F M+ + +EP HY C++D LGRAG L EA +++ MP
Sbjct: 596 VAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMP 655
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K + +IW L+ +C + +V + A+ L L+P + YV+L+NIY+S G W++ +
Sbjct: 656 CKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKA 715
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + + K P YS
Sbjct: 716 VRELMSYNQVVKDPGYS 732
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 135/283 (47%), Gaps = 18/283 (6%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASC-QLFALEIGRQLH 144
+ WN I+ Y + + A ++ M ++ + + +C L +E GR+ H
Sbjct: 72 YTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCH 131
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+++++GL++N + + + +Y+K A + F + PE S+ A++ GL+ +
Sbjct: 132 GISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVN 191
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL--------------QVHKYVFQ 250
EA +F + + D V++ SV C G E L QVH
Sbjct: 192 EAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH--CLT 249
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+K +SD + NSL+DMY K G MD A +F + + +V SW MI GY +++A+
Sbjct: 250 IKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAI 309
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
+ M+ G P+ +T+V +L AC+ G ++ G+ F+ M +
Sbjct: 310 EYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS 352
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 137/315 (43%), Gaps = 55/315 (17%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVL----KASCQLFALEI----------GRQLHSLAV 148
+A ++ M R + D +L VL + C F L G+Q+H L +
Sbjct: 191 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 250
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ + + +Y+K G+ + A +F PE + SWN +IAG Q ++ +AI+
Sbjct: 251 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 310
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ GFEPD++T V++ AC GD+E Q
Sbjct: 311 YLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ------------------------- 345
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+F + P++SSW +++ GY+ N EA+ F M+ + P+ T
Sbjct: 346 ------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTL 393
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+LS+ ++ G+ + K V++ + A ++ + + G +E A+ + + +
Sbjct: 394 AIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLA--SGLIGMYSKCGKVEMAKRIFDRI 451
Query: 388 PMKANVVIWGCLMGA 402
+ ++V W +M
Sbjct: 452 A-ELDIVCWNSMMAG 465
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 21/299 (7%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ +H+ +R L + F + I Y+K + +R++FD+ P+R + +WNAI+ +
Sbjct: 24 GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVT--SACGSLGDLELALQVHKYVFQVKSKQKS 257
++A +F + + + + ++T ACG+L D+E + H +K +
Sbjct: 84 ASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHG--ISIKIGLDN 141
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + N+L+ MY KC + A + F ++ +PN S+T+M+ G A + NEA F M
Sbjct: 142 NIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLML 201
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE--MMKNVY--QIEPRFAHYG-------- 365
+ I + V+ VL C GG + G H + +V+ Q+ +G
Sbjct: 202 RNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLN 261
Query: 366 -CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++D+ + G ++ A + MP + +VV W ++ +G ++LQ ++
Sbjct: 262 NSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRMQ 316
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/382 (37%), Positives = 211/382 (55%), Gaps = 13/382 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y ++AL ++ M R G P+ T+ V + L+ GR+ +
Sbjct: 274 WNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIR 333
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L+ N + + +Y K ++AR FD P R + +W+ +IAG SQ+GR E+++
Sbjct: 334 EEDLQ-NVIVHTALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLE 392
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS---- 264
+F +K +P++VT+V V SAC LG EL Q+ Y+ +S TL L S
Sbjct: 393 LFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYI-------ESQTLPLTSYLGS 445
Query: 265 -LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
LIDMY KCG + A VF ++Q V +W SMI G A NG A +A+ + M GI+P
Sbjct: 446 ALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQP 505
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N VTFV +L+AC H G V +G FFE MK + P+ H C+VDLL ++G L EA
Sbjct: 506 NEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKF 565
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ M ++ N VIW L+ AC +V++ + A L LEP + YV+LSNIYA GLW
Sbjct: 566 ICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLW 625
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
+V IR +M+ +NL K+ AYS
Sbjct: 626 GDVREIRDLMRSKNLQKLSAYS 647
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 158/319 (49%), Gaps = 39/319 (12%)
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY------- 166
R G +P +P+VLK+ Q A G Q H A+ G+ + F ++ + Y
Sbjct: 168 RGGAIPS-GCIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMD 226
Query: 167 ------------------------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
SK+GD E+AR++FD P R SWN++IA + G
Sbjct: 227 SALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGE 286
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+EA+ +F + + G P+ +T+ +V S C GDL+ + + ++ + + ++
Sbjct: 287 FREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTGRRARAW---IREEDLQNVIVH 343
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+L++MY KC +D A F + + +V +W++MI GY+ NG +E+L+ F M+ + +
Sbjct: 344 TALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCK 403
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEAR 381
PN VT VGVLSAC G + G+ +++ Q P ++ G ++D+ + G + AR
Sbjct: 404 PNEVTLVGVLSACAQLGSDELGEQIGNYIES--QTLPLTSYLGSALIDMYTKCGHVARAR 461
Query: 382 AMVEGMPMKANVVIWGCLM 400
++ M K VV W ++
Sbjct: 462 SVFNRMEQKV-VVTWNSMI 479
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+L S A + AR +FD P A ++GLS+ +E I++ L + G
Sbjct: 116 ALLSNASTYRAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSG 175
Query: 224 TMVSVTSAC-------------------GSLGDL--ELAL--------QVHKYVFQVKSK 254
+ V +C G LGD+ + AL + + K
Sbjct: 176 CIPLVLKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEM 235
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
D + +N LI Y K G ++ A ++F + + +SW SMI YA G EAL F
Sbjct: 236 PVKDPIPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFD 295
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M G PN +T V S C G + G+ ++ ++ H M ++ +
Sbjct: 296 QMLREGASPNAITITTVFSICAKTGDLDTGRRARAWIRE-EDLQNVIVHTALM-EMYVKC 353
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++EAR + MP + +VV W ++ + G
Sbjct: 354 RAIDEARHEFDRMPRR-DVVAWSTMIAGYSQNG 385
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 238/424 (56%), Gaps = 10/424 (2%)
Query: 38 SAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYT 97
S F+ +E A +KC +L ++++ I R+ ++S WN +I Y+
Sbjct: 418 SLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSI-RSKTVNS------WNALIGGYS 470
Query: 98 RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF 157
+ P+ +LD Y M +G+LPD +T+ +L A Q+ +L++G+++H L +R LE + F
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530
Query: 158 CESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
+SLY G+ A +FD ++ L SWN ++ G Q+G + A+ +F + G
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG 590
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
+P +++M+SV AC L L L + H Y +K + + + S+IDMY K G +
Sbjct: 591 VQPCEISMMSVFGACSLLPSLRLGREAHGYA--LKCLLEDNAFIACSVIDMYAKNGSVME 648
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
++KVF + + +V+SW +M++GY +G A EA+ F M+ +G P+ +TF+GVL+AC H
Sbjct: 649 SFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNH 708
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIW 396
G V EG + + MK ++ + P HY C++D+L RAG L+EA + E M + V IW
Sbjct: 709 SGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIW 768
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
L+ +C N++MGE +A L EP YV+LSN+YA G W+EV ++R MK
Sbjct: 769 NFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEM 828
Query: 457 NLAK 460
+L K
Sbjct: 829 SLRK 832
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 14/289 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +I Y+R E L++++ M + +G+LPD +T P V+KA + +++G +H
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L V+ L + F + +S Y G A +VF PER L SWN++I S +G ++E
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268
Query: 206 AI----DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
M + F PD T+ +V C ++ + VH ++ + + ++
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDK--EVVV 326
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG- 320
N+L+DMY KCG ++ A +F + NV SW +M+ G++A G ++ D M G
Sbjct: 327 NNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGG 386
Query: 321 -IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
+R + VT + + C + K + Y ++ F H +V
Sbjct: 387 DLRADEVTILNAVPVCFEESVLPNLKEL-----HCYSLKQEFVHNNELV 430
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNE--FCESGFISLYSKAGDFEKARKVFDENPERK 186
+AS + +++GR++H L SN+ C + I++YS G + +R VFD ++
Sbjct: 89 QASGRRKDIQLGRKIHQLVSESARLSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKN 147
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
L WNA+I+ S++ ++MF+ + + G PD+ T V AC + ++++ L VH
Sbjct: 148 LFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVH 207
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
V VK++ D + N+L+ YG G + A +VF + + N+ SW SMI ++ NGL
Sbjct: 208 GLV--VKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGL 265
Query: 306 ANEALDCFHYMRES----GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF 361
+ E M E P+ T VL C ++ GK + + ++
Sbjct: 266 SEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKL-SLDKEV 324
Query: 362 AHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
++D+ + G + +A+ + + + NVV W ++G G++
Sbjct: 325 VVNNALMDMYSKCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDI 371
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 213/379 (56%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y + P AL + M G+ PD T+ + QL I R + +
Sbjct: 291 WNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVI 350
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R L+ + + +++Y+K G A VFD+ P + SWN ++ G +Q+G A EAI
Sbjct: 351 RREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAI 410
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
D + +++C P+ T VS+ A +G L+ +++H + +K+ D + LI
Sbjct: 411 DAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKL--IKNSLYLDVFVATCLI 468
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGKCGR++ A +F+EI + W ++I +G EAL F M ++ +H+
Sbjct: 469 DLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHI 528
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V EG+ F++M+ Y I+P HYGCMVDLLGRAG LE+A +V
Sbjct: 529 TFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRN 588
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP++ + IWG L+ AC+ +GN ++G + L E++ + G YV+LSNIYA+ WE V
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R++ + R L K P +S
Sbjct: 649 IKVRSLARDRGLRKTPGWS 667
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + AL + M GV D T+ +L Q + G +H +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+S+ F + I++YSK G + A+ VFD+ R L SWN+IIA Q+ A+
Sbjct: 250 KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALR 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F G++ G PD +T+VS+TS L D ++ + +V + + K D ++ N+L++M
Sbjct: 310 FFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDK-DVVIGNALVNM 368
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVT 327
Y K G M+ A+ VF ++ + + SW +++ GY NGLA+EA+D ++ M E PN T
Sbjct: 369 YAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGT 428
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V ++ A H G +Q+G K +++KN ++ A C++DL G+ G LE+A ++
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVA--TCLIDLYGKCGRLEDAMSLFYE 486
Query: 387 MPMKANVVIWGCLMGA 402
+P +V W ++ +
Sbjct: 487 IPRDTSVP-WNAIIAS 501
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 10/325 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKALD----IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F WN+II Y R +A++ ++ + PD YT P +LKA L G++
Sbjct: 86 FSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKK 142
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H ++G E + F + + LYS+ G + A KVF + P + +GSWNA+I+G Q+G
Sbjct: 143 VHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGN 202
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
A A+ + +K G + D +T+ S+ C D+ + +H +V +K SD +
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV--LKHGLDSDVFVS 260
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LI+MY K GR+ A VF +++ ++ SW S+I Y N + AL F M+ GIR
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIR 320
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ +T V + S + + + ++ +V++ + G + A
Sbjct: 321 PDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHT 380
Query: 383 MVEGMPMKANVVIWGCLMGACEKFG 407
+ + +P K + + W L+ + G
Sbjct: 381 VFDQLPRK-DTISWNTLVTGYTQNG 404
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH+L + G N + I+LY GD +R FD ++ + SWN+II+ +
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98
Query: 201 GRAKEAIDMFIGL-KKCG---FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
G+ EA++ L CG PD T + AC SL D +VH VF K +
Sbjct: 99 GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVF--KMGFE 153
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + SL+ +Y + G +D+A+KVF ++ +V SW +MI G+ NG A AL + M
Sbjct: 154 DDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM 213
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
+ G++ + +T +L C V G ++K + ++ ++++ + G
Sbjct: 214 KGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVSNALINMYSKFG 271
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEK 405
L++A+ + + M ++ ++V W ++ A E+
Sbjct: 272 RLQDAQMVFDQMEVR-DLVSWNSIIAAYEQ 300
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 219/383 (57%), Gaps = 8/383 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR Y R + A+++Y M G + PD +T P VLKA L L GR++H
Sbjct: 136 FLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREVHD 195
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R ++ F +G I +Y+K G ++A VF++ R WN++IA Q+GR E
Sbjct: 196 RVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNGRPAE 255
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ--VKSKQKSDTLMLN 263
A+ + + G P T+VS SA L ++H Y ++ S+ K T
Sbjct: 256 ALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDKLKT---- 311
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIR 322
SL+DMY K G + +A+ +F ++ + SW +MI G+ +G A+ A + F MR E+ +
Sbjct: 312 SLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFELFSRMRSEAQVM 371
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+TFVGVLSAC HGG VQE K F++M VY I+P HY C+VD+LG +G +EA
Sbjct: 372 PDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDVLGHSGRFKEASD 431
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+++GM +K + IWG L+ C+ NV++ E + L ELEP G YV+LSNIYA G
Sbjct: 432 VIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVLLSNIYAESGK 491
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WEE R+R +M +R L KI A S
Sbjct: 492 WEEAARVRKLMTNRGLKKIIACS 514
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 4/204 (1%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER- 185
+L++ A+ GRQLH+ + G + + + LY+ G AR+VFDE P +
Sbjct: 74 ILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPNQG 133
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQV 244
+ WN +I ++DG + AI+++ + G +PD+ T V AC +L DL +V
Sbjct: 134 NVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGREV 193
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H V +++ +D + LIDMY KCG MD A+ VF + + + W SMI NG
Sbjct: 194 HDRV--MRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQNG 251
Query: 305 LANEALDCFHYMRESGIRPNHVTF 328
EAL M GI P T
Sbjct: 252 RPAEALTLCRNMAAEGIAPTIATL 275
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 212/378 (56%), Gaps = 11/378 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR Y A+ +Y M G+ PD +TLP VLKA L A+ GR +H
Sbjct: 114 FLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEY 173
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G E + F + I +Y+K G A +VFD+ R WN+++A +Q+G E+
Sbjct: 174 VIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDES 233
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH----KYVFQVKSKQKSDTLML 262
I + + G P + T+V+V S+ + L ++H ++ FQ K K+
Sbjct: 234 ISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT----- 288
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+LIDMY KCG + +A +F + + V SW ++I GYA +GLA ALD F MR+ R
Sbjct: 289 -ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-R 346
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+TFVGVL+AC G + EG+ + +M Y I P HY CM+DLLG G L+EA
Sbjct: 347 PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYD 406
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ M +K + +WG L+ +C+ GNV++ E + L ELEP G YV+L+N+YA G
Sbjct: 407 LIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGK 466
Query: 443 WEEVERIRAVMKHRNLAK 460
WE VE++R VM + + K
Sbjct: 467 WEGVEKLRQVMIDKRIKK 484
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 140/287 (48%), Gaps = 20/287 (6%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
Y +L++ AL G+QLH+ LG+ N+ + + LY+ + AR +FD+
Sbjct: 48 YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDK 107
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P++ L WN +I G + +G AI ++ + G PD+ T+ V AC +L +
Sbjct: 108 IPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEG 167
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H+YV +KS + D + +LIDMY KCG + A +VF +I + W SM+ YA
Sbjct: 168 RSIHEYV--IKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYA 225
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLS-----ACVHGGKVQEG---KHFFEMMKN 353
NG +E++ M +G+RP T V V+S AC+ G+ G +H F+
Sbjct: 226 QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDK 285
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
V ++D+ + G ++ A A+ E + K VV W ++
Sbjct: 286 VKT---------ALIDMYAKCGSVKVALALFERLREK-RVVSWNAII 322
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 195/311 (62%), Gaps = 2/311 (0%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N F + I + + G +A +VFDE PER + SW +I G + G +EA++ F ++
Sbjct: 78 NSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQ 137
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
EPD VT+V+V SAC +LG L L L VH+Y +K + + + NSLID+Y +CG
Sbjct: 138 VSKVEPDRVTIVTVLSACANLGALGLGLWVHRYA--LKKGLRDNVKICNSLIDLYSRCGA 195
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
++LA +VF ++ + + SW S+I G AANG EAL+ F M++ G +PN V+F G L+A
Sbjct: 196 IELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQGFKPNDVSFTGALTA 255
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G V EG +F++M+ V++I PR HYGC+VDL RAG LE+A ++V+ MPMK N V
Sbjct: 256 CSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEV 315
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
+ G L+ AC G+V++ E + +L L+P +D YV+LSNIYA+ G W+ + R MK
Sbjct: 316 VVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVGRWDGACKQRMTMK 375
Query: 455 HRNLAKIPAYS 465
+ K P +S
Sbjct: 376 ALGIQKKPGFS 386
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 127/250 (50%), Gaps = 6/250 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + ++ ++AL+ + M + V PD T+ VL A L AL +G +H A+
Sbjct: 113 WTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYAL 172
Query: 149 RLGLESN-EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ GL N + C S I LYS+ G E AR+VF++ ER L SWN+II GL+ +G +EA+
Sbjct: 173 KKGLRDNVKICNS-LIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEAL 231
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ F ++K GF+P+DV+ +AC G ++ L+ + +V K ++D
Sbjct: 232 EHFDLMQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVH-KISPRIEHYGCIVD 290
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYM--RESGIRPN 324
+Y + GR++ A V + +PN S++ G A +Y+ + G N
Sbjct: 291 LYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSN 350
Query: 325 HVTFVGVLSA 334
+V + +A
Sbjct: 351 YVLLSNIYAA 360
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMD 276
+P+ VT +++ S C L +L + + K + LM+ + L+DMY KCG ++
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVE 65
Query: 277 L-------------------------------AYKVFWEIDQPNVSSWTSMIVGYAANGL 305
L A +VF E+ + V SWT +I G+ GL
Sbjct: 66 LSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGL 125
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG--KHFFEMMKNVYQIEPRFAH 363
EAL+ F M+ S + P+ VT V VLSAC + G + G H + + K +
Sbjct: 126 FEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKG---LRDNVKI 182
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++DL R G +E AR + E M + +V W ++G
Sbjct: 183 CNSLIDLYSRCGAIELARQVFEKMGERT-LVSWNSIIGG 220
>gi|225428400|ref|XP_002283651.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
gi|297744424|emb|CBI37686.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 227/399 (56%), Gaps = 8/399 (2%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVL 128
YAH+I + L + ++ FH N +IR Y++ P +AL +++ M PD +T P +L
Sbjct: 46 YAHLI-LNSLSTQNSFFH-NTMIRAYSQTPDPTQALHLFLSMLCQPTSPRPDKFTYPFLL 103
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
K+ +L +G+QLH L + GLES+ + +G I +YS G +A KVF + +R +
Sbjct: 104 KSCARLKQPRVGKQLHGLIYKSGLESDRYVSNGLIHMYSSCGKSGRAYKVFGKMRDRDVV 163
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
SW ++I G D RA EAI +F + + G EP++ T+VSV AC G + + +V +
Sbjct: 164 SWTSMIDGFVDDDRALEAIRLFEEMVEDGVEPNEATVVSVLRACADAGAVGMGRRVQGVI 223
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
+ K +++ + +LIDMY KCG + A KVF I +V +WT+MI G A +GL E
Sbjct: 224 EERKIGLEAN--VRTALIDMYAKCGSIGSARKVFDGIVNKDVFAWTAMISGLANHGLCEE 281
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
A+ F M G+RP+ T VLSAC + G EG +F M Y I+P HYGCMV
Sbjct: 282 AVTLFDQMESFGLRPDERTMTAVLSACRNAGWFSEGFAYFNSMWCKYGIKPTIQHYGCMV 341
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD- 427
DLL R G L+EA + MP++ +VV+W L+ A + G++ E + K L+ SD
Sbjct: 342 DLLARTGHLDEAEEFIRKMPIEPDVVLWRTLIWASKVHGDIDRSEQLMKDRGLLKMDSDD 401
Query: 428 -GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+YV+L N+YAS G W + ++R +M + L+K P S
Sbjct: 402 CGSYVLLGNVYASAGKWHDKAKMRELMNQKGLSKPPGCS 440
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 211/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ Y++ E K+A+ ++ M V PD TL I+L + + LE GRQ+H+++
Sbjct: 387 WNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQ 446
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + SG I +YSK G E A+++FD E + WN+++AGLS + KEA
Sbjct: 447 KAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFT 506
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F +++ G P + +V S C L L QVH + + +D + ++LIDM
Sbjct: 507 FFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQI--AREGYMNDAFVGSALIDM 564
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A VF + N +W MI GYA NG +EA+ + M SG +P+ +TF
Sbjct: 565 YSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITF 624
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL+AC H G V G F M+ + +EP HY C++D LGRAG L EA +++ MP
Sbjct: 625 VAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMP 684
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
K + +IW L+ +C + +V + A+ L L+P + YV+L+NIY+S G W++ +
Sbjct: 685 CKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKA 744
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M + + K P YS
Sbjct: 745 VRELMSYNQVVKDPGYS 761
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 141/279 (50%), Gaps = 16/279 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I TR +KAL +Y MSR G +P +TL VL A L +E GR+ H +++
Sbjct: 105 WNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISI 164
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL++N + + + +Y+K A + F + PE S+ A++ GL+ + EA
Sbjct: 165 KIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFR 224
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL--------------QVHKYVFQVKSK 254
+F + + D V++ SV C G E L QVH +K
Sbjct: 225 LFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVH--CLTIKHG 282
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+SD + NSL+DMY K G MD A +F + + +V SW MI GY +++A++
Sbjct: 283 FESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQ 342
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
M+ G P+ +T+V +L AC+ G ++ G+ F+ M +
Sbjct: 343 RMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS 381
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 148/317 (46%), Gaps = 9/317 (2%)
Query: 81 HSYSAAFHWNN-IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
H + + H NN ++ +Y + A I++ M V+ + + S A+E
Sbjct: 281 HGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEY 340
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+++ G E +E + K+GD E R++FD L SWN I++G SQ
Sbjct: 341 LQRMQ----YHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQ 396
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+ KEA+ +F ++ PD T+ + S+ + LE QVH K+ ++D
Sbjct: 397 NENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVH--AVSQKAVFRTDI 454
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ + LI MY KCG++++A ++F I + ++ W SM+ G + N L EA F MRE
Sbjct: 455 YLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREK 514
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ ++ VLS C + +G+ + + F ++D+ + G ++
Sbjct: 515 GMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVG-SALIDMYSKCGDVDA 573
Query: 380 ARAMVEGMPMKANVVIW 396
AR + + M + N V W
Sbjct: 574 ARWVFD-MMLGKNTVTW 589
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 19/277 (6%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ + Y KA + E A +F E PER + SWN +I+ L+++G ++A+ ++ + + GF
Sbjct: 75 NAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFV 134
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P T+ SV SACG+L D+E + H +K ++ + N+L+ MY KC + A
Sbjct: 135 PTHFTLASVLSACGALVDVECGRRCHG--ISIKIGLDNNIYVGNALLGMYAKCRCIGDAI 192
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+ F ++ +PN S+T+M+ G A + NEA F M + I + V+ VL C GG
Sbjct: 193 QAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGG 252
Query: 340 KVQEGKHFFE--MMKNVY--QIEPRFAHYG---------CMVDLLGRAGLLEEARAMVEG 386
+ G H + +V+ Q+ +G ++D+ + G ++ A +
Sbjct: 253 CGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVN 312
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
MP + +VV W ++ +G ++LQ ++
Sbjct: 313 MP-EVSVVSWNVMIAG---YGQKSQSSKAIEYLQRMQ 345
>gi|242054799|ref|XP_002456545.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
gi|241928520|gb|EES01665.1| hypothetical protein SORBIDRAFT_03g038140 [Sorghum bicolor]
Length = 640
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 220/384 (57%), Gaps = 11/384 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N++I P + ++ M A V D TL ++ A+ L + Q+H+LA
Sbjct: 128 FNSVISGCALHALPVASFALFRRMRAAAVGFDAVTLLALVPAT----PLSVVPQVHALAA 183
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKA--RKVFDENP--ERKLGSWNAIIAGLSQDGRAK 204
R+GL + + +S Y++ G F A R+VFDE P R L SWNA+++ +Q+G A
Sbjct: 184 RVGLATETSVANCLMSTYARGGAFGAALARRVFDEMPLASRDLVSWNAVLSAHAQNGLAV 243
Query: 205 EAIDMFIGLKK---CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A++++ ++ G EPD VT+V V S+ LG + V YV Q ++ +
Sbjct: 244 DALELYRRMRSPEGSGVEPDAVTIVGVLSSAAHLGARGVGFDVEHYVRQRIPGFHTNVQL 303
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+LI+ + +CG + A ++F E+ + ++ SWT++I G+ +G + A+ F M GI
Sbjct: 304 CNALINFHARCGSLPRAQQLFDEMPRKSIVSWTALITGHGMHGNGDVAVSLFERMVSEGI 363
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RP++V V + SAC H G EG+ +F M++VY++ P HY CMVDLLGRAG LEEAR
Sbjct: 364 RPDNVAMVALFSACSHAGLYDEGRRYFSAMESVYKLRPTLEHYTCMVDLLGRAGRLEEAR 423
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
++ MPM A+ +WG L+GAC+ NV +GE + ELEP + G YV++SNIY G
Sbjct: 424 ELISSMPMPADGAVWGALLGACKIHKNVDVGEEAFTRVIELEPKNVGYYVLMSNIYTDTG 483
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
+ V R+RA+M+ R L K P S
Sbjct: 484 QLDCVARVRAMMRERGLKKEPGCS 507
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 192/306 (62%), Gaps = 2/306 (0%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ I+ Y K G +KA+ +FD+ P R L SWNA+I G +Q+G +EA+ + + K G +
Sbjct: 237 TAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQ 296
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD T++SV +AC SL L+ + H V +KS +S + N+LI MY KCG + +
Sbjct: 297 PDHSTLISVLTACSSLASLQEGRKTH--VLVLKSGYESRISICNALITMYCKCGSILDSE 354
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
F +ID P+V SW +MI +A +G + AL F MR + + P+ +TF+ +LSAC H G
Sbjct: 355 LAFRQIDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAG 414
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
KV E ++F M Y+I R H+ C+VD+L R G +E+A +++ MP +A+ IWG L
Sbjct: 415 KVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIWGAL 474
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC NVK+GE AK + ELEP + GAYVVLSNIYA+ G+W EV R+R +M+ + +
Sbjct: 475 LAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVK 534
Query: 460 KIPAYS 465
K PAYS
Sbjct: 535 KQPAYS 540
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 3/198 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + ++AL ++ M + G+ PD TL VL A L +L+ GR+ H L +
Sbjct: 267 WNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVL 326
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES + I++Y K G + F + + SWNA+IA ++ G A+
Sbjct: 327 KSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFARHGFYDRALA 386
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ-VHKYVFQVKSKQKSDTLMLNSLID 267
F ++ EPD +T +S+ SACG G + +L + + K + + L+D
Sbjct: 387 SFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIXSYKIVXRPEHFAC--LVD 444
Query: 268 MYGKCGRMDLAYKVFWEI 285
+ + G+++ AYK+ E+
Sbjct: 445 ILSRGGQVEKAYKIIQEM 462
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 35/291 (12%)
Query: 121 CYTLPIVLKASCQLFAL-------EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
C++ P L S + RQ H L+++L + + + I ++AG+
Sbjct: 5 CFSPPCFLPRSPSIIRTIFLPIFHSFNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIG 64
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD--VTMVSVTSA 231
AR+VFDE P R SWN+II G ++G E+ +F G P V+ S+ +
Sbjct: 65 AARQVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLF------GLMPTKNVVSWNSMIAG 118
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C ++ A Q + + Q +T N++I + R++ A ++F E+ + NV
Sbjct: 119 CIEDERIDEAWQYFQAMPQ------RNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVI 172
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
S+T+M+ GYA G +A F+ M + + V++ ++S V GK E ++ FE M
Sbjct: 173 SYTAMVDGYAKIGEIEQARALFNCMPQKNV----VSWTVMISGYVENGKFDEAENLFEQM 228
Query: 352 --KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
KN+ + M+ + G ++A+ + + +P + ++ W ++
Sbjct: 229 PDKNIVAM-------TAMITGYCKEGKTDKAKILFDQIPCR-DLASWNAMI 271
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT+ NS+I Y K G D + ++F + NV SW SMI G + +EA F M
Sbjct: 77 DTVSWNSIITGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMP 136
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM--KNVY-------------QIEPRFA 362
+ N ++ ++S V +V+E FE M +NV +IE A
Sbjct: 137 QR----NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQARA 192
Query: 363 HYGCM---------VDLLG--RAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
+ CM V + G G +EA + E MP K V + + G C++ K
Sbjct: 193 LFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK- 251
Query: 412 GEWVAKHLQELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVM 453
AK L + P D ++ + YA G EE ++ + M
Sbjct: 252 ----AKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQM 290
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 227/449 (50%), Gaps = 48/449 (10%)
Query: 64 LLQLNQIYAHII-------------RTHMLHSYSAAFHWNNIIRLYTRLEAP-KKALDIY 109
L QLNQI +H + R +N +I+ Y+ L P +++ ++
Sbjct: 37 LNQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYS-LNGPFEESFRLF 95
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M G+ PD YTL +LKA L L++G+ +H + +G E G I LYS
Sbjct: 96 SSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSC 155
Query: 170 GDFEKARKVFDENPER-------------KLG------------------SWNAIIAGLS 198
G E A KVFDE +R K G SWN +I+ L+
Sbjct: 156 GVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRSVVSWNIMISCLA 215
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q R EA+ +F + GF+PD+ T+V+V C LG +++ +H Y + +
Sbjct: 216 QSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYA-KSSGLYRDF 274
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ N+L+D Y K G + A +VF E+ + NV SW ++I G A NG ++ M
Sbjct: 275 VAVGNALVDFYNKSGMFETARRVFDEMPRKNVISWNTLISGLALNGNGELGVELLEEMMN 334
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
G+RPN TFVGVLS C H G + G+ M +QIEP+ HYGCMVDLLGR+G +
Sbjct: 335 EGVRPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVR 394
Query: 379 EARAMVEGMPMKA-NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EA ++ MP A N +WG L+ AC G+V++ K L +LEPW+ G YV+LSN+Y
Sbjct: 395 EAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMY 454
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A W++V +R +M+ +N+ K P S+
Sbjct: 455 AEEERWDKVANVRGMMREKNVKKTPGQSV 483
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 152/345 (44%), Gaps = 35/345 (10%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R++H+ +R GL S F+S+ A ++F + + +NA+I G S +
Sbjct: 26 REIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQTQNPTIILFNAMIKGYSLN 85
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +E+ +F +K G PD+ T+ + AC SLG L+L +HK V V + S
Sbjct: 86 GPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIR 145
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN------------- 307
+ +I++Y CG M+ A KVF E+ Q +V W MI G+ G +
Sbjct: 146 I--GVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFCKRGDVDMGLCLFRQMRKRS 203
Query: 308 ------------------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
EAL FH M + G +P+ T V VL C G V GK
Sbjct: 204 VVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHS 263
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
K+ A +VD ++G+ E AR + + MP K NV+ W L+ GN
Sbjct: 264 YAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRK-NVISWNTLISGLALNGNG 322
Query: 410 KMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
++G E + + + E +D +V + + A GL+E + A M
Sbjct: 323 ELGVELLEEMMNEGVRPNDATFVGVLSCCAHAGLFERGRELLASM 367
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/378 (37%), Positives = 215/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W +I ++ + + P +A+ ++ M ++ V P+ TL VL A + L + +++H
Sbjct: 154 WATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYI 213
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G + + + +Y K G + AR +FD+ E+ L SWN +I G +D +EA+
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ G + D VTM S+ AC LG LEL +H Y+ K + D + +L+D
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYI--KKQRIDVDVALGTALVD 331
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG ++ A +VF E+ + +V +WT++I+G A G A AL F M G++P+ +T
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAIT 391
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FVGVL+AC H G V EG F M + Y I+P HYG +VD+LGRAG + EA +++ M
Sbjct: 392 FVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM + + G L+GAC GN++ E AK L E++P+ G YV+LSNIY S WEE +
Sbjct: 452 PMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAK 511
Query: 448 RIRAVMKHRNLAKIPAYS 465
R R +M R + K P S
Sbjct: 512 RTRELMAERGMRKPPGCS 529
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 179/332 (53%), Gaps = 12/332 (3%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YA ++ + + + S + N+IIR T ++AL Y M G++PD YT P + K
Sbjct: 40 YARLVFSQIPNPTS--YTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFK- 96
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
SC+ + G+Q+H + +LG S+ + ++ +++YS G ARKVFD+ ++ + SW
Sbjct: 97 SCRNSSE--GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSW 154
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
+I +Q + EA+ +F + K +P++VT+V+V +AC DL + ++H+Y+
Sbjct: 155 ATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYID 214
Query: 250 QVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
+ + ++LN+ L+D+Y KCG + LA +F + + N+ SW MI G+ + E
Sbjct: 215 EHGFGRH---VVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEE 271
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
AL F M+ GI+ + VT +L AC H G ++ GK +K +I+ A +V
Sbjct: 272 ALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKK-QRIDVDVALGTALV 330
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
D+ + G +E A + MP K +V+ W L+
Sbjct: 331 DMYAKCGSIETAIQVFHEMPEK-DVMTWTALI 361
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 155/360 (43%), Gaps = 52/360 (14%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYS--KAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+H+ +R GL + F S ++ S ++G + AR VF + P + N+II G +
Sbjct: 5 KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+EA+ + + G PD T S+ +C + + Q+H + K SD
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCH--STKLGFASD 119
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T N+L++MY CG + A KVF +++ V SW +MI +A NEA+ F M +
Sbjct: 120 TYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMK 179
Query: 319 S-GIRPNHVTFVGVLSACV-----------------HG------------------GKVQ 342
S ++PN VT V VL+AC HG G VQ
Sbjct: 180 SENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQ 239
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCL 399
+ F+ + E + M++ EEA + M +K + V L
Sbjct: 240 LARDLFDKAQ-----EKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAY-VVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ AC G +++G+W+ ++++ D A L ++YA G E ++ M +++
Sbjct: 295 LLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDV 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 133/313 (42%), Gaps = 39/313 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I + ++AL ++ M G+ D T+ +L A L ALE+G+ LH+
Sbjct: 254 FSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAY 313
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ ++ + + + +Y+K G E A +VF E PE+ + +W A+I GL+ G+A+ A
Sbjct: 314 IKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENA 373
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ F + G +PD +T V V +AC G ++ + NS+
Sbjct: 374 LQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGIS-----------------HFNSMS 416
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D YG QP + + ++ G EA + M + P+
Sbjct: 417 DTYGI---------------QPTIEHYGGLVDILGRAGRIAEAEELIKSM---PMAPDQF 458
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA-HYGCMVDLLGRAGLLEEARAMVE 385
G+L AC G ++ + K + +I+P + Y + ++ + EEA+ E
Sbjct: 459 VLGGLLGACRIHGNLEAAE---RAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRE 515
Query: 386 GMPMKANVVIWGC 398
M + GC
Sbjct: 516 LMAERGMRKPPGC 528
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 2/375 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W ++ YT+ + + AL+++ M+ GV D + IVLK C L ++GRQ+HS
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHS 313
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+LG ES + + Y K GD E A + F E SW+A+I+G SQ GR ++
Sbjct: 314 HIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
I +F L+ G + SV AC + +L + Q H +K S +++
Sbjct: 374 CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDA--IKRGLVSYLYGESAM 431
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCGR+D A + F ID+P+ +WT++I GYA +G A EAL F M+ G+RPN
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNA 491
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+ VL+AC H G V E K + M Y ++P HY CM+D RAGLL+EA ++
Sbjct: 492 VTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELIN 551
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + + + W L+G C ++K+G+ A++L L+P Y++L N+Y++ G WEE
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEE 611
Query: 446 VERIRAVMKHRNLAK 460
+R +M R L K
Sbjct: 612 AGHVRKLMAERELKK 626
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 162/352 (46%), Gaps = 19/352 (5%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C + + + +++ ++ +++ W +I Y + +KA+ ++ M +G+ P+
Sbjct: 135 CGSCIDVQKVFDEMLMKNLVS-------WVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
+L++ LE+G+Q+HS +R L +N E+ ++Y + G E A+ VFD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ +W ++ G +Q + + A+++F + G E D+ V C L D ++
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
Q+H ++ VK +S+ + L+D Y KCG ++ AY+ F I +PN SW+++I G+
Sbjct: 308 GRQIHSHI--VKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+ +G + + F +R G+ N + V AC + G + I+
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ-----AHGDAIKRG 420
Query: 361 FAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
Y MV + + G L+ AR E + + + V W ++ GN
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 2/233 (0%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+A D M A V ++ + +A +L +L GR +H R + E+
Sbjct: 69 KEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCL 128
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y G +KVFDE + L SW +I+ +++G ++AI +F ++ G P+
Sbjct: 129 LRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+S+ +C LEL Q+H +V ++++ ++ + ++ +MY +CG ++ A VF
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQIHSHV--IRAQLNANITVETAICNMYVRCGWLEGAKLVF 246
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+D N +WT ++VGY AL+ F M G+ + F VL C
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVC 299
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 213/377 (56%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + P AL ++ M R G P+ +TL V+KA+ G QLH V
Sbjct: 120 WTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +SN S + LY++ G + A+ VFD R SWNA+IAG ++ ++A++
Sbjct: 180 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALE 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + GF P + S+ AC S G LE VH Y+ +KS +K N+L+DM
Sbjct: 240 LFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM--IKSGEKLVAFAGNTLLDM 297
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F + + +V SW S++ YA +G NEA+ F MR GIRPN ++F
Sbjct: 298 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISF 357
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG H++E+MK + + HY +VDLLGRAG L A +E MP
Sbjct: 358 LSVLTACSHSGLLDEGWHYYELMKKDGIVLEAW-HYVTIVDLLGRAGDLNRALRFIEEMP 416
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IW L+ AC N ++G + A+H+ EL+P G +V+L NIYAS G W + R
Sbjct: 417 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 476
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + K PA S
Sbjct: 477 VRKKMKESGVKKEPACS 493
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 145/285 (50%), Gaps = 7/285 (2%)
Query: 127 VLKASCQLFAL-EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
L C +F L GR +H ++ + + +++Y+K G E+ARKVFD+ PER
Sbjct: 56 TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+W +I+G SQ R +A+ +F + + GF P++ T+ SV A + Q+H
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
F VK S+ + ++L+D+Y + G MD A VF ++ N SW ++I G+A
Sbjct: 176 G--FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCG 233
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+AL+ F M G RP+H ++ + AC G +++GK M + FA
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-N 292
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK--FGN 408
++D+ ++G + +AR + + + K +VV W L+ A + FGN
Sbjct: 293 TLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGN 336
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 214/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+++ ++AL + M V D + L L A L A + GR +HS V
Sbjct: 175 WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV 234
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
+LG ES+ F + +YSKAGD E A VF + E R + S+ +I G + + ++ +
Sbjct: 235 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 294
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ L++ G EP++ T S+ AC + LE Q+H V ++ + D + + L+D
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE--DPFVSSILVD 352
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MYGKCG ++ A + F EI P +W S++ + +GL +A+ F M + G++PN +T
Sbjct: 353 MYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAIT 412
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +L+ C H G V+EG +F M Y + P HY C++DLLGRAG L+EA+ + M
Sbjct: 413 FISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + N W +GAC G+ +MG+ A+ L +LEP + GA V+LSNIYA+ WE+V
Sbjct: 473 PFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVR 532
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R M+ N+ K+P YS
Sbjct: 533 SVRMRMRDGNVKKLPGYS 550
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 189/414 (45%), Gaps = 40/414 (9%)
Query: 14 RMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAH 73
R K H LL +C +T +FL H + SKC L +++
Sbjct: 23 RGKQLHALL--ICAGYT---------PCTFLTNH------LVNMYSKCGELDHALKLFDT 65
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
+ + +++ W +I ++ +A+ + M G +P + ++A
Sbjct: 66 MPQRNLVS-------WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L ++E+G+Q+H LA++ G+ S F S +YSK G A KVF+E P + SW A+
Sbjct: 119 LGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I G S+ G +EA+ F + D + S ACG+L + VH V VK
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSV--VKL 236
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALD 311
+SD + N+L DMY K G M+ A VF ID NV S+T +I GY + L
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLS 295
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDL 370
F +R GI PN TF ++ AC + +++G ++MK + +P + +VD+
Sbjct: 296 VFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDM 353
Query: 371 LGRAGLLEEA-RAMVE-GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
G+ GLLE A +A E G P + + W L+ FG +G+ K + +
Sbjct: 354 YGKCGLLEHAIQAFDEIGDPTE---IAWNSLVSV---FGQHGLGKDAIKFFERM 401
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 169/353 (47%), Gaps = 10/353 (2%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+L D L V++ + L G+QLH+L + G F + +++YSK G+ + A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+FD P+R L SW A+I+GLSQ+ + EAI F G++ CG P S AC SLG
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+E+ Q+H +K S+ + ++L DMY KCG M A KVF E+ + SWT+M
Sbjct: 121 SIEMGKQMH--CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAM 178
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY+ G EAL F M + + + L AC G ++ K + +V +
Sbjct: 179 IDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC---GALKACKFGRSVHSSVVK 235
Query: 357 I--EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ E + D+ +AG +E A + NVV + CL+ + ++ G
Sbjct: 236 LGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLS 295
Query: 415 VAKHL--QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V L Q +EP ++ + L A++ E+ ++ A + N + P S
Sbjct: 296 VFVELRRQGIEP-NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 347
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 208/348 (59%), Gaps = 4/348 (1%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PB TL VL +L LE+G ++ L L SN + + +Y K G + R V
Sbjct: 4 PBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 63
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FD R + W+A+IAG +Q+GR+ EA+++F +K +P+DVT+VSV SAC LG +
Sbjct: 64 FDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSV 123
Query: 239 ELALQVHKYVFQVKSKQK-SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
E ++ YV +S+ S+ + ++L+ MY KCG + A ++F ++ Q + +W SMI
Sbjct: 124 ETGERIGSYV---ESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMI 180
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NG A +A+ ++ M+E ++PN++TFVG+L+AC H G V+ G FF M++ + I
Sbjct: 181 MGLAINGFAEDAIALYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNI 240
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P H+ C+VDL R+G L +A + M ++ NVVIWG L+ A NV++ E K
Sbjct: 241 SPNIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGK 300
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L ELEP + G YV+LSNIYAS W+E ++R +MK + + K AYS
Sbjct: 301 KLLELEPDNSGNYVILSNIYASASRWQEALKVRKLMKDKRVQKAAAYS 348
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
EPB++T+ +V S C LGDLE+ L++ K S+ ++ ++++MY KCG +D
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKK--LXDNKNLGSNMIVSTAMLEMYVKCGAVDDG 60
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
VF + + +V W++MI GYA NG +NEAL+ F M+ + I+PN VT V VLSAC
Sbjct: 61 RLVFDHMARRDVVXWSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQL 120
Query: 339 GKVQEGKHFFE------MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
G V+ G+ ++ NVY Y + G + +AR + + +P + N
Sbjct: 121 GSVETGERIGSYVESRGLISNVYVASALLGMY-------SKCGNIIKARQIFDKLPQRDN 173
Query: 393 VVIWGCLMG 401
V +MG
Sbjct: 174 VTWNSMIMG 182
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 119/210 (56%), Gaps = 2/210 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y + +AL+++ M A + P+ TL VL A QL ++E G ++ S
Sbjct: 75 WSAMIAGYAQNGRSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVE 134
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL SN + S + +YSK G+ KAR++FD+ P+R +WN++I GL+ +G A++AI
Sbjct: 135 SRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIA 194
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ +K+ +P+++T V + +AC G +EL L+ + + + + ++D+
Sbjct: 195 LYNRMKEIEVKPNNITFVGLLTACTHAGHVELGLEFFRSM-RSDHNISPNIEHFACIVDL 253
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ + GR+ AY+ ++ +PNV W +++
Sbjct: 254 FCRSGRLIDAYEFICRMEVEPNVVIWGTLL 283
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y++ +AL +++ M + G+ + TL +LK++ L + + RQ+H L+V
Sbjct: 401 WNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSV 460
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S+ + + I Y K E A ++F+E L S+ ++I +Q G+ +EA+
Sbjct: 461 KSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALK 520
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ +PD S+ +AC +L E Q+H ++ +K D NSL++M
Sbjct: 521 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI--LKYGFVLDIFAGNSLVNM 578
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A + F E+ + + SW++MI G A +G +AL F+ M + G+ PNH+T
Sbjct: 579 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 638
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL AC H G V E K +FE M+ ++ +P HY CM+DLLGRAG + EA +V MP
Sbjct: 639 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 698
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+AN +WG L+GA +V++G A+ L LEP G +V+L+NIYAS G WE V
Sbjct: 699 FEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAE 758
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ + K P S
Sbjct: 759 VRRLMRDSKVKKEPGMS 775
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 173/350 (49%), Gaps = 27/350 (7%)
Query: 76 RTHMLHSY--SAAFHW-----NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
R ++H Y + W N ++ +Y ++ A+ ++ + + PD + V+
Sbjct: 276 RGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQ----PDIVSWNAVI 331
Query: 129 KASCQLF-----ALEI----GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
A C L ALE+ RQLHS +++ +ES+ F G + +YSK E AR F
Sbjct: 332 -AGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 390
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+ PE+ L +WNAII+G SQ EA+ +F+ + K G + T+ ++ + L +
Sbjct: 391 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 450
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
+ QVH VKS SD ++NSLID YGKC ++ A ++F E ++ S+TSMI
Sbjct: 451 VCRQVHG--LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITA 508
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
YA G EAL F M++ ++P+ +L+AC + ++GK + +
Sbjct: 509 YAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLD 568
Query: 360 RFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEKFGN 408
FA +V++ + G +++A RA E + +V W ++G + G+
Sbjct: 569 IFAG-NSLVNMYAKCGSIDDAGRAFSE--LTERGIVSWSAMIGGLAQHGH 615
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 152/314 (48%), Gaps = 8/314 (2%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+I+ + + I + + P + +L C +L G Q+H+ + G
Sbjct: 27 LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L + + I+LYSK F ARK+ DE+ E L SW+A+I+G +Q+G A+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ G + ++ T SV AC + DL + QVH V V S + D + N+L+ MY K
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV--VVSGFEGDVFVANTLVVMYAK 204
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
C + ++F EI + NV SW ++ Y EA+ F+ M SGI+PN + +
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 332 LSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
++AC GK H + ++K Y +P A+ +VD+ + G L +A ++ E +
Sbjct: 265 VNACTGLRDSSRGKIIHGY-LIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK- 320
Query: 390 KANVVIWGCLMGAC 403
+ ++V W ++ C
Sbjct: 321 QPDIVSWNAVIAGC 334
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 62/380 (16%)
Query: 58 LSKCTNLLQLN---QIYAHI----------IRTHMLHSYSAA------------------ 86
LS+C L QI+AHI IR H+++ YS
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDL 122
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W+ +I Y + AL + M GV + +T VLKA + L IG+Q+H +
Sbjct: 123 VSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGV 182
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V G E + F + + +Y+K +F ++++FDE PER + SWNA+ + Q EA
Sbjct: 183 VVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEA 242
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + G +P++ ++ S+ +AC L D +H Y+ +K D N+L+
Sbjct: 243 VGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL--IKLGYDWDPFSANALV 300
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY K G + A VF +I QP++ SW ++I G + +AL+ M+ R H
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK----RQLHS 356
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ + + +M ++ F G +VD+ + LLE+AR
Sbjct: 357 SLMKM-----------------DMESDL------FVSVG-LVDMYSKCDLLEDARMAFNL 392
Query: 387 MPMKANVVIWGCLMGACEKF 406
+P K +++ W ++ ++
Sbjct: 393 LPEK-DLIAWNAIISGYSQY 411
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 184/455 (40%), Gaps = 86/455 (18%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + +KC L +++ I +++ WN + Y + + +A+ ++
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVS-------WNALFSCYVQXDFCGEAVGLFY 247
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M +G+ P+ ++L ++ A L G+ +H ++LG + + F + + +Y+K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
D A VF++ + + SWNA+IAG ++A+++ +K+
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR--------------- 352
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
Q+H + +K +SD + L+DMY KC ++ A F + + ++
Sbjct: 353 ------------QLHSSL--MKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 398
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGG 339
+W ++I GY+ EAL F M + GI N T +L + VHG
Sbjct: 399 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 458
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYG------------------------CMVDLLGRAG 375
V+ G H ++Y + YG M+ + G
Sbjct: 459 SVKSGFH-----SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYG 513
Query: 376 LLEEARAM---VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE----LEPWSDG 428
EEA + ++ M +K + + L+ AC + G+ + H+ + L+ ++
Sbjct: 514 QGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN 573
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ V N+YA G ++ R + + R + A
Sbjct: 574 SLV---NMYAKCGSIDDAGRAFSELTERGIVSWSA 605
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 240/480 (50%), Gaps = 46/480 (9%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL----SKCTNLLQLNQIYAHIIR 76
LL + K F + I +S L +DP + T L + C ++ A ++
Sbjct: 127 LLKAVSKVSAFNHGLEIHGLASKLGFVDDP--FIQTGLIAMYASCRRIMD-----ARLLF 179
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA 136
M H + A WN II Y + AL ++ M + + PD L VL A
Sbjct: 180 DKMCHPDAVA--WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGN 237
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV------------------ 178
L GR +H G + ++ I++Y+ G + ARK+
Sbjct: 238 LSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSG 297
Query: 179 -------------FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
FD+ ER L W+A+I+G ++ + +EA+ +F + + PD +TM
Sbjct: 298 YAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITM 357
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+SV SAC +G L A +H YV +S + N+LIDMY KCG + A +VF +
Sbjct: 358 LSVISACSHVGALAQANWIHTYV--DRSGFGRALSVNNALIDMYAKCGNLVKAREVFENM 415
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ NV SW+SMI +A +G A+ A+ F M+E I PN VTF+GVL AC H G V+EG+
Sbjct: 416 PRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE 475
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F M N + I P HYGCMVDL RA L +A ++E MP NV+IWG LM AC+
Sbjct: 476 KLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQV 535
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G ++GE+ AK L ELEP DGA VVLSNIYA W +V IR M ++ ++K A S
Sbjct: 536 HGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASS 595
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 186/398 (46%), Gaps = 39/398 (9%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N ++R +R P+K + +Y + D ++ P +LKA ++ A G ++H LA
Sbjct: 89 NQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLAS 148
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG + F ++G I++Y+ AR +FD+ +WN II G Q+G +A+
Sbjct: 149 KLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD V + +V SACG G+L +H++V + D+ + +LI+M
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFV--KDNGYAIDSHLQTALINM 266
Query: 269 YGKCGRMDLAYK-------------------------------VFWEIDQPNVSSWTSMI 297
Y CG MDLA K +F ++ + ++ W++MI
Sbjct: 267 YANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMI 326
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GYA + EAL F M + P+ +T + V+SAC H G + + ++ +
Sbjct: 327 SGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGF 385
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+ ++D+ + G L +AR + E MP K NV+ W ++ A GN + +
Sbjct: 386 GRALSVNNALIDMYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGNADSAIKLFR 444
Query: 418 HLQELEPWSDGAYVVLSNIYAS--RGLWEEVERIRAVM 453
++E+ +G + +YA GL EE E++ + M
Sbjct: 445 RMKEVNIEPNGV-TFIGVLYACGHAGLVEEGEKLFSSM 481
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 206/377 (54%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ +AL + M R G PD +TL VL + + G +LH A
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G + F S I +Y+ + + KVFD P R WN+++AG +Q+G EA+
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +P VT S+ ACG+L L L Q+H YV ++ + + +SLIDM
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV--IRGGFDGNVFISSSLIDM 318
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + +A ++F I P++ SWT+MI+G+A +G A EAL F M ++PNH+TF
Sbjct: 319 YCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITF 378
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G V +G +F M + Y I P H+ + D LGR G LEEA + GM
Sbjct: 379 LAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK 438
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +W L+ AC+ N + E VAK + +LEP S G++++LSN Y+S G W E
Sbjct: 439 IKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAH 498
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ + + K PA S
Sbjct: 499 LRKSMRKKGMQKEPACS 515
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 30/334 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC----YTLPIVLKASCQLFALEIGRQLH 144
W + IR+ A+ +++ M + C +LP LK+ L +G LH
Sbjct: 22 WAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASLH 81
Query: 145 SLAVRLGLESNEFCESGFISLYSK--------------AGDFEKARKVFDENPERKLGSW 190
+LA+R G ++ F + ++LY K A E RKVFDE PE+ + SW
Sbjct: 82 ALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSW 141
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
N ++ G ++ GR EA+ + + + G +PD T+ SV D+ +++H F
Sbjct: 142 NTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG--FA 199
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++ D + +SLIDMY C R D + KVF + + W SM+ G A NG +EAL
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH----YGC 366
F M SGI+P VTF ++ AC + + GK + Y I F
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQL-----HAYVIRGGFDGNVFISSS 314
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + G + AR + + + ++V W ++
Sbjct: 315 LIDMYCKCGNVSIARRIFDRI-QSPDIVSWTAMI 347
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 108/216 (50%), Gaps = 8/216 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN+++ + + +AL ++ M +G+ P T ++ A L +L +G+QLH+
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R G + N F S I +Y K G+ AR++FD + SW A+I G + G A+E
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN-- 263
A+ +F ++ +P+ +T ++V +AC G L + KY F S L
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAG---LVDKGWKY-FNSMSDHYGIVPSLEHH 414
Query: 264 -SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+L D G+ G+++ AY + +P S W++++
Sbjct: 415 AALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 221/412 (53%), Gaps = 34/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y+R P A+ + M GV PD + L A +L LE GR LH L
Sbjct: 203 WTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVG 262
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD-----ENPE------------------- 184
+ ++ + I +Y+K GD +A+ VFD + PE
Sbjct: 263 KKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIAR 322
Query: 185 --------RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
R + ++N++I G GR ++A+ +F+ L++ G D+ T+VS+ +AC SLG
Sbjct: 323 SLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLG 382
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L +H + Q ++ D ++ +L+DMY KCGR+D A VF + + +V +W++M
Sbjct: 383 ALPQGRALHASIEQRIVEE--DVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAM 440
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A NG+ +AL+ F M+ G +P VT++ VL+AC H + EG+ F M+++++
Sbjct: 441 IAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHK 500
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ P+ HYGCM+DLL R+GLL+EA +V+ MPM+ N VIW ++ AC N+ + A
Sbjct: 501 LHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAA 560
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLAT 468
+HL +L P D YV L NIY W E +RIR +M+ + + K YS T
Sbjct: 561 EHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSIT 612
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 132/282 (46%), Gaps = 44/282 (15%)
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G ++AR++ + PER + SW ++IAG S+ GR +A+ F + G EPD+V ++
Sbjct: 183 GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGAL 242
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC----------------- 272
SAC L +LE +H V + K Q +D L++ +LIDMY KC
Sbjct: 243 SACSKLKNLEFGRLLHLLVGK-KRIQMTDKLVV-TLIDMYAKCGDIAQAQAVFDAVGRGQ 300
Query: 273 ---------------GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
G +D+A +F ++ +V ++ SMI GY +G +AL F +R
Sbjct: 301 KPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLR 360
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G+R ++ T V +L+AC G + +G+ ++ +E +VD+ + G +
Sbjct: 361 RHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRI-VEEDVYLVTALVDMYMKCGRV 419
Query: 378 EEARAMVEGM---------PMKANVVIWGCLMGACEKFGNVK 410
+EA A+ M M A + G M A E F +K
Sbjct: 420 DEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMK 461
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D ++ ++I + G +D A ++ + + NV SWTS+I GY+ G +A+ CF+ M
Sbjct: 168 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 227
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G+ P+ V +G LSAC ++ G+ ++ +I+ ++D+ + G +
Sbjct: 228 SDGVEPDEVAVIGALSACSKLKNLEFGR-LLHLLVGKKRIQMTDKLVVTLIDMYAKCGDI 286
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+A+A+ + + W ++ K G+V +
Sbjct: 287 AQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIAR 322
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II Y++ +AL +++ M + G+ + TL +LK++ L + + RQ+H L+V
Sbjct: 428 WNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSV 487
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S+ + + I Y K E A ++F+E L S+ ++I +Q G+ +EA+
Sbjct: 488 KSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALK 547
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ ++ +PD S+ +AC +L E Q+H ++ +K D NSL++M
Sbjct: 548 LFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHI--LKYGFVLDIFAGNSLVNM 605
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A + F E+ + + SW++MI G A +G +AL F+ M + G+ PNH+T
Sbjct: 606 YAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITL 665
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VL AC H G V E K +FE M+ ++ +P HY CM+DLLGRAG + EA +V MP
Sbjct: 666 VSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMP 725
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+AN +WG L+GA +V++G A+ L LEP G +V+L+NIYAS G WE V
Sbjct: 726 FEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAE 785
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ + K P S
Sbjct: 786 VRRLMRDSKVKKEPGMS 802
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 169/321 (52%), Gaps = 6/321 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I E ++AL++ M R+G+ P+ +TL LKA + E+GRQLHS +
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ +ES+ F G + +YSK E AR F+ PE+ L +WNAII+G SQ EA+
Sbjct: 387 KMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALS 446
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + K G + T+ ++ + L + + QVH VKS SD ++NSLID
Sbjct: 447 LFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG--LSVKSGFHSDIYVVNSLIDS 504
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC ++ A ++F E ++ S+TSMI YA G EAL F M++ ++P+
Sbjct: 505 YGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVC 564
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGM 387
+L+AC + ++GK + + FA +V++ + G +++A RA E
Sbjct: 565 SSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG-NSLVNMYAKCGSIDDAGRAFSE-- 621
Query: 388 PMKANVVIWGCLMGACEKFGN 408
+ +V W ++G + G+
Sbjct: 622 LTERGIVSWSAMIGGLAQHGH 642
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 181/388 (46%), Gaps = 13/388 (3%)
Query: 21 LLHRLCKTHTFRKHVTISAASSFLDTHEDPA--KIVATQLSKCTNLLQLNQIYAHIIRTH 78
LL + C T + R + I A + +DP+ + SKC N ++
Sbjct: 62 LLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD 121
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
++ W+ +I Y + AL + M GV + +T VLKA + L
Sbjct: 122 LVS-------WSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR 174
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
IG+Q+H + V G E + F + + +Y+K +F ++++FDE PER + SWNA+ +
Sbjct: 175 IGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYV 234
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q EA+ +F + G +P++ ++ S+ +AC L D +H Y+ +K D
Sbjct: 235 QIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYL--IKLGYDWD 292
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
N+L+DMY K G + A VF +I QP++ SW ++I G + +AL+ M+
Sbjct: 293 PFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR 352
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
SGI PN T L AC G + G+ + + F G +VD+ + LLE
Sbjct: 353 SGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG-LVDMYSKCDLLE 411
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKF 406
+AR +P K +++ W ++ ++
Sbjct: 412 DARMAFNLLPEK-DLIAWNAIISGYSQY 438
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 153/314 (48%), Gaps = 8/314 (2%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
+I+ + + I + + P + +L C +L G Q+H+ + G
Sbjct: 27 LIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L + + I+LYSK +F ARK+ DE+ E L SW+A+I+G +Q+G A+ F
Sbjct: 87 LSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ G + ++ T SV AC + DL + QVH V V S + D + N+L+ MY K
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVV--VVSGFEGDVFVANTLVVMYAK 204
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
C + ++F EI + NV SW ++ Y EA+ F+ M SGI+PN + +
Sbjct: 205 CDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSM 264
Query: 332 LSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
++AC GK H + ++K Y +P A+ +VD+ + G L +A ++ E +
Sbjct: 265 VNACTGLRDSSRGKIIHGY-LIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK- 320
Query: 390 KANVVIWGCLMGAC 403
+ ++V W ++ C
Sbjct: 321 QPDIVSWNAVIAGC 334
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/450 (22%), Positives = 196/450 (43%), Gaps = 59/450 (13%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A + +KC L +++ I +++ WN + Y +++ +A+ ++
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVS-------WNALFSCYVQIDFCGEAVGLFY 247
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M +G+ P+ ++L ++ A L G+ +H ++LG + + F + + +Y+K G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVG 307
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
D A VF++ + + SWNA+IAG ++A+++ +K+ G P+ T+ S
Sbjct: 308 DLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALK 367
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC +G EL Q+H + +K +SD + L+DMY KC ++ A F + + ++
Sbjct: 368 ACAGMGLKELGRQLHSSL--MKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 425
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGG 339
+W ++I GY+ EAL F M + GI N T +L + VHG
Sbjct: 426 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 485
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYG------------------------CMVDLLGRAG 375
V+ G H ++Y + YG M+ + G
Sbjct: 486 SVKSGFH-----SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYG 540
Query: 376 LLEEARAM---VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQE----LEPWSDG 428
EEA + ++ M +K + + L+ AC + G+ + H+ + L+ ++
Sbjct: 541 QGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGN 600
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ V N+YA G ++ R + + R +
Sbjct: 601 SLV---NMYAKCGSIDDAGRAFSELTERGI 627
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 217/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + ++AL + M GV PD L A + A+ G Q+H+
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ++ + ++LY++ G E+A +F E + +WN +I+G Q K+A+
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALM 534
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + + T +S SA +L D++ QVH VK+ S+T + N+LI +
Sbjct: 535 VFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRA--VKTGHTSETEVANALISL 592
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ A +F E+ N SW ++I + +G EALD F M++ G++PN VTF
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V+EG +F+ M NVY + P HY C+VD+LGRAG L+ AR V+ MP
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ AN +IW L+ AC+ N+++GE AKHL ELEP +YV+LSN YA G W ++
Sbjct: 713 ITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQ 772
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK R + K P S
Sbjct: 773 VRKMMKDRGIRKEPGRS 789
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y ++ K+ +I+ M G+ P+ +T P +L+ +E+G Q+HSL++
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ + I +YSK G +KARK+ + +R + SW ++IAG Q +EA+
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ CG PD++ + S SAC + + LQ+H V+ S +D + N+L+++
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY--VSGYAADISIWNTLVNL 491
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR + A+ +F EI+ + +W +I G+ + L +AL F M ++G + N TF
Sbjct: 492 YARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTF 551
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +SA + +++GK +K + E A+ ++ L G+ G +E+A+ + M
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--ALISLYGKCGSIEDAKMIFSEM 609
Query: 388 PMKANVVIWGCLMGACEKFG 407
++ N V W ++ +C + G
Sbjct: 610 SLR-NEVSWNTIITSCSQHG 628
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 170/340 (50%), Gaps = 6/340 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + K+A +Y M V+P Y L VL A + GR +H+
Sbjct: 112 WVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S F + I+LY G F+ A +VF + ++N +I+G +Q G + A+
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD VT+ S+ +AC S+GDL+ Q+H Y+ +K+ D + SL+D+
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL--LKAGMSFDYITEGSLLDL 289
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A+ +F D+ NV W M+V Y ++ + F M+ +GI PN T+
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTY 349
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+L C G+++ G+ + +KN ++ + + G ++D+ + G L++AR ++E M
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--GVLIDMYSKYGCLDKARKILE-M 406
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
K +VV W ++ + + K +Q+ W D
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 11/325 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I + + + AL I+ M +G+ PDC T+ +L A + L+ G+QLHS +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G+ + E + LY K GD E A +F+ + WN ++ Q ++ +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G P+ T + C G +EL Q+H +K+ +SD + LIDM
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS--LSIKNGFESDMYVSGVLIDM 390
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +D A K+ +++ +V SWTSMI GY + EAL F M++ G+ P+++
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVY--QIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
SAC +++G ++ VY + + +V+L R G EEA ++
Sbjct: 451 ASAASACAGIKAMRQG---LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507
Query: 387 MPMKANVVIWGCLMGACEKFGNVKM 411
+ K + G + G FG ++
Sbjct: 508 IEHKDEITWNGLISG----FGQSRL 528
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 42/354 (11%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H+ +V GL ++ + I LY+K G +AR+VF E R SW A+++G +Q G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
KEA ++ + P + SV SAC +H V+ K S+T +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY--KQAFCSETFV 181
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+LI +Y G LA +VF ++ + ++ ++I G+A G AL F M+ SG+
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RP+ VT +L+AC G +Q+GK + + + G ++DL + G +E A
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 382 AMVEGMPMKANVVIWG-----------------------------------CLMGACEKF 406
+ + + NVV+W C++ C
Sbjct: 301 DIFN-LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCT 359
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKHRNL 458
G +++GE + L + YV VL ++Y+ G ++ +I +++ R++
Sbjct: 360 GQIELGEQI-HSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDV 412
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A+ + +NPE+ L +++A + RA + D+ L+ C G
Sbjct: 15 AKFIVPDNPEKIL----SLVAAKASHHRALGSADLTCALQACR---------------GR 55
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L L++H V +D L+ N LID+Y K G + A +VF E+ + SW
Sbjct: 56 GNRWPLVLEIH--ATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWV 113
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+M+ GYA +GL EA + M + + P VLSAC G +G+
Sbjct: 114 AMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I YT+ + +AL ++ M G+ D + A + AL G+Q+H+ +
Sbjct: 484 WTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY 543
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + +SLY++ G + A F++ + SWNA+I+G +Q G +EA+
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQ 603
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G E + T S SA + +++ Q+H +K+ S+T N LI +
Sbjct: 604 VFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIH--AMMIKTGYDSETEASNVLITL 661
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A + F+E+ + NV SW +MI GY+ +G +EA+ F M++ G+ PNHVTF
Sbjct: 662 YSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTF 721
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC H G V EG +F M + + P+ HY C+VDLLGRA LL AR +E MP
Sbjct: 722 VGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMP 781
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + +IW L+ AC N+++GE+ A+HL ELEP YV+LSN+YA G W+ +R
Sbjct: 782 IEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDR 841
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK R + K P S
Sbjct: 842 TRQMMKDRGVKKEPGRS 858
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 163/320 (50%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y +L ++ I++ M G++P+ YT P +L+ L AL++G Q+H+ +
Sbjct: 383 WNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVI 442
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + N + S I +Y+K G+ + AR + E + SW A+IAG +Q EA+
Sbjct: 443 KSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALK 502
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G D++ S SAC + L Q+H + S D + N+L+ +
Sbjct: 503 LFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSY--ISGYSEDLSIGNALVSL 560
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR AY F +ID + SW ++I G+A +G EAL F M ++G+ N TF
Sbjct: 561 YARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTF 620
Query: 329 VGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+SA + +++GK MM K Y E ++ ++ L + G +E+A+ M
Sbjct: 621 GSAVSATANTANIKQGKQIHAMMIKTGYDSETEASN--VLITLYSKCGSIEDAKREFFEM 678
Query: 388 PMKANVVIWGCLMGACEKFG 407
P K NVV W ++ + G
Sbjct: 679 PEK-NVVSWNAMITGYSQHG 697
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 166/317 (52%), Gaps = 10/317 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++ +A+ ++ M ++ V+P Y VL A ++ ++G QLH V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL S F + ++LYS+ G+ A ++F + R S+N++I+GL+Q G + A+
Sbjct: 241 KWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQ 300
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD VT+ S+ SAC S+G Q+H YV +K SD ++ SL+D+
Sbjct: 301 LFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYV--IKMGMSSDLIIEGSLLDL 358
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++ A++ F + NV W M+V Y G +E+ F M+ G+ PN T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVE 385
+L C G + G+ +++K+ +Q F Y C ++D+ + G L+ AR +++
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQ----FNVYVCSVLIDMYAKHGELDTARGILQ 474
Query: 386 GMPMKANVVIWGCLMGA 402
+ + +VV W ++
Sbjct: 475 RL-REEDVVSWTAMIAG 490
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 165/358 (46%), Gaps = 17/358 (4%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
+ T S+ NL+ QI++ + R + +N++I + +AL ++ M
Sbjct: 254 LVTLYSRWGNLIAAEQIFSKMHRRDRIS-------YNSLISGLAQRGFSDRALQLFEKMQ 306
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+ PDC T+ +L A + A G+QLHS +++G+ S+ E + LY K D E
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A + F + WN ++ Q G E+ +F+ ++ G P+ T S+ C
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
SLG L+L Q+H V +KS + + + + LIDMY K G +D A + + + +V SW
Sbjct: 427 SLGALDLGEQIHTQV--IKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+MI GY + L EAL F M GIR +++ F +SAC + +G+
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ-IHAQSY 543
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM------GACEK 405
+ + +V L R G ++A E + K N+ W L+ G CE+
Sbjct: 544 ISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNIS-WNALISGFAQSGHCEE 600
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 159/333 (47%), Gaps = 5/333 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIGRQLHSLA 147
WN +I + + L ++ M V PD T VL+A S ++ Q+H+
Sbjct: 79 WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G S+ + I LYSK G + A+ VF+ + SW A+I+GLSQ+GR EAI
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K P SV SAC + +L Q+H ++ VK S+T + N+L+
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFI--VKWGLSSETFVCNALVT 256
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y + G + A ++F ++ + + S+ S+I G A G ++ AL F M+ ++P+ VT
Sbjct: 257 LYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVT 316
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+LSAC G +GK + + + G ++DL + +E A
Sbjct: 317 VASLLSACASVGAGYKGKQLHSYVIKM-GMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+ NVV+W ++ A + GN+ W+ +Q
Sbjct: 376 ETE-NVVLWNVMLVAYGQLGNLSESYWIFLQMQ 407
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 36/330 (10%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
M G+ + T + + +L ++LH+ + G + + S I +Y G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ A K+FD+ P + WN +I+GL A + + +F + PD+ T SV A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 232 C-GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
C G ++ Q+H + + S L+ N LID+Y K G +DLA VF + +
Sbjct: 121 CSGGKAPFQVTEQIHAKI--IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDS 178
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGG 339
SW +MI G + NG +EA+ F M +S + P F VLSAC +HG
Sbjct: 179 VSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGF 238
Query: 340 KVQEGKH-----------FFEMMKNVYQIEPRFAH--------YGCMVDLLGRAGLLEEA 380
V+ G + N+ E F+ Y ++ L + G + A
Sbjct: 239 IVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRA 298
Query: 381 RAMVEGMP---MKANVVIWGCLMGACEKFG 407
+ E M MK + V L+ AC G
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVG 328
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 214/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y+++ ++AL + M V D + L L A L A + GR +HS V
Sbjct: 110 WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV 169
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
+LG ES+ F + +YSKAGD E A VF + E R + S+ +I G + + ++ +
Sbjct: 170 KLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGL 229
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ L++ G EP++ T S+ AC + LE Q+H V ++ + D + + L+D
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE--DPFVSSILVD 287
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MYGKCG ++ A + F EI P +W S++ + +GL +A+ F M + G++PN +T
Sbjct: 288 MYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAIT 347
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ +L+ C H G V+EG +F M Y + P HY C++DLLGRAG L+EA+ + M
Sbjct: 348 FISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 407
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + N W +GAC G+ +MG+ A+ L +LEP + GA V+LSNIYA+ WE+V
Sbjct: 408 PFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVR 467
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R M+ N+ K+P YS
Sbjct: 468 SVRMRMRDGNVKKLPGYS 485
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 146/295 (49%), Gaps = 8/295 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++ +A+ + M G +P + ++A L ++E+G+Q+H LA+
Sbjct: 9 WTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLAL 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G+ S F S +YSK G A KVF+E P + SW A+I G S+ G +EA+
Sbjct: 69 KFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALL 128
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + D + S ACG+L + VH V VK +SD + N+L DM
Sbjct: 129 AFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSV--VKLGFESDIFVGNALTDM 186
Query: 269 YGKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y K G M+ A VF ID NV S+T +I GY + L F +R GI PN
Sbjct: 187 YSKAGDMESASNVFG-IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 245
Query: 327 TFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
TF ++ AC + +++G ++MK + +P + +VD+ G+ GLLE+A
Sbjct: 246 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI--LVDMYGKCGLLEQA 298
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P+R L SW A+I+GLSQ+ + EAI F G++ CG P S AC SLG +E+
Sbjct: 2 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
Q+H +K S+ + ++L DMY KCG M A KVF E+ + SWT+MI GY+
Sbjct: 62 QMH--CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSK 119
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI--EPR 360
G EAL F M + + + L AC G ++ K + +V ++ E
Sbjct: 120 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC---GALKACKFGRSVHSSVVKLGFESD 176
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL- 419
+ D+ +AG +E A + NVV + CL+ + ++ G V L
Sbjct: 177 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236
Query: 420 -QELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
Q +EP ++ + L A++ E+ ++ A + N + P S
Sbjct: 237 RQGIEP-NEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVS 282
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 149/378 (39%), Positives = 212/378 (56%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I R +AL+ ++ M +GV D T+ VL A+ L + GR +H V
Sbjct: 172 WTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYV 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G + + + S + +YSK G + A KVF+E P R L SW A+IAG Q R KEA+
Sbjct: 232 ESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEAL 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G EP+ T+ S +AC LG L+ +H+YV +SK ++ + +L+D
Sbjct: 292 KVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYV--DRSKLGLNSKLGTALVD 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG +D A VF ++ +V WT+MI G A G A +L+ F M S ++PN VT
Sbjct: 350 MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+GVLSAC HGG V EG F +M Y++EP HYGCMVDLLGRAG LEEA +E M
Sbjct: 410 FLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ +WG L C ++GE + HL +L+P G Y++L+N+Y+ WE
Sbjct: 470 PMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R +MK + + K P S
Sbjct: 530 NVRRLMKGKGVDKSPGCS 547
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 169/323 (52%), Gaps = 6/323 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN IIR ++ P+ L Y + GV+PD +T P++LKA +L E Q ++
Sbjct: 70 FLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAH 128
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ GL+ + F ++ +S ++ G + +R++F E ++ + SW A+I G ++GRA EA
Sbjct: 129 IVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEA 188
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F+ ++ G E D+VT+VSV A L D+ VH + + + D + ++L+
Sbjct: 189 LECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVE-SGRVIWDVYVGSALV 247
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG D A KVF E+ N+ SW ++I GY EAL F M GI PN
Sbjct: 248 DMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQS 307
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T L+AC G + +G+ E + ++ + + +VD+ + G ++EA + E
Sbjct: 308 TVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFE 365
Query: 386 GMPMKANVVIWGCLMGACEKFGN 408
+P K +V W ++ G+
Sbjct: 366 KLPAK-DVYPWTAMINGLAMRGD 387
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 31/280 (11%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+Q S+ + GL + F S L S D +FD + WN II G S
Sbjct: 25 KQTTSILITSGLAHHTFFLSDI--LRSATKDLGYTLLLFDRLATPYIFLWNTIIRGFSAS 82
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ + + + L+ G PD T + A L + E Q + ++ VK D
Sbjct: 83 SQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN-ENPFQFYAHI--VKFGLDFDAF 139
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ NSL+ + CG +D + ++F E + +V SWT++I G NG A EAL+CF MR SG
Sbjct: 140 VQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSG 199
Query: 321 IRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD 369
+ + VT V VL A VHG V+ G+ +++ +VD
Sbjct: 200 VEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVG-----------SALVD 248
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA---CEKF 406
+ + G ++A + MP + N+V WG L+ C ++
Sbjct: 249 MYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRY 287
>gi|125546238|gb|EAY92377.1| hypothetical protein OsI_14107 [Oryza sativa Indica Group]
Length = 602
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 222/389 (57%), Gaps = 12/389 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDI-----YIFMSRAGVLPDCYTLPIVLKASCQL-FALEI 139
AF N +IR + +P +L + + M R V+P+ +T P +LKA L + ++
Sbjct: 88 AFLANTLIRAHA--TSPIHSLRLRAAAFFPLMLRGAVVPNKFTFPFLLKACAALPGSPDV 145
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYS--KAGDFEKARKVFDENPERKLGSWNAIIAGL 197
G Q H+ A++ G ++++ + I +YS G AR VFD P+ +W+A+I G
Sbjct: 146 GLQAHAAALKFGFATDQYVSNTLIHMYSCFGGGFLGDARNVFDRMPKESAVTWSAMIGGY 205
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ G + +A+++F ++ G + D+VT++ V +A LG LELA V ++V + + KS
Sbjct: 206 VRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVRRFV-EREGIGKS 264
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
TL N+LID KCG +D A VF + Q +V SWTS+I A G EA+ F M+
Sbjct: 265 VTL-CNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGKEAVRVFEEMK 323
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+G+ P+ V F+GVL+AC H G V EG +F+ MK Y IEP+ HYGCMVD+ GRAG++
Sbjct: 324 VAGVPPDDVAFIGVLTACSHAGMVDEGCGYFDAMKVEYGIEPKIEHYGCMVDMFGRAGMV 383
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
E A V MP++ N VIW L+ AC G +++GE + + L P + Y++LSN++
Sbjct: 384 ERAMEFVRTMPIQPNPVIWRSLVSACRAHGRLELGESITRSLLHEYPAHEANYIMLSNVF 443
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A W+E IR M R + K+P S+
Sbjct: 444 ALTQRWKEKSEIRREMSKRGIKKVPGCSI 472
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+A W+ +I Y R A++++ M GV D T+ VL A+ L ALE+ R +
Sbjct: 194 SAVTWSAMIGGYVRGGLSSDAVELFREMQANGVQADEVTVIGVLAAATDLGALELARWVR 253
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
R G+ + + I +K GD + A VF+ +R + SW ++I L+ +GR K
Sbjct: 254 RFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMQQRSVVSWTSVIDALAMEGRGK 313
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F +K G PDDV + V +AC G
Sbjct: 314 EAVRVFEEMKVAGVPPDDVAFIGVLTACSHAG---------------------------- 345
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
++D CG D A KV + I +P + + M+ + G+ A++ ++R I+PN
Sbjct: 346 MVDE--GCGYFD-AMKVEYGI-EPKIEHYGCMVDMFGRAGMVERAME---FVRTMPIQPN 398
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
V + ++SAC G+++ G+ + + Y
Sbjct: 399 PVIWRSLVSACRAHGRLELGESITRSLLHEY 429
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 207/377 (54%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + E + L ++ M G LPD +TL VL+ L A G+Q+H+ +
Sbjct: 57 WNAMVSGLIQFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVL 116
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E N S +Y K+G + KV R + +WN +IAG +Q+G + +D
Sbjct: 117 KYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLD 176
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ +K G PD +T+VSV S+ L L Q+H +K+ S +L+SLI M
Sbjct: 177 LYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEA--IKAGANSAVAVLSSLISM 234
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ + K + + P+ W+SMI Y +G EA+ F M + G+ N VTF
Sbjct: 235 YSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTF 294
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC H G ++G FF++M Y ++PR HY C+VDLLGR+G L+EA AM+ MP
Sbjct: 295 LSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMP 354
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++A+VVIW L+ AC N M A+ + L P YV+LSNI+AS W++V +
Sbjct: 355 LEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSK 414
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ RN+ K P S
Sbjct: 415 VRTTMRDRNVKKEPGVS 431
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ + + GD + A KVFDE ER + +WNA+++GL Q + + +F + + GF PD
Sbjct: 29 LINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFLPD 88
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+ T+ SV C L QVH YV +K + + ++ +SL MY K G + KV
Sbjct: 89 EFTLGSVLRGCAGLRASYAGKQVHAYV--LKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
+ NV +W ++I G A NG LD ++ M+ SG+RP+ +T V V+S+ +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206
Query: 342 QEGKHF 347
+G+
Sbjct: 207 FQGQQI 212
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 2/148 (1%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N LI+ + + G +D A KVF E+ + NV++W +M+ G L F M E G
Sbjct: 27 NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ T VL C GK + Y E + + ++G L E
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLK-YGYEFNLVVGSSLAHMYMKSGSLGEGEK 145
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVK 410
+++ M ++ NVV W L+ + G+ +
Sbjct: 146 VIKAMRIR-NVVAWNTLIAGNAQNGHFE 172
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 221/403 (54%), Gaps = 33/403 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + ++A ++ M R G+L D +TL +L A LE G+ +HS +
Sbjct: 179 WNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLL 238
Query: 149 RLGLESNEFCESGFISLYSKAGDF-------------------------------EKARK 177
G + + + +Y K GD + AR
Sbjct: 239 VRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARD 298
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
F++ PE+ + SWNA+I+ Q GR EA+D++ +K G PD+ T+ +V SACG LGD
Sbjct: 299 WFEQIPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGD 358
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L +H + + + NSL+DMY +CG++D A +F E+ NV SW ++I
Sbjct: 359 LASGKMIHDCI--RDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAII 416
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +G A +AL F M P+ +TFV +LSAC HGG ++ G+++F+ M++VY +
Sbjct: 417 GALAMHGRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNV 476
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+P HY CMVDLLGR G L +A +++ MPM+ +VV+WG L+GAC G++++G+ V K
Sbjct: 477 KPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIK 536
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
L ELE S G +V++SN+ WE+++R+R +M+ + K
Sbjct: 537 QLLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKK 579
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 206/419 (49%), Gaps = 63/419 (15%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHII-------RTHMLHSYSA------------------ 85
A+ V L +C ++ +LNQ++AH++ + +L SY A
Sbjct: 12 ARHVRELLRRCGSVHRLNQLHAHLVVHGVDDVTSQILASYCALPAGGGVWYARQLFDRIP 71
Query: 86 ---AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
F +N++IR Y P++AL + M R G+LP+ +TLP +LKA ++ A E
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMV 131
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
H + V+LG F + + Y+ AG +R+ FDE +R + SWN++I G +Q G
Sbjct: 132 THGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGN 191
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+EA +F G+++ G D+ T+VS+ AC + G+LE VH ++ + + D ++
Sbjct: 192 TREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHL--LVRGCRIDLILA 249
Query: 263 NSLIDMYGKCGRMDLAYKVF-----------------------------W--EIDQPNVS 291
N+L+DMYGKCG + +A+ F W +I + ++
Sbjct: 250 NALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSII 309
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW +MI Y G +EALD ++ M+ G+ P+ T VLSAC G + GK + +
Sbjct: 310 SWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCI 369
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++ + P A + ++D+ R G ++ A ++ MP K NV+ W ++GA G +
Sbjct: 370 RDNFH-NPGVALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 224/417 (53%), Gaps = 42/417 (10%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLP--------DCYTLPIVLKASCQLFALEIGR 141
N +I+ Y + + A+++Y+ M R P D +T P +LKA L A +GR
Sbjct: 77 NAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASRLGR 136
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII---AGLS 198
Q+H+ R G ES+ ++ I +Y++ GD ARK FD E+ + SWN +I A +
Sbjct: 137 QVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARMG 196
Query: 199 QDGRAKE----------------------------AIDMFIGLKKCGFEPDDVTMVSVTS 230
Q RA+E A+++F ++ GFEPDDV++V+V
Sbjct: 197 QMRRARELFYSMPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLP 256
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC LG LEL + Y + K + N+L++MY KCG ++ A ++F + + +V
Sbjct: 257 ACAQLGALELGRWI--YAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDV 314
Query: 291 SSWTSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
SW++ I G AA+G A EA+ F M RE + PN +TFVG+LSAC H G V EG + +
Sbjct: 315 ISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGLRYLD 374
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
MK Y +EP HYGC+VDLLGR+G ++ A + GMP+ + IWG L+ AC G+V
Sbjct: 375 QMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDV 434
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ A+ L ELEP G V+L+N+Y + G W EV R ++ R+ K P S+
Sbjct: 435 ETAVVAAERLVELEPGDVGNLVMLANVYGAAGRWGEVASTRKEIRSRSTRKTPGCSM 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 55/312 (17%)
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
H LAVRL L + + + + + + G A +VF + P L NA+I +Q+
Sbjct: 30 HGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQIPAPNLHLHNAMIKAYAQNHLH 89
Query: 204 KEAIDMFIGLKKCGFEP--------DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
++A+++++ + +C P D T + ACG+L L QVH +V +S
Sbjct: 90 RDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACGALAASRLGRQVHAHV--ARSGC 147
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYK-------------------------------VFWE 284
+S ++ NSLI+MY +CG + A K +F+
Sbjct: 148 ESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNTLISAHARMGQMRRARELFYS 207
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ V SWT+++ GY A G A++ F M+ G P+ V+ V VL AC G ++ G
Sbjct: 208 MPDKTVVSWTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELG 267
Query: 345 KHFFE------MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
+ + M+ VY ++++ + G +EEA + GM K +V+ W
Sbjct: 268 RWIYAYCSKHGMLGKVYICNA-------LMEMYAKCGCIEEALQLFHGMSEK-DVISWST 319
Query: 399 LMGACEKFGNVK 410
+G G +
Sbjct: 320 AIGGLAAHGRAR 331
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 7/226 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ YT + A++++ M G PD ++ VL A QL ALE+GR +++
Sbjct: 216 WTALVSGYTAVGDFTGAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCS 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G+ + + + +Y+K G E+A ++F E+ + SW+ I GL+ GRA+EA+
Sbjct: 276 KHGMLGKVYICNALMEMYAKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVR 335
Query: 209 MFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSL 265
+F + + G P+ +T V + SAC G ++ L +Y+ Q+K + + +
Sbjct: 336 LFEVMDREGRVMPNGITFVGLLSACSHAGLVDEGL---RYLDQMKEDYGVEPGVEHYGCV 392
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEAL 310
+D+ G+ GR+ A + P+ W S++ ++G A+
Sbjct: 393 VDLLGRSGRIQRALDTIRGMPVPPDGKIWGSLLSACRSHGDVETAV 438
>gi|222622042|gb|EEE56174.1| hypothetical protein OsJ_05117 [Oryza sativa Japonica Group]
Length = 545
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 144/408 (35%), Positives = 215/408 (52%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+ +++ L+ +L+ KA+ ++ +G PD + L AS L IG +H L
Sbjct: 87 FTSLMSLHLKLDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIF 146
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFD---------------------------- 180
R GL+S + + +Y + G FE AR VFD
Sbjct: 147 RCGLDSELVVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALS 206
Query: 181 ---ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ P + SW A+I G QD + +A+++F + G P+ +T+V V SAC +G
Sbjct: 207 FFYQMPMKSTVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGA 266
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L +H Y KS ++ ++ N+L+DMY K G + A+ VF E+ + +WT+MI
Sbjct: 267 LDLGRAIHGY--GSKSNATTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMI 324
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+ G +A++ F M SGI PN VTFV VLSAC H G +QEG+ F+ M+ VY I
Sbjct: 325 SSFTVQGNGRKAVELFWDMLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHI 384
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+PR HYGCMVDLLGR GLLEEA A+++ M ++ ++VIW L+ AC GN ++ E
Sbjct: 385 DPRLEHYGCMVDLLGRGGLLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGM 444
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + EP DG YV+L N+YA W+E +R M R + K P S
Sbjct: 445 EIIKREPGDDGVYVLLWNMYALSNRWKEALDMRKQMLSRKIYKKPGCS 492
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 40/302 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFI-SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+++H+ A+ GL N+ S I Y++ G A ++FDE P + S+ ++++ +
Sbjct: 37 QRIHAQALTHGLHPNQQSISCKIFRSYAEFGRPADAGRLFDEIPHPDIISFTSLMSLHLK 96
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+AI +F G PD V SA G LGD + VH +F + S+
Sbjct: 97 LDHHWKAISVFSHAIASGHRPDGFAAVGALSASGGLGDQRIGSVVHGLIF--RCGLDSEL 154
Query: 260 LMLNSLIDMYGKCGR-------------------------------MDLAYKVFWEIDQP 288
++ N+L+DMY +CG+ +D A F+++
Sbjct: 155 VVCNALVDMYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMK 214
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--H 346
+ SWT++I G+ + +AL+ F M G RPNH+T VGVLSAC G + G+ H
Sbjct: 215 STVSWTALITGHVQDKQPIQALELFGKMLLEGHRPNHITIVGVLSACADIGALDLGRAIH 274
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+ N ++D+ ++G + A ++ E + MK + W ++ +
Sbjct: 275 GYGSKSNA---TTNIIVTNALMDMYAKSGSIASAFSVFEEVQMK-DAFTWTTMISSFTVQ 330
Query: 407 GN 408
GN
Sbjct: 331 GN 332
>gi|212274581|ref|NP_001130403.1| uncharacterized protein LOC100191499 [Zea mays]
gi|194689034|gb|ACF78601.1| unknown [Zea mays]
gi|413932819|gb|AFW67370.1| hypothetical protein ZEAMMB73_996266 [Zea mays]
Length = 606
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/479 (32%), Positives = 255/479 (53%), Gaps = 25/479 (5%)
Query: 2 LSLVPGISLSSLRMKSS---HPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL 58
L+ P L + + KS+ HPLL L + R + AA+ PA +V L
Sbjct: 6 LTATPAPLLPANKPKSAAPQHPLLSHLPHCTSLRGLAQLHAAAVKAGLAAHPA-LVTRLL 64
Query: 59 SKCT-------NLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKA-----L 106
+ CT +L Q++ + + S A +N ++R Y R + + +
Sbjct: 65 TLCTGPGAGPAHLAYARQVFDRVTQP------SDAVWYNTLLRGYARSSSSSSSSSAAAV 118
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
+++ M GV PD YT +LKA A E GRQ H++AV+LG +++ I++Y
Sbjct: 119 RVFVRMLEEGVAPDTYTFVSLLKACAAARAGEHGRQAHAVAVKLGAAGHDYVRPTLINMY 178
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
++ GD AR F + S+NA+IA + R EA+ +F ++ G P VT++
Sbjct: 179 AECGDARAARVTFGRADGDCVVSYNAMIAAAVRSSRPGEALVLFREMQAKGLNPTPVTVI 238
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV SAC LG L+L +H YV ++ S + +L+DMY KCG ++ A VF ++
Sbjct: 239 SVLSACALLGALQLGRWLHDYVRKL--GLGSLVKVSTALVDMYAKCGSLEDAIAVFQGME 296
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ +W+ MIV YA +G EA+ F M++ G++P+ +TF+G+L AC H G V EG
Sbjct: 297 SRDRQAWSVMIVAYANHGYGREAISLFEEMKKQGMKPDDITFLGLLYACSHSGLVSEGLR 356
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+F+ MK+ + I P HYGC+ DLL R+G LE A ++ +P+ ++W L+ AC
Sbjct: 357 YFDDMKD-HGIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGH 415
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+V++G+ V + + EL+ G YV+ SN+ A+ G WEE+ R+R +M + + K+P S
Sbjct: 416 GDVELGKRVFERILELDDSHGGDYVIFSNLCANTGYWEEMNRVRKLMSDKGVVKVPGCS 474
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 227/412 (55%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + ++R M+ A F W ++ T+ +ALD++ M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
GV D YT +L A L ALE G+Q+H+ R E N F S + +YSK
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A VF + + SW A+I G Q+G +EA+ +F +++ G +PDD T+ SV S+C
Sbjct: 330 LAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCA 389
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S + + N+L+ +YGKCG ++ A+++F E+ + SW
Sbjct: 390 NLASLEEGAQFH--CLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSW 447
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T++++GYA G A E +D F M G++P+ VTF+GVLSAC G V +G+ +F M+
Sbjct: 448 TALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQ 507
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P HY CM+DL R+G L++A ++ MP + W L+ AC G++++G+
Sbjct: 508 DHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGK 567
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A++L +L+P + +YV+L +++AS+G W +V ++R M+ R + K P S
Sbjct: 568 WAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCS 619
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 158/334 (47%), Gaps = 35/334 (10%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+ + AGV P T+ V+ + L +GRQ+H +RLG + F S + +Y+
Sbjct: 132 VALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYA 191
Query: 168 KAGDFEKARKVFDEN-------------------------------PERKLGSWNAIIAG 196
K G AR+VFDE ER +W ++ G
Sbjct: 192 KVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTG 251
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
L+Q+G EA+D+F ++ G D T S+ +ACG+L LE Q+H Y+ ++ +
Sbjct: 252 LTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYI--TRTCYE 309
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
+ + ++L+DMY KC + LA VF + N+ SWT+MIVGY NG EA+ F M
Sbjct: 310 DNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEM 369
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+ GI+P+ T V+S+C + ++EG F + V + P +V L G+ G
Sbjct: 370 QRDGIKPDDFTLGSVISSCANLASLEEGAQ-FHCLALVSGLRPYVTVSNALVTLYGKCGS 428
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+E+A + + M + V W L+ +FG K
Sbjct: 429 IEDAHRLFDEMSFH-DQVSWTALVMGYAQFGKAK 461
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCG 217
+ +S ++AG ++F P+R S+NA++AG S+ G A ++ L + G
Sbjct: 81 NSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAG 140
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
P +TM V +LGD L QVH + ++ + T + L+DMY K G +
Sbjct: 141 VRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFT--GSPLVDMYAKVGPIGD 198
Query: 278 AYKVFWEIDQPNVS-------------------------------SWTSMIVGYAANGLA 306
A +VF E++ NV +WT+M+ G NGL
Sbjct: 199 ARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLE 258
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
+EALD F MR G+ + TF +L+AC ++EGK + + F
Sbjct: 259 SEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVG-SA 317
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
+VD+ + + A A+ M M N++ W ++ +G GE + E++
Sbjct: 318 LVDMYSKCRSVRLAEAVFRRM-MWKNIISWTAMIVG---YGQNGCGEEAVRVFSEMQ 370
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/442 (33%), Positives = 227/442 (51%), Gaps = 64/442 (14%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N II+ + P KA+ Y M A P+ +T P + KA A E G Q+H+
Sbjct: 96 FVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAH 155
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN------------------------ 182
++ GL + S I +Y G+ E AR++ E+
Sbjct: 156 VIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAA 215
Query: 183 -------PERKLGSWNAIIAGLS-------------------------------QDGRAK 204
++ +GSWN +++G++ + G K
Sbjct: 216 KELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYK 275
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+++F +++ P + SV +AC +LG L+ +H YV + D ++ +
Sbjct: 276 EALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNN--NSNSFDAVLGTA 333
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+DMY KCGR+D+A+ VF ++++ V +W +MI G +G A +A++ F M++ RPN
Sbjct: 334 LVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPN 393
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+T +GVLSAC H G V EG F M+ VY IEP HYGC+VDLLGRAGLL EA ++
Sbjct: 394 GITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVM 453
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MPM+ + +WG L+GAC K G+V++GE V K L ELEP + G Y +LSNIYA G W+
Sbjct: 454 YSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWD 513
Query: 445 EVERIRAVMKHRNLAKIPAYSL 466
+V +R +MK R + S+
Sbjct: 514 DVANVRKLMKERGVKTSTGISM 535
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 161/358 (44%), Gaps = 49/358 (13%)
Query: 37 ISAASSFLDTHEDPA----KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNI 92
+ AA + ED ++ + ++KC + + +++ + + + W+ +
Sbjct: 212 VEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEIS-------WSAM 264
Query: 93 IRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL 152
I Y + K+AL+++ M R + P + L VL A L AL+ GR +H+
Sbjct: 265 IDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSN 324
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ + + +Y+K G + A VF++ ++++ +WNA+I GL GRA++AI++F
Sbjct: 325 SFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFK 384
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
++K F P+ +T++ V SAC G ++ L++ + +V + ++D+ G+
Sbjct: 385 MQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPG-MEHYGCVVDLLGRA 443
Query: 273 GRMDLAYKVFWEID-QPNVSSWTSMI--------------VG------------------ 299
G + A +V + + +P+ + W +++ VG
Sbjct: 444 GLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLS 503
Query: 300 --YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
YA G ++ + M+E G++ + + VH K+ +G H MKN+Y
Sbjct: 504 NIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSH--PQMKNIY 559
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 39/325 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKA--GDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+H++A+R G + + + Y+ + A KVF+ P + +N II G
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ-------- 250
Q+ +AI + + P+ T ++ AC + E +QVH +V +
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166
Query: 251 ---------------------VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
+ SD + N++ID Y KCG ++ A ++FW ++ N
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKN 226
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW M+ G A G+ EA + F+ M+E N +++ ++ + GG +E F
Sbjct: 227 VGSWNVMVSGMAKCGMIEEARELFNEMKEK----NEISWSAMIDGYIKGGYYKEALEVFN 282
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR---AMVEGMPMKANVVIWGCLMGACEKF 406
+M+ +I PR ++ G L++ R A V + V+ L+ K
Sbjct: 283 VMQR-EEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC 341
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYV 431
G + M V + +++ E ++ A +
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMI 366
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 221/402 (54%), Gaps = 34/402 (8%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y R ++AL ++ M +GV PD ++ + + QL + G+ H +R G ES
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 156 EFCESGFISLYSKA-------------------------------GDFEKARKVFDENPE 184
+ + I +Y K G+ + A + F+ PE
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ + SWN II+GL Q +EAI++F ++ + G D VTM+S+ SACG LG L+LA
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
++ Y+ K+ + D + +L+DM+ +CG + A +F + +VS+WT+ I A
Sbjct: 492 IYYYI--EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G A A++ F M E G++P+ V FVG L+AC HGG VQ+GK F M ++ + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YGCMVDLLGRAGLLEEA ++E MPM+ N VIW L+ AC GNV+M + A+ +Q L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
P G+YV+LSN+YAS G W ++ ++R MK + L K P S
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 148/266 (55%), Gaps = 3/266 (1%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
SY F +N++IR Y +A+ +++ M +G+ PD YT P L A + A G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+H L V++G + F ++ + Y++ G+ + ARKVFDE ER + SW ++I G ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 201 GRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
AK+A+D+F + + P+ VTMV V SAC L DLE +V Y F S + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV--YAFIRNSGIEVND 271
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
LM+++L+DMY KC +D+A ++F E N+ +M Y GL EAL F+ M +S
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK 345
G+RP+ ++ + +S+C + GK
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGK 357
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN II + ++A++++ M S+ GV D T+ + A L AL++ + ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G++ + + + ++S+ GD E A +F+ R + +W A I ++ G A+ AI
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + + G +PD V V +AC G ++ ++ + ++ D + ++D
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHYGCMVD 615
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ G+ G ++ A ++ ++ +PN W S++ G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 228/412 (55%), Gaps = 36/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I Y R + A++ + M + G PD T+ L A L LE+G ++H+
Sbjct: 266 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 325
Query: 148 VR-LGLES-----------------------------NEFCESGFISLYSKAGDFEKARK 177
+ LG + N C + IS Y GD +AR
Sbjct: 326 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 385
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD++P R + W A+I G Q +A+ +F ++ +PD T+V++ + C LG
Sbjct: 386 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGA 445
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE +H Y+ + ++ D ++ +LI+MY KCG +D + ++F+E++ + +SWTS+I
Sbjct: 446 LEQGKWIHGYLDE--NRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII 503
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG +EAL F M G +P+ +TF+GVLSAC HGG V+EG+ FF MK V++I
Sbjct: 504 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 563
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN---VVIWGCLMGACEKFGNVKMGEW 414
EP+ HYGC++DLLGRAGLL+EA +++ +P++ V ++G L+ AC NV MGE
Sbjct: 564 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGER 623
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+AK L+ +E + +L+NIYAS WE+ +++R MK + K+P SL
Sbjct: 624 LAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSL 675
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N ++++Y + +K L ++ + G+ PD +T P VLKA L + G ++
Sbjct: 163 FVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGF 222
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G++ + + + I +Y + + E A+K+FDE R SWN +I+G + R ++A
Sbjct: 223 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 282
Query: 207 IDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
I+ F +++ G E PD+ T+VS SAC +L +LEL ++H Y V+ + T + N+L
Sbjct: 283 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY---VRKELGFTTRIDNAL 339
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF------------ 313
+DMY KCG +++A +F E+ NV WTSMI GY G EA D F
Sbjct: 340 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 399
Query: 314 ----------HY---------MRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
H+ M+ I+P+ T V +L+ C G +++GK
Sbjct: 400 AMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGK 450
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLY--SKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+Q+ S R+GLE + + ++ S G+ A K+F+ + L +N ++ +
Sbjct: 114 KQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYA 173
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G ++ + +F L++ G PD T V A G L D+ +V ++ VK+ D
Sbjct: 174 KRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFI--VKTGMDLD 231
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ NSLIDMY + ++ A K+F E+ + SW MI GY +A++ F M++
Sbjct: 232 NYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQ 291
Query: 319 SGI-RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G +P+ T V LSAC ++ G ++ R + ++D+ + G L
Sbjct: 292 EGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCL 349
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
AR + + M MK NV+ W ++ G+++
Sbjct: 350 NIARNIFDEMSMK-NVICWTSMISGYINCGDLR 381
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
L + +L + + ++ T M++ Y H+++ + L+ ++ K
Sbjct: 379 DLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQK------------- 425
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
+ PD +T+ +L QL ALE G+ +H + + + I +YSK G +K+
Sbjct: 426 IKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 485
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
++F E ++ SW +II GL+ +G+ EA+ +F +++ G +PDD+T + V SAC G
Sbjct: 486 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 545
Query: 237 DLELA---LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
+E K V +++ K + +ID+ G+ G +D A ++ EI N
Sbjct: 546 LVEEGRRFFNSMKKVHRIEPKVEH----YGCVIDLLGRAGLLDEAEELIQEIPIEN 597
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 254/509 (49%), Gaps = 96/509 (18%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHM-------------LHSYSAA----------- 86
K V + L T L Q+ QI+A II+T + L + S+A
Sbjct: 3 GKKVMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFD 62
Query: 87 -------FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKA-------- 130
F WN +IR Y + P++++ ++ M +P D Y+L +V++A
Sbjct: 63 EIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPG 122
Query: 131 --------------SCQLFA-------------LEIGRQL-----HSLAVRLGLESNEFC 158
LF +EI R + H V + E+
Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182
Query: 159 ESGFISL----------------------YSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
G I+L ++ GD A+K+FD ER L SW+++IA
Sbjct: 183 RVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAA 242
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++ ++ EA+ +F ++ PD VTMVSV SACG +G L + +H+ + +++ +
Sbjct: 243 YAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI--ERNRIE 300
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
D + SL+DMY KCG +D + +VF ++ +V +W++MI+G A +G ALD F M
Sbjct: 301 IDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKM 360
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
I+PN VTF+GVLSAC H G V EG +F M VY + P+ HYGC+VD+LGRAG
Sbjct: 361 ISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGR 420
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
L+EA +++ MP + ++W L+GAC + NV++ E +L ELEP DG YV+LSNI
Sbjct: 421 LQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNI 480
Query: 437 YASRGLWEEVERIRAVMKHRNLAKIPAYS 465
Y+ W++V +R +MK+ N+ K+P S
Sbjct: 481 YSQAKEWDKVVNVRRMMKNINIQKVPGSS 509
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 194/306 (63%), Gaps = 3/306 (0%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+++G + A K+FDE P++ + WNA+I G R KEA+ +F ++ PD+VTM
Sbjct: 256 YAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 315
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
VS SAC LG L++ + +H Y+ K + + + +LIDMY KCG++ A +VF E+
Sbjct: 316 VSCLSACSQLGALDVGIWIHHYI--EKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL 373
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
N +WT++I G A +G A+ A+ F M ++ + P+ VTF+G+LSAC HGG V+EG+
Sbjct: 374 PGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGR 433
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+F M + + + P+ HY CMVDLLGRAGLLEEA +++ MP++A+ V+WG L AC
Sbjct: 434 KYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRI 493
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP-AY 464
GNV MGE A L +++P G YV+L+N+Y +W+E + R +M+ R + K P ++
Sbjct: 494 HGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPDSW 553
Query: 465 SLATRL 470
SL + L
Sbjct: 554 SLLSVL 559
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 163/385 (42%), Gaps = 82/385 (21%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------F 87
L KC ++ QL QI + ++ T ++ A+ F
Sbjct: 57 LEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTF 116
Query: 88 HWNNIIRLYTRLEAPKKALDIYI-FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN IR + E P++A+ +Y + G PD YT P++ KA +L + +G ++
Sbjct: 117 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 176
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ LG +S+ F + I L GD + ARK+FD++ R L SWN++I G G + A
Sbjct: 177 VLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYC--GNLESA 234
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F + + TMVS T +++
Sbjct: 235 RKLFDSMT-------NKTMVSWT----------------------------------TMV 253
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y + G +D+A+K+F E+ +V W +MI GY EAL F+ M+ I P+ V
Sbjct: 254 VGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEV 313
Query: 327 TFVGVLSACVHGGKVQEG---KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
T V LSAC G + G H+ E +++ A ++D+ + G + +A +
Sbjct: 314 TMVSCLSACSQLGALDVGIWIHHYIEK----HELSLNVALGTALIDMYAKCGKITKAIQV 369
Query: 384 VEGMPMKANVVIWGCLMGACEKFGN 408
+ +P + N + W ++ GN
Sbjct: 370 FQELPGR-NSLTWTAIISGLALHGN 393
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL ++ M + PD T+ L A QL AL++G +H
Sbjct: 280 WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE 339
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ L N + I +Y+K G KA +VF E P R +W AII+GL+ G A AI
Sbjct: 340 KHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 399
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSLI 266
F + PD+VT + + SAC G +E + KY Q+ SK + + ++
Sbjct: 400 YFSEMIDNSVMPDEVTFLGLLSACCHGGLVE---EGRKYFSQMSSKFNLSPKLKHYSCMV 456
Query: 267 DMYGKCGRMDLA 278
D+ G+ G ++ A
Sbjct: 457 DLLGRAGLLEEA 468
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 232/411 (56%), Gaps = 36/411 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIGRQLH--- 144
WN +I Y + + A++++ M +G++PD T+ L A L LE+G+++H
Sbjct: 206 WNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYV 265
Query: 145 ---------------SLAVRLGLES------------NEFCESGFISLYSKAGDFEKARK 177
+ + G S N C + +S Y+ G+ E+AR+
Sbjct: 266 RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARE 325
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+ +P R + W A+I G Q R EA+ +F ++ +PD +VS+ + C G
Sbjct: 326 LFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGA 385
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+E +H+++ + ++ D ++ +LI+MY KCG ++ A ++F+ + + +SWTS+I
Sbjct: 386 IEQGKWIHEFIDE--NRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSII 443
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG ++AL+ F M+++G+RP+ +TF+GVLSAC HGG V+EG+ FF M+ YQI
Sbjct: 444 CGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQI 503
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV---IWGCLMGACEKFGNVKMGEW 414
+P+ HYGC+VDLLGRAGLL EA +++ +P + + ++G L+ AC +GNV+MGE
Sbjct: 504 KPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGER 563
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
VAK L + E + +L+NIYA WE+V ++R MK + K P S
Sbjct: 564 VAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCS 614
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 190/398 (47%), Gaps = 43/398 (10%)
Query: 26 CKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSA 85
CK+ T K I A + H+D + ++ CT+ N YA + ++ Y
Sbjct: 47 CKSMTHLKQ--IHAQIFRVGLHQDIVSL-NKLMAFCTDPFNGNLNYAEKMFKYI--RYPC 101
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+N II+ + + K+ L ++ + G+ PD +T P V KA L + +L
Sbjct: 102 LLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRG 161
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L + GLE + + + I +Y++ + + +FDE P+R + SWN +I+G + R ++
Sbjct: 162 LVTKTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFED 221
Query: 206 AIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
AI++F ++ + G PD+ T+VS SAC +L LEL ++H Y V+ K ++ N+
Sbjct: 222 AINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHY---VRDNVKFTPIIGNA 278
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA----------------------- 301
L+DMY KCG + +A VF E+ NV WT+M+ GYA
Sbjct: 279 LLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIW 338
Query: 302 ---ANGLA-----NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM-K 352
NG +EA+ F M+ ++P+ V +L+ C G +++GK E + +
Sbjct: 339 TAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDE 398
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
N I+ ++++ + G +E+A + G+ +K
Sbjct: 399 NRIPIDAVVGT--ALIEMYAKCGFIEKALEIFYGLRVK 434
>gi|357498595|ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
gi|355494601|gb|AES75804.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
Length = 528
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 258/493 (52%), Gaps = 92/493 (18%)
Query: 52 KIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIR--------------LYT 97
++V T L+K +L QL Q+ +H+ T + HS F+ +IR ++
Sbjct: 7 ELVTTILTKINHLNQLKQLQSHL--TTLGHS-QTHFYAFKLIRFCSLNLSNLHYAHQIFN 63
Query: 98 RLEAPKKALDIYIF--------------------MSRAGVLPDCYTLPIVLKASCQLFAL 137
+ +P +IY+F M + + P+ + P VLK+ + F +
Sbjct: 64 HIHSP----NIYLFTAIITAFSSQQHTTFKLFKTMLNSNIRPNNFIYPHVLKSVKERFLV 119
Query: 138 EIGRQLHSLAVRLGLESNEFCESGFISLYSKA---------------------------- 169
++ +H+ V+ G + E+ + YSK
Sbjct: 120 DL---VHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSG 176
Query: 170 ----GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF------IGLKKCGF- 218
GD EK VFDE +R + +WNA+I+G +Q+G E I +F GL + GF
Sbjct: 177 YLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFC 236
Query: 219 ---EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
+P+ VT+V V SACG G L+L +H YV+ + D+ + N+L+DMYGKCG +
Sbjct: 237 KGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVY--RHGFVVDSFVSNALVDMYGKCGSL 294
Query: 276 DLAYKVFWEIDQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRE--SGIRPNHVTFVGVL 332
+LA KVF E+DQ ++SW SMI YA +G +A+ F M E G+RP+ VTF+G+L
Sbjct: 295 ELARKVF-EMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLL 353
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
+AC HGG V++G +FEMM Y IEP+ AHYGC++DLLGRAG +EA +V+GM M+ +
Sbjct: 354 NACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPD 413
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
V+WG L+ C+ G + E+ AK L E++P + G +L+NIY G W+E+ + +
Sbjct: 414 EVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSK 473
Query: 453 MKHRNLAKIPAYS 465
+K + KIP S
Sbjct: 474 LKQQKSYKIPGCS 486
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 217/377 (57%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + A +A + I M + G P+ +TL +L A ++ ++++G+Q+H+ ++
Sbjct: 383 WNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSI 442
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L S+ F + I +Y+K G A+ +FD + E+ S+N +I G SQ E++
Sbjct: 443 HRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRS-EKDDVSYNTLIVGYSQSQCCFESLH 501
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G E D V+ + SAC +L + ++H + V+ + + NSL+D+
Sbjct: 502 LFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVL--VRRLLNTHPFLANSLLDL 559
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F I + +V+SW +MI+GY +G + A + F M++ G+ +HV++
Sbjct: 560 YTKGGMLATASKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSY 619
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VLSAC HGG V GK +F M I+P+ HY CMVDLLGRAG L E+ ++ MP
Sbjct: 620 IAVLSACSHGGLVDRGKKYFSQMI-AQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMP 678
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
AN +WG L+G+C G++++ A+HL EL+P G Y +L N+Y+ G+W E
Sbjct: 679 FPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANE 738
Query: 449 IRAVMKHRNLAKIPAYS 465
I+ +MK R + K PAYS
Sbjct: 739 IKTLMKSRKVQKNPAYS 755
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 168/313 (53%), Gaps = 7/313 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+ + + + L+++ MS V P TL +L A L +G+++H ++
Sbjct: 282 WNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSI 341
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R +ES+ F + + +Y+K G EKA +F+ R + SWNA+IA L+Q+G EA
Sbjct: 342 RRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFS 401
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ I ++K G P+ T+V++ AC + +++ Q+H + + SD + N+LID+
Sbjct: 402 LVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAW--SIHRSLMSDLFVSNALIDV 459
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG++ +A +F ++ +V S+ ++IVGY+ + E+L F MR +GI + V+F
Sbjct: 460 YAKCGQLSVAQDIFDRSEKDDV-SYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSF 518
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+G LSAC + ++GK +++ + P A+ ++DL + G+L A + +
Sbjct: 519 MGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLAN--SLLDLYTKGGMLATASKIFNRI 576
Query: 388 PMKANVVIWGCLM 400
K +V W ++
Sbjct: 577 TRK-DVASWNTMI 588
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 171/342 (50%), Gaps = 15/342 (4%)
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
I+R H L SA F WN++ R P +AL +Y M R+GV PD T P L A+
Sbjct: 60 ILRHHPLRLRSA-FLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAA 118
Query: 134 LFALEI-----GRQLHSLAVRLGLE-SNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
E G +LH+ A+R GL ++ F + ++ Y+ G AR+VFDE P R +
Sbjct: 119 AVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDI 178
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SWN++++ L +G ++A +G+ + G + ++VSV ACG+ D L VH
Sbjct: 179 VSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGL 238
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
V +KS S + N+L+DMYGK G ++ + +VF + + N SW S + +A G
Sbjct: 239 V--LKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHE 296
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYG 365
+ L+ F M E + P VT +L A V G GK H + + + +E
Sbjct: 297 DVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRR---AMESDIFIAN 353
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G LE+A A+ E + + NVV W ++ + G
Sbjct: 354 SLMDMYAKFGCLEKASAIFENIEGR-NVVSWNAMIANLAQNG 394
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y ++ L + M + V+P+ YT V+ L+ G QLH+ +
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G + + ++LYSK G+ KVF R + +W+ IIA SQ G +EA +
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ G +P++ + SV S CGS+ LE Q+H +V V +Q S ++ ++LI M
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS--MVCSALIIM 463
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K+F + + ++ SWT+MI GYA +G + EA++ F +++ G+RP+ VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V G ++F M Y I P HYGCM+DLL RAG L +A ++ MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + V+W L+ AC G+V G+ A + +L+P G ++ L+NI+A++G W+E
Sbjct: 584 IQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAAN 643
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK + + K P +S
Sbjct: 644 IRMLMKSKGVVKEPGWS 660
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 174/416 (41%), Gaps = 26/416 (6%)
Query: 25 LCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTN--------LLQLNQIYAHIIR 76
LC +++ T+ A + T+++P + LS N L + N +++
Sbjct: 3 LCYRQHVKRNFTVLAVAG-AKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVK 61
Query: 77 THMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPI 126
T+ L F W NII Y +AL ++ M L D + L +
Sbjct: 62 TNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSL 121
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
LK G LH +V+ GL ++ F S + +Y K G+ ++ KVFDE P R
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRN 181
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+W A+I GL + G ++ + F G+ + E D A G L +H
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+K ++ + NSL MY KCG++D F ++ +V SWT+++ Y G
Sbjct: 242 QT--LKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
+ L F MR S + PN TF V+S C + +++ G+ + V + +
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVANS 358
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
++ L + G L + M + +++ W ++ A + V GE ++L +
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA---YSQVGYGEEAFEYLSRM 410
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 4/337 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W +I R + L + M R+ V D Y I LKAS AL GR +H+
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G + N F + ++Y+K G + F + + SW I+ Q G+
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+ F ++ P++ T +V S C + L+ Q+H +V V + NS+
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VANSI 359
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ +Y KCG + KVF + ++ +W+++I Y+ G EA + MR G +PN
Sbjct: 360 MTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNE 419
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VLS C +++GK + +V +E ++ + + G + EA +
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCGSIAEASKIFM 478
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
K +++ W ++ + G+ + + +++Q++
Sbjct: 479 D-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 212/380 (55%), Gaps = 4/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y++ K++ ++ + R G+ D YT IVL + + Q+HSL +
Sbjct: 212 WNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLII 271
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S+ F + ++LYSK G A ++F+E P++ + SW II G Q G +EA+
Sbjct: 272 ERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMW 331
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ EP+ T + AC + H V + +D ++ ++++DM
Sbjct: 332 LFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKF-GLLGADVVVGSAVVDM 390
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM---RESGIRPNH 325
Y KCG M A + F E+ + +++SW +I GYA NG +AL ++ M SGI PN
Sbjct: 391 YSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNE 450
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTFVGVL AC H G ++EG +F+ M + + I+P HY CMVDLLGRAGLL+EA A++
Sbjct: 451 VTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALIL 510
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
+P+K + V+WG L+GAC+ G+V+M A+HL EP + YV+L+N Y G W E
Sbjct: 511 ALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGE 570
Query: 446 VERIRAVMKHRNLAKIPAYS 465
IR VM+ R + K S
Sbjct: 571 AVEIREVMEARGVEKTAGCS 590
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 7/308 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + + L ++ M + V PD +T I++ L G+Q+H+ V
Sbjct: 115 WNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVHADIV 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ + + F + + +Y++ G+ ARKVFD P R L +WNA+I+ S+ GR ++I
Sbjct: 171 KVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIG 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L + G D+ T V + + + A+QVH + ++ SD N+L+++
Sbjct: 231 LFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLI--IERGFCSDRFTNNALVNL 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A ++F EI +V SWT +IVG+ +G EA+ F+ M+ I PN TF
Sbjct: 289 YSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTF 348
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G+L AC Q+G+HF ++ + +VD+ + G + +A + MP
Sbjct: 349 GGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMP 408
Query: 389 MKANVVIW 396
+ ++ W
Sbjct: 409 ER-DIASW 415
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 144/325 (44%), Gaps = 14/325 (4%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KA ++ + + G++ Y I+L+A AL +L + + S SG
Sbjct: 33 KAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILSG-- 90
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
Y K G +A K+FD +R SWN +++G ++ + E + F+ ++ PD+
Sbjct: 91 --YFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNF 148
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T + C DL QVH + +V S D + +L+ MY + G + A KVF
Sbjct: 149 TYAIIIPCC----DLGFGQQVHADIVKVCSDL--DAFIGTNLLRMYAEVGEIGDARKVFD 202
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + +W +MI Y+ G ++++ F + GI + T+ VL+ +V E
Sbjct: 203 GMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFE 262
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
++ RF + +V+L + G + A + E +P +VV W ++
Sbjct: 263 AMQVHSLIIERGFCSDRFTN-NALVNLYSKCGYVASASRLFEEIP-DQDVVSWTVIIVGF 320
Query: 404 EKFGNVKMGEWVAKHLQ--ELEPWS 426
+ G+++ W+ +Q ++EP S
Sbjct: 321 LQSGHMEEAMWLFYQMQLGDIEPNS 345
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 11/190 (5%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+++ Y K G + A K+F + + SW ++ G N E L F MR S +R
Sbjct: 85 NTILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVR 144
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLLEEAR 381
P++ T+ ++ C G Q ++ ++ A G ++ + G + +AR
Sbjct: 145 PDNFTYAIIIPCCDLGFGQQVHADIVKVCSDLD------AFIGTNLLRMYAEVGEIGDAR 198
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL-QELEPWSDGAYVVLSNIYASR 440
+ +GMP + +V W ++ K+G + + L +E + Y ++ N +A+R
Sbjct: 199 KVFDGMPSRG-LVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAAR 257
Query: 441 GLWEEVERIR 450
W+ E ++
Sbjct: 258 --WQVFEAMQ 265
>gi|334186513|ref|NP_193153.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635637|sp|Q5XEY7.2|PP309_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14170
gi|332657989|gb|AEE83389.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 260 bits (665), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 222/401 (55%), Gaps = 4/401 (0%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTL 124
+LN ++ + Y F WN II ++R K++D+++ M R V PD +TL
Sbjct: 78 KLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTL 137
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
P++L+A + G +H L ++LG S+ F S + +Y G ARK+FD+ P
Sbjct: 138 PLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV 197
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + A+ G Q G A + MF + GF D V MVS+ ACG LG L+ V
Sbjct: 198 RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + + S + + N++ DMY KC +D A+ VF + + +V SW+S+I+GY +G
Sbjct: 258 HGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ F M + GI PN VTF+GVLSAC HGG V++ +F +M+ Y I P HY
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHY 374
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
+ D + RAGLLEEA +E MP+K + + G ++ C+ +GNV++GE VA+ L +L+P
Sbjct: 375 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 434
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YV L+ +Y++ G ++E E +R MK + ++K+P S
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 152 LESNEFCESGFISLYSKAGD-FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
L SN S + YSK F + VF P R + SWN II S+ G A ++ID+F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 211 IGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+ + ++ PDD T+ + AC + + + +H V +K S + ++L+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH--VLCLKLGFSSSLFVSSALVIMY 179
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
G++ A K+F ++ + +T+M GY G A L F M SG + V V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 330 GVLSACVHGGKVQEGK 345
+L AC G ++ GK
Sbjct: 240 SLLMACGQLGALKHGK 255
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 215/387 (55%), Gaps = 3/387 (0%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
H +F + ++ R R P AL Y + A + + V KA L AL G
Sbjct: 68 HPSPDSFLFCSLTRAAARRGLPAAALAFYRRLLAAALPFSSFAFTSVAKACADLSALRAG 127
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H+ AV LG S+ F ++ + LYSK G + ARK+FD +R + +WNA+I+G Q+
Sbjct: 128 MGVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLFDAIRDRSVVAWNAMISGYEQN 187
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G A AI+++ ++ G PD T V+ SAC G L+L +V + + V + + + +
Sbjct: 188 GLAGRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLI--VSERMEMNVV 245
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +L++MY +CG ++ A + F + + NV +WTSMI GY +G EA+ F MR+ G
Sbjct: 246 LGAALVNMYARCGLVNKAREWFDMLQERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQG 305
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PN VTFV VLSAC H G V +G+ F MK+VY + PR HY MVD+ GRAGLL++A
Sbjct: 306 PPPNDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDA 365
Query: 381 RAMV-EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
+ + +P + +W ++GAC+ N +G VA+ L LEP + V+LSNIYA
Sbjct: 366 MQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYAL 425
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
G VE++R M R L K YSL
Sbjct: 426 SGKMNHVEKVRNTMIKRRLKKPIGYSL 452
>gi|224139038|ref|XP_002326752.1| predicted protein [Populus trichocarpa]
gi|222834074|gb|EEE72551.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 216/383 (56%), Gaps = 3/383 (0%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
F +N +IR Y + + AL +Y M GV D +T P + KA L ++E G Q+H
Sbjct: 49 GTFEFNTMIRGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIH 108
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ GLE + F ++ I++Y K G E + VF+ R + SW+AIIA + G
Sbjct: 109 GYIFKRGLEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWS 168
Query: 205 EAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
E + +F + + G P++ +VSV SAC LG L+L H V +++ ++ + ++
Sbjct: 169 ECLSVFGEMSREGSCRPEESILVSVLSACTHLGALDLGRCTH--VTLLRNIREMNVIVQT 226
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SLIDMY KCG ++ +F + + N S++ MI G A +G EAL F M E G++P
Sbjct: 227 SLIDMYVKCGCIEKGLSLFQRMVKKNQLSYSVMITGLAMHGRGMEALQVFSDMLEEGLKP 286
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ V ++GVLSAC H G V EG F MK + IEP HYGC+V L+GRAG+L +A
Sbjct: 287 DDVVYLGVLSACNHAGLVDEGLQCFNRMKLEHGIEPTIQHYGCIVHLMGRAGMLNKALEH 346
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+ MP+K N V+W L+ AC+ N+++GE AK L EL + G YVVLSN+YA W
Sbjct: 347 IRSMPIKPNEVVWRGLLSACKFHHNLEIGEIAAKSLGELNSSNPGDYVVLSNMYARAKRW 406
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
E+V +IR M + + P +SL
Sbjct: 407 EDVAKIRTEMARKGFTQTPGFSL 429
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 11/258 (4%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAII 194
+E +Q+H+ ++ N FC S ++ S G + A +F + + +N +I
Sbjct: 1 MEEFKQVHAQVLKW---ENSFCASNLVATCALSDWGSMDYACSIFRQIDQPGTFEFNTMI 57
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G + A+ ++ + + G E D+ T ++ AC SL +E +Q+H Y+F K
Sbjct: 58 RGYVNVMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEGMQIHGYIF--KRG 115
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ D + NSLI+MYGKCG+++L+ VF +D+ +V+SW+++I +A+ G+ +E L F
Sbjct: 116 LEGDLFVQNSLINMYGKCGKIELSCSVFEHMDRRDVASWSAIIAAHASLGMWSECLSVFG 175
Query: 315 YM-RESGIRPNHVTFVGVLSACVHGGKVQEGK-HFFEMMKNVYQIEPRFAHYGCMVDLLG 372
M RE RP V VLSAC H G + G+ +++N+ ++ ++D+
Sbjct: 176 EMSREGSCRPEESILVSVLSACTHLGALDLGRCTHVTLLRNIREMNVIVQ--TSLIDMYV 233
Query: 373 RAGLLEEARAMVEGMPMK 390
+ G +E+ ++ + M K
Sbjct: 234 KCGCIEKGLSLFQRMVKK 251
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
QVH V + ++ + L+ + +G MD A +F +IDQP + +MI GY
Sbjct: 6 QVHAQVLKWENSFCASNLVATCALSDWGS---MDYACSIFRQIDQPGTFEFNTMIRGYVN 62
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ--IEPR 360
AL ++ M E G+ ++ T+ + AC ++EG ++ +++ +E
Sbjct: 63 VMNMENALFLYYEMLERGVESDNFTYPALFKACASLRSIEEG---MQIHGYIFKRGLEGD 119
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++++ G+ G +E + ++ E M + +V W ++ A G
Sbjct: 120 LFVQNSLINMYGKCGKIELSCSVFEHMD-RRDVASWSAIIAAHASLG 165
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 212/363 (58%), Gaps = 2/363 (0%)
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
II Y+ + A++ +I + + PD L VL IG H V+ G
Sbjct: 324 IISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSG 383
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
L ++ +G ISLYS+ + E A +F + E+ L +WN++I+G Q G++ +A+++F
Sbjct: 384 LSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFS 443
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ CG +PD +T+ S+ S C LG+L + +H Y+ +++ + + + +LIDMY K
Sbjct: 444 EMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYI--LRNNVRVEDFIGTALIDMYSK 501
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CGR+D A KVF+ I P +++W ++I GY+ GL + A C+ ++E G++P+ +TF+GV
Sbjct: 502 CGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGV 561
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
L+AC HGG V G +F +M Y + P HY C+V LLG+ GL +EA + M ++
Sbjct: 562 LAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQP 621
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+ +WG L+ AC VK+GE +AK L L + G YV++SN+YA G W++V R+R
Sbjct: 622 DSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVRE 681
Query: 452 VMK 454
+MK
Sbjct: 682 MMK 684
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%), Gaps = 10/243 (4%)
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKA--------SCQLFALEIGRQLHSLAVRLG 151
A AL I+ + +A V P+ +T +++KA C A RQ+ + ++ G
Sbjct: 27 NATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRG 86
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
+ + I LY K G AR +FD+ R + SWN +I G SQ+G AI +F+
Sbjct: 87 VNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFV 146
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ + F+P+ T+VS+ +CG + +H F +K+ D+ + N+L+ MY K
Sbjct: 147 DMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHG--FGIKAGFGLDSHLNNALMSMYAK 204
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
C ++ + +F E+D+ +V SW +MI Y NGL ++A+ F M + G P+ VT + +
Sbjct: 205 CDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNL 264
Query: 332 LSA 334
+SA
Sbjct: 265 VSA 267
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 182/424 (42%), Gaps = 48/424 (11%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI-G 140
SY WN +I Y++ A+ +++ M R P+ T+ + L SC F L G
Sbjct: 118 SYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTI-VSLLPSCGCFELIFQG 176
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R +H ++ G + + +S+Y+K D E ++ +FDE E+ + SWN +I Q+
Sbjct: 177 RSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQN 236
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +AI F + K GF P VT++++ SA VH YV VK +D
Sbjct: 237 GLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA------FPENVHCYV--VKCGFTNDAS 288
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
++ SL+ +Y K G + A +++ ++ + T++I Y+ G A++CF +
Sbjct: 289 VVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLD 348
Query: 321 IRPNHVTFVGVL-----------SACVHGGKVQEG--------KHFFEMMKNVYQIEPRF 361
I+P+ V +GVL HG V+ G + +IE
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408
Query: 362 AHY-----------GCMVDLLGRAGLLEEARAMVEGMPM---KANVVIWGCLMGACEKFG 407
+ + M+ +AG +A + M M K + + L+ C + G
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLG 468
Query: 408 NVKMGEWVAKH-LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK----IP 462
N+++GE + + L+ D L ++Y+ G + E++ +K LA I
Sbjct: 469 NLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIIS 528
Query: 463 AYSL 466
YSL
Sbjct: 529 GYSL 532
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 49/287 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + A++++ MS G PD T+ +L CQL L IG LHS +
Sbjct: 422 WNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYIL 481
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + +F + I +YSK G + A KVF + L +WNAII+G S G A
Sbjct: 482 RNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFG 541
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ L++ G +PD +T + V +AC G + L L+ F + +K+
Sbjct: 542 CYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLE----YFNIMTKE------------- 584
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YG P++ + ++ GL EA++ ++ + I+P+ +
Sbjct: 585 YGL---------------MPSLQHYACIVALLGKEGLFKEAIE---FINKMEIQPDSAVW 626
Query: 329 VGVLSACVHGGKVQEGK--------------HFFEMMKNVYQIEPRF 361
+L+AC +V+ G+ F+ +M N+Y I R+
Sbjct: 627 GALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRW 673
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 24/150 (16%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
SLID+Y K G A +F ++ +V SW +I GY+ NG A+ F M +
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 323 PNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
PN T V +L +C +HG ++ G + N ++ +
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNA------------LMSMY 202
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ LE ++ + + M K+ VV W ++G
Sbjct: 203 AKCDDLEASQLLFDEMDEKS-VVSWNTMIG 231
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 221/402 (54%), Gaps = 34/402 (8%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y R ++AL ++ M +GV PD ++ + + QL + G+ H +R G ES
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 156 EFCESGFISLYSKA-------------------------------GDFEKARKVFDENPE 184
+ + I +Y K G+ + A + F+ PE
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ + SWN II+GL Q +EAI++F ++ + G D VTM+S+ SACG LG L+LA
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
++ Y+ K+ + D + +L+DM+ +CG + A +F + +VS+WT+ I A
Sbjct: 492 IYYYI--EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G A A++ F M E G++P+ V FVG L+AC HGG VQ+GK F M ++ + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YGCMVDLLGRAGLLEEA ++E MPM+ N VIW L+ AC GNV+M + A+ +Q L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
P G+YV+LSN+YAS G W ++ ++R MK + L K P S
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 148/266 (55%), Gaps = 3/266 (1%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
SY F +N++IR Y +A+ +++ M +G+ PD YT P L A + A G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+H L V++G + F ++ + Y++ G+ + ARKVFDE ER + SW ++I G ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 201 GRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
AK+A+D+F + + P+ VTMV V SAC L DLE +V Y F S + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV--YAFIRNSGIEVND 271
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
LM+++L+DMY KC +D+A ++F E N+ +M Y GL EAL F+ M +S
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK 345
G+RP+ ++ + +S+C + GK
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGK 357
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN II + ++A++++ M S+ GV D T+ + A L AL++ + ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G++ + + + ++S+ GD E A +F+ R + +W A I ++ G A+ AI
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + + G +PD V V +AC G ++ ++ + ++ D + ++D
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHYGCMVD 615
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ G+ G ++ A ++ ++ +PN W S++ G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>gi|53828565|gb|AAU94392.1| At4g14170 [Arabidopsis thaliana]
gi|55733761|gb|AAV59277.1| At4g14170 [Arabidopsis thaliana]
Length = 458
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 222/401 (55%), Gaps = 4/401 (0%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTL 124
+LN ++ + Y F WN II ++R K++D+++ M R V PD +TL
Sbjct: 59 KLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTL 118
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
P++L+A + G +H L ++LG S+ F S + +Y G ARK+FD+ P
Sbjct: 119 PLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV 178
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + A+ G Q G A + MF + GF D V MVS+ ACG LG L+ V
Sbjct: 179 RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 238
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + + S + + N++ DMY KC +D A+ VF + + +V SW+S+I+GY +G
Sbjct: 239 HGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 296
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ F M + GI PN VTF+GVLSAC HGG V++ +F +M+ Y I P HY
Sbjct: 297 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHY 355
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
+ D + RAGLLEEA +E MP+K + + G ++ C+ +GNV++GE VA+ L +L+P
Sbjct: 356 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 415
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YV L+ +Y++ G ++E E +R MK + ++K+P S
Sbjct: 416 RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 456
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 152 LESNEFCESGFISLYSKAGD-FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
L SN S + YSK F + VF P R + SWN II S+ G A ++ID+F
Sbjct: 43 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 102
Query: 211 IGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+ + ++ PDD T+ + AC + + + +H V +K S + ++L+ MY
Sbjct: 103 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH--VLCLKLGFSSSLFVSSALVIMY 160
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
G++ A K+F ++ + +T+M GY G A L F M SG + V V
Sbjct: 161 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 220
Query: 330 GVLSACVHGGKVQEGK 345
+L AC G ++ GK
Sbjct: 221 SLLMACGQLGALKHGK 236
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 207/366 (56%), Gaps = 3/366 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +++ Y + + ++ M G+ D TL ++KA +FA ++G+ +H +++
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R ++ +++ ++ I +Y K + ARK+F+ + +R + W +I+G ++ RA EA
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D+F + + P+ T+ ++ +C SLG L VH Y+ +++ + D + S ID
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM--IRNGIEMDAVNFTSFID 355
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG + +A VF + + NV SW+SMI + NGL EALDCFH M+ + PN VT
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV +LSAC H G V+EG FE M Y + P HY CMVDLLGRAG + EA++ ++ M
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+K WG L+ AC V + +A+ L +EP YV+LSNIYA G+WE V
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVN 535
Query: 448 RIRAVM 453
+R M
Sbjct: 536 CVRRKM 541
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 7/317 (2%)
Query: 89 WNNIIRLYTRLEAP--KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN I+ Y++ + L +Y M R D + L +KA L LE G +H L
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A++ GL+ +++ + +Y++ G E A+KVFDE P R W ++ G + + E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F ++ G D +T++ + ACG++ ++ VH + +SD L S+I
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA-SII 253
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC +D A K+F NV WT++I G+A A EA D F M I PN
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T +L +C G ++ GK M++N IE ++ +D+ R G ++ AR + +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRN--GIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 386 GMPMKANVVIWGCLMGA 402
MP + NV+ W ++ A
Sbjct: 372 MMPER-NVISWSSMINA 387
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 214/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y ++ L + M + V+P+ YT V+ L+ G QLH+ +
Sbjct: 286 WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVL 345
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+G + + ++LYSK G+ KVF R + +W+ IIA SQ G +EA +
Sbjct: 346 CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFE 405
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ G +P++ + SV S CGS+ LE Q+H +V V +Q S ++ ++LI M
Sbjct: 406 YLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTS--MVCSALIIM 463
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K+F + + ++ SWT+MI GYA +G + EA++ F +++ G+RP+ VTF
Sbjct: 464 YAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTF 523
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V G ++F M Y I P HYGCM+DLL RAG L +A ++ MP
Sbjct: 524 IGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMP 583
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + V+W L+ AC G+V G+ A + +L+P G ++ L+NI+A++G W+E
Sbjct: 584 IQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAAN 643
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK + + K P +S
Sbjct: 644 IRMLMKSKGVVKEPGWS 660
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 176/416 (42%), Gaps = 26/416 (6%)
Query: 25 LCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTN--------LLQLNQIYAHIIR 76
LC +++ T+ A + T+++P + LS N L + N +++
Sbjct: 3 LCYRQHVKRNFTVLAVAG-AKTNDNPRHLYTKPLSLTLNAHFSNKVDLAEANNQLKILVK 61
Query: 77 THMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPI 126
T+ L F W NII Y +AL ++ M ++ + D + L +
Sbjct: 62 TNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSL 121
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
LK G LH +V+ GL ++ F S + +Y K G+ ++ KVFDE P R
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRN 181
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+W A+I GL + G ++ + F G+ + E D A G L +H
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+K ++ + NSL MY KCG++D F ++ +V SWT+++ Y G
Sbjct: 242 QT--LKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
+ L F MR S + PN TF V+S C + +++ G+ + V + +
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVANS 358
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
++ L + G L + M + +++ W ++ A + V GE ++L +
Sbjct: 359 IMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA---YSQVGYGEEAFEYLSRM 410
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 147/337 (43%), Gaps = 4/337 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W +I R + L + M R+ V D Y I LKAS AL GR +H+
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G + N F + ++Y+K G + F + + SW I+ Q G+
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+ F ++ P++ T +V S C + L+ Q+H +V V + NS+
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALS--VANSI 359
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ +Y KCG + KVF + ++ +W+++I Y+ G EA + MR G +PN
Sbjct: 360 MTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNE 419
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VLS C +++GK + +V +E ++ + + G + EA +
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHVLSV-GLEQTSMVCSALIIMYAKCGSIAEASKIFM 478
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
K +++ W ++ + G+ + + +++Q++
Sbjct: 479 D-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKV 514
>gi|7362769|emb|CAB83139.1| putative protein [Arabidopsis thaliana]
Length = 558
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/409 (36%), Positives = 222/409 (54%), Gaps = 43/409 (10%)
Query: 78 HMLHSYSAAFHWNNIIR-LYTRLEAPKK--ALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
H+ H +F WN IIR + + +P++ + +Y+ M V PD +T P +L +
Sbjct: 16 HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNP 75
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF---------------------- 172
L +G++ H+ + GL+ + F + +++YS GD
Sbjct: 76 LHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVV 135
Query: 173 ---------EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-----KCGF 218
+ ARK+FDE PER + SW+ +I G G+ KEA+D+F ++ +
Sbjct: 136 NAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFV 195
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P++ TM +V SACG LG LE VH Y+ K + D ++ +LIDMY KCG ++ A
Sbjct: 196 RPNEFTMSTVLSACGRLGALEQGKWVHAYI--DKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 279 YKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNHVTFVGVLSACV 336
+VF + + +V ++++MI A GL +E F M S I PN VTFVG+L ACV
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G + EGK +F+MM + I P HYGCMVDL GR+GL++EA + + MPM+ +V+IW
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
G L+ G++K E K L EL+P + GAYV+LSN+YA G W E
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWME 422
>gi|115440727|ref|NP_001044643.1| Os01g0819800 [Oryza sativa Japonica Group]
gi|21104789|dbj|BAB93376.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113534174|dbj|BAF06557.1| Os01g0819800 [Oryza sativa Japonica Group]
Length = 646
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD--FEKARKVFDENP 183
+ L A + L I QLH+LA R GL +N + +S+Y++ G AR+VF+E P
Sbjct: 168 VTLLALVPVAPLGIVPQLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMP 227
Query: 184 E--RKLGSWNAIIAGLSQDGRAKEAIDMFI---GLKKCGFEPDDVTMVSVTSACGSLGDL 238
R L SWNA+I+ +Q+G A EA++++ G + G EPD VT+V V S+C G
Sbjct: 228 RASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGAR 287
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ L V +YV + + + N+LI+ + +CG + A ++F E+ + +V SWT++I+
Sbjct: 288 RVGLDVERYVRDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTTLII 347
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G + A+D F M P+ V VG+LSAC H G EG+ +F M+ Y +
Sbjct: 348 GYGMHGQGDIAVDLFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLR 407
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY CMVDLLGRAG L+EAR ++ MPM A+ +WG L+GAC+ NV+MGE +
Sbjct: 408 PKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFER 467
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ LEP + G YV+++NIYA G + V ++RA M+ R L K P S
Sbjct: 468 VVSLEPANVGYYVLMANIYADAGQLDGVAKVRAAMRRRGLRKEPGCS 514
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 157/332 (47%), Gaps = 31/332 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +R TRL ++AL + + P LP + + +L Q+H+LA
Sbjct: 26 WSARVRTLTRLGRHREALAL-LRHGDPSPPPHALALPAAVISCAKLHLASGVAQIHALAA 84
Query: 149 RLGL--ESNEFCESGFISLYSKAGDFEKARKVFDE------NPERKLGSWNAIIAGLSQD 200
+ GL S+ + S +S YS+ AR++ DE P ++N++I+G +
Sbjct: 85 KRGLLPSSDAYLLSALLSSYSRLRLLPLARQLLDELPLASTPPATARTAFNSLISGCALH 144
Query: 201 GRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G +F ++ G D VT++++ + L + Q+H +S ++T
Sbjct: 145 GVPAGCFSLFRRMRVAAGVRFDAVTLLALV----PVAPLGIVPQLH--ALAARSGLAANT 198
Query: 260 LMLNSLIDMY--GKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHY 315
+ N L+ +Y G G LA +VF E+ + ++ SW ++I +A NGLA EA++ +
Sbjct: 199 SVANCLVSVYARGGGGGASLARQVFEEMPRASRDLVSWNAVISAHAQNGLAVEAVELYRR 258
Query: 316 MR---ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMV 368
MR G+ P+ VT VGVLS+C H G + G ++ + V P F ++
Sbjct: 259 MRGPEGGGVEPDAVTLVGVLSSCAHTGARRVG---LDVERYVRDTIPGFRDNLPLCNALI 315
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ R G L +A+ + + MP + +VV W L+
Sbjct: 316 NFHARCGSLAQAQELFDEMPER-SVVSWTTLI 346
>gi|296082968|emb|CBI22269.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 153/444 (34%), Positives = 228/444 (51%), Gaps = 42/444 (9%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYS-------AAFH-------------------- 88
+ L +C++L Q+ QI+A +++ + LH S AAF
Sbjct: 22 SDLHRCSSLNQVKQIHAQVLKAN-LHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 89 --WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+N +IR + R P A ++ M +GV D +T P +LKA + + +H+
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQ 140
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++G + F + I Y K G+ +AR++FDE PER SWN I+ G + G A
Sbjct: 141 VEKMGFCLDIFVPNSLIDSYFKLGELGEARRLFDEMPERDTVSWNTILDGYVKAGEMNAA 200
Query: 207 IDMFIGLK----------KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++F + + G + DD T++S+ SAC G L L +VH + +++ K
Sbjct: 201 FELFEKMPARNVVSWSTMEAGLKFDDGTVISILSACAVSGLLGLGKRVHASI--ERTRFK 258
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
T + N+LIDMY KCG ++ A +F + + +V SW ++I G A +G +AL F M
Sbjct: 259 CSTPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRM 318
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+ G P+ VTFVGVL AC H G V EG H+F M+ Y + P HYGCMVDLLGR G
Sbjct: 319 KGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGR 378
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
L+EA +V MP++ N +IWG L+GAC + E V L + E G +LSNI
Sbjct: 379 LKEAFRLVHSMPLEPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNI 438
Query: 437 YASRGLWEEVERIRAVMKHRNLAK 460
YA+ G W+ IR MK ++ K
Sbjct: 439 YAAAGDWDNFANIRLRMKSTSIQK 462
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 222/380 (58%), Gaps = 6/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG-RQLHSLA 147
WN+II + A++++ M +GV PD TL + L ++ E+G + +H
Sbjct: 237 WNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTL-VSLASAVAQCGDELGAKSVHCYV 295
Query: 148 VRLGLESNEFCE-SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
R G + + + + +Y+K + A+KVFD P+R + SWN +I G Q+G A EA
Sbjct: 296 RRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEA 355
Query: 207 IDMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
I ++ + G +P T VSV A LG L+ +++H +K+ D + L
Sbjct: 356 IRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMH--ALSIKTGLNLDVYVTTCL 413
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
ID+Y KCG++ A +F + + + W ++I G +G +AL F M++ I+P+H
Sbjct: 414 IDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDH 473
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTFV +L+AC H G V +G+ FF++M+ VY I P HY CMVD+LGRAG L+EA ++
Sbjct: 474 VTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQ 533
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP+K + +WG L+GAC GNV+MG+ +++L EL+P + G YV++SN+YA G W+
Sbjct: 534 SMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDG 593
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V+ +R++++ +NL K P +S
Sbjct: 594 VDAVRSLVRRQNLQKTPGWS 613
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 155/315 (49%), Gaps = 9/315 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ R A+ + M GV D TL VL L + +H AV
Sbjct: 136 WNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAV 195
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL F + I +Y K G +A VF R L +WN+II+ Q G+ A++
Sbjct: 196 KHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVE 255
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + G PD +T+VS+ SA GD A VH YV + + D + N+++DM
Sbjct: 256 LFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRR-RGWDVGDIIAGNAMVDM 314
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPNHVT 327
Y K ++D A KVF + +V SW ++I GY NGLANEA+ ++ M G++P T
Sbjct: 315 YAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGT 374
Query: 328 FVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
FV VL A + G +Q+G + +K ++ C++DL + G L EA + E
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVT--TCLIDLYAKCGKLVEAMFLFEH 432
Query: 387 MPMKA----NVVIWG 397
MP ++ N +I G
Sbjct: 433 MPRRSTGPWNAIIAG 447
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 7/283 (2%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARK 177
PD +T P +++A+ + QLH+ A+RLGL N F + Y + G +A +
Sbjct: 67 PDSFTFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYR 123
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VFDE PER + +WNA+++GL ++ RA +A+ + + G D VT+ SV C LGD
Sbjct: 124 VFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGD 183
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LAL +H V+ VK + + N+LID+YGK G + A+ VF + ++ +W S+I
Sbjct: 184 RALALVMH--VYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A++ FH M ESG+ P+ +T V + SA G K ++
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
MVD+ + ++ A+ + + +P + +VV W L+
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDR-DVVSWNTLI 343
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 228/412 (55%), Gaps = 36/412 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I Y R + A++ + M + G PD T+ L A L LE+G ++H+
Sbjct: 312 WNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 371
Query: 148 VR-LGLES-----------------------------NEFCESGFISLYSKAGDFEKARK 177
+ LG + N C + IS Y GD +AR
Sbjct: 372 RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARD 431
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD++P R + W A+I G Q +A+ +F ++ +PD T+V++ + C LG
Sbjct: 432 LFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGA 491
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
LE +H Y+ + ++ D ++ +LI+MY KCG +D + ++F+E++ + +SWTS+I
Sbjct: 492 LEQGKWIHGYLDE--NRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII 549
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG +EAL F M G +P+ +TF+GVLSAC HGG V+EG+ FF MK V++I
Sbjct: 550 CGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRI 609
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN---VVIWGCLMGACEKFGNVKMGEW 414
EP+ HYGC++DLLGRAGLL+EA +++ +P++ V ++G L+ AC NV MGE
Sbjct: 610 EPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGER 669
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+AK L+ +E + +L+NIYAS WE+ +++R MK + K+P SL
Sbjct: 670 LAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSL 721
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 150/291 (51%), Gaps = 35/291 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N ++++Y + +K L ++ + G+ PD +T P VLKA L + G ++
Sbjct: 209 FVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGF 268
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G++ + + + I +Y + + E A+K+FDE R SWN +I+G + R ++A
Sbjct: 269 IVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDA 328
Query: 207 IDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
I+ F +++ G E PD+ T+VS SAC +L +LEL ++H Y V+ + T + N+L
Sbjct: 329 INTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY---VRKELGFTTRIDNAL 385
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF------------ 313
+DMY KCG +++A +F E+ NV WTSMI GY G EA D F
Sbjct: 386 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 445
Query: 314 ----------HY---------MRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
H+ M+ ++P+ T V +L+ C G +++GK
Sbjct: 446 AMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGK 496
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 142/308 (46%), Gaps = 13/308 (4%)
Query: 111 FMSRAGVLPDCYTLPIVLKASC-----QLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
F S ++P + + K SC +++ +Q+ S R+GLE + + ++
Sbjct: 125 FSSSPHLVPVLLRISKLTKKSCIECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAF 184
Query: 166 Y--SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
S G+ A K+F+ + L +N ++ ++ G ++ + +F L++ G PD
Sbjct: 185 CADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGF 244
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T V A G L D+ +V ++ VK+ D + NSLIDMY + ++ A K+F
Sbjct: 245 TYPFVLKAIGCLRDVRQGEKVRGFI--VKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD 302
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI-RPNHVTFVGVLSACVHGGKVQ 342
E+ + SW MI GY +A++ F M++ G +P+ T V LSAC ++
Sbjct: 303 EMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLE 362
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G ++ R + ++D+ + G L AR + + M MK NV+ W ++
Sbjct: 363 LGDEIHNYVRKELGFTTRIDN--ALLDMYAKCGCLNIARNIFDEMSMK-NVICWTSMISG 419
Query: 403 CEKFGNVK 410
G+++
Sbjct: 420 YINCGDLR 427
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 114/236 (48%), Gaps = 20/236 (8%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
L + +L + + ++ T M++ Y H+++ + L+ ++ +
Sbjct: 425 DLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQR------------- 471
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
V PD +T+ +L QL ALE G+ +H + + + I +YSK G +K+
Sbjct: 472 VKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSL 531
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
++F E ++ SW +II GL+ +G+ EA+ +F +++ G +PDD+T + V SAC G
Sbjct: 532 EIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGG 591
Query: 237 DLELA---LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
+E K V +++ K + +ID+ G+ G +D A ++ EI N
Sbjct: 592 LVEEGRRFFNSMKKVHRIEPKVEH----YGCVIDLLGRAGLLDEAEELIQEIPIEN 643
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 220/385 (57%), Gaps = 13/385 (3%)
Query: 87 FHWNNIIRLYTRLEAPKKA-LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR Y R E P++A + +Y M GV PD +T P+VLKA L LE GR++H
Sbjct: 129 FLWNVLIRAYAR-EGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ F +G + +Y+K G + AR VFD R WN++IA Q+GR E
Sbjct: 188 RVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPME 247
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLM 261
A+ + + G P T+VS SA L ++H + F ++ K K+
Sbjct: 248 ALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKLKT---- 303
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESG 320
SL+DMY K G + +A +F ++ + + SW +MI GY +G A+EAL F+ M+ ++
Sbjct: 304 --SLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQ 361
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+++TFVGVLSAC HGG V+E K FF +M N Y I+P HY C++D+LG G EEA
Sbjct: 362 VTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEA 421
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+++GM ++ + IWG L+ C+ NV++GE + L ELEP G YV LSNIYA
Sbjct: 422 YDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQS 481
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G WE+ R+R +M +R L KI A S
Sbjct: 482 GKWEKAARVRKLMTNRGLKKILACS 506
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 136/276 (49%), Gaps = 8/276 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L++ +L GRQLH + GL + + + LY+ G AR++FD P+R
Sbjct: 68 ILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRN 127
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +I +++G + A+ ++ G+ + G EPD+ T V AC +L DLE +VH+
Sbjct: 128 VFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQ 187
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V + Q D + ++DMY KCG +D A VF I + W SMI Y NG
Sbjct: 188 RVSGTRWGQ--DVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRP 245
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHY 364
EAL M +GI P T V +SA + G+ H F + + ++ +
Sbjct: 246 MEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRG-FGLQDKLKT- 303
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ ++G ++ AR + E + MK +V W ++
Sbjct: 304 -SLVDMYAKSGWVQVARVLFEQL-MKRELVSWNAMI 337
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 213/366 (58%), Gaps = 3/366 (0%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ES 154
Y+R +AL +Y M V P + + LKA L +GR +H+ V+ + E+
Sbjct: 150 YSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEA 209
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
++ + + LY + G F++ KVF+E P+R + SWN +IAG + GR E + F ++
Sbjct: 210 DQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQ 269
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ G +T+ ++ C + L ++H + +KS++ +D +LNSL+DMY KCG
Sbjct: 270 REGMGFSWITLTTMLPVCAQVTALHSGKEIHGQI--LKSRKNADVPLLNSLMDMYAKCGE 327
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
+ KVF + +++SW +M+ G++ NG +EAL F M GI PN +TFV +LS
Sbjct: 328 IGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSG 387
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
C H G EGK F + + ++P HY C+VD+LGR+G +EA ++ E +PM+ +
Sbjct: 388 CSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGS 447
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
IWG L+ +C +GNV + E VA+ L E+EP + G YV+LSNIYA+ G+WE+V+R+R +M
Sbjct: 448 IWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMA 507
Query: 455 HRNLAK 460
+ K
Sbjct: 508 LTGMKK 513
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLG--LESNEFCESGFISLYSKAGDFEKARKVF- 179
++ + L A +LE GR+LH +R + N ++ I+LYS G +AR+VF
Sbjct: 72 SISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ 131
Query: 180 --DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
DE P + W A+ G S++G + EA+ ++ + C +P + AC L +
Sbjct: 132 IDDEKPPEE-PVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDN 190
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+ +H + + ++D ++ N+L+ +Y + G D KVF E+ Q NV SW ++I
Sbjct: 191 ALVGRAIHAQIVK-HDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLI 249
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
G+A G E L F M+ G+ + +T +L C + GK
Sbjct: 250 AGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEI 299
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 120/265 (45%), Gaps = 5/265 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + L + M R G+ TL +L Q+ AL G+++H +
Sbjct: 245 WNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQIL 304
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + + +Y+K G+ KVFD + L SWN ++AG S +G+ EA+
Sbjct: 305 KSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALC 364
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G EP+ +T V++ S C G ++ V Q Q S L+D+
Sbjct: 365 LFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPS-LEHYACLVDI 423
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV- 326
G+ G+ D A V I +P+ S W S++ G N AL R I PN+
Sbjct: 424 LGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYG--NVALAEVVAERLFEIEPNNPG 481
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM 351
+V + + + G ++ K EMM
Sbjct: 482 NYVMLSNIYANAGMWEDVKRVREMM 506
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ--P 288
AC S LE ++H ++ + +++ + + LI +Y CGR++ A +VF D+ P
Sbjct: 79 ACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPP 138
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
W +M +GY+ NG ++EAL + M ++P + F L AC G+
Sbjct: 139 EEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIH 198
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ E ++ L G +E + E MP + NVV W L+ G
Sbjct: 199 AQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQR-NVVSWNTLIAGFAGQGR 257
Query: 409 V 409
V
Sbjct: 258 V 258
>gi|357521772|ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
gi|355513712|gb|AES95335.1| Selenium binding protein-like protein [Medicago truncatula]
Length = 611
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 211/386 (54%), Gaps = 11/386 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + P++AL+++ M R GV + T+ L A + ++ GR +H
Sbjct: 176 WTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVC 235
Query: 149 RLGLE-------SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+ G + SN + + +Y+K G AR++F++ PER + +WN +I +Q
Sbjct: 236 KAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYE 295
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
R EA+ +F + GF PD T +SV S C L L VH Y+ +KS D +
Sbjct: 296 RYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYL--LKSNMAKDIAL 353
Query: 262 LNSLIDMYGKCGRMDLAYKVFWE-IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-S 319
+L+DMY K G + A K+F +++ +V WTSMI A +G NEAL F M+E S
Sbjct: 354 ATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDS 413
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+ P+H+T++GVL AC H G V+E + F +M Y I P HY CMVDLL RAG E
Sbjct: 414 SLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFRE 473
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A ++E M ++ N+ IWG L+ C+ N+ + V L ELEP G Y +LSNIYA+
Sbjct: 474 AEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYAN 533
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
G WEEV R R +MKH+ +AK +S
Sbjct: 534 SGKWEEVNRTRKMMKHKRIAKTIGHS 559
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 203/410 (49%), Gaps = 32/410 (7%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSF-LDTHEDPAKIVATQLS 59
+LSL+P + L+ K+SH L+ T K + +S F +D+H D +
Sbjct: 7 ILSLLPKCK-TLLQFKTSHALI-LTTPTTINTKIIPLSKLIDFCVDSHFD-------EYF 57
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
NLL QI++ + +N++I+ Y + P +L +Y M + G P
Sbjct: 58 NYANLL-FRQIHS-----------PNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSP 105
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D +T P VLKA ++ G+ +HS ++ G E+N + +G +++Y + + E KVF
Sbjct: 106 DHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVF 165
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ P+ + +W +I G + + +EA+++F + + G E ++VTMV+ AC D++
Sbjct: 166 DKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVD 225
Query: 240 LALQVHKYVFQVKSK-----QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
VH+ V + S+ ++ ++++MY KCG +++A ++F ++ + N+ +W
Sbjct: 226 TGRWVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWN 285
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMK 352
MI Y NEAL F YM +G P+ TF+ VLS C + G+ H + +
Sbjct: 286 CMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKS 345
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
N+ + A ++D+ + G L A+ + K +VV+W ++ A
Sbjct: 346 NMAK---DIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINA 392
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 217/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + + ++AL + M GV PD L A + A+ G Q+H+
Sbjct: 415 WTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY 474
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G ++ + ++LY++ G E+A +F E + +WN +I+G Q ++A+
Sbjct: 475 VSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALM 534
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + + T +S SA +L D++ QVH VK+ S+T + N+LI +
Sbjct: 535 VFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRA--VKTGHTSETEVANALISL 592
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG ++ A +F E+ N SW ++I + +G EALD F M++ G++PN VTF
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V+EG +F+ M NVY + P HY C+VD+LGRAG L+ AR V+ MP
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ AN +IW L+ AC+ N+++GE AKHL ELEP +YV+LSN YA G W ++
Sbjct: 713 ITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQ 772
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +MK R + K P S
Sbjct: 773 VRKMMKDRGIRKEPGRS 789
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 173/320 (54%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y ++ K+ +I+ M G+ P+ +T P +L+ +E+G Q+HSL++
Sbjct: 314 WNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSI 373
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ + I +YSK +KARK+ + +R + SW ++IAG Q +EA+
Sbjct: 374 KNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALA 433
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++ CG PD++ + S SAC + + LQ+H V+ S +D + N+L+++
Sbjct: 434 TFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY--VSGYAADISIWNTLVNL 491
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR + A+ +F EID + +W +I G+ + L +AL F M ++G + N TF
Sbjct: 492 YARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTF 551
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +SA + +++GK +K + E A+ ++ L G+ G +E+A+ + M
Sbjct: 552 ISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--ALISLYGKCGSIEDAKMIFSEM 609
Query: 388 PMKANVVIWGCLMGACEKFG 407
++ N V W ++ +C + G
Sbjct: 610 SLR-NEVSWNTIITSCSQHG 628
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 169/340 (49%), Gaps = 6/340 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + K+A +Y M V+P Y L VL A + GR +H+
Sbjct: 112 WVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY 171
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S F + I+LY G F+ A +VF + ++N +I+G +Q G + A+
Sbjct: 172 KQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQ 231
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD VT+ S+ +AC S+GDL+ Q+H Y+ +K+ D + SL+D+
Sbjct: 232 IFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYL--LKAGMSFDYITEGSLLDL 289
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A+ +F D+ NV W M+V Y ++ + F M+ +GI PN T+
Sbjct: 290 YVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTY 349
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+L C G+++ G+ + +KN ++ + + G ++D+ + L++AR ++E M
Sbjct: 350 PCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--GVLIDMYSKYRCLDKARKILE-M 406
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
K +VV W ++ + + K +Q+ W D
Sbjct: 407 LEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPD 446
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 11/327 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I + + + AL I+ M +G+ PDC T+ +L A + L+ G+QLHS +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G+ + E + LY K GD E A +F+ + WN ++ Q ++ +
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G P+ T + C G +EL Q+H +K+ +SD + LIDM
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHS--LSIKNGFESDMYVSGVLIDM 390
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K +D A K+ +++ +V SWTSMI GY + EAL F M++ G+ P+++
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVY--QIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
SAC +++G ++ VY + + +V+L R G EEA ++
Sbjct: 451 ASAASACAGIKAMRQG---LQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGE 413
+ K + G + G FG ++ E
Sbjct: 508 IDHKDEITWNGLISG----FGQSRLYE 530
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H+ +V GL ++ + I LY+K G +AR+VF E R SW A+++G +Q G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
KEA ++ + P + SV SAC +H V+ K S+T +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVY--KQAFCSETFV 181
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+LI +Y G LA +VF ++ + ++ ++I G+A G AL F M+ SG+
Sbjct: 182 GNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
RP+ VT +L+AC G +Q+GK + + + G ++DL + G +E A
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 382 AMVEGMPMKANVVIWGCLMGA 402
+ + + NVV+W ++ A
Sbjct: 301 DIFN-LGDRTNVVLWNLMLVA 320
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A+ + +NPE+ L +++A + RA + D+ L+ C G
Sbjct: 15 AKFIVPDNPEKIL----SLVAAKASHHRALGSADLTCALQACR---------------GR 55
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L L++H V +D L+ N LID+Y K G + A +VF E+ + SW
Sbjct: 56 GNRWPLVLEIH--ATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWV 113
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+M+ GYA GL EA + M + + P VLSAC G +G+
Sbjct: 114 AMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGR 164
>gi|125528180|gb|EAY76294.1| hypothetical protein OsI_04228 [Oryza sativa Indica Group]
Length = 646
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 205/347 (59%), Gaps = 7/347 (2%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD--FEKARKVFDENP 183
+ L A + L I QLH+LA R GL +N + +S+Y++ G AR+VF+E P
Sbjct: 168 VTLLALVPVAPLGIVPQLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMP 227
Query: 184 E--RKLGSWNAIIAGLSQDGRAKEAIDMFI---GLKKCGFEPDDVTMVSVTSACGSLGDL 238
R L SWNA+I+ +Q+G A EA++++ G + G EPD VT+V V S+C G
Sbjct: 228 RASRDLVSWNAVISAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGAR 287
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ L V +YV + + + N+LI+ + +CG + A ++F E+ + +V SWT++I+
Sbjct: 288 RVGLDVEQYVRDTIPGFRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTALII 347
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G + A+D F M P+ V VG+LSAC H G EG+ +F M+ Y +
Sbjct: 348 GYGMHGQGDIAVDLFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLR 407
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY CMVDLLGRAG L+EAR ++ MPM A+ +WG L+GAC+ NV+MGE +
Sbjct: 408 PKLEHYTCMVDLLGRAGRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFER 467
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ LEP + G YV+++NIYA G + V ++RA M+ R L K P S
Sbjct: 468 VVSLEPANVGYYVLMANIYADAGQLDGVAKVRAAMRRRGLRKEPGCS 514
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 156/329 (47%), Gaps = 25/329 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +R TRL ++AL + + P LP + + +L Q+H+LA
Sbjct: 26 WSARVRTLTRLGRHREALAL-LRHGDPSPPPHALALPAAVISCAKLHLASGVAQIHALAA 84
Query: 149 RLGL--ESNEFCESGFISLYSKAGDFEKARKVFDE------NPERKLGSWNAIIAGLSQD 200
+ GL S+ + S +S YS+ AR++ DE P ++N++I+G +
Sbjct: 85 KRGLLPSSDAYLLSALLSSYSRLRLLPLARQLLDELPLASTPPATARTAFNSLISGCALH 144
Query: 201 GRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G +F ++ G D VT++++ + L + Q+H +S ++T
Sbjct: 145 GVPAGCFSLFRRMRVAAGVRFDAVTLLALV----PVAPLGIVPQLH--ALAARSGLAANT 198
Query: 260 LMLNSLIDMY--GKCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHY 315
+ N L+ +Y G G LA +VF E+ + ++ SW ++I +A NGLA EA++ +
Sbjct: 199 SVANCLVSVYARGGGGGASLARQVFEEMPRASRDLVSWNAVISAHAQNGLAVEAVELYRR 258
Query: 316 MR---ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN-VYQIEPRFAHYGCMVDLL 371
MR G+ P+ VT VGVLS+C H G + G + +++ + +++
Sbjct: 259 MRGPEGGGVEPDAVTLVGVLSSCAHTGARRVGLDVEQYVRDTIPGFRDNLPLCNALINFH 318
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLM 400
R G L +A+ + + MP + +VV W L+
Sbjct: 319 ARCGSLAQAQELFDEMPER-SVVSWTALI 346
>gi|15217517|ref|NP_174603.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168867|sp|Q9C501.1|PPR70_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g33350
gi|12322383|gb|AAG51215.1|AC051630_12 unknown protein; 15445-13829 [Arabidopsis thaliana]
gi|12322567|gb|AAG51281.1|AC027035_4 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332193465|gb|AEE31586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 538
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 229/407 (56%), Gaps = 27/407 (6%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIV----LKASCQL 134
LH+ S+AF + RL P+ IY + + L ++ P+V K+ L
Sbjct: 104 LHA-SSAF---SFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 135 FALEIGRQLHSLAVRLG------------LESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+ + LHS A + E N + +S Y+++GD A +F++
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM 219
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELA 241
PER + SWNAI+A +Q+G EA+ +F + + P++VT+V V SAC G L+LA
Sbjct: 220 PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H + + + SD + NSL+D+YGKCG ++ A VF + ++++W SMI +A
Sbjct: 280 KGIHAFAY--RRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 302 ANGLANEALDCFHYMRE---SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
+G + EA+ F M + + I+P+H+TF+G+L+AC HGG V +G+ +F++M N + IE
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGC++DLLGRAG +EA ++ M MKA+ IWG L+ AC+ G++ + E K+
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L L P + G +++N+Y G WEE R R ++KH+N K P +S
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 215/378 (56%), Gaps = 2/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + + A ++ M V D +L ++ A L +G+ +H+
Sbjct: 215 WNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIK 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G+E E+ I++YSK G E RKVFDE + + SWN++I G + G EA+
Sbjct: 275 VSGMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALS 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++ ++ +PD+VTM+ + SAC S GDL +Q++ Y+ + T++ N+LIDM
Sbjct: 335 LWNVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYI-ESSDHLSGSTVLCNALIDM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG MD A VF ++ + +V SWTS+IVGYA NG EAL F M I PN VTF
Sbjct: 394 YAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTF 453
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G V +GK+ +++M Y IEP+ H GCMVD+ RAG+LEEA V+ MP
Sbjct: 454 LGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMP 513
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP-WSDGAYVVLSNIYASRGLWEEVE 447
++ N V+W L+ AC G+ +G + L +++ +V+ SNI+A G W++V
Sbjct: 514 VEPNAVVWRMLINACRVHGDFNLGLNLVSGLIDVKTEHGPEDHVISSNIFAEAGRWDDVL 573
Query: 448 RIRAVMKHRNLAKIPAYS 465
+ R++M + K+P S
Sbjct: 574 QERSLMVAQKAVKLPGKS 591
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 146/287 (50%), Gaps = 9/287 (3%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR 176
V P+ TL I++ + IG LHS + L+ + I LY++ + A
Sbjct: 142 VKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMDAAA 201
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
K+F E R L SWN +IAG +++ + A +F ++ E D V++VS+ SAC +
Sbjct: 202 KLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACTNXR 261
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLN---SLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
DL + VH ++ K +M++ +LI+MY KCG ++L KVF E+ N++SW
Sbjct: 262 DLHMGKAVHAFI-----KVSGMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASW 316
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
SMI GY G EAL ++ ++ I+P+ VT +G++SAC G + +G +++
Sbjct: 317 NSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYIES 376
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ ++D+ + G ++ A + MP + +V+ W ++
Sbjct: 377 SDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMP-RRDVISWTSII 422
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 24/336 (7%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA----GVLPDCYTLPIVLKASCQLFALEIGRQLH 144
W +IR + P A+ + + R L D + ++KA +L A+ GR +H
Sbjct: 4 WLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGRSIH 63
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEK----ARKVFDENPERKLGSWNAIIAGLSQD 200
+R GL+ N + + LYS A EK A +FD+ PE+ + + N +I+G ++
Sbjct: 64 CHVLRFGLDYNVNVLNALVYLYSSA---EKSMGCACALFDKIPEKTIVTVNCMISGFVKN 120
Query: 201 GRAKEAIDMFIGLKKCGFE----PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
R + +F + GF+ P+ VT+V + S C G + +H Y + K
Sbjct: 121 KRFHAGVGLFNRVLGGGFDLRVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLK 180
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
++ + N+LI +Y + MD A K+F E + ++ SW +MI GYA N A F M
Sbjct: 181 NE--VRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREM 238
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
R + + V+ V ++SAC + + GK +K V +E ++++ + G
Sbjct: 239 RIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIK-VSGMEMMIHFETALINMYSKCGS 297
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+E R + + + N+ W ++ +G V+ G
Sbjct: 298 IELGRKVFDELA-DENIASWNSMI-----YGYVECG 327
>gi|449436862|ref|XP_004136211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
gi|449508034|ref|XP_004163198.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Cucumis sativus]
Length = 606
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 246/459 (53%), Gaps = 13/459 (2%)
Query: 12 SLRMKSSHPL-LHRLCKT-HTFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLN 68
+L+ K L L + CK+ F++ HV I FLD+ + + LS ++
Sbjct: 27 NLKQKEQEYLCLVKKCKSLEEFKQVHVQILKFGLFLDSFCSSSVLATCALSDWNSMDYAC 86
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
I+ + F +N +IR Y + A+ +Y M + V PD +T P+VL
Sbjct: 87 SIFQQL-------DEPTTFDFNTMIRGYVNNMNFENAIYLYNDMLQREVEPDNFTYPVVL 139
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
KA +L ++ G Q+H +LGLE + + ++ I++Y K D E + +F ++ +
Sbjct: 140 KACARLAVIQEGMQIHGHVFKLGLEDDVYVQNSLINMYGKCRDIEMSCAIFRRMEQKSVA 199
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW+AIIA + E + +F + + G + ++ +V+V SAC LG L H
Sbjct: 200 SWSAIIAAHASLAMWWECLALFEDMSREGCWRAEESILVNVLSACTHLGAFHLGRCAHGS 259
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ +K+ + + ++ SL+DMY KCG + +F + + N S++ +I G +G
Sbjct: 260 L--LKNITELNVAVMTSLMDMYVKCGSLQKGLCLFQNMTRKNQLSYSVIISGLGLHGYGR 317
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+AL F M E G+ P+ VT+V VLSAC H G V EG F+ MK Y+IEP HYGCM
Sbjct: 318 QALQIFSEMVEEGLEPDDVTYVSVLSACSHSGLVDEGLDLFDKMKFEYRIEPTMQHYGCM 377
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDL GRAGLLEEA +V+ MP+KAN V+W L+ AC+ N+K+GE A++L L +
Sbjct: 378 VDLKGRAGLLEEAFQLVQSMPIKANDVLWRSLLSACKVHDNLKLGEIAAENLFRLSSHNP 437
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
Y+VLSN+YA WE +IR M +R L + P YSL
Sbjct: 438 SDYLVLSNMYARAQQWENAAKIRTKMINRGLIQTPGYSL 476
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 228/411 (55%), Gaps = 10/411 (2%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T KC ++ +++ + TH + SY N +I Y LE KA+ ++ +M A
Sbjct: 692 TMYGKCNSMEDAEKVF-QSMPTHDIVSY------NVLIGGYAVLEDGTKAMQVFSWMRSA 744
Query: 116 GVLPDCYTLPIVLKASCQLFAL-EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ P+ T+ + + L GR LH+ +R G S+E+ + I++Y+K G+ E
Sbjct: 745 GIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 804
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+ +F+ + + SWNAIIA Q G +EA+ +FI ++ G + D V + S+C S
Sbjct: 805 STNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCAS 864
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L LE +Q+H +KS SD+ ++N+ +DMYGKCG+MD +V + W
Sbjct: 865 LASLEEGMQLHG--LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWN 922
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
++I GYA G EA + F M +G +P++VTFV +LSAC H G V +G ++ M +
Sbjct: 923 TLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASS 982
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ + P H C+VDLLGR G EA +E MP+ N +IW L+ + N+++G
Sbjct: 983 FGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRK 1042
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
AK L EL+P+ D AYV+LSN+YA+ W +V+++R+ MK N+ K PA S
Sbjct: 1043 TAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACS 1093
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 18/329 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I +Y+ K ++ M G+ PD TL ++ G +HSL +
Sbjct: 516 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 575
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L+S+ + +++YS AG A +F R L SWN +I+ Q+ + +A+
Sbjct: 576 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 635
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
L P+ +T S AC S G L VH V Q+ ++ + L+ NSLI M
Sbjct: 636 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQR--NLLVGNSLITM 693
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC M+ A KVF + ++ S+ +I GYA +A+ F +MR +GI+PN++T
Sbjct: 694 YGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 753
Query: 329 VGVLSACVHGGKVQEGK-HFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAM 383
+ +HG H + + Y I F ++ + + G LE + +
Sbjct: 754 IN-----IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 808
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ K N+V W ++ A NV++G
Sbjct: 809 FNSITNK-NIVSWNAIIAA-----NVQLG 831
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 9/318 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA----LEIGRQLH 144
W + R + KA ++ M GV + L ++ A C+ + G +H
Sbjct: 311 WYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTA-CERRGRDEGIACGAAIH 369
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+L R GL N + + + LY G A+++F E PER + SW A++ LS +G +
Sbjct: 370 ALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLE 429
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ + +++ G + +V S CGSL + LQV V + S ++ + NS
Sbjct: 430 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQV--IVSGLQNQVSVANS 487
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LI M+G GR+ A K+F +++ + SW +MI Y+ G+ ++ F MR G+RP+
Sbjct: 488 LITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPD 547
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T ++S C G + ++ +V++ AG L +A +
Sbjct: 548 ATTLCSLMSVCASSDHFSHGSGIHSLCLRS-SLDSSVTVINALVNMYSAAGKLSDAEFLF 606
Query: 385 EGMPMKANVVIWGCLMGA 402
M + +++ W ++ +
Sbjct: 607 WNMSRR-DLISWNTMISS 623
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 16/275 (5%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK---VFDENPERKLGSWNAIIAGLSQ 199
+H LAVRL L + F + ++ Y + D A +FDE +R +W ++G +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG-DLELALQVHKYVFQVKSKQKSD 258
G +A +M G+++ G + S+ +AC G D +A + ++ +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ +L+ +YG G + A ++FWE+ + NV SWT+++V ++NG EAL + MR
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY--QIEPRFAHYGCMVDLLGRAGL 376
G+ N F V+S C G ++ ++ V ++ + + ++ + G G
Sbjct: 441 DGVPCNANAFATVVSLC---GSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGR 497
Query: 377 LEEARAMVEGMPMKANVVIWGCLM------GACEK 405
+ +A + + M + + + W ++ G C K
Sbjct: 498 VHDAEKLFDRME-EHDTISWNAMISMYSHQGICSK 531
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK---VFDENPERKLGSWNAIIAGLSQ 199
+H LAVRL L + F + ++ Y + D A +FDE +R +W ++G +
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
GR A +M G+++ G + S+ +AC G E
Sbjct: 98 CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDE 137
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 207/382 (54%), Gaps = 7/382 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL +Y M G D +TL VL A L L GRQ H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFE---KARKVFDENPERKLGSWNAIIAGLSQDGR-AK 204
+ G N SG I YSK G + + KVF E L WN +I+G S + ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN- 263
EA+ F +++ G PDD + V VTSAC +L Q+H +KS S+ + +N
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG--LAIKSHIPSNRISVNN 385
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+LI +Y K G + A VF + + N S+ MI GYA +G EAL + M +SGI P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N +TFV VLSAC H GKV EG+ +F MK ++IEP HY CM+DLLGRAG LEEA
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MP K V W L+GAC K N+ + E A L ++P + YV+L+N+YA W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKW 565
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
EE+ +R M+ + + K P S
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCS 587
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 10/325 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I Y A+ ++ M + G D +TL ++ A C +++ +QLH +V
Sbjct: 108 YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSV 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
G +S + F++ YSK G +A VF E R SWN++I Q +A+
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + GF+ D T+ SV +A SL L Q H + + Q S + + LID
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH--VGSGLID 283
Query: 268 MYGKCGRMDLAY---KVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIRP 323
Y KCG D Y KVF EI P++ W +MI GY+ N L+ EA+ F M+ G RP
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ +FV V SAC + + K + + R + ++ L ++G L++AR +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 384 VEGMPMKANVVIWGCLMGACEKFGN 408
+ MP + N V + C++ + G+
Sbjct: 404 FDRMP-ELNAVSFNCMIKGYAQHGH 427
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR-------------------- 176
L G+ LH+L V+ + S+ + + F++LYSK G AR
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 177 -----------KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
++FDE P+ S+N +I+G + A+ +F ++K GFE D T+
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+ +AC ++L Q+H F V S + + N+ + Y K G + A VF+ +
Sbjct: 144 SGLIAAC--CDRVDLIKQLH--CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 286 DQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
D+ + SW SMIV Y + +AL + M G + + T VL+A + G
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 345 KHF 347
+ F
Sbjct: 260 RQF 262
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 45/197 (22%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW--------------------------- 283
VKS S T + N +++Y KCGR+ A F+
Sbjct: 35 VKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIAR 94
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
EI QP+ S+ ++I GYA A+ F MR+ G + T G+++AC
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ + H F + F Y V + GLL EA ++ GM + V
Sbjct: 155 DLIKQLHCF-------SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 396 WGCLMGACEKFGNVKMG 412
W ++ A +G K G
Sbjct: 208 WNSMIVA---YGQHKEG 221
>gi|297737392|emb|CBI26593.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 219/381 (57%), Gaps = 22/381 (5%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
AF WN+II+ + +ALD Y +M + LP+ +T+P+++ + +L + GR +H
Sbjct: 98 AFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHG 157
Query: 146 LAVRLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
L +LGL S N+ ++ +S+Y K G + A K F E+ +WN + + +D
Sbjct: 158 LVSKLGLFSGNQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMFS-FCED---- 212
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+P+ T+VSV SAC L LE +VH Y+ K + + + +
Sbjct: 213 -------------LKPNSATLVSVLSACSHLASLEEGEKVHNYI--NGGKFEFNLSIATA 257
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG+++ + ++F + + +V +W MI GY +G A A++ F M ES +PN
Sbjct: 258 LIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPN 317
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+ VLSAC H G V+EGK+ F M++ Y + P HY CMVDLLGR+G L+EA A+V
Sbjct: 318 GLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALV 376
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MP+ + +WG L+ +C+ ++MG +AKH + + +DG YV++SN+Y+S G WE
Sbjct: 377 LSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWE 436
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E E+ R +MK R + K +S
Sbjct: 437 EAEKARGIMKERGVRKKTGWS 457
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
S Q+ +L+ Q H+ + G +N F S ISLY+ + ++FDE P R W
Sbjct: 42 SNQISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLW 101
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
N+II +G A+D + ++ P+ T+ + ++C L + +H V +
Sbjct: 102 NSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSK 161
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ + ++ N+L+ MY K G + LA K F +++ N +W M
Sbjct: 162 L-GLFSGNQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLM-------------- 206
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F + + ++PN T V VLSAC H ++EG+ + N + E + ++D+
Sbjct: 207 --FSFCED--LKPNSATLVSVLSACSHLASLEEGEKVHNYI-NGGKFEFNLSIATALIDM 261
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-A 429
+ G LE++R + M + +V+ W ++ G+ + + ++E +G
Sbjct: 262 YAKCGQLEKSREIFNSMHER-DVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLT 320
Query: 430 YVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
++ + + A GL +E + + M+ ++A
Sbjct: 321 FLAVLSACAHAGLVKEGKYLFGKMQDYSVA 350
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 218/408 (53%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N I+ Y R ++ L + M + G PD T+ + A +L + G+ H +
Sbjct: 309 YNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVL 368
Query: 149 RLGLESNEFCESGFISLYSKAG-------------------------------DFEKARK 177
R GLE + + I++Y K G D E A K
Sbjct: 369 RNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWK 428
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F P+ L SWN +I L Q+ KEAI++F ++ G D VTMV V SACG LG
Sbjct: 429 IFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGA 488
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+LA +H Y+ K D + +L+DM+ +CG A +VF ++ + +VS+WT+ I
Sbjct: 489 LDLAKWIHGYI--KKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAI 546
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A G A++ F M + GI+P+ V FV +L+A HGG V++G H F MK++Y I
Sbjct: 547 GAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGI 606
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HYGCMVDLLGRAGLL EA +++ M M+ N VIWG L+ AC NV + + A+
Sbjct: 607 APQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAE 666
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL+P G +V+LSNIYAS G W++V ++R +K + K+P S
Sbjct: 667 RISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSS 714
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 145/259 (55%), Gaps = 2/259 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ ++++IR ++ KA+ ++ + G +PD +T P VL A + AL G Q+H
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V++G E + F E+ I Y + G+ + R+VFD+ ER + SW ++I G ++ G KEA
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEA 224
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + + G P+ VTMV V SAC L DL+L QV + ++ + + + LM+N+L+
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGEL--ELEVNALMVNALV 282
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG +D A K+F E N+ + +++ Y GLA E L M + G RP+ +
Sbjct: 283 DMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRI 342
Query: 327 TFVGVLSACVHGGKVQEGK 345
T + +SAC V GK
Sbjct: 343 TMLSAVSACSELDDVSCGK 361
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 41/354 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + K+A+ ++ M G+ P+ T+ V+ A +L L++G Q+ +
Sbjct: 208 WTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L LE N + + +Y K G +KARK+FDE ++ L +N I++ + G A+E +
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLA 327
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + K G PD +TM+S SAC L D+ H YV + + D + N++I+M
Sbjct: 328 VLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLR-NGLEGWDNV-CNAIINM 385
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG------------------------ 304
Y KCG+ ++A +VF + SW S+I G+ NG
Sbjct: 386 YMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMI 445
Query: 305 -------LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
+ EA++ F M+ GI + VT VGV SAC + G + K H + K+++
Sbjct: 446 GALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIH 505
Query: 356 QIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
H G +VD+ R G + A + M +K +V W +GA GN
Sbjct: 506 ----FDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 36/201 (17%)
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKV 341
++S+I G++A GL +A+ F + G P++ TF VLSAC VHG V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166
Query: 342 QEG-----------KHFF------EMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARA 382
+ G HF+ + M+ V+ E + ++ + G +EA +
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226
Query: 383 ----MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV-VLSNIY 437
MVE + ++ N V ++ AC K ++++GE V + ELE + V L ++Y
Sbjct: 227 LFFEMVE-VGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMY 285
Query: 438 ASRGLWEEVERIRAVMKHRNL 458
G ++ +I +NL
Sbjct: 286 MKCGAIDKARKIFDECVDKNL 306
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 10/415 (2%)
Query: 47 HEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
+E A +KC +L +++ H IR+ ++S WN +I + + P+ +L
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVF-HGIRSKTVNS------WNALIGGHAQSNDPRLSL 481
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
D ++ M +G+LPD +T+ +L A +L +L +G+++H +R LE + F +SLY
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
G+ + +FD ++ L SWN +I G Q+G A+ +F + G + ++M+
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V AC L L L + H Y +K + D + SLIDMY K G + + KVF +
Sbjct: 602 PVFGACSLLPSLRLGREAHAYA--LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ + +SW +MI+GY +GLA EA+ F M+ +G P+ +TF+GVL+AC H G + EG
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 719
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEK 405
+ + MK+ + ++P HY C++D+LGRAG L++A R + E M +A+V IW L+ +C
Sbjct: 720 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 779
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
N++MGE VA L ELEP YV+LSN+YA G WE+V ++R M +L K
Sbjct: 780 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 23/329 (6%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +I Y+R E + L+ +I M S +LPD +T P V+KA + + IG +H
Sbjct: 152 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L V+ GL + F + +S Y G A ++FD PER L SWN++I S +G ++E
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 206 AI----DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ +M F PD T+V+V C ++ L VH + VK + + ++
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA--VKLRLDKELVL 329
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG- 320
N+L+DMY KCG + A +F + NV SW +M+ G++A G + D M G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 321 -IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV--YQIEPRFAHY----GCMVDLLGR 373
++ + VT + + C H + F +K + Y ++ F + V +
Sbjct: 390 DVKADEVTILNAVPVCFH-------ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G L A+ + G+ K V W L+G
Sbjct: 443 CGSLSYAQRVFHGIRSKT-VNSWNALIGG 470
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH +++ NE + F++ Y+K G A++VF + + SWNA+I G +Q
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ ++D + +K G PD T+ S+ SAC L L L +VH ++ +++ + D
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI--IRNWLERDLF 532
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ S++ +Y CG + +F ++ ++ SW ++I GY NG + AL F M G
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLL 377
I+ ++ + V AC ++ G+ H + +K++ + + A C ++D+ + G +
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYA-LKHLLEDD---AFIACSLIDMYAKNGSI 648
Query: 378 EEARAMVEGMPMKANVVIWGCLMG 401
++ + G+ K+ +MG
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMG 672
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 124 LPIVLKASCQLFALEIGRQLHSLAV-RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
L ++L+AS + +E+GR++H L L +++ + I++Y+ G + +R VFD
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELA 241
+ L WNA+I+ S++ E ++ FI + PD T V AC + D+ +
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
L VH V VK+ D + N+L+ YG G + A ++F + + N+ SW SMI ++
Sbjct: 207 LAVHGLV--VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 302 ANGLANEALDCF-HYMRESG---IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
NG + E+ M E+G P+ T V VL C ++ GK + ++
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RL 323
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ ++D+ + G + A+ M+ M NVV W ++G G+
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 209/378 (55%), Gaps = 4/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF-ALEIGRQLHSLA 147
W +I Y R ++ +++ M V P+ T+ + L SC A+++G++LH+
Sbjct: 200 WTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITM-LSLIISCGFVGAVQLGKRLHAYI 258
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+R G + + + +Y K G+ AR +FD + + +W A+I+ +Q A
Sbjct: 259 LRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAF 318
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F+ ++ G P+++TMVS+ S C G L++ H Y+ K + D ++ +LID
Sbjct: 319 QLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYI--DKQGVEVDVILKTALID 376
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG + A ++F E ++ +W M+ GY +G +AL F M G++PN +T
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+G L AC H G V EGK FE M + + + P+ HYGCMVDLLGRAGLL+EA M+E M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+ N+ IWG ++ AC+ N MGE A+ L LEP + G V++SNIYA+ W +V
Sbjct: 497 PVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVA 556
Query: 448 RIRAVMKHRNLAKIPAYS 465
+R +K + K P S
Sbjct: 557 GMRKAVKDTGIKKEPGMS 574
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 202/426 (47%), Gaps = 48/426 (11%)
Query: 30 TFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTN--------LLQLNQIYAHIIRTHML 80
TF+K I S+F T ++P+ + K + L Q Q++AHI RTH
Sbjct: 17 TFQKLKQPIPPPSTFTKTPQNPSPQHQNKHQKHPSFTPNNHLCLDQTQQLHAHITRTHFN 76
Query: 81 HSYSAAFHWNNIIRLYTRLEA-PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
H+ +F + E+ P+ AL+ Y +M + + D + +P VLKA Q+ +
Sbjct: 77 HAQQVSF---------SPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARM 127
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE--------------- 184
G+++H +V+ GL S+ F + + +YS+ G AR +FD+ E
Sbjct: 128 GKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT 187
Query: 185 -------RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
R + SW A+IAG + +E +F+ + + P+D+TM+S+ +CG +G
Sbjct: 188 LFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGA 247
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
++L ++H Y+ +++ + +L+DMYGKCG + A +F + +V +WT+MI
Sbjct: 248 VQLGKRLHAYI--LRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMI 305
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
YA + A F MR++G+RPN +T V +LS C G + GK +F + +
Sbjct: 306 SAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK-WFHAYIDKQGV 364
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
E ++D+ + G + A+ + + ++ W +M +G GE K
Sbjct: 365 EVDVILKTALIDMYAKCGDISGAQRLFSE-AIDRDICTWNVMMAG---YGMHGYGEKALK 420
Query: 418 HLQELE 423
E+E
Sbjct: 421 LFTEME 426
>gi|297846320|ref|XP_002891041.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336883|gb|EFH67300.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 586
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 228/408 (55%), Gaps = 29/408 (7%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIV----LKASCQL 134
LH+ S+AF + RL P+ IY + + L ++ P+V K+ L
Sbjct: 104 LHA-SSAF---SFFRLMVNRSFPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 135 FALEIGRQLHSLAVRLG------------LESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+ + LHS A + E N + +S Y+++GD A +F+E
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDIFNAVALFEEM 219
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLEL 240
PER + SWNAI+A +Q+G EA+ +F + C P++VT+V V SAC G L+L
Sbjct: 220 PERDVPSWNAILAACTQNGLFVEAVSLFRRMINDPC-IRPNEVTLVCVLSACAQTGTLQL 278
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
A +H + + + SD + NSL+D+YGKCG ++ A VF + ++++W SMI +
Sbjct: 279 AKGIHAFAY--RRNLSSDVFVSNSLVDLYGKCGNLEEASSVFKMSSKKSLTAWNSMINCF 336
Query: 301 AANGLANEALDCFHYM---RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
A +G + EA+ F M I+P+H+TF+G+L+AC HGG V +G+ +F++MK + I
Sbjct: 337 ALHGRSEEAIAVFEDMMKLNSHDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMKKRFGI 396
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EPR HYGC++DLLGRAG +EA + M M+A+ IWG L+ AC+K+G++ + E K
Sbjct: 397 EPRIEHYGCLIDLLGRAGQFDEALETMSTMKMEADEAIWGSLLNACKKYGHLDLAEVAVK 456
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+L L P + G +++N+Y G WEE R R ++KH+N K P +S
Sbjct: 457 NLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 206/375 (54%), Gaps = 2/375 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A W ++ YT+ + + AL+++ M+ GV D + IVLK C L ++G+Q+HS
Sbjct: 254 AVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHS 313
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+LG ES + + Y K GD E A + F E SW+A+I+G SQ GR ++
Sbjct: 314 HIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLED 373
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
I +F L+ G + SV AC + +L + Q H +K S +++
Sbjct: 374 CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDA--IKRGLVSYLYGESAM 431
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCGR+D A + F ID+P+ +WT++I GYA +G A EAL F M+ G+RPN
Sbjct: 432 VTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNA 491
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF+ VL+AC H G V E K + M Y ++P HY CM+D RAGLL EA ++
Sbjct: 492 VTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELIN 551
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP + + + W L+G C ++K+G+ A++L L+P Y++L N+Y++ G WEE
Sbjct: 552 RMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEE 611
Query: 446 VERIRAVMKHRNLAK 460
+R +M R L K
Sbjct: 612 AGHVRKLMAERELKK 626
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 162/352 (46%), Gaps = 19/352 (5%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C + + + +++ ++ +++ W +I Y + +KA+ ++ M +G+ P+
Sbjct: 135 CGSXIDVQKVFDEMLMKNLVS-------WVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
+L++ LE+G+Q+HS +R L +N E+ ++Y + G E A+ VFD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ +W ++ G +Q + + A+++F + G E D+ V C L D ++
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
Q+H ++ VK +S+ + L+D Y KCG ++ AY+ F I +PN SW+++I G+
Sbjct: 308 GKQIHSHI--VKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGF 365
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+ +G + + F +R G+ N + V AC + G + I+
Sbjct: 366 SQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQ-----AHGDAIKRG 420
Query: 361 FAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
Y MV + + G L+ AR E + + + V W ++ GN
Sbjct: 421 LVSYLYGESAMVTMYSKCGRLDYARRAFESID-EPDAVAWTAIISGYAYHGN 471
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 4/308 (1%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
K+A D M A V ++ + +A +L +L GR +H R + E+
Sbjct: 69 KEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCL 128
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ +Y G +KVFDE + L SW +I+ +++G ++AI +F ++ G P+
Sbjct: 129 LRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNS 188
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
+S+ +C LEL Q+H +V ++++ ++ + ++ +MY +CG ++ A VF
Sbjct: 189 AVYMSLLQSCLGPSFLELGKQMHSHV--IRAQLNANITVETAICNMYVRCGWLEGAKLVF 246
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+D N +WT ++VGY AL+ F M G+ + F VL C
Sbjct: 247 DGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWD 306
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
GK + + E + +VD + G +E A G + N V W L+
Sbjct: 307 MGKQIHSHIVKL-GXESEVSVGTPLVDFYVKCGDIESAYRSF-GRISEPNDVSWSALISG 364
Query: 403 CEKFGNVK 410
+ G ++
Sbjct: 365 FSQSGRLE 372
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 10/415 (2%)
Query: 47 HEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
+E A +KC +L +++ H IR+ ++S WN +I + + P+ +L
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVF-HGIRSKTVNS------WNALIGGHAQSNDPRLSL 231
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
D ++ M +G+LPD +T+ +L A +L +L +G+++H +R LE + F +SLY
Sbjct: 232 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 291
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
G+ + +FD ++ L SWN +I G Q+G A+ +F + G + ++M+
Sbjct: 292 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 351
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V AC L L L + H Y +K + D + SLIDMY K G + + KVF +
Sbjct: 352 PVFGACSLLPSLRLGREAHAYA--LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 409
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ + +SW +MI+GY +GLA EA+ F M+ +G P+ +TF+GVL+AC H G + EG
Sbjct: 410 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 469
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEK 405
+ + MK+ + ++P HY C++D+LGRAG L++A R + E M +A+V IW L+ +C
Sbjct: 470 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 529
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
N++MGE VA L ELEP YV+LSN+YA G WE+V ++R M +L K
Sbjct: 530 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 584
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 182/419 (43%), Gaps = 58/419 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM----SRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
WN++IR+++ +++ + M +PD TL VL + + +G+ +H
Sbjct: 6 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
AV+L L+ + + +YSK G A+ +F N + + SWN ++ G S +G
Sbjct: 66 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125
Query: 205 EAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
D+ + G + D+VT+++ C L ++H Y +K + + L+
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY--SLKQEFVYNELVA 183
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+ + Y KCG + A +VF I V+SW ++I G+A + +LD M+ SG+
Sbjct: 184 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243
Query: 323 PNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ T +LSAC ++ GK H F +++N +E Y ++ L G L
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGF-IIRN--WLERDLFVYLSVLSLYIHCGELCTV 300
Query: 381 RAMVEGMPMKA----NVVIWGCL------------------------------MGACEKF 406
+A+ + M K+ N VI G L GAC
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 360
Query: 407 GNVKMGE----WVAKHLQELEPWSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
++++G + KHL E D A++ S ++YA G + ++ +K ++ A
Sbjct: 361 PSLRLGREAHAYALKHLLE-----DDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH +++ NE + F++ Y+K G A++VF + + SWNA+I G +Q
Sbjct: 165 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 224
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ ++D + +K G PD T+ S+ SAC L L L +VH ++ +++ + D
Sbjct: 225 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI--IRNWLERDLF 282
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ S++ +Y CG + +F ++ ++ SW ++I GY NG + AL F M G
Sbjct: 283 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 342
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLL 377
I+ ++ + V AC ++ G+ H + +K++ + + A C ++D+ + G +
Sbjct: 343 IQLCGISMMPVFGACSLLPSLRLGREAHAYA-LKHLLEDD---AFIACSLIDMYAKNGSI 398
Query: 378 EEARAMVEGMPMKANVVIWGCLMG 401
++ + G+ K+ +MG
Sbjct: 399 TQSSKVFNGLKEKSTASWNAMIMG 422
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 289 NVSSWTSMIVGYAANGLANEA-LDCFHYMRESG---IRPNHVTFVGVLSACVHGGKVQEG 344
N SW SMI ++ NG + E+ L M E+G P+ T V VL C ++ G
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
K + +++ ++D+ + G + A+ M+ M NVV W ++G
Sbjct: 62 KGVHGWAVKL-RLDKELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFS 119
Query: 405 KFGNV 409
G+
Sbjct: 120 AEGDT 124
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 216/376 (57%), Gaps = 2/376 (0%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
+ +I Y + A+ ++ ++ G+ P+ + L A + A+ IG++LH ++
Sbjct: 419 STMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLK 478
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
E + ES + +YSK G + + +F + + +WN++I+ +Q+G +EA+D+
Sbjct: 479 NAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDL 538
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G + ++VT+ S+ SAC L + ++H + +K ++D ++LIDMY
Sbjct: 539 FRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGII--IKGPIRADLFAESALIDMY 596
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
GKCG ++LA +VF + + N SW S+I Y A+GL E++D M+E G + +HVTF+
Sbjct: 597 GKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFL 656
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
++SAC H G+VQEG F M Y IEP+ H CMVDL RAG L++A + MP
Sbjct: 657 ALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPF 716
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERI 449
K + IWG L+ AC NV++ E ++ L +L+P + G YV++SNI A G W+ V ++
Sbjct: 717 KPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKM 776
Query: 450 RAVMKHRNLAKIPAYS 465
R +MK + + KIP YS
Sbjct: 777 RRLMKDKKVQKIPGYS 792
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 4/261 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +IR +T + A+ Y+ M + PD +TLP V+K+ L AL +GR +H
Sbjct: 113 WNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRT 172
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
LGL+ + + S I +Y+ AG + AR+VFD ER WN ++ G + G A
Sbjct: 173 TRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASA 232
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F ++ G +P+ T+ S C + DL +Q+H VK + + + N+L+
Sbjct: 233 VGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLH--TLAVKYGLEPEVAVANTLV 290
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY KC ++ A+++F + + ++ +W MI G NGL ++AL F M++SG++P+ V
Sbjct: 291 SMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSV 350
Query: 327 TFVGVLSACVHGGKVQEGKHF 347
T +L A ++GK
Sbjct: 351 TLASLLPALTELNGFKQGKEI 371
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + A+ ++ M +G P+ TL L L G QLH+LAV
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLE + +S+Y+K E+A ++F P L +WN +I+G Q+G +A+
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G +PD VT+ S+ A L + ++H Y+ V++ D ++++L+D+
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYI--VRNCAHVDVFLVSALVDI 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + +A VF +V ++MI GY N ++ A+ F Y+ GI+PN V
Sbjct: 394 YFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453
Query: 329 VGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
L AC ++ G+ ++KN Y E R ++D+ + G L+ + M M
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAY--EGRCYVESALMDMYSKCGRLDLSHYMFSKM 511
Query: 388 PMKANVVIWGCLMGACEKFG 407
K + V W ++ + + G
Sbjct: 512 SAK-DEVTWNSMISSFAQNG 530
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 119/210 (56%), Gaps = 2/210 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + + P++ALD++ M GV + T+ +L A L A+ G+++H + +
Sbjct: 519 WNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIII 578
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + ++ F ES I +Y K G+ E A +VF+ PE+ SWN+II+ G KE++D
Sbjct: 579 KGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVD 638
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ +++ GF+ D VT +++ SAC G ++ L++ + + + + + L+ ++D+
Sbjct: 639 LLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTE-EYHIEPQVEHLSCMVDL 697
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
Y + G++D A + ++ +P+ W +++
Sbjct: 698 YSRAGKLDKAMQFIADMPFKPDAGIWGALL 727
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 201/336 (59%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+H
Sbjct: 188 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 247
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A +F+ + + SWN +I G + KEA+
Sbjct: 248 DHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALL 307
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + +L SLIDM
Sbjct: 308 LFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + ++SSW +MI G+A +G AN A D F MR++GI P+ +TF
Sbjct: 368 YAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y+I P+ HYGCM+DLLG GL +EA+ M+ MP
Sbjct: 428 VGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP 487
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
M+ + VIW L+ AC+ NV++GE A++L ++EP
Sbjct: 488 MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 523
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 177/349 (50%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+CYT P +LK+ + A G+Q+H +
Sbjct: 56 WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-------------------------- 182
+LG + + + + IS+Y + G E ARKVFD++
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQK 175
Query: 183 -----PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
P + + SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 176 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 235
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 236 IELGRQVHLWIDD--HGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLI 293
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 294 GGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVY-INKRLK 352
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A+ + + M ++ N +I+G M
Sbjct: 353 GVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 401
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 10/222 (4%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
SY WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 282 SYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGR 341
Query: 142 QLHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+H + RL G+ + + I +Y+K GD E A++VFD R L SWNA+I G +
Sbjct: 342 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 401
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G+A A D+F ++K G +PDD+T V + SAC G L+L +++F+ S+ T
Sbjct: 402 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLG----RHIFRSMSQDYKIT 457
Query: 260 LML---NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
L +ID+ G CG A ++ + +P+ W S++
Sbjct: 458 PKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 499
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 156/391 (39%), Gaps = 76/391 (19%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ ++ GL + + S I + F+ A VF+ E L WN + G
Sbjct: 4 RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGH 63
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T + +C Q+H +V +K
Sbjct: 64 ALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHV--LKLGYDL 121
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFW-------------------------------EID 286
D + SLI MY + GR++ A KVF EI
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIP 181
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC G ++ G+
Sbjct: 182 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 241
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG----- 401
+ + + ++DL + G +E A + EG+ K +V+ W L+G
Sbjct: 242 VHLWIDD-HGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHM 299
Query: 402 ------------------------------ACEKFGNVKMGEWVAKHL-QELEPWSDGAY 430
AC G + +G W+ ++ + L+ ++ +
Sbjct: 300 NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASS 359
Query: 431 VVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
++ S ++YA G E +++ M R+L+
Sbjct: 360 LLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 390
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 232/411 (56%), Gaps = 10/411 (2%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
A +KC +L +++ H IR+ ++S WN +I + + P+ +LD ++
Sbjct: 788 ANAFVASYAKCGSLSYAQRVF-HGIRSKTVNS------WNALIGGHAQSNDPRLSLDAHL 840
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M +G+LPD +T+ +L A +L +L +G+++H +R LE + F +SLY G
Sbjct: 841 QMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCG 900
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ + +FD ++ L SWN +I G Q+G A+ +F + G + ++M+ V
Sbjct: 901 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 960
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC L L L + H Y +K + D + SLIDMY K G + + KVF + + +
Sbjct: 961 ACSLLPSLRLGREAHAYA--LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 1018
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
+SW +MI+GY +GLA EA+ F M+ +G P+ +TF+GVL+AC H G + EG + +
Sbjct: 1019 ASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQ 1078
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEKFGNV 409
MK+ + ++P HY C++D+LGRAG L++A R + E M +A+V IW L+ +C N+
Sbjct: 1079 MKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNL 1138
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+MGE VA L ELEP YV+LSN+YA G WE+V ++R M +L K
Sbjct: 1139 EMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 1189
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 163/347 (46%), Gaps = 25/347 (7%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +I Y+R E + L+ +I M S +LPD +T P V+KA + + IG +H
Sbjct: 507 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 566
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L V+ GL + F + +S Y G A ++FD PER L SWN++I S +G ++E
Sbjct: 567 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 626
Query: 206 AI----DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ +M F PD T+V+V C ++ L VH + VK + + ++
Sbjct: 627 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA--VKLRLDKELVL 684
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG- 320
N+L+DMY KCG + A +F + NV SW +M+ G++A G + D M G
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 744
Query: 321 -IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV--YQIEPRFAHY----GCMVDLLGR 373
++ + VT + + C H + F +K + Y ++ F + V +
Sbjct: 745 DVKADEVTILNAVPVCFH-------ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 797
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
G L A+ + G+ K V W L+G + + ++ + HLQ
Sbjct: 798 CGSLSYAQRVFHGIRSKT-VNSWNALIGGHAQSNDPRLS--LDAHLQ 841
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH +++ NE + F++ Y+K G A++VF + + SWNA+I G +Q
Sbjct: 770 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 829
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ ++D + +K G PD T+ S+ SAC L L L +VH ++ +++ + D
Sbjct: 830 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI--IRNWLERDLF 887
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ S++ +Y CG + +F ++ ++ SW ++I GY NG + AL F M G
Sbjct: 888 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 947
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLL 377
I+ ++ + V AC ++ G+ H + +K++ + + A C ++D+ + G +
Sbjct: 948 IQLCGISMMPVFGACSLLPSLRLGREAHAY-ALKHLLEDD---AFIACSLIDMYAKNGSI 1003
Query: 378 EEARAMVEGMPMKANVVIWGCLMG 401
++ + G+ K+ +MG
Sbjct: 1004 TQSSKVFNGLKEKSTASWNAMIMG 1027
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
Query: 124 LPIVLKASCQLFALEIGRQLHSLAV-RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
L ++L+AS + +E+GR++H L L +++ + I++Y+ G + +R VFD
Sbjct: 442 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 501
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELA 241
+ L WNA+I+ S++ E ++ FI + PD T V AC + D+ +
Sbjct: 502 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 561
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
L VH V VK+ D + N+L+ YG G + A ++F + + N+ SW SMI ++
Sbjct: 562 LAVHGLV--VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 619
Query: 302 ANGLANEA-LDCFHYMRESG---IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
NG + E+ L M E+G P+ T V VL C ++ GK + ++
Sbjct: 620 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RL 678
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ ++D+ + G + A+ M+ M NVV W ++G G+
Sbjct: 679 DKELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDT 729
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 229/381 (60%), Gaps = 7/381 (1%)
Query: 89 WNNIIRLYTR---LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
W ++I Y++ + AL +++ M R G+ P+ + L ++K L + G+Q+H
Sbjct: 160 WTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHG 219
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ G + N F S + +Y++ G+ ++R VFDE + SWNA+I+G ++ G +E
Sbjct: 220 CCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEE 279
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F+ +++ GF + T ++ + + G LE +H ++ +KS +K + N+L
Sbjct: 280 ALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM--MKSGKKLVGYVGNTL 337
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SGIRPN 324
+ MY K G + A KVF + + +V S SM++GYA +GL EA++ F M I PN
Sbjct: 338 LHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPN 397
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+ VL+AC H G + EG ++FE+MK Y +EP+ +HY +VDL GRAGLL++A++ +
Sbjct: 398 DITFLSVLTACSHAGLLDEGLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFI 456
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
E MP++ N IWG L+GA + N +MG + A+ + EL+P+ GA+ +LSNIYAS G W+
Sbjct: 457 EEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWK 516
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
+V ++R MK L K PA S
Sbjct: 517 DVAKVRKEMKDSGLKKEPACS 537
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 121/248 (48%), Gaps = 13/248 (5%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
L + ++ + PD +LK L L+ G+ +H+ + ++ ++ +
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID---MFIGLKKCGFEPD 221
+Y+K G E AR+VFDE + + +W ++I G SQDG A A +F+ + + G P+
Sbjct: 135 MYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPN 194
Query: 222 DVTMVSVTSACGSLGDLELALQVH----KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
+ + S+ CG LG Q+H KY FQ + + +SL+DMY +CG +
Sbjct: 195 EFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQ------ENVFVGSSLVDMYARCGELRE 248
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
+ VF E++ N SW ++I G+A G EAL F M+ G T+ +L +
Sbjct: 249 SRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSST 308
Query: 338 GGKVQEGK 345
G +++GK
Sbjct: 309 TGSLEQGK 316
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 19/199 (9%)
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
EPD + C LG L+ VH ++ + SK ++D ++ NS++ MY KCG +++
Sbjct: 87 LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHL--MNSKFRNDLVIKNSILFMYAKCGSLEI 144
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANE---ALDCFHYMRESGIRPNH------VTF 328
A +VF E+ +V +WTSMI GY+ +G A+ AL F M G+RPN V
Sbjct: 145 ARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKC 204
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G L +CV G ++ + +NV+ +VD+ R G L E+R + + +
Sbjct: 205 CGFLGSCVDGKQIHGCCWKYGFQENVFV-------GSSLVDMYARCGELRESRLVFDELE 257
Query: 389 MKANVVIWGCLMGACEKFG 407
K N V W L+ + G
Sbjct: 258 SK-NEVSWNALISGFARKG 275
>gi|357119550|ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/470 (33%), Positives = 238/470 (50%), Gaps = 66/470 (14%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHML------------HSYSAAFHWNNIIRLYTRLEAPK-- 103
L+ C+ + +++A ++RT +L +Y+A+ + + L R P
Sbjct: 296 LTSCSTARRAAELHAAVLRTGLLDATDRAVAFRLQRAYAASGRLDLSLALLRRTRDPTAI 355
Query: 104 ----------------KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
AL + M G+LP +TL L A C+ L GR LH A
Sbjct: 356 FYTSAIHAHSSRGHRLPALALLSDMLAQGLLPTAHTLSASLPA-CR--GLSPGRALHGYA 412
Query: 148 VRLGLESNEFCESGFISLYSKAGD--------------------------------FEKA 175
+L L + + + + +Y++AGD + A
Sbjct: 413 FKLALAGDSYVATALLGMYARAGDATAARALFDDMLPDPHVVSVTAMLTCYADMGALDDA 472
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R +FD P + WNA+I G +Q GR EA+ +F + G EPD+VT+V V SA L
Sbjct: 473 RSLFDGLPTKDFVCWNAMIDGYTQHGRPNEALRLFRRMLGSGVEPDEVTVVLVLSAVAQL 532
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G +E +H YV + Q S + +LIDMY KCG + A VF I ++ W +
Sbjct: 533 GTVESGKWLHSYVKNSRRVQLS-VRVGTALIDMYCKCGSLGDAVDVFHGIGDKDIVVWNA 591
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI GYA +G + +AL+ F RE G+ P +TF+G+L+AC H G V+EG+ FF+ M+ Y
Sbjct: 592 MINGYAMHGDSRKALEMFVQSREQGLWPTDITFIGLLNACSHSGMVEEGREFFQSMEREY 651
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
I+P+ HYGCMVDLLGRAGL++EA +V+ M + + V+W L+ AC N+ +G+ +
Sbjct: 652 GIDPKIEHYGCMVDLLGRAGLIKEAFCLVQSMKITPDAVMWVSLLAACRLHKNMSLGQQI 711
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A +L + G Y++LSNIYA+ G W EV R+R++MK + K P S
Sbjct: 712 ADYLVAKGLANSGMYILLSNIYAAVGNWGEVARVRSMMKASGIQKEPGCS 761
>gi|242091784|ref|XP_002436382.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
gi|241914605|gb|EER87749.1| hypothetical protein SORBIDRAFT_10g001540 [Sorghum bicolor]
Length = 507
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 196/315 (62%), Gaps = 4/315 (1%)
Query: 154 SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL 213
S+ + +S Y++ G + A +F P+R + SW A+++G +Q+GR +EA+ F+ +
Sbjct: 149 SDAAARNALLSAYARCGRVDDAESLFAGMPDRNVISWTAMVSGYAQNGRHEEAVRTFLEM 208
Query: 214 -KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ CG P++VT+ SV AC ++G L L +V +Y ++ + N+L++MY KC
Sbjct: 209 WEGCGVRPNEVTVSSVLPACAAVGALALGRKVERYA--RGRGMLTNVYVANALVEMYAKC 266
Query: 273 GRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
G + A+ VF I Q ++ SW SMI+ +A +GL E L FH +R +G +P+ +TFVGV
Sbjct: 267 GSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREVLGLFHKLRMTGAKPDGITFVGV 326
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+ AC HGG V EGK F M+ + ++PR HYGCMVDLLGRAGLL+EA +++ MPM+
Sbjct: 327 ILACTHGGLVDEGKLLFNSMREEFGLKPRIEHYGCMVDLLGRAGLLKEADSLIASMPMEP 386
Query: 392 NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRA 451
+ VIWG L+GAC GN+++ E + L LEP + V+LSNIYAS G W+ V ++
Sbjct: 387 DAVIWGALLGACSFHGNLELAEVAVEKLMRLEPQNTANLVILSNIYASHGKWDGVAQVWK 446
Query: 452 VMKHRNLAKIPAYSL 466
++K ++ K YS
Sbjct: 447 LLKEKDHKKSAGYSF 461
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y + ++A+ ++ M GV P+ T+ VL A + AL +GR++ A
Sbjct: 185 WTAMVSGYAQNGRHEEAVRTFLEMWEGCGVRPNEVTVSSVLPACAAVGALALGRKVERYA 244
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEA 206
G+ +N + + + +Y+K G +A VF +R L SWN++I + G +E
Sbjct: 245 RGRGMLTNVYVANALVEMYAKCGSIRRAWMVFRGIGKQRDLCSWNSMIMAFAVHGLWREV 304
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSAC---GSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +F L+ G +PD +T V V AC G + + +L + F +K + + M
Sbjct: 305 LGLFHKLRMTGAKPDGITFVGVILACTHGGLVDEGKLLFNSMREEFGLKPRIEHYGCM-- 362
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+ G+ G + A + + +P+ W +++
Sbjct: 363 --VDLLGRAGLLKEADSLIASMPMEPDAVIWGALL 395
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 223/424 (52%), Gaps = 9/424 (2%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
LD++ + T SK L + +I+ H L WN+++ Y +
Sbjct: 169 LDSYVSVGNALITSYSKNGFLKEARRIF------HWLSEDRDEVSWNSMVVAYMQHREGS 222
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KAL++Y+ M+ G++ D +TL VL A + L G Q H+ ++ G N SG I
Sbjct: 223 KALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLI 282
Query: 164 SLYSKAGD-FEKARKVFDENPERKLGSWNAIIAGLS-QDGRAKEAIDMFIGLKKCGFEPD 221
LYSK G RKVFDE L WN +I+G S + + EA++ F L+ G PD
Sbjct: 283 DLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPD 342
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
D ++V V SAC ++ QVH ++ ++ N+LI MY KCG + A +
Sbjct: 343 DCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVN-NALIAMYSKCGNLRDAKTL 401
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F + + N S+ SMI GYA +G+ ++L F M E P ++TF+ VL+AC H G+V
Sbjct: 402 FDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRV 461
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
++GK +F MMK + IEP H+ CM+DLLGRAG L EA ++E +P W L+G
Sbjct: 462 EDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLG 521
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
AC GNV++ A L +L+P + YV+L+NIY+ G ++ +R +M+ R + K
Sbjct: 522 ACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKK 581
Query: 462 PAYS 465
P S
Sbjct: 582 PGCS 585
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 166/324 (51%), Gaps = 12/324 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG--RQLHSL 146
+N +I Y R + A +++ M A + D +TL ++ A + +G RQLH+L
Sbjct: 108 YNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC----GINVGLIRQLHAL 163
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFD-ENPERKLGSWNAIIAGLSQDGRAKE 205
+V GL+S + I+ YSK G ++AR++F + +R SWN+++ Q +
Sbjct: 164 SVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK 223
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++++ + G D T+ SV +A ++ DL LQ H + +KS ++ + + L
Sbjct: 224 ALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKL--IKSGYHQNSHVGSGL 281
Query: 266 IDMYGKCGRMDL-AYKVFWEIDQPNVSSWTSMIVGYAA-NGLANEALDCFHYMRESGIRP 323
ID+Y KCG L KVF EI P++ W +MI GY+ L++EAL+CF ++ G RP
Sbjct: 282 IDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRP 341
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ + V V+SAC + +G+ + + R + ++ + + G L +A+ +
Sbjct: 342 DDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTL 401
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+ MP + N V + ++ + G
Sbjct: 402 FDTMP-EHNTVSYNSMIAGYAQHG 424
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 125/254 (49%), Gaps = 12/254 (4%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ N F + IS Y+K E A ++FDE P+ S+N +IA ++ G + A +F+
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+++ + D T+ + +ACG ++ L Q+H V + S + N+LI Y K
Sbjct: 131 MREAFLDMDGFTLSGIITACGI--NVGLIRQLH--ALSVVTGLDSYVSVGNALITSYSKN 186
Query: 273 GRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
G + A ++F W + + SW SM+V Y + ++AL+ + M G+ + T V
Sbjct: 187 GFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASV 246
Query: 332 LSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC-MVDLLGR-AGLLEEARAMVEGMP 388
L+A + + G F +++K+ Y + +H G ++DL + G + + R + + +
Sbjct: 247 LTAFTNVQDLLGGLQFHAKLIKSGYH---QNSHVGSGLIDLYSKCGGCMLDCRKVFDEIS 303
Query: 389 MKANVVIWGCLMGA 402
++V+W ++
Sbjct: 304 -NPDLVLWNTMISG 316
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/391 (37%), Positives = 213/391 (54%), Gaps = 32/391 (8%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A+ +Y M +LPD Y + +LKA AL GR++HS A++LGL SN +
Sbjct: 131 AIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIME 190
Query: 165 LYSKAGDFEKARKVFDENPERKLGS------------------------------WNAII 194
LY K G+ AR+VF+E PE + S W A+I
Sbjct: 191 LYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMI 250
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G ++ A++ F G++ P++ T+V V SAC LG LE+ VH Y+ K +
Sbjct: 251 DGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYM--RKFE 308
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ + + N+LI+MY +CG +D A VF E+ +V ++ +MI G + NG + +A++ F
Sbjct: 309 IELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFR 368
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M +RP +VTFVGVL+AC HGG V G F M Y +EP+ HYGCMVDLLGR
Sbjct: 369 VMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRV 428
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G LEEA ++ M M + ++ G L+ AC+ N+++GE VAK L++ G YV+LS
Sbjct: 429 GRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLS 488
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++YAS G W+E ++RA MK + K P S
Sbjct: 489 HVYASSGKWKEAAQVRAKMKEAGMQKEPGCS 519
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 7/197 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R E +AL+ + M V P+ +T+ VL A QL ALEIGR +HS
Sbjct: 246 WTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N F + I++YS+ G ++A+ VFDE +R + ++N +I+GLS +G++++AI+
Sbjct: 306 KFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIE 365
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLNSL 265
+F + P +VT V V +AC G ++ + +F ++ + +
Sbjct: 366 LFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFK----IFHSMTRDYGVEPQIEHYGCM 421
Query: 266 IDMYGKCGRMDLAYKVF 282
+D+ G+ GR++ AY +
Sbjct: 422 VDLLGRVGRLEEAYDLI 438
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ +R G + F + SK + A ++F + + A+I G G
Sbjct: 68 IHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGN 127
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+AI ++ + PD+ M S+ ACGS L +VH +K S+ L+
Sbjct: 128 YFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRA--LKLGLSSNRLVR 185
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSS------------------------------ 292
++++YGKCG + A +VF E+ + V+S
Sbjct: 186 LRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVC 245
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
WT+MI G+ N N AL+ F M+ +RPN T V VLSAC G ++ G+ M+
Sbjct: 246 WTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMR 305
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
++IE ++++ R G ++EA+ + + M + +V+ + ++ G +
Sbjct: 306 K-FEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMISGLSMNGKSR 361
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 228/411 (55%), Gaps = 10/411 (2%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T KC ++ +++ + TH + SY N +I Y LE KA+ ++ +M A
Sbjct: 390 TMYGKCNSMEDAEKVF-QSMPTHDIVSY------NVLIGGYAVLEDGTKAMQVFSWMRSA 442
Query: 116 GVLPDCYTLPIVLKASCQLFAL-EIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ P+ T+ + + L GR LH+ +R G S+E+ + I++Y+K G+ E
Sbjct: 443 GIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLES 502
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+ +F+ + + SWNAIIA Q G +EA+ +FI ++ G + D V + S+C S
Sbjct: 503 STNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCAS 562
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L LE +Q+H +KS SD+ ++N+ +DMYGKCG+MD +V + W
Sbjct: 563 LASLEEGMQLHG--LGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWN 620
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
++I GYA G EA + F M +G +P++VTFV +LSAC H G V +G ++ M +
Sbjct: 621 TLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASS 680
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ + P H C+VDLLGR G EA +E MP+ N +IW L+ + N+++G
Sbjct: 681 FGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRK 740
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
AK L EL+P+ D AYV+LSN+YA+ W +V+++R+ MK N+ K PA S
Sbjct: 741 TAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACS 791
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 150/329 (45%), Gaps = 18/329 (5%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I +Y+ K ++ M G+ PD TL ++ G +HSL +
Sbjct: 214 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 273
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R L+S+ + +++YS AG A +F R L SWN +I+ Q+ + +A+
Sbjct: 274 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 333
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
L P+ +T S AC S G L VH V Q+ ++ + L+ NSLI M
Sbjct: 334 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQR--NLLVGNSLITM 391
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC M+ A KVF + ++ S+ +I GYA +A+ F +MR +GI+PN++T
Sbjct: 392 YGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 451
Query: 329 VGVLSACVHGGKVQEGK-HFFEMMKNVYQIEPRFAH----YGCMVDLLGRAGLLEEARAM 383
+ +HG H + + Y I F ++ + + G LE + +
Sbjct: 452 IN-----IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 506
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ K N+V W ++ A NV++G
Sbjct: 507 FNSITNK-NIVSWNAIIAA-----NVQLG 529
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 4/263 (1%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G +H+L R GL N + + + LY G A+++F E PER + SW A++ LS
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+G +EA+ + +++ G + +V S CGSL + LQV V + S ++
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQV--IVSGLQNQV 180
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ NSLI M+G GR+ A K+F +++ + SW +MI Y+ G+ ++ F MR
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+RP+ T ++S C G + ++ +V++ AG L +
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRS-SLDSSVTVINALVNMYSAAGKLSD 299
Query: 380 ARAMVEGMPMKANVVIWGCLMGA 402
A + M + +++ W ++ +
Sbjct: 300 AEFLFWNMSRR-DLISWNTMISS 321
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 231/423 (54%), Gaps = 14/423 (3%)
Query: 49 DPAKIVATQL----SKCTNLLQLNQIY-AHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
D +V T L SKC +L + I+ +H I ++A WN +I Y R +
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCR----FNAP--WNAMISGYLRSGFNE 357
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KAL+++ M + + D YT V A L L +G+++H+ A++ GLE N S +
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417
Query: 164 S-LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ Y+K G E RKVF+ +R L SW +++ SQ +AI++F ++ G P+
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQ 477
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T SV +C +L LE QVH + +V D + ++L+DMY KCG + A KVF
Sbjct: 478 FTFSSVLVSCANLCLLEYGQQVHGIICKVGLDM--DKCIESALVDMYAKCGCLGDAKKVF 535
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
I + SWT++I G+A +G+ ++AL F M + G+ PN VTF+ VL AC HGG V+
Sbjct: 536 NRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVE 595
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG +F++MK Y + P HY C+VDLL R G L +A + MP++ N ++W L+GA
Sbjct: 596 EGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++GE A+ + + + YV+LSN Y G +++ +R VMK + + K P
Sbjct: 656 CRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEP 715
Query: 463 AYS 465
S
Sbjct: 716 GCS 718
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 11/283 (3%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
VA SKC+++ +++ + S F W +I + + M
Sbjct: 111 VAHAYSKCSDIDAACRLFDQM-------SQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ 163
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ PD + +L+ L ++E+G +H+ V G S+ F + +++Y+K + E
Sbjct: 164 SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE 223
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
+ KVF+ E + SWNA+I G + + +A D+F+ + G PD T + V A G
Sbjct: 224 DSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIG 283
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE--IDQPNVS 291
L D+ A +V Y ++ S+TL+ +LIDM KCG + A +F I +
Sbjct: 284 MLRDVNKAKEVSGYALELGV--DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
W +MI GY +G +AL+ F M ++ I +H T+ V +A
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+V + C L+ A VH ++ + K ++LN + Y KC +D A ++F +
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ Q N SWT +I G A NGL + + F M+ GI P+ + G+L C+ ++ G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190
Query: 345 K 345
Sbjct: 191 N 191
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 221/392 (56%), Gaps = 10/392 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC NL N+++ + T ++ W +II + R +A+ ++ M G+
Sbjct: 305 SKCGNLNGANEVFVKMGETTIVS-------WTSIIAAHVREGLHYEAIGLFDEMQSKGLR 357
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD Y + V+ A +L+ GR++H+ + + SN + +++Y+K G E+A +
Sbjct: 358 PDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLI 417
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + P + + SWN +I G SQ+ EA+ +F+ ++K +PDDVTM V AC L L
Sbjct: 418 FSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQK-QLKPDDVTMACVLPACAGLAAL 476
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E ++H ++ ++ SD + +L+DMY KCG + LA ++F I + ++ WT MI
Sbjct: 477 EKGREIHGHI--LRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIA 534
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GY +G EA+ F MR +GI P +F +L AC H G ++EG F+ MK+ IE
Sbjct: 535 GYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIE 594
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY CMVDLL R+G L A +E MP+K + IWG L+ C +V++ E VA+H
Sbjct: 595 PKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEH 654
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
+ ELEP + YV+L+N+YA WEEV++I+
Sbjct: 655 IFELEPENTRYYVLLANVYAEAEKWEEVKKIQ 686
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 188/371 (50%), Gaps = 13/371 (3%)
Query: 32 RKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNN 91
R H IS+ +D AK+V ++ C +L++ +I+ I+ + F WN
Sbjct: 78 RVHSIISSNGMAID-EVLGAKLVFMYVN-CGDLVKGRRIFDGILNDKI-------FLWNL 128
Query: 92 IIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG 151
++ Y ++ ++++ ++ M G+ D YT VLK + +++H ++LG
Sbjct: 129 LMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLG 188
Query: 152 LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
S + I+ Y K G+ E AR +FDE +R + SWN++I+G + +G ++ ++ FI
Sbjct: 189 FGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFI 248
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+ G + D T+V+V AC ++G+L L +H Y VK+ + N+L+DMY K
Sbjct: 249 QMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAY--GVKAGFSGGVMFNNTLLDMYSK 306
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG ++ A +VF ++ + + SWTS+I + GL EA+ F M+ G+RP+ V
Sbjct: 307 CGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSV 366
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+ AC + +G+ +K + ++++ + G +EEA + +P+K
Sbjct: 367 VHACACSNSLDKGREVHNHIKK-NNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK- 424
Query: 392 NVVIWGCLMGA 402
N+V W ++G
Sbjct: 425 NIVSWNTMIGG 435
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 12/280 (4%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
VL+ +L +LE G+++HS+ G+ +E + + +Y GD K R++FD K
Sbjct: 63 VLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDK 122
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ WN +++ ++ G +E++ +F +++ G D T V + + +VH
Sbjct: 123 IFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHG 182
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
YV ++ S ++NSLI Y KCG ++ A +F E+ +V SW SMI G NG +
Sbjct: 183 YVLKLGF--GSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFS 240
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA---- 362
L+ F M G+ + T V VL AC + G + G+ + Y ++ F+
Sbjct: 241 RNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRAL-----HAYGVKAGFSGGVM 295
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++D+ + G L A + M + +V W ++ A
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMG-ETTIVSWTSIIAA 334
>gi|449436789|ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 218/392 (55%), Gaps = 12/392 (3%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
+ HI + H+ F N++IR ++ + P L +Y M+R + P+ YT P VLK+
Sbjct: 67 FTHIPKPHV-------FICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKS 119
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
L G+ +H+ V+ G S+ + ++ + +Y+ G +KVFDE + SW
Sbjct: 120 LADFKDLVGGQSVHTHVVKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSW 179
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+I G +A+ +F ++ G +P+ VT+V+ +AC S G +E+ + +H++V
Sbjct: 180 TILIMGYRVSFMLDDALIVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFV-- 237
Query: 251 VKSKQ-KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
K+K+ + D ++ +LIDMYGKCGR+ A VF + + NV +W I G A+ EA
Sbjct: 238 -KTKRWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEA 296
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-FFEMMKNVYQIEPRFAHYGCMV 368
+ F M E G+ + VT V VLSAC H G V G+ F+ ++ + P HY CMV
Sbjct: 297 IAWFKRMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMV 356
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
D+L R G +EEA M++ MP +A +WG L+ G++++ E A+ L E+EP + G
Sbjct: 357 DILARNGCIEEACVMIKDMPFEATRSMWGSLLTGSRAHGSLEVSEIAARRLVEMEPENGG 416
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
YVVLSNIYA G W EVE++R +MK R L K
Sbjct: 417 YYVVLSNIYAEMGKWSEVEKVREIMKERGLKK 448
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 249/512 (48%), Gaps = 104/512 (20%)
Query: 53 IVATQLSKCTNLLQLNQIYAHIIRTHM-----------LHSYSAA--------------- 86
+ ++ L+ C +L L Q++A++ +T + LHS +
Sbjct: 7 LCSSLLTNCRSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP 66
Query: 87 ----FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGR 141
F N +IR + P+ +L ++ M R P D ++ +LKA+ +LE G
Sbjct: 67 NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126
Query: 142 QLHSLAVRLGLESNEFC---------ESGFISL--------------------------- 165
QLH A+ GL+++ F E GF++
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186
Query: 166 --------------------------YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
Y+KAG+ E ARK+F E P + SW+ +I G +
Sbjct: 187 DVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAH 246
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+G EA F L++ G P++V++ SAC G +E +H ++ +KS
Sbjct: 247 NGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFI------EKSGF 300
Query: 260 LML----NSLIDMYGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFH 314
L + N+L+D Y KCG + +A VF + ++ ++ SWTSMI G A +G EA+ FH
Sbjct: 301 LWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFH 360
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
M ESGIRP+ + F+ +L AC H G +++G +F MK++Y IEP HYGCMVDL GRA
Sbjct: 361 EMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRA 420
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLS 434
G L++A + MP+ +IW L+GAC GNVK+ E V + L EL+P + G +V+LS
Sbjct: 421 GQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLS 480
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
NIYA G W++V +R M + + K P +S+
Sbjct: 481 NIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSM 512
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 229/410 (55%), Gaps = 33/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
W +I Y R +A+ ++ M + V P+ T+ +L A Q E+G+ LH
Sbjct: 221 WTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIR 280
Query: 145 ---------------SLAVRLGL------------ESNEFCESGFISLYSKAGDFEKARK 177
+ V+ G + F + ++ Y+K GD ARK
Sbjct: 281 RKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARK 340
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSACGSLG 236
+FDE PER + SWNA+IAG SQ+ + EA+++F + G P + T+V V SA G LG
Sbjct: 341 LFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLG 400
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE+ ++H Q S ++ N+++DMY KCG +D A K+F + + N+ SW SM
Sbjct: 401 CLEMGQEIHCNHVNKIGIQVS-LILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSM 459
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I YA+ G A +AL F M SG++P+H+TF+GVLSAC +GG V EG+ FE M+N +
Sbjct: 460 ISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFG 519
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+EP+ HY CMVDLL R GLL+EA ++ MPM+A+ WG L+ AC K GNV+M +
Sbjct: 520 VEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAG 579
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L EL+P G Y +L+NI A W++V +R +M+ R + K+P +SL
Sbjct: 580 EKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSL 629
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 187/416 (44%), Gaps = 67/416 (16%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAA------------------------------F 87
L C+++ QL QI AHI T +++ A F
Sbjct: 59 LQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNCF 118
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN +I+ Y + P + M R D + LKA Q +G +HS+
Sbjct: 119 FWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSVI 178
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G +S+ F ++G I Y + G AR++FDE+ + + +W +I G +++ EAI
Sbjct: 179 WKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAI 238
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL-MLNSLI 266
+F + +P++VTM+++ SAC GD E+ +H++ ++ K + +L +LN+++
Sbjct: 239 ALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEH---IRRKDITCSLNLLNAML 295
Query: 267 DMYGKCG-------------RMDL------------------AYKVFWEIDQPNVSSWTS 295
DMY KCG R D+ A K+F E+ + N+ SW +
Sbjct: 296 DMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNA 355
Query: 296 MIVGYAANGLANEALDCFHYMRE-SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
MI GY+ N EAL+ FH M + G+ P T V VLSA G ++ G+ N
Sbjct: 356 MIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNK 415
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
I+ ++D+ + G ++ A + MP K N+V W ++ A +G+ K
Sbjct: 416 IGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEK-NLVSWNSMISAYASYGHAK 470
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENP 183
++L++ +F L +Q+ + GL + F S ++ S +GD A +FD+
Sbjct: 57 LILQSCSSMFQL---KQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTE 113
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
WN +I G + F + + E D + V ACG + + +
Sbjct: 114 LPNCFFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMA 173
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH ++ K SD + N LI Y + G + A ++F E +V +WT+MI GYA N
Sbjct: 174 VHSVIW--KRGFDSDLFVQNGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARN 231
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
+EA+ F+ M S ++PN VT + +LSAC G + GK E ++ I
Sbjct: 232 NWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRR-KDITCSLNL 290
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
M+D+ + G L AR + M + +V W L+ K G++
Sbjct: 291 LNAMLDMYVKCGCLTTAREIFNNME-RRDVFSWTSLLNGYAKNGDL 335
>gi|296083914|emb|CBI24302.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/474 (32%), Positives = 252/474 (53%), Gaps = 16/474 (3%)
Query: 3 SLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAAS--SFLDTHEDPAKIVATQLSK 60
+L+P +S + + +LHR H H I+++S + T E A+ + +
Sbjct: 50 TLLPSLSPQDALLLYNQMVLHRTSHNHFTFTHALIASSSLHALHKTLEIHARAIKSG-HY 108
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSA--------AFHWNNIIRLYTRLEAPKKALDIYIFM 112
+Q ++++++ + + + S W +II ++ ++A+ ++ M
Sbjct: 109 SDIFIQNTLLHSYVVENNFVFAKSVFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSM 168
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
V P+ TL V+ A C L A+ G+ +H ++R N ++ + Y K G
Sbjct: 169 D---VKPNTSTLVSVVSACCGLRAVRFGKAIHGYSLRSMDGDNIILDNALLDFYVKCGYL 225
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSA 231
A+ +F + R + SW ++ GL+Q G +EA+++F + K G P++VT+V+V +A
Sbjct: 226 VSAKYLFMKMFRRDVISWTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTA 285
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
C SL L L VH Y+ + D + N+LI+MY KC M +A +VF E+ ++
Sbjct: 286 CSSLSALNLGRWVHSYI-STRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDMI 344
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
SW+++I G A NG AL F M G+ P+ VTF+G+LSAC H G V++G FF+ M
Sbjct: 345 SWSTIIGGMAMNGHGMHALQFFSLMLVHGVSPDDVTFIGLLSACSHAGLVEQGLIFFKAM 404
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
NVY I P+ HY CMVD+ GRAGLLEEA A + GMPM+A IWG L+ AC+ GN KM
Sbjct: 405 NNVYGIAPQMQHYACMVDMYGRAGLLEEAEAFIRGMPMEAEGPIWGALLNACKIHGNEKM 464
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ + L+ + S G +LSN YAS W++ ++R +M+ L K+ S
Sbjct: 465 FGRIDQSLRNAKGVSIGTLALLSNTYASSNRWDDANKVRDMMRDMGLKKMSGCS 518
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 146/279 (52%), Gaps = 16/279 (5%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
+ CT L QLNQI+AH+++TH +N ++ + P+ AL +Y M
Sbjct: 23 IPTCT-LNQLNQIHAHLLKTH-----KPPLIFNTLLPSLS----PQDALLLYNQMVLHRT 72
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
+ +T L AS L AL ++H+ A++ G S+ F ++ + Y +F A+
Sbjct: 73 SHNHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENNFVFAKS 132
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VF + SW +II+GLS+ G +EAI F+ + +P+ T+VSV SAC L
Sbjct: 133 VFKSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMD---VKPNTSTLVSVVSACCGLRA 189
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+ +H Y ++S + ++ N+L+D Y KCG + A +F ++ + +V SWT+M+
Sbjct: 190 VRFGKAIHGY--SLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDVISWTTMV 247
Query: 298 VGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSAC 335
G A GL EA++ F M + G PN VT V VL+AC
Sbjct: 248 GGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTAC 286
>gi|359491803|ref|XP_002269228.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 550
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 228/453 (50%), Gaps = 70/453 (15%)
Query: 76 RTHMLHSYSAA-FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
+T LH+++ + F +N II +R ++ Y+ M AG PD +T P ++K+S
Sbjct: 66 KTIFLHTHNPSPFMFNTIIMASSR---TLDSVTFYVCMLHAGHFPDNFTFPFLIKSSSAS 122
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN------------ 182
+G QLH+ V+ GL+ + F + I+LYS + ARKVFDE+
Sbjct: 123 PTSLLGHQLHAHVVKFGLDRDVFVVNNMIALYSSFRELRSARKVFDESYSLVDVVSWTTL 182
Query: 183 --------------------PERKLGSWNAII---------------------------- 194
P + SWNA+I
Sbjct: 183 ITGFSNSGQIDEARKIFDLMPLKNTVSWNAMISGYAGSSRINEARKLFDEMPDRDAASWS 242
Query: 195 ---AGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+G SQ G EA+D+F+ + P++ +VS SAC L LE +H Y+ +
Sbjct: 243 AMVSGYSQLGMCNEALDLFMEMVTGDKMIPNEAALVSAVSACAQLRALEEGRWLHSYIKE 302
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
K + + + L+DMYGKCG + A VF + + NV+SW SMI G A NG EAL
Sbjct: 303 --KKLRINVTLGTVLLDMYGKCGSILDAAGVFNLMSERNVNSWNSMIAGLALNGCGKEAL 360
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F M+ G PN +TF+ +L+ C H G + EG+ F MM VY I+P+ HYGCMVDL
Sbjct: 361 ALFWKMQFVGPSPNAITFIALLTGCSHSGLITEGRWLFSMMTQVYGIKPQLKHYGCMVDL 420
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
LGRAGL++EA VE MPMK + +WG L+GAC G V++GE + K L +LEP G Y
Sbjct: 421 LGRAGLVKEALDFVEKMPMKPHSELWGALVGACRIHGQVELGEELGKRLIDLEPHHGGRY 480
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+L NI+A+ W++V +R + K R + K P
Sbjct: 481 ALLCNIFAAAQRWDDVAMVRDLEKGRKVLKNPG 513
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 217/388 (55%), Gaps = 13/388 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I ++L ++ M G+ P+ YTL VL A C + L++G Q+HSL++
Sbjct: 234 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 293
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG------LSQDGR 202
+LG S+ ++ + LY K G +A+K+F+ L +WNA+IAG L++D
Sbjct: 294 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 353
Query: 203 A-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
A A+ MF L + G +PD T SV S C +L LE Q+H + +KS +
Sbjct: 354 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI--IKSGVLA 411
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D ++ +L+ MY KCG +D A K F E+ + SWTSMI G+A +GL+ +AL F MR
Sbjct: 412 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR 471
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
GI+PN VTFVGVLSAC H G E ++FE+M+ Y I+P H+ C++D+ R G +
Sbjct: 472 LVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 531
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EEA +V M + N IW L+ C G +G + A+ L +L+P YV L N++
Sbjct: 532 EEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMH 591
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
S G W++V ++R +MK + K+ +S
Sbjct: 592 ISAGRWKDVSKVRKLMKEEKVGKLKDWS 619
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 33/339 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + P AL ++I M AG P YTL IVL A L ++E G+Q+H+ +
Sbjct: 133 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 192
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + + S YSK E A K F E+ + SW ++I+ +G+A ++
Sbjct: 193 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 252
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ + G +P++ T+ SV SAC + L+L Q+H +K S L+ NS++ +
Sbjct: 253 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS--LSIKLGYGSSILIKNSIMYL 310
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY-----------AANGLANEALDCFHYMR 317
Y KCG + A K+F ++ N+ +W +MI G+ AA+ + AL F +
Sbjct: 311 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 370
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL------ 371
SG++P+ TF VLS C + +++G+ QI + G + D++
Sbjct: 371 RSGMKPDLFTFSSVLSVCSNLVALEQGE----------QIHGQIIKSGVLADVVVGTALV 420
Query: 372 ---GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ G +++A MP + ++ W ++ + G
Sbjct: 421 SMYNKCGSIDKASKAFLEMPSR-TMISWTSMITGFARHG 458
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 144/308 (46%), Gaps = 28/308 (9%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
Y P++ + + A E R +H V+ G + F + +++YSK G E A KVFD
Sbjct: 66 YYFPLLQECIDRNLATE-ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDN 124
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P R + +W ++ G Q+ A+ +FI + + G P + T+ V +AC SL +E
Sbjct: 125 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 184
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
QVH Y+ +K DT + NSL Y K R++ A K F I + +V SWTS+I
Sbjct: 185 KQVHAYL--IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 242
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEM 350
NG A +L F M G++PN T VLSAC +H ++ G +
Sbjct: 243 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 302
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+KN ++ L + G L EA+ + EGM N+V W ++ K ++
Sbjct: 303 IKN------------SIMYLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIAGHAKMMDLA 349
Query: 411 MGEWVAKH 418
+ VA H
Sbjct: 350 EDD-VAAH 356
>gi|115476560|ref|NP_001061876.1| Os08g0434000 [Oryza sativa Japonica Group]
gi|42407498|dbj|BAD10615.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42409483|dbj|BAD09839.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623845|dbj|BAF23790.1| Os08g0434000 [Oryza sativa Japonica Group]
Length = 601
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 215/382 (56%), Gaps = 12/382 (3%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ F N I+R L P AL G + ++L IVL C+ AL RQLH
Sbjct: 96 STFRLNAILR---SLRGPD-ALRFLRRARALGRRGNAFSLSIVL-GHCR--ALAHARQLH 148
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ V G + + +S Y+ GD + ARKVFDE P R +WN +I +++ R K
Sbjct: 149 ANVVAEGHSPDALLATSLVSSYAACGDGDSARKVFDEMPVRDTIAWNVLITCYTRNRRTK 208
Query: 205 EAIDMFIGLK--KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+A+ +F ++ + G EPDDVT + + AC SLG L+ +V +Y V + +
Sbjct: 209 DALKLFDAMRGGENGAEPDDVTCILLLQACTSLGALDFGEKVWEYA--VDHGYGGELKVR 266
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
NSLI MY KCG +D AY+VF E + +V +W++MI G A+NG +A+ F M SG+
Sbjct: 267 NSLITMYTKCGCVDKAYQVFCETPKKSVVTWSAMISGLASNGFGKDAISAFEEMGRSGVA 326
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ TF GVLSAC H G V EG FF++M YQ++P HYGCMVDL+GRAGLL++A
Sbjct: 327 PDEQTFTGVLSACSHSGLVDEGFKFFDIMCYEYQLKPNVHHYGCMVDLMGRAGLLDQAYE 386
Query: 383 M-VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+ V+ M + + IW L+GAC G++ +GE V HL EL+ G YV+L N YA+
Sbjct: 387 LVVKDMRVAPDATIWRTLLGACRIHGHIDLGERVINHLIELKAQQAGDYVLLLNTYAAVE 446
Query: 442 LWEEVERIRAVMKHRNLAKIPA 463
W +V +R +MK + + P
Sbjct: 447 DWGKVAEVRKLMKEKGIQTTPG 468
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 208/359 (57%), Gaps = 34/359 (9%)
Query: 139 IGRQLHSLAVRLGLESNE-------------------------------FCESGFISLYS 167
+G QLHS+ VR GL S+ FC + IS Y
Sbjct: 87 LGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYV 146
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMV 226
K+G+ AR++FD P R + SW +I +Q + EA+++F ++ + G EPD V ++
Sbjct: 147 KSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALL 206
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV SACG LG ++L VH++V V+ ++N++IDMY K G + A +VF +D
Sbjct: 207 SVLSACGDLGAVDLGEWVHRFV--VRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMD 264
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
Q +V +WT++I G+A +GL EA++ F M + PN VTF+ +LSAC H G G+
Sbjct: 265 QKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRW 324
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKF 406
+F++M + Y+I+ R HYGCMVDLLGRAG L EA+ +V+ MP KAN IWG L+ A
Sbjct: 325 YFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTH 384
Query: 407 GNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+ ++G+ HL ELEP + G Y++LSNIYA + W++V ++R MK R L +P S
Sbjct: 385 GDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGAS 443
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/450 (32%), Positives = 241/450 (53%), Gaps = 44/450 (9%)
Query: 58 LSKCTNLLQL---NQIYAHIIRTH----------MLHSYSAAFHWNNIIRLYTRLE---- 100
L C++L L +Q +A+II+ H + YS + ++ ++R+
Sbjct: 175 LHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNV 234
Query: 101 --------------APKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
AP K L +++ M + P+ +TL L C++ +LE+G Q++SL
Sbjct: 235 ISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSL 294
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG------LSQD 200
++ G ESN + + LY K+G +A ++F+ + + +WNA+IAG L++D
Sbjct: 295 CIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKD 354
Query: 201 G-----RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
R EA+ +F L G +PD T+ SV S C + +E Q+H +K+
Sbjct: 355 NLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQT--IKTGF 412
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
SD ++ SLI MY KCG ++ A K F E+ + +WTSMI G++ +G++ +AL F
Sbjct: 413 LSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFED 472
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M +G+RPN VTFVGVLSAC H G V + ++FE+M+ Y+I+P HY CMVD+ R G
Sbjct: 473 MSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLG 532
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LE+A ++ M + + IW + C+ GN+++G + A+ L L+P YV+L N
Sbjct: 533 RLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLN 592
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+Y S +E+V R+R +M+ + K+ +S
Sbjct: 593 MYLSAERFEDVSRVRKMMEEEKVGKLKDWS 622
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 149/299 (49%), Gaps = 20/299 (6%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N+ +++ +++R +++ W ++ + + PK A+ ++ M AG
Sbjct: 113 AKCGNMEDARRVFDNMLRRNVVA-------WTTLMVGFVQNSQPKHAIHVFQEMLYAGSY 165
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P YTL VL A L +L++G Q H+ ++ ++ + S SLYSK G E A K
Sbjct: 166 PSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKT 225
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F E+ + SW + ++ + +G + + +F+ + +P++ T+ S S C + L
Sbjct: 226 FSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSL 285
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
EL QV Y +K +S+ + NSL+ +Y K G + A+++F +D ++ +W +MI
Sbjct: 286 ELGTQV--YSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIA 343
Query: 299 GYA-----------ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
G+A A +EAL F + SG++P+ T VLS C +++G+
Sbjct: 344 GHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQ 402
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 4/164 (2%)
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH +V +K+ + +++ L+++Y KCG M+ A +VF + + NV +WT+++VG+ N
Sbjct: 89 VHGHV--MKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLRRNVVAWTTLMVGFVQN 146
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
A+ F M +G P+ T VL AC ++ G F + Y ++ +
Sbjct: 147 SQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIK-YHVDFDASV 205
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ L + G LE+A + K NV+ W + AC G
Sbjct: 206 GSALCSLYSKCGRLEDALKTFSRIREK-NVISWTSAVSACADNG 248
>gi|125540774|gb|EAY87169.1| hypothetical protein OsI_08570 [Oryza sativa Indica Group]
Length = 613
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 217/387 (56%), Gaps = 9/387 (2%)
Query: 86 AFHWNNIIRLYT-----RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
AF +N ++R Y P AL +++ M GV PD YT P V KA QL AL+ G
Sbjct: 98 AFDYNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYTFPFVFKACAQLGALQEG 157
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLS 198
RQL V+LG + +E ++ IS Y K G+ + AR+ F+ E+ E+ SW+A++A +
Sbjct: 158 RQLQGHLVKLGFQRDEHSQNSLISFYGKCGEADLARRAFEQMEDDEQTTASWSALLAAYT 217
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ GR E ++ F + + G+ PD+ +MVS SAC LG ++ +H + +++ + +
Sbjct: 218 RAGRWAECVESFGAMVRAGWRPDESSMVSALSACAHLGAHDVGRSIHCAL--LRNTARLN 275
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T M SL+DMY KCG ++ A VF +D N ++++M+ G A +G +AL+ F M
Sbjct: 276 TFMSTSLVDMYAKCGCIENAAAVFDAMDDKNAWTYSAMVSGLALHGDGRKALEVFDAMVR 335
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
G RP+ +VGVL+AC G ++EG F+ M+ +++ P HYGCMVDL+ RAG L+
Sbjct: 336 EGHRPDAAVYVGVLNACSRAGLLEEGLRCFDRMRLEHKLTPNAQHYGCMVDLMARAGRLD 395
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
+ARA++ MP W L+ AC GN+++ E + L+ L + G Y++LS+++A
Sbjct: 396 DARALIGNMPTGPTDTAWRSLLNACRIHGNLELAERALQELERLGATNAGDYIILSDMHA 455
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ R R LA+ P YS
Sbjct: 456 RAHNRDAAAARRTEAVDRGLAQAPGYS 482
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 9/142 (6%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE-----ALDCFHYMRESGIRPNHVT 327
G M A +F +D P + +++ GY A G AL F M + G+ P+ T
Sbjct: 81 GSMAYAASIFAALDDPEAFDYNTLMRGYVAGGGGGGRDPAAALRLFVDMVDDGVEPDSYT 140
Query: 328 FVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
F V AC G +QEG+ ++K +Q + ++ G+ G + AR E
Sbjct: 141 FPFVFKACAQLGALQEGRQLQGHLVKLGFQRDEH--SQNSLISFYGKCGEADLARRAFEQ 198
Query: 387 MPMKANVVI-WGCLMGACEKFG 407
M W L+ A + G
Sbjct: 199 MEDDEQTTASWSALLAAYTRAG 220
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 211/385 (54%), Gaps = 10/385 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y P +AL ++ MS GV P+ T+ L + + G+ +H
Sbjct: 162 WTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIR 221
Query: 149 RLGLE-------SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+ G + SN + + +Y+K G F+ AR +F++ P+R + SWN++I +Q
Sbjct: 222 KAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYE 281
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
R KEA+D+F + G PD T +SV S C L L L VH Y+ K+ +D +
Sbjct: 282 RHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYL--XKTGIGTDISL 339
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE-SG 320
+L+DMY K G + A K+F + + +V WTSMI G A +G NEAL F M E S
Sbjct: 340 ATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSS 399
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ P+H+T++GVL AC H G V+E K F +M +Y I P HYGCMVDLL R+G EA
Sbjct: 400 LVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEA 459
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
++E M ++ N+ I G L+ C+ N+ + V + L ELE GA+V+LSNIYA
Sbjct: 460 ERLMETMAIQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKA 519
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G WE+V R VMKH+ + KI +S
Sbjct: 520 GRWEDVNGTRKVMKHKRITKIIGHS 544
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 167/341 (48%), Gaps = 9/341 (2%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+ + WN++IR + P+ ++ +Y + G PD +T P VLKA C + + G+ +H
Sbjct: 57 SVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIH 116
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
V+ G E++ + +G + +Y D + KVFD P + +W +IAG + +
Sbjct: 117 CCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQPY 176
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK-----SKQKSDT 259
EA+ +F + CG EP+++TMV+ C D + VH+++ + S S+
Sbjct: 177 EALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSNI 236
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++ ++++MY KCG +A +F ++ Q N+ SW SMI Y EALD F M S
Sbjct: 237 ILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTS 296
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
GI P+ TF+ VLS C H + G+ + I + ++D+ + G L
Sbjct: 297 GIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKT-GIGTDISLATALLDMYAKTGGLGS 355
Query: 380 ARAMVEGMPMKANVVIWGCLMG--ACEKFGNVKMGEWVAKH 418
A+ + + K +VV+W ++ A GN +G + H
Sbjct: 356 AQKIFSSLQ-KRDVVMWTSMINGLAMHGDGNEALGMFQTMH 395
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
S GD A VF + + WN++I G + + ++ ++ L + G+ PD T
Sbjct: 38 SXFGDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFP 97
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V AC ++ D + +H + VKS ++D L+ MY C M KVF I
Sbjct: 98 FVLKACCAIADQDCGKCIHCCI--VKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIP 155
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
NV +WT +I GY N EAL F M G+ PN +T V L C G+
Sbjct: 156 IWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQW 215
Query: 347 FFEMMKNVYQIEPRFAHYG-------CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ ++ +P + ++++ + G + AR + MP + N+V W +
Sbjct: 216 VHQHIRKA-GYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQR-NIVSWNSM 273
Query: 400 MGACEKF 406
+ A ++
Sbjct: 274 INAYNQY 280
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 251 VKSKQKSDTLMLNSLIDM-----YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
++ +K L+L+ LID +G DL VF +ID P+V W SMI G+ N
Sbjct: 17 MRELKKLRGLILSKLIDFCVDSXFGDINNADL---VFRQIDAPSVYIWNSMIRGFVNNHN 73
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSA-----------CVHGGKVQEGKHFFEMMKNV 354
++ + + E+G P+H TF VL A C+H V+ G FE +
Sbjct: 74 PRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIHCCIVKSG---FE--ADA 128
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
Y Y D+ ++GL + + +P+ NVV W CL+
Sbjct: 129 YTATGLLHMYVSCADM--KSGL-----KVFDNIPI-WNVVAWTCLIAG 168
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 217/427 (50%), Gaps = 46/427 (10%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
+ F WN ++ YT KKAL+++ M GV P+ T+ + A L L GR+
Sbjct: 174 FKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGRE 233
Query: 143 LHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARK------------------------ 177
+H +++ L+S+ + + Y+K E AR+
Sbjct: 234 IHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQ 293
Query: 178 -------------------VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
VF E R + WN+II+ +Q GR+ A+D+ +
Sbjct: 294 YGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNV 353
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
E + VTMVS AC L L ++H+++ ++ + +LNSLIDMYG+CG + +
Sbjct: 354 EVNTVTMVSALPACSKLAALRQGKEIHQFI--IRCGLDTCNFILNSLIDMYGRCGSIQKS 411
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
++F + Q ++ SW MI Y +G +A++ F R G++PNH+TF +LSAC H
Sbjct: 412 RRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHS 471
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
G ++EG +F+MMK Y ++P Y CMVDLL RAG E +E MP + N +WG
Sbjct: 472 GLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGS 531
Query: 399 LMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
L+GAC N + E+ A++L ELEP S G YV+++NIY++ G WE+ +IR +MK R +
Sbjct: 532 LLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 591
Query: 459 AKIPAYS 465
K P S
Sbjct: 592 TKPPGCS 598
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 161/357 (45%), Gaps = 46/357 (12%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W I+ +Y L ++ + ++ M GV PD + P V KA +L +G+ ++
Sbjct: 77 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 136
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ +G E N + + ++ K G + AR+ F+E + + WN +++G + G K+A
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKA 196
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++F + G +P+ +T+ S SAC +L L ++H Y +V+ + SD L+ NSL+
Sbjct: 197 LNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLV 255
Query: 267 DMYGKC-------------------------------------------GRMDLAYKVFW 283
D Y KC RM +A VF
Sbjct: 256 DYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFS 315
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
E+ +V W S+I A +G + ALD M S + N VT V L AC +++
Sbjct: 316 ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQ 375
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
GK + + F ++D+ GR G ++++R + + MP + ++V W ++
Sbjct: 376 GKEIHQFIIRCGLDTCNFI-LNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMI 430
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 145/303 (47%), Gaps = 18/303 (5%)
Query: 99 LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
L P + ++IY A +L C +L+ L +G Q+H+ V G++ EF
Sbjct: 3 LTNPDECIEIY-----ASILQKCR----------KLYNLRLGFQVHAQLVVNGVDVCEFL 47
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
S + +Y + G E AR++FD+ ER + SW AI+ G +E I +F + G
Sbjct: 48 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGV 107
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
PD V AC L + + V+ Y+ + + ++ + S++DM+ KCGRMD+A
Sbjct: 108 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFE--GNSCVKGSILDMFIKCGRMDIA 165
Query: 279 YKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
+ F EI+ +V W M+ GY + G +AL+ F M G++PN +T +SAC +
Sbjct: 166 RRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNL 225
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGC 398
++ G+ V +++ +VD + +E AR GM + ++V W
Sbjct: 226 SLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNA 284
Query: 399 LMG 401
++
Sbjct: 285 MLA 287
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 210/384 (54%), Gaps = 3/384 (0%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I +T+ P+ AL++++ + +GV PD T+ +L A L L +G
Sbjct: 492 YKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGIC 551
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG-SWNAIIAGLSQDG 201
H ++ G+ES + I +Y+K G A +F N K SWN +IAG +G
Sbjct: 552 FHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNG 611
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
A EAI F +K P+ VT V++ A L L A+ H + ++ S TL+
Sbjct: 612 CANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACI--IRMGFISSTLI 669
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
NSLIDMY K G++ + K F E++ SW +M+ GYA +G AL F M+E+ +
Sbjct: 670 GNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHV 729
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+ V+++ VLSAC H G +QEG++ F+ M + +EP HY CMVDLLG AGL +E
Sbjct: 730 PVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVL 789
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+++ MP + + +WG L+GAC+ NVK+GE HL +LEP + Y+VLS+IYA G
Sbjct: 790 CLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCG 849
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
W + R R+ M L K P YS
Sbjct: 850 RWIDARRTRSNMTDHGLKKNPGYS 873
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 180/362 (49%), Gaps = 24/362 (6%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH-----WNNIIRLYTRLEAPKKALDIYIFM 112
L C L L QI+A +I + ++ + WN++IR Y+RL ++A+ Y M
Sbjct: 59 LRSCKYLNPLLQIHARLIVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTM 118
Query: 113 SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
S G+ PD YT VLKA G +H LE + F +G + +Y K G
Sbjct: 119 SYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHL 178
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSA 231
+ ARKVFD+ P + + SWNA+I+GLSQ EA+++F ++ + G EPD V+++++ A
Sbjct: 179 DNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPA 238
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
L D++ +H YV ++ ++ NSLIDMY KCG + LA+++F ++ +
Sbjct: 239 VSRLEDVDSCKSIHGYVV----RRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDI 294
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-- 349
SW +M+ GY +G E L M+ I+ N ++ V + A +++GK
Sbjct: 295 SWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYA 354
Query: 350 ----MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
M ++ P +V + + G L++A+ + + ++V+W + A +
Sbjct: 355 LQLGMTSDIVVATP-------IVSMYAKCGELKKAKEFFLSLEGR-DLVVWSAFLSALVQ 406
Query: 406 FG 407
G
Sbjct: 407 AG 408
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 6/371 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ + + P +AL I+ M G+ PD L ++ A ++ + +G+ +H +
Sbjct: 397 WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVI 456
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + S+ + +S+Y++ F A +F+ + + +WN +I G ++ G + A++
Sbjct: 457 KADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALE 516
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF+ L+ G +PD TMVS+ SAC L DL L + H + +K+ +S+ + +LIDM
Sbjct: 517 MFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNI--IKNGIESEMHVKVALIDM 574
Query: 269 YGKCGRMDLAYKVF-WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG + A +F + SW MI GY NG ANEA+ F+ M+ +RPN VT
Sbjct: 575 YAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVT 634
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV +L A + ++E F + + I ++D+ ++G L + M
Sbjct: 635 FVTILPAVSYLSILREAMAFHACIIRMGFISSTLIG-NSLIDMYAKSGQLSYSEKCFHEM 693
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE-PWSDGAYVVLSNIYASRGLWEEV 446
K + W ++ G ++ + +QE P +Y+ + + GL +E
Sbjct: 694 ENKGTIS-WNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEG 752
Query: 447 ERIRAVMKHRN 457
I M ++
Sbjct: 753 RNIFQSMTEKH 763
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 130 ASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
A+ + LE G+++H+ A++LG+ S+ + +S+Y+K G+ +KA++ F R L
Sbjct: 337 AATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVV 396
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
W+A ++ L Q G EA+ +F ++ G +PD + S+ SAC + L +H YV
Sbjct: 397 WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYV- 455
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+K+ SD + +L+ MY +C A +F + +V +W ++I G+ G A
Sbjct: 456 -IKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLA 514
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMV 368
L+ F ++ SG++P+ T V +LSAC + G F ++KN IE ++
Sbjct: 515 LEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKN--GIESEMHVKVALI 572
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIW----------GCLMGACEKFGNVKM 411
D+ + G L A + + V W GC A F +K+
Sbjct: 573 DMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKL 625
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 224/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
WN ++R Y R A+ + M R+GV PD TL + A + L +GR++H
Sbjct: 118 WNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD 177
Query: 145 -----SLAVRLGL----ESNEFCESG-----------------FISLYSKAGDFEKARKV 178
+L V L N+ E +S Y AG +KAR +
Sbjct: 178 NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVL 237
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ E+ L W A+I Q G +EA+ +F ++ EPD T+V++ + C +LG L
Sbjct: 238 FNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGAL 297
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ +H+Y Q K K D ++ +LIDMY KCG ++ + +VFW + + ++WT++I
Sbjct: 298 DQGEWIHQYAEQ--RKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIIC 355
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A NG A AL+ F M+ S ++P+ VTF+GVLSAC HGG V EG+ F M+ VYQIE
Sbjct: 356 GLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIE 415
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-IWGCLMGACEKFGNVKMGEWVAK 417
PR HY C+V+LLGRAGLL+EA ++ +P+ + + ++G L+ AC+ GNV+M E + K
Sbjct: 416 PRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTK 475
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ E + +++SN+YA+ WE+V R+R M H + K SL
Sbjct: 476 RICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCSL 524
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 159/324 (49%), Gaps = 11/324 (3%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +IR R + + + +Y + G++ D +T P VL+A L GR+ H+ A++
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIK 77
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
G + + S + +Y+ G + ARKVFDE P R L WN ++ + GR A+ +
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVAL 137
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+++ G PD VT+V+ +AC DL L ++H Y+ V + + N+L+DMY
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFG---FNLPVANALLDMY 194
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
K ++ A K+F ++ N+ SWT ++ GY G ++A F+ +E + + +
Sbjct: 195 TKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDL----ILWT 250
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEG 386
+++ACV G +E F M+ + ++EP ++ G L++ + E
Sbjct: 251 AMINACVQHGCFEEALTLFRDMQ-MQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQ 309
Query: 387 MPMKANVVIWGCLMGACEKFGNVK 410
MK + V+ L+ K G+++
Sbjct: 310 RKMKIDAVLGTALIDMYSKCGHIE 333
>gi|356496086|ref|XP_003516901.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31920-like [Glycine max]
Length = 605
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 239/448 (53%), Gaps = 11/448 (2%)
Query: 21 LLHRLCKTHTFRK-HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHM 79
LL R F+K H I F D+ + + LS+ ++ I+ I
Sbjct: 37 LLKRCKSMEEFKKVHAHILKLGLFYDSFCGSNLVASCALSRWGSMEYACSIFRQI----- 91
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
+F +N +IR ++AL +Y+ M G+ PD +T P VLKA L AL+
Sbjct: 92 --EEPGSFEYNTMIRGNVNSMDLEEALLLYVEMLERGIEPDNFTYPFVLKACSLLVALKE 149
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G Q+H+ GLE + F ++G IS+Y K G E A VF++ E+ + SW++II +
Sbjct: 150 GVQIHAHVFNAGLEVDVFVQNGLISMYGKCGAIEHAGVVFEQMDEKSVASWSSIIGAHAS 209
Query: 200 DGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
E + + + + G ++ +VS SAC LG L +H + +++ + +
Sbjct: 210 VEMWHECLMLLGDMSREGRHRAEESILVSALSACTHLGSPNLGRCIHGIL--LRNISELN 267
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
++ SLIDMY KCG ++ VF + N S+T MI G A +G EAL F M E
Sbjct: 268 VVVKTSLIDMYVKCGSLEKGLCVFQNMAHKNRYSYTVMIAGLAIHGRGREALRVFSDMLE 327
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
G+ P+ V +VGVLSAC H G V+EG F M+ + I+P HYGCMVDL+GRAG+L+
Sbjct: 328 EGLTPDDVVYVGVLSACSHAGLVKEGFQCFNRMQFEHMIKPTIQHYGCMVDLMGRAGMLK 387
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA +++ MP+K N V+W L+ AC+ N+++GE A ++ +L + G Y+VL+N+YA
Sbjct: 388 EAYDLIKSMPIKPNDVVWRSLLSACKVHHNLEIGEIAADNIFKLNKHNPGDYLVLANMYA 447
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYSL 466
W V RIR M +NL + P +SL
Sbjct: 448 RAQKWANVARIRTEMVEKNLVQTPGFSL 475
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 224/407 (55%), Gaps = 10/407 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC L +++ I R +++ WN++I Y+ K ++++ M G+ P
Sbjct: 446 KCGCLEMAKEVFEQIQRKNVVS-------WNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
TL +L A + L++G+ +H +R +E++ F S I LY K G+ A VF
Sbjct: 499 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 558
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
P+ + SWN +I+G + G EA+ +F ++K G +PD +T SV AC L LE
Sbjct: 559 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 618
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
++H ++ ++SK + + +++ +L+DMY KCG +D A +F ++ + + SWTSMI
Sbjct: 619 KGKEIHNFI--IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 676
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y ++G A EAL F M++S +P+ VTF+ +LSAC H G V EG ++F M Y +P
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMP-MKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
HY C++DLLGR G L EA +++ P ++ +V + L AC + +GE + +
Sbjct: 737 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 796
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L E +P Y++LSN+YAS W+EV ++R +K L K P S
Sbjct: 797 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 843
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 167/298 (56%), Gaps = 11/298 (3%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD +T P VLKA L + G+ +H+ ++ G + S + +Y+K FE A K+
Sbjct: 296 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKL 355
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE PER + SWN +I+ QDG+ ++A+++F +K GF+PD VT+ +V S+C L DL
Sbjct: 356 FDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDL 415
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E ++H + V+S D + ++L+DMYGKCG +++A +VF +I + NV SW SMI
Sbjct: 416 ERGKEIHMEL--VRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQI 357
GY+ G + ++ F M E GIRP T +L AC +Q GK +++N ++
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN--RV 531
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
E ++DL + G + A + + MP K NVV W ++ G VK+G ++
Sbjct: 532 EADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMIS-----GYVKVGSYL 583
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 172/314 (54%), Gaps = 4/314 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WNN+I Y + P+KAL+++ M +G PD TL V+ + +L LE G+++H V
Sbjct: 367 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 426
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G + F S + +Y K G E A++VF++ + + SWN++IAG S G +K I+
Sbjct: 427 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 486
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P T+ S+ AC +L+L +H Y+ ++++ ++D + +SLID+
Sbjct: 487 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYI--IRNRVEADIFVNSSLIDL 544
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + NV SW MI GY G EAL F MR++G++P+ +TF
Sbjct: 545 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 604
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VL AC +++GK + ++E G ++D+ + G ++EA + +P
Sbjct: 605 TSVLPACSQLAVLEKGKEIHNFIIE-SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 663
Query: 389 MKANVVIWGCLMGA 402
+ + V W ++ A
Sbjct: 664 ER-DFVSWTSMIAA 676
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 151/282 (53%), Gaps = 14/282 (4%)
Query: 136 ALE--IGRQLHSLAVRLGLESN-EFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSW 190
ALE +G+ +H V LGL++N C+S I+LY F+ A+ VF ENP + W
Sbjct: 208 ALEELLGKLIHQKIVSLGLQNNITLCKS-LINLYFSCHLFQSAKLVFQTIENP-LDITLW 265
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
N ++A +++ E +++F L + +PD T SV AC LG + VH +V
Sbjct: 266 NGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHV- 324
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+KS D ++++S + MY KC + A K+F E+ + +V+SW ++I Y +G +A
Sbjct: 325 -IKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKA 383
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMV 368
L+ F M+ SG +P+ VT V+S+C ++ GK E++++ + ++ + +V
Sbjct: 384 LELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS--SALV 441
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
D+ G+ G LE A+ + E + K NVV W ++ G+ K
Sbjct: 442 DMYGKCGCLEMAKEVFEQIQRK-NVVSWNSMIAGYSLKGDSK 482
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 212/410 (51%), Gaps = 34/410 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +I + R +A ++ M+RAG P T VL A + + +G Q+H
Sbjct: 112 WNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRV 171
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFD--------------------------- 180
V G+ + E+ + +Y++ D E A K+FD
Sbjct: 172 VGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEAR 231
Query: 181 ----ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
PER SW A+I G Q R +EA++MF ++ D+ TMVSV +AC LG
Sbjct: 232 DLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLG 291
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE+ V V+ + K D + N+LIDMY KCG ++ A VF ++ + +WT++
Sbjct: 292 ALEMGEWVR--VYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAI 349
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I+G A NG EA++ FH M P+ VTF+GVL+AC H G V +G+ FF M+ Y
Sbjct: 350 ILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYN 409
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I P HYGC++DL GRAG + EA ++ MPM N IWG L+ AC GN ++GE V
Sbjct: 410 IAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVT 469
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ L +++P + Y +LSNIYA WE+V R+R + + + K P SL
Sbjct: 470 ERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSL 519
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 99 LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFC 158
+ A + A+ Y M G +PD YT P +LKA + + R +H+ V+ G+ N
Sbjct: 21 VAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHV 80
Query: 159 ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
+ ++ Y+ GD AR + E WNA+I+G ++ R EA F+ + + G
Sbjct: 81 ATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGA 140
Query: 219 EPDDVTMVSVTSACG-SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
P VT VSV SACG GD+ L +QVH V V S D + N+L+DMY +C M+
Sbjct: 141 APTPVTYVSVLSACGKGTGDVLLGMQVHGRV--VGSGVLPDLRVENALVDMYAECADMES 198
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A+K+F + +V SWTS++ G G +EA D F M E + V++ ++ V
Sbjct: 199 AWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER----DTVSWTAMIDGYVQ 254
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
+ +E F M+ F MV ++
Sbjct: 255 AARFREALEMFREMQCSNVSADEFT----MVSVI-------------------------- 284
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYV--VLSNIYASRGLWEEVERIRAVMKH 455
AC + G ++MGEWV ++ D A+V L ++Y+ G E + M H
Sbjct: 285 ---TACAQLGALEMGEWVRVYMSRQGIKMD-AFVGNALIDMYSKCGSIERALDVFKDMHH 340
Query: 456 RN 457
R+
Sbjct: 341 RD 342
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 228/412 (55%), Gaps = 11/412 (2%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAFH---------WNNIIRLYTRLEAPKKALDIYIFMS 113
N++ N + ++R M+ F W ++ +T+ +AL+ + M
Sbjct: 205 NVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMR 264
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ D YT +L A L ALE G+Q+H+ +R + N F S + +YSK +
Sbjct: 265 FQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIK 324
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
A F + + SW A+I G Q+G ++EA+ +F +++ G +PDD T+ SV S+C
Sbjct: 325 PAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCA 384
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+L LE Q H + S + N+L+ +YGKCG ++ A+++F E+ + SW
Sbjct: 385 NLASLEEGAQFH--CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSW 442
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
T+++ GYA G A E +D F M ++P+ VTF+GVLSAC G V++G +F M+
Sbjct: 443 TALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQK 502
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
+ I P HY CM+DL R+G L+EA ++ MPM + + WG L+ AC G++++G+
Sbjct: 503 DHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQ 562
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
W A++L E++P + +YV+L +++A++G W +V ++R M+ R + K P S
Sbjct: 563 WAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCS 614
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 177/394 (44%), Gaps = 54/394 (13%)
Query: 63 NLLQLNQIYAHIIRTHMLHSYSAAF---------HWNNIIRLYTRLEAPKKALDIYIFMS 113
NL N + + + +L + F +N +I ++ A +A+ +Y +
Sbjct: 71 NLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLL 130
Query: 114 RAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
RAG V P T+ ++ A+ L +GRQ H +RLG N F S + +Y+K G
Sbjct: 131 RAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGL 190
Query: 172 FEKARKVFDE-------------------------------NPERKLGSWNAIIAGLSQD 200
A++VFDE +R +W ++ G +Q+
Sbjct: 191 IGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQN 250
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G +A++ F ++ G D T S+ +ACG+L LE Q+H Y+ +++ +
Sbjct: 251 GLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI--IRTHYDDNVF 308
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ ++L+DMY KC + A F + N+ SWT++IVGY NG + EA+ F M+ G
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGL 376
I P+ T V+S+C + ++EG F + + HY +V L G+ G
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQF-----HCLALVSGLMHYITVSNALVTLYGKCGS 423
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+E+A + + M + + V W L+ +FG K
Sbjct: 424 IEDAHRLFDEM-LFHDQVSWTALVTGYAQFGRAK 456
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 123/303 (40%), Gaps = 68/303 (22%)
Query: 162 FISLYSKAGDFEKARKVFDENP-------------------------------ERKLGSW 190
++ Y KAG +AR+VFD P +R S+
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCG--FEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
NA+IAG S G A+ ++ L + G P +TM ++ A +LGD L Q H +
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS----------------- 291
++ + + + L+ MY K G + A +VF E+D NV
Sbjct: 167 LRLGFG--VNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224
Query: 292 --------------SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
+WT+M+ G+ NGL ++AL+ F MR GI + TF +L+AC
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
+++GK + + + F +VD+ + ++ A M K N++ W
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVG-SALVDMYSKCRSIKPAETAFRRMSCK-NIISWT 342
Query: 398 CLM 400
L+
Sbjct: 343 ALI 345
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 194/317 (61%), Gaps = 4/317 (1%)
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLGL+S F I +YSK G EKA K+ D E+ + SWNAII+G S +++EA
Sbjct: 460 RLGLDS--FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQK 517
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + + G +PD+ T ++ C +L +EL Q+H + +K + +SD + ++L+DM
Sbjct: 518 TFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQI--IKKELQSDAYISSTLVDM 575
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG M +F + + +W +M+ GYA +GL EAL F YM+ ++PNH TF
Sbjct: 576 YSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATF 635
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL AC H G V++G H+F M + Y ++P+ HY C+VD++GR+G + +A ++EGMP
Sbjct: 636 LAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP 695
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+A+ VIW L+ C+ GNV++ E A + +LEP AYV+LSNIYA+ G+W EV +
Sbjct: 696 FEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTK 755
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ L K P S
Sbjct: 756 LRKMMRFNGLKKEPGCS 772
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 183/386 (47%), Gaps = 27/386 (6%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y +K +D+++ M R G + D T +VLK+ L G Q+H LAV
Sbjct: 142 WNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAV 201
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G + + S + +Y+K + + + F PE+ SW+AIIAG Q+ + ++
Sbjct: 202 KMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLE 261
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G T SV +C L L L Q+H + +K+ +D ++ + +DM
Sbjct: 262 LFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHA--LKTDFGTDVVIGTATLDM 319
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC + A K+F + N+ S+ ++IVGYA + + G+ + V+
Sbjct: 320 YMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS--------------DKGLGLDEVSL 365
Query: 329 VGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
G AC EG + MK++ Q A+ ++D+ G+ G L EA + E M
Sbjct: 366 SGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN--AILDMYGKCGALVEACLVFEEM 423
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP---WSDGAYVVLSNIYASRGLWE 444
+ + V W ++ A E+ GN + + H + ++ + L ++Y+ G+ E
Sbjct: 424 -VSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMME 482
Query: 445 EVERIRAVMKHRNL----AKIPAYSL 466
+ E++ + + + A I +SL
Sbjct: 483 KAEKLHDRLAEQTVVSWNAIISGFSL 508
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 2/170 (1%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+ GD A+K+FD PER + SWN++I+G +G ++ ID+F+ + + G D T
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V +C SL D +Q+H VK D + ++L+DMY KC ++D + + F +
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHG--LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSM 235
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
+ N SW+++I G N L+ F M+++G+ + TF V +C
Sbjct: 236 PEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 66/370 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ II + + + L+++ M +AGV T V ++ L AL +G QLH A+
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR------ 202
+ ++ + + +Y K + A+K+F+ P L S+NAII G ++ +
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDE 362
Query: 203 -------------------------------------AKEAIDMFIGLKKCG-------- 217
A +DM+ KCG
Sbjct: 363 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMY---GKCGALVEACLV 419
Query: 218 FEP----DDVTMVSVTSACGSLGDLE--LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
FE D V+ ++ +A G+ E L+L +H + +KS+ D+ + +LIDMY K
Sbjct: 420 FEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRI--IKSRLGLDSFVGIALIDMYSK 477
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG M+ A K+ + + V SW ++I G++ + EA F M E G+ P++ T+ +
Sbjct: 478 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 537
Query: 332 LSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
L C + V+ GK +++K Q + + +VD+ + G +++ + + E P +
Sbjct: 538 LDTCANLVTVELGKQIHAQIIKKELQSDAYIS--STLVDMYSKCGNMQDFQLIFEKAPNR 595
Query: 391 ANVVIWGCLM 400
+ V W ++
Sbjct: 596 -DFVTWNAMV 604
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN II ++ + ++A + M GV PD +T +L L +E+G+Q+H+ +
Sbjct: 499 WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQII 558
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ L+S+ + S + +YSK G+ + + +F++ P R +WNA++ G +Q G +EA+
Sbjct: 559 KKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALK 618
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSLI 266
+F ++ +P+ T ++V ACG +G +E L Y + S D + + ++
Sbjct: 619 IFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH---YFHSMLSNYGLDPQLEHYSCVV 675
Query: 267 DMYGKCGRMDLAYKV 281
D+ G+ G++ A ++
Sbjct: 676 DIMGRSGQVSKALEL 690
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
DLE A +V + Q DT+ N+++ Y G + +A K+F + + +V SW S+
Sbjct: 92 DLEFAFKVFDGMPQ------RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSL 145
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV----HGGKVQEGKHFFEMMK 352
I GY NG + +D F M G + TF VL +C HGG +Q +M
Sbjct: 146 ISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKM-- 203
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ ++D+ + L+ + MP K N V W ++ C + +++ G
Sbjct: 204 ---GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NWVSWSAIIAGCVQNDDLRGG 259
Query: 413 EWVAKHLQE 421
+ K +Q+
Sbjct: 260 LELFKEMQK 268
>gi|449498539|ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 464
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 228/435 (52%), Gaps = 19/435 (4%)
Query: 42 SFLDTHEDPAKIVATQLSKCTNLLQLNQIYAH--IIRTHMLHSYSAAFHW---------- 89
S T P I Q L + + AH I H LH +AF +
Sbjct: 17 SIFTTSLSPLHIPQIQAQLILQNLHSHPLIAHHFINTCHHLHLLGSAFLFFTHIPKPHVF 76
Query: 90 --NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N++IR ++ + P L +Y M+R + P+ YT P VLK+ L G+ +H+
Sbjct: 77 ICNSLIRAFSHSKIPHTPLFLYTHMNRNSISPNNYTFPFVLKSLADFKDLVGGQSVHTHV 136
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ G S+ + ++ + +Y+ G +KVFDE + SW +I G +A+
Sbjct: 137 VKSGHASDLYVQNTLMDVYASCGKMGLCKKVFDEMLHTDVVSWTILIMGYRVSFMLDDAL 196
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ-KSDTLMLNSLI 266
+F ++ G +P+ VT+V+ +AC S G +E+ + +H++V K+K+ + D ++ +LI
Sbjct: 197 IVFEQMQYAGVDPNRVTIVNALAACASFGAIEMGVWIHEFV---KTKRWEVDVVLGTALI 253
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCGR+ A VF + + NV +W I G A+ EA+ F M E G+ + V
Sbjct: 254 DMYGKCGRIKEALAVFQAMKEKNVYTWNVFINGLASAKCGEEAIAWFKRMDEEGVEADDV 313
Query: 327 TFVGVLSACVHGGKVQEGKH-FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T V VLSAC H G V G+ F+ ++ + P HY CMVD+L R G +EEA M+
Sbjct: 314 TLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDILARNGCIEEACVMIN 373
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP +A +WG L+ G++++ E A+ L E+EP + G YVVLSNIYA G W E
Sbjct: 374 DMPFEATRSMWGSLLTGSRAHGSLEVSEIAARKLVEMEPENGGYYVVLSNIYAEMGKWSE 433
Query: 446 VERIRAVMKHRNLAK 460
VE++R +MK R L K
Sbjct: 434 VEKVREIMKERGLKK 448
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 226/453 (49%), Gaps = 75/453 (16%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+F N ++R Y +A+D+YI+M R GV + +T P VLK G +H
Sbjct: 97 SFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHG 156
Query: 146 LAVRLGLESNEF-------------------------------CESGFISLYSKA----- 169
VR G S+ F C + I+LY +A
Sbjct: 157 QVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLK 216
Query: 170 ------------------------------GD----FEKARKVFDENPERKLGSWNAIIA 195
GD +AR VFD ER SWN++++
Sbjct: 217 ALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLS 276
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +Q+GR +A+ +F ++ +P+ VT + + SAC LG L ++H +V + SK
Sbjct: 277 GYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFV--ISSKM 334
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVF--WEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
DT + N+++DMY KCG +D A ++F E+ + +VSSW +I GY +G EAL+ F
Sbjct: 335 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 394
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M+ G+ PN +TF +LSAC H G + EG+ F M + + P HY CMVD+LGR
Sbjct: 395 SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGR 453
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVL 433
AG L EA +++ +P + + +WG L+ AC GN ++GE A +L +LEP G YV++
Sbjct: 454 AGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLM 513
Query: 434 SNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
SNIYA+ W+EVE +R MK R L K A+S+
Sbjct: 514 SNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 546
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 93/194 (47%), Gaps = 17/194 (8%)
Query: 162 FISLYSKAGDFEKARKVFD----------ENPERKLGSWNAIIAGLSQDGRAKEAIDMFI 211
I LYSK GD AR +FD + P L N ++ + GR+ EAID++I
Sbjct: 64 LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFL--CNTMLRAYANAGRSYEAIDLYI 121
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
+++ G ++ T V C S VH V V++ SD + +L+DMY K
Sbjct: 122 YMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQV--VRTGFGSDLFVEAALVDMYAK 179
Query: 272 CGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGV 331
CG + A++VF + +V WT+MI Y +AL F M+E G + +T + V
Sbjct: 180 CGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISV 239
Query: 332 LSACVHGGKVQEGK 345
SA G++ +G+
Sbjct: 240 ASAV---GQLGDGR 250
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 220/423 (52%), Gaps = 33/423 (7%)
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
R L S WN++I Y +AL+++ M R GV D T VL A L
Sbjct: 260 RIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLG 319
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA-------------------------- 169
++ G Q+H+ ++G ++ +S + +YSK
Sbjct: 320 IIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMIT 379
Query: 170 -----GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
G + AR++FD P + L SWN++I G SQ+ EA+D+F + K G D +
Sbjct: 380 VYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFS 439
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ V SAC S+ LEL Q+ + + D ++ SL+D Y KCG ++ K+F
Sbjct: 440 LAGVISACASISSLELGEQIFARATIIG--LEFDQIISTSLVDFYCKCGLVEHGRKLFDR 497
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ + + W SM++GYA NG EAL+ F MR G++P +TFVGVLSAC H G V+EG
Sbjct: 498 MMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEG 557
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ +F MK Y I P HY CMVDL RAGLLE+A ++E MP+KA+ +W ++ C
Sbjct: 558 RKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCV 617
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
GN +G+ VAK + +L+P + GAYV LS IYA+ W ++R +M + + K ++
Sbjct: 618 AHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSF 677
Query: 465 SLA 467
+A
Sbjct: 678 DIA 680
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 203/373 (54%), Gaps = 2/373 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I + AL ++ M G PD +T+ V+ L LE G Q+ +L +
Sbjct: 909 WNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCI 968
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R+G SN S I L+SK E + +VF+E + NA+I+ + G + A+
Sbjct: 969 RVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQ 1028
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + P + T+ V SA L ++ Q+H V VKS +SD ++ +SL++M
Sbjct: 1029 LFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLV--VKSGLESDVIVASSLVEM 1086
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +D A K F +I ++ SW +MI+G A NG ++AL+ F + G P+ +T
Sbjct: 1087 YAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITL 1146
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
GVL AC GG V EG F M+ Y + P HY C+VD++ R G L+EA +VE MP
Sbjct: 1147 AGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMP 1206
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + +IWG L+ ACE +G+++ E VA+ + ELEP S Y+VL+ Y RG WE + R
Sbjct: 1207 HEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVR 1266
Query: 449 IRAVMKHRNLAKI 461
+ MK + + K+
Sbjct: 1267 VXRAMKEKGVRKV 1279
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 173/375 (46%), Gaps = 65/375 (17%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGV---LPDCYTLPIVLKASCQLFALEIGRQLHS 145
WN++I Y PK+A+ ++ +S + D + L V+ A L AL+ G+Q+H+
Sbjct: 138 WNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHA 197
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD----------------------ENP 183
V +E + S ++LY K GD + A V + N
Sbjct: 198 RIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMND 257
Query: 184 ERKLGS---------WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
R++ WN++I+G + A EA+++F +++ G + D T SV SAC +
Sbjct: 258 ARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACST 317
Query: 235 LGDLELALQVHKYVFQV-----------------------------KSKQKSDTLMLNSL 265
LG ++ +QVH +V++V Q DT++LNS+
Sbjct: 318 LGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSM 377
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I +Y CGR+D A ++F + ++ SW SMIVG++ N EALD F M + G+R +
Sbjct: 378 ITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDK 437
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+ GV+SAC ++ G+ F + +E +VD + GL+E R + +
Sbjct: 438 FSLAGVISACASISSLELGEQIFA-RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFD 496
Query: 386 GMPMKANVVIWGCLM 400
M MK++ V W ++
Sbjct: 497 RM-MKSDEVPWNSML 510
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 171/360 (47%), Gaps = 75/360 (20%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIR---THMLHSYSAAFH-----WNNIIRL 95
LD H +A QL C N Y I R H+L S H N ++++
Sbjct: 4 LDLHS-----LARQLGSCNN-------YGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQM 51
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL-ES 154
Y+R + ++A ++ M + +C++ +++ L+ G + SL + +
Sbjct: 52 YSRCNSMREAQQLFEEMPKR----NCFSWNTMIEG-----YLKSGSKGKSLELFDSMPHK 102
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL- 213
+ F + IS ++K G+ E AR++F+E P + +WN++I G + +GR KEA+ +F L
Sbjct: 103 DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLS 162
Query: 214 -----KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ CG D + +V AC +LG L+ Q+H + V + + D+++ +SL+++
Sbjct: 163 LNPLERFCG---DTFVLATVVGACTNLGALDCGKQIHARI--VVDEVEFDSVLGSSLVNL 217
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSS-------------------------------WTSMI 297
YGKCG +D A V + +P+ S W SMI
Sbjct: 218 YGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMI 277
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY AN A EAL+ F+ MR G++ ++ TF VLSAC G + +G ++ +VY++
Sbjct: 278 SGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQG---IQVHAHVYKV 334
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 161/367 (43%), Gaps = 25/367 (6%)
Query: 27 KTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAA 86
THTF + + S L T D ++ + K NL+ N +R L
Sbjct: 742 NTHTFLGNRCLDLYSQ-LGTGNDSLRVFEDIIDK--NLISWNIFLKAFVRFGELERARDV 798
Query: 87 FH---------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLK---ASCQL 134
F WN +I Y A + M +AG+ P +T +L ++C+
Sbjct: 799 FDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACR- 857
Query: 135 FALEIGRQLHSLAVRLGLE-SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
G+Q+H+ +R G++ SN + I +Y K G + A VF E + SWN++
Sbjct: 858 -----GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSL 912
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I + G A+ F+ ++ G+ PD T+ +V + C +L DLE Q+ + ++
Sbjct: 913 IWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQI--FALCIRV 970
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
S++++ ++ ID++ KC R++ + +VF EI Q + +MI YA +G AL F
Sbjct: 971 GFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLF 1030
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
+RP T VLSA V +G ++ +E +V++ +
Sbjct: 1031 VLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVK-SGLESDVIVASSLVEMYAK 1089
Query: 374 AGLLEEA 380
GL++ A
Sbjct: 1090 FGLIDSA 1096
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 111/228 (48%), Gaps = 13/228 (5%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
F+ + + G+ E+AR VFDE P+R + SWN +I+G G +A F ++K G P
Sbjct: 782 FLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPS 841
Query: 222 DVTMVS----VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
T + V+SAC Q+H + + S+ ++ NSLI MYGK G +D
Sbjct: 842 GFTYSTLLSFVSSAC-------RGKQIHASMIR-NGVDLSNVVVGNSLIGMYGKFGVVDY 893
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A+ VF +++ ++ SW S+I +G N AL F MR G P+ T V++ C +
Sbjct: 894 AFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSN 953
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+++G+ F + V + +DL + LE++ + E
Sbjct: 954 LQDLEKGEQIFALCIRVGFLSNSIVS-SASIDLFSKCNRLEDSVRVFE 1000
>gi|115444423|ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|49388051|dbj|BAD25165.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388408|dbj|BAD25541.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535522|dbj|BAF07905.1| Os02g0164600 [Oryza sativa Japonica Group]
gi|125538213|gb|EAY84608.1| hypothetical protein OsI_05976 [Oryza sativa Indica Group]
gi|125580926|gb|EAZ21857.1| hypothetical protein OsJ_05503 [Oryza sativa Japonica Group]
gi|215737275|dbj|BAG96204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 476
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 215/379 (56%), Gaps = 11/379 (2%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N++IR P+ AL ++ M GV D YTLP ++ A C + LH
Sbjct: 91 FSFNSLIRA----SPPRLALQLFDQMRHRGVTTDRYTLPFLIHA-CSSGDRPLCESLHGQ 145
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE-KARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++RLG S F ++ ++ Y A FE AR+VFDE + + +W +++G G
Sbjct: 146 SLRLGYSSVLFTQTALMNAYF-ACRFEVAARRVFDEMQAKDVVAWTGMVSGYVDSGMFLR 204
Query: 206 AIDMFIGLKKC--GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+++F ++ C P+ T+VSV SAC LG LE A +H YV +V + + ++ N
Sbjct: 205 GVEVFQEMRSCEEAVRPNVATVVSVASACAGLGSLEYAKGLHAYVEKVG--LEGELIVKN 262
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SLIDMYGKCG ++LA +F + Q ++ SWT+MI G A++G EA+ F M+E+G+ P
Sbjct: 263 SLIDMYGKCGSIELARGLFGLMPQKDLHSWTAMISGLASHGHGKEAVALFFSMKEAGVLP 322
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ TFV VLSAC H G V EG F M+N Y++ P HYGCMVDL RAGL+
Sbjct: 323 DSTTFVVVLSACSHAGLVDEGISIFNSMENEYKVTPDIKHYGCMVDLFSRAGLIARGYQF 382
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+E MP + N+ I G L+ AC + +GE V K ++ + GA V+LSNIYA++ LW
Sbjct: 383 IESMPFEPNLAILGALLSACSINNELDIGELVIKRIESVRSDKGGAGVLLSNIYANQNLW 442
Query: 444 EEVERIRAVMKHRNLAKIP 462
EV+ +R ++ + + P
Sbjct: 443 HEVDSLRRKIRDDTICRKP 461
>gi|147772248|emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
Length = 538
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 156/444 (35%), Positives = 239/444 (53%), Gaps = 47/444 (10%)
Query: 67 LNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPI 126
+ Q+++H+I T WN ++R Y+ P++A ++ + V P
Sbjct: 32 MQQLHSHLITTGAHSHCMDVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHVYPPLSFDSF 91
Query: 127 VL----KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
KA L E G QLH+L ++LG E + + + +++Y+ G F +A++VFDE
Sbjct: 92 SFSFLLKACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEM 151
Query: 183 PERKLGSWNAIIAGLSQDG-------------------------------RAKEAIDMFI 211
P R +WN I GL++ G + K+A+ +F+
Sbjct: 152 PVRNSVTWNVFITGLAKWGELHLARSLLDEMPMPTVVSWTTIIDGYTRMNQPKQALALFL 211
Query: 212 GL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
+ G +P ++T++++ A +LG LE+ +H Y + SD + SL+D Y
Sbjct: 212 TMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYG-EKSGLNASDIRIRTSLLDTYA 270
Query: 271 KCGRMDLAYKVFWEIDQP--NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
KCG ++ A +VF EID N+ SWTS+I +A +G+A EAL+ F M++ ++PN +TF
Sbjct: 271 KCGCIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMAKEALENFERMQKECLKPNRITF 330
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC HGG V+EG FF M N YQI P HYGC++D+LGRAG L+EA M +P
Sbjct: 331 LSVLNACSHGGLVEEGLKFFTKMVNKYQISPDVKHYGCLIDMLGRAGRLDEAEKMALEIP 390
Query: 389 -MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
NVVIW L+GAC GNV+MG V + + E+E G YV+LSNI+A G + +VE
Sbjct: 391 NYVVNVVIWRTLLGACSFHGNVEMGARVTRKILEMEKKYGGDYVLLSNIFAGVGRFWDVE 450
Query: 448 RIRAVMKHRN-------LAKIPAY 464
R+R +M RN + K+PAY
Sbjct: 451 RVRRLMDERNASKAVNMVKKMPAY 474
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/439 (33%), Positives = 231/439 (52%), Gaps = 17/439 (3%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAF 87
H F S F +T D SKC +L ++ + S +
Sbjct: 318 VHCFGVKACFSREDRFCNTLLD-------MYSKCGDLDSAKVVFREM-------SGRSVV 363
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
+ ++I Y R +A+ ++ M G+ PD YT+ VL + L+ G+++H
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWI 423
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + F + + +Y+K G +A VF E + + SWN +I G S++ A EA+
Sbjct: 424 KENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEAL 483
Query: 208 DMF-IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F + L + F PD+ T+ V AC SL + ++H Y+ +++ SD + NSL+
Sbjct: 484 SLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYI--MRNGYFSDRHVANSLV 541
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KCG + LA +F +I ++ SWT MI GY +G EA+ F+ MR++GI P+ +
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEI 601
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+FV +L AC H G V EG FF +M++ +IEP HY C+VD+L R G L +A +E
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIEN 661
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP+ + IWG L+ C +VK+ E VA+ + ELEP + G YV+++NIYA WEEV
Sbjct: 662 MPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEV 721
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+R+R + R L K P S
Sbjct: 722 KRLRKRIGQRGLRKNPGCS 740
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 168/352 (47%), Gaps = 11/352 (3%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
+A + C +L + ++++ + A WN ++ + ++ ++ M
Sbjct: 135 LALMYTNCGDLKEASRVFDQV-------KIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
+GV D YT V K+ L ++ G QLH ++ G + ++ Y K +
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVD 247
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
ARKVFDE ER + SWN+II G +G A++ + +F+ + G E D T+VSV + C
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCA 307
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+ L VH F VK+ + N+L+DMY KCG +D A VF E+ +V S+
Sbjct: 308 DSRLISLGRAVH--CFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSY 365
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
TSMI GYA GLA EA+ F M E GI P+ T VL+ C + EGK E +K
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE 425
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F M D+ + G + EA + M +K +++ W ++G K
Sbjct: 426 NDMGFDIFVSNALM-DMYAKCGSMREAELVFSEMRVK-DIISWNTVIGGYSK 475
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 164/346 (47%), Gaps = 15/346 (4%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D TL VL+ +L+ G+++ + G + S +Y+ GD ++A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D+ K WN ++ L++ G +I +F + G E D T V+ + SL +
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H Y+ + +++ + NSL+ Y K R+D A KVF E+ + +V SW S+I G
Sbjct: 213 GGEQLHGYILKSGFGERNS--VGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQI 357
Y +NGLA + L F M SGI + T V V + C + G+ H F +K +
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFG-VKACFSR 329
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
E RF + ++D+ + G L+ A+ + M ++ VV + ++ + G GE V K
Sbjct: 330 EDRFCN--TLLDMYSKCGDLDSAKVVFREMSGRS-VVSYTSMIAGYAREG--LAGEAV-K 383
Query: 418 HLQELEP--WSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
+E+E S Y V + N A L +E +R+ +K ++
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMG 429
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 233/452 (51%), Gaps = 13/452 (2%)
Query: 18 SHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL----SKCTNLLQLNQIYAH 73
+ P + + C HV +S S + T D V T L SK L +++
Sbjct: 103 TFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDE 162
Query: 74 IIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
I +++ W II Y +AL ++ + G+ PD +TL +L A +
Sbjct: 163 IPEKNVVS-------WTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSR 215
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
+ L GR + G N F + + +Y+K G E+AR+VFD E+ + W+A+
Sbjct: 216 VGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSAL 275
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I G + +G KEA+D+F +++ PD MV V SAC LG LEL
Sbjct: 276 IQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARG--LMDGD 333
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ S+ ++ +LID Y KCG + A +VF + + + + ++I G A G A F
Sbjct: 334 EFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVF 393
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M + G++P+ TFVG+L C H G V +G +F M +V+ + P HYGCMVDL R
Sbjct: 394 GQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQAR 453
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVL 433
AGLL EA+ ++ MPM+AN ++WG L+G C + ++ E V K L ELEPW+ G YV+L
Sbjct: 454 AGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLL 513
Query: 434 SNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
SNIY++ W+E E+IR+ + + + K+P S
Sbjct: 514 SNIYSASHRWDEAEKIRSSLNQKGMQKLPGCS 545
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 175/333 (52%), Gaps = 8/333 (2%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YA ++ H F +N +IR +A + A+ +Y M + G PD +T P VLKA
Sbjct: 53 YATVVFAQTPHP--NIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKA 110
Query: 131 SCQL-FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS 189
+L +G LHSL ++ G + + F ++G + LYSK G ARKVFDE PE+ + S
Sbjct: 111 CTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVS 170
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
W AII G + G EA+ +F GL + G PD T+V + AC +GDL + Y+
Sbjct: 171 WTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMR 230
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+ S + + SL+DMY KCG M+ A +VF + + +V W+++I GYA+NG+ EA
Sbjct: 231 E--SGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEA 288
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK-NVYQIEPRFAHYGCMV 368
LD F M+ +RP+ VGV SAC G ++ G +M + + P ++
Sbjct: 289 LDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGT--ALI 346
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
D + G + +A+ + +GM K VV + G
Sbjct: 347 DFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISG 379
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 137/270 (50%), Gaps = 9/270 (3%)
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFI--SLYSKAGDFEKARKVFDENPERKLGSWN 191
L +L +Q H L +RLGL + + + + SL+ A + A VF + P + +N
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQY--ATVVFAQTPHPNIFLYN 70
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQ 250
+I G+ + ++A+ ++ +++ GF PD+ T V AC L + L +H V
Sbjct: 71 TLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLV-- 128
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+K+ D + L+ +Y K G + A KVF EI + NV SWT++I GY +G EAL
Sbjct: 129 IKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEAL 188
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F + E G+RP+ T V +L AC G + G+ M+ + F +VD+
Sbjct: 189 GLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATS-LVDM 247
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G +EEAR + +GM ++ +VV W L+
Sbjct: 248 YAKCGSMEEARRVFDGM-VEKDVVCWSALI 276
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 208/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y KAL +YI M +G + TL KA+ L L+ G+Q+ ++ V
Sbjct: 1077 WNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVV 1136
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + F SG + +Y K G+ E AR++F+E P +W +I+G ++G+ + A+
Sbjct: 1137 KRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALF 1196
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ +PD+ T ++ AC L LE Q+H VK D ++ SL+DM
Sbjct: 1197 TYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANT--VKLNCAFDPFVMTSLVDM 1254
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F + ++SW +MIVG A +G A EAL F M+ G+ P+ VTF
Sbjct: 1255 YAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTF 1314
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G V E F M+ +Y IEP HY C+VD L RAG + EA ++ MP
Sbjct: 1315 IGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMP 1374
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+A+ ++ L+ AC + + G+ VA+ L LEP AYV+LSN+YA+ WE V
Sbjct: 1375 FEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVAS 1434
Query: 449 IRAVMKHRNLAKIPAYS 465
R +M+ N+ K P +S
Sbjct: 1435 ARNMMRKANVKKDPGFS 1451
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 179/362 (49%), Gaps = 14/362 (3%)
Query: 66 QLNQIYAHIIRTHMLHSY---SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY 122
QL Q+ A+ + M S WN + + + +A+D ++ M + V D
Sbjct: 848 QLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL 907
Query: 123 TLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
T ++L L LE+G+Q+H + VR GL+ + I++Y K G +AR VF +
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL-GDLELA 241
E L SWN +I+G + G + ++ MF+ L + G PD T+ SV AC SL G LA
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
Q+H +K+ D+ + +LID+Y K G+M+ A +F D +++SW +M+ GY
Sbjct: 1028 TQIHACA--MKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYI 1085
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV--QEGKHFFE-MMKNVYQIE 358
+G +AL + M+ESG R N +T A GG V ++GK ++K + ++
Sbjct: 1086 VSGDFPKALRLYILMQESGERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLD 1143
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
F G + D+ + G +E AR + +P +V W ++ C + G + + H
Sbjct: 1144 -LFVISGVL-DMYLKCGEMESARRIFNEIPSPDDVA-WTTMISGCVENGQEEHALFTYHH 1200
Query: 419 LQ 420
++
Sbjct: 1201 MR 1202
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-- 184
+L+ + L +G++ H+ + G + F + I++YSK G ARK+FD P+
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R L +WNAI++ + +A++ +F L++ T+ V C A +
Sbjct: 692 RDLVTWNAILSAHAD--KARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H Y VK + D + +L+++Y K GR+ A +F + +V W M+ Y G
Sbjct: 750 HGYA--VKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807
Query: 305 LANEALDCFHYMRESGIRPNHVTF 328
L EAL F +G+RP+ VT
Sbjct: 808 LEYEALLLFSEFNRTGLRPDDVTL 831
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 47/324 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN I+ + + + ++ + R+ V +TL V K + LH AV
Sbjct: 697 WNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV 754
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GL+ + F +++Y+K G +AR +FD R + WN ++ G EA+
Sbjct: 755 KIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALL 814
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G PDDVT+ ++ VKSKQ L L
Sbjct: 815 LFSEFNRTGLRPDDVTLCTLARV-------------------VKSKQNVLEWQLKQL-KA 854
Query: 269 YGKCGRMDLAYKVFW---EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
YG K+F + D +V +W + + G EA+DCF M S + +
Sbjct: 855 YGT--------KLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR------FAHYGCMVDLLGRAGLLEE 379
+TFV +LS V G + E+ K ++ I R + C++++ + G +
Sbjct: 907 LTFVVMLS-------VVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSR 959
Query: 380 ARAMVEGMPMKANVVIWGCLMGAC 403
AR + M + ++V W ++ C
Sbjct: 960 ARTVFWQMN-EVDLVSWNTMISGC 982
>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Glycine max]
Length = 586
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 216/375 (57%), Gaps = 5/375 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIGRQLHSLA 147
WN +I YT ++AL+++ M G +PD YT LKA SC A E G Q+H+
Sbjct: 73 WNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGE-GMQIHAAL 131
Query: 148 VRLGLE--SNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R G + + LY K +ARKVFD E+ + SW+ +I G +Q+ KE
Sbjct: 132 IRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILGYAQEDNLKE 191
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+D+F L++ D + S+ LE Q+H Y +V ++ NS+
Sbjct: 192 AMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVA-NSV 250
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG A +F E+ + NV SWT MI GY +G+ N+A++ F+ M+E+GI P+
Sbjct: 251 LDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDS 310
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VT++ VLSAC H G ++EGK +F ++ + +I+P+ HY CMVDLLGR G L+EA+ ++E
Sbjct: 311 VTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRLKEAKNLIE 370
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP+K NV IW L+ C G+V+MG+ V + L E + YV++SN+YA G W+E
Sbjct: 371 KMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMYAHAGYWKE 430
Query: 446 VERIRAVMKHRNLAK 460
E+IR +K + L K
Sbjct: 431 SEKIRETLKRKGLKK 445
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 3/319 (0%)
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
+ + L +L + L+ G+Q+H + +LG + + I +YSK G +A +
Sbjct: 1 MSESRLLNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAAR 60
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
VF+ P R + SWNA+IAG + + +EA+++F +++ G PD T S AC
Sbjct: 61 VFNTLPVRNVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADA 120
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+Q+H + + + + + +L+D+Y KC RM A KVF I++ +V SW+++I
Sbjct: 121 AGEGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLI 180
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+GYA EA+D F +RES R + ++ +++GK V
Sbjct: 181 LGYAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYG 240
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+ ++D+ + GL EA A+ M ++ NVV W ++ K G +
Sbjct: 241 LLEMSVANSVLDMYMKCGLTVEADALFREM-LERNVVSWTVMITGYGKHGIGNKAVELFN 299
Query: 418 HLQE--LEPWSDGAYVVLS 434
+QE +EP S VLS
Sbjct: 300 EMQENGIEPDSVTYLAVLS 318
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 185/303 (61%), Gaps = 2/303 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
++ Y++ G + A K+F+E E+ + SWN++I+GL+Q+G +A+ F+ + G +PD
Sbjct: 395 VASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQ 454
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T S+C L L++ Q+H+ V +KS +D + N+LI MY KCG + A +F
Sbjct: 455 STFACGLSSCAHLAALQVGKQLHQLV--MKSGYATDLFVSNALITMYAKCGSISSAELLF 512
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ID +V SW S+I YA NG EAL FH M G+ P+ VTFVG+LSAC H G +
Sbjct: 513 KDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLID 572
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+G F+ M Y IEP HY CMVDLLGRAG LEEA +V GM + AN IWG L+GA
Sbjct: 573 QGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGA 632
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GN+++ ++ A+ L E EP YV+LSN+ A G W+EV R+R +MK + K P
Sbjct: 633 CRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQP 692
Query: 463 AYS 465
+S
Sbjct: 693 GWS 695
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 104/193 (53%), Gaps = 1/193 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I T+ + AL ++ M G PD T L + L AL++G+QLH L +
Sbjct: 422 WNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVM 481
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ++ F + I++Y+K G A +F + + SWN++IA + +G +EA+
Sbjct: 482 KSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALK 541
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD+VT V + SAC +G ++ L++ K + Q + + ++D+
Sbjct: 542 LFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAE-HYACMVDL 600
Query: 269 YGKCGRMDLAYKV 281
G+ GR++ A+++
Sbjct: 601 LGRAGRLEEAFQL 613
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 129/263 (49%), Gaps = 26/263 (9%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-- 210
E N + I+ Y + G ++AR++ ++ P R + + A+I+G Q+ R +A +F
Sbjct: 292 EKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQ 351
Query: 211 IGLKKCGFEPDDV----TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I ++ DV TM++ S CG + + AL + K + K D + N+++
Sbjct: 352 ISIR-------DVVCWNTMIAGYSQCGRMDE---ALHLFKQMV------KKDIVSWNTMV 395
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y + G+MD A K+F E+ + N+ SW S+I G NG +AL F M G +P+
Sbjct: 396 ASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQS 455
Query: 327 TFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
TF LS+C H +Q GK ++ MK+ Y + ++ ++ + + G + A + +
Sbjct: 456 TFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSN--ALITMYAKCGSISSAELLFK 513
Query: 386 GMPMKANVVIWGCLMGACEKFGN 408
+ +VV W L+ A GN
Sbjct: 514 DID-HFDVVSWNSLIAAYALNGN 535
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 26/321 (8%)
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
N + IS ++K G AR++FD P+R + SWN++IA + R +EA +F +
Sbjct: 45 NTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMP 104
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
+ M++ + G L + Y K + + N+++ Y K +
Sbjct: 105 TRDLYSWTL-MITCYTRNGELAKARNLFNLLPY--------KWNPVCCNAMVAGYAKNRQ 155
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
D A ++F + ++ SW SM+ GY NG L F M E + V++ ++
Sbjct: 156 FDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDG 211
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV 394
V G + FFE + N P + M+ R G + EAR + + MP++ NVV
Sbjct: 212 FVEVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIR-NVV 265
Query: 395 IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
W ++ A + N + E ++ + E+ + ++ + N Y G +E ++ M
Sbjct: 266 AWNAMIAAYVQ--NCHVDEAISLFM-EMPEKNSISWTTVINGYVRMGKLDEARQLLNQMP 322
Query: 455 HRNLAK----IPAYSLATRLD 471
+RN+A I Y R+D
Sbjct: 323 YRNVAAQTAMISGYVQNKRMD 343
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 167/374 (44%), Gaps = 38/374 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + ++A ++ M D Y+ +++ + L R L +L
Sbjct: 80 WNSMIAAYLHNDRVEEARQLFDKMPTR----DLYSWTLMITCYTRNGELAKARNLFNL-- 133
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L + N C + ++ Y+K F++AR++FD P + L SWN+++ G +++G + +
Sbjct: 134 -LPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQ 192
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + E D V+ + +GDL + + + + +T+ +++
Sbjct: 193 FFEEMA----ERDVVSWNLMVDGFVEVGDLNSSWEFFEKI------PNPNTVSWVTMLCG 242
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ + G++ A ++F ++ NV +W +MI Y N +EA+ F M E N +++
Sbjct: 243 FARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISW 298
Query: 329 VGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
V++ V GK+ E + M +NV A M+ + +++AR +
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNV-------AAQTAMISGYVQNKRMDDARQIFNQ 351
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL--QELEPWSDGAYVVLSNIYASRGLWE 444
+ ++ +VV W ++ + G + + K + +++ W+ + YA G +
Sbjct: 352 ISIR-DVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIVSWN-----TMVASYAQVGQMD 405
Query: 445 EVERIRAVMKHRNL 458
+I MK +N+
Sbjct: 406 AAIKIFEEMKEKNI 419
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 41/219 (18%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N I GK G++D A KVF + N + SMI +A NG ++A F M + I
Sbjct: 19 NLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI- 77
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMM------------------------KNVYQIE 358
V++ +++A +H +V+E + F+ M +N++ +
Sbjct: 78 ---VSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLL 134
Query: 359 PRFAHYGC---MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
P + C MV + +EAR + + MP K ++V W ++ + G +++G
Sbjct: 135 PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK-DLVSWNSMLTGYTRNGEMRLGLQF 193
Query: 416 AKHLQELE--PWS---DGAYVVLSNIYASRGLWEEVERI 449
+ + E + W+ DG +V + ++ +S WE E+I
Sbjct: 194 FEEMAERDVVSWNLMVDG-FVEVGDLNSS---WEFFEKI 228
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 225/442 (50%), Gaps = 68/442 (15%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSR------AGVLPDCYTLPI-------------- 126
F +N +IR AP+ A+ IY M+R GV PD T P
Sbjct: 74 FMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFVLRACAAMGASETG 133
Query: 127 ------VLKASCQ--LFALEIGRQLHSLAVRLGLESNEFCE-------------SGF--- 162
V+KA C+ F +H+ LG + F SGF
Sbjct: 134 AQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDAVAWSAMISGFARR 193
Query: 163 ------------------------ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
I+ Y+K GD AR++FD P+R + SWNA+I+G
Sbjct: 194 GDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGYV 253
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
+ G K+A+++F ++ G +PD VTM+S+ SAC GD++ ++H+++ S+
Sbjct: 254 RCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSGRFSRIGPS 313
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T++ N+LIDMY KCG M A +VFW + NVS+W S+I G A +G EA+D F M +
Sbjct: 314 TVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAIDVFQKMLQ 373
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
++P+ +TFV VL AC HGG V +G +F +M+ Y IEP HYGCMVD+L RAGLL+
Sbjct: 374 GNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLK 433
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA + M ++ N VIW L+GAC G +++ E + L + + G +V+LSNIYA
Sbjct: 434 EAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKARSDASGDFVLLSNIYA 493
Query: 439 SRGLWEEVERIRAVMKHRNLAK 460
S G W E +R +M + K
Sbjct: 494 SVGEWLGSENMRKLMDDSGVNK 515
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/433 (33%), Positives = 226/433 (52%), Gaps = 9/433 (2%)
Query: 33 KHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNI 92
+ V A + L++ E + +KC +L + ++ + A +N +
Sbjct: 336 RQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDD-------AISYNAM 388
Query: 93 IRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGL 152
I Y+RL A+D++ M + P T +L S A+E+ +Q+H L V+ G
Sbjct: 389 IEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGT 448
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
+ + S I +YSK E A+ VF+ R + WNA+I GL+Q+ + +EA+ +F
Sbjct: 449 SLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQ 508
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
L+ G P++ T V++ + +L + Q H + +K+ SD + N+LIDMY KC
Sbjct: 509 LQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQI--IKAGADSDHHVSNALIDMYAKC 566
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + +F +V W SMI YA +G A EAL F M +G+ PN+VTFVGVL
Sbjct: 567 GFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVL 626
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN 392
SAC H G V EG F+ MK Y IEP HY +V+L GR+G L A+ +E MP++
Sbjct: 627 SACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPA 686
Query: 393 VVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAV 452
+W L+ AC FGNV++G + + +P G V++SNIYASRGLW + +++R
Sbjct: 687 AAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQG 746
Query: 453 MKHRNLAKIPAYS 465
M + K P YS
Sbjct: 747 MDCAGVVKEPGYS 759
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 160/303 (52%), Gaps = 9/303 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRA--GVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
W + I ++ + + A+ ++ RA G P+ + L L+A Q A+ G+Q+H +
Sbjct: 80 WGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGV 139
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AVR+GL+ N + + I+LY+K G + A VFD P + +W A+I G SQ G+ A
Sbjct: 140 AVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVA 199
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++F + G PD + S SAC +LG LE Q H Y +++ ++D ++N+LI
Sbjct: 200 LELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAV--ETDASVINALI 257
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+Y KC R+ LA K+F ++ N+ SWT+MI GY N EA+ F + + G +P+
Sbjct: 258 DLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVF 317
Query: 327 TFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+L++C + +G+ H + N +E ++D+ + L EARA+
Sbjct: 318 ACASILNSCGSLAAIWQGRQVHAHAIKAN---LESDEYVKNSLIDMYAKCEHLTEARAVF 374
Query: 385 EGM 387
E +
Sbjct: 375 EAL 377
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 166/328 (50%), Gaps = 6/328 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + +A+ ++ +S+ G PD + +L + L A+ GRQ+H+ A+
Sbjct: 284 WTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAI 343
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ LES+E+ ++ I +Y+K +AR VF+ E S+NA+I G S+ G AID
Sbjct: 344 KANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAID 403
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ C +P +T VS+ S +EL+ Q+H + VKS D +SLID+
Sbjct: 404 VFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLI--VKSGTSLDLYAGSSLIDV 461
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K ++ A VF + ++ W +MI G A N EA+ F+ ++ SG+ PN TF
Sbjct: 462 YSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTF 521
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V +++ + G+ F +++K + ++ ++D+ + G ++E R + E
Sbjct: 522 VALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSN--ALIDMYAKCGFIKEGRLLFES- 578
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ +V+ W ++ + G + +V
Sbjct: 579 TLGKDVICWNSMISTYAQHGQAEEALYV 606
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 133/304 (43%), Positives = 186/304 (61%), Gaps = 2/304 (0%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
I+ Y++ GD +AR FD P+R SW AIIAG +Q G +EA+ +F+ +K+ G +
Sbjct: 334 MITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLN 393
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
T S S C + LEL QVH V VK+ +S + N+L+ MY KCG +D AY V
Sbjct: 394 RSTFTSTLSTCAEIAALELGKQVHGRV--VKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
F I++ V SW +MI GYA +G EAL F M+++GI P+ VT VGVLSAC H G V
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+G +F M Y I HY CM+DLLGRAG L++A+ +++ MP + + WG L+G
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A GN ++GE AK + E+EP + G YV+LSN+YA+ G W +V R+R M+ R + K+
Sbjct: 572 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 631
Query: 462 PAYS 465
P YS
Sbjct: 632 PGYS 635
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 8/216 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ W II Y + ++AL +++ M R G + T L ++ ALE+G+Q+H
Sbjct: 359 SISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHG 418
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ GLES + + + +Y K G+ + A VF+ E+++ SWN +IAG ++ G KE
Sbjct: 419 RVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKE 478
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ---VKSKQKSDTLML 262
A+ +F +KK G PDDVTMV V SAC G ++ + + Q + + K T M
Sbjct: 479 ALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCM- 537
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
ID+ G+ GR+D A + + +P+ ++W +++
Sbjct: 538 ---IDLLGRAGRLDDAQNLMKNMPFEPDAATWGALL 570
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 30/264 (11%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E +E + IS Y++ G+ +A+++F+E+P R + +W A+++G Q+G EA +F G
Sbjct: 232 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 291
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ E + V+ ++ + ++ A + +F+ Q + N++I Y +
Sbjct: 292 MP----EKNSVSWNAIIAGYVQCKRMDQA----RELFEAMPCQNVSSW--NTMITGYAQN 341
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A F + Q + SW ++I GYA +G EAL F M+ G R N TF L
Sbjct: 342 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 401
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFA----HYGCMVD-----LLGRAGLLEEARAM 383
S C ++ GK Q+ R GC V + + G +++A +
Sbjct: 402 STCAEIAALELGK----------QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
EG+ K VV W ++ + G
Sbjct: 452 FEGIEEK-EVVSWNTMIAGYARHG 474
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 25/286 (8%)
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ AR +FD+ PER + SWNA+++G +Q+G KEA ++F + C + ++ + +
Sbjct: 126 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-PC---KNSISWNGMLA 181
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
A G +E A ++ +SK + + N ++ Y K R+ A +F + + +
Sbjct: 182 AYVQNGRIEDARRL------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 235
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW +MI GYA NG E L+ ES +R + T+ ++S V G + E + F+
Sbjct: 236 VSWNTMISGYAQNG---ELLEAQRLFEESPVR-DVFTWTAMVSGYVQNGMLDEARRVFDG 291
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M E + ++ + +++AR + E MP + NV W ++ + G++
Sbjct: 292 MP-----EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIA 345
Query: 411 MGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKH 455
A++ + P D ++ + YA G EE + MK
Sbjct: 346 Q----ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKR 387
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ +S Y++ G ++A+++FDE P + SWN ++A Q+GR ++A +F
Sbjct: 146 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLF-------ES 198
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
D ++S G + ++ + D + N++I Y + G + A
Sbjct: 199 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPER---DEVSWNTMISGYAQNGELLEAQ 255
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
++F E +V +WT+M+ GY NG+ +EA F M E N V++ +++ V
Sbjct: 256 RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCK 311
Query: 340 KVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
++ + + FE M +NV + + M+ + G + +AR + MP + + + W
Sbjct: 312 RMDQARELFEAMPCQNV-------SSWNTMITGYAQNGDIAQARNFFDRMPQR-DSISWA 363
Query: 398 CLMGACEKFG 407
++ + G
Sbjct: 364 AIIAGYAQSG 373
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 126/290 (43%), Gaps = 35/290 (12%)
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WN I ++G+ A+ +F + + ++ ++ S C S LA Q+ + +
Sbjct: 52 WNIAITNHMRNGQCDSALRLFNSMPR----RSSISWNAMISGCLSNDKFYLARQLFEKM- 106
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
D + N +I + + A +F ++ + +V SW +M+ GYA NG EA
Sbjct: 107 -----PTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEA 161
Query: 310 LDCFHYMRESGIRP--NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+ F M P N +++ G+L+A V G++++ + FE + + + CM
Sbjct: 162 KEIFDEM------PCKNSISWNGMLAAYVQNGRIEDARRLFES-----KADWELISWNCM 210
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV-AKHLQELEPWS 426
+ + L +AR + + MP + + V W ++ G + GE + A+ L E P
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPER-DEVSWNTMIS-----GYAQNGELLEAQRLFEESPVR 264
Query: 427 D-GAYVVLSNIYASRGLWEEVERIRAVMKHRNL----AKIPAYSLATRLD 471
D + + + Y G+ +E R+ M +N A I Y R+D
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMD 314
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/407 (33%), Positives = 224/407 (55%), Gaps = 10/407 (2%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC L +++ I R +++ WN++I Y+ K ++++ M G+ P
Sbjct: 254 KCGCLEMAKEVFEQIQRKNVVS-------WNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
TL +L A + L++G+ +H +R +E++ F S I LY K G+ A VF
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
P+ + SWN +I+G + G EA+ +F ++K G +PD +T SV AC L LE
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
++H ++ ++SK + + +++ +L+DMY KCG +D A +F ++ + + SWTSMI
Sbjct: 427 KGKEIHNFI--IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAA 484
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEP 359
Y ++G A EAL F M++S +P+ VTF+ +LSAC H G V EG ++F M Y +P
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMP-MKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
HY C++DLLGR G L EA +++ P ++ +V + L AC + +GE + +
Sbjct: 545 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRL 604
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L E +P Y++LSN+YAS W+EV ++R +K L K P S
Sbjct: 605 LIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 651
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/298 (35%), Positives = 167/298 (56%), Gaps = 11/298 (3%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD +T P VLKA L + G+ +H+ ++ G + S + +Y+K FE A K+
Sbjct: 104 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKL 163
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE PER + SWN +I+ QDG+ ++A+++F +K GF+PD VT+ +V S+C L DL
Sbjct: 164 FDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDL 223
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E ++H + V+S D + ++L+DMYGKCG +++A +VF +I + NV SW SMI
Sbjct: 224 ERGKEIHMEL--VRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 281
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQI 357
GY+ G + ++ F M E GIRP T +L AC +Q GK +++N ++
Sbjct: 282 GYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRN--RV 339
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
E ++DL + G + A + + MP K NVV W ++ G VK+G ++
Sbjct: 340 EADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSWNVMIS-----GYVKVGSYL 391
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 172/314 (54%), Gaps = 4/314 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WNN+I Y + P+KAL+++ M +G PD TL V+ + +L LE G+++H V
Sbjct: 175 WNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELV 234
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R G + F S + +Y K G E A++VF++ + + SWN++IAG S G +K I+
Sbjct: 235 RSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIE 294
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P T+ S+ AC +L+L +H Y+ ++++ ++D + +SLID+
Sbjct: 295 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYI--IRNRVEADIFVNSSLIDL 352
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A VF + + NV SW MI GY G EAL F MR++G++P+ +TF
Sbjct: 353 YFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 412
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VL AC +++GK + ++E G ++D+ + G ++EA + +P
Sbjct: 413 TSVLPACSQLAVLEKGKEIHNFIIE-SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471
Query: 389 MKANVVIWGCLMGA 402
+ + V W ++ A
Sbjct: 472 ER-DFVSWTSMIAA 484
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 154/296 (52%), Gaps = 12/296 (4%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN-EFCESGFISLYSKAGDFEKARKV 178
D L +LK L+ G+ +H V LGL++N C+S I+LY F+ A+ V
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKS-LINLYFSCHLFQSAKLV 60
Query: 179 FD--ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGSL 235
F ENP + WN ++A +++ E +++F L + +PD T SV AC L
Sbjct: 61 FQTIENP-LDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGL 119
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G + VH +V +KS D ++++S + MY KC + A K+F E+ + +V+SW +
Sbjct: 120 GRVGYGKMVHTHV--IKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 177
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF-FEMMKNV 354
+I Y +G +AL+ F M+ SG +P+ VT V+S+C ++ GK E++++
Sbjct: 178 VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSG 237
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ ++ + +VD+ G+ G LE A+ + E + K NVV W ++ G+ K
Sbjct: 238 FALDGFVS--SALVDMYGKCGCLEMAKEVFEQIQRK-NVVSWNSMIAGYSLKGDSK 290
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/373 (37%), Positives = 215/373 (57%), Gaps = 8/373 (2%)
Query: 89 WNNIIRLYT-RLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y R + + ++ M G+ P+ T +LKA L + GRQ+H+
Sbjct: 327 WTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHC 386
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ L + +S+Y+++G E+AR FD+ E+ + S++ + G DGR+
Sbjct: 387 VKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDG---DGRSNTYQ 443
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D I + G T S+ SA S+G L ++H +K+ SD + NSL+
Sbjct: 444 DYQIERMELGIST--FTFGSLISAAASVGMLTKGQRLH--ALSLKAGFGSDRAIGNSLVS 499
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG + A +VF E++ NV SWTSMI G A +G A AL+ FH M +G++PN VT
Sbjct: 500 MYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVT 559
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
++ VLSAC H G V+EGK F MM+ + + PR HY CMVDLLGR+GL+E+A + M
Sbjct: 560 YIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEM 619
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P + + ++W L+GAC+ N+ +GE A H+ +LEP YV+LSN+YA GLW++V
Sbjct: 620 PCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVA 679
Query: 448 RIRAVMKHRNLAK 460
RIR++M+ +NL K
Sbjct: 680 RIRSLMRDKNLMK 692
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 171/371 (46%), Gaps = 24/371 (6%)
Query: 42 SFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEA 101
S L+T A + T SKC+ + ++ M W + +R A
Sbjct: 78 SLLETDAVVANSLLTLYSKCSAVAAARSVF-----DGMPVGLRDLVSWTAMASCLSRNGA 132
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKA--SCQLFALEIGRQLHSLAVRLGLESNEFCE 159
+AL ++ G+LP+ +TL +A + +LF L G L L +LG +
Sbjct: 133 EAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVL-GLVFKLGFWGTDVSV 191
Query: 160 S-GFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
I +++K GD R+VFD ER + W +I +Q G + EA+++F+ + + GF
Sbjct: 192 GCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGF 251
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR---M 275
+PD T+ S+ SAC LG L Q+H ++ +SD+ + L+DMY K +
Sbjct: 252 QPDQYTLSSMLSACTELGSFRLGQQLHSLALRL--GLESDSCVSCGLVDMYAKSHNGQSL 309
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLA-NEALDCFHYMRESGIRPNHVTFVGVLSA 334
A +VF + + NV +WT+++ GY G N+ + F M GIRPNH+T+ +L A
Sbjct: 310 HNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKA 369
Query: 335 CVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMK 390
C + G G+ + + ++ A +V + +G +EEAR + + K
Sbjct: 370 CANLGDQDSGRQI-----HTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK 424
Query: 391 ANVVIWGCLMG 401
V G L G
Sbjct: 425 NMVSFSGNLDG 435
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 11/272 (4%)
Query: 137 LEIGRQLHSLAVRLG--LESNEFCESGFISLYSKAGDFEKARKVFDENPE--RKLGSWNA 192
+ +GR L +R G LE++ + ++LYSK AR VFD P R L SW A
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA-LQVHKYVFQV 251
+ + LS++G EA+ +F + G P+ T+ + T AC + LA V VF++
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
+D + +LIDM+ K G + +VF + + V WT +I YA +G ++EA++
Sbjct: 183 -GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F M E+G +P+ T +LSAC G + G+ + + +E +VD+
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRL-GLESDSCVSCGLVDMY 300
Query: 372 GRA---GLLEEARAMVEGMPMKANVVIWGCLM 400
++ L AR + MP K NV+ W L+
Sbjct: 301 AKSHNGQSLHNAREVFNRMP-KHNVMAWTALL 331
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF--WEIDQPNVSSWT 294
D+ L + ++ + S ++D ++ NSL+ +Y KC + A VF + ++ SWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-------VHGGKVQEGKHF 347
+M + NG EAL F E G+ PN T AC + GG V
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAV------ 175
Query: 348 FEMMKNVYQIE--PRFAHYGC-MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ V+++ GC ++D+ + G L R + +G+ + VV+W L+
Sbjct: 176 ---LGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGL-FERTVVVWTLLI 227
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 216/411 (52%), Gaps = 38/411 (9%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +I+ + + IY M G+ PD YTLP VLKA L + +G H +V+
Sbjct: 74 NTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQSVK 133
Query: 150 LGLESNEFCESGFISLYS-------------------------------KAGDFEKARKV 178
LG + F + I++YS K GD E AR +
Sbjct: 134 LGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARML 193
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE P + G W +II+G Q+ KE + MF ++ G EPD+ +VS+ AC LG +
Sbjct: 194 FDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAM 253
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E+ + VH+Y+ Q+ + LIDMY KCG +D+A K+F + Q + W +MI
Sbjct: 254 EIGVWVHRYLDQLG--HPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMIS 311
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A NG + AL F M ++G++P+ +TF+ + +AC + G E M VY +E
Sbjct: 312 GMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNME 371
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKAN----VVIWGCLMGACEKFGNVKMGEW 414
P+ HYGC+VDLLGRAGLL+EA+ ++ MP ++ + W L+ AC G ++ E
Sbjct: 372 PKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAED 431
Query: 415 VAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
A+ L LE S GAYV+LSN+YA+ G + V RIR +M++R + K P S
Sbjct: 432 AAQRLFHLEHHS-GAYVLLSNLYAAAGKQDHVRRIRKMMENRGVDKAPGCS 481
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%), Gaps = 3/214 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +II Y + K+ L ++ M G+ PD L +L A L A+EIG +H
Sbjct: 205 WGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWVHRYLD 264
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG + +G I +Y+K G + A+K+FD +R WNA+I+G++ +G A+
Sbjct: 265 QLGHPLSVRLSTGLIDMYAKCGSLDIAKKLFDGMSQRDTICWNAMISGMAMNGDGDNALR 324
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G +PDD+T +++ +AC G A+++ + V + + ++D+
Sbjct: 325 LFSEMEKAGVKPDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSE-HYGCIVDL 383
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
G+ G + A ++ + PN SS T + + A
Sbjct: 384 LGRAGLLKEAKELI--LKMPNSSSPTEQAIAWRA 415
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 39/294 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKA--GDFEKARKVFDENPERKLGSWNAIIAGLS 198
++ H+ + GL ++ F S ++ S G A K+F + + N +I
Sbjct: 22 KEAHAQVLTCGLGTDSFALSRLLAFCSHPLHGSLPHAWKLFQQIQHPTICICNTMIKAFV 81
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
G+ I ++ + + G PD+ T+ V AC L L H VK D
Sbjct: 82 LKGKLINTIQIYSQMLENGLYPDNYTLPYVLKACAGLQSCHLGESAHGQ--SVKLGFWFD 139
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA----------------- 301
+ N+LI MY G + A +F E+ SWT MI GYA
Sbjct: 140 IFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAVSWTVMISGYAKVGDVETARMLFDEAPM 199
Query: 302 --------------ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
N E L F M+ +G+ P+ V +L AC H G ++ G
Sbjct: 200 KDRGIWGSIISGYVQNNCFKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWV 259
Query: 348 FEMMKNV-YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ + + + R + ++D+ + G L+ A+ + +GM + + + W ++
Sbjct: 260 HRYLDQLGHPLSVRLS--TGLIDMYAKCGSLDIAKKLFDGMSQR-DTICWNAMI 310
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 90/251 (35%), Gaps = 67/251 (26%)
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A+K+F +I P + +MI + G + + M E+G+ P++ T VL
Sbjct: 53 GSLPHAWKLFQQIQHPTICICNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNYTLPYVL 112
Query: 333 SAC-----------VHGGKVQEGKHF-----------FEMMKNVYQIEPRF--------A 362
AC HG V+ G F + NV F
Sbjct: 113 KACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEMPWHTAV 172
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG--------------------- 401
+ M+ + G +E AR + + PMK + IWG ++
Sbjct: 173 SWTVMISGYAKVGDVETARMLFDEAPMK-DRGIWGSIISGYVQNNCFKEGLQMFRLMQST 231
Query: 402 --------------ACEKFGNVKMGEWVAKHLQEL-EPWSDGAYVVLSNIYASRGLWEEV 446
AC G +++G WV ++L +L P S L ++YA G +
Sbjct: 232 GLEPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIA 291
Query: 447 ERIRAVMKHRN 457
+++ M R+
Sbjct: 292 KKLFDGMSQRD 302
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 217/388 (55%), Gaps = 13/388 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I ++L ++ M G+ P+ YTL VL A C + L++G Q+HSL++
Sbjct: 228 WTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSI 287
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG------LSQDGR 202
+LG S+ ++ + LY K G +A+K+F+ L +WNA+IAG L++D
Sbjct: 288 KLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDV 347
Query: 203 A-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
A A+ MF L + G +PD T SV S C +L LE Q+H + +KS +
Sbjct: 348 AAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQI--IKSGVLA 405
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D ++ +L+ MY KCG +D A K F E+ + SWTSMI G+A +GL+ +AL F MR
Sbjct: 406 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR 465
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
GI+PN VTFVGVLSAC H G E ++FE+M+ Y I+P H+ C++D+ R G +
Sbjct: 466 LVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 525
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EEA +V M + N IW L+ C G +G + A+ L +L+P YV L N++
Sbjct: 526 EEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMH 585
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
S G W++V ++R +MK + K+ +S
Sbjct: 586 ISAGRWKDVSKVRKLMKEEKVGKLKDWS 613
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 33/339 (9%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + P AL ++I M AG P YTL IVL A L ++E G+Q+H+ +
Sbjct: 127 WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLI 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ + + S YSK E A K F E+ + SW ++I+ +G+A ++
Sbjct: 187 KYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLS 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ + G +P++ T+ SV SAC + L+L Q+H +K S L+ NS++ +
Sbjct: 247 FFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS--LSIKLGYGSSILIKNSIMYL 304
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY-----------AANGLANEALDCFHYMR 317
Y KCG + A K+F ++ N+ +W +MI G+ AA+ + AL F +
Sbjct: 305 YLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLY 364
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL------ 371
SG++P+ TF VLS C + +++G+ QI + G + D++
Sbjct: 365 RSGMKPDLFTFSSVLSVCSNLVALEQGE----------QIHGQIIKSGVLADVVVGTALV 414
Query: 372 ---GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
+ G +++A MP + ++ W ++ + G
Sbjct: 415 SMYNKCGSIDKASKAFLEMPSR-TMISWTSMITGFARHG 452
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 138/295 (46%), Gaps = 27/295 (9%)
Query: 122 YTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDE 181
Y P++ + + A E R +H V+ G + F + +++YSK G E A KVFD
Sbjct: 60 YYFPLLQECIDRNLATE-ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDN 118
Query: 182 NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA 241
P R + +W ++ G Q+ A+ +FI + + G P + T+ V +AC SL +E
Sbjct: 119 LPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFG 178
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
QVH Y+ +K DT + NSL Y K R++ A K F I + +V SWTS+I
Sbjct: 179 KQVHAYL--IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCC 236
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEM 350
NG A +L F M G++PN T VLSAC +H ++ G +
Sbjct: 237 DNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSIL 296
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+KN ++ L + G L EA+ + EGM N+V W ++ K
Sbjct: 297 IKN------------SIMYLYLKCGWLIEAQKLFEGME-TLNLVTWNAMIAGHAK 338
>gi|414588833|tpg|DAA39404.1| TPA: hypothetical protein ZEAMMB73_882385 [Zea mays]
Length = 668
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 206/327 (62%), Gaps = 7/327 (2%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAG--DFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H+L ++GL+ + I Y+K G D ARK+FD +R + SWN +IA +Q+
Sbjct: 214 IHALVSKIGLDGQTGVANTIIDAYAKGGGHDLGAARKLFDMM-DRDVVSWNTMIALYAQN 272
Query: 201 GRAKEAIDMFIGLKKCGFEP--DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
G + EA+ ++ + G + + VT+ +V AC G ++ ++H V V+ + +
Sbjct: 273 GLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQV--VRMGLEDN 330
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
+ S++DMY KCG++++A+K F +I N+ SW++MI GY +G EAL F MR+
Sbjct: 331 VYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEALHVFTDMRK 390
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
SG++PN++TF+ VL+AC H G + EG++++ MK + IEP HYGCMVDLLGRAG L+
Sbjct: 391 SGLKPNYITFITVLAACSHAGLLSEGRYWYNTMKTEFGIEPGVEHYGCMVDLLGRAGCLD 450
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYA 438
EA +++ M +K + +WG L+ AC + NV++ + A+ L EL+ + G YV+LSNIYA
Sbjct: 451 EAYGLIKEMKVKPDAALWGALLSACRIYKNVELAKICAERLFELDATNSGYYVLLSNIYA 510
Query: 439 SRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+W+EVER+R ++K R + K P YS
Sbjct: 511 EAGMWKEVERMRVLVKTRGIEKPPGYS 537
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 111/215 (51%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I LY + +AL +Y M G V + TL VL A A++ G+++H+
Sbjct: 262 WNTMIALYAQNGLSTEALGLYSKMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQ 321
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
VR+GLE N + + + +YSK G E A K F + + + SW+A+IAG G +EA
Sbjct: 322 VVRMGLEDNVYVGTSVVDMYSKCGKVEMAWKAFQKIKGKNILSWSAMIAGYGMHGYGQEA 381
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLN 263
+ +F ++K G +P+ +T ++V +AC G L +Y + + +
Sbjct: 382 LHVFTDMRKSGLKPNYITFITVLAACSHAG----LLSEGRYWYNTMKTEFGIEPGVEHYG 437
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G +D AY + E+ +P+ + W +++
Sbjct: 438 CMVDLLGRAGCLDEAYGLIKEMKVKPDAALWGALL 472
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 12/268 (4%)
Query: 140 GRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
GRQLH LA+R GL S+ +C S + +Y AR+ FDE P A+ +G
Sbjct: 107 GRQLHLLALRSGLFPSDAYCASALLHMYHHCFRPLDARRAFDEIPTPNPVIVTAMASGCM 166
Query: 199 QDGRAKEAIDMFIGLKKCGFEP--DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++ + +F + G D+ + SA + D + +H V ++
Sbjct: 167 RNNLVYTTLSIFRSMVASGSAGVVDEAAALVALSASARVPDRGITGGIHALVSKI--GLD 224
Query: 257 SDTLMLNSLIDMYGKCGRMDL--AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
T + N++ID Y K G DL A K+F +D+ +V SW +MI YA NGL+ EAL +
Sbjct: 225 GQTGVANTIIDAYAKGGGHDLGAARKLFDMMDR-DVVSWNTMIALYAQNGLSTEALGLYS 283
Query: 315 YMRESG--IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
M G +R N VT VL AC H G +Q GK + + +E +VD+
Sbjct: 284 KMLIVGGDVRCNAVTLSAVLLACAHAGAIQTGKRIHNQVVRM-GLEDNVYVGTSVVDMYS 342
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G +E A + + K N++ W ++
Sbjct: 343 KCGKVEMAWKAFQKIKGK-NILSWSAMI 369
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 209/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + +KA +++ M G P T +LKA L+ G+++ + +
Sbjct: 656 WTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHIL 715
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G E + + IS YSK+G ARKVFD+ P R + SWN +IAG +Q+G A+
Sbjct: 716 NSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQ 775
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+++ G + + VS+ +AC S LE +VH + VK K + D + +LI M
Sbjct: 776 FAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI--VKRKMQGDVRVGAALISM 833
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF + NV +W +MI YA +GLA++ALD F+ M + GI+P+ TF
Sbjct: 834 YAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTF 893
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+LSAC H G V EG F +++ + + P HYGC+V LLGRAG +EA ++ MP
Sbjct: 894 TSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMP 953
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ +W L+GAC GNV + E A + +L + YV+LSN+YA+ G W++V +
Sbjct: 954 FPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAK 1013
Query: 449 IRAVMKHRNLAKIPAYS 465
IR VM+ R + K P S
Sbjct: 1014 IRRVMEGRGIRKEPGRS 1030
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 203/405 (50%), Gaps = 20/405 (4%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
++C +L + +++ + + ++ WN II Y R E +A+ +Y M GV
Sbjct: 431 ARCGDLPRARELFNTMPKRDLIS-------WNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P T +L A A G+ +H +R G++SN + +++Y + G +A+ V
Sbjct: 484 PGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNV 543
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F+ R + SWN++IAG +Q G + A +F+ +KK G EPD +T SV C + L
Sbjct: 544 FEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEAL 603
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
EL Q+H + ++S + D + N+LI+MY +CG + AY+VF + NV SWT+MI
Sbjct: 604 ELGRQIHMLI--IESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIG 661
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQI 357
G+A G +A + F M+ G +P TF +L AC+ + EGK ++ + Y++
Sbjct: 662 GFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYEL 721
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
+ + ++ ++G + +AR + + MP + +++ W ++ + G A
Sbjct: 722 DTGVGN--ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIAGYAQNGLGGTALQFAY 778
Query: 418 HLQE----LEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+QE L +S +V + N +S EE +R+ A + R +
Sbjct: 779 QMQEQGVVLNKFS---FVSILNACSSFSALEEGKRVHAEIVKRKM 820
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 157/301 (52%), Gaps = 6/301 (1%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGF 162
++A + Y M GV+ + T VL A AL G +HS +G S+ +
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSL 426
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS+Y++ GD +AR++F+ P+R L SWNAIIAG ++ EA+ ++ ++ G +P
Sbjct: 427 ISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGR 486
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT + + SAC + +H+ + ++S KS+ + N+L++MY +CG + A VF
Sbjct: 487 VTFLHLLSACTNSSAYSDGKMIHEDI--LRSGIKSNGHLANALMNMYRRCGSIMEAQNVF 544
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
++ SW SMI G+A +G A F M++ G+ P+ +TF VL C + ++
Sbjct: 545 EGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALE 604
Query: 343 EGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
G+ + +++ Q++ + ++++ R G L++A + + + NV+ W ++G
Sbjct: 605 LGRQIHMLIIESGLQLDVNLGN--ALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIG 661
Query: 402 A 402
Sbjct: 662 G 662
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 158/344 (45%), Gaps = 13/344 (3%)
Query: 60 KCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
KC ++ +Q++ + R ++ WN++I Y + KKA ++ M AG +P
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVIS-------WNSLISCYAQQGFKKKAFQLFEEMQTAGFIP 181
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
T +L A C LE G+++HS + G + + ++ +++Y K D AR+VF
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
R + S+N ++ +Q +E I +F + G PD VT +++ A + L+
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLD 301
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
++HK V SD + +L M+ +CG + A + +V + ++I
Sbjct: 302 EGKRIHK--LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV-YQIE 358
A +G EA + ++ MR G+ N T++ VL+AC + G+ + V + +
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSD 419
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + ++ + R G L AR + MP K +++ W ++
Sbjct: 420 VQIGN--SLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAG 460
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 138/273 (50%), Gaps = 4/273 (1%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+L +++H+ V G+ + F + I++Y K A +VF + P R + SWN++I+
Sbjct: 97 SLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLIS 156
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+Q G K+A +F ++ GF P +T +S+ +AC S +LE ++H + +++
Sbjct: 157 CYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKI--IEAGY 214
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D + NSL++MYGKC + A +VF I + +V S+ +M+ YA E + F
Sbjct: 215 QRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQ 274
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAG 375
M GI P+ VT++ +L A + EGK ++ N + + + R G
Sbjct: 275 MSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVN-EGLNSDIRVGTALATMFVRCG 333
Query: 376 LLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ A+ +E + +VV++ L+ A + G+
Sbjct: 334 DVAGAKQALEAFADR-DVVVYNALIAALAQHGH 365
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 233/414 (56%), Gaps = 36/414 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
A WN +I Y R + ++A+D+Y M + + P+ T+ L A L LE+G+++H
Sbjct: 174 AVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIH 233
Query: 145 S-LAVRLGLES-------NEFCESGFISL----------------------YSKAGDFEK 174
+A L L + + +C+ G +S+ Y G ++
Sbjct: 234 DYIASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQ 293
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR +F+ +P R + W A+I G Q R +E I +F ++ G +PD +V++ + C
Sbjct: 294 ARNLFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQ 353
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
G LE +H Y+ + ++ K D ++ +LI+MY KCG ++ ++++F + + + +SWT
Sbjct: 354 SGALEQGKWIHNYIDE--NRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWT 411
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
S+I G A NG +EAL+ F M+ G++P+ +TFV VLSAC H G V+EG+ F M ++
Sbjct: 412 SIICGLAMNGKPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSM 471
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI---WGCLMGACEKFGNVKM 411
Y IEP HYGC +DLLGRAGLL+EA +V+ +P + N +I +G L+ AC +GN+ M
Sbjct: 472 YHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDM 531
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GE +A L +++ + +L++IYAS WE+V ++R MK + K+P YS
Sbjct: 532 GERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYS 585
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/472 (24%), Positives = 224/472 (47%), Gaps = 51/472 (10%)
Query: 15 MKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDP-AKIVATQL-SKCTNLLQLNQIYA 72
MK ++ L + CK+ + K + L D K++A + S + N+I+
Sbjct: 7 MKGTYISLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN 66
Query: 73 HIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASC 132
+I H S F +N +I+ + + + + A+ ++ + GV PD YT P VLK
Sbjct: 67 YI------HDPSL-FIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIG 119
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNA 192
+ + G ++H+ V+ GLE + + + F+ +Y++ G E +VF+E P+R SWN
Sbjct: 120 CIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNI 179
Query: 193 IIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
+I+G + R +EA+D++ + + +P++ T+VS SAC L +LEL ++H Y +
Sbjct: 180 MISGYVRCKRFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY---I 236
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
S+ T+M N+L+DMY KCG + +A ++F + NV+ WTSM+ GY G ++A +
Sbjct: 237 ASELDLTTIMGNALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARN 296
Query: 312 CFHY-------------------------------MRESGIRPNHVTFVGVLSACVHGGK 340
F M+ G++P+ V +L+ C G
Sbjct: 297 LFERSPSRDIVLWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGA 356
Query: 341 VQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+++GK + +N +++ ++++ + G +E++ + G+ K + W +
Sbjct: 357 LEQGKWIHNYIDENRIKVDAVVGT--ALIEMYAKCGCIEKSFEIFNGLKEK-DTTSWTSI 413
Query: 400 MGACEKFGNVKMGEWVAKHLQE--LEPWSDGAYVVLSNIYASRGLWEEVERI 449
+ G + K +Q L+P D +V + + + GL EE ++
Sbjct: 414 ICGLAMNGKPSEALELFKAMQTCGLKP-DDITFVAVLSACSHAGLVEEGRKL 464
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/393 (36%), Positives = 217/393 (55%), Gaps = 33/393 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA----------SCQLFALE 138
WN++I Y++ K+ L ++ M V D T+ V+ A C + +E
Sbjct: 1009 WNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIE 1068
Query: 139 ---------IGRQLHSLAVRLGL------------ESNEFCESGFISLYSKAGDFEKARK 177
+G L R+G + N + I+ Y+K G+ A+K
Sbjct: 1069 HNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKK 1128
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD+ P + L SW+++I SQ +++++F +++ +PD V + SV SAC LG
Sbjct: 1129 IFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGA 1188
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L +H YV ++ K+DT+M NSLIDM+ KCG + A +VF ++++ + SW S+I
Sbjct: 1189 LDLGKWIHDYV--RRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSII 1246
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
+G A NG +EALD FH M G RPN VTF+GVL AC + V+EG FE MK+V+ +
Sbjct: 1247 LGLANNGFEDEALDIFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNL 1306
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP+ HYGC+VD+L RAG LE+A + + MP+ + V+W L+GAC GNV + E K
Sbjct: 1307 EPQMKHYGCVVDILSRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATK 1366
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
L EL+P + ++LSNIYAS W + +R
Sbjct: 1367 KLSELDPGNSADSMLLSNIYASADRWSDAMNVR 1399
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 221/405 (54%), Gaps = 35/405 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y+ P +AL ++ +R + D + VLKA L G QLH+L V
Sbjct: 448 WRAFLKAYSHGPFPLEALHLFKH-ARQHLADDTFVFTFVLKACAGLGWHRAGAQLHALVV 506
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ--------- 199
+ G E + + + I++Y + +ARKVFDE P + + SWN +I G +
Sbjct: 507 QKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARL 566
Query: 200 -----------------DGRAK-----EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
DG + EA+ + + G P ++T+++V A +LG
Sbjct: 567 LFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGG 626
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE-IDQPNVSSWTSM 296
+ + ++ Y K SD + NSLID+Y K G + + KVF E +D+ N+ SWTS+
Sbjct: 627 ILMGEMLNGYC--EKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSI 684
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G+A +GL+ EAL+ F MR +GI+PN +TF+ V++AC HGG V++G FF+ M Y
Sbjct: 685 ISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYN 744
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
I+P H+GC++D+LGRAG L EA ++EG+PM+ NV +W L+G C K+G V MGE
Sbjct: 745 IDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAI 804
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
K + +LE S G + VLSN+ G + + E+ R ++ R + K+
Sbjct: 805 KMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKL 849
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 182/375 (48%), Gaps = 36/375 (9%)
Query: 58 LSKCTNLLQLNQ---IYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSR 114
+SK L L+Q + AH + + F WN ++R + +APK A+ Y
Sbjct: 876 MSKVIRLYALHQSDLVSAHKVFKQI--ESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQE 933
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ PD T P VLKA + A + G Q+H+ ++LG + F + I LY+ G
Sbjct: 934 KGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALAC 993
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR VF+E + + SWN++I G SQ R KE + +F ++ + D VTMV V SAC
Sbjct: 994 ARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTH 1053
Query: 235 LGDLELA-----------LQVHKY-----------VFQVKSKQK-------SDTLMLNSL 265
LGD +A ++V Y + Q++S +K +T+ LN++
Sbjct: 1054 LGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAM 1113
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
I Y K G + A K+F +I ++ SW+SMI Y+ +++L+ F M+ + ++P+
Sbjct: 1114 ITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDA 1173
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
V VLSAC H G + GK + ++ I+ ++D+ + G ++EA +
Sbjct: 1174 VVIASVLSACAHLGALDLGKWIHDYVRR-NNIKADTIMENSLIDMFAKCGCVQEALQVFT 1232
Query: 386 GMPMKANVVIWGCLM 400
M K + + W ++
Sbjct: 1233 DMEEK-DTLSWNSII 1246
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS-KAGDFEKARKVFDENPERKLGSWN 191
Q +E ++LH+ V GL + ++ S I LY+ D A KVF + WN
Sbjct: 850 QEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWN 909
Query: 192 AIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
++ GL+Q K+AI + ++ G +PD++T V AC + Q+H +V +
Sbjct: 910 TLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHV--I 967
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
K D + NSLI +Y CG + A VF E+ +V SW S+I GY+ + E L
Sbjct: 968 KLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLT 1027
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F M+ ++ + VT V V+SAC H G +++ + IE ++D
Sbjct: 1028 LFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNH-IEVDVYLGNTLIDYY 1086
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL--QELEPWSD-- 427
R G L+ A + M K N V ++ A K GN+ + + + ++L WS
Sbjct: 1087 CRIGQLQSAEKVFSQMKDK-NTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMI 1145
Query: 428 GAYVVLSNIYASRGLWEEVERIR 450
AY S+ S L+ +++R +
Sbjct: 1146 CAYSQASHFSDSLELFRQMQRAK 1168
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 213/361 (59%), Gaps = 2/361 (0%)
Query: 105 ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFIS 164
A++ + ++ + G++ + T+ VL A + AL+ G++LH ++ LE+ S
Sbjct: 399 AINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITD 458
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
+Y+K G + A + F +R WN++I+ SQ+G+ + AID+F + G + D V+
Sbjct: 459 MYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVS 518
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ S SA +L L ++H YV +++ SDT + ++LIDMY KCG + LA+ VF
Sbjct: 519 LSSALSAAANLPALYYGKEMHGYV--IRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNL 576
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+D N SW S+I Y +G E LD +H M +GI P+HVTF+ ++SAC H G V EG
Sbjct: 577 MDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEG 636
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
H+F M Y I R HY CMVDL GRAG + EA ++ MP + +WG L+GAC
Sbjct: 637 IHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACR 696
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAY 464
GNV++ + ++HL EL+P + G YV+LSN++A G W V ++R++MK + + KIP Y
Sbjct: 697 LHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGY 756
Query: 465 S 465
S
Sbjct: 757 S 757
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 142/302 (47%), Gaps = 7/302 (2%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +IR L AL Y M + V PD YT P V+KA L + + +H
Sbjct: 77 ALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHD 136
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A LG + F S I LY+ G AR+VFDE P R WN ++ G + G
Sbjct: 137 TARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDN 196
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
AI F ++ + VT + S C + G+ Q+H V + S + D + N+L
Sbjct: 197 AIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLV--IGSGFEFDPQVANTL 254
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG + A K+F + Q + +W +I GY NG +EA F+ M +G++P+
Sbjct: 255 VAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDS 314
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY--GCMVDLLGRAGLLEEARAM 383
VTF L + + G + +H E+ + + F Y ++D+ + G +E AR +
Sbjct: 315 VTFASFLPSILESGSL---RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKI 371
Query: 384 VE 385
+
Sbjct: 372 FQ 373
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++R Y + A+ + M + + + T +L G QLH L +
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G E + + +++YSK G+ ARK+F+ P+ +WN +IAG Q+G EA
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G +PD VT S + G L +VH Y+ V+ + D + ++LID+
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI--VRHRVPFDVYLKSALIDV 358
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G +++A K+F + +V+ T+MI GY +GL +A++ F ++ + G+ N +T
Sbjct: 359 YFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTM 418
Query: 329 VGVLSACVHGGKVQEGK 345
VL AC ++ GK
Sbjct: 419 ASVLPACAAVAALKPGK 435
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 175/363 (48%), Gaps = 18/363 (4%)
Query: 49 DP--AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
DP A + SKC NLL +++ + +T + WN +I Y + +A
Sbjct: 247 DPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVT-------WNGLIAGYVQNGFTDEAA 299
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
++ M AGV PD T L + + +L +++HS VR + + + +S I +Y
Sbjct: 300 PLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVY 359
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
K GD E ARK+F +N + A+I+G G +AI+ F L + G + +TM
Sbjct: 360 FKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMA 419
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
SV AC ++ L+ ++H ++ +K + ++ + +++ DMY KCGR+DLAY+ F +
Sbjct: 420 SVLPACAAVAALKPGKELHCHI--LKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS 477
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ W SMI ++ NG A+D F M SG + + V+ LSA + + GK
Sbjct: 478 DRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKE 537
Query: 347 FFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+++N + + A ++D+ + G L A + M K N V W ++ A
Sbjct: 538 MHGYVIRNAFSSDTFVA--STLIDMYSKCGNLALAWCVFNLMDGK-NEVSWNSIIAA--- 591
Query: 406 FGN 408
+GN
Sbjct: 592 YGN 594
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 8/213 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I +++ P+ A+D++ M +G D +L L A+ L AL G+++H +
Sbjct: 484 WNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVI 543
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R S+ F S I +YSK G+ A VF+ + SWN+IIA G +E +D
Sbjct: 544 RNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLD 603
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN---SL 265
++ + + G PD VT + + SACG G ++ + + F +++ + +
Sbjct: 604 LYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGI----HYFHCMTREYGIGARMEHYACM 659
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+D+YG+ GR+ A+ + P+ W +++
Sbjct: 660 VDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLL 692
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 118/280 (42%), Gaps = 6/280 (2%)
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP 183
L + +A ++ RQ+H+ + G+ S + LY G F A +F E
Sbjct: 14 LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELE 73
Query: 184 ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQ 243
R WN +I GL G A+ + + PD T V ACG L ++ L +
Sbjct: 74 LRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 133
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH + D ++LI +Y G + A +VF E+ + W M+ GY +
Sbjct: 134 VHDTARSLGF--HVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKS 191
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFA 362
G + A+ F MR S N VT+ +LS C G G + + + ++ +P+ A
Sbjct: 192 GDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVA 251
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ +V + + G L AR + MP + + V W L+
Sbjct: 252 N--TLVAMYSKCGNLLYARKLFNTMP-QTDTVTWNGLIAG 288
>gi|147811587|emb|CAN70294.1| hypothetical protein VITISV_005974 [Vitis vinifera]
Length = 562
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 3/383 (0%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+F +N ++R + + ++AL Y M+ GV PD +T P +LKA +L A+E G Q+H
Sbjct: 52 GSFZFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 111
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ ++LGLE++ F ++ IS+Y K G+ VF++ ER + SW+A+I + G
Sbjct: 112 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 171
Query: 205 EAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ + + + G+ ++ +VSV SAC LG L+L VH ++ +++ + ++
Sbjct: 172 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFL--LRNVSGLNVIVET 229
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SLI+MY KCG + +F ++ + N S++ MI G A +G E L F M E G+ P
Sbjct: 230 SLIEMYLKCGXLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP 289
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ + +VGVL+AC H G VQEG F MK + IEP HYGCMVDL+GRAG ++EA +
Sbjct: 290 DDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALEL 349
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MPM+ N V+W L+ A + N++ GE AK L +L+ YVVLSN+YA W
Sbjct: 350 IKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRW 409
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
E+V R R M + L++ P +SL
Sbjct: 410 EDVARTRTNMFSKGLSQRPGFSL 432
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 156/316 (49%), Gaps = 14/316 (4%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAII 194
+E +Q H+ ++ GL + FC S ++ S G + A +F + E +N ++
Sbjct: 1 MEEFKQSHARILKXGLFXDSFCASNLVATCALSDWGSMDYACSIFRQMDEPGSFZFNTMM 60
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G +D +EA+ + + + G +PD+ T ++ AC L +E +QVH ++ +K
Sbjct: 61 RGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHI--LKLG 118
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
++D + NSLI MYGKCG + + VF ++++ +V+SW+++I +A+ G+ ++ L
Sbjct: 119 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 178
Query: 315 YMRESGI-RPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLL 371
M G R V VLSAC H G + G+ H F +++NV + ++++
Sbjct: 179 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGF-LLRNVSGLNVIVE--TSLIEMY 235
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL--QELEPWSDGA 429
+ G L + + + M K N + + ++ G + G + + Q LEP D
Sbjct: 236 LKCGXLYKGMCLFQKMA-KKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP-DDIV 293
Query: 430 YVVLSNIYASRGLWEE 445
YV + N + GL +E
Sbjct: 294 YVGVLNACSHAGLVQE 309
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 239/445 (53%), Gaps = 45/445 (10%)
Query: 61 CTNLLQLNQIYAHIIRTHMLHSY------SAAFHWNNIIRLYTRLEAPKKALDIYIFMSR 114
C +L+ + YA + R L WN +I Y + + A+D++ M +
Sbjct: 170 CNSLMDM---YAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQ 226
Query: 115 AGVL-PDCYTLPIVLKASCQLFALEIGRQLH-------SLAVRLGLE-SNEFCESGFISL 165
L P+ T+ L A L LE+G+++H +++G + +C+ G +S+
Sbjct: 227 QSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKIGNALVDMYCKCGHLSI 286
Query: 166 ----------------------YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
Y G ++AR++F+ +P R + W A+I G Q R
Sbjct: 287 AREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRF 346
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A+ +F ++ PD T+V++ + C LG LE +H Y+ + +K D ++
Sbjct: 347 DDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDE--NKIMIDAVVGT 404
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+LI+MY KCG ++ + ++F + + + +SWTS+I G A NG ++AL+ F M ++G++P
Sbjct: 405 ALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKP 464
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ +TF+GVLSAC HGG V+EG+ F M VYQIEP+ HYGC++DLLGRAG L+EA +
Sbjct: 465 DDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEEL 524
Query: 384 VEGMPMKANVVI---WGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+E P N VI +G L+ AC GNV+MGE VAK L +E + +L+NIYAS
Sbjct: 525 IEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASA 584
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
WE+V ++R MK + K+P S
Sbjct: 585 DRWEDVTKVRRKMKDLGVKKVPGCS 609
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 217/489 (44%), Gaps = 78/489 (15%)
Query: 22 LHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHM-- 79
L + H K + +S +S F K L C ++ L QI I+RT
Sbjct: 9 LFKFTSLHFLSKPLHLSTSSHF------TKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQ 62
Query: 80 -------------------LHSYSAAFHW---------NNIIRLYTRLEAPKKALDIYIF 111
LH F++ N +I+ +T+ + +KA+ ++
Sbjct: 63 SGDTLNKFMVCCTDPSIGNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQ 122
Query: 112 MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGD 171
+ G+ PD +T P V KA L + G +++ V+ GLE + + + + +Y++ G
Sbjct: 123 LREEGLSPDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGR 182
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTS 230
+ R+VF+E P+R + SWN +I+G + R ++A+D+F + ++ P++ T+VS S
Sbjct: 183 VQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLS 242
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC +L LEL ++H+YV +Q T+ + N+L+DMY KCG + +A ++F ++
Sbjct: 243 ACIALKMLELGKEIHRYV----REQLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKT 298
Query: 290 VSSWTSMIVGYAANGLANEALDCFH----------------------------YMRESGI 321
V WTSM+ GY G +EA + F RE I
Sbjct: 299 VICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQI 358
Query: 322 R---PNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+ P+ T V +L+ C G +++GK H + + +N I+ ++++ + G
Sbjct: 359 KRVSPDRFTLVALLTGCAQLGTLEQGKWIHGY-IDENKIMIDAVVGT--ALIEMYAKCGF 415
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNI 436
+E++ + G+ K + G K E A+ +Q D ++ + +
Sbjct: 416 IEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKALELFAEMVQTGVKPDDITFIGVLSA 475
Query: 437 YASRGLWEE 445
+ GL EE
Sbjct: 476 CSHGGLVEE 484
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 205/362 (56%), Gaps = 2/362 (0%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+ L I+ M G +P+ YT +L + LF + GRQ+H+ ++ L+ N F + I
Sbjct: 499 RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K E A F+ R L +W II +Q + ++A++ F +++ G +P++
Sbjct: 559 DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ S C SL LE Q+H VF KS SD + ++L+DMY KCG M+ A +F
Sbjct: 619 TLAGCLSGCSSLASLEGGQQLHSMVF--KSGHVSDMFVGSALVDMYAKCGCMEEAEALFE 676
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + + +W ++I GYA NG N+AL F M + GI P+ VTF G+LSAC H G V+E
Sbjct: 677 ALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEE 736
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
GK F M + I P H CMVD+LGR G +E ++ M + N +IW ++GA
Sbjct: 737 GKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGAS 796
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ N+ +GE A L EL+P + +Y++LSNI+A+ G W++V+R+R++M + + K P
Sbjct: 797 KMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPG 856
Query: 464 YS 465
S
Sbjct: 857 CS 858
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 155/312 (49%), Gaps = 4/312 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I + ++++ ++ M LP+ YT+ +L A+ L+ G+ +H+
Sbjct: 383 WSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW 442
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E++ + +++Y K G K+++ +R L SWNA ++GL G +
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT 502
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + GF P+ T +S+ +C L D+ QVH ++ +K++ + + +LIDM
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI--IKNQLDDNNFVCTALIDM 560
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++ A F + ++ +WT +I YA +AL+ F M++ G++PN T
Sbjct: 561 YAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G LS C ++ G+ M+ + F +VD+ + G +EEA A+ E +
Sbjct: 621 AGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEAL- 678
Query: 389 MKANVVIWGCLM 400
++ + + W ++
Sbjct: 679 IRRDTIAWNTII 690
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 6/302 (1%)
Query: 108 IYIF--MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
IY+F M G++P+ +TL LKA AL++G+Q+H+ A +LGL + F S + L
Sbjct: 198 IYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDL 257
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+K G+ E A K+F PE+ +WN ++ G +Q G + +F + + + ++ T+
Sbjct: 258 YAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTL 317
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+V C + +L+ +H + +K + + + L+DMY KCG A VF I
Sbjct: 318 TTVLKGCANSKNLKQGQVIHSLI--IKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+P++ W+++I G + E++ FH MR PN T +LSA + G +Q G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ Y E A +V + + G + + + E M + +++ W +
Sbjct: 436 SIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSGLHD 493
Query: 406 FG 407
G
Sbjct: 494 CG 495
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 9/336 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + L ++ M V + +TL VLK L+ G+ +HSL +
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E NEF G + +YSK G A VF + + W+A+I L Q G+++E+I
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ P+ T+ S+ SA + G+L+ +H V+ K ++D + N+L+ M
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW--KYGFETDVAVSNALVTM 459
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + K++ + ++ SW + + G G+ + L F++M E G PN TF
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +L +C V G+ ++KN Q++ ++D+ + LE+A +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKN--QLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++ ++ W ++ + GE + ++++
Sbjct: 578 SVR-DLFTWTVII---TNYAQTNQGEKALNYFRQMQ 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+L + + +H L V+ + + +++Y+K AR V + P+R + SW A+I
Sbjct: 127 SLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQ 186
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
GL +G A ++I +F ++ G P++ T+ + AC L+L Q+H F++
Sbjct: 187 GLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKL--GL 244
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + ++L+D+Y KCG ++LA K+F + + N +W ++ GYA G L F
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRA 374
M E ++ N T VL C + +++G+ ++ F GC +VD+ +
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI--GCGLVDMYSKC 362
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
GL +A + + + K ++V+W L+ ++ G
Sbjct: 363 GLAIDAIGVFKTIK-KPDIVVWSALITCLDQQG 394
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W II Y + +KAL+ + M + GV P+ +TL L L +LE G+QLHS+
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM 642
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G S+ F S + +Y+K G E+A +F+ R +WN II G +Q+G+ +A
Sbjct: 643 VFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKA 702
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+ F + G PD VT + SAC G +E
Sbjct: 703 LTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 219/408 (53%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL----- 143
WN+II Y + KK LD++ M V D T+ + A+C L E+G L
Sbjct: 182 WNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID 241
Query: 144 -HSLAVRLGL-------------------------ESNEFCESGFISLYSKAGDFEKARK 177
H + V L L E N + I Y+K G+ A+K
Sbjct: 242 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKK 301
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E P R + SW ++I G S + EA+ +F + +PD++T+ + SAC LG
Sbjct: 302 LFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGS 361
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ VH Y+ K KSD + NSLIDMY KCG ++ A +VF ++ + SWTS+I
Sbjct: 362 LDAGEAVHDYI--RKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSII 419
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG A AL+ F M + GI P H TFVGVL AC H G V +G F+ M+N Y++
Sbjct: 420 SGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRL 479
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P HYGC+VDLL R+G L+ A ++ MP+ +VVIW L+ AC+ GN+ + E V+K
Sbjct: 480 APEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSK 539
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L L+P ++G YV+ S+ YA W++V +IR +M+ NL K AYS
Sbjct: 540 KLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYS 587
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 34/336 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ + P A+ Y M G+ T + K+ ++ + G+ + ++
Sbjct: 81 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSM 140
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG ES F + I +Y G+ A+KVFD ER + SWN+II G Q R K+ +D
Sbjct: 141 KLGFESYLFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLD 200
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ D VTM+ SA L + E+ + KY+ + D + N+LIDM
Sbjct: 201 LFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDE--HGVVVDLYLGNTLIDM 258
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG-------LAN-------------- 307
YG+ G +D A +VF+++ + N+ SW +MI+GYA G L N
Sbjct: 259 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 318
Query: 308 ----------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
EA+ F M S ++P+ +T LSAC H G + G+ + ++ + I
Sbjct: 319 IGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDI 377
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+ ++D+ + G++E+A + M + +V
Sbjct: 378 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 413
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 123/270 (45%), Gaps = 5/270 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYS-KAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
++LH+ VR + + S I Y+ KA VF++ L WN +I GLS+
Sbjct: 31 KELHAQLVRAQMHIDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSK 90
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
R +AI + + G + +T + + +C + D+ V V +K +S
Sbjct: 91 SDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVR--VHSMKLGFESYL 148
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N+LI MY G + +A KVF + + +V SW S+I GY + LD F M+
Sbjct: 149 FVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLDLFREMQAI 208
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
+R + VT + +SA + + G + + + + + ++D+ GR G+++
Sbjct: 209 NVRADSVTMMKAISATCFLSEWEMGDYLVKYIDE-HGVVVDLYLGNTLIDMYGRRGMIDF 267
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
A + M K N+V W ++ K GN+
Sbjct: 268 AGRVFYQMKEK-NIVSWNAMIMGYAKVGNL 296
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 93/222 (41%), Gaps = 46/222 (20%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A+ VF +I +P + W MI G + + N+A+ ++ M GI+ +H+TF+ + +C
Sbjct: 66 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 125
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANV 393
V++G+ M V+ ++ F Y ++ + G L A+ + +GM ++ +V
Sbjct: 126 VSDVRQGQ-----MVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDGM-LERDV 179
Query: 394 VIWGCLMGACEKFGNVKMGEWVAKHLQE-------------------LEPWSDGAYVV-- 432
V W ++ +F K + + +Q L W G Y+V
Sbjct: 180 VSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKY 239
Query: 433 ---------------LSNIYASRGLWEEVERIRAVMKHRNLA 459
L ++Y RG+ + R+ MK +N+
Sbjct: 240 IDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIV 281
>gi|357114903|ref|XP_003559233.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Brachypodium distachyon]
Length = 611
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 220/387 (56%), Gaps = 8/387 (2%)
Query: 86 AFHWNNIIRLYTRLEAP---KKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-FALEIGR 141
AF N +IR + P ++A + M RA V P+ +T P +LK+ L + ++G
Sbjct: 97 AFLVNTLIRTHVTSPFPSARRRAAAFFPLMLRAAVAPNKFTFPFLLKSCAALPGSPDVGL 156
Query: 142 QLHSLAVRLGLESNEFCESGFISLYS--KAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
Q H+ A++ G ++ + + I +YS AG AR VF+ P +W+A+I G +
Sbjct: 157 QAHAAALKFGFAADHYVSNTLIHMYSCFGAGFLGDARNVFERMPRESAVTWSAMIGGYVR 216
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G + +A+ +F G++ G PD+VT++ V +A LG LEL V ++V + + KS T
Sbjct: 217 AGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVGRFV-EREGIGKSVT 275
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L N+LID KCG +D A VF +++ V SWTS+I A G EA+ F M+
Sbjct: 276 L-CNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGKEAVGVFEEMKAV 334
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G+ P+ V F+GVL+AC H G V EG+ +F+ MK Y IEP+ HYGCMVD+ GRAG++E+
Sbjct: 335 GVLPDDVAFIGVLTACSHAGMVDEGRGYFDSMKTEYGIEPKIEHYGCMVDMFGRAGMVEQ 394
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
V MPMK N +IW L+ AC G +++GE + ++L P + YV+LSN+YA
Sbjct: 395 GLEFVRAMPMKPNPIIWRTLVAACRAHGRLELGESITRNLLNEFPAHEANYVMLSNVYAL 454
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSL 466
W+E IR M R + K+P SL
Sbjct: 455 TQRWKEKSEIRREMSKRGIKKVPGCSL 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+A W+ +I Y R A+ ++ M +GV PD T+ VL A+ L ALE+ R +
Sbjct: 203 SAVTWSAMIGGYVRAGLSSDAVVLFRGMQVSGVRPDEVTVIGVLAAAADLGALELTRWVG 262
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
R G+ + + I +K GD + A VF+ ER + SW ++I L+ +GR K
Sbjct: 263 RFVEREGIGKSVTLCNALIDTLAKCGDVDGAVAVFEGMEERTVVSWTSVIDALAMEGRGK 322
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--L 262
EA+ +F +K G PDDV + V +AC G ++ + Y +K++ + +
Sbjct: 323 EAVGVFEEMKAVGVLPDDVAFIGVLTACSHAGMVD---EGRGYFDSMKTEYGIEPKIEHY 379
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
++DM+G+ G ++ + + +PN W +++ A+G
Sbjct: 380 GCMVDMFGRAGMVEQGLEFVRAMPMKPNPIIWRTLVAACRAHG 422
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 214/393 (54%), Gaps = 33/393 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W IIR Y + P+KAL+++ M G+ PD + V+ A L L + + +H
Sbjct: 160 WTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIE 219
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENP------------------------- 183
+ G+E + F S IS Y + G + A + F E P
Sbjct: 220 KSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQ 279
Query: 184 ------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+R + SWN++I G ++ G+ +EA+ F ++ G P+ +T++S SAC S G
Sbjct: 280 LFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGA 339
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ +H YV K+ D + +SLIDMY KCG +D A ++F E + ++ +WTS++
Sbjct: 340 LDTGAWIHAYV--DKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIV 397
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A +G +AL F M+E+ ++P+ VT VGVLSAC H G + +G +F+ M+ V+ +
Sbjct: 398 CGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGL 457
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P+ HYGCMVDLLGR G L+EA ++ GMPM+AN +IWG + AC NV++GE A+
Sbjct: 458 VPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAAR 517
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
L L+P A V+LSN+YA W+ +R
Sbjct: 518 RLLGLDPRDPWARVMLSNMYAEEAKWDRSMGLR 550
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 151/329 (45%), Gaps = 45/329 (13%)
Query: 57 QLSKCTNLLQLNQIYAHIIRTHMLHSYSAA--------FHWNNIIR--LYTRLEAPKKAL 106
+L TN +L +I+ + I T + SAA F WN +IR + L L
Sbjct: 19 RLHPLTNPNKLPRIHGNTIAT--VEDPSAASRLDCANVFVWNTMIRKQVENGLITRDPPL 76
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
Y+ RAG+ P+ +T +LKA ++ G ++H+ VR G +EF + Y
Sbjct: 77 LYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFY 136
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
G K R+VFDE + L W II ++A+++F +++ G PD V +
Sbjct: 137 VACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAIS 196
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
+V SACG LGDL +A +H ++ KS + D + ++LI YG+CG +D AY+ F E
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFI--EKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETP 254
Query: 287 QPN-------------------------------VSSWTSMIVGYAANGLANEALDCFHY 315
N V SW SMI G+A G EAL FH
Sbjct: 255 MKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHE 314
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEG 344
M SG+ PN +T + LSAC G + G
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTG 343
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 12/229 (5%)
Query: 190 WNAIIAGLSQDG---RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
WN +I ++G R + GL+ G P+ T + + A S +++ +VH
Sbjct: 57 WNTMIRKQVENGLITRDPPLLYYMQGLRA-GLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
V V++ + +L+ Y CG + +VF E+ QP + WT +I Y
Sbjct: 116 SV--VRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFP 173
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGK--VQEGKHFFEMMKNVYQIEPRFAHY 364
+AL+ F MRE G+ P+ V V+SAC G V + H F + K+ +++ +
Sbjct: 174 EKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCF-IEKSGIEVDAFVS-- 230
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
++ G G L+ A + PMK N+V+W ++ + N+++G+
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMK-NIVVWNTMIHQSVEHNNLELGK 278
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 10/408 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC +L ++ + S + + ++I Y R +A+ ++ M G+
Sbjct: 191 SKCGDLDSAKAVFREM-------SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 243
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+ VL + L+ G+++H L + F + + +Y+K G ++A V
Sbjct: 244 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 303
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGD 237
F E + + SWN II G S++ A EA+ +F + L++ F PD+ T+ V AC SL
Sbjct: 304 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 363
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+ ++H Y+ +++ SD + NSL+DMY KCG + LA+ +F +I ++ SWT MI
Sbjct: 364 FDKGREIHGYI--MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 421
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY +G EA+ F+ MR++GI + ++FV +L AC H G V EG FF +M++ +I
Sbjct: 422 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 481
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HY C+VD+L R G L +A +E MP+ + IWG L+ C +VK+ E VA+
Sbjct: 482 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 541
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + G YV+++NIYA WE+V+R+R + R L K P S
Sbjct: 542 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 589
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/320 (32%), Positives = 156/320 (48%), Gaps = 4/320 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + ++ ++ M +GV D YT V K+ L ++ G QLH
Sbjct: 9 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 68
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
++ G + ++ Y K + ARKVFDE ER + SWN+II G +G A++
Sbjct: 69 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 128
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+ +F+ + G E D T+VSV + C + L VH VK+ + N+L
Sbjct: 129 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS--IGVKACFSREDRFCNTL 186
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG +D A VF E+ +V S+TSMI GYA GLA EA+ F M E GI P+
Sbjct: 187 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 246
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VL+ C + EGK E +K F M D+ + G ++EA +
Sbjct: 247 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM-DMYAKCGSMQEAELVFS 305
Query: 386 GMPMKANVVIWGCLMGACEK 405
M +K +++ W ++G K
Sbjct: 306 EMRVK-DIISWNTIIGGYSK 324
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 10/371 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y +K L +++ M +G+ D T+ V + +GR +HS+ V
Sbjct: 113 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 172
Query: 149 RLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + FC + + +YSK GD + A+ VF E +R + S+ ++IAG +++G A EA+
Sbjct: 173 KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 231
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +++ G PD T+ +V + C L+ +VH+++ + + D + N+L+D
Sbjct: 232 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE--NDLGFDIFVSNALMD 289
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH-YMRESGIRPNHV 326
MY KCG M A VF E+ ++ SW ++I GY+ N ANEAL F+ + E P+
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VL AC +G+ +M+N Y + A+ +VD+ + G L A + +
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFD 407
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWE 444
+ K ++V W ++ G K + +++ +D ++V L + GL +
Sbjct: 408 DIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 466
Query: 445 EVERIRAVMKH 455
E R +M+H
Sbjct: 467 EGWRFFNIMRH 477
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE K WN ++ L++ G +I +F + G E D T V+ + SL +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
Q+H ++ +KS + NSL+ Y K R+D A KVF E+ + +V SW S+I
Sbjct: 61 HGGEQLHGFI--LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 118
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQI 357
GY +NGLA + L F M SGI + T V V + C + G+ + +K +
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
E RF + ++D+ + G L+ A+A+ M ++ VV + ++ + G + +
Sbjct: 179 EDRFCN--TLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREGLAGEAVKLFE 235
Query: 418 HLQELEPWSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
++E E S Y V + N A L +E +R+ +K +L
Sbjct: 236 EMEE-EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 278
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 206/377 (54%), Gaps = 1/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I R +A +++ M + + P+ YT+ +L A + L+ GR +H +
Sbjct: 426 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 485
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N+ + +Y GD AR +F+ P+R L SWNA+IA ++ +A +A+
Sbjct: 486 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALL 545
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + EP+ VT+++V S+ L L +H YV + D + N+ I M
Sbjct: 546 LFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 604
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG + A +F + + N+ SW +MI GY NG ++A+ F M E G RPN VTF
Sbjct: 605 YARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTF 664
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSAC H G ++ G F M + + P HY C+VDLL R G ++EAR ++ MP
Sbjct: 665 VSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMP 724
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ + +W L+ +C + + K + + + L +LEP + G YV+LSN+YA+ GLW EV R
Sbjct: 725 IEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRR 784
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +K + L K P S
Sbjct: 785 IRTWLKEKGLRKPPGIS 801
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 168/318 (52%), Gaps = 11/318 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + KAL++++ M V DC T+ + ++A +L +L++G+Q+H LA+
Sbjct: 223 WNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAI 282
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + + +++YS G E + ++F+ P R WN++I+ + G +EA+D
Sbjct: 283 KFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMD 342
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+FI ++ G + D+ T+V + S C L L +H +V +KS + D + N+L+
Sbjct: 343 LFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHV--IKSGMRIDASLGNALLS 400
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY + ++ K+F + ++ SW +MI+ A N L +A + F MRES I+PN T
Sbjct: 401 MYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYT 460
Query: 328 FVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEP-RFAHYGCMVDLLGRAGLLEEARAMV 384
+ +L+AC + G+ H + M ++ +P R A + D+ G AR +
Sbjct: 461 IISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTA----LADMYMNCGDEATARDLF 516
Query: 385 EGMPMKANVVIWGCLMGA 402
EG P + +++ W ++ +
Sbjct: 517 EGCPDR-DLISWNAMIAS 533
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 16/326 (4%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
HWN++I+ L+ + L Y M GVLP+ TLP+VLKA A+E G+ +H
Sbjct: 20 HWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSI 79
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
L + + + Y K G E AR VFD +R + WNA++ G G +EA+
Sbjct: 80 QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAM 139
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+ + + P+ TMV++ AC +L L VH Y + S+ + +LI
Sbjct: 140 LLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR-NGMFDSNPHVATALIG 198
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y + M + +F + N+ SW +MI GY G +AL+ F M ++ + VT
Sbjct: 199 FYLRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVT 257
Query: 328 FVGVLSACVHGGKVQEGKHF------FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+ + AC G ++ GK FE ++++Y + ++++ G LE +
Sbjct: 258 MLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYIL-------NALLNMYSNNGSLESSH 310
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFG 407
+ E +P + + +W ++ A FG
Sbjct: 311 QLFESVPNR-DAPLWNSMISAYAAFG 335
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 210/382 (54%), Gaps = 9/382 (2%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRA-GVLPDCYTLPIVLKASCQLFALEIGRQLH 144
A W +II +TR + KAL + M R G+ PD +T VL A L L+ G+++H
Sbjct: 228 AICWTSIISAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVH 287
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ + GL N F ES + +Y K +++ VFD + L SW A++ G Q+G +
Sbjct: 288 AKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFE 347
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH-KYVFQVKSKQKSDTLMLN 263
I +F + G + D + +V AC L + +VH +YV K D + +
Sbjct: 348 SVIRIF----REGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYV---KRCCWRDVVTES 400
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+L+D+Y KCG +D AY++F + N+ +W SMI G+A NG E F M E GIRP
Sbjct: 401 ALVDLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRP 460
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
++++FVGVL AC H G V +GK +F M VY+I+P HY CM+DLLGRAGLLEEA +
Sbjct: 461 DYISFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENL 520
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
+E + +W L+GAC + E +AK EL+P +YV L+N+Y + G W
Sbjct: 521 IENANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRW 580
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
++ +IR +M R + K+P S
Sbjct: 581 DDAVKIRNLMTKRGVGKMPGTS 602
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 166/305 (54%), Gaps = 6/305 (1%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG-DFEKARKVFDENPER 185
+L+ + + G Q HS A++ GL+++ F + ++LY K G + +AR+VFD +
Sbjct: 66 LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
L SW ++I G + + K+++++F+ + G EP+ T+ +V AC LGDL L H
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
V V+ +D + +LIDMYG+ +D A VF E+ QP+ WTS+I + N +
Sbjct: 186 G-VVMVRGFDLNDVIS-TALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDV 243
Query: 306 ANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
++AL F+ M R+ G+ P+ TF VL+AC + G++++GK + F
Sbjct: 244 YDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVE- 302
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
+VD+ G+ L+ +++ + + M +K N+V W L+G + G+ + + + ++++
Sbjct: 303 SSLVDMYGKCRLVNQSQCVFDRMSVK-NLVSWTALLGGYCQNGDFESVIRIFREGKKVDT 361
Query: 425 WSDGA 429
+S G
Sbjct: 362 YSFGT 366
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 27/328 (8%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y W ++I Y ++E PKK+L++++ M G+ P+ +TL V+KA L L +G+
Sbjct: 124 YKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKC 183
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
H + + G + N+ + I +Y + + A VF E P+ W +II+ +++
Sbjct: 184 FHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDV 243
Query: 203 AKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+A+ F + +K G PD T +V +ACG+LG L+ +VH V + S + +
Sbjct: 244 YDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKV--ITSGLSGNVFV 301
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+SL+DMYGKC ++ + VF + N+ SWT+++ GY NG + F RE G
Sbjct: 302 ESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIF---RE-GK 357
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC---------MVDLLG 372
+ + +F VL AC V++GK ++ ++ C +VDL
Sbjct: 358 KVDTYSFGTVLRACAGLAAVRQGK----------EVHCQYVKRCCWRDVVTESALVDLYA 407
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G ++ A + M ++ N++ W ++
Sbjct: 408 KCGCIDFAYRIFVRMSVR-NLITWNSMI 434
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 10/408 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC +L ++ + S + + ++I Y R +A+ ++ M G+
Sbjct: 342 SKCGDLDSAKAVFREM-------SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+ VL + L+ G+++H L + F + + +Y+K G ++A V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGD 237
F E + + SWN II G S++ A EA+ +F + L++ F PD+ T+ V AC SL
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+ ++H Y+ +++ SD + NSL+DMY KCG + LA+ +F +I ++ SWT MI
Sbjct: 515 FDKGREIHGYI--MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY +G EA+ F+ MR++GI + ++FV +L AC H G V EG FF +M++ +I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HY C+VD+L R G L +A +E MP+ + IWG L+ C +VK+ E VA+
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + G YV+++NIYA WE+V+R+R + R L K P S
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 166/347 (47%), Gaps = 11/347 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+ C +L + ++++ + A WN ++ + ++ ++ M +GV
Sbjct: 140 TNCGDLKEASRVFDEV-------KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D YT V K+ L ++ G QLH ++ G + ++ Y K + ARKV
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE ER + SWN+II G +G A++ + +F+ + G E D T+VSV + C +
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L VH VK+ + N+L+DMY KCG +D A VF E+ +V S+TSMI
Sbjct: 313 SLGRAVHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA GLA EA+ F M E GI P+ T VL+ C + EGK E +K
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F M D+ + G ++EA + M +K +++ W ++G K
Sbjct: 431 DIFVSNALM-DMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSK 475
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 10/371 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y +K L +++ M +G+ D T+ V + +GR +HS+ V
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 149 RLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + FC + + +YSK GD + A+ VF E +R + S+ ++IAG +++G A EA+
Sbjct: 324 KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +++ G PD T+ +V + C L+ +VH+++ + + D + N+L+D
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE--NDLGFDIFVSNALMD 440
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH-YMRESGIRPNHV 326
MY KCG M A VF E+ ++ SW ++I GY+ N ANEAL F+ + E P+
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VL AC +G+ +M+N Y + A+ +VD+ + G L A + +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFD 558
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWE 444
+ K ++V W ++ G K + +++ +D ++V L + GL +
Sbjct: 559 DIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 445 EVERIRAVMKH 455
E R +M+H
Sbjct: 618 EGWRFFNIMRH 628
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 164/345 (47%), Gaps = 13/345 (3%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D TL VL+ +L+ G+++ + G + S +Y+ GD ++A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
DE K WN ++ L++ G +I +F + G E D T V+ + SL +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H ++ + +++ + NSL+ Y K R+D A KVF E+ + +V SW S+I G
Sbjct: 213 GGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIE 358
Y +NGLA + L F M SGI + T V V + C + G+ + +K + E
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
RF + ++D+ + G L+ A+A+ M ++ VV + ++ + G GE V K
Sbjct: 331 DRFCN--TLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREG--LAGEAV-KL 384
Query: 419 LQELEP--WSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
+E+E S Y V + N A L +E +R+ +K +L
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 228/410 (55%), Gaps = 11/410 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N+ + I+ + + ++ W ++ Y + AL + M V
Sbjct: 270 AKCGNMDEAQMIFYEMDKRDVVS-------WTTMMNGYILNGDARSALLLCQMMQFESVK 322
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ TL VL A L++L+ GR LH A+R LES E+ I +Y+K + + +V
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRV 382
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + +++ WNAII+G +G +++AI++F + +P+D T+ S+ A L DL
Sbjct: 383 FSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN--VSSWTSM 296
+ A +H Y+ ++S S + LID+Y KCG ++ A+ +F I + + + +W+++
Sbjct: 443 QQARNMHGYL--IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY +G A+ F M +SG++PN +TF +L AC H G V EG F+ M Q
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ R HY C++DLLGRAG LEEA ++ M + N +WG L+G+C NV++GE A
Sbjct: 561 MSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAA 620
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
K L ELEP + G YV+L+NIY++ G W + E +R +M + L K PA+SL
Sbjct: 621 KWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSL 670
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 150/260 (57%), Gaps = 3/260 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR+YT AL +++ M +G PD YT P V+KA E+G +H+
Sbjct: 88 FSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHA 147
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V G +S+ F ++ +++Y G+ E AR+VFD ER L SWN +I G ++G KE
Sbjct: 148 RTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKE 207
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F + G EPD T+VSV C L +LE+ +VH V +VK+ + D + NSL
Sbjct: 208 ALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV-EVKNLGE-DISVWNSL 265
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG MD A +F+E+D+ +V SWT+M+ GY NG A AL M+ ++PN
Sbjct: 266 LDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNF 325
Query: 326 VTFVGVLSACVHGGKVQEGK 345
VT VLSAC ++ G+
Sbjct: 326 VTLASVLSACASLYSLKHGR 345
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 163/315 (51%), Gaps = 4/315 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL ++ +M G+ PDC T+ VL L LE+GR++H+L
Sbjct: 192 WNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVE 251
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L + + + +Y+K G+ ++A+ +F E +R + SW ++ G +G A+ A+
Sbjct: 252 VKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL 311
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ +P+ VT+ SV SAC SL L+ +H + ++ K +S+ ++ +LIDM
Sbjct: 312 LCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA--IRQKLESEVIVETALIDM 369
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++L+++VF + + + W ++I G NGL+ +A++ F M + PN T
Sbjct: 370 YAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATL 429
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L A +Q+ ++ + + R ++D+ + G LE A + G+P
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIP 488
Query: 389 MK-ANVVIWGCLMGA 402
K +++ W ++
Sbjct: 489 KKDKDIITWSAIIAG 503
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 141 RQLHSLAVRLGLESNEFCE---SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+Q+H+ + LGL S+ + S + Y+ G ARK+FDE L SWNA+I
Sbjct: 38 KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMY 97
Query: 198 SQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+ G + +A+ +F+ + G PD+ T V ACG E+ +H V S
Sbjct: 98 TNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHART--VMSGFD 155
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
SD + NSL+ MY CG M++A +VF + + + SW +MI GY NG EAL F +M
Sbjct: 156 SDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM 215
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
GI P+ T V VL C + +++ G+ +++ V + + + ++D+ + G
Sbjct: 216 IGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVE-VKNLGEDISVWNSLLDMYAKCGN 274
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
++EA+ + M K +VV W +M
Sbjct: 275 MDEAQMIFYEMD-KRDVVSWTTMMNG 299
>gi|356547105|ref|XP_003541958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g18970-like [Glycine max]
Length = 477
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 198/365 (54%), Gaps = 20/365 (5%)
Query: 112 MSRAGVLPDCYTLPIVLKA---SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
SR + D YT VL A S L +GRQLH+ V+ G ESN + I Y+
Sbjct: 96 FSRGLMYFDEYTYNFVLGACARSPSASTLWVGRQLHARIVKHGFESNILVPTTKIYFYAS 155
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLS--QDGRAKEA-------IDMFIGLKKCGFE 219
D AR+VFDE P R +WNA+I G S ++G K A IDM + + +
Sbjct: 156 NKDIISARRVFDEMPRRSTVTWNAMITGYSSQKEGNKKYALNALSLFIDMLVDVSV--IK 213
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P T+VSV SA +G LE +H + + + D + L+DMY KCG +D A
Sbjct: 214 PTGTTIVSVLSAVSQIGMLETGACIHGFAEKTVCTPEDDVFIGTGLVDMYSKCGCLDSAL 273
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VFW ++Q N+ +WT+M A +G +AL+ + M G++PN TF LSAC HGG
Sbjct: 274 SVFWRMNQKNILTWTAMTTSLAIHGKGKQALEVLYKMGAYGVKPNEATFTSFLSACCHGG 333
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG F MK + + P+ HYGC+VDLLGRAG LEEA + MP+ + VIW L
Sbjct: 334 LVEEGLILFHEMKRTFGMMPQIKHYGCIVDLLGRAGNLEEAYDFIMRMPINPDAVIWRSL 393
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGA------YVVLSNIYASRGLWEEVERIRAVM 453
+GAC+ G+V MGE V K L +LE WS Y+ LSN+YA W++VE +R M
Sbjct: 394 LGACKIHGDVVMGEKVGKFLLQLEEWSSAESPKSEDYIALSNVYALAEKWDDVEIVRKTM 453
Query: 454 KHRNL 458
K + +
Sbjct: 454 KSKGI 458
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 209/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I YT+ KAL + M G+ D L + A L AL+ G+Q+H+ A
Sbjct: 519 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 578
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S+ ++ ++LYS+ G E++ F++ +WNA+++G Q G +EA+
Sbjct: 579 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 638
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + ++ T S A +++ QVH + K+ S+T + N+LI M
Sbjct: 639 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI--TKTGYDSETEVCNALISM 696
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K F E+ N SW ++I Y+ +G +EALD F M S +RPNHVT
Sbjct: 697 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 756
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC H G V +G +FE M + Y + P+ HY C+VD+L RAGLL A+ ++ MP
Sbjct: 757 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 816
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + ++W L+ AC N+++GE+ A HL ELEP YV+LSN+YA W+ +
Sbjct: 817 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 876
Query: 449 IRAVMKHRNLAKIPAYS 465
R MK + + K P S
Sbjct: 877 TRQKMKEKGVKKEPGQS 893
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 161/324 (49%), Gaps = 16/324 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++ E +A+ ++ M G++P Y VL A ++ +LEIG QLH L +
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 275
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG S+ + + +SLY G+ A +F +R ++N +I GLSQ G ++A++
Sbjct: 276 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 335
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G EPD T+ S+ AC + G L Q+H Y K S+ + +L+++
Sbjct: 336 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT--TKLGFASNNKIEGALLNL 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR---PNH 325
Y KC ++ A F E + NV W M+V Y GL ++ + F R+ I PN
Sbjct: 394 YAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQ 450
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARA 382
T+ +L C+ G ++ G+ +++K +Q+ Y C ++D+ + G L+ A
Sbjct: 451 YTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWD 506
Query: 383 MVEGMPMKANVVIWGCLMGACEKF 406
++ K +VV W ++ ++
Sbjct: 507 ILIRFAGK-DVVSWTTMIAGYTQY 529
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 6/341 (1%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N I A I ++M S A +N +I ++ +KA++++ M G+ PD TL +
Sbjct: 298 NLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 355
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A L G+QLH+ +LG SN E ++LY+K D E A F E +
Sbjct: 356 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 415
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
WN ++ + + +F ++ P+ T S+ C LGDLEL Q+H
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 475
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ +K+ + + + + LIDMY K G++D A+ + +V SWT+MI GY +
Sbjct: 476 I--IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 533
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+AL F M + GIR + V +SAC ++EG+ V +
Sbjct: 534 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNAL 592
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
V L R G +EE+ E N+ W L+ ++ GN
Sbjct: 593 VTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 632
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y L+ + + I+ M ++P+ YT P +LK +L LE+G Q+HS +
Sbjct: 418 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 477
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + N + S I +Y+K G + A + + + SW +IAG +Q +A+
Sbjct: 478 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 537
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + G D+V + + SAC L L+ Q+H S SD N+L+ +
Sbjct: 538 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA--CVSGFSSDLPFQNALVTL 595
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG+++ +Y F + + + +W +++ G+ +G EAL F M GI N+ TF
Sbjct: 596 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 329 VGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++GK ++ K Y E + ++ + + G + +A +
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN--ALISMYAKCGSISDAEKQFLEV 713
Query: 388 PMKANVVIWGCLMGACEKFG 407
K N V W ++ A K G
Sbjct: 714 STK-NEVSWNAIINAYSKHG 732
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 116 GVLPDCYTLPIVLKASCQLF-ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ P+ TL +L+ + +L+ GR+LHS ++LGL+SN Y GD
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC-- 232
A KVFDE PER + +WN +I L+ E +F+ + P++ T V AC
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
GS+ ++ Q+H + + + T++ N LID+Y + G +DLA +VF + + SS
Sbjct: 159 GSVA-FDVVEQIHARI--LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 215
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI G + N EA+ F M GI P F VLSAC ++ G+ +
Sbjct: 216 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL-- 273
Query: 353 NVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK--FGN 408
V ++ Y C +V L G L A + M + + V + L+ + +G
Sbjct: 274 -VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 331
Query: 409 VKMGEWVAKHLQELEPWSD 427
M + HL LEP S+
Sbjct: 332 KAMELFKRMHLDGLEPDSN 350
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 15/322 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ--LFALEIGRQLH 144
F WN +I+ + +++ M V P+ T VL+A C+ A ++ Q+H
Sbjct: 112 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 170
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ + GL + + I LYS+ G + AR+VFD + SW A+I+GLS++
Sbjct: 171 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 230
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI +F + G P SV SAC + LE+ Q+H V ++ SDT + N+
Sbjct: 231 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVCNA 288
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ +Y G + A +F + Q + ++ ++I G + G +A++ F M G+ P+
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEA 380
T ++ AC G + G+ + Y + FA G +++L + +E A
Sbjct: 349 SNTLASLVVACSADGTLFRGQQL-----HAYTTKLGFASNNKIEGALLNLYAKCADIETA 403
Query: 381 RAMVEGMPMKANVVIWGCLMGA 402
++ NVV+W ++ A
Sbjct: 404 LDYFLETEVE-NVVLWNVMLVA 424
>gi|357142905|ref|XP_003572732.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Brachypodium distachyon]
Length = 669
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 217/372 (58%), Gaps = 15/372 (4%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESG 161
P AL + S + D + AS ++ I LH+L V+ GL+ + +
Sbjct: 174 PSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALVVKTGLDGDAGVVNT 233
Query: 162 FISLYSKAG--DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF------IGL 213
+ Y+K G D ARKVFD E+ + SWN++IA +Q+G + +A+ ++ G
Sbjct: 234 MLDAYAKGGRRDLGAARKVFD-TMEKDVVSWNSMIALYAQNGMSADALGLYRKMLNVSGS 292
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
KC + VT+ ++ AC G ++ +H V V+ + + + S++DMY KCG
Sbjct: 293 IKC----NAVTLSAILLACAHAGTIQTGKCIHNQV--VRMGLEENVYVGTSVVDMYSKCG 346
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
R+++A K F +I + N+ SW++MI GY +G EALD F+ M SG PN++TF+ VL+
Sbjct: 347 RVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEALDIFNEMCRSGQNPNYITFISVLA 406
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
AC H G + +G++++ MK + IEP HYGCMVDLLGRAG L+EA +++ M +K +
Sbjct: 407 ACSHAGLLDKGRYWYNAMKKRFGIEPGVEHYGCMVDLLGRAGCLDEAYGLIKEMKVKPDA 466
Query: 394 VIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
IWG L+ AC NV++ E AK L EL+ + G YV+LSNIYA G+W++VER+R ++
Sbjct: 467 AIWGALLSACRIHKNVELAEISAKRLFELDATNCGYYVLLSNIYAEAGMWKDVERMRVLV 526
Query: 454 KHRNLAKIPAYS 465
K R + K P YS
Sbjct: 527 KTRGIEKPPGYS 538
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 129/268 (48%), Gaps = 12/268 (4%)
Query: 140 GRQLHSLAVRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
GRQLH LA+R GL S+ F S + +Y+ ARK FDE P A+ +G
Sbjct: 108 GRQLHLLAIRSGLFPSDPFSASALLHMYNHCSRPIDARKAFDEIPSPNPVIITAMASGYV 167
Query: 199 QDGRAKEAIDMFIGLKKCGFEP--DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
++ ++ +F L G D+ + SA + D + +H V VK+
Sbjct: 168 RNNLVYPSLALFRKLIASGSATAVDEAAALVAFSASARIPDCGITSSLHALV--VKTGLD 225
Query: 257 SDTLMLNSLIDMYGKCGRMDL--AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
D ++N+++D Y K GR DL A KVF +++ +V SW SMI YA NG++ +AL +
Sbjct: 226 GDAGVVNTMLDAYAKGGRRDLGAARKVFDTMEK-DVVSWNSMIALYAQNGMSADALGLYR 284
Query: 315 YMRE--SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLG 372
M I+ N VT +L AC H G +Q GK + + +E +VD+
Sbjct: 285 KMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQVVRM-GLEENVYVGTSVVDMYS 343
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ G +E AR + + K N++ W ++
Sbjct: 344 KCGRVEMARKAFQKIKEK-NILSWSAMI 370
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 10/215 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC--YTLPIVLKASCQLFALEIGRQLHSL 146
WN++I LY + AL +Y M C TL +L A ++ G+ +H+
Sbjct: 263 WNSMIALYAQNGMSADALGLYRKMLNVSGSIKCNAVTLSAILLACAHAGTIQTGKCIHNQ 322
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
VR+GLE N + + + +YSK G E ARK F + E+ + SW+A+I G G +EA
Sbjct: 323 VVRMGLEENVYVGTSVVDMYSKCGRVEMARKAFQKIKEKNILSWSAMITGYGMHGHGQEA 382
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ---KSDTLMLN 263
+D+F + + G P+ +T +SV +AC G L+ +Y + K+ +
Sbjct: 383 LDIFNEMCRSGQNPNYITFISVLAACSHAGLLDKG----RYWYNAMKKRFGIEPGVEHYG 438
Query: 264 SLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
++D+ G+ G +D AY + E+ +P+ + W +++
Sbjct: 439 CMVDLLGRAGCLDEAYGLIKEMKVKPDAAIWGALL 473
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 205/362 (56%), Gaps = 2/362 (0%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+ L I+ M G +P+ YT +L + LF + GRQ+H+ ++ L+ N F + I
Sbjct: 499 RPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALI 558
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K E A F+ R L +W II +Q + ++A++ F +++ G +P++
Sbjct: 559 DMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEF 618
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ S C SL LE Q+H VF KS SD + ++L+DMY KCG M+ A +F
Sbjct: 619 TLAGCLSGCSSLASLEGGQQLHSMVF--KSGHVSDMFVGSALVDMYAKCGCMEEAEALFE 676
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ + + +W ++I GYA NG N+AL F M + GI P+ VTF G+LSAC H G V+E
Sbjct: 677 ALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEE 736
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
GK F M + I P H CMVD+LGR G +E ++ M + N +IW ++GA
Sbjct: 737 GKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGAS 796
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ N+ +GE A L EL+P + +Y++LSNI+A+ G W++V+R+R++M + + K P
Sbjct: 797 KMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPG 856
Query: 464 YS 465
S
Sbjct: 857 CS 858
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 155/312 (49%), Gaps = 4/312 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I + ++++ ++ M LP+ YT+ +L A+ L+ G+ +H+
Sbjct: 383 WSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW 442
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E++ + +++Y K G K+++ +R L SWNA ++GL G +
Sbjct: 443 KYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLT 502
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + GF P+ T +S+ +C L D+ QVH ++ +K++ + + +LIDM
Sbjct: 503 IFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI--IKNQLDDNNFVCTALIDM 560
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++ A F + ++ +WT +I YA +AL+ F M++ G++PN T
Sbjct: 561 YAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTL 620
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
G LS C ++ G+ M+ + F +VD+ + G +EEA A+ E +
Sbjct: 621 AGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG-SALVDMYAKCGCMEEAEALFEAL- 678
Query: 389 MKANVVIWGCLM 400
++ + + W ++
Sbjct: 679 IRRDTIAWNTII 690
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 147/302 (48%), Gaps = 6/302 (1%)
Query: 108 IYIF--MSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
IY+F M G++P+ +TL LKA AL++G+Q+H+ A +LGL + F S + L
Sbjct: 198 IYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDL 257
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+K G+ E A K+F PE+ +WN ++ G +Q G + +F + + + ++ T+
Sbjct: 258 YAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTL 317
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+V C + +L+ +H + +K + + + L+DMY KCG A VF I
Sbjct: 318 TTVLKGCANSKNLKQGQVIHSLI--IKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTI 375
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+P++ W+++I G + E++ FH MR PN T +LSA + G +Q G+
Sbjct: 376 KKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQ 435
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+ Y E A +V + + G + + + E M + +++ W +
Sbjct: 436 SIHACVWK-YGFETDVAVSNALVTMYMKNGCVHDGTKLYESM-VDRDLISWNAYLSGLHD 493
Query: 406 FG 407
G
Sbjct: 494 CG 495
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 159/336 (47%), Gaps = 9/336 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y + L ++ M V + +TL VLK L+ G+ +HSL +
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E NEF G + +YSK G A VF + + W+A+I L Q G+++E+I
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ P+ T+ S+ SA + G+L+ +H V+ K ++D + N+L+ M
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVW--KYGFETDVAVSNALVTM 459
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + K++ + ++ SW + + G G+ + L F++M E G PN TF
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ +L +C V G+ ++KN Q++ ++D+ + LE+A +
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKN--QLDDNNFVCTALIDMYAKCMYLEDADVAFNRL 577
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++ ++ W ++ + GE + ++++
Sbjct: 578 SVR-DLFTWTVII---TNYAQTNQGEKALNYFRQMQ 609
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 135/273 (49%), Gaps = 6/273 (2%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+L + + +H L V+ + + +++Y+K AR V + P+R + SW A+I
Sbjct: 127 SLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALIQ 186
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
GL +G A ++I +F ++ G P++ T+ + AC L+L Q+H F++
Sbjct: 187 GLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKL--GL 244
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + ++L+D+Y KCG ++LA K+F + + N +W ++ GYA G L F
Sbjct: 245 LLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCS 304
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC-MVDLLGRA 374
M E ++ N T VL C + +++G+ ++ F GC +VD+ +
Sbjct: 305 MMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI--GCGLVDMYSKC 362
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
GL +A + + + K ++V+W L+ ++ G
Sbjct: 363 GLAIDAIGVFKTIK-KPDIVVWSALITCLDQQG 394
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 80/153 (52%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F W II Y + +KAL+ + M + GV P+ +TL L L +LE G+QLHS+
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSM 642
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ G S+ F S + +Y+K G E+A +F+ R +WN II G +Q+G+ +A
Sbjct: 643 VFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKA 702
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
+ F + G PD VT + SAC G +E
Sbjct: 703 LTAFRMMLDEGISPDGVTFTGILSACSHQGLVE 735
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 231/423 (54%), Gaps = 14/423 (3%)
Query: 49 DPAKIVATQL----SKCTNLLQLNQIY-AHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
D +V T L SKC +L + I+ +H I ++A WN +I Y R +
Sbjct: 304 DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCR----FNAP--WNAMISGYLRSGFNE 357
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
KAL+++ M + + D YT V A L L +G+++H+ A++ GLE N S +
Sbjct: 358 KALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAV 417
Query: 164 S-LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
+ Y+K G E RKVF+ +R L SW +++ SQ +AI++F ++ G P+
Sbjct: 418 ANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQ 477
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T SV +C +L LE QVH + +V D + ++L+DMY KCG + A KVF
Sbjct: 478 FTFSSVLVSCANLCLLEYGQQVHGIICKVGLDM--DKCIESALVDMYAKCGCLGDAKKVF 535
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
I + SWT++I G+A +G+ ++AL F M + G+ PN VTF+ VL AC HGG V+
Sbjct: 536 NRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVE 595
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
EG +F++MK Y + P HY C+VDLL R G L +A + MP++ N ++W L+GA
Sbjct: 596 EGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGA 655
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C GNV++GE A+ + + + YV+LSN Y G +++ +R +MK + + K P
Sbjct: 656 CRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEP 715
Query: 463 AYS 465
S
Sbjct: 716 GCS 718
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 11/283 (3%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMS 113
VA SKC+++ +++ + S F W +I + + M
Sbjct: 111 VAHAYSKCSDIDAACRLFDQM-------SQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQ 163
Query: 114 RAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
G+ PD + +L+ L ++E+G +H+ V G S+ F + +++Y+K + E
Sbjct: 164 SQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIE 223
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
+ KVF+ E + SWNA+I G + + +A D+F+ + G PD T + V A G
Sbjct: 224 DSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIG 283
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE--IDQPNVS 291
L D+ A +V Y ++ S+TL+ +LIDM KCG + A +F I +
Sbjct: 284 MLRDVNKAKEVSGYALELGV--DSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNA 341
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
W +MI GY +G +AL+ F M ++ I +H T+ V +A
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNA 384
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+V + C L+ A VH ++ + K ++LN + Y KC +D A ++F +
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQ 130
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ Q N SWT +I G A NGL + + F M+ GI P+ + G+L C+ ++ G
Sbjct: 131 MSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELG 190
Query: 345 K 345
Sbjct: 191 N 191
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 216/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y+ +A+ ++ M + G+ + TL +LK++ A Q+H++++
Sbjct: 358 WNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISI 417
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + + + + Y K E A KVF+ P L ++ ++I SQ G +EA+
Sbjct: 418 KSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALK 477
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
M++ ++ +PD S+ +AC +L E Q+H +V +K SD NSL++M
Sbjct: 478 MYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHV--LKCGLLSDVFAGNSLVNM 535
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A +F EI + SW++MI G A +G +AL F+ M ++GI PNH+T
Sbjct: 536 YAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITL 595
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
V VLSAC H G V E + FF +M+ ++ I P HY CMVD+LGR G L+EA +V+ MP
Sbjct: 596 VSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMP 655
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+A+ +WG L+GA N+++G A+ L LEP G +++L+NIYAS G+W+ V +
Sbjct: 656 FQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAK 715
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK+ + K P S
Sbjct: 716 VRRSMKNSLVKKEPGMS 732
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 4/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I E AL + M V P +TL LKA + +++GRQLHS +
Sbjct: 257 WNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALM 316
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++ +E + F G I +YSK G + AR VFD P + + WN+II+G S G EA+
Sbjct: 317 KMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMS 376
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + K G E + T+ ++ + QVH +KS + D + NSL+D
Sbjct: 377 LFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVH--TISIKSGYQYDGYVANSLLDS 434
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKC ++ A KVF ++ ++TSMI Y+ GL EAL + M++ I+P+ F
Sbjct: 435 YGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIF 494
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +AC + ++GK + + FA +V++ + G +++A + +
Sbjct: 495 SSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAG-NSLVNMYAKCGSIDDASCIFNEIS 553
Query: 389 MKANVVIWGCLMGACEKFGN 408
+ +V W ++G + G+
Sbjct: 554 WRG-IVSWSAMIGGLAQHGH 572
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 44/285 (15%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI----DMFI------- 211
++LYSK F ARK+ ++ E L SW+A+I+G Q+GR +EA+ +M++
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 212 -----GLKKC------------------------GFEPDDVTMVSVTSACGSLGDLELAL 242
LK C G P++ ++ +V +AC L D +
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+VH Y+ +K SD N+L+DMY K G + A VF+EI +P++ SW ++I G
Sbjct: 209 KVHGYL--IKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVL 266
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
+ + AL M + P+ T L AC G V+ G+ + + F
Sbjct: 267 HEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFV 326
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
G ++D+ + GLL++AR + + MP K +V++W ++ G
Sbjct: 327 GVG-LIDMYSKCGLLQDARMVFDLMPXK-DVIVWNSIISGYSNCG 369
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 147/395 (37%), Positives = 220/395 (55%), Gaps = 36/395 (9%)
Query: 105 ALDIYIFMSR-AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
++ I++ M R +G LP+ YT V KA + G Q+ A+++GLESN F + I
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMI 74
Query: 164 SLYSKAGDFEKARKVFD-------------------------------ENPERKLGSWNA 192
+Y+ G ++AR+VFD E ER + SW
Sbjct: 75 RMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTT 134
Query: 193 IIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVK 252
IIAG Q G KEA+D+F + + G P++ T+ S +AC +L L+ +H Y+ K
Sbjct: 135 IIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYI--DK 192
Query: 253 SKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID--QPNVSSWTSMIVGYAANGLANEAL 310
S+ K + +L SL+DMY KCG +D A KVF + + V W +MI GYA +G + EA+
Sbjct: 193 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAI 252
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
D F M+ + PN VTFV +L+AC HG V+EG+ +F+ M + Y IEP HYGCMVDL
Sbjct: 253 DLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDL 312
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
LGR+GLL+EA V MPM + IWG L+GAC +++ G+ + K ++EL+ G +
Sbjct: 313 LGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH 372
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V+L+N+Y++ G W+E + +R ++ K P S
Sbjct: 373 VLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCS 407
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 45/315 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y ++ K+ALD++ M + G P+ +TL L A L AL+ GR +H
Sbjct: 132 WTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYID 191
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG--SWNAIIAGLSQDGRAKEA 206
+ ++ NE + + +Y+K G+ + A KVF + KL WNA+I G + G++KEA
Sbjct: 192 KSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEA 251
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F +K P+ VT V++ +AC S G L ++ + F+ S+
Sbjct: 252 IDLFEQMKVEKVSPNKVTFVALLNAC-SHGKL---VEEGRGYFK-------------SMA 294
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
YG +P + + M+ +GL EA + M + P+
Sbjct: 295 SSYGI---------------EPEIEHYGCMVDLLGRSGLLKEAEETVFNMP---MAPDAT 336
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV---DLLGRAGLLEEARAM 383
+ +L AC ++ G+ +++K E H GC V +L +G +EA+A+
Sbjct: 337 IWGALLGACRIHKDIERGQRIGKIIK-----ELDSDHIGCHVLLANLYSASGQWDEAKAV 391
Query: 384 VEGMPMKANVVIWGC 398
+ + + GC
Sbjct: 392 RQKIEVSGRKKTPGC 406
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 209/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I YT+ KAL + M G+ D L + A L AL+ G+Q+H+ A
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S+ ++ ++LYS+ G E++ F++ +WNA+++G Q G +EA+
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + ++ T S A +++ QVH + K+ S+T + N+LI M
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI--TKTGYDSETEVCNALISM 736
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K F E+ N SW ++I Y+ +G +EALD F M S +RPNHVT
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC H G V +G +FE M + Y + P+ HY C+VD+L RAGLL A+ ++ MP
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + ++W L+ AC N+++GE+ A HL ELEP YV+LSN+YA W+ +
Sbjct: 857 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 449 IRAVMKHRNLAKIPAYS 465
R MK + + K P S
Sbjct: 917 TRQKMKEKGVKKEPGQS 933
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 10/321 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++ E +A+ ++ M G++P Y VL A ++ +LEIG QLH L +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG S+ + + +SLY G+ A +F +R ++N +I GLSQ G ++A++
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G EPD T+ S+ AC + G L Q+H Y K S+ + +L+++
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT--TKLGFASNNKIEGALLNL 433
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++ A F E + NV W M+V Y + F M+ I PN T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVE 385
+L C+ G ++ G+ +++K +Q+ Y C ++D+ + G L+ A ++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILI 549
Query: 386 GMPMKANVVIWGCLMGACEKF 406
K +VV W ++ ++
Sbjct: 550 RFAGK-DVVSWTTMIAGYTQY 569
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 6/341 (1%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N I A I ++M S A +N +I ++ +KA++++ M G+ PD TL +
Sbjct: 338 NLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A L G+QLH+ +LG SN E ++LY+K D E A F E +
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
WN ++ + + +F ++ P+ T S+ C LGDLEL Q+H
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ +K+ + + + + LIDMY K G++D A+ + +V SWT+MI GY +
Sbjct: 516 I--IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+AL F M + GIR + V +SAC ++EG+ V +
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNAL 632
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
V L R G +EE+ E N+ W L+ ++ GN
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y L+ + + I+ M ++P+ YT P +LK +L LE+G Q+HS +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + N + S I +Y+K G + A + + + SW +IAG +Q +A+
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + G D+V + + SAC L L+ Q+H S SD N+L+ +
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA--CVSGFSSDLPFQNALVTL 635
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG+++ +Y F + + + +W +++ G+ +G EAL F M GI N+ TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 329 VGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++GK ++ K Y E + ++ + + G + +A +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN--ALISMYAKCGSISDAEKQFLEV 753
Query: 388 PMKANVVIWGCLMGACEKFG 407
K N V W ++ A K G
Sbjct: 754 STK-NEVSWNAIINAYSKHG 772
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 116 GVLPDCYTLPIVLKASCQLF-ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ P+ TL +L+ + +L+ GR+LHS ++LGL+SN Y GD
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC-- 232
A KVFDE PER + +WN +I L+ E +F+ + P++ T V AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
GS+ ++ Q+H + + + T++ N LID+Y + G +DLA +VF + + SS
Sbjct: 199 GSVA-FDVVEQIHARI--LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI G + N EA+ F M GI P F VLSAC ++ G+ +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL-- 313
Query: 353 NVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK--FGN 408
V ++ Y C +V L G L A + M + + V + L+ + +G
Sbjct: 314 -VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 371
Query: 409 VKMGEWVAKHLQELEPWSD 427
M + HL LEP S+
Sbjct: 372 KAMELFKRMHLDGLEPDSN 390
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 15/322 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ--LFALEIGRQLH 144
F WN +I+ + +++ M V P+ T VL+A C+ A ++ Q+H
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ + GL + + I LYS+ G + AR+VFD + SW A+I+GLS++
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI +F + G P SV SAC + LE+ Q+H V ++ SDT + N+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVCNA 328
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ +Y G + A +F + Q + ++ ++I G + G +A++ F M G+ P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEA 380
T ++ AC G + G+ + Y + FA G +++L + +E A
Sbjct: 389 SNTLASLVVACSADGTLFRGQQL-----HAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 381 RAMVEGMPMKANVVIWGCLMGA 402
++ NVV+W ++ A
Sbjct: 444 LDYFLETEVE-NVVLWNVMLVA 464
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 186/303 (61%), Gaps = 2/303 (0%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
I+ Y++ GD +AR FD P+R SW AIIAG +Q G +EA+ +F+ +K+ G +
Sbjct: 254 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 313
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
T S S C + LEL QVH V VK+ +S + N+L+ MY KCG +D AY VF
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRV--VKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 371
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
I++ V SW +MI GYA +G EAL F M+++GI P+ VT VGVLSAC H G V
Sbjct: 372 EGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD 431
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+G +F M Y I HY CM+DLLGRAG L++A+ +++ MP + + WG L+GA
Sbjct: 432 KGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
GN ++GE AK + E+EP + G YV+LSN+YA+ G W +V R+R M+ R + K+P
Sbjct: 492 SRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVP 551
Query: 463 AYS 465
YS
Sbjct: 552 GYS 554
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 2/210 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II Y + ++AL +++ M R G + T L ++ ALE+G+Q+H V
Sbjct: 281 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVV 340
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES + + + +Y K G+ + A VF+ E+++ SWN +IAG ++ G KEA+
Sbjct: 341 KAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALM 400
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +KK G PDDVTMV V SAC G ++ + + Y +++ +ID+
Sbjct: 401 LFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTE-YFYSMTQDYGITANSKHYTCMIDL 459
Query: 269 YGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
G+ GR+D A + + +P+ ++W +++
Sbjct: 460 LGRAGRLDDAQNLMKNMPFEPDAATWGALL 489
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 30/264 (11%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
E +E + IS Y++ G+ +A+++F+E+P R + +W A+++G Q+G EA +F G
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+ E + V+ ++ + ++ A + +F+ Q + N++I Y +
Sbjct: 211 MP----EKNSVSWNAIIAGYVQCKRMDQA----RELFEAMPCQNVSSW--NTMITGYAQN 260
Query: 273 GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
G + A F + Q + SW ++I GYA +G EAL F M+ G R N TF L
Sbjct: 261 GDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTL 320
Query: 333 SACVHGGKVQEGKHFFEMMKNVYQIEPRFA----HYGCMVD-----LLGRAGLLEEARAM 383
S C ++ GK Q+ R GC V + + G +++A +
Sbjct: 321 STCAEIAALELGK----------QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
EG+ K VV W ++ + G
Sbjct: 371 FEGIEEK-EVVSWNTMIAGYARHG 393
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 25/285 (8%)
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ AR +FD+ PER + SWNA+++G +Q+G KEA ++F + C + ++ + +
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-PC---KNSISWNGMLA 100
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
A G +E A ++ +SK + + N ++ Y K R+ A +F + + +
Sbjct: 101 AYVQNGRIEDARRL------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW +MI GYA NG E L+ ES +R + T+ ++S V G + E + F+
Sbjct: 155 VSWNTMISGYAQNG---ELLEAQRLFEESPVR-DVFTWTAMVSGYVQNGMLDEARRVFDG 210
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M E + ++ + +++AR + E MP + NV W ++ + G++
Sbjct: 211 MP-----EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITGYAQNGDIA 264
Query: 411 MGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMK 454
A++ + P D ++ + YA G EE + MK
Sbjct: 265 Q----ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMK 305
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 115/250 (46%), Gaps = 24/250 (9%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ +S Y++ G ++A+++FDE P + SWN ++A Q+GR ++A +F
Sbjct: 65 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE-------S 117
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
D ++S G + ++ + D + N++I Y + G + A
Sbjct: 118 KADWELISWNCMMGGYVKRNRLVDARGIFDRMPER---DEVSWNTMISGYAQNGELLEAQ 174
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
++F E +V +WT+M+ GY NG+ +EA F M E N V++ +++ V
Sbjct: 175 RLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCK 230
Query: 340 KVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
++ + + FE M +NV + + M+ + G + +AR + MP + + + W
Sbjct: 231 RMDQARELFEAMPCQNV-------SSWNTMITGYAQNGDIAQARNFFDRMPQR-DSISWA 282
Query: 398 CLMGACEKFG 407
++ + G
Sbjct: 283 AIIAGYAQSG 292
>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 234/473 (49%), Gaps = 73/473 (15%)
Query: 59 SKCTNLLQLNQIYAHIIRTHM---------------------LHSYS----------AAF 87
S CT L Q++AHI R ++ +H+Y F
Sbjct: 19 SHCTTLNHAKQLHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYPHLLFSQVHSPNPF 78
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFAL----EIGRQL 143
++ +IR Y R ++ +Y M V P +T LF+L +G QL
Sbjct: 79 LYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFS-------ALFSLLKNPSLGSQL 131
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK----------------- 186
H A G ++ + + I +Y K G + ARKVFDE P R
Sbjct: 132 HLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDM 191
Query: 187 --------------LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC 232
+ +W +++ G SQ+ K+A+ F +++ G D++T+V SAC
Sbjct: 192 DSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISAC 251
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
LG A + + + S+ + ++LIDMY KCG ++ AY VF + + NV S
Sbjct: 252 AQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFS 311
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
++SMIVG+A +G A A+ F+ M E+GI+PNHVTFVG+ +AC H G V++G+ F MK
Sbjct: 312 YSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMK 371
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
Y + P HY CM DLLGRAG LE+A +V+ MPM+ N +WG L+GA GN +
Sbjct: 372 ECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVA 431
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E ++ L ELEP + G Y++LS YA W++V R+R +M+ + L K P S
Sbjct: 432 EIASRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCS 484
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 240/452 (53%), Gaps = 18/452 (3%)
Query: 9 SLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLN 68
SL K+ P+ + C R L+T + ++ SKC + +
Sbjct: 3 SLLQFCAKNREPITGKACHGQVIRLG---------LETDTLTSNMLMNMYSKCGLIRRAC 53
Query: 69 QIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVL 128
+++ I M+ WN +I + +KA+DI++ M R G +T+ V+
Sbjct: 54 KVFDEIPERSMVS-------WNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVV 106
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLG 188
A + RQLH+ A++ ++++ F + I +Y+K G E A VF+ PER
Sbjct: 107 CACAAKGDVFFCRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDV 166
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
+W++I+AG Q+ +E + +F K+ G E + + SV AC L L QVH V
Sbjct: 167 TWSSIVAGFVQNELYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIV 226
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
++ + + ++L+DMY KCG ++ AY +F I++ NV W ++I G+A + ++E
Sbjct: 227 --CRTGFGPNNFVASALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSE 284
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
++ F M+++G++P+ VT+V VLSACVH G V +G+ +F++M + + P HY CMV
Sbjct: 285 VMNLFEEMQQTGMQPDEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMV 344
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
D+LGR GL+ EA ++ MP A +WG L+ +C GN+++ E AK+L E+EP G
Sbjct: 345 DILGRGGLVHEAHELMTKMPFAATASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGG 404
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
YV+L+N YA+ WEE + R +K + K
Sbjct: 405 NYVLLANTYAASKKWEEAAKARKSLKGSEILK 436
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 216/388 (55%), Gaps = 13/388 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II L ++I M V P+ +TL VL + + ++G Q+HSL+
Sbjct: 150 WTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLST 209
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG------LSQDG- 201
+LG ESN + + LY K G ++A+ +F+ + L +WNA+IAG L++D
Sbjct: 210 KLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNF 269
Query: 202 ----RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
EA+ M++ L + G +PD T+ S+ + C L LE Q+H +KS S
Sbjct: 270 SAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT--IKSGFLS 327
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D ++ +L+DMY KCG ++ A K F ++ + SWTSMI +A +G + AL F MR
Sbjct: 328 DVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMR 387
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+G RPN +TFVGVL+AC H G V E +FE+M+ Y+I+P HYGC+VD+ R G L
Sbjct: 388 LAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRL 447
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+EA +++ M ++ N IW L+ C GN ++G + A+ L +L+P S YVVL N+Y
Sbjct: 448 DEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMY 507
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
S WE+V +R +MK + K+ +S
Sbjct: 508 ISAERWEDVSMVRRLMKEEKVGKLKDWS 535
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 179/376 (47%), Gaps = 26/376 (6%)
Query: 46 THED--PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
THE+ + +KC ++ +++ ++ R +++ W ++ Y + P+
Sbjct: 11 THEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVV-------WTTLMTGYVQNSQPE 63
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
A++++ M +G P +TL I L A L ++ +G+Q H+ ++ + + +
Sbjct: 64 VAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALC 123
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
SLYSK G + + K F E E+ + SW II+ +GRA + +FI + EP+D
Sbjct: 124 SLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDF 183
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T+ SV S C ++ +L +QVH K +S+ + NSL+ +Y KCG +D A +F
Sbjct: 184 TLTSVLSLCSTIQSSDLGMQVHS--LSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 284 EIDQPNVSSWTSMIVGYA-----------ANGLANEALDCFHYMRESGIRPNHVTFVGVL 332
++ N+ +W +MI G+A A EAL + + SG +P+ T +L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301
Query: 333 SACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA 391
+ C +++G+ + +K+ + + +VD+ + G +E AR M +
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVG--TALVDMYDKCGSIERARKAFLDMSTRT 359
Query: 392 NVVIWGCLMGACEKFG 407
++ W ++ + + G
Sbjct: 360 -LISWTSMITSFARHG 374
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 16/266 (6%)
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+ ++ G F S +++Y+K G ARKVFD P R + W ++ G Q+ +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
+ A+++F + + G P + T+ +AC SL + L Q H ++ +K + D+ +
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFI--IKYRISHDSSIG 119
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+L +Y K G +D + K F E + +V SWT++I NG A L F M +
Sbjct: 120 NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVE 179
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH------YGCMVDLLGRAGL 376
PN T VLS C +Q ++ V+ + + H +V L + G
Sbjct: 180 PNDFTLTSVLSLC---STIQSS----DLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGC 232
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
++EA+ + M K N++ W ++
Sbjct: 233 IDEAKNLFNRMEYK-NLITWNAMIAG 257
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL ++ M R+ P+ +T VL + + L +G+Q+H L V
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +S+ F S + +Y+KAG ++AR++F+ PER + S AIIAG +Q G +EA++
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L G P+ VT S+ +A L L+ Q H +V ++ + ++ NSLIDM
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV--LRRELPFYAVLQNSLIDM 298
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVT 327
Y KCG + A ++F + + SW +M+VGY+ +GL E L+ F MR E ++P+ VT
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 328 FVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ VLS C HG G + F+ M+ Y +P HYGC+VD+LGRAG ++EA ++
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP K + G L+GAC +V +GE V + L E+EP + G YV+LSN+YAS G W +V
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+RA+M + + K P S
Sbjct: 479 NNVRAMMMQKAVTKEPGRS 497
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L A AL G+++H+ ++ + + + Y K E ARKV DE PE+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I+ SQ G + EA+ +F + + +P++ T +V ++C L L Q+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ VK S + +SL+DMY K G++ A ++F + + +V S T++I GYA GL
Sbjct: 178 LI--VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-----------FFEMMKNVY 355
EAL+ FH + G+ PN+VT+ +L+A + GK F+ +++N
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN-- 293
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G L AR + + MP + + W ++ K G
Sbjct: 294 ----------SLIDMYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHG 334
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 8/226 (3%)
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAI-DMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+ F +P + I+ L +GR +EA+ +M + + GF D ++ +AC
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYD----ALLNACLDK 65
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L +VH ++ +K++ T + L+ YGKC ++ A KV E+ + NV SWT+
Sbjct: 66 RALRDGQRVHAHM--IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI Y+ G ++EAL F M S +PN TF VL++C+ + GK ++ +
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-W 182
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ ++D+ +AG ++EAR + E +P + V + G
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 213/379 (56%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC--YTLPIVLKASCQLFALEIGRQLHSL 146
WN +I + + L ++ M + G+ D TL VLK++ A+ RQ+H+L
Sbjct: 375 WNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHAL 434
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A ++GL S+ +G I Y K G + A KVF E+ + S ++ LSQ ++A
Sbjct: 435 AEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDA 494
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
I +F+ + + G EPD + S+ +AC SL E QVH ++ +K + SD N+L+
Sbjct: 495 IKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL--IKRQFTSDVFAGNALV 552
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y KCG ++ A F + + + SW++MI G A +G ALD FH M + G+ PNH+
Sbjct: 553 YAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHI 612
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
T VLSAC H G V + K +FE MK + I+ HY CM+D+LGRAG LE+A +V
Sbjct: 613 TLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMELVNN 672
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP +AN +WG L+GA + ++G A+ L LEP G +V+L+N YAS G+W+E+
Sbjct: 673 MPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEM 732
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +MK N+ K PA S
Sbjct: 733 AKVRKLMKDSNVKKEPAMS 751
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 162/323 (50%), Gaps = 11/323 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W++++ Y+ P+ AL + M GV + + LP+VLK + + G Q+H+LAV
Sbjct: 71 WSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV---RFGAQVHALAV 127
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDE----NPERKLGSWNAIIAGLSQDGRAK 204
L + F + +++Y G ++AR++FDE ER SWN +I+ ++ ++
Sbjct: 128 ATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSG 187
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+AI +F + G P++ V +AC DLE QVH V V++ + D N+
Sbjct: 188 DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAV--VRTGYEKDVFTANA 245
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+DMY K G +++A VF ++ +V SW + I G +G + AL+ M+ SG+ PN
Sbjct: 246 LVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T VL AC G G+ M F G +VD+ + G L++AR +
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVG-LVDMYAKHGFLDDARKVF 364
Query: 385 EGMPMKANVVIWGCLMGACEKFG 407
+ MP + ++++W L+ C G
Sbjct: 365 DFMPRR-DLILWNALISGCSHDG 386
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 124/251 (49%), Gaps = 4/251 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I Y + + A+ ++ M +G P+ + V+ A LE GRQ+H
Sbjct: 170 AVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHG 229
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
VR G E + F + + +YSK GD E A VF++ P + SWNA I+G G
Sbjct: 230 AVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHR 289
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+++ + +K G P+ T+ SV AC G L Q+H F VK+ D + L
Sbjct: 290 ALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHG--FMVKAVADFDEFVAVGL 347
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRP 323
+DMY K G +D A KVF + + ++ W ++I G + +G E L FH MR+ G +
Sbjct: 348 VDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDV 407
Query: 324 NHVTFVGVLSA 334
N T VL +
Sbjct: 408 NRTTLASVLKS 418
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 18/283 (6%)
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
S LFA G LHS ++ GL + + ++LYS+ AR VFDE P+ SW
Sbjct: 17 SRSLFA---GAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSW 71
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
++++ S +G ++A+ F ++ G P + + V C D+ QVH
Sbjct: 72 SSLVTAYSNNGMPRDALLAFRAMRGRGV-PCNEFALPVVLKCAP--DVRFGAQVH--ALA 126
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI----DQPNVSSWTSMIVGYAANGLA 306
V ++ D + N+L+ +YG G +D A ++F E + N SW +MI Y N +
Sbjct: 127 VATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQS 186
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYG 365
+A+ F M SG RPN F V++AC ++ G+ +++ Y+ + A+
Sbjct: 187 GDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTAN-- 244
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+VD+ + G +E A + E MP A+VV W + C G+
Sbjct: 245 ALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGH 286
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 224/416 (53%), Gaps = 38/416 (9%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFM-----SRAGVLPDCYTLPIVLKASCQLFALEIG 140
AF +N +IR Y + A+ ++ M PD +T P V+K L +G
Sbjct: 51 AFLYNAMIRAYKHNKVYILAITVHKQMLGHSHGENPXFPDKFTFPFVVKXCAGLMCYNLG 110
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG---L 197
+Q+H A + G +SN E+ + +Y K + A +VF+E ER SWN +I+G L
Sbjct: 111 KQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRVFEEMTERDAVSWNTLISGHVRL 170
Query: 198 SQDGRAKE----------------------------AIDMFIGLKKCGFEPDDVTMVSVT 229
Q RA+ A++ F ++ E D++++VSV
Sbjct: 171 GQMRRARAIFEELQDKTIFSWTAIVSGYARIGCHAVALEFFRRMQMVDIELDEISLVSVL 230
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
AC LG LEL +H ++ K+ D + N+LI++Y K G MD ++F ++++ +
Sbjct: 231 PACAQLGALELGKWIH--IYADKAGFLRDICVCNALIEVYAKRGSMDEGRRLFHKMNERD 288
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW++MIVG A +G A EA++ F M+++ + PN +TFVG+LSAC H G + EG +FE
Sbjct: 289 VISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAGLLNEGLGYFE 348
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
M+ IEP HYGC+V+LLG +G L++A +++ MPMK + IWG L +C GN+
Sbjct: 349 SMERDDNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSDIWGLLSSSCRSHGNL 408
Query: 410 KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ +HL ELEP G Y+ LSN+YA G W+ V R+R +M + + K P S
Sbjct: 409 EIVAIAMEHLLELEPDDTGNYITLSNLYADLGKWDGVSRMRKLMSSKYMNKTPGCS 464
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/435 (32%), Positives = 231/435 (53%), Gaps = 10/435 (2%)
Query: 31 FRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWN 90
F K+V +S + + I+ +KC NLL ++++ + + WN
Sbjct: 334 FGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGM-------KCKDSVSWN 386
Query: 91 NIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRL 150
++I +Y + + +A+ ++ M + V PD T ++L S QL L +G++LH ++
Sbjct: 387 SMINVYIQNGSFDEAMKLFKMM-KTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKM 445
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
G SN + + +Y+K G+ + KVF+ R + +WN IIA + M
Sbjct: 446 GFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMI 505
Query: 211 IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
++ G PD TM+S+ C L ++H +F++ +SD + N LI+MY
Sbjct: 506 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLG--LESDVPVGNVLIEMYS 563
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
KCG + +++VF + +V +WT++I G +A+ F M +GI P+HV FV
Sbjct: 564 KCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVA 623
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
++ AC H G V+EG ++F MK Y+IEPR HY C+VDLL R+ LL++A + MP+K
Sbjct: 624 IIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLK 683
Query: 391 ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
+ IWG L+ AC G+ ++ E V++ + EL P G YV++SNIYA+ G W++V IR
Sbjct: 684 PDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIR 743
Query: 451 AVMKHRNLAKIPAYS 465
+K R L K P S
Sbjct: 744 KSIKARGLKKDPGCS 758
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 19/334 (5%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE 138
++ Y+A +WN + +Y R GV+PD YT+ VL+A L ++E
Sbjct: 187 LISGYNANGYWNEALEIYYRFR-------------NLGVVPDSYTMSSVLRACGGLGSVE 233
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
G +H L ++G++ + +G +S+Y K R++FD+ R SWN +I G S
Sbjct: 234 EGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYS 293
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSD 258
Q G +E+I +F+ + F+PD +T+ S+ ACG LGDLE VH Y+ + S + D
Sbjct: 294 QVGLYEESIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKYVHDYM--ITSGYECD 350
Query: 259 TLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRE 318
T N LI+MY KCG + + +VF + + SW SMI Y NG +EA+ F M+
Sbjct: 351 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK- 409
Query: 319 SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLE 378
+ ++P+ VT+V +LS G + GK + + +VD+ + G +
Sbjct: 410 TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKM-GFNSNIVVSNTLVDMYAKCGEMG 468
Query: 379 EARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
++ + E M + +++ W ++ +C + +G
Sbjct: 469 DSLKVFENMKAR-DIITWNTIIASCVHSEDCNLG 501
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 163/308 (52%), Gaps = 6/308 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ WN+IIR T +AL +Y R + PD YT P V+ A L E+ + +H
Sbjct: 81 YLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDR 140
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ +G S+ + + I +Y + D +KARKVF+E P R + SWN++I+G + +G EA
Sbjct: 141 VLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEA 200
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++++ + G PD TM SV ACG LG +E +H + ++ K+ D ++ N L+
Sbjct: 201 LEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKK--DVIVNNGLL 258
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
MY K + ++F ++ + SW +MI GY+ GL E++ F M +P+ +
Sbjct: 259 SMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLL 317
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T +L AC H G ++ GK+ + M+ + Y+ + ++ ++++ + G L ++ +
Sbjct: 318 TITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI--LINMYAKCGNLLASQEVFS 375
Query: 386 GMPMKANV 393
GM K +V
Sbjct: 376 GMKCKDSV 383
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 160/327 (48%), Gaps = 10/327 (3%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I Y+++ ++++ +++ M PD T+ +L+A L LE G+ +H
Sbjct: 282 AVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHD 340
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+ G E + + I++Y+K G+ +++VF + SWN++I Q+G E
Sbjct: 341 YMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDE 400
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F + K +PD VT V + S LGDL L ++H + K S+ ++ N+L
Sbjct: 401 AMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDL--AKMGFNSNIVVSNTL 457
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG M + KVF + ++ +W ++I + N L MR G+ P+
Sbjct: 458 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 517
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ--IEPRFAHYGCMVDLLGRAGLLEEARAM 383
T + +L C ++GK E+ +++ +E ++++ + G L + +
Sbjct: 518 ATMLSILPVCSLLAAKRQGK---EIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQV 574
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVK 410
+ M K +VV W L+ AC +G K
Sbjct: 575 FKLMKTK-DVVTWTALISACGMYGEGK 600
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 3/204 (1%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD-ENPERKLGSWNAIIAGLSQD 200
+LHSL + LGL + + I+ Y+ D + VF +P + WN+II L+ +
Sbjct: 34 KLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHN 93
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G EA+ ++ ++ +PD T SV +AC L D E+A +H V + SD
Sbjct: 94 GLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGF--GSDLY 151
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+LIDMY + +D A KVF E+ +V SW S+I GY ANG NEAL+ ++ R G
Sbjct: 152 IGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLG 211
Query: 321 IRPNHVTFVGVLSACVHGGKVQEG 344
+ P+ T VL AC G V+EG
Sbjct: 212 VVPDSYTMSSVLRACGGLGSVEEG 235
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/372 (38%), Positives = 209/372 (56%), Gaps = 2/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W II ++ E + +L +++ M + P+ T L A L ALE GRQ+H L
Sbjct: 57 WTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVW 116
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG++SN ES + LYSK G E AR+VF+ E S I+ G +Q+G +EAI+
Sbjct: 117 KLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIE 176
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F+ + G E D + +V ACG L L Q+H V +K S+ + N LI+M
Sbjct: 177 FFVKMVNIGTEVDPNMVSAVLGACGVDTSLGLGKQIHSLV--IKRSLGSNPFVGNGLINM 234
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + + KVF + N SW SMI +A +G AL + M + G P +TF
Sbjct: 235 YSKCGELQESIKVFNGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTF 294
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ +L AC H G V +G F + M VY I PR HY C+VD+LGRAGLL EA++++E +
Sbjct: 295 LSLLHACSHVGLVDKGMKFLKSMTKVYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLS 354
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K +V+IW L+GAC G+ ++G++ A+ L LEP YV+L+NIY+S+G W+E R
Sbjct: 355 IKPDVLIWQALLGACSIRGDTEIGKYAAEQLLLLEPKKPAPYVLLANIYSSKGRWDERAR 414
Query: 449 IRAVMKHRNLAK 460
MK +AK
Sbjct: 415 TIKRMKEMGVAK 426
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 135/249 (54%), Gaps = 10/249 (4%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPD 221
+S + + GD + R+VFDE ER + +W AII+GLSQ+ ++++ +F+ + +CG EP+
Sbjct: 30 VSGFLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQM-RCGLIEPN 88
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
+T +S +AC L LE Q+H V+++ +S+ + ++L+D+Y KCG ++ A +V
Sbjct: 89 FLTYLSSLTACSGLQALEKGRQIHGLVWKLGI--QSNLCIESALMDLYSKCGSLEDARRV 146
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG--IRPNHVTFVGVLSACVHGG 339
F + + S T ++VG+ NG EA++ F M G + PN V+ VL AC
Sbjct: 147 FESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVS--AVLGACGVDT 204
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ GK ++ F G ++++ + G L+E+ + G+ + N V W +
Sbjct: 205 SLGLGKQIHSLVIKRSLGSNPFVGNG-LINMYSKCGELQESIKVFNGLTCR-NSVSWNSM 262
Query: 400 MGACEKFGN 408
+ A + G+
Sbjct: 263 IAAFARHGD 271
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 7/208 (3%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
DT+ N+++ + + G +D +VF E+ + NV +WT++I G + N + ++L F MR
Sbjct: 22 DTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMR 81
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
I PN +T++ L+AC +++G+ ++ + I+ ++DL + G L
Sbjct: 82 CGLIEPNFLTYLSSLTACSGLQALEKGRQIHGLVWKL-GIQSNLCIESALMDLYSKCGSL 140
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ---ELEPWSDGAYVVLS 434
E+AR + E V + L+G + + E+ K + E++P A +
Sbjct: 141 EDARRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEVDPNMVSAVLGAC 200
Query: 435 NIYASRGLWEEVERIRAVMKHRNLAKIP 462
+ S GL ++ I +++ R+L P
Sbjct: 201 GVDTSLGLGKQ---IHSLVIKRSLGSNP 225
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG A KVF ++ + SW +M+ G+ NG + F M E N +T
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLER----NVIT 56
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL--LEEAR---A 382
+ ++S ++ F M+ IEP F Y + L +GL LE+ R
Sbjct: 57 WTAIISGLSQNEMYEDSLGLFVQMR-CGLIEPNFLTY--LSSLTACSGLQALEKGRQIHG 113
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS 426
+V + +++N+ I LM K G+++ V + EL+ S
Sbjct: 114 LVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVS 157
>gi|326509777|dbj|BAJ87104.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 151/474 (31%), Positives = 245/474 (51%), Gaps = 63/474 (13%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRT----------HMLHSYSAAFHWNNIIRLYTRLE 100
A A+ L+ C+ + ++++A ++R + +Y+A+ ++ + L R +
Sbjct: 24 ADRAASLLAACSTARRASELHAAVVRKGLDSDRAVAFRLQRAYAASGRLDHSLTLLGRTK 83
Query: 101 APKK------------------ALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
P L + M G+LP +TL L A C+ L +GR
Sbjct: 84 DPTTIFYTSAIHAHSSRGLHLPGLALLSDMLSEGLLPTAHTLSASLPA-CR--GLSLGRA 140
Query: 143 LHSLAVRLGLESNEFCESGFISLY-------------------------------SKAGD 171
LH+ A +L L + + + +S+Y + G
Sbjct: 141 LHAYAFKLALSGDSYVATALLSMYARAGDAAAARALFDEMPDPHVVSVTAMLTCYANMGA 200
Query: 172 FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+ AR++FD P + WNA+I G +Q G+ EA+ +F + + EPD+VT+V V SA
Sbjct: 201 LDDARRLFDGLPRKDFICWNAMIDGYTQHGKPNEALQLFRRMLRSSAEPDEVTVVLVLSA 260
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVS 291
LG +E +H YV + Q + + +L+DMY KCG ++ A VF I ++
Sbjct: 261 VAQLGTVESGKWLHSYVKNSRCVQL-NVRVATALVDMYCKCGSLEDAVAVFHGIGNKDIV 319
Query: 292 SWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
W +MI GYA +G + +AL+ F +R+ G+ P +TF+G+L+AC H G V+EG+ FF+ M
Sbjct: 320 VWNAMINGYAMHGDSRKALEMFVQLRDQGLWPTDITFIGLLNACSHSGLVEEGRSFFQSM 379
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKM 411
++ Y I+P+ HYGCMVDLLGRAGL+EEA +V+ + + + V+W L+ AC N+ +
Sbjct: 380 EHEYGIDPKIEHYGCMVDLLGRAGLIEEAFHLVQSLTITPDAVMWVSLLAACRLHKNMAL 439
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+ +A L + G Y++LSNIYA+ G WEEV R+R++MK + K P S
Sbjct: 440 GQRIADFLVANGLANSGMYILLSNIYAAVGKWEEVARVRSMMKASGIQKEPGCS 493
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/408 (37%), Positives = 219/408 (53%), Gaps = 33/408 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL----- 143
WN+II Y + KK LD++ M V D T+ + A+C L E+G L
Sbjct: 141 WNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYID 200
Query: 144 -HSLAVRLGL-------------------------ESNEFCESGFISLYSKAGDFEKARK 177
H + V L L E N + I Y+K G+ A+K
Sbjct: 201 EHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKK 260
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+F+E P R + SW ++I G S + EA+ +F + +PD++T+ + SAC LG
Sbjct: 261 LFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGS 320
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+ VH Y+ K KSD + NSLIDMY KCG ++ A +VF ++ + SWTS+I
Sbjct: 321 LDAGEAVHDYI--RKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSVSWTSII 378
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G A NG A AL+ F M + GI P H TFVGVL AC H G V +G F+ M+N Y++
Sbjct: 379 SGLAVNGFAESALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRL 438
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
P HYGC+VDLL R+G L+ A ++ MP+ +VVIW L+ AC+ GN+ + E V+K
Sbjct: 439 APEMKHYGCVVDLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSK 498
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L L+P ++G YV+ S+ YA W++V +IR +M+ NL K AYS
Sbjct: 499 KLLVLDPSNNGNYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYS 546
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 34/336 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I ++ + P A+ Y M G+ T + K+ ++ + G+ + ++
Sbjct: 40 WNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSM 99
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG ES F + I +Y G+ A+KVFD ER + SWN+II G Q R K+ +D
Sbjct: 100 KLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNRFKKVLD 159
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ D VTM+ SA L + E+ + KY+ + D + N+LIDM
Sbjct: 160 LFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDE--HGVVVDLYLGNTLIDM 217
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG-------LAN-------------- 307
YG+ G +D A +VF+++ + N+ SW +MI+GYA G L N
Sbjct: 218 YGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVISWTSMI 277
Query: 308 ----------EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
EA+ F M S ++P+ +T LSAC H G + G+ + ++ + I
Sbjct: 278 IGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK-HDI 336
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
+ ++D+ + G++E+A + M + +V
Sbjct: 337 KSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV 372
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 174 KARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
KA VF++ L WN +I GLS+ R +AI + + G + +T + + +C
Sbjct: 24 KAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCA 83
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
+ D+ V V +K +S + + N+LI MY G + +A KVF + + +V SW
Sbjct: 84 RVSDVRQGQMVR--VHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGMLERDVVSW 141
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
S+I GY + LD F M+ +R + VT + +SA + + G + + +
Sbjct: 142 NSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDE 201
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ + ++D+ GR G+++ A + M K N+V W ++ K GN+
Sbjct: 202 -HGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEK-NIVSWNAMIMGYAKVGNL 255
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 46/222 (20%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A+ VF +I +P + W MI G + + N+A+ ++ M GI+ +H+TF+ + +C
Sbjct: 25 AHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCAR 84
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA----GLLEEARAMVEGMPMKANV 393
V++G+ M V+ ++ F + + L G L A+ + +GM ++ +V
Sbjct: 85 VSDVRQGQ-----MVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDGM-LERDV 138
Query: 394 VIWGCLMGACEKFGNVKMGEWVAKHLQE-------------------LEPWSDGAYVV-- 432
V W ++ +F K + + +Q L W G Y+V
Sbjct: 139 VSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKY 198
Query: 433 ---------------LSNIYASRGLWEEVERIRAVMKHRNLA 459
L ++Y RG+ + R+ MK +N+
Sbjct: 199 IDEHGVVVDLYLGNTLIDMYGRRGMIDFAGRVFYQMKEKNIV 240
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 207/360 (57%), Gaps = 7/360 (1%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+++ M GV PD YT +LKA A E GRQ H +AV+ G +E+ I++Y+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
+ GD AR +FD + S+NA+I + EA+ +F ++ G +P VT++S
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML--NSLIDMYGKCGRMDLAYKVFWEI 285
V SAC LG LEL +H Y+ K + D+L+ +LIDMY KCG ++ A VF ++
Sbjct: 245 VLSACALLGALELGRWIHDYI----RKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ + +W+ M+V YA +G EA+ F M++ G++P+ VTF+GVL AC H G V EG
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+F+ M+ Y I HYGC+ DLL R+G LE A ++ +P+K ++W L+ AC
Sbjct: 361 QYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+V MG+ V + + EL+ G YV+ SN+ A+ G WEE+ +R +M + + K+P S
Sbjct: 420 HGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCS 479
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 3/380 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHS 145
F W + Y R + ++AL+++ M R + +T+ L AS + +L +G+++H
Sbjct: 187 FSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHG 246
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
+R+GL+ + S +Y K G +AR +FD+ +R + SW A+I ++GR +E
Sbjct: 247 HILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREE 306
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
+F L K G P++ T V +AC EL QVH Y+ ++ S ++L
Sbjct: 307 GFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSS--FAASTL 364
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+ MY KCG + A +VF + +P++ SWTS+I GYA NG +EAL F + +SG +P+H
Sbjct: 365 VHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDH 424
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TFVGVLSAC H G V +G +F+ +K + + HY C++DLL R+G L+EA +++
Sbjct: 425 ITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIID 484
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MP++ + +W L+G C GN+K+ + A+ L E+EP + Y L+NIYA+ GLW
Sbjct: 485 KMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGG 544
Query: 446 VERIRAVMKHRNLAKIPAYS 465
V +R VM R + K P S
Sbjct: 545 VAEVRKVMDARGVVKKPGLS 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 186/405 (45%), Gaps = 38/405 (9%)
Query: 6 PGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLL 65
P I + + + L+ RLCK + F++ + I L + L
Sbjct: 36 PPIHNTFFKSGAKDELVKRLCKDNNFKEAIDI--------------------LCEQKRLR 75
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLP 125
+ QI H+ R +A ++ +++L +L A + + ++ +G +P
Sbjct: 76 EAIQILDHVDR-------PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISN 128
Query: 126 IVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE-SGFISLYSKAGDFEKARKVFDENPE 184
+L + +L ++L + + C + IS Y+KAG ++ARK+FD+ E
Sbjct: 129 RILDMYIKCNSLVNAKRLFD-----EMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTE 183
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQ 243
R SW A+ +G + + +EA+++F +++ F+ + TM S +A ++ L L +
Sbjct: 184 RDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKE 243
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
+H ++ ++ D ++ ++L DMYGKCG + A +F + +V SWT+MI Y
Sbjct: 244 IHGHILRI--GLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKE 301
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G E F + +SGI PN TF GVL+AC + GK M + +P
Sbjct: 302 GRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRI-GFDPSSFA 360
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+V + + G ++ AR + GMP + ++V W L+ + G
Sbjct: 361 ASTLVHMYTKCGNIKNARRVFNGMP-RPDLVSWTSLISGYAQNGQ 404
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 211/380 (55%), Gaps = 2/380 (0%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I + ++AL + M R G +PD +TL VL + ++ G +H
Sbjct: 135 AVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHG 194
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
A++ G +++ F S I +Y+ + + KVFD + WN+++AG +Q+G +E
Sbjct: 195 YAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEE 254
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F + + G P VT S+ A G+L L L Q+H Y+ ++++ + + +SL
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYL--IRARFNDNIFISSSL 312
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
IDMY KCG +D+A +VF I P++ SWT+MI+GYA +G EA F M ++PNH
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+TF+ VL+AC H G V G +F M N Y P H + D LGRAG L+EA +
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
M +K +W L+ AC N + E VAK + ELEP S G++V+LSN+Y++ G W E
Sbjct: 433 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492
Query: 446 VERIRAVMKHRNLAKIPAYS 465
++R M+ + + K PA S
Sbjct: 493 AAQLRKSMRIKGMKKEPACS 512
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 157/339 (46%), Gaps = 36/339 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCY---TLPIVLKASCQLFALEIGRQLHS 145
W IR+ A+ +++ M RA V P +LP LK+ L + LH+
Sbjct: 15 WAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 146 LAVRLGLESNEFCESGFISLYSK--------------------AGDFEKARKVFDENPER 185
LA+R G ++ F + ++L K + +E RKVFDE ER
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
SWN +I G ++ R +EA+ M + + GF PD T+ +V D++ + VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
Y +K+ +D + +SLIDMY C +MD + KVF + W SM+ GYA NG
Sbjct: 194 GYA--IKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGS 251
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH-- 363
EAL F M ++G+RP VTF ++ A + ++ GK + Y I RF
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQL-----HAYLIRARFNDNI 306
Query: 364 --YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
++D+ + G ++ AR + G+ ++V W ++
Sbjct: 307 FISSSLIDMYCKCGNVDIARRVFNGI-QSPDIVSWTAMI 344
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 223/445 (50%), Gaps = 70/445 (15%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y +AL I+ M PD YT P VLKA L L +G Q+H V
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 149 RLGLESNEFCESGFISL-------------------------------YSKAGDFEKARK 177
++GL++N F + +++ Y+++G F+ A +
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224
Query: 178 V-------------------------------------FDENPERKLGSWNAIIAGLSQD 200
+ F+ ++ L SWN +IA +
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
EA+ +F+ +++CG +PD VT+ S+ ACG L L L ++HKY+ K + + L
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYI--EKGNLQPNLL 342
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+L+DMY KCG ++ A VF ++ +V SWTSM+ Y +G +A+ F M +SG
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ + FV VLSAC H G + +G+H+F MM Y I PR H+ CMVDL GRAG +EEA
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ ++ MPM+ N +WG L+ AC + +G A L +L P G YV+LSNIYA
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKA 522
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G+W++V +R MK + K+P S
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 23/304 (7%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
YS G+ AR +FD + E+ + +N +I + EA+ +F + C F PD T
Sbjct: 81 YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V AC L +L + LQVH + VK ++ + N+L+ MYGKCG + A KV ++
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAI--VKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG--KVQE 343
+V SW SM+ GYA +G ++AL+ M + + T + + VQ
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEGMPMKANVVIWGCLM 400
+ FE M + + M+ + + EA ++ +E MK + V L+
Sbjct: 259 IHNMFERMT-----KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 401 GACEKFGNVKMGEWVAKHLQE--LEPWSDGAYVVLSN----IYASRGLWEEVERIRAVMK 454
AC + +G + K++++ L+P ++L N +YA G EE + M+
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQP-----NLLLENALLDMYAKCGCLEEARDVFDKMR 368
Query: 455 HRNL 458
R++
Sbjct: 369 LRDV 372
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 147/410 (35%), Positives = 222/410 (54%), Gaps = 9/410 (2%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T SKC +L + ++ I + W ++I + ++A+ ++ M
Sbjct: 315 TMYSKCGSLEESYSLFQEI-------PFKDNACWASMISGFNEYGYLREAIGLFSEMLDE 367
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G PD TL VL L +L +++H +R G++ S ++ YSK G + A
Sbjct: 368 GTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLA 427
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKV+D PE S +++I+G SQ G ++ +F + GF D + S+ A
Sbjct: 428 RKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLS 487
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
+ EL QVH Y+ ++ ++ + +SL+ MY K G ++ K F +I+ P++ +WT+
Sbjct: 488 EESELGAQVHAYITKIG--LCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTA 545
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I YA +G ANEAL + M+E G +P+ VTFVGVLSAC HGG V+EG M Y
Sbjct: 546 LIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDY 605
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
IEP HY CMVD LGR+G L EA + P+K + ++WG L+ AC+ +G+V++G+
Sbjct: 606 GIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLA 665
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
AK ELEP GAYV LSNI A G W+EVE R +MK + K P +S
Sbjct: 666 AKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 715
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 153/336 (45%), Gaps = 31/336 (9%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ WN II R + D++ M PD YT VL A L L G+ + +
Sbjct: 39 YCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQAR 98
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G E C S + LY+K G +AR+VF + SW +++G ++ A A
Sbjct: 99 VIKCGAEDVFVCTS-IVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSA 157
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++F ++ G E + T+ SV SACG + A QVH +VF KS DT + +LI
Sbjct: 158 LEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVF--KSGFYLDTSVAAALI 215
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTS-MIVGYAANGLANEALDCFHYMRESGIRPNH 325
M K G ++L+ +VF ++D + + M+ ++ N +A+ F M + G+ P+
Sbjct: 216 SMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDE 275
Query: 326 VTFVGVLSA--CVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL---------GRA 374
+ +LS C++ GK Q+ G ++DL +
Sbjct: 276 FSVCSLLSVLDCLNLGK---------------QVHSYTLKSGLILDLTVGSSLFTMYSKC 320
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
G LEE+ ++ + +P K N W ++ ++G ++
Sbjct: 321 GSLEESYSLFQEIPFKDNAC-WASMISGFNEYGYLR 355
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 130/247 (52%), Gaps = 5/247 (2%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N ++ +++ + P KA+ ++ M + G+ PD +++ +L L L +G+Q+HS ++
Sbjct: 244 NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLK 300
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
GL + S ++YSK G E++ +F E P + W ++I+G ++ G +EAI +
Sbjct: 301 SGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGL 360
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + G PD+ T+ +V + C SL L + ++H Y +++ + ++L++ Y
Sbjct: 361 FSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYT--LRAGIDRGMPLGSALVNTY 418
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
KCG + LA KV+ + + + S +S+I GY+ +GL + F M SG +
Sbjct: 419 SKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAIS 478
Query: 330 GVLSACV 336
+L A V
Sbjct: 479 SILKAAV 485
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 92/191 (48%), Gaps = 3/191 (1%)
Query: 156 EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKK 215
E +S I +SK FE A KVF + + WN IIAG ++ D+F +
Sbjct: 7 EVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCN 66
Query: 216 CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRM 275
+PD T SV +AC SL +L V V + ++ D + S++D+Y KCG M
Sbjct: 67 GFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE---DVFVCTSIVDLYAKCGHM 123
Query: 276 DLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC 335
A +VF I P+V SWT M+ GY + A AL+ F MR SG+ N T V+SAC
Sbjct: 124 AEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISAC 183
Query: 336 VHGGKVQEGKH 346
V E
Sbjct: 184 GRPSMVCEASQ 194
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 13/148 (8%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+SLID + K R + AYKVF + NV W ++I G N D FH M +
Sbjct: 11 SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70
Query: 323 PNHVTFVGVLSAC-----VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
P+ T+ VL+AC + GKV + + ++V+ +VDL + G +
Sbjct: 71 PDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDVFVCTS-------IVDLYAKCGHM 123
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEK 405
EAR + + +VV W ++ K
Sbjct: 124 AEAREVFSRIS-NPSVVSWTVMLSGYTK 150
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 205/366 (56%), Gaps = 5/366 (1%)
Query: 103 KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN-EFCESG 161
++A+ ++ M GV P T +++A + +L +G Q H ++ G S E+
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGIS 670
Query: 162 FISLYSKAGDFEKARKVFDE-NPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEP 220
+ LY + +A +F E + + + W +++G SQ+G +EA+ + ++ G P
Sbjct: 671 LLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALP 730
Query: 221 DDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYK 280
D T V+V C L L +H +F + D L N+LIDMY KCG M + +
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLA--HDLDELTSNTLIDMYAKCGDMKSSSQ 788
Query: 281 VFWEIDQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF E+ + NV SW S+I GYA NG A +AL F MR+S I P+ +TF+GVL+AC H G
Sbjct: 789 VFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAG 848
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
KV +G+ FEMM Y IE R H CMVDLLGR G L+EA +E +K + +W L
Sbjct: 849 KVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSL 908
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+GAC G+ GE A+ L ELEP + AYV+LSNIYAS+G WEE +R M+ R +
Sbjct: 909 LGACRIHGDDMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVK 968
Query: 460 KIPAYS 465
K+P YS
Sbjct: 969 KVPGYS 974
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC L QI+ H+ + WN II Y + E +A D+++ M+ G++
Sbjct: 474 AKCGALEDARQIFEHMCDRDNVS-------WNTIIGGYVQDENESEAFDLFMRMNSCGIV 526
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D L LKA + L G+Q+H L+V+ GL+ S I +YSK G E ARKV
Sbjct: 527 SDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKV 586
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F PE + S NA+IAG SQ+ +EA+ +F + G P ++T ++ AC L
Sbjct: 587 FSSMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESL 645
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP-NVSSWTSMI 297
L Q H + + + + L + SL+ +Y RM A +F E+ P ++ WT M+
Sbjct: 646 TLGTQFHGQIIKWGFSSEGEYLGI-SLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMM 704
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
G++ NG EAL + MR G P+ TFV VL C ++EG+ ++ ++
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G ++ + + + M ++NVV W L+ K G
Sbjct: 765 LDELTS-NTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNG 813
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 7/302 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + + A++ ++ M ++ V TL VL A + L++G +H+ A+
Sbjct: 295 WNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI 354
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LGL SN + S +S+YSK E A KVF+ ER WNA+I G + +G + + ++
Sbjct: 355 KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVME 414
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +K G+ DD T S+ S C DLE+ Q H + +K K + + N+L+DM
Sbjct: 415 LFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSII--IKKKLTKNLFVGNALVDM 472
Query: 269 YGKCGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
Y KCG ++ A ++F + D+ NV SW ++I GY + +EA D F M GI +
Sbjct: 473 YAKCGALEDARQIFEHMCDRDNV-SWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGAC 531
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEG 386
L AC + + +GK + +V R H G ++D+ + G++E+AR +
Sbjct: 532 LASTLKACTNVHGLYQGKQVHCL--SVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSS 589
Query: 387 MP 388
MP
Sbjct: 590 MP 591
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 165/380 (43%), Gaps = 70/380 (18%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKAS-------------CQLF 135
WN+++ +Y+ + P K L ++ + + P+ +T IVL S C +
Sbjct: 128 WNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMI 187
Query: 136 ALEIGRQ---------LHSLAVRLG---------LESNEFCESGFISLYSKAG------- 170
+ + R +++ RLG ++ N C + S Y KAG
Sbjct: 188 KMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVI 247
Query: 171 ----------------------------DFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+ AR +F E P + +WN +I+G + G
Sbjct: 248 VFERMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGC 307
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
AI+ F+ ++K + T+ SV SA G + +L+L L VH +K S+ +
Sbjct: 308 EIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA--IKLGLASNIYVG 365
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
+SL+ MY KC +M+ A KVF +++ N W +MI GYA NG +++ ++ F M+ SG
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
+ TF +LS C ++ G F ++ + F +VD+ + G LE+AR
Sbjct: 426 IDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVG-NALVDMYAKCGALEDARQ 484
Query: 383 MVEGMPMKANVVIWGCLMGA 402
+ E M + NV W ++G
Sbjct: 485 IFEHMCDRDNVS-WNTIIGG 503
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 119/241 (49%), Gaps = 8/241 (3%)
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII 194
AL IG+ +HS ++ LG++S + + LY+K A K F+ + E+ + +WN+++
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSML 132
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
+ S G+ + + F+ L + P+ T V S ++E Q+H +K
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIH--CSMIKMG 190
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
+ ++ +L+DMY KC R+ A +VF I PN WT + GY GL EA+ F
Sbjct: 191 LERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFE 250
Query: 315 YMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRA 374
MR G RP+H+ FV V++ + GK+++ + F M + P + M+ G+
Sbjct: 251 RMRGEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKR 305
Query: 375 G 375
G
Sbjct: 306 G 306
>gi|357152230|ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Brachypodium distachyon]
Length = 468
Score = 258 bits (658), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 212/385 (55%), Gaps = 7/385 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAG---VLPDCYTLPIVLKASCQLFALEIGRQ 142
+F N +R P A + R+G P +T P +LKAS +L AL + +Q
Sbjct: 78 SFMLNTTLRALASSPDPASAFPFFSLHRRSGSSSYSPGRHTFPFLLKASARL-ALPVSQQ 136
Query: 143 LHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+H+L V+ GL + + +G + YS AG ARKVFD PER + +++G + +G
Sbjct: 137 IHALVVKHGLHLDTYVANGLVRAYSVAGLIGVARKVFDGLPERSTVVYTTMVSGYTLNGC 196
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACG--SLGDLELALQVHKYVFQVKSKQKSDTL 260
++A+ F + GFEP DV + SV SAC G L + +VH + + +
Sbjct: 197 YEDAMGAFGEMINEGFEPGDVVLASVLSACARSESGGLVIGRRVHNIIEMRGVEAPVGVI 256
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ +L+DMY K ++ A VF + + ++W ++I G A +G AL F M + G
Sbjct: 257 LSTALVDMYAKNAAIEEAVTVFKGMPERRTATWNALISGLAHHGHGKYALVMFQQMLQEG 316
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+ PN TFVGVLSA G + E + F MK+ + + P HYGCMVDLLGR+GLL EA
Sbjct: 317 VPPNATTFVGVLSAYCLSGMIDEARKAFRSMKD-FGLTPSIQHYGCMVDLLGRSGLLVEA 375
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
M+ GM +A+ +IWG L+ AC GN+ + A + +L+P + G YVVLSNIYA
Sbjct: 376 EEMIRGMTCEADTMIWGALLTACRNHGNIDIALRTALEILKLDPENHGVYVVLSNIYADA 435
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G W++V+R+R VMK L+KIP S
Sbjct: 436 GRWQDVDRLRKVMKGALLSKIPGSS 460
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 189/290 (65%), Gaps = 4/290 (1%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y+K G E A +F+ P + + SW+A+IAG ++ + EA+++F +++ G +PD++TM
Sbjct: 86 YAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITM 145
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML-NSLIDMYGKCGRMDLAYKVFWE 284
+SV SAC ++G LE A +H +V ++ L + N+LIDM+ KCG + LA VF
Sbjct: 146 LSVISACANVGALEKARCIHSFV---ENHSMCKILPIGNALIDMFSKCGSLTLALDVFNA 202
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
+ Q NV +WTS+I A +G AL F M+ GI+PN VTF+G+L AC H G V+EG
Sbjct: 203 MPQKNVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEG 262
Query: 345 KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
+ F++M Y+IEP HYGCMVDLLGRA LL +A +++ M ++ NVVIWG L+ AC
Sbjct: 263 RLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACR 322
Query: 405 KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMK 454
G++++G + AK + EL+P GA V+LSNIYA G W +V+ +R VM+
Sbjct: 323 MHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWNDVKEVRGVME 372
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 20/246 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W+ +I Y P +AL+++ M R+GV PD T+ V+ A + ALE R +HS
Sbjct: 110 WSAMIAGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSF-- 167
Query: 149 RLGLESNEFCE-----SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+E++ C+ + I ++SK G A VF+ P++ + +W +II + G
Sbjct: 168 ---VENHSMCKILPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHGDG 224
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM-- 261
+ A+ +F +K G +P+ VT + + AC G +E + +F++ +Q M
Sbjct: 225 RSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEG----RLLFKIMVQQYRIEPMHE 280
Query: 262 -LNSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++D+ G+ + A + + +PNV W S++ +G + L F +
Sbjct: 281 HYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHG--DLELGTFAAKKIL 338
Query: 320 GIRPNH 325
+ PNH
Sbjct: 339 ELDPNH 344
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 213 LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC 272
+K+ PD V + +V S C +L +H Y+ S D + +L++MY C
Sbjct: 1 MKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLV--SDTLIDAQVSCALMNMYASC 58
Query: 273 -------------------------------GRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
G++++A+ +F + +V SW++MI GYA
Sbjct: 59 ADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYA 118
Query: 302 ANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEP 359
+ EAL+ FH M+ SG++P+ +T + V+SAC + G +++ + H F ++ +I P
Sbjct: 119 ESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILP 178
Query: 360 RFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
++D+ + G L A + MP K NVV W ++ A G+
Sbjct: 179 IG---NALIDMFSKCGSLTLALDVFNAMPQK-NVVTWTSIITASAMHGD 223
>gi|414887968|tpg|DAA63982.1| TPA: hypothetical protein ZEAMMB73_972364 [Zea mays]
Length = 700
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 219/386 (56%), Gaps = 4/386 (1%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTLPIVLKASCQLFALEIG 140
S+ WN++++ Y R + + M G V P+ TL +VL A L +G
Sbjct: 179 SHRDVVSWNSMVKAYERAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLG 238
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R + G+E + S + +Y K G+ +AR+VFD + + +WNA+I G +Q+
Sbjct: 239 RWVEEWVRSAGMEVDSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQN 298
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G + EAI +F +++ G PD +T+V V S+C ++G L+L +++ Y ++ ++
Sbjct: 299 GMSNEAIALFHSMREAGLCPDKITLVGVLSSCAAVGALKLGVELDTYA--MRRGLYNNVY 356
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ES 319
+ +L+DMY KCG ++ A VF ++ N +SW ++I G A NG +A+ F MR E
Sbjct: 357 VGTALVDMYAKCGDLEKATHVFGKMPFKNEASWNALICGLAFNGRGYDAIQQFELMRDEK 416
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
G++P+ +TF+GVLSACVH G ++ G+ F + V++I PR HY C+VDLL RAG LEE
Sbjct: 417 GLQPDDITFIGVLSACVHAGLLEYGRQLFNSLTPVFKIIPRIEHYSCIVDLLARAGHLEE 476
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
A +E MP K + V+ G L+ AC K N ++GE V + +LEP + YVV S IYA+
Sbjct: 477 AWDFIEEMPGKVDAVMLGALLAACRKCKNTEVGERVINRIMKLEPSNSWNYVVSSKIYAT 536
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYS 465
+E R+ +M+ R + K P S
Sbjct: 537 SDKMDESARMIGLMRERGVNKTPGCS 562
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 172/326 (52%), Gaps = 14/326 (4%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL--PDCYTLPIVLKASCQLFALE 138
H AF +N IRL+ P +L +++ M RA V PD YTLP +L A+ + A
Sbjct: 76 HPAPTAFTYNVTIRLFAS-SRPDTSLRLFLSMLRAEVRVRPDAYTLPFLLLAAARCPAPA 134
Query: 139 IGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+ R H+L ++GL ++ I++YS D AR+VFD R + SWN+++
Sbjct: 135 LARSAHALLEKIGLGDHDHTVHSLITMYSCLDDHLAARRVFDGISHRDVVSWNSMVKAYE 194
Query: 199 QDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ G E M + G P+ VT+ V +AC G+L L V ++V + +
Sbjct: 195 RAGMVAEVEGMLRSMVTEGAVAPNGVTLAVVLTACRDAGNLVLGRWVEEWVRS--AGMEV 252
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D+L+ ++L+ MY KCG M A +VF I +V +W +MI GYA NG++NEA+ FH MR
Sbjct: 253 DSLIGSALVGMYEKCGEMAEARRVFDGIRHKDVVAWNAMITGYAQNGMSNEAIALFHSMR 312
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRA 374
E+G+ P+ +T VGVLS+C G ++ G + M + +Y + G +VD+ +
Sbjct: 313 EAGLCPDKITLVGVLSSCAAVGALKLGVELDTYAMRRGLYN----NVYVGTALVDMYAKC 368
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLM 400
G LE+A + MP K N W L+
Sbjct: 369 GDLEKATHVFGKMPFK-NEASWNALI 393
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 221/443 (49%), Gaps = 69/443 (15%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAG-------VLPDCYTLPIVLKASCQLFALEI 139
F +N +IR +AP+ A+ IY M+R + PD T P VL+A + A E
Sbjct: 74 FMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGET 133
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G Q+H+ V+ G ES+ F + I +++ GD A +FD +W+A+I+G ++
Sbjct: 134 GAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFAR 193
Query: 200 DGR---AKEAID-------------------------------------------MFIGL 213
G A+E D M G
Sbjct: 194 RGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGY 253
Query: 214 KKCG--------FE--------PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+CG FE PD VTM+S+ SAC GDL+ ++H ++ S+
Sbjct: 254 VRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGP 313
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
T + N+LIDMY KCG M A +VFW + NVS+W S+I G A +G A E++ F M
Sbjct: 314 TTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKML 373
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+ ++P+ +TFV VL+AC HGG V +G +F +M+ Y+IEP HYGCMVD+L R GLL
Sbjct: 374 QGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLL 433
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+EA + M ++ N VIW L+GAC G +++ E + L + + G +V+LSNIY
Sbjct: 434 KEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIY 493
Query: 438 ASRGLWEEVERIRAVMKHRNLAK 460
AS G W E +R +M + K
Sbjct: 494 ASVGEWPGSENMRKLMDDSGVNK 516
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 258 bits (658), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/410 (34%), Positives = 228/410 (55%), Gaps = 11/410 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+KC N+ + I+ + + ++ W ++ Y + AL + M V
Sbjct: 270 AKCGNMDEAQMIFYEMDKRDVVS-------WTTMMNGYILNGDARSALLLCQMMQFESVK 322
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
P+ TL VL A L++L+ GR LH A+R LES E+ I +Y+K + + +V
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRV 382
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + +++ WNAII+G +G +++AI++F + +P+D T+ S+ A L DL
Sbjct: 383 FSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN--VSSWTSM 296
+ A +H Y+ ++S S + LID+Y KCG ++ A+ +F I + + + +W+++
Sbjct: 443 QQARNMHGYL--IRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAI 500
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY +G A+ F M +SG++PN +TF +L AC H G V EG F+ M Q
Sbjct: 501 IAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQ 560
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ R HY C++DLLGRAG LEEA ++ M + N +WG L+G+C NV++GE A
Sbjct: 561 MSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAA 620
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
K L ELEP + G YV+L+NIY++ G W + E +R +M + L K PA+SL
Sbjct: 621 KWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSL 670
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 150/260 (57%), Gaps = 3/260 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +IR+YT AL +++ M +G PD YT P V+KA E+G +H+
Sbjct: 88 FSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHA 147
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V G +S+ F ++ +++Y G+ E AR+VFD ER L SWN +I G ++G KE
Sbjct: 148 RTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKE 207
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ +F + G EPD T+VSV C L +LE+ +VH V +VK+ + D + NSL
Sbjct: 208 ALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALV-EVKNLGE-DISVWNSL 265
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMY KCG MD A +F+E+D+ +V SWT+M+ GY NG A AL M+ ++PN
Sbjct: 266 LDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNF 325
Query: 326 VTFVGVLSACVHGGKVQEGK 345
VT VLSAC ++ G+
Sbjct: 326 VTLASVLSACASLYSLKHGR 345
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 163/315 (51%), Gaps = 4/315 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL ++ +M G+ PDC T+ VL L LE+GR++H+L
Sbjct: 192 WNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVE 251
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
L + + + +Y+K G+ ++A+ +F E +R + SW ++ G +G A+ A+
Sbjct: 252 VKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALL 311
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ ++ +P+ VT+ SV SAC SL L+ +H + ++ K +S+ ++ +LIDM
Sbjct: 312 LCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWA--IRQKLESEVIVETALIDM 369
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++L+++VF + + + W ++I G NGL+ +A++ F M + PN T
Sbjct: 370 YAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATL 429
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L A +Q+ ++ + + R ++D+ + G LE A + G+P
Sbjct: 430 NSLLPAYAFLTDLQQARNMHGYLIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIP 488
Query: 389 MK-ANVVIWGCLMGA 402
K +++ W ++
Sbjct: 489 KKDKDIITWSAIIAG 503
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 8/266 (3%)
Query: 141 RQLHSLAVRLGLESNEFCE---SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGL 197
+Q+H+ + LGL S+ + S + Y+ G ARK+FDE L SWNA+I
Sbjct: 38 KQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMY 97
Query: 198 SQDGRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+ G + +A+ +F+ + G PD+ T V ACG E+ +H V S
Sbjct: 98 TNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHART--VMSGFD 155
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
SD + NSL+ MY CG M++A +VF + + + SW +MI GY NG EAL F +M
Sbjct: 156 SDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWM 215
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
GI P+ T V VL C + +++ G+ +++ V + + + ++D+ + G
Sbjct: 216 IGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVE-VKNLGEDISVWNSLLDMYAKCGN 274
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGA 402
++EA+ + M K +VV W +M
Sbjct: 275 MDEAQMIFYEMD-KRDVVSWTTMMNG 299
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 213/395 (53%), Gaps = 17/395 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN +I R + AL++ M AG + T I L + L L +G+Q+H+
Sbjct: 485 AASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHT 544
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER---------------KLGSW 190
+++G+ + F + I +Y K G+ EKA +F P+ + SW
Sbjct: 545 QVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSW 604
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
+++++G Q+GR ++A+ F + E D T+ SV SAC S G LEL QVH Y+ +
Sbjct: 605 SSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK 664
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
+ D + +S+IDMY KCG ++ A+ +F + NV WTSMI G A +G EA+
Sbjct: 665 IG--HGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAV 722
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
F M GI PN V+FVGVL+AC H G ++EG +F +M+ VY I P H+ CMVDL
Sbjct: 723 RLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDL 782
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAY 430
GRAG L E + + + +W + +C N++MG WV K L ELEP+ G Y
Sbjct: 783 YGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPY 842
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ S+I A+ WEE +IR++M+ R + K P+ S
Sbjct: 843 ILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQS 877
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 167/397 (42%), Gaps = 58/397 (14%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+K NL Q ++++ I +T + F W +I + R+ L ++ M GV
Sbjct: 332 AKSQNLEQAHKMFEEIPQTDV-------FSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 119 PDCYTLPIVLKA-SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA-------- 169
P+ +TL IVLK+ S + IG+ +H +R GL+ + + + Y K
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 170 -----------------------GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
GD +K+ +F + P + SWN +I GL ++G + A
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++ + G + +T SL L L Q+H V +V D + NSLI
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLD--DGFVRNSLI 562
Query: 267 DMYGKCGRMDLAYKVFWEIDQPN---------------VSSWTSMIVGYAANGLANEALD 311
DMY KCG M+ A +F + Q + SW+SM+ GY NG +AL
Sbjct: 563 DMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALK 622
Query: 312 CFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
F +M S + + T V+SAC G ++ G+ ++ + F ++D+
Sbjct: 623 TFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG-SSIIDMY 681
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ G L +A ++ NVV+W ++ C G
Sbjct: 682 VKCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQ 717
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 121/265 (45%), Gaps = 35/265 (13%)
Query: 162 FISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
++LY+K+ + E+A K+F+E P+ + SW +I+G ++ G + + + +F ++ G P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386
Query: 222 DVTMVSVTSACGS-LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKC-------- 272
T+ V +C S + D + +H ++ +++ D ++ NS++D Y KC
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWI--LRNGLDLDAVLNNSILDYYVKCRCFGYAEK 444
Query: 273 -----------------------GRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
G M + +F ++ + +SW +MI G NG A
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD 369
L+ + M +G N +TF L + GK + V ++ F ++D
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVR-NSLID 563
Query: 370 LLGRAGLLEEARAMVEGMPMKANVV 394
+ + G +E+A + + +P +++++
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESSMM 588
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N L+++Y K ++ A+K+F EI Q +V SWT +I G+A GL+ + L F M++ G+
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVC 384
Query: 323 PNHVTFVGVLSAC---VHGGKVQEGKH 346
PN T VL +C V+ ++ +G H
Sbjct: 385 PNQFTLSIVLKSCSSNVNDSRIGKGIH 411
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 221/407 (54%), Gaps = 10/407 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC NL Q + + W ++I Y R A+ ++ M GV
Sbjct: 700 SKCGNLNDAIQAFEKM-------GQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVS 752
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD Y++ VL A +L+ GR +H+ + + + + +Y+K G E+A V
Sbjct: 753 PDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLV 812
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F + P + + SWN +I G S++ EA+ +F ++K PD +TM + ACGSL L
Sbjct: 813 FSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQK-ESRPDGITMACLLPACGSLAAL 871
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
E+ +H + +++ S+ + N+LIDMY KCG + A +F I + ++ +WT MI
Sbjct: 872 EIGRGIHGCI--LRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMIS 929
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G +GL NEA+ F MR +GI+P+ +TF +L AC H G + EG FF M + +E
Sbjct: 930 GCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNME 989
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P+ HY CMVDLL R G L +A ++E MP+K + IWG L+ C +V++ E VA+H
Sbjct: 990 PKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEH 1049
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + G YV+L+NIYA WEEV+++R + R L K P S
Sbjct: 1050 VFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCS 1096
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 183/357 (51%), Gaps = 15/357 (4%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYI 110
AK+V +S C L + +I+ HI+ S + F WN ++ Y ++ ++++ ++
Sbjct: 490 AKLVFMYVS-CGALREGRRIFDHIL------SDNKVFLWNLMMSEYAKIGDYRESIYLFK 542
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
M + G+ + YT +LK L + +++H +LG S + I+ Y K+G
Sbjct: 543 KMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSG 602
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ + A K+FDE +R + SWN++I+G +G + A++ F+ + D T+V+ +
Sbjct: 603 EVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVA 662
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC ++G L L +H VK+ + + N+L+DMY KCG ++ A + F ++ Q V
Sbjct: 663 ACANVGSLSLGRALHGQ--GVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTV 720
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
SWTS+I Y GL ++A+ F+ M G+ P+ + VL AC G + +G+ H +
Sbjct: 721 VSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNY 780
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
N+ P ++D+ + G +EEA + +P+K ++V W ++G K
Sbjct: 781 IRKNNMALCLPV---SNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGGYSK 833
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN-PER 185
+L+ + L+ G+ +HS+ G+ + + +Y G + R++FD +
Sbjct: 457 ILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDN 516
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
K+ WN +++ ++ G +E+I +F ++K G + T + +LG + ++H
Sbjct: 517 KVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIH 576
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
V+++ S ++NSLI Y K G +D A+K+F E+ +V SW SMI G NG
Sbjct: 577 GCVYKLGF--GSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHY 364
++ AL+ F M + + T V ++AC + G + G+ + +K + E F +
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++D+ + G L +A E M K VV W L+ A
Sbjct: 695 --LLDMYSKCGNLNDAIQAFEKMGQKT-VVSWTSLIAA 729
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 217/378 (57%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y+ K A+D++ M G PD TL +L A L L GR L +A+
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + F S IS+Y K GD + AR+VF++ ++ +W A+I SQ+G++ EA
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD T+ +V SACGS+G LEL Q+ + ++ + + + L+DM
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH--NIYVATGLVDM 378
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCGR++ A +VF + N ++W +MI YA G A EAL F M + P+ +TF
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 435
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSACVH G V +G +F M +++ + P+ HY ++DLL RAG+L+EA +E P
Sbjct: 436 IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL-EPWSDGAYVVLSNIYASRGLWEEVE 447
K + ++ ++GAC K +V + E + L E+ E + G YV+ SN+ A +W+E
Sbjct: 496 GKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESA 555
Query: 448 RIRAVMKHRNLAKIPAYS 465
++RA+M+ R + K P S
Sbjct: 556 KMRALMRDRGVVKTPGCS 573
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 196/382 (51%), Gaps = 37/382 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHS------------------YSA----------AFHW 89
L KC ++ QL QI A ++ LHS YS+ + +
Sbjct: 44 LKKCISVNQLRQIQAQML----LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 90 NNIIR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR L + AL +Y M +G+ PD +T V A +L + +GR +HS
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 159
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE + I +Y+K G ARK+FDE ER SWN++I+G S+ G AK+A+D
Sbjct: 160 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ GFEPD+ T+VS+ AC LGDL + + + K T + + LI M
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE--MAITKKIGLSTFLGSKLISM 277
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D A +VF ++ + + +WT+MI Y+ NG ++EA F M ++G+ P+ T
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC G ++ GK E + ++ +VD+ G+ G +EEA + E MP
Sbjct: 338 STVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 389 MKANVVIWGCLMGACEKFGNVK 410
+K N W ++ A G+ K
Sbjct: 397 VK-NEATWNAMITAYAHQGHAK 417
>gi|225427070|ref|XP_002275784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g31920
[Vitis vinifera]
gi|297742017|emb|CBI33804.3| unnamed protein product [Vitis vinifera]
Length = 605
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 223/383 (58%), Gaps = 3/383 (0%)
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
+F +N ++R + + ++AL Y M+ GV PD +T P +LKA +L A+E G Q+H
Sbjct: 95 GSFQFNTMMRGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVH 154
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ ++LGLE++ F ++ IS+Y K G+ VF++ ER + SW+A+I + G
Sbjct: 155 AHILKLGLENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWS 214
Query: 205 EAIDMFIGLKKCGF-EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ + + + G+ ++ +VSV SAC LG L+L VH ++ +++ + ++
Sbjct: 215 DCLRLLGDMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGFL--LRNVSGLNVIVET 272
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
SLI+MY KCG + +F ++ + N S++ MI G A +G E L F M E G+ P
Sbjct: 273 SLIEMYLKCGSLYKGMCLFQKMAKKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP 332
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ + +VGVL+AC H G VQEG F MK + IEP HYGCMVDL+GRAG ++EA +
Sbjct: 333 DDIVYVGVLNACSHAGLVQEGLQCFNRMKLEHGIEPTIQHYGCMVDLMGRAGKIDEALEL 392
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MPM+ N V+W L+ A + N++ GE AK L +L+ YVVLSN+YA W
Sbjct: 393 IKSMPMEPNDVLWRSLLSASKVHNNLQAGEIAAKQLFKLDSQKASDYVVLSNMYAQAQRW 452
Query: 444 EEVERIRAVMKHRNLAKIPAYSL 466
E+V + R M + L++ P +SL
Sbjct: 453 EDVAKTRTNMFSKGLSQRPGFSL 475
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 157/316 (49%), Gaps = 14/316 (4%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISL--YSKAGDFEKARKVFDENPERKLGSWNAII 194
+E +Q H+ ++LGL + FC S ++ S G + A +F + E +N ++
Sbjct: 44 MEEFKQSHARILKLGLFGDSFCASNLVATCALSDWGSMDYACSIFRQMDELGSFQFNTMM 103
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
G +D +EA+ + + + G +PD+ T ++ AC L +E +QVH ++ +K
Sbjct: 104 RGHVKDMNTEEALITYKEMAERGVKPDNFTYPTLLKACARLPAVEEGMQVHAHI--LKLG 161
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH 314
++D + NSLI MYGKCG + + VF ++++ +V+SW+++I +A+ G+ ++ L
Sbjct: 162 LENDVFVQNSLISMYGKCGEIGVCCAVFEQMNERSVASWSALITAHASLGMWSDCLRLLG 221
Query: 315 YMRESGI-RPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLL 371
M G R V VLSAC H G + G+ H F +++NV + ++++
Sbjct: 222 DMSNEGYWRAEESILVSVLSACTHLGALDLGRSVHGF-LLRNVSGLNVIVE--TSLIEMY 278
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHL--QELEPWSDGA 429
+ G L + + + M K N + + ++ G + G + + Q LEP D
Sbjct: 279 LKCGSLYKGMCLFQKMA-KKNKLSYSVMISGLAMHGYGREGLRIFTEMLEQGLEP-DDIV 336
Query: 430 YVVLSNIYASRGLWEE 445
YV + N + GL +E
Sbjct: 337 YVGVLNACSHAGLVQE 352
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 217/378 (57%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y+ K A+D++ M G PD TL +L A L L GR L +A+
Sbjct: 197 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 256
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + F S IS+Y K GD + AR+VF++ ++ +W A+I SQ+G++ EA
Sbjct: 257 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 316
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD T+ +V SACGS+G LEL Q+ + ++ + + + L+DM
Sbjct: 317 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH--NIYVATGLVDM 374
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCGR++ A +VF + N ++W +MI YA G A EAL F M + P+ +TF
Sbjct: 375 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 431
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSACVH G V +G +F M +++ + P+ HY ++DLL RAG+L+EA +E P
Sbjct: 432 IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 491
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL-EPWSDGAYVVLSNIYASRGLWEEVE 447
K + ++ ++GAC K +V + E + L E+ E + G YV+ SN+ A +W+E
Sbjct: 492 GKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESA 551
Query: 448 RIRAVMKHRNLAKIPAYS 465
++RA+M+ R + K P S
Sbjct: 552 KMRALMRDRGVVKTPGCS 569
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 196/382 (51%), Gaps = 37/382 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHS------------------YSA----------AFHW 89
L KC ++ QL QI A ++ LHS YS+ + +
Sbjct: 40 LKKCISVNQLRQIQAQML----LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 95
Query: 90 NNIIR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR L + AL +Y M +G+ PD +T V A +L + +GR +HS
Sbjct: 96 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 155
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE + I +Y+K G ARK+FDE ER SWN++I+G S+ G AK+A+D
Sbjct: 156 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMD 215
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ GFEPD+ T+VS+ AC LGDL + + + K T + + LI M
Sbjct: 216 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE--MAITKKIGLSTFLGSKLISM 273
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D A +VF ++ + + +WT+MI Y+ NG ++EA F M ++G+ P+ T
Sbjct: 274 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 333
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC G ++ GK E + ++ +VD+ G+ G +EEA + E MP
Sbjct: 334 STVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 392
Query: 389 MKANVVIWGCLMGACEKFGNVK 410
+K N W ++ A G+ K
Sbjct: 393 VK-NEATWNAMITAYAHQGHAK 413
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/445 (33%), Positives = 223/445 (50%), Gaps = 70/445 (15%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +IR Y +AL I+ M PD YT P VLKA L L +G Q+H V
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164
Query: 149 RLGLESNEFCESGFISL-------------------------------YSKAGDFEKARK 177
++GL++N F + +++ Y+++G F+ A +
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224
Query: 178 V-------------------------------------FDENPERKLGSWNAIIAGLSQD 200
+ F+ ++ L SWN +IA +
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
EA+ +F+ +++CG +PD VT+ S+ ACG L L L ++HKY+ K + + L
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYI--EKGNLRPNLL 342
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ N+L+DMY KCG ++ A VF ++ +V SWTSM+ Y +G +A+ F M +SG
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P+ + FV VLSAC H G + +G+H+F MM Y I PR H+ CMVDL GRAG +EEA
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ ++ MPM+ N +WG L+ AC + +G A L +L P G YV+LSNIYA
Sbjct: 463 YSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKA 522
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYS 465
G+W++V +R MK + K+P S
Sbjct: 523 GMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 23/304 (7%)
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
YS G+ AR +FD + E+ + +N +I + EA+ +F + C F PD T
Sbjct: 81 YSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
V AC L +L + LQVH + VK ++ + N+L+ MYGKCG + A KV ++
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAI--VKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG--KVQE 343
+V SW SM+ GYA +G ++AL+ M + + T + + VQ
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQY 258
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEGMPMKANVVIWGCLM 400
+ FE M + + M+ + + EA ++ +E MK + V L+
Sbjct: 259 IHNMFERMT-----KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313
Query: 401 GACEKFGNVKMGEWVAKHLQE--LEPWSDGAYVVLSN----IYASRGLWEEVERIRAVMK 454
AC + +G + K++++ L P ++L N +YA G EE + M+
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRP-----NLLLENALLDMYAKCGCLEEARDVFDKMR 368
Query: 455 HRNL 458
R++
Sbjct: 369 LRDV 372
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 79/201 (39%), Gaps = 12/201 (5%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
D + L+ Y G +A +F + NV + MI Y N L EAL F M
Sbjct: 70 DPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVML 129
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
P+H TF VL AC ++ G + + V ++ +V + G+ G L
Sbjct: 130 SCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKV-GLDTNLFIGNALVAMYGKCGCL 188
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA-------- 429
EAR +++ MP + +VV W ++ + G + K + L D
Sbjct: 189 REARKVLDQMPYR-DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPV 247
Query: 430 --YVVLSNIYASRGLWEEVER 448
Y L N+ ++E + +
Sbjct: 248 VCYTSLENVQYIHNMFERMTK 268
>gi|76556518|emb|CAJ32535.1| pentatricopeptide repeat-containing protein [Hordeum vulgare subsp.
vulgare]
Length = 652
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 202/330 (61%), Gaps = 3/330 (0%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENP--ERKLGSWNAIIAGLSQ 199
QL +LA + GL S + IS+Y ++ AR+VFDE P R L SW A+++ +Q
Sbjct: 193 QLQALAAQSGLASRTTVANCLISVYGRSSP-TLARQVFDEMPLATRDLVSWTAVLSAHAQ 251
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G A +A++++ ++ G EPD +T+V V S+C L + L V +YV Q +++
Sbjct: 252 GGLAVDALELYRRMRGHGVEPDALTLVGVLSSCSHLAARSVGLDVDRYVRQRLPGFRANV 311
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ ++LI+ + +CG + A ++F E+ + ++ SWT++I GY +G + A++ F M
Sbjct: 312 QLCSALINFHARCGSLPQAQQLFDEMPRKSIVSWTALITGYGMHGHGDIAINFFQRMVSQ 371
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
GIRP++V+ V +LSAC H GK +EG +F M++ Y++ P HY CMVDLLGRAG LEE
Sbjct: 372 GIRPDNVSMVALLSACSHAGKYEEGCKYFFAMESTYKLRPTLEHYACMVDLLGRAGRLEE 431
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYAS 439
AR ++ MPM A+ +WG L+GAC+ NV+ GE KH+ LEP + G YV+++N+Y
Sbjct: 432 ARELISSMPMPADGSVWGALLGACKIHKNVEAGEEAFKHVIMLEPSNVGYYVLMANMYTD 491
Query: 440 RGLWEEVERIRAVMKHRNLAKIPAYSLATR 469
G + V R+RA+M+ R L K P + R
Sbjct: 492 SGQQDGVARVRAMMRERGLKKEPGRTQVVR 521
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 8/214 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS-LA 147
W ++ + + AL++Y M GV PD TL VL + L A +G + +
Sbjct: 242 WTAVLSAHAQGGLAVDALELYRRMRGHGVEPDALTLVGVLSSCSHLAARSVGLDVDRYVR 301
Query: 148 VRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
RL G +N S I+ +++ G +A+++FDE P + + SW A+I G G A
Sbjct: 302 QRLPGFRANVQLCSALINFHARCGSLPQAQQLFDEMPRKSIVSWTALITGYGMHGHGDIA 361
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN--S 264
I+ F + G PD+V+MV++ SAC G E + KY F ++S K + +
Sbjct: 362 INFFQRMVSQGIRPDNVSMVALLSACSHAGKYE---EGCKYFFAMESTYKLRPTLEHYAC 418
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQP-NVSSWTSMI 297
++D+ G+ GR++ A ++ + P + S W +++
Sbjct: 419 MVDLLGRAGRLEEARELISSMPMPADGSVWGALL 452
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 220/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +++ Y R+ + ++ M + G + V+ A+C+ L +GR + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+E + S + +Y K G+ +AR+VFD ++ + +WNA+I G +Q+G + EAI
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ G PD +T+ V SAC ++G LEL ++ Y + S+ + +L+D
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYA--SRRGLYSNVYVGTALVD 398
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG +D A +VF ++ NV+SW ++I G A NG +EA+ F MR E G++P+ +
Sbjct: 399 MYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V++GK +F + +QI P+ HY CMVDLL R+G LEEA +E
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++GE V + +LEP + YVV S IYAS ++
Sbjct: 519 IPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDS 578
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M+ R + K P S
Sbjct: 579 AKMRGLMRERGVNKTPGCS 597
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 175/324 (54%), Gaps = 12/324 (3%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
HS AF +N IR + P +L +++ M R+ + PD YTLP +L A+ + A +
Sbjct: 113 HSAPTAFSYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLA 171
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R H+L ++GL ++ I++YS D ARKVFD P R + SWNA++ +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRV 231
Query: 201 GRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G E MF + K G P+ VT+ V +AC GDL L V ++ + ++ + D+
Sbjct: 232 GMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWS--ARMEMDS 289
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L+ ++L+ MY KCG + A +VF I ++ +W +MI GYA NG++NEA+ FH MR +
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRAGL 376
G+RP+ +T GVLSAC G ++ G + + +Y + G +VD+ + G
Sbjct: 350 GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYS----NVYVGTALVDMYAKCGD 405
Query: 377 LEEARAMVEGMPMKANVVIWGCLM 400
L++A + MP K NV W L+
Sbjct: 406 LDKAIEVFRKMPCK-NVASWNALI 428
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 218/379 (57%), Gaps = 5/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+I+ Y+ +AL ++ M +G+ PD T+ +L A AL GR +HS V
Sbjct: 323 WNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLV 382
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LGL+ + + +S+Y++ D A VF E ++ + +WN+I+ +Q +E +
Sbjct: 383 KLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLK 442
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F L K D +++ +V SA LG E+ QVH Y F K+ D ++ N+LID
Sbjct: 443 LFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAF--KAGLVDDRMLSNTLIDT 500
Query: 269 YGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
Y KCG +D A ++F EI + +V SW+S+IVGYA G A EALD F MR GIRPNHV
Sbjct: 501 YAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHV 559
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVL+AC G V EG +++ +M+ Y I P H C+VDLL RAG L EA ++
Sbjct: 560 TFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQ 619
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP + ++++W L+ A + +++MG+ A+ + ++P AYV+L NIYA+ G W E
Sbjct: 620 MPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEF 679
Query: 447 ERIRAVMKHRNLAKIPAYS 465
R++ M+ + K P S
Sbjct: 680 ARLKKAMRTSGVKKSPGKS 698
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 180/367 (49%), Gaps = 10/367 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + + AL ++ M R+G D + L ++A +L + GRQ+H+ A+
Sbjct: 120 WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHAL 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ ++ +++YSK G + +F+ ++ L SW +IIAG +Q G EA+
Sbjct: 180 KSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQ 239
Query: 209 MFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G P++ S ACG++G E Q+H +K + D + SL D
Sbjct: 240 VFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHG--LSIKYRLDRDLYVGCSLSD 297
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY + +D A F+ I+ P++ SW S++ Y+ GL +EAL F MR+SG+RP+ +T
Sbjct: 298 MYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGIT 357
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
G+L ACV + G+ + + ++ + ++ + R L A + +
Sbjct: 358 VRGLLCACVGRDALYHGRLIHSYLVKL-GLDGDVSVCNSLLSMYARCSDLSSAMDVFHEI 416
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY---ASRGLWE 444
+VV W ++ AC + + + + L + EP D + L+N+ A G +E
Sbjct: 417 K-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLD--RISLNNVLSASAELGYFE 473
Query: 445 EVERIRA 451
V+++ A
Sbjct: 474 MVKQVHA 480
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 14/285 (4%)
Query: 127 VLKASCQLFALEIGRQLH-------SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
++ A +L +L GR++H S + L N + I++Y + + AR+VF
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQVF 109
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
DE P R SW ++IA Q+GRA +A+ +F + + G D + S AC LGD+
Sbjct: 110 DEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVG 169
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
QVH + +KS++ SD ++ N+L+ MY K G +D + +F I ++ SW S+I G
Sbjct: 170 TGRQVHAHA--LKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAG 227
Query: 300 YAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
+A G EAL F M E PN F AC G + G+ + Y+++
Sbjct: 228 FAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIK-YRLD 286
Query: 359 PRFAHYGC-MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
R + GC + D+ R L+ AR + ++V W ++ A
Sbjct: 287 -RDLYVGCSLSDMYARFKNLDSARVAFYRIE-APDLVSWNSIVNA 329
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 217/377 (57%), Gaps = 4/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + R ++AL ++ M + D YT P VL +C + + +H L +
Sbjct: 334 WNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVL--NCCVVGSINPKSVHGLII 391
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E+ + + + +Y+K GD + A VF++ E+ + SW +++ G +Q+ +E++
Sbjct: 392 KTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLK 451
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD + S+ SAC L LE QVH + +KS + + NSL+ M
Sbjct: 452 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVH--LDFIKSGLRWSQSVYNSLVAM 509
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D A +F + +V +WT++IVGYA NG +L + M SG RP+ +TF
Sbjct: 510 YAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 569
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G V EG+ +F+ M VY I+P HY CM+DL GR+G L+EA+ +++ M
Sbjct: 570 IGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD 629
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + +W L+ AC N+++ E A +L ELEP + YV+LSN+Y++ W +V +
Sbjct: 630 VKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAK 689
Query: 449 IRAVMKHRNLAKIPAYS 465
IR +MK + + K P S
Sbjct: 690 IRKLMKSKGIVKEPGCS 706
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 162/315 (51%), Gaps = 12/315 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + KA++ + +M GV + YT P +L A + A G Q+H V
Sbjct: 233 WTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIV 292
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G SN + +S + +Y+K GD + A+ + + + + SWN+++ G + G +EA+
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALR 352
Query: 209 MFIGLKKCGFEPDDVTMVSVTSAC--GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F + + DD T SV + C GS+ VH + +K+ ++ L+ N+L+
Sbjct: 353 LFKNMHGRNMKIDDYTFPSVLNCCVVGSIN----PKSVHGLI--IKTGFENYKLVSNALV 406
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY K G MD AY VF ++ + +V SWTS++ GYA N E+L F MR +G+ P+
Sbjct: 407 DMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQF 466
Query: 327 TFVGVLSACVHGGKVQEGKHF-FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
+LSAC ++ GK + +K+ + Y +V + + G L++A A+
Sbjct: 467 IVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDADAIFV 524
Query: 386 GMPMKANVVIWGCLM 400
M +K +V+ W ++
Sbjct: 525 SMQVK-DVITWTAII 538
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 150/316 (47%), Gaps = 26/316 (8%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y + +A D++ M G +TL VL+ L ++ G +H V+ G E N
Sbjct: 137 YCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGN 196
Query: 156 EFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL 213
F +G + +Y+K +A +F E + W A++ G +Q+G +A++ F +
Sbjct: 197 VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM 256
Query: 214 KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
G E + T ++ +AC S+ QVH ++ VKS S+ + ++L+DMY KCG
Sbjct: 257 HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFI--VKSGFGSNVYVQSALVDMYAKCG 314
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
+ A + ++ +V SW S++VG+ +GL EAL F M ++ + TF VL+
Sbjct: 315 DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLN 374
Query: 334 AC---------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
C VHG ++ G ++++ N +VD+ + G ++ A +
Sbjct: 375 CCVVGSINPKSVHGLIIKTGFENYKLVSNA------------LVDMYAKTGDMDCAYTVF 422
Query: 385 EGMPMKANVVIWGCLM 400
E M ++ +V+ W L+
Sbjct: 423 EKM-LEKDVISWTSLV 437
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 124/278 (44%), Gaps = 59/278 (21%)
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR------------------------ 202
SK+G ARK+FD+ P++ SWN +I+ GR
Sbjct: 76 SKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIIS 135
Query: 203 -------AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
EA D+F ++ G++ T+ SV C SLG ++ +H +V VK+
Sbjct: 136 GYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV--VKNGF 193
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVF--WEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ + ++ L+DMY KC + A +F E D+ N WT+M+ GYA NG +A++ F
Sbjct: 194 EGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFF 253
Query: 314 HYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMKNVYQIEPRFA 362
YM G+ N TF +L+AC VHG V+ G NVY
Sbjct: 254 RYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG-----FGSNVYV------ 302
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+VD+ + G L+ A+ M+E M +VV W LM
Sbjct: 303 -QSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLM 338
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 212/381 (55%), Gaps = 4/381 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y ++ + L+ + M+ V+P +T+ VL + L GR +H A+
Sbjct: 205 WNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAM 264
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G +S + I +Y K E A ++F+ E+ + SWN+I++ Q G +
Sbjct: 265 KMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLR 324
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLMLNS 264
+ + G +PD VT+ +V AC L L ++H Y+ K D L+ N+
Sbjct: 325 LLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNA 384
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
+IDMY KCG M A+ VF + +V+SW MI+GY +G NEAL+ F M E ++P+
Sbjct: 385 VIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPD 444
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTFVGVLSAC H G V +G++F MK+ Y + P HY C++D+LGRAG L+EA +
Sbjct: 445 EVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELA 504
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
MP++AN V+W L+ AC + + E A+ + ELEP G+YV++SN+Y + G +E
Sbjct: 505 LTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYE 564
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
EV +R M+ +N+ K P S
Sbjct: 565 EVLEVRHTMRQQNVRKTPGCS 585
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N II + P++ + Y M GV+PD +T P +KA L LEI +++H L
Sbjct: 105 FAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC--LDVLEI-KKIHGL 161
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+ GLE + F S ++ Y K G E A+ F+E P R + WNA++ G +Q G+ +
Sbjct: 162 LFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMV 221
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F + P T+ V S +GDL +H F +K S + NSLI
Sbjct: 222 LETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHG--FAMKMGYDSGVAVSNSLI 279
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKC ++ A ++F + + ++ SW S++ + G + L M +GI+P+ V
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM------KNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
T VL AC H + G+ M K+ I+ ++D+ + G + +A
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLK-NAVIDMYAKCGSMRDA 398
Query: 381 RAMVEGMPMKANVVIWGCLM 400
+ E M K +V W ++
Sbjct: 399 HLVFERMSNK-DVASWNIMI 417
>gi|413932592|gb|AFW67143.1| hypothetical protein ZEAMMB73_912965 [Zea mays]
Length = 619
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 220/386 (56%), Gaps = 9/386 (2%)
Query: 86 AFHWNNIIRLYTRLEAPK---KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
AF N +IR + P +A + M R+ LP+ +T P +LKA C F +G Q
Sbjct: 108 AFLANTLIRAHAASPLPSARLRAASFFPLMLRSATLPNKFTFPFLLKA-CAAFP-GVGVQ 165
Query: 143 LHSLAVRLGLESNEFCESGFISLYS-KAGDF-EKARKVFDENPERKLGSWNAIIAGLSQD 200
H+ A++ G ++++ + I +YS G+F AR VFD + +W+A+I G +
Sbjct: 166 AHAAALKFGFTTDQYVSNTLIHMYSCFGGEFLGDARNVFDRMAKSSAVTWSAMIGGYVRS 225
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
G + +A+ +F ++ G PD+VTM+ V +A LG LELA V ++V + + KS TL
Sbjct: 226 GLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWVGRFV-EKEGIGKSVTL 284
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
N+LID KCG +D A VF + + + SWTS+I A G EA+ F M+ +G
Sbjct: 285 -CNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRGKEAVAVFEEMKTAG 343
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
+RP+ V F+GVL+AC H G V EG +FE M+ Y I+P+ HYGCMVD+ GRAG++E A
Sbjct: 344 VRPDDVAFIGVLTACSHAGMVDEGYGYFESMRMAYGIDPKIEHYGCMVDMFGRAGMVERA 403
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
V MPMK N +IW L+ AC G +++GE + ++L P + YV+LSN+YA
Sbjct: 404 MEFVHKMPMKPNPIIWRTLVAACRAHGRLELGETITRNLLNEYPAHEANYVMLSNVYALT 463
Query: 441 GLWEEVERIRAVMKHRNLAKIPAYSL 466
W+E IR M R + K+P SL
Sbjct: 464 RRWKEKSEIRREMSKRGIKKVPGCSL 489
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 35/272 (12%)
Query: 84 SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQL 143
S+A W+ +I Y R A+ ++ M +GV PD T+ VL A+ L ALE+ R +
Sbjct: 210 SSAVTWSAMIGGYVRSGLSSDAVGLFREMQASGVRPDEVTMIGVLAAAADLGALELARWV 269
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+ G+ + + I +K GD + A VF ER + SW ++I L+ +GR
Sbjct: 270 GRFVEKEGIGKSVTLCNALIDALAKCGDLDGAMAVFQGMKERTIVSWTSVIDALAMEGRG 329
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
KEA+ +F +K G PDDV + V +AC G ++
Sbjct: 330 KEAVAVFEEMKTAGVRPDDVAFIGVLTACSHAGMVD------------------------ 365
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+ YG M +AY + P + + M+ + G+ A++ H M ++P
Sbjct: 366 ---EGYGYFESMRMAYGI-----DPKIEHYGCMVDMFGRAGMVERAMEFVHKM---PMKP 414
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
N + + +++AC G+++ G+ + N Y
Sbjct: 415 NPIIWRTLVAACRAHGRLELGETITRNLLNEY 446
>gi|225435652|ref|XP_002283361.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36730
[Vitis vinifera]
Length = 461
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 215/380 (56%), Gaps = 3/380 (0%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN+IIR YT+ P +A+ ++ M R G+ PD +T P V+KA + + G +HS+
Sbjct: 66 FAWNSIIRAYTKSSVPIEAVKLFSQMQRVGLKPDNFTYPFVVKACGRSLVVGAGGAMHSI 125
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G +S+ + + + +Y+ AR+VF+E R + SW+++IAG +A
Sbjct: 126 IVKAGFDSDRYVGNTLLRMYANLNAVGLARRVFNEMTVRDVVSWSSMIAGYVACNCQADA 185
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + +P+ VT+VS+ SAC L ++ + +H Y+ + + D + +++
Sbjct: 186 LMVFRHMMLANEKPNSVTLVSLLSACTRLLNIGVGESIHSYI--IVNCIGLDVALGTAIL 243
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
+MY KCG ++ A KVF + + N+ SWT MI G A + +A+ F M ++G++P+ +
Sbjct: 244 EMYSKCGHIEKALKVFNSLTEKNLQSWTIMISGLADHSHGEDAISLFTQMEQTGLQPDSM 303
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+F +LSAC H G V EG+ FF M +Y I P HYGCMVD+ RAG++EEA +++
Sbjct: 304 SFSEILSACSHLGLVDEGQTFFSQMVKIYNIRPTMEHYGCMVDMFARAGMIEEAYEIIKN 363
Query: 387 MPMKANVVIWGCLMGACEKFGNV-KMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ N VI +GAC G V E + + L E+EP YV+ S + + G W E
Sbjct: 364 MPMEPNSVILRSFIGACRNDGRVFGFDENLRRLLLEIEPDLGANYVLASGVSSLSGCWNE 423
Query: 446 VERIRAVMKHRNLAKIPAYS 465
+R MK + L K+P +S
Sbjct: 424 AADLRVSMKEKGLKKVPGWS 443
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 257 bits (657), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 228/417 (54%), Gaps = 12/417 (2%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P + T SK ++++ +++ ++R + WN++I Y ++AL ++
Sbjct: 153 PMNCLITGYSKSGDVVKARRLFDGMVR-------RTSASWNSMIACYAHGGEYQEALRLF 205
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M G P+ T+ + + LE G+ SL L+ N + + +Y K
Sbjct: 206 RRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKC 264
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
++AR+ FD +R + +W+ +IAG +Q+GR E++++F +K +P++VT+V V
Sbjct: 265 QAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVL 324
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQP 288
SAC LG EL Q+ +V +S+ T L S LIDMY KCG + A VF ++
Sbjct: 325 SACAQLGSDELGGQIGSHV---ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
V +W SM+ G A NG A +A+ + M E ++PN +TFV +L+AC H G V +G FF
Sbjct: 382 VVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFF 441
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ MK ++ + P+ H C+VDLL ++G L EA + M ++ N VIW L+ AC +
Sbjct: 442 KEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHAD 501
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V++ + A L LEP + YV+LSNIYA GLW +V IR +M+ +N+ K+ AYS
Sbjct: 502 VELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYS 558
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 44/345 (12%)
Query: 91 NIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+I +RL + ++ LD + + R G V P C +P+V+K+ L A G+Q+H A+
Sbjct: 55 TLISALSRLCSHQELLDAFSSLHRRGSDVPPGC--VPLVVKSCAILAASRQGKQVHCHAI 112
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENP------------------------- 183
GL + F ++ + Y+K GD + A KVFDE P
Sbjct: 113 VRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARR 172
Query: 184 ------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
R SWN++IA + G +EA+ +F + G P+ +T+ ++ S C GD
Sbjct: 173 LFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGD 232
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE K+ + ++Q +++++ L++MY KC +D A + F + Q +V +W++M
Sbjct: 233 LETG----KWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRDVVAWSTM 288
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA NG +E+L+ F M+ + +PN VT VGVLSAC G + G +++ Q
Sbjct: 289 IAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVES--Q 346
Query: 357 IEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
P ++ G ++D+ + G + AR++ M K V+ W +M
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMM 390
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 105/274 (38%), Gaps = 36/274 (13%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
L S A AR +FD P +I+ LS+ +E +D F L + G +
Sbjct: 28 LLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGC 87
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ V +C L QVH + + D + +L+D Y K G MD A KVF E
Sbjct: 88 VPLVVKSCAILAASRQGKQVHCHA--IVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDE 145
Query: 285 --IDQP-----------------------------NVSSWTSMIVGYAANGLANEALDCF 313
+ P +SW SMI YA G EAL F
Sbjct: 146 MPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M G RPN +T + S C G ++ GK ++ ++ H M ++ +
Sbjct: 206 RRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAE-QDLQNMIVHTALM-EMYVK 263
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++EAR + M + +VV W ++ + G
Sbjct: 264 CQAIDEARREFDRMQQR-DVVAWSTMIAGYAQNG 296
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 226/412 (54%), Gaps = 54/412 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA------------ 136
WN + Y + E PK+AL+++ M G+ PD T +V +SC
Sbjct: 226 WNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW-VVTISSCSSIGDPTLADSILRMI 284
Query: 137 ------------------------LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
LEI R + LG + N + IS Y++ G
Sbjct: 285 DQKHIVLNSFVKTALLDMHAKFGNLEIARNIFD---ELGSQRNAVTWNIMISAYTRVGKL 341
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSA 231
AR++FD P+R + SWN++IAG +Q+G + +I++F + C +PD+VT+ SV SA
Sbjct: 342 SLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSA 401
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLML---NSLIDMYGKCGRMDLAYKVFWEIDQP 288
CG +G L+L+ V V ++K+ L + NSLI MY KCG + A+++F +
Sbjct: 402 CGHIGALKLSYWVLDIV-----REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR 456
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V S+ ++I G+AANG EA+ M E GI P+HVT++GVL+AC H G + EGK+ F
Sbjct: 457 DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVF 516
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ ++ P HY CMVDLLGRAG L+EA+ +++ MPMK + ++G L+ A
Sbjct: 517 KSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
V +GE A L ELEP + G YV+LSNIYAS G WE+V+R+R +MK L K
Sbjct: 572 VGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKK 623
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 35/283 (12%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ ++ Y+K GD E AR+ FDE PER + SWNA+ + +Q KEA+++F + + G
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 220 PDDVTMVSVTSACGSLGDLELA-------------------------------LQVHKYV 248
PDD T V S+C S+GD LA L++ + +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
F Q+ + + N +I Y + G++ LA ++F + + +V SW SMI GYA NG +
Sbjct: 316 FDELGSQR-NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374
Query: 309 ALDCFHYMRES-GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+++ F M I+P+ VT VLSAC H G ++ ++++ I+ + + +
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE-KNIKLGISGFNSL 433
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + + G + +A + + M + +VV + L+ G+ K
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGK 475
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 59 SKCTNLLQLNQIYAHIIRTHM----------------LHSYSA-------------AFHW 89
SK +N+ QL Q + H++ + LH++ A A +
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVY 68
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
+ +++ Y+R+ A + + ++ + P + ++K A + G H+ ++
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNMFHAYVLK 123
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LG + F + + +Y+K G + AR +F++ ER L WN++I+G + G EA+ +
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVL 183
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + + +T S+ + +GDLE
Sbjct: 184 FNMMPA----RNIITWTSMVTGYAKMGDLE------------------------------ 209
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
A + F E+ + +V SW +M YA EAL+ FH M E GI P+ T+V
Sbjct: 210 -------SARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
+S+C G M+ + + F ++D+ + G LE AR + + +
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTA-LLDMHAKFGNLEIARNIFDELGS 321
Query: 390 KANVVIWGCLMGACEKFGNVKMG 412
+ N V W ++ A + G + +
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLA 344
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 226/412 (54%), Gaps = 54/412 (13%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA------------ 136
WN + Y + E PK+AL+++ M G+ PD T +V +SC
Sbjct: 226 WNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTW-VVTISSCSSIGDPTLADSILRMI 284
Query: 137 ------------------------LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF 172
LEI R + LG + N + IS Y++ G
Sbjct: 285 DQKHIVLNSFVKTALLDMHAKFGNLEIARNIFD---ELGSQRNAVTWNIMISAYTRVGKL 341
Query: 173 EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC-GFEPDDVTMVSVTSA 231
AR++FD P+R + SWN++IAG +Q+G + +I++F + C +PD+VT+ SV SA
Sbjct: 342 SLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSA 401
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLML---NSLIDMYGKCGRMDLAYKVFWEIDQP 288
CG +G L+L+ V V ++K+ L + NSLI MY KCG + A+++F +
Sbjct: 402 CGHIGALKLSYWVLDIV-----REKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR 456
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
+V S+ ++I G+AANG EA+ M E GI P+HVT++GVL+AC H G + EGK+ F
Sbjct: 457 DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVF 516
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ ++ P HY CMVDLLGRAG L+EA+ +++ MPMK + ++G L+ A
Sbjct: 517 KSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKR 571
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
V +GE A L ELEP + G YV+LSNIYAS G WE+V+R+R +MK L K
Sbjct: 572 VGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKK 623
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 138/283 (48%), Gaps = 35/283 (12%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ ++ Y+K GD E AR+ FDE PER + SWNA+ + +Q KEA+++F + + G
Sbjct: 196 TSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGIT 255
Query: 220 PDDVTMVSVTSACGSLGDLELA-------------------------------LQVHKYV 248
PDD T V S+C S+GD LA L++ + +
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
F Q+ + + N +I Y + G++ LA ++F + + +V SW SMI GYA NG +
Sbjct: 316 FDELGSQR-NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAM 374
Query: 309 ALDCFHYMRES-GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+++ F M I+P+ VT VLSAC H G ++ ++++ I+ + + +
Sbjct: 375 SIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVRE-KNIKLGISGFNSL 433
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ + + G + +A + + M + +VV + L+ G+ K
Sbjct: 434 IFMYSKCGSVADAHRIFQTMGTR-DVVSFNTLISGFAANGHGK 475
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 156/383 (40%), Gaps = 76/383 (19%)
Query: 59 SKCTNLLQLNQIYAHIIRTHM----------------LHSYSA-------------AFHW 89
SK +N+ QL Q + H++ + LH++ A A +
Sbjct: 9 SKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSPSPDASVY 68
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
+ +++ Y+R+ A + + ++ + P + ++K A + G H+ ++
Sbjct: 69 SCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIK-----LAGKSGNLFHAYVLK 123
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
LG + F + + +Y+K G + AR +F++ ER L WN++I+G + G EA+ +
Sbjct: 124 LGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEAVVL 183
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
F + + +T S+ + +GDLE
Sbjct: 184 FNMMPA----RNIITWTSMVTGYAKMGDLE------------------------------ 209
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
A + F E+ + +V SW +M YA EAL+ FH M E GI P+ T+V
Sbjct: 210 -------SARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWV 262
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM 389
+S+C G M+ + + F ++D+ + G LE AR + + +
Sbjct: 263 VTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTA-LLDMHAKFGNLEIARNIFDELGS 321
Query: 390 KANVVIWGCLMGACEKFGNVKMG 412
+ N V W ++ A + G + +
Sbjct: 322 QRNAVTWNIMISAYTRVGKLSLA 344
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 214/384 (55%), Gaps = 8/384 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y ++ +AL+++ M GV P +T+ +L L+ G+ +H + +
Sbjct: 179 WNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVM 238
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++G +S + I +Y K A +F+ E+ + SWN+II+ Q G +
Sbjct: 239 KMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLR 298
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT-------LM 261
+F + G PD VT+ +V AC L L ++H Y+ + K D L+
Sbjct: 299 LFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMI-INGLGKDDENGAVDNLLV 357
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
N+++DMY KCG M+ A K+F + + +V+SW MI+GY +G A EAL F M E+
Sbjct: 358 SNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEF 417
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+PN VT VGVLSAC H G V G+ F M++ + + P HY C++D+LGRAG LE+A
Sbjct: 418 KPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAY 477
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+V+ MP++AN V+W L+GAC GN ++ E A+ + +LEP G+YV++SN+Y G
Sbjct: 478 EIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIG 537
Query: 442 LWEEVERIRAVMKHRNLAKIPAYS 465
+EEV +R MK +N+ K P S
Sbjct: 538 RYEEVLEVRKTMKEQNVKKTPGCS 561
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 155/321 (48%), Gaps = 13/321 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N II + K Y M GV+PD YT P V++ C++ + +++H
Sbjct: 79 FAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGC 135
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+++GLE + F S ++ Y K G E A+KVF E R + WNA+I G ++ G EA
Sbjct: 136 LLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEA 195
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+++F + G P T+ + S S GDL+ VH V +K S + N+LI
Sbjct: 196 LEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIV--MKMGYDSGVSVSNALI 253
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKC + A +F I++ ++ SW S+I + G + L F M SGI P+ V
Sbjct: 254 DMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLV 313
Query: 327 TFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMV-----DLLGRAGLLEE 379
T VL AC H + G+ H + ++ + + + A +V D+ + G +
Sbjct: 314 TITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNN 373
Query: 380 ARAMVEGMPMKANVVIWGCLM 400
A + + M K +V W ++
Sbjct: 374 ALKIFDSMS-KKDVASWNIMI 393
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF-DENPERKLGSWNAIIA 195
L G+QLHSL + G + + I++YSK G +A VF D ER + ++NAII+
Sbjct: 27 LNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERNVFAYNAIIS 86
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G +G A + + ++ G PD T V C + +++ ++H + +K
Sbjct: 87 GFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK---KIHGCL--LKMGL 141
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
+ D + ++L++ Y K G M+ A KVF E+ +V W +MI GYA G +EAL+ F
Sbjct: 142 ELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRR 201
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRA 374
M G+ P+ T G+LS G + GK + MK Y + + ++D+ G+
Sbjct: 202 MHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGY--DSGVSVSNALIDMYGKC 259
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ +A + E M + ++ W ++ E+ G+
Sbjct: 260 KHIGDALIIFE-MINEKDIFSWNSIISVHEQCGD 292
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 220/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +++ Y R+ + ++ M + G + V+ A+C+ L +GR + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+E + S + +Y K G+ +AR+VFD ++ + +WNA+I G +Q+G + EAI
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ G PD +T+ V SAC ++G LEL ++ Y + S+ + +L+D
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYA--SRRGLYSNVYVGTALVD 398
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG +D A +VF ++ NV+SW ++I G A NG +EA+ F MR E G++P+ +
Sbjct: 399 MYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V++GK +F + +QI P+ HY CMVDLL R+G LEEA +E
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++GE V + +LEP + YVV S IYAS ++
Sbjct: 519 IPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDS 578
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M+ R + K P S
Sbjct: 579 AKMRGLMRERGVNKTPGCS 597
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 175/324 (54%), Gaps = 12/324 (3%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
HS AF +N IR + P +L +++ M R+ + PD YTLP +L A+ + A +
Sbjct: 113 HSAPTAFSYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLA 171
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R H+L ++GL ++ I++YS D ARKVFD P R + SWNA++ +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRV 231
Query: 201 GRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G E MF + K G P+ VT+ V +AC GDL L V ++ + ++ + D+
Sbjct: 232 GMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWS--ARMEMDS 289
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L+ ++L+ MY KCG + A +VF I ++ +W +MI GYA NG++NEA+ FH MR +
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRAGL 376
G+RP+ +T GVLSAC G ++ G + + +Y + G +VD+ + G
Sbjct: 350 GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYS----NVYVGTALVDMYAKCGD 405
Query: 377 LEEARAMVEGMPMKANVVIWGCLM 400
L++A + MP K NV W L+
Sbjct: 406 LDKAIEVFRKMPCK-NVASWNALI 428
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 216/362 (59%), Gaps = 3/362 (0%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+A+++++ + R VLP+ +T VL+A + L +G Q+H +++GL S+ F + +
Sbjct: 122 EAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALM 180
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
+Y+K G E + ++F E+P R +WN +I G Q G ++A+ +F+ + + + +V
Sbjct: 181 DVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 240
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T S AC SL LE LQ+H VK+ D ++ N+LIDMY KCG + A VF
Sbjct: 241 TYSSALRACASLAALEPGLQIHS--LTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFD 298
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+++ + SW +MI GY+ +GL EAL F M+E+ ++P+ +TFVGVLSAC + G + +
Sbjct: 299 LMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQ 358
Query: 344 GKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
G+ +F M + IEP HY CMV LLGR G L++A +++ +P + +V++W L+GAC
Sbjct: 359 GQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGAC 418
Query: 404 EKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
++++G A+ + E+EP +V+LSN+YA+ W+ V +R MK + + K P
Sbjct: 419 VIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPG 478
Query: 464 YS 465
S
Sbjct: 479 LS 480
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 148/307 (48%), Gaps = 6/307 (1%)
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G+ LH ++ G + F + +++Y K+ A K+FDE PER S+ +I G ++
Sbjct: 57 GKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAE 116
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
R EAI++F+ L + P+ T SV AC ++ L L Q+H +V +K SD
Sbjct: 117 SVRFLEAIELFVRLHR-EVLPNQFTFASVLQACATMEGLNLGNQIHCHV--IKIGLHSDV 173
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ N+L+D+Y KCGRM+ + ++F E N +W ++IVG+ G +AL F M E
Sbjct: 174 FVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEY 233
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEE 379
++ VT+ L AC ++ G + + ++D+ + G +++
Sbjct: 234 RVQATEVTYSSALRACASLAALEPGLQIHSLTVKT-TFDKDIVVTNALIDMYAKCGSIKD 292
Query: 380 ARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYA 438
AR + + M K + V W ++ G + + +QE E D +V + + A
Sbjct: 293 ARLVFDLMN-KQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACA 351
Query: 439 SRGLWEE 445
+ GL ++
Sbjct: 352 NAGLLDQ 358
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I + +L +KAL +++ M V T L+A L ALE G Q+HSL V
Sbjct: 207 WNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTV 266
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + + + I +Y+K G + AR VFD ++ SWNA+I+G S G +EA+
Sbjct: 267 KTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALR 326
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM--LNSLI 266
+F +++ +PD +T V V SAC + G L+ Q Y + + + ++
Sbjct: 327 IFDKMQETEVKPDKLTFVGVLSACANAGLLD---QGQAYFTSMIQDHGIEPCIEHYTCMV 383
Query: 267 DMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ G+ G +D A K+ EI QP+V W +++
Sbjct: 384 WLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 221/443 (49%), Gaps = 69/443 (15%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAG-------VLPDCYTLPIVLKASCQLFALEI 139
F +N +IR +AP+ A+ IY M+R + PD T P VL+A + A E
Sbjct: 74 FMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPFVLRACAAMGAGET 133
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
G Q+H+ V+ G ES+ F + I +++ GD A +FD +W+A+I+G ++
Sbjct: 134 GAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDAVAWSAMISGFAR 193
Query: 200 DGR---AKEAID-------------------------------------------MFIGL 213
G A+E D M G
Sbjct: 194 RGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDRDVVSWNAMISGY 253
Query: 214 KKCG--------FE--------PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+CG FE PD VTM+S+ SAC GDL+ ++H ++ S+
Sbjct: 254 VRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLHGFLSGRFSRIGP 313
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
T + N+LIDMY KCG M A +VFW + NVS+W S+I G A +G A E++ F M
Sbjct: 314 TTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKML 373
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+ ++P+ +TFV VL+AC HGG V +G +F +M+ Y+IEP HYGCMVD+L R GLL
Sbjct: 374 QGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLL 433
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+EA + M ++ N VIW L+GAC G +++ E + L + + G +V+LSNIY
Sbjct: 434 KEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNIY 493
Query: 438 ASRGLWEEVERIRAVMKHRNLAK 460
AS G W E +R +M + K
Sbjct: 494 ASVGEWPGSENMRKLMDDSGVNK 516
>gi|357141422|ref|XP_003572219.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Brachypodium distachyon]
Length = 571
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 216/398 (54%), Gaps = 16/398 (4%)
Query: 79 MLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFAL 137
+L ++ F +N IR P A+ +Y M + P+ YT P +L A +L
Sbjct: 50 LLQAHPTTFSYNTTIRSLAHGPRPHLAVALYRSMLLNPLSNPNNYTYPPLLAACARLLPA 109
Query: 138 EIGRQ------LHSLAVRLGLES-NEFCESGFISLYSKAGDFEKARKVFDENP--ERKLG 188
R+ +H+ R GLES + F + +S Y+ AGD AR+VFD +P +R L
Sbjct: 110 HPPREAAAGTAVHASLFRRGLESRDRFISASMLSFYAAAGDLPAAREVFDRSPPNQRDLA 169
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV 248
WN+++ G + +F + D+VT+++V SAC LG L+ H Y
Sbjct: 170 LWNSLLHAYLSQGLYTHVLRLFRQM----VATDEVTLLAVVSACSHLGALDTGRWAHAY- 224
Query: 249 FQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE 308
++ + + + +L++MY +CG ++ A+ VF E+ +V +W+ MI G A NGL +
Sbjct: 225 -HARTCRNTTRNLGTALLNMYMRCGDVESAWSVFHEMLDKDVRTWSVMIAGLAVNGLPRD 283
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMV 368
AL F M+ G+ P+ +T VLSAC H G V EGK F M Y ++P HYGC+V
Sbjct: 284 ALKLFAEMKNIGVDPDSITMTAVLSACSHAGMVDEGKMFLHCMPIEYHLQPTIEHYGCVV 343
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG 428
DLLGRAG LEEA A++E +P KA+V +WG L+ AC NV MG+ A + +L+P G
Sbjct: 344 DLLGRAGQLEEALALIETVPFKADVALWGALLVACRAHKNVDMGQMAAMEILKLDPHHAG 403
Query: 429 AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A V LSN YA+ G W+ V+ +R+ MK + K P S+
Sbjct: 404 ACVFLSNAYAAAGKWDLVQEVRSSMKEHRIYKPPGSSI 441
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 224/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
WN ++R Y R A+ + M R+GV PD TL + A + L +GR++H
Sbjct: 118 WNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMD 177
Query: 145 -----SLAVRLGL----ESNEFCESG-----------------FISLYSKAGDFEKARKV 178
+L V L N+ E +S Y AG +KAR +
Sbjct: 178 NVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVL 237
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
F++ E+ L W A+I Q G +EA+ +F ++ EPD T+V++ + C +LG L
Sbjct: 238 FNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGAL 297
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
+ +H+Y Q K K D ++ +LIDMY KCG ++ + +VFW + + ++WT++I
Sbjct: 298 DQGEWIHQYAEQ--RKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIIC 355
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
G A NG A AL+ F M+ S ++P+ VTF+GVLSAC HGG V EG+ F M+ VYQIE
Sbjct: 356 GLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIE 415
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-IWGCLMGACEKFGNVKMGEWVAK 417
PR HY C+V+LLGRAGLL+EA ++ +P+ + + ++G L+ AC+ GNV+M E + K
Sbjct: 416 PRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTK 475
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
+ E + +++SN+YA+ WE+V R+R M H + K SL
Sbjct: 476 RICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCSL 524
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 158/324 (48%), Gaps = 11/324 (3%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N +IR R + + + +Y + G++ D +T P VL+A L GR+ H+ AV+
Sbjct: 18 NVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVK 77
Query: 150 LGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDM 209
G + + S + +Y+ G + ARKVFDE P R L WN ++ + G A+ +
Sbjct: 78 TGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVAL 137
Query: 210 FIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+++ G PD VT+V+ +AC DL L ++H Y+ V + + N+L+DMY
Sbjct: 138 SEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFG---FNLPVANALLDMY 194
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
K ++ A K+F ++ N+ SWT ++ GY G ++A F+ +E + + +
Sbjct: 195 TKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDL----ILWT 250
Query: 330 GVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM---VEG 386
+++ACV G +E F M+ + ++EP ++ G L++ + E
Sbjct: 251 AMINACVQHGCFEEALTLFRDMQ-MQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQ 309
Query: 387 MPMKANVVIWGCLMGACEKFGNVK 410
MK + V+ L+ K G+++
Sbjct: 310 RKMKIDAVLGTALIDMYSKCGHIE 333
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + E K AL + M + G+ PD L + + A+ G Q+H+
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + ++LY++ G +A F+E + +WN +++G +Q G +EA+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + + T VS SA +L +++ Q+H V +K+ +T + N+LI +
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV--IKTGHSFETEVGNALISL 591
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG + A F E+ + N SW ++I + +G EALD F M++ GI+PN VTF
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTF 651
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V+EG +F+ M + Y I PR HY C++D+ GRAG L+ A+ +E MP
Sbjct: 652 IGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMP 711
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ A+ ++W L+ AC+ N+++GE+ AKHL ELEP +YV+LSN YA W ++
Sbjct: 712 IAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQ 771
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ R + K P S
Sbjct: 772 VRKMMRDRGVRKEPGRS 788
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + ++ K+ +++ M AG+ P+ +T P +L+ +++G Q+HSL+V
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ + I +YSK G EKAR+V + E+ + SW ++IAG Q K+A+
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++KCG PD++ + S S C + + LQ+H ++ S D + N+L+++
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY--VSGYSGDVSIWNALVNL 490
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR+ A+ F EI+ + +W ++ G+A +GL EAL F M +SG++ N TF
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V LSA + ++++GK ++K + E + ++ L G+ G E+A+ M
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEM 608
Query: 388 PMKANVVIWGCLMGACEKFG 407
+ N V W ++ +C + G
Sbjct: 609 SER-NEVSWNTIITSCSQHG 627
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 172/339 (50%), Gaps = 4/339 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + ++AL +Y M RAGV+P Y L VL + + GR +H+
Sbjct: 111 WVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S F + I+LY + G F A +VF + P R ++N +I+G +Q G + A++
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD VT+ S+ +AC SLGDL+ Q+H Y+F K+ SD +M SL+D+
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF--KAGISSDYIMEGSLLDL 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F D+ NV W M+V + ++ + F M+ +GIRPN T+
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L C ++ G+ + E G ++D+ + G LE+AR ++E M
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLE-ML 406
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ +VV W ++ + K K +Q+ W D
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPD 445
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 24/319 (7%)
Query: 100 EAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFAL-------EIGRQLHSLAVRL 150
E P K L ++ +R G+ P L +C L A ++ ++H+ AV
Sbjct: 20 EDPAKVLSLFADKARQHGGLGP--------LDFACALRACRGNGRRWQVVPEIHAKAVTR 71
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
GL + I LYSK G AR+VF+E R SW A+++G +Q+G +EA+ ++
Sbjct: 72 GLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLY 131
Query: 211 IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
+ + G P + SV S+C +H + K S+ + N++I +Y
Sbjct: 132 RQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY--KHGFCSEIFVGNAVITLYL 189
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
+CG LA +VF ++ + ++ ++I G+A G AL+ F M+ SG+ P+ VT
Sbjct: 190 RCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISS 249
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+L+AC G +Q+G + I + G ++DL + G +E A + +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-R 307
Query: 391 ANVVIWGCLMGACEKFGNV 409
NVV+W ++ A FG +
Sbjct: 308 TNVVLWNLMLVA---FGQI 323
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 228/417 (54%), Gaps = 12/417 (2%)
Query: 50 PAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY 109
P + T SK ++++ +++ ++R + WN++I Y ++AL ++
Sbjct: 153 PMNCLITGYSKSGDVVKARRLFDGMVR-------RTSASWNSMIACYAHGGEYQEALRLF 205
Query: 110 IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKA 169
M G P+ T+ + + LE G+ SL L+ N + + +Y K
Sbjct: 206 RRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQ-NMIVHTALMEMYVKC 264
Query: 170 GDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
++AR+ FD +R + +W+ +IAG +Q+GR E++++F +K +P++VT+V V
Sbjct: 265 RAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVL 324
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQP 288
SAC LG EL Q+ +V +S+ T L S LIDMY KCG + A VF ++
Sbjct: 325 SACAQLGSDELGGQIGSHV---ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHK 381
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF 348
V +W SM+ G A NG A +A+ + M E ++PN +TFV +L+AC H G V +G FF
Sbjct: 382 VVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFF 441
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ MK ++ + P+ H C+VDLL ++G L EA + M ++ N VIW L+ AC +
Sbjct: 442 KEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHAD 501
Query: 409 VKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V++ + A L LEP + YV+LSNIYA GLW +V IR +M+ +N+ K+ AYS
Sbjct: 502 VELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYS 558
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 172/345 (49%), Gaps = 44/345 (12%)
Query: 91 NIIRLYTRLEAPKKALDIYIFMSRAG--VLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+I +RL + ++ LD + + R G V P C +P+V+K+ L A G+Q+H A+
Sbjct: 55 TLISALSRLCSHQELLDAFSSLHRRGSDVPPGC--VPLVVKSCAILAASRQGKQVHCHAI 112
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENP------------------------- 183
GL + F ++ + Y+K GD + A KVFDE P
Sbjct: 113 VRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSKSGDVVKARR 172
Query: 184 ------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
R SWN++IA + G +EA+ +F + G P+ +T+ ++ S C GD
Sbjct: 173 LFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARPNAITIATMFSICAKTGD 232
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
LE K+ + ++Q +++++ L++MY KC +D A + F + Q +V +W++M
Sbjct: 233 LETG----KWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRDVVAWSTM 288
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GYA NG +E+L+ F M+ + +PN VT VGVLSAC G + G +++ Q
Sbjct: 289 IAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVES--Q 346
Query: 357 IEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
P ++ G ++D+ + G + AR++ M K V+ W +M
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKV-VITWNSMM 390
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 105/274 (38%), Gaps = 36/274 (13%)
Query: 165 LYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVT 224
L S A AR +FD P +I+ LS+ +E +D F L + G +
Sbjct: 28 LLSDASTSRAARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGC 87
Query: 225 MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
+ V +C L QVH + + D + +L+D Y K G MD A KVF E
Sbjct: 88 VPLVVKSCAILAASRQGKQVHCHA--IVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDE 145
Query: 285 --IDQP-----------------------------NVSSWTSMIVGYAANGLANEALDCF 313
+ P +SW SMI YA G EAL F
Sbjct: 146 MPVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLF 205
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M G RPN +T + S C G ++ GK ++ ++ H M ++ +
Sbjct: 206 RRMLSEGARPNAITIATMFSICAKTGDLETGKWARSLIAE-QDLQNMIVHTALM-EMYVK 263
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++EAR + M + +VV W ++ + G
Sbjct: 264 CRAIDEARREFDRMQQR-DVVAWSTMIAGYAQNG 296
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 221/409 (54%), Gaps = 33/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLHSLA 147
W ++ Y R +A ++ M G + P+ TL + A Q+ L G LH
Sbjct: 212 WTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKYV 271
Query: 148 VRLGLESNEFCESGFISL-------------------------------YSKAGDFEKAR 176
G+ + ++ + + Y+K GD E A
Sbjct: 272 TEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLESAE 331
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
++F + P R + SW+ +IA SQ + +EA+ +F + G +P D T+VSV SAC LG
Sbjct: 332 QLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACAQLG 391
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L+L +++ + V +K + N+LIDM+ KCG + A K+F E+ + NV SW +M
Sbjct: 392 CLDLGRWIYEN-YIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNVVSWNTM 450
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I+ +A +G + EA+ F ++ I P+ +TF+G+L++C H G V EG+ +F+ M+ Y+
Sbjct: 451 IMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYR 510
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
IEPR HY CM+DLLG+ GLLEEA + GMPM+A+ WG L+ AC GNV++G VA
Sbjct: 511 IEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVEIGACVA 570
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L EL+P G YV++S IYAS+ W++V+ +R M+ R + K P S
Sbjct: 571 DKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCS 619
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 180/426 (42%), Gaps = 48/426 (11%)
Query: 18 SHPLLHRLCKTHTFRKHVTISA--ASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHII 75
+HPLL L +FR+ + + A + L H PA ++L L ++
Sbjct: 35 THPLLSLLESCASFRRLLQLHALLTVTGLAAHRFPA----SRLLAFCALSTPPRLAHAAA 90
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
A+ ++R + R P +AL ++ + R + D T +KA+
Sbjct: 91 ILARASPGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAA 150
Query: 136 ALE------IGRQLHSLAVRLGLESNE-FCESGFISLYSKAGDFEKARKVFDENPERKLG 188
E G +H A++ G + + Y+ + A KVFDE PER +
Sbjct: 151 ESEHGGTPSGGEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVV 210
Query: 189 SWNAIIAGLSQDGRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKY 247
SW ++ G ++ G A EA +F + G P+ VT+V+ SA G +G L + +HKY
Sbjct: 211 SWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTLVAAVSAIGQMGLLAFGIMLHKY 270
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG--- 304
V + + + + N+L+DM+GKCG + A +VF ++ +V SWTSM+ YA G
Sbjct: 271 VTEGGVARSVN--LDNALVDMFGKCGCVRYAREVFDGMEVKDVYSWTSMVNAYAKCGDLE 328
Query: 305 ----------------------------LANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
EA+ F M +G+ P T V VLSAC
Sbjct: 329 SAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACA 388
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
G + G+ +E +I ++D+ + G + EA + + M + NVV W
Sbjct: 389 QLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAER-NVVSW 447
Query: 397 GCLMGA 402
++ A
Sbjct: 448 NTMIMA 453
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 207/360 (57%), Gaps = 7/360 (1%)
Query: 108 IYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS 167
+++ M GV PD YT +LKA A E GRQ H +AV+ G +E+ I++Y+
Sbjct: 125 VFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYA 184
Query: 168 KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVS 227
+ GD AR +FD + S+NA+I + EA+ +F ++ G +P VT++S
Sbjct: 185 ECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLIS 244
Query: 228 VTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML--NSLIDMYGKCGRMDLAYKVFWEI 285
V SAC LG LEL +H Y+ K + D+L+ +LIDMY KCG ++ A VF ++
Sbjct: 245 VLSACALLGALELGRWIHDYI----RKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300
Query: 286 DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
+ + +W+ M+V YA +G EA+ F M++ G++P+ VTF+GVL AC H G V EG
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360
Query: 346 HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
+F+ M+ Y I HYGC+ DLL R+G LE A ++ +P+K ++W L+ AC
Sbjct: 361 QYFDSMRE-YGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPIKPTAILWRTLLSACAG 419
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
G+V MG+ V + + EL+ G YV+ SN+ A+ G WEE+ +R +M + + K+P S
Sbjct: 420 HGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVVKVPGCS 479
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 213/381 (55%), Gaps = 5/381 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDC--YTLPIVLKASCQLFALEIGRQLH 144
F WN +I Y +ALD++ M + +C +TL L A+ + +L G+++H
Sbjct: 161 FSWNAVISGYVSQGWYMEALDLFRMM-QENESSNCNMFTLSSALAAAAAISSLRRGKEIH 219
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+R GLE +E + + LY K G +AR +FD+ ++ + SW +I +DGR K
Sbjct: 220 GYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKK 279
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
E +F L G P++ T V +AC L ++ +VH Y+ +V S ++
Sbjct: 280 EGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFS--FAASA 337
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ +Y KCG + A +VF ++ +P++ SWTS+IVGYA NG + AL F + SG +P+
Sbjct: 338 LVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPD 397
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TFVGVLSAC H G V G +F +K + + HY C++DLL R+G +EA ++
Sbjct: 398 EITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MPMK + +W L+G C GN+++ E AK L ELEP + Y+ LSNIYA+ GLW
Sbjct: 458 DNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWT 517
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
E ++R M +R + K P S
Sbjct: 518 EETKVRNDMDNRGIVKKPGKS 538
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 128/252 (50%), Gaps = 9/252 (3%)
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS Y+ G E+ARK+FDE P R SWNA+I+G G EA+D+F +++ E +
Sbjct: 136 ISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQEN--ESSN 193
Query: 223 VTMVSVTSACGSLGDLEL---ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
M +++SA + + ++H Y+ ++S + D ++ +L+D+YGKCG ++ A
Sbjct: 194 CNMFTLSSALAAAAAISSLRRGKEIHGYL--IRSGLELDEVVWTALLDLYGKCGSLNEAR 251
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+F ++ ++ SWT+MI +G E F + SG+RPN TF GVL+AC
Sbjct: 252 GIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLA 311
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
Q GK M V FA +V + + G E AR + MP + ++V W L
Sbjct: 312 AEQMGKEVHGYMTRVGYDPFSFA-ASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSL 369
Query: 400 MGACEKFGNVKM 411
+ + G M
Sbjct: 370 IVGYAQNGQPDM 381
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
+ II Q R KEA+D + +P ++ +AC LEL +VH +
Sbjct: 35 FEEIIELFCQQNRLKEAVDYLHRIP----QPSPRLYSTLIAACLRHRKLELGKRVHAHT- 89
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA-------- 301
S ++ N LI MY KCG + A +F EI Q ++ SW +MI GYA
Sbjct: 90 -KASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQA 148
Query: 302 -----------------------ANGLANEALDCFHYMRES-GIRPNHVTFVGVLSACVH 337
+ G EALD F M+E+ N T L+A
Sbjct: 149 RKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAA 208
Query: 338 GGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ GK ++++ +++ + ++DL G+ G L EAR + + M K ++V W
Sbjct: 209 ISSLRRGKEIHGYLIRSGLELDE--VVWTALLDLYGKCGSLNEARGIFDQMADK-DIVSW 265
Query: 397 GCLMGACEKFGNVKMG 412
++ C + G K G
Sbjct: 266 TTMIHRCFEDGRKKEG 281
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 219/390 (56%), Gaps = 39/390 (10%)
Query: 112 MSRAGVLPDCYTLPIVLKASCQLF---ALEIGRQLHSLAVRLGLE-SNEFCESGFISLYS 167
M AGV P+ T I L + C F + +G LH A +LGL+ ++ + + +YS
Sbjct: 9 MRFAGVEPNHITF-IALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYS 67
Query: 168 KAGDFEKAR-------------------------------KVFDENPERKLGSWNAIIAG 196
K G F KAR K+FDE R L SW A++ G
Sbjct: 68 KRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMVNG 127
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQK 256
+ G +EA+ F ++ G +PD V +++ +AC +LG L L +H+YV + K
Sbjct: 128 FVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYV--MSQDFK 185
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
++ + NSLID+Y +CG ++ A +VF ++++ V SW S+IVG+AANG A+E+L F M
Sbjct: 186 NNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLFYFRKM 245
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGL 376
+E G +P+ VTF G L+AC H G V+EG +F+ MK Y+I PR HYGC+VDL RAG
Sbjct: 246 QEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGR 305
Query: 377 LEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVKMGEWVAKHLQELEPWSDGAYVVLSN 435
LE+A +V+ MPMK N V+ G L+ AC+ G N + E + KHL +L S YV+LSN
Sbjct: 306 LEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSN 365
Query: 436 IYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+YA+ G WE ++R MK L K P +S
Sbjct: 366 MYAADGKWEGASKMRRKMKGLGLKKQPGFS 395
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 8/205 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ + + ++AL + M +GV PD + L A L AL G +H +
Sbjct: 121 WTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVM 180
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++N + I LY + G E AR+VFD+ +R + SWN++I G + +G A E++
Sbjct: 181 SQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLF 240
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL---QVHKYVFQVKSKQKSDTLMLNSL 265
F +++ GF+PD VT +AC +G +E L Q K +++ + + +
Sbjct: 241 YFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEH----YGCI 296
Query: 266 IDMYGKCGRMDLAYKVFWEID-QPN 289
+D+Y + GR++ A KV + +PN
Sbjct: 297 VDLYSRAGRLEDALKVVQSMPMKPN 321
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 47/284 (16%)
Query: 210 FIGLKKCGFEPDDVTMVSVTSACG-------SLGDL------ELALQ-----VHKYVFQV 251
F ++ G EP+ +T +++ S CG +LGDL +L L V + +
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65
Query: 252 KSK--------------QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
SK + +++ N++ID Y + G+++ A K+F E+ ++ SWT+M+
Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRDLISWTAMV 125
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
G+ G EAL F M+ SG++P++V + L+AC + G + G H + M ++ +
Sbjct: 126 NGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQD-F 184
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+ R ++ ++DL R G +E AR + + M K VV W ++ GN +
Sbjct: 185 KNNVRVSN--SLIDLYCRCGCVEFARQVFDKME-KRTVVSWNSVIVGFAANGNAHESLFY 241
Query: 416 AKHLQE--LEPWS---DGAYVVLSNIYASRGLWEEVERIRAVMK 454
+ +QE +P + GA S++ GL EE R MK
Sbjct: 242 FRKMQEEGFKPDAVTFTGALTACSHV----GLVEEGLRYFQTMK 281
>gi|115486035|ref|NP_001068161.1| Os11g0583200 [Oryza sativa Japonica Group]
gi|113645383|dbj|BAF28524.1| Os11g0583200 [Oryza sativa Japonica Group]
Length = 703
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 208/381 (54%), Gaps = 3/381 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ P + ++ Y + AG LP+ + A L +G Q H V
Sbjct: 188 WNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVV 247
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G E + + + Y K KAR VFD R SW +++A +Q+G +EA
Sbjct: 248 KCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFA 307
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
++G ++ G EP D + S + C L L L +H V+S ++ + ++L+DM
Sbjct: 308 AYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRALH--AVAVRSCIDANIFVASALVDM 365
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
YGKCG ++ A ++F+E Q N+ +W +MI GYA G A AL F M SG PN++T
Sbjct: 366 YGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYIT 425
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V V+++C GG ++G FE M+ + IEPR HY C+VDLLGRAG+ E+A +++GM
Sbjct: 426 LVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGM 485
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ ++ +WG L+GAC+ G ++G A+ L EL+P G +V+LSN++AS G W E
Sbjct: 486 PMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEAT 545
Query: 448 RIRAVMKHRNLAKIPAYSLAT 468
IR MK+ + K P S T
Sbjct: 546 DIRKEMKNVGIKKDPGCSWVT 566
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 145/311 (46%), Gaps = 6/311 (1%)
Query: 102 PKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALE-IGRQLHSLAVRLG-LESNEFCE 159
P AL + M R G+ P+ +T P KA+ IG Q+HSLA+R G L + F
Sbjct: 98 PLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVS 157
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ +Y K G + AR +F E P R + +WNA++ DGR E I+ + GL++ G
Sbjct: 158 CAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGL 217
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
P+ V+ + +AC L L Q H +V VK + D +LNS++D YGKC A
Sbjct: 218 PNVVSACAFFNACAGAMYLSLGEQFHGFV--VKCGFEMDVSVLNSMVDFYGKCRCAGKAR 275
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
VF + N SW SM+ YA NG EA + R SG P L+ C
Sbjct: 276 AVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLL 335
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
+ G+ + I+ +VD+ G+ G +E+A + P + N+V W +
Sbjct: 336 GLHLGRALHAVAVRSC-IDANIFVASALVDMYGKCGCVEDAEQIFYETPQR-NLVTWNAM 393
Query: 400 MGACEKFGNVK 410
+G G+ +
Sbjct: 394 IGGYAHIGDAQ 404
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 138 EIGRQLHSLAVRLGLES-NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
+GR H+ A+RL + + F + ++LYSK A +P + S+ A I+G
Sbjct: 32 RLGRAAHARALRLIAPALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91
Query: 197 LSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE-LALQVHKYVFQVKSKQ 255
+Q GR A+ F G+ + G P+D T S A S + Q+H +
Sbjct: 92 AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRF-GYL 150
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + + +DMY K GR+ LA +F E+ NV +W +++ +G E ++ +
Sbjct: 151 PVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFG 210
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGKHF--------FEMMKNVYQIEPRFAHYGCM 367
+RE+G PN V+ +AC + G+ F FEM +V M
Sbjct: 211 LREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN---------SM 261
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
VD G+ +ARA+ +GM ++ N V W ++ A + G
Sbjct: 262 VDFYGKCRCAGKARAVFDGMGVR-NSVSWCSMVAAYAQNG 300
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 220/379 (58%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +++ Y R+ + ++ M + G + V+ A+C+ L +GR + +
Sbjct: 221 WNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWS 280
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+E + S + +Y K G+ +AR+VFD ++ + +WNA+I G +Q+G + EAI
Sbjct: 281 WSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAI 340
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F ++ G PD +T+ V SAC ++G LEL ++ Y + S+ + +L+D
Sbjct: 341 SLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSELDGYA--SRRGLYSNVYVGTALVD 398
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHV 326
MY KCG +D A +VF ++ NV+SW ++I G A NG +EA+ F MR E G++P+ +
Sbjct: 399 MYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDI 458
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF+GVLSACVH G V++GK +F + +QI P+ HY CMVDLL R+G LEEA +E
Sbjct: 459 TFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEK 518
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
+P K + V+ G L+ AC K NV++GE V + +LEP + YVV S IYAS ++
Sbjct: 519 IPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDS 578
Query: 447 ERIRAVMKHRNLAKIPAYS 465
++R +M+ R + K P S
Sbjct: 579 AKMRGLMRERGVNKTPGCS 597
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 175/324 (54%), Gaps = 12/324 (3%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
HS AF +N IR + P +L +++ M R+ + PD YTLP +L A+ + A +
Sbjct: 113 HSAPTAFSYNVAIRFFAS-SRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLA 171
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
R H+L ++GL ++ I++YS D ARKVFD P R + SWNA++ +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRV 231
Query: 201 GRAKEAIDMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
G E MF + K G P+ VT+ V +AC GDL L V ++ + ++ + D+
Sbjct: 232 GMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWS--ARMEMDS 289
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
L+ ++L+ MY KCG + A +VF I ++ +W +MI GYA NG++NEA+ FH MR +
Sbjct: 290 LVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIA 349
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYG-CMVDLLGRAGL 376
G+RP+ +T GVLSAC G ++ G + + +Y + G +VD+ + G
Sbjct: 350 GMRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYS----NVYVGTALVDMYAKCGD 405
Query: 377 LEEARAMVEGMPMKANVVIWGCLM 400
L++A + MP K NV W L+
Sbjct: 406 LDKAIEVFRKMPCK-NVASWNALI 428
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
E +A+ ++ M G+ P +T +LKA + A E G+Q+H+ + L+S+EF
Sbjct: 308 EFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG 367
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ + LYS +G E K F P+ + SW ++I G Q+G+ + + +F L G +
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK 427
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD+ T+ + SAC +L ++ Q+H Y +K+ + T++ NS I MY KCG +D A
Sbjct: 428 PDEFTISIMLSACANLAAVKSGEQIHAYA--IKTGIGNFTIIQNSQICMYAKCGDIDSAN 485
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
F E P++ SW+ MI A +G A EA+D F M+ SGI PNH+TF+GVL AC HGG
Sbjct: 486 MTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 545
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG +FE+MK + I P H C+VDLLGRAG L EA + + + + V+W L
Sbjct: 546 LVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 605
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC G+ VA+ + ELEP + +YV+L NIY G+ IR +MK R +
Sbjct: 606 LSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVK 665
Query: 460 KIPAYS 465
K P S
Sbjct: 666 KEPGLS 671
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I YT++ + ++++ + + D +T L + L +GR +H+L
Sbjct: 88 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 147
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL + I +Y K G + AR VF+ E SWN++IAG + G E +
Sbjct: 148 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 207
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGS--LGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + + + G + + S ACGS +E +H VK D ++ +L+
Sbjct: 208 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA--VKLGLDLDVVVGTALL 265
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY-----AANGLANEALDCFHYMRESGI 321
D Y K G ++ A K+F + PNV + +MI G+ A+ ANEA+ F M+ G+
Sbjct: 266 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 325
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+P+ TF +L AC + GK + Y ++ +V+L +G +E+
Sbjct: 326 KPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGL 384
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
P K +VV W L+ G+V+ G++
Sbjct: 385 KCFHSTP-KLDVVSWTSLI-----VGHVQNGQF 411
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 28/300 (9%)
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G+ D T +++ S + +L G+ H ++ + F + + +Y K G+ + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+K+FD P+R + SWN++I+G +Q G E +++F + D T + S CG
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
DL L +H + S L+ NSLIDMY KCGR+D A VF D+ + SW S
Sbjct: 134 LDLRLGRLIHALI--TVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNS 191
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-------------VHGGKVQ 342
+I GY G +E L M G+ N L AC +HG V+
Sbjct: 192 LIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVK 251
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G ++ ++D + G LE+A + + MP NVV++ ++
Sbjct: 252 LGLDLDVVVGTA------------LLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 217 GFEPDDVT---MVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCG 273
G D VT +V ++ GSL +LA ++ +K+ K +LN+L+ MY KCG
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLA-----HMHMIKTCFKPCLFLLNNLLYMYCKCG 68
Query: 274 RMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLS 333
D+A K+F + + NV SW S+I GY G +E ++ F R S +R + TF LS
Sbjct: 69 ETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALS 128
Query: 334 ACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANV 393
C ++ G+ + V + ++D+ + G ++ AR + E + +
Sbjct: 129 VCGRTLDLRLGR-LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESAD-ELDS 186
Query: 394 VIWGCLMGACEKFG-NVKMGEWVAKHLQ 420
V W L+ + G N +M + K L+
Sbjct: 187 VSWNSLIAGYVRIGSNDEMLRLLVKMLR 214
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 231/414 (55%), Gaps = 36/414 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMS-RAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
A WN +I Y R + ++A+D+Y M + P+ T+ L A L LE+G+++H
Sbjct: 174 AVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIH 233
Query: 145 S-LAVRLGLES-------NEFCESGFISL----------------------YSKAGDFEK 174
+A L L + +C+ G +S+ Y G ++
Sbjct: 234 DYIANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQ 293
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
AR +F+ +P R + W A+I G Q ++AI +F ++ G EPD +V++ + C
Sbjct: 294 ARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQ 353
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
LG LE +H Y+ + ++ K D ++ +LI+MY KCG ++ + ++F + + +SWT
Sbjct: 354 LGALEQGKWIHNYIDE--NRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWT 411
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
S+I G A NG +EAL+ F M+ G++P+ +TFV VLSAC H G V+EG+ F M ++
Sbjct: 412 SIICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSI 471
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVI---WGCLMGACEKFGNVKM 411
Y IEP HYGC +DLLGRAGLL+EA +V+ +P + N +I +G L+ AC +GN+ M
Sbjct: 472 YHIEPNLEHYGCFIDLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDM 531
Query: 412 GEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
GE +A L +++ + +L++IYAS WE+V ++R+ MK + K+P YS
Sbjct: 532 GERLATALAKVKSSDSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYS 585
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 174/349 (49%), Gaps = 38/349 (10%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
YA+ I H+ H + F +N +I+ + + + + A+ ++ + GV PD YT P VLK
Sbjct: 60 YANRIFNHIHHP--SLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKG 117
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+ + G ++H+ V+ GLE + + + + +Y++ G E +VF+E PER SW
Sbjct: 118 IGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSW 177
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
N +I+G + R +EA+D++ ++ + +P++ T+VS SAC L +LEL ++H Y
Sbjct: 178 NIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-- 235
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANE- 308
+ ++ +M N+L+DMY KCG + +A ++F + NV+ WTSM+ GY G ++
Sbjct: 236 -IANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQA 294
Query: 309 ------------------------------ALDCFHYMRESGIRPNHVTFVGVLSACVHG 338
A+ F M+ G+ P+ V +L+ C
Sbjct: 295 RYLFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQL 354
Query: 339 GKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
G +++GK + +I+ ++++ + G +E++ + G+
Sbjct: 355 GALEQGKWIHNYIDE-NRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGL 402
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 10/265 (3%)
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
S+ S GDF A ++F+ L +N +I + G + AI +F L++ G PD+
Sbjct: 50 SMDSSLGDFNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNY 109
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T V G +G++ ++H +V VK+ + D + NSL+DMY + G ++ +VF
Sbjct: 110 TYPYVLKGIGCIGEVREGEKIHAFV--VKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFE 167
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVTFVGVLSACVHGGKVQ 342
E+ + + SW MI GY EA+D + M+ ES +PN T V LSAC ++
Sbjct: 168 EMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLE 227
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
GK + + N + P + ++D+ + G + AR + + M +K NV W ++
Sbjct: 228 LGKEIHDYIANELDLTPIMGN--ALLDMYCKCGCVSVAREIFDAMIVK-NVNCWTSMVTG 284
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSD 427
G + A++L E P D
Sbjct: 285 YVICGQLDQ----ARYLFERSPSRD 305
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
T +S+ +C S+ L+ Q+ ++F +Q D L M G + A ++F
Sbjct: 10 TYISLLKSCKSMSQLK---QIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFN 66
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
I P++ + MI + G A+ F +RE G+ P++ T+ VL G+V+E
Sbjct: 67 HIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVRE 126
Query: 344 GK--HFFEMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
G+ H F ++K + +P Y C ++D+ GL+E + E MP + + V W +
Sbjct: 127 GEKIHAF-VVKTGLEFDP----YVCNSLMDMYAELGLVEGFTQVFEEMPER-DAVSWNIM 180
Query: 400 MGA---CEKF 406
+ C++F
Sbjct: 181 ISGYVRCKRF 190
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I Y + E K AL + M + G+ PD L + + A+ G Q+H+
Sbjct: 414 WTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G + + ++LY++ G +A F+E + +WN +++G +Q G +EA+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + + T VS SA +L +++ Q+H V +K+ +T + N+LI +
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARV--IKTGHSFETEVGNALISL 591
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG + A F E+ + N SW ++I + +G EALD F M++ GI+PN VTF
Sbjct: 592 YGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTF 651
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVL+AC H G V+EG +F+ M + Y I PR HY C++D+ GRAG L+ A+ +E MP
Sbjct: 652 IGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMP 711
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ A+ ++W L+ AC+ N+++GE+ AKHL ELEP +YV+LSN YA W ++
Sbjct: 712 IAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQ 771
Query: 449 IRAVMKHRNLAKIPAYS 465
+R +M+ R + K P S
Sbjct: 772 VRKMMRDRGVRKEPGRS 788
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 174/320 (54%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ + ++ K+ +++ M AG+ P+ +T P +L+ +++G Q+HSL+V
Sbjct: 313 WNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSV 372
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G ES+ + I +YSK G EKAR+V + E+ + SW ++IAG Q K+A+
Sbjct: 373 KTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALA 432
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F ++KCG PD++ + S S C + + LQ+H ++ S D + N+L+++
Sbjct: 433 AFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY--VSGYSGDVSIWNALVNL 490
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CGR+ A+ F EI+ + +W ++ G+A +GL EAL F M +SG++ N TF
Sbjct: 491 YARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
V LSA + ++++GK ++K + E + ++ L G+ G E+A+ M
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISLYGKCGSFEDAKMEFSEM 608
Query: 388 PMKANVVIWGCLMGACEKFG 407
+ N V W ++ +C + G
Sbjct: 609 SER-NEVSWNTIITSCSQHG 627
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 172/339 (50%), Gaps = 4/339 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++ Y + ++AL +Y M RAGV+P Y L VL + + GR +H+
Sbjct: 111 WVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY 170
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G S F + I+LY + G F A +VF + P R ++N +I+G +Q G + A++
Sbjct: 171 KHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALE 230
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD VT+ S+ +AC SLGDL+ Q+H Y+F K+ SD +M SL+D+
Sbjct: 231 IFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF--KAGISSDYIMEGSLLDL 288
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +F D+ NV W M+V + ++ + F M+ +GIRPN T+
Sbjct: 289 YVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTY 348
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+L C ++ G+ + E G ++D+ + G LE+AR ++E M
Sbjct: 349 PCILRTCTCTREIDLGEQIHSLSVKT-GFESDMYVSGVLIDMYSKYGWLEKARRVLE-ML 406
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ +VV W ++ + K K +Q+ W D
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPD 445
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 24/319 (7%)
Query: 100 EAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFAL-------EIGRQLHSLAVRL 150
E P K L ++ +R G+ P L +C L A ++ ++H+ AV
Sbjct: 20 EDPAKVLSLFADKARQHGGLGP--------LDFACALRACRGNGRRWQVVPEIHAKAVTR 71
Query: 151 GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
GL + I LYSK G AR+VF+E R SW A+++G +Q+G +EA+ ++
Sbjct: 72 GLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLY 131
Query: 211 IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG 270
+ + G P + SV S+C +H + K S+ + N++I +Y
Sbjct: 132 RQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGY--KHGFCSEIFVGNAVITLYL 189
Query: 271 KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
+CG LA +VF ++ + ++ ++I G+A G AL+ F M+ SG+ P+ VT
Sbjct: 190 RCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISS 249
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+L+AC G +Q+G + I + G ++DL + G +E A + +
Sbjct: 250 LLAACASLGDLQKGTQLHSYLFKA-GISSDYIMEGSLLDLYVKCGDVETALVIFNSSD-R 307
Query: 391 ANVVIWGCLMGACEKFGNV 409
NVV+W ++ A FG +
Sbjct: 308 TNVVLWNLMLVA---FGQI 323
>gi|255564460|ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537522|gb|EEF39147.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 488
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 227/397 (57%), Gaps = 14/397 (3%)
Query: 81 HSYSAAFH--------WNNIIRLYTRLEAPKKALDIYIFMSR-AGVLPDCYTLPIVLKAS 131
HS S FH WN II + R P+K++D++I M R + PD ++LP+VL+A
Sbjct: 88 HSLSTFFHMPCKNIYSWNIIIGEFARSNLPEKSVDLFIDMRRDSHFQPDDFSLPLVLRAC 147
Query: 132 CQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWN 191
++G +H L V++GL + F S + +Y G+ AR VFDE +R W
Sbjct: 148 AGSGLGKLGSSVHGLCVKMGLAVSLFVGSALVFMYVTFGNVSNARVVFDEMAKRDSVLWT 207
Query: 192 AIIAGLSQDGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
A+++G +Q+G K + +F + + D V MVS+ CG LG L+ VH +
Sbjct: 208 ALLSGYAQNGEPKLGLQVFREMVDNSTRVKLDWVVMVSLLLVCGQLGSLKHGKSVHGWC- 266
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
V++ + + + N+++ MY KCG + A++ F ++ + +V SW+S+I+GY +G + A
Sbjct: 267 -VRNCLRLELSLGNAIVHMYIKCGMLAYAHRFFDKMPERDVFSWSSLILGYGLSGNVSVA 325
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVD 369
L F M GI+PN VTF+G+LSAC HGG V++ + +F+MM+N Y + HY +VD
Sbjct: 326 LCLFDQMHMRGIKPNDVTFLGILSACGHGGLVEQARSYFKMMQN-YGLVAELRHYATIVD 384
Query: 370 LLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
L RAG EEA + +PM+ + + G ++ C NV++GE +AK L L+P G
Sbjct: 385 CLARAGRFEEAEKFISDIPMEPDEAVLGAILAGCRVHNNVEVGERIAKRLIRLKPEKAGY 444
Query: 430 YVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
YV+L+N+YA G + E E +R M+ +N++K+P SL
Sbjct: 445 YVLLANMYAGVGRFHEAEMVRDSMQEKNMSKVPGCSL 481
>gi|125528817|gb|EAY76931.1| hypothetical protein OsI_04889 [Oryza sativa Indica Group]
Length = 565
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 187/307 (60%), Gaps = 2/307 (0%)
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
S I Y K G AR+VFD P + L +W A+I G +Q G KE++ +F ++ G E
Sbjct: 214 SVLIVGYCKCGSMRSAREVFDRMPAKNLVAWTAMINGYAQSGVPKESLALFREMEAAGIE 273
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD TMV V SA +G ELA V YV + K +++D + L +L+DM+ KCG +D A
Sbjct: 274 PDAATMVGVISAASQIGSTELAGWVGSYVDK-KRIERNDKV-LTALVDMHAKCGNVDEAL 331
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
F EI QP+ +T++I G AA+G A AL F M+ + P+ +TFVGVL+AC H G
Sbjct: 332 SAFREIAQPDAYPYTALISGLAAHGHAKLALQVFERMQAQSVWPDPITFVGVLTACSHAG 391
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V +G ++E M Y +E R HY C+VD+LGRAG LEEA MV+ MPM + G L
Sbjct: 392 LVDKGLDYWEAMVKYYGMERRADHYACVVDMLGRAGRLEEAFEMVQTMPMGPHPGALGAL 451
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC+ GNV++ E VA L ELEP + G Y++LSNIYA + WEE ERIR+VM+ R
Sbjct: 452 LSACKTHGNVEIAEIVANKLFELEPHNTGNYIMLSNIYAEKEQWEEAERIRSVMRTRVPF 511
Query: 460 KIPAYSL 466
K P S+
Sbjct: 512 KQPGSSM 518
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y + PK++L ++ M AG+ PD T+ V+ A+ Q+ + E+ + S
Sbjct: 244 WTAMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGSTELAGWVGSYVD 303
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +E N+ + + +++K G+ ++A F E + + A+I+GL+ G AK A+
Sbjct: 304 KKRIERNDKVLTALVDMHAKCGNVDEALSAFREIAQPDAYPYTALISGLAAHGHAKLALQ 363
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS-KQKSDTLMLNSLID 267
+F ++ PD +T V V +AC G ++ L + + + ++++D ++D
Sbjct: 364 VFERMQAQSVWPDPITFVGVLTACSHAGLVDKGLDYWEAMVKYYGMERRADHYAC--VVD 421
Query: 268 MYGKCGRMDLAYKV 281
M G+ GR++ A+++
Sbjct: 422 MLGRAGRLEEAFEM 435
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 142/313 (45%), Gaps = 15/313 (4%)
Query: 117 VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEF-CESGFISLYSKAGDFEKA 175
V PD ++LP L A+ L L +G LH+LA+RL L + + LY+K D A
Sbjct: 77 VSPDHFSLPFALNAAASLRLLPLGASLHALALRLALLPGRLPVANALVDLYAKCDDLPAA 136
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGS 234
+ S+N+++ ++ +A +F + + + + +V V +
Sbjct: 137 HTALADIAAPDAVSFNSLLCAHARLASVPDAESLFAAMPSRTQVSWNAMVVVYVNA---- 192
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
GD+ A +V Q+ ++ D+ + LI Y KCG M A +VF + N+ +WT
Sbjct: 193 -GDVSSARRVFD---QMPTR---DSTSWSVLIVGYCKCGSMRSAREVFDRMPAKNLVAWT 245
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV 354
+MI GYA +G+ E+L F M +GI P+ T VGV+SA G E + +
Sbjct: 246 AMINGYAQSGVPKESLALFREMEAAGIEPDAATMVGVISAASQIGST-ELAGWVGSYVDK 304
Query: 355 YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+IE +VD+ + G ++EA + + + + + L+ G+ K+
Sbjct: 305 KRIERNDKVLTALVDMHAKCGNVDEALSAFREI-AQPDAYPYTALISGLAAHGHAKLALQ 363
Query: 415 VAKHLQELEPWSD 427
V + +Q W D
Sbjct: 364 VFERMQAQSVWPD 376
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 205/366 (56%), Gaps = 2/366 (0%)
Query: 100 EAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCE 159
E +A+ ++ M G+ P +T +LKA + A E G+Q+H+ + L+S+EF
Sbjct: 229 EFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG 288
Query: 160 SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
+ + LYS +G E K F P+ + SW ++I G Q+G+ + + +F L G +
Sbjct: 289 NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK 348
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD+ T+ + SAC +L ++ Q+H Y +K+ + T++ NS I MY KCG +D A
Sbjct: 349 PDEFTISIMLSACANLAAVKSGEQIHAYA--IKTGIGNFTIIQNSQICMYAKCGDIDSAN 406
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
F E P++ SW+ MI A +G A EA+D F M+ SGI PNH+TF+GVL AC HGG
Sbjct: 407 MTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGG 466
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG +FE+MK + I P H C+VDLLGRAG L EA + + + + V+W L
Sbjct: 467 LVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSL 526
Query: 400 MGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLA 459
+ AC G+ VA+ + ELEP + +YV+L NIY G+ IR +MK R +
Sbjct: 527 LSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVK 586
Query: 460 KIPAYS 465
K P S
Sbjct: 587 KEPGLS 592
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 152/333 (45%), Gaps = 16/333 (4%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I YT++ + ++++ + + D +T L + L +GR +H+L
Sbjct: 9 WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
GL + I +Y K G + AR VF+ E SWN++IAG + G E +
Sbjct: 69 VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGS--LGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + + + G + + S ACGS +E +H VK D ++ +L+
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA--VKLGLDLDVVVGTALL 186
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY-----AANGLANEALDCFHYMRESGI 321
D Y K G ++ A K+F + PNV + +MI G+ A+ ANEA+ F M+ G+
Sbjct: 187 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+P+ TF +L AC + GK + Y ++ +V+L +G +E+
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGL 305
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
P K +VV W L+ G+V+ G++
Sbjct: 306 KCFHSTP-KLDVVSWTSLI-----VGHVQNGQF 332
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELAL 242
P+R + SWN++I+G +Q G E +++F + D T + S CG DL L
Sbjct: 2 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 61
Query: 243 QVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+H + S L+ NSLIDMY KCGR+D A VF D+ + SW S+I GY
Sbjct: 62 LIHALI--TVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-------------VHGGKVQEGKHFFE 349
G +E L M G+ N L AC +HG V+ G
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
++ ++D + G LE+A + + MP NVV++ ++
Sbjct: 180 VVGTA------------LLDTYAKIGDLEDATKIFKLMP-DPNVVMYNAMIAG 219
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 215/377 (57%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + + K ALD++ M + GV D + V+ A L +E+G +H A+
Sbjct: 819 WGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAI 878
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F + +YSK G E A VF P + L +WN++I+ S +G + +I+
Sbjct: 879 KRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSIN 938
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+ + + GF D V++ +V A S+ L +H Y Q++ + SD + N+LIDM
Sbjct: 939 LLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAY--QIRLQIPSDLQVENALIDM 996
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A +F + + N+ +W SMI GY ++G EA+ F M+ S P+ VTF
Sbjct: 997 YVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTF 1056
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ ++++C H G V+EG + F++M+ Y +EPR HY +VDLLGRAG L++A + + GMP
Sbjct: 1057 LALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMP 1116
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ A+ +W CL+ AC N+++GE VA +L ++EP YV L N+Y +W+
Sbjct: 1117 IDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAAN 1176
Query: 449 IRAVMKHRNLAKIPAYS 465
+RA MK R L K P S
Sbjct: 1177 LRASMKGRGLKKSPGCS 1193
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 171/345 (49%), Gaps = 11/345 (3%)
Query: 105 ALDIYIFMSRAGVLP-DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
AL +Y M +AG P D +T+ +L + + + GR +H+ ++ ++SN +S +
Sbjct: 734 ALGLYNKM-KAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALL 792
Query: 164 SLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDV 223
++Y K G E A VF ER + +W ++IAG Q+ R K+A+D+F ++K G + D
Sbjct: 793 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 852
Query: 224 TMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW 283
M SV SA L ++EL +H F +K +SD + SL+DMY K G + A VF
Sbjct: 853 VMTSVISAGLGLENVELGHLIHG--FAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFS 910
Query: 284 EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQE 343
+ N+ +W SMI Y+ NGL +++ + + G + V+ VL A + +
Sbjct: 911 SMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLK 970
Query: 344 GK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
GK H +++ QI ++D+ + G L+ A+ + E MP + N+V W ++
Sbjct: 971 GKTLHAYQIR---LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMIA 1026
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEE 445
GN + + K ++ E D ++ L + G+ EE
Sbjct: 1027 GYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEE 1071
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 155/323 (47%), Gaps = 8/323 (2%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEI 139
L + S WN +I + +K+L++Y + A L+
Sbjct: 608 LENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDF 667
Query: 140 GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
GRQ+H +++ + + + + +++Y+K+G E A+KVFD+ ++++ NA+I+
Sbjct: 668 GRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIG 727
Query: 200 DGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
+GRA +A+ ++ +K D T+ S+ S C +G + VH V +K +S+
Sbjct: 728 NGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEV--IKRSMQSNV 785
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
+ ++L+ MY KCG + A VF+ + + +V +W SMI G+ N +ALD F M +
Sbjct: 786 AIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKE 845
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
G++ + V+SA + V+ G H F + + +E +VD+ + G
Sbjct: 846 GVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRG---LESDVFVACSLVDMYSKFGFA 902
Query: 378 EEARAMVEGMPMKANVVIWGCLM 400
E A + MP K N+V W ++
Sbjct: 903 ESAEMVFSSMPNK-NLVAWNSMI 924
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 145/291 (49%), Gaps = 15/291 (5%)
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFI 163
+AL+++ + + +T P +LK L L GR +H+ V +GL+S+ + + I
Sbjct: 424 QALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLI 483
Query: 164 SLYSKAGDFEKARKVFDENPERK-----LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF 218
++Y K G A +VFD+ E + + WN +I G + G +E + F +++ G
Sbjct: 484 NMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGI 543
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
PD ++ V C L Q+H Y+ +++ + D + +LI MY C R A
Sbjct: 544 RPDGYSLSIVLGICNRLSWYMAGRQIHGYI--IRNMFEGDPYLETALIGMYSSCSRPMEA 601
Query: 279 YKVFWEID-QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
+ +F +++ + N+ +W MI G+ NG+ ++L+ + + + +F G +AC H
Sbjct: 602 WSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSH 661
Query: 338 GGKVQEGKHFF-EMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVE 385
G + G+ +++K +Q +P Y C ++ + ++G +E+A+ + +
Sbjct: 662 GEVLDFGRQVHCDVIKMNFQDDP----YVCTSLLTMYAKSGSVEDAKKVFD 708
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 176/398 (44%), Gaps = 17/398 (4%)
Query: 16 KSSHPLLHRLCKTHTFRKH-VTISAASSFLDTHEDPAKIVATQL----SKCTNLLQLNQI 70
K + P L + C + + H TI A+ + DP +AT L KC L Q+
Sbjct: 441 KFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDP--YIATSLINMYVKCGLLGSALQV 498
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
+ + + S WN +I Y + ++ L + M G+ PD Y+L IVL
Sbjct: 499 FDKMSESR--DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGI 556
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER-KLGS 189
+L GRQ+H +R E + + E+ I +YS +A +F + R + +
Sbjct: 557 CNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVA 616
Query: 190 WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVF 249
WN +I G ++G +++++++ K + + +AC L+ QVH V
Sbjct: 617 WNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDV- 675
Query: 250 QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEA 309
+K + D + SL+ MY K G ++ A KVF ++ V +MI + NG A +A
Sbjct: 676 -IKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDA 734
Query: 310 LDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMV 368
L ++ M+ + T +LS C G G+ E++K ++ A ++
Sbjct: 735 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR--SMQSNVAIQSALL 792
Query: 369 DLLGRAGLLEEARAMVEGMPMKANVVIWGCLM-GACEK 405
+ + G E+A ++ M + +VV WG ++ G C+
Sbjct: 793 TMYYKCGSTEDADSVFYTMKER-DVVAWGSMIAGFCQN 829
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 15/227 (6%)
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I L Q G+ +A+++ T S+ C SL +L +H + V
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASI--VTM 470
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQ-----PNVSSWTSMIVGYAANGLANE 308
+SD + SLI+MY KCG + A +VF ++ + P+++ W +I GY G E
Sbjct: 471 GLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEE 530
Query: 309 ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCM 367
L F M+E GIRP+ + VL C G+ +++N+++ +P +
Sbjct: 531 GLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLET--AL 588
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
+ + EA ++ + ++N+V W ++G G V+ G W
Sbjct: 589 IGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIG-----GFVENGMW 630
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 218/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II + AL ++ M +GV PD TL + A Q + LH +
Sbjct: 238 WNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVM 297
Query: 149 RLGLESNEFCE-SGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G + ++ + + +Y+K + E A+++FD P + SWN +I G Q+G A EA+
Sbjct: 298 RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357
Query: 208 DMFIGLKKC-GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ + ++K G + T VSV A LG L+ +++H +K D + LI
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMH--ALSIKIGLNVDVYVGTCLI 415
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+Y KCG++ A +F ++ + + W ++I G +G EAL F M++ GI+P+HV
Sbjct: 416 DLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHV 475
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +L+AC H G V +G+ FF++M+ Y I P HY CM D+LGRAG L+EA ++
Sbjct: 476 TFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQN 535
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP+K + +WG L+GAC GNV+MG+ +++L EL+P + G YV++SN+YA G W+ V
Sbjct: 536 MPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGV 595
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ +R++++ +NL K P +S
Sbjct: 596 DEVRSLVRRQNLQKTPGWS 614
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 183/369 (49%), Gaps = 13/369 (3%)
Query: 90 NNIIRLYTRLEAPKKALDI--YIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
N +I ++R P+ A + +I PD +T P +++A+ + QLH+ A
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNAS---AAQLHACA 93
Query: 148 VRLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
+RLGL + F + Y + G +A KVFDE ER + +WNA+++GL ++ RA EA
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+ +F + G D VT+ SV C LGD LAL +H V+ VK + + N+LI
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMH--VYAVKHGLDKELFVCNALI 211
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
D+YGK G ++ A VF ++ ++ +W S+I G G AL F MR SG+ P+ +
Sbjct: 212 DVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVL 271
Query: 327 TFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T V + SA GG + K +M+ + ++ A +VD+ + +E A+ M +
Sbjct: 272 TLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAG-NAIVDMYAKLSNIEAAQRMFD 330
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWS--DGAYVVLSNIYASRGLW 443
MP++ + V W L+ + G H+Q+ E G +V + Y+ G
Sbjct: 331 SMPVQ-DSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGAL 389
Query: 444 EEVERIRAV 452
++ R+ A+
Sbjct: 390 QQGMRMHAL 398
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 158/315 (50%), Gaps = 9/315 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ R +A+ ++ M GV D T+ VL L + +H AV
Sbjct: 137 WNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAV 196
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GL+ F + I +Y K G E+A+ VF R L +WN+II+G Q G+ A+
Sbjct: 197 KHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALK 256
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF G++ G PD +T+VS+ SA GD A +H YV + + D + N+++DM
Sbjct: 257 MFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMR-RGWDVDDIIAGNAIVDM 315
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF-HYMRESGIRPNHVT 327
Y K ++ A ++F + + SW ++I GY NGLANEA++ + H + G++ T
Sbjct: 316 YAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGT 375
Query: 328 FVGVLSACVHGGKVQEGKHFFEM-MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
FV VL A H G +Q+G + +K ++ C++DL + G L EA + E
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVG--TCLIDLYAKCGKLAEAMLLFEK 433
Query: 387 MPMKA----NVVIWG 397
MP ++ N +I G
Sbjct: 434 MPRRSTGPWNAIISG 448
>gi|449442521|ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 214/384 (55%), Gaps = 5/384 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +II ++L K+AL ++ M+ V P+ TL L A L L++G+ +H L +
Sbjct: 132 WTSIISGLSKLGFEKEALSKFLSMN---VRPNSTTLVTALSACSSLRCLKLGKAIHGLRM 188
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R E N E+ + Y + A +F++ P+R + SW +I G +Q G +EA+
Sbjct: 189 RTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMIGGYAQSGLCEEAVR 248
Query: 209 MFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + G P++ T+V+V SAC S+ L L VH Y+ + D + N+LI+
Sbjct: 249 VFQNMVHVGEAIPNEATLVNVLSACSSISALHLGQWVHSYI-NSRHDVIIDGNVGNALIN 307
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG M++A +F I+ ++ SW+++I G A NGL +A F M G+ P+ +T
Sbjct: 308 MYVKCGNMEMAILIFKAIEHKDIVSWSTIISGLAMNGLGKQAFVLFSLMLVHGVSPDDIT 367
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+G+LSAC HGG + +G FE MK+VY I P+ HY CMVD+ G+AGLL+EA A ++ M
Sbjct: 368 FLGLLSACSHGGLINQGMMVFEAMKDVYNISPQMRHYACMVDMYGKAGLLDEAEAFIKEM 427
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+A +WG L+ AC+ GN K E V + L + + G + +LSN YA W +
Sbjct: 428 PMEAEGPVWGALLHACQLHGNEKKYEKVREWLLGSKGVTVGTFALLSNTYACCDRWNDAN 487
Query: 448 RIRAVMKHRNLAKIPAYSLATRLD 471
+R M+ R L K+ S +D
Sbjct: 488 DVRVAMRSRGLKKMAGRSWIEMVD 511
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 141/279 (50%), Gaps = 12/279 (4%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
L ++ Q QI+A ++ H + N ++ P+ L +Y M R
Sbjct: 6 LKPSISIAQFTQIHAKLLTNPKPHIF------NPLLGSLVNSIFPENGLFLYNQMLRYPS 59
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARK 177
+ +T LKA C L + G ++H+ ++ G S+ F ++ + Y GD A
Sbjct: 60 SHNHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASL 119
Query: 178 VFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+FD P+ + SW +II+GLS+ G KEA+ F+ + P+ T+V+ SAC SL
Sbjct: 120 IFDSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMN---VRPNSTTLVTALSACSSLRC 176
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
L+L +H ++++ + + ++ N+L+D Y +C + A +F ++ + +V SWT+MI
Sbjct: 177 LKLGKAIHG--LRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDVVSWTTMI 234
Query: 298 VGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVLSAC 335
GYA +GL EA+ F M G PN T V VLSAC
Sbjct: 235 GGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSAC 273
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 211/381 (55%), Gaps = 35/381 (9%)
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G++P +TL L A C AL GR LH+ A +L L + + + + +Y++ GD + A
Sbjct: 128 GLIPTSHTLSSSLPA-CHGLAL--GRALHAYAFKLALAGDSYVATALLGMYARGGDADAA 184
Query: 176 RKVFDENPE-------------RKLGS------------------WNAIIAGLSQDGRAK 204
R +FDE P+ K+G+ WNA+I G +Q GR
Sbjct: 185 RALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPN 244
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F + + G +PD+V ++ SA LG E +H YV + Q + + +
Sbjct: 245 EALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQL-NARVGTA 303
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG ++ A VF I ++ W +MI GYA +G + +AL+ F +R G+ P
Sbjct: 304 LIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPT 363
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+G+L+AC H G V EG FF+ M+ Y I P+ HYGCMVDLLGRAGL+EEA +V
Sbjct: 364 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 423
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ M + + V+W L+ AC N+ +G+ +A +L + G Y++LSNIYA+ G WE
Sbjct: 424 QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWE 483
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
EV R+R++MK + K P S
Sbjct: 484 EVARVRSMMKASGIQKEPGCS 504
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 36/248 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS-LA 147
WN +I YT+ P +AL ++ +M R+GV PD + + L A QL E GR LHS +
Sbjct: 230 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK 289
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ N + I +Y K G E A VF+ ++ + WNA+I G + G +++A+
Sbjct: 290 NSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKAL 349
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+MF L+ G P D+T + + +AC G L + H++ FQ
Sbjct: 350 EMFSQLRSQGLWPTDITFIGLLNACSHSG---LVDEGHQF-FQ----------------- 388
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M+ Y + P + + M+ GL EA FH ++ I P+ V
Sbjct: 389 ------SMEEEYAIV-----PKIEHYGCMVDLLGRAGLIEEA---FHLVQSMTIAPDTVM 434
Query: 328 FVGVLSAC 335
+V +L+AC
Sbjct: 435 WVSLLAAC 442
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 211/381 (55%), Gaps = 35/381 (9%)
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
G++P +TL L A C AL GR LH+ A +L L + + + + +Y++ GD + A
Sbjct: 127 GLIPTSHTLSSSLPA-CHGLAL--GRALHAYAFKLALAGDSYVATALLGMYARGGDADAA 183
Query: 176 RKVFDENPE-------------RKLGS------------------WNAIIAGLSQDGRAK 204
R +FDE P+ K+G+ WNA+I G +Q GR
Sbjct: 184 RALFDEMPDPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPN 243
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ +F + + G +PD+V ++ SA LG E +H YV + Q + + +
Sbjct: 244 EALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQL-NARVGTA 302
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG ++ A VF I ++ W +MI GYA +G + +AL+ F +R G+ P
Sbjct: 303 LIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQGLWPT 362
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
+TF+G+L+AC H G V EG FF+ M+ Y I P+ HYGCMVDLLGRAGL+EEA +V
Sbjct: 363 DITFIGLLNACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLV 422
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ M + + V+W L+ AC N+ +G+ +A +L + G Y++LSNIYA+ G WE
Sbjct: 423 QSMTIAPDTVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWE 482
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
EV R+R++MK + K P S
Sbjct: 483 EVARVRSMMKASGIQKEPGCS 503
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 115/248 (46%), Gaps = 36/248 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS-LA 147
WN +I YT+ P +AL ++ +M R+GV PD + + L A QL E GR LHS +
Sbjct: 229 WNAMIDGYTQHGRPNEALRLFRWMLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK 288
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
++ N + I +Y K G E A VF+ ++ + WNA+I G + G +++A+
Sbjct: 289 NSRRVQLNARVGTALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKAL 348
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+MF L+ G P D+T + + +AC G L + H++ FQ
Sbjct: 349 EMFSQLRSQGLWPTDITFIGLLNACSHSG---LVDEGHQF-FQ----------------- 387
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
M+ Y + P + + M+ GL EA FH ++ I P+ V
Sbjct: 388 ------SMEEEYAIV-----PKIEHYGCMVDLLGRAGLIEEA---FHLVQSMTIAPDTVM 433
Query: 328 FVGVLSAC 335
+V +L+AC
Sbjct: 434 WVSLLAAC 441
>gi|326528345|dbj|BAJ93354.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 609
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/380 (37%), Positives = 220/380 (57%), Gaps = 10/380 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W ++I + +P +AL ++ M V PD L VLKA +L L + HSL V
Sbjct: 182 WTSLISRLVQSGSPLQALRLFAAMMCCDVRPDFVLLVTVLKAYMELDDLPGAQSAHSLVV 241
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGS--WNAIIAGLSQDGRAKEA 206
+ G + + + ++Y+K G AR +FD P ++ WNA+I+G S++G A EA
Sbjct: 242 KGGFDDEQDVVTTLTAMYAKFGCIVAARALFDRIPPPRVNVILWNAMISGYSKNGLASEA 301
Query: 207 IDMFIGLK--KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
+ +F ++ PD VT+ SV AC LG ELA+ + YV +S+ + D L+ +
Sbjct: 302 VHLFKQMQVFARSMSPDSVTLRSVIMACAQLGSTELAVWMEDYVR--RSECREDVLVNTA 359
Query: 265 LIDMYGKCGRMDLAYKVFWEI--DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
LIDMY K G + A +VF ++ + +V W+++I GY A+G EA+ F M+ +G++
Sbjct: 360 LIDMYAKSGSIAHARRVFEQMHAQERDVVVWSALISGYGAHGHLAEAVGLFEDMKLAGVK 419
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
PN VTF+G+LSAC H G V++G +F MK ++IEPR HY C+VDLL RAG L+ A
Sbjct: 420 PNDVTFLGLLSACNHAGAVEKGWFYFHSMKPDHKIEPRHQHYACVVDLLARAGQLDRAYR 479
Query: 383 MVEGMPMKANVVIWGCLMGACE--KFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
+ MP+K + +WG L+ C+ + N+ M E A+H+ ELE + G YV L+N+YAS
Sbjct: 480 FILDMPIKPEMSVWGALLHGCKVHEHSNMAMAERAAQHIFELEQSNAGHYVQLANMYASA 539
Query: 441 GLWEEVERIRAVMKHRNLAK 460
G+W V +RA M+ R + K
Sbjct: 540 GMWSHVAGVRATMRERGVTK 559
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 165/363 (45%), Gaps = 33/363 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRT--HMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG 116
S C L + + H+ R H+LH+ S RL RL AL Y+ + RAG
Sbjct: 62 SPCLRPLA-HHLLDHVPRPPPHLLHAAS---------RLAFRLRLTSLALRHYLAL-RAG 110
Query: 117 ---VLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFE 173
LP + VLK+ GR H+ +RL F + I +Y GD
Sbjct: 111 HPAFLPPAAAIGDVLKSV-------PGRVAHAHGLRLTDGDTRFLHNSLIPMYFSCGDAG 163
Query: 174 KARKVFD--ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSA 231
+AR+VFD + ER + SW ++I+ L Q G +A+ +F + C PD V +V+V A
Sbjct: 164 RARRVFDGMRDCERDVVSWTSLISRLVQSGSPLQALRLFAAMMCCDVRPDFVLLVTVLKA 223
Query: 232 CGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP--N 289
L DL A H V VK + ++ +L MY K G + A +F I P N
Sbjct: 224 YMELDDLPGAQSAHSLV--VKGGFDDEQDVVTTLTAMYAKFGCIVAARALFDRIPPPRVN 281
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMR--ESGIRPNHVTFVGVLSACVHGGKVQEGKHF 347
V W +MI GY+ NGLA+EA+ F M+ + P+ VT V+ AC G +
Sbjct: 282 VILWNAMISGYSKNGLASEAVHLFKQMQVFARSMSPDSVTLRSVIMACAQLGSTELAVWM 341
Query: 348 FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM-PMKANVVIWGCLMGACEKF 406
+ ++ E + ++D+ ++G + AR + E M + +VV+W L+
Sbjct: 342 EDYVRRSECREDVLVNTA-LIDMYAKSGSIAHARRVFEQMHAQERDVVVWSALISGYGAH 400
Query: 407 GNV 409
G++
Sbjct: 401 GHL 403
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,075,977,736
Number of Sequences: 23463169
Number of extensions: 282979432
Number of successful extensions: 761497
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8028
Number of HSP's successfully gapped in prelim test: 3227
Number of HSP's that attempted gapping in prelim test: 631799
Number of HSP's gapped (non-prelim): 48298
length of query: 471
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 325
effective length of database: 8,933,572,693
effective search space: 2903411125225
effective search space used: 2903411125225
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 79 (35.0 bits)