BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012101
(471 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 580 bits (1495), Expect = e-165, Method: Compositional matrix adjust.
Identities = 267/440 (60%), Positives = 344/440 (78%)
Query: 29 HTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFH 88
H VT S++S + +D K++AT LS CT+L ++ +I+ I R+ +L Y AF
Sbjct: 25 HRLNHFVTTSSSSVTPLSPQDRNKLLATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFL 84
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WNNI+R Y R E+P A+ +Y+ M R+ VLPD Y+LPIV+KA+ Q+ +G++LHS+AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
RLG +EFCESGFI+LY KAG+FE ARKVFDENPERKLGSWNAII GL+ GRA EA++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF+ +K+ G EPDD TMVSVT++CG LGDL LA Q+HK V Q K+++KSD +MLNSLIDM
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCGRMDLA +F E+ Q NV SW+SMIVGYAANG EAL+CF MRE G+RPN +TF
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITF 324
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSACVHGG V+EGK +F MMK+ +++EP +HYGC+VDLL R G L+EA+ +VE MP
Sbjct: 325 VGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMP 384
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
MK NV++WGCLMG CEKFG+V+M EWVA ++ ELEPW+DG YVVL+N+YA RG+W++VER
Sbjct: 385 MKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVER 444
Query: 449 IRAVMKHRNLAKIPAYSLAT 468
+R +MK + +AKIPAYS A+
Sbjct: 445 VRKLMKTKKVAKIPAYSYAS 464
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 233/384 (60%), Gaps = 4/384 (1%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL-PDCYTLPIVLKASCQLFALEIGRQLH 144
F WN +IR Y + A +Y M +G++ PD +T P ++KA + + +G +H
Sbjct: 85 VFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIH 144
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
S+ +R G S + ++ + LY+ GD A KVFD+ PE+ L +WN++I G +++G+ +
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPE 204
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+ ++ + G +PD T+VS+ SAC +G L L +VH Y+ +V + + N
Sbjct: 205 EALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS--NV 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRP 323
L+D+Y +CGR++ A +F E+ N SWTS+IVG A NG EA++ F YM + G+ P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+TFVG+L AC H G V+EG +F M+ Y+IEPR H+GCMVDLL RAG +++A
Sbjct: 323 CEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEY 382
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MPM+ NVVIW L+GAC G+ + E+ + +LEP G YV+LSN+YAS W
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRW 442
Query: 444 EEVERIRAVMKHRNLAKIPAYSLA 467
+V++IR M + K+P +SL
Sbjct: 443 SDVQKIRKQMLRDGVKKVPGHSLV 466
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 275 MDLAYKVFWEIDQP-NVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVTFVGVL 332
M A+KVF +I++P NV W ++I GYA G + A + MR SG + P+ T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 333 SACVHGGKVQEGK----------------------HFFEMMKNV---YQI-----EPRFA 362
A V+ G+ H + +V Y++ E
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 363 HYGCMVDLLGRAGLLEEARAMVEGMP---MKANVVIWGCLMGACEKFGNVKMGEWVAKHL 419
+ +++ G EEA A+ M +K + L+ AC K G + +G+ V ++
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 420 QELEPWSD-GAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
++ + + VL ++YA G EE + + M +N
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKN 287
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 252/443 (56%), Gaps = 43/443 (9%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC N+ +++ + +++ WN++I + + +ALD++ M + V
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVS-------WNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLG-LESNEFCESGFISLYSKAGDFEKARK 177
PD TL V+ A L A+++G+++H V+ L ++ + F+ +Y+K ++AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 178 VFDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEA 206
+FD P ER + SWNA+IAG +Q+G +EA
Sbjct: 311 IFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEA 370
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV----FQVKSKQKSDTLML 262
+ +F LK+ P + ++ AC L +L L +Q H +V F+ +S ++ D +
Sbjct: 371 LSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVG 430
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
NSLIDMY KCG ++ Y VF ++ + + SW +MI+G+A NG NEAL+ F M ESG +
Sbjct: 431 NSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEK 490
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+H+T +GVLSAC H G V+EG+H+F M + + P HY CMVDLLGRAG LEEA++
Sbjct: 491 PDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKS 550
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
M+E MPM+ + VIWG L+ AC+ N+ +G++VA+ L E+EP + G YV+LSN+YA G
Sbjct: 551 MIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGK 610
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
WE+V +R M+ + K P S
Sbjct: 611 WEDVMNVRKSMRKEGVTKQPGCS 633
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%), Gaps = 44/351 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+++ + + + ++AL + M + G + + Y+ VL A L + G Q+HSL
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ S+ + S + +YSK G+ A++VFDE +R + SWN++I Q+G A EA+D
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + EPD+VT+ SV SAC SL +++ +VH V + K ++D ++ N+ +DM
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK-NDKLRNDIILSNAFVDM 298
Query: 269 YGKCGRMDLAYKV-------------------------------FWEIDQPNVSSWTSMI 297
Y KC R+ A + F ++ + NV SW ++I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG--------KHFFE 349
GY NG EAL F ++ + P H +F +L AC ++ G KH F+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
E ++D+ + G +EE + M M+ + V W ++
Sbjct: 419 FQSGE---EDDIFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 147/301 (48%), Gaps = 39/301 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER-------------KL 187
R +H+ ++ G + F ++ I YSK G E R+VFD+ P+R KL
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 188 G------------------SWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVT 229
G +WN++++G +Q R +EA+ F + K GF ++ + SV
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVL 159
Query: 230 SACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN 289
SAC L D+ +QVH + KS SD + ++L+DMY KCG ++ A +VF E+ N
Sbjct: 160 SACSGLNDMNKGVQVHSLI--AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 290 VSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFE 349
V SW S+I + NG A EALD F M ES + P+ VT V+SAC ++ G+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 350 MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVV-----IWGCLMGACE 404
+ ++ VD+ + ++EAR + + MP++ NV+ I G M A
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR-NVIAETSMISGYAMAAST 336
Query: 405 K 405
K
Sbjct: 337 K 337
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 249/444 (56%), Gaps = 52/444 (11%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIF---MSRAGVLPDCYTLPIV 127
YAH I M F WN IIR ++ + K + I +F MS V P+ +T P V
Sbjct: 77 YAHKIFNQM--PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS-------------------- 167
LKA + ++ G+Q+H LA++ G +EF S + +Y
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 168 -------------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGR 202
+ GD + AR +FD+ +R + SWN +I+G S +G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 203 AKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLML 262
K+A+++F +KK P+ VT+VSV A LG LEL +H Y S + D ++
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA--EDSGIRIDDVLG 312
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
++LIDMY KCG ++ A VF + + NV +W++MI G+A +G A +A+DCF MR++G+R
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ V ++ +L+AC HGG V+EG+ +F M +V +EPR HYGCMVDLLGR+GLL+EA
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
+ MP+K + VIW L+GAC GNV+MG+ VA L ++ P GAYV LSN+YAS+G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 443 WEEVERIRAVMKHRNLAKIPAYSL 466
W EV +R MK +++ K P SL
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSL 516
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 298 bits (764), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 242/423 (57%), Gaps = 37/423 (8%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFM--SRAGVLPDCYTLPIVL 128
YA+++ T + H F WN IIR ++R P+ A+ I+I M S V P T P V
Sbjct: 76 YAYLVFTRINHK--NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 129 KASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY---------------------- 166
KA +L GRQLH + ++ GLE + F + + +Y
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 167 ---------SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCG 217
+K G ++A+ +FDE P+R SWN++I+G ++GR K+A+DMF +++
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 218 FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDL 277
+PD TMVS+ +AC LG E +H+Y+ V+++ + +++++ +LIDMY KCG ++
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYI--VRNRFELNSIVVTALIDMYCKCGCIEE 311
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
VF + +S W SMI+G A NG A+D F + SG+ P+ V+F+GVL+AC H
Sbjct: 312 GLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G+V FF +MK Y IEP HY MV++LG AGLLEEA A+++ MP++ + VIW
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 398 CLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRN 457
L+ AC K GNV+M + AK L++L+P YV+LSN YAS GL+EE R +MK R
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 458 LAK 460
+ K
Sbjct: 492 MEK 494
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLY-SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQ 199
+Q+H+ ++ GL S+ S ++ + D A VF + WN II G S+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 200 DGRAKEAIDMFIGL--KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ AI +FI + +P +T SV A G LG Q+H V +K +
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV--IKEGLED 159
Query: 258 DTLMLNSLIDMY-------------------------------GKCGRMDLAYKVFWEID 286
D+ + N+++ MY KCG +D A +F E+
Sbjct: 160 DSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
Q N SW SMI G+ NG +ALD F M+E ++P+ T V +L+AC + G ++G+
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 347 FFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
E +++N +++ ++D+ + G +EE + E P K
Sbjct: 280 IHEYIVRNRFELNSIVVT--ALIDMYCKCGCIEEGLNVFECAPKK 322
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 290 bits (742), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/467 (34%), Positives = 259/467 (55%), Gaps = 43/467 (9%)
Query: 30 TFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLH-------- 81
TF KH I ++ ++P ++ SKC +L +L QI A+ I++H+
Sbjct: 17 TFTKHSKIDTVNT-----QNPILLI----SKCNSLRELMQIQAYAIKSHIEDVSFVAKLI 67
Query: 82 ----------SYSAAFH------------WNNIIRLYTRLEAPKKALDIYIFMSRAGVLP 119
S S A H +N++ R Y+R P + +++ + G+LP
Sbjct: 68 NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILP 127
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D YT P +LKA ALE GRQLH L+++LGL+ N + I++Y++ D + AR VF
Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVF 187
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
D E + +NA+I G ++ R EA+ +F ++ +P+++T++SV S+C LG L+
Sbjct: 188 DRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLD 247
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L +HKY K + +N+ LIDM+ KCG +D A +F ++ + +W++MIV
Sbjct: 248 LGKWIHKYA---KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
YA +G A +++ F MR ++P+ +TF+G+L+AC H G+V+EG+ +F M + + I
Sbjct: 305 AYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIV 364
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
P HYG MVDLL RAG LE+A ++ +P+ ++W L+ AC N+ + E V++
Sbjct: 365 PSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSER 424
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ EL+ G YV+LSN+YA WE V+ +R VMK R K+P S
Sbjct: 425 IFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 287 bits (735), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 224/377 (59%), Gaps = 7/377 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + +KAL++ + M R V P+ YT VL+ SC + R LH +
Sbjct: 130 WTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR-SCN--GMSDVRMLHCGII 186
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES+ F S I +++K G+ E A VFDE WN+II G +Q+ R+ A++
Sbjct: 187 KEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALE 246
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +K+ GF + T+ SV AC L LEL +Q H ++ K D ++ N+L+DM
Sbjct: 247 LFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV----KYDQDLILNNALVDM 302
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A +VF ++ + +V +W++MI G A NG + EAL F M+ SG +PN++T
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVL AC H G +++G ++F MK +Y I+P HYGCM+DLLG+AG L++A ++ M
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 422
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + V W L+GAC N+ + E+ AK + L+P G Y +LSNIYA+ W+ VE
Sbjct: 423 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 482
Query: 449 IRAVMKHRNLAKIPAYS 465
IR M+ R + K P S
Sbjct: 483 IRTRMRDRGIKKEPGCS 499
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 118/216 (54%), Gaps = 10/216 (4%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN+II + + AL+++ M RAG + + TL VL+A L LE+G Q H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ + + + + +Y K G E A +VF++ ER + +W+ +I+GL+Q+G ++E
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE---LALQVHKYVFQVKSKQKSDTLML 262
A+ +F +K G +P+ +T+V V AC G LE + K ++ + ++
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH----Y 398
Query: 263 NSLIDMYGKCGRMDLAYKVFWEID-QPNVSSWTSMI 297
+ID+ GK G++D A K+ E++ +P+ +W +++
Sbjct: 399 GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 121/251 (48%), Gaps = 9/251 (3%)
Query: 157 FCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKC 216
F + I++Y K A ++FD+ P+R + SW +I+ S+ ++A+++ + + +
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 217 GFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMD 276
P+ T SV +C + D+ + +H + +K +SD + ++LID++ K G +
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRM---LHCGI--IKEGLESDVFVRSALIDVFAKLGEPE 211
Query: 277 LAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACV 336
A VF E+ + W S+I G+A N ++ AL+ F M+ +G T VL AC
Sbjct: 212 DALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT 271
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
++ G + ++ + + +VD+ + G LE+A + M + +V+ W
Sbjct: 272 GLALLELG---MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER-DVITW 327
Query: 397 GCLMGACEKFG 407
++ + G
Sbjct: 328 STMISGLAQNG 338
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 31/177 (17%)
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
++N LI+MY K ++ A+++F ++ Q NV SWT+MI Y+ + +AL+ M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 320 GIRPNHVTFVGVLSAC--------VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLL 371
+RPN T+ VL +C +H G ++EG +E ++D+
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEG------------LESDVFVRSALIDVF 204
Query: 372 GRAGLLEEARAMVEGMPMKANVVIWGCLMG----------ACEKFGNVKMGEWVAKH 418
+ G E+A ++ + M + + ++W ++G A E F +K ++A+
Sbjct: 205 AKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 230/377 (61%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y K+AL+++ M + V PD T+ V+ A Q ++E+GRQ+H
Sbjct: 234 WNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWID 293
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G SN + I LYSK G+ E A +F+ P + + SWN +I G + KEA+
Sbjct: 294 DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALL 353
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + + G P+DVTM+S+ AC LG +++ +H Y+ + + + + SLIDM
Sbjct: 354 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDM 413
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG ++ A++VF I ++SSW +MI G+A +G A+ + D F MR+ GI+P+ +TF
Sbjct: 414 YAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITF 473
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VG+LSAC H G + G+H F M Y++ P+ HYGCM+DLLG +GL +EA M+ M
Sbjct: 474 VGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMME 533
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+ + VIW L+ AC+ GNV++GE A++L ++EP + G+YV+LSNIYAS G W EV +
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAK 593
Query: 449 IRAVMKHRNLAKIPAYS 465
RA++ + + K+P S
Sbjct: 594 TRALLNDKGMKKVPGCS 610
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 174/349 (49%), Gaps = 40/349 (11%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN + R + P AL +Y+ M G+LP+ YT P VLK+ + A + G+Q+H +
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER----------------------- 185
+LG + + + + IS+Y + G E A KVFD++P R
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 186 --------KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD 237
+ SWNA+I+G ++ G KEA+++F + K PD+ TMV+V SAC G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+EL QVH ++ S+ ++N+LID+Y KCG ++ A +F + +V SW ++I
Sbjct: 282 IELGRQVHLWIDD--HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVY 355
GY L EAL F M SG PN VT + +L AC H G + G+ H + + K +
Sbjct: 340 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKRLK 398
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKA----NVVIWGCLM 400
+ + ++D+ + G +E A + + K+ N +I+G M
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 147/314 (46%), Gaps = 44/314 (14%)
Query: 83 YSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQ 142
Y WN +I YT + K+AL ++ M R+G P+ T+ +L A L A++IGR
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 143 LHS-LAVRL-GLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+H + RL G+ + + I +Y+K GD E A +VF+ + L SWNA+I G +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMH 448
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
GRA + D+F ++K G +PDD+T V + SAC G L+L +++F+ ++
Sbjct: 449 GRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG----RHIFRTMTQD----- 499
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
YK+ P + + MI +GL EA + +
Sbjct: 500 ------------------YKM-----TPKLEHYGCMIDLLGHSGLFKEAEE---MINMME 533
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRF-AHYGCMVDLLGRAGLLEE 379
+ P+ V + +L AC G V+ G+ F E N+ +IEP Y + ++ AG E
Sbjct: 534 MEPDGVIWCSLLKACKMHGNVELGESFAE---NLIKIEPENPGSYVLLSNIYASAGRWNE 590
Query: 380 ---ARAMVEGMPMK 390
RA++ MK
Sbjct: 591 VAKTRALLNDKGMK 604
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK---ARKVFDENPERKLGSWNAIIAGL 197
R +H+ +++GL + + S I + FE A VF E L WN + G
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
+ A+ +++ + G P+ T V +C + Q+H +V ++
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDL-- 167
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFW-------------------------------EID 286
D + SLI MY + GR++ A+KVF EI
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+V SW +MI GYA G EAL+ F M ++ +RP+ T V V+SAC G ++ G+
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+ + + ++DL + G LE A + E +P K +V+ W L+G
Sbjct: 288 VHLWIDD-HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 278 AYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVH 337
A VF I +PN+ W +M G+A + AL + M G+ PN TF VL +C
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 338 GGKVQEGK----HFFEM---------------------MKNVYQIEPRFAH-----YGCM 367
+EG+ H ++ +++ +++ + H Y +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ G +E A+ + + +P+K +VV W ++ + GN K
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVK-DVVSWNAMISGYAETGNYK 248
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 227/424 (53%), Gaps = 8/424 (1%)
Query: 44 LDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPK 103
+D A + KC +L ++ I R WN++ + Y+
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD-----RTVVSWNSMFKAYSVFGEAF 238
Query: 104 KALDIYIFMSRAGVLPDCYTLPIVLKASCQ-LFALEIGRQLHSLAVRLGLESNEFCESGF 162
A +Y M R PD T I L ASCQ L GR +HS A+ LG + + + F
Sbjct: 239 DAFGLYCLMLREEFKPDLSTF-INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTF 297
Query: 163 ISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDD 222
IS+YSK+ D AR +FD R SW +I+G ++ G EA+ +F + K G +PD
Sbjct: 298 ISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDL 357
Query: 223 VTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVF 282
VT++S+ S CG G LE + + ++ + ++ N+LIDMY KCG + A +F
Sbjct: 358 VTLLSLISGCGKFGSLETGKWIDARA-DIYGCKRDNVMICNALIDMYSKCGSIHEARDIF 416
Query: 283 WEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQ 342
+ V +WT+MI GYA NG+ EAL F M + +PNH+TF+ VL AC H G ++
Sbjct: 417 DNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLE 476
Query: 343 EGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGA 402
+G +F +MK VY I P HY CMVDLLGR G LEEA ++ M K + IWG L+ A
Sbjct: 477 KGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNA 536
Query: 403 CEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIP 462
C+ NVK+ E A+ L LEP YV ++NIYA+ G+W+ RIR++MK RN+ K P
Sbjct: 537 CKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYP 596
Query: 463 AYSL 466
S+
Sbjct: 597 GESV 600
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 158/329 (48%), Gaps = 25/329 (7%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
A WN ++ + + KA ++ M + PD T+ +++++ +L++ +H+
Sbjct: 118 ATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRA 203
+ +RLG++ + +IS Y K GD + A+ VF+ + +R + SWN++ S G A
Sbjct: 178 VGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA 237
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+A ++ + + F+PD T +++ ++C + L +H + + + Q D +N
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ--DIEAIN 295
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+ I MY K A +F + SWT MI GYA G +EAL FH M +SG +P
Sbjct: 296 TFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKP 355
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC----------MVDLLGR 373
+ VT + ++S C G ++ GK I+ R YGC ++D+ +
Sbjct: 356 DLVTLLSLISGCGKFGSLETGK----------WIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G + EAR + + P K VV W ++
Sbjct: 406 CGSIHEARDIFDNTPEK-TVVTWTTMIAG 433
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 165/375 (44%), Gaps = 37/375 (9%)
Query: 76 RTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
R + + S+ WN IR P ++L ++ M R G P+ +T P V KA +L
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+ +H+ ++ S+ F + + ++ K + A KVF+ PER +WNA+++
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
G Q G +A +F ++ PD VT++++ + L+L +H ++
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMH--AVGIRLGV 184
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPN--VSSWTSMIVGYAANGLANEALDCF 313
+ N+ I YGKCG +D A VF ID+ + V SW SM Y+ G A +A +
Sbjct: 185 DVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGK----HFFEMM--KNVYQIEPRFAHYG-- 365
M +P+ TF+ + ++C + + +G+ H + +++ I + Y
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKS 304
Query: 366 ---CMVDLL-------------------GRAGLLEEARAMVEGM---PMKANVVIWGCLM 400
C LL G ++EA A+ M K ++V L+
Sbjct: 305 EDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLI 364
Query: 401 GACEKFGNVKMGEWV 415
C KFG+++ G+W+
Sbjct: 365 SGCGKFGSLETGKWI 379
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
R+++ + + +WN I E++ +F +K+ GFEP++ T V AC L
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
D+ VH ++ +KS SD + + +DM+ KC +D A KVF + + + ++W +
Sbjct: 66 ADVGCCEMVHAHL--IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV- 354
M+ G+ +G ++A F MR + I P+ VT + + + ++ E M V
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTL----IQSASFEKSLKLLEAMHAVG 179
Query: 355 --YQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPM-KANVVIWGCLMGACEKFG 407
++ + + G+ G L+ A+ + E + VV W + A FG
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 235/413 (56%), Gaps = 34/413 (8%)
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV-LPDCYTLPIVLKASCQLFALEIGRQLH 144
F +N+IIR YT + IY + R LPD +T P + K+ L + +G+Q+H
Sbjct: 73 VFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ G + E+ I +Y K D A KVFDE ER + SWN++++G ++ G+ K
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMK 192
Query: 205 -------------------------------EAIDMFIGLKKCGFEPDDVTMVSVTSACG 233
EA+D F ++ G EPD+++++SV +C
Sbjct: 193 KAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCA 252
Query: 234 SLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG LEL +H Y + ++ T + N+LI+MY KCG + A ++F +++ +V SW
Sbjct: 253 QLGSLELGKWIHLYAERRGFLKQ--TGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISW 310
Query: 294 TSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
++MI GYA +G A+ A++ F+ M+ + ++PN +TF+G+LSAC H G QEG +F+MM+
Sbjct: 311 STMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
YQIEP+ HYGC++D+L RAG LE A + + MPMK + IWG L+ +C GN+ +
Sbjct: 371 DYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVAL 430
Query: 414 WVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
HL ELEP G YV+L+NIYA G WE+V R+R ++++ N+ K P SL
Sbjct: 431 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSL 483
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 151/348 (43%), Gaps = 37/348 (10%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++++ + GL + F + + K D + A ++F++ + +N+II + +
Sbjct: 27 KKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHN 86
Query: 201 GRAKEAIDMFIGLKKCGFE-PDDVTMVSVTSACGSLGDLELALQVHKYV------FQVKS 253
+ I ++ L + FE PD T + +C SLG L QVH ++ F V +
Sbjct: 87 SLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVT 146
Query: 254 KQ-----------------------KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
+ + D + NSL+ Y + G+M A +F + +
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGK--HFF 348
SWT+MI GY G EA+D F M+ +GI P+ ++ + VL +C G ++ GK H +
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266
Query: 349 EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
+ + + ++++ + G++ +A + M K +V+ W ++ GN
Sbjct: 267 AERRGFLK---QTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DVISWSTMISGYAYHGN 322
Query: 409 VKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWEEVERIRAVMKH 455
+Q + +G ++ L + + G+W+E R +M+
Sbjct: 323 AHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQ 370
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 281 bits (719), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 243/435 (55%), Gaps = 37/435 (8%)
Query: 64 LLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYT 123
LL N +YA + H H S F +N +I+ Y P +++ +Y +S G+ P +T
Sbjct: 27 LLIPNLVYARKLFDH--HQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHT 84
Query: 124 LPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDEN- 182
+ AS + R LHS R G ES+ FC + I+ Y+K G AR+VFDE
Sbjct: 85 FNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMS 144
Query: 183 ------------------------------PERKLGSWNAIIAGLSQDGRAKEAIDMFIG 212
P + + SW +I+G SQ+G EA+ MF+
Sbjct: 145 KRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLC 204
Query: 213 LKK-CGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGK 271
++K +P+ +T+VSV AC +LG+LE+ ++ Y + + + + N+ I+MY K
Sbjct: 205 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE--NGFFDNIYVCNATIEMYSK 262
Query: 272 CGRMDLAYKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVG 330
CG +D+A ++F E+ +Q N+ SW SMI A +G +EAL F M G +P+ VTFVG
Sbjct: 263 CGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVG 322
Query: 331 VLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
+L ACVHGG V +G+ F+ M+ V++I P+ HYGCM+DLLGR G L+EA +++ MPMK
Sbjct: 323 LLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMK 382
Query: 391 ANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIR 450
+ V+WG L+GAC GNV++ E ++ L +LEP + G V++SNIYA+ W+ V R+R
Sbjct: 383 PDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMR 442
Query: 451 AVMKHRNLAKIPAYS 465
+MK + K YS
Sbjct: 443 KLMKKETMTKAAGYS 457
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/378 (37%), Positives = 226/378 (59%), Gaps = 3/378 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I + R + +A+ ++ M + GV + T+ VLKA+ ++ + GR +H L +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
G ++ + F S + +Y K ++ A+KVFDE P R + +W A+IAG Q + +
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGM 291
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K P++ T+ SV SAC +G L +VH Y+ +K+ + +T +LID
Sbjct: 292 LVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM--IKNSIEINTTAGTTLID 349
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
+Y KCG ++ A VF + + NV +WT+MI G+AA+G A +A D F+ M S + PN VT
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
F+ VLSAC HGG V+EG+ F MK + +EP+ HY CMVDL GR GLLEEA+A++E M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
PM+ V+WG L G+C + ++G++ A + +L+P G Y +L+N+Y+ W+EV
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 448 RIRAVMKHRNLAKIPAYS 465
R+R MK + + K P +S
Sbjct: 530 RVRKQMKDQQVVKSPGFS 547
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 186/373 (49%), Gaps = 16/373 (4%)
Query: 88 HWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR--QLHS 145
H++ I L RL + Y M R GV+P +T P +LKA +F L Q H+
Sbjct: 76 HFSGGITLNRRL-----SFLAYRHMRRNGVIPSRHTFPPLLKA---VFKLRDSNPFQFHA 127
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
V+ GL+S+ F + IS YS +G F+ A ++FD ++ + +W A+I G ++G A E
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ F+ +KK G +++T+VSV A G + D+ VH + + K D + +SL
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET-GRVKCDVFIGSSL 246
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+DMYGKC D A KVF E+ NV +WT++I GY + ++ + F M +S + PN
Sbjct: 247 VDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNE 306
Query: 326 VTFVGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
T VLSAC H G + G+ M+KN IE ++DL + G LEEA +
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKN--SIEINTTAGTTLIDLYVKCGCLEEAILVF 364
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMG-EWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
E + K NV W ++ G + + L ++ ++ + + A GL
Sbjct: 365 ERLHEK-NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLV 423
Query: 444 EEVERIRAVMKHR 456
EE R+ MK R
Sbjct: 424 EEGRRLFLSMKGR 436
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 278 bits (712), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/485 (33%), Positives = 255/485 (52%), Gaps = 46/485 (9%)
Query: 19 HPLLHRLCKTHTFRK----HVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHI 74
HP + L TF++ H + + D H + A LS L NQI
Sbjct: 7 HPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRS 66
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYTLPIVLKASC 132
+ + F N++IR + + P+K+ D Y I S + PD YT+ +++A
Sbjct: 67 EKPTL-------FALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT 119
Query: 133 QLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS------------------------- 167
L E G Q+H + +R G +++ ++G ISLY+
Sbjct: 120 GLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTA 179
Query: 168 ------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPD 221
+ GD ARK+F+ PER +WNA+I+G +Q G ++EA+++F ++ G + +
Sbjct: 180 MVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVN 239
Query: 222 DVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKV 281
V M+SV SAC LG L+ H Y+ ++K K + +L+D+Y KCG M+ A +V
Sbjct: 240 GVAMISVLSACTQLGALDQGRWAHSYI--ERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
Query: 282 FWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKV 341
FW +++ NV +W+S + G A NG + L+ F M++ G+ PN VTFV VL C G V
Sbjct: 298 FWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFV 357
Query: 342 QEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
EG+ F+ M+N + IEP+ HYGC+VDL RAG LE+A ++++ MPMK + +W L+
Sbjct: 358 DEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLH 417
Query: 402 ACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKI 461
A + N+++G +K + ELE + GAYV+LSNIYA W+ V +R MK + + K
Sbjct: 418 ASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQ 477
Query: 462 PAYSL 466
P S+
Sbjct: 478 PGCSV 482
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 152/381 (39%), Positives = 222/381 (58%), Gaps = 4/381 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN + + Y R + P ++L +Y M GV PD +T P V+KA QL G LH+
Sbjct: 75 FLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAH 134
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
V+ G + + +Y K G+ A +F+ + L +WNA +A Q G + A
Sbjct: 135 VVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIA 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
++ F + + D T+VS+ SACG LG LE+ ++ Y K + + ++ N+ +
Sbjct: 195 LEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEI--YDRARKEEIDCNIIVENARL 252
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ KCG + A +F E+ Q NV SW++MIVGYA NG + EAL F M+ G+RPN+V
Sbjct: 253 DMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYV 312
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMM--KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
TF+GVLSAC H G V EGK +F +M N +EPR HY CMVDLLGR+GLLEEA +
Sbjct: 313 TFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFI 372
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
+ MP++ + IWG L+GAC ++ +G+ VA L E P +V+LSNIYA+ G W+
Sbjct: 373 KKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWD 432
Query: 445 EVERIRAVMKHRNLAKIPAYS 465
V+++R+ M+ K+ AYS
Sbjct: 433 CVDKVRSKMRKLGTKKVAAYS 453
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
+++H++ +R G + + GD AR+VFDE + ++ WN + G ++
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
E++ ++ ++ G PD+ T V A LGD +H +V VK +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHV--VKYGFGCLGI 145
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ L+ MY K G + A +F + ++ +W + + G + AL+ F+ M
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
++ + T V +LSAC G ++ G+ ++ + +I+ +D+ + G E A
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 381 RAMVEGMPMKANVVIWGCLM 400
R + E M + NVV W ++
Sbjct: 265 RVLFEEMKQR-NVVSWSTMI 283
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 164/427 (38%), Positives = 235/427 (55%), Gaps = 39/427 (9%)
Query: 75 IRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
I+ H + W + I L TR +A + M+ AGV P+ T I L + C
Sbjct: 25 IQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITF-IALLSGCGD 83
Query: 135 F---ALEIGRQLHSLAVRLGLESNE-FCESGFISLYSKAGDFEKAR-------------- 176
F + +G LH A +LGL+ N + I +YSK G F+KAR
Sbjct: 84 FTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 177 -----------------KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFE 219
K+FD+ PER L SW A+I G + G +EA+ F ++ G +
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 220 PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAY 279
PD V +++ +AC +LG L L VH+YV K++ + NSLID+Y +CG ++ A
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLS--QDFKNNVRVSNSLIDLYCRCGCVEFAR 261
Query: 280 KVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
+VF+ +++ V SW S+IVG+AANG A+E+L F M+E G +P+ VTF G L+AC H G
Sbjct: 262 QVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVG 321
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCL 399
V+EG +F++MK Y+I PR HYGC+VDL RAG LE+A +V+ MPMK N V+ G L
Sbjct: 322 LVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSL 381
Query: 400 MGACEKFG-NVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
+ AC G N+ + E + KHL +L S YV+LSN+YA+ G WE ++R MK L
Sbjct: 382 LAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGL 441
Query: 459 AKIPAYS 465
K P +S
Sbjct: 442 KKQPGFS 448
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 278 bits (711), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 225/389 (57%), Gaps = 16/389 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F +N++I+ ++L P + Y M + V P YT V+K+ L AL IG+ +H
Sbjct: 73 FLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCH 132
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
AV G + + ++ ++ YSK GD E AR+VFD PE+ + +WN++++G Q+G A EA
Sbjct: 133 AVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEA 192
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN--- 263
I +F +++ GFEPD T VS+ SAC G + L VH+Y+ S+ L LN
Sbjct: 193 IQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYII-------SEGLDLNVKL 245
Query: 264 --SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-G 320
+LI++Y +CG + A +VF ++ + NV++WT+MI Y +G +A++ F+ M + G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
PN+VTFV VLSAC H G V+EG+ ++ M Y++ P H+ CMVD+LGRAG L+EA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 381 RAMVEGMPMKANVV---IWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
+ + +W ++GAC+ N +G +AK L LEP + G +V+LSNIY
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
A G +EV IR M NL K YS+
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSV 454
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/470 (32%), Positives = 249/470 (52%), Gaps = 64/470 (13%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHSYSA-------------------------------A 86
L +C+ +L QI+A +++T ++ A
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +IR ++ + P+++L +Y M + + YT P +LKA L A E Q+H+
Sbjct: 81 FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA--- 203
+LG E++ + + I+ Y+ G+F+ A +FD PE SWN++I G + G+
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200
Query: 204 ----------------------------KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
KEA+ +F ++ EPD+V++ + SAC L
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE +H Y+ K++ + D+++ LIDMY KCG M+ A +VF I + +V +WT+
Sbjct: 261 GALEQGKWIHSYL--NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
+I GYA +G EA+ F M++ GI+PN +TF VL+AC + G V+EGK F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
++P HYGC+VDLLGRAGLL+EA+ ++ MP+K N VIWG L+ AC N+++GE +
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ L ++P+ G YV +NI+A W++ R +MK + +AK+P S
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCS 488
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 172/482 (35%), Positives = 256/482 (53%), Gaps = 46/482 (9%)
Query: 28 THTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRT---------- 77
H H+ A+S T + + + + C+++ QL Q++A +RT
Sbjct: 26 VHPLSPHIP-PASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLF 84
Query: 78 ------HMLHSYS---------------AAFHWNNIIRLYTR-LEAPKKALDIYIFM-SR 114
+ S+S ++F WN +IR + ++A +Y M R
Sbjct: 85 LYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLER 144
Query: 115 AGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
PD +T P VLKA +F G+Q+H V+ G + + +G I LY G +
Sbjct: 145 GESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDL 204
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
ARKVFDE PER L SWN++I L + G A+ +F +++ FEPD TM SV SAC
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAG 263
Query: 235 LGDLELALQVHKYVF-QVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG L L H ++ + D L+ NSLI+MY KCG + +A +VF + + +++SW
Sbjct: 264 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 323
Query: 294 TSMIVGYAANGLANEALDCFHYM--RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMM 351
+MI+G+A +G A EA++ F M + +RPN VTFVG+L AC H G V +G+ +F+MM
Sbjct: 324 NAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM 383
Query: 352 KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG-NVK 410
Y IEP HYGC+VDL+ RAG + EA MV MPMK + VIW L+ AC K G +V+
Sbjct: 384 VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Query: 411 MGEWVAKHL---QELEPWSD----GAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPA 463
+ E +A+++ +E S+ GAYV+LS +YAS W +V +R +M + K P
Sbjct: 444 LSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPG 503
Query: 464 YS 465
S
Sbjct: 504 CS 505
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 275 bits (702), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 173/500 (34%), Positives = 266/500 (53%), Gaps = 53/500 (10%)
Query: 8 ISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQL--------- 58
I L++LR K HP L L +F I L TH VA++L
Sbjct: 4 IVLNTLRFK--HPKLALLQSCSSFSDLKIIHGF--LLRTHLISDVFVASRLLALCVDDST 59
Query: 59 -SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGV 117
+K TNLL YA+ I + + + F +N +IR ++ P KA Y M ++ +
Sbjct: 60 FNKPTNLLG----YAYGIFSQIQNP--NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRI 113
Query: 118 LPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYS---------- 167
PD T P ++KAS ++ + +G Q HS VR G +++ + E+ + +Y+
Sbjct: 114 WPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGR 173
Query: 168 ---------------------KAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
K G E AR++FDE P R L +W+ +I G +++ ++A
Sbjct: 174 IFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKA 233
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
ID+F +K+ G ++ MVSV S+C LG LE + ++YV VKS + ++ +L+
Sbjct: 234 IDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV--VKSHMTVNLILGTALV 291
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DM+ +CG ++ A VF + + + SW+S+I G A +G A++A+ F M G P V
Sbjct: 292 DMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDV 351
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TF VLSAC HGG V++G +E MK + IEPR HYGC+VD+LGRAG L EA +
Sbjct: 352 TFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILK 411
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M +K N I G L+GAC+ + N ++ E V L +++P G YV+LSNIYA G W+++
Sbjct: 412 MHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKI 471
Query: 447 ERIRAVMKHRNLAKIPAYSL 466
E +R +MK + + K P +SL
Sbjct: 472 ESLRDMMKEKLVKKPPGWSL 491
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 224/409 (54%), Gaps = 35/409 (8%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFA-LEIGRQLHSLA 147
WN +I Y ++ +KA+ +Y M GV PD T+ I L +SC + L G++ +
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM-IGLVSSCSMLGDLNRGKEFYEYV 283
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW----------------- 190
GL + + ++SK GD +AR++FD +R + SW
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 191 --------------NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
NA+I G Q R ++A+ +F ++ +PD++TM+ SAC LG
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
L++ + +H+Y+ K + + SL+DMY KCG + A VF I N ++T++
Sbjct: 404 ALDVGIWIHRYI--EKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAI 461
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I G A +G A+ A+ F+ M ++GI P+ +TF+G+LSAC HGG +Q G+ +F MK+ +
Sbjct: 462 IGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFN 521
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVA 416
+ P+ HY MVDLLGRAGLLEEA ++E MPM+A+ +WG L+ C GNV++GE A
Sbjct: 522 LNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAA 581
Query: 417 KHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
K L EL+P G YV+L +Y +WE+ +R R +M R + KIP S
Sbjct: 582 KKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCS 630
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 174/356 (48%), Gaps = 38/356 (10%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL---PDCYTLPIVLKASCQLFALEIGRQL 143
F WN IR ++ E PK++ +Y M R G PD +T P++ K L +G +
Sbjct: 119 FSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMI 178
Query: 144 HSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
++L LE + I +++ GD E ARKVFDE+P R L SWN +I G + G A
Sbjct: 179 LGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEA 238
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
++AI ++ ++ G +PDDVTM+ + S+C LGDL + ++YV + + + ++N
Sbjct: 239 EKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE--NGLRMTIPLVN 296
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL------------------ 305
+L+DM+ KCG + A ++F +++ + SWT+MI GYA GL
Sbjct: 297 ALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 306 -------------ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+AL F M+ S +P+ +T + LSAC G + G ++
Sbjct: 357 WNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
Y + A +VD+ + G + EA ++ G+ + N + + ++G G+
Sbjct: 417 K-YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIGGLALHGD 470
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI---RPNHVTFVGV 331
+D + K+ I+ PN+ SW I G++ + E+ + M G RP+H T+ +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 332 LSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH--YGCMVDLLGRAGLLEEARAMVEGMPM 389
C ++ H ++ +V ++ + + + G +E AR + + P+
Sbjct: 163 FKVCA-DLRLSSLGHM--ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPV 219
Query: 390 KANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
+ ++V W CL+ +K G + +V K ++
Sbjct: 220 R-DLVSWNCLINGYKKIGEAEKAIYVYKLME 249
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 273 bits (697), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 221/372 (59%), Gaps = 3/372 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W I+ Y + P +AL+I+ M + V PD L VL A L L+ GR +H+ V
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE ++Y+K G A+ +FD+ L WNA+I+G +++G A+EAID
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF + PD +++ S SAC +G LE A +++YV +S + D + ++LIDM
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVG--RSDYRDDVFISSALIDM 367
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
+ KCG ++ A VF +V W++MIVGY +G A EA+ + M G+ PN VTF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+G+L AC H G V+EG FF M + ++I P+ HY C++DLLGRAG L++A +++ MP
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP 486
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ V +WG L+ AC+K +V++GE+ A+ L ++P + G YV LSN+YA+ LW+ V
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 449 IRAVMKHRNLAK 460
+R MK + L K
Sbjct: 547 VRVRMKEKGLNK 558
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 6/316 (1%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN IIR Y+R + AL +Y M A V PD +T P +LKA L L++GR +H+
Sbjct: 85 FPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQ 144
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFD--ENPERKLGSWNAIIAGLSQDGRAK 204
RLG +++ F ++G I+LY+K AR VF+ PER + SW AI++ +Q+G
Sbjct: 145 VFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPM 204
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EA+++F ++K +PD V +VSV +A L DL+ +H V ++ + + D L+ S
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--S 262
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L MY KCG++ A +F ++ PN+ W +MI GYA NG A EA+D FH M +RP+
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
++ +SAC G +++ + +E + + F ++D+ + G +E AR +V
Sbjct: 323 TISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS-SALIDMFAKCGSVEGAR-LV 380
Query: 385 EGMPMKANVVIWGCLM 400
+ +VV+W ++
Sbjct: 381 FDRTLDRDVVVWSAMI 396
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 271 bits (694), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/447 (34%), Positives = 233/447 (52%), Gaps = 66/447 (14%)
Query: 90 NNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVR 149
N+++R + P+K + +Y M + GV PD YT VLKA +L G H VR
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 150 LGLESNEFCESGFI-------------------------------SLYSKAGDFEKARKV 178
G NE+ ++ I S Y+K G ++A ++
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 179 FDENP-------------------------------ERKLGSWNAIIAGLSQDGRAKEAI 207
FDE P E+ + +WNA+I+G G KEA+
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS---DTLMLNS 264
+F ++ G PD VT++S+ SAC LGDLE ++H Y+ + S S T + N+
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNA 320
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
LIDMY KCG +D A +VF + ++S+W ++IVG A + A +++ F M+ + PN
Sbjct: 321 LIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPN 379
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMV 384
VTF+GV+ AC H G+V EG+ +F +M+++Y IEP HYGCMVD+LGRAG LEEA V
Sbjct: 380 EVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 385 EGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWE 444
E M ++ N ++W L+GAC+ +GNV++G++ + L + G YV+LSNIYAS G W+
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 445 EVERIRAVMKHRNLAKIPAYSLATRLD 471
V+++R + + K SL D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH---- 144
WN +I Y PK+AL I+ M AG PD T+ +L A L LE G++LH
Sbjct: 243 WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYIL 302
Query: 145 -SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRA 203
+ +V + + I +Y+K G ++A +VF +R L +WN +I GL+ A
Sbjct: 303 ETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HA 361
Query: 204 KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN 263
+ +I+MF +++ P++VT + V AC G +V +K +LM
Sbjct: 362 EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG-------------RVDEGRKYFSLMR- 407
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
DMY +PN+ + M+ G EA F ++ I P
Sbjct: 408 ---DMYNI---------------EPNIKHYGCMVDMLGRAGQLEEA---FMFVESMKIEP 446
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
N + + +L AC G V+ GK+ E + ++ + E
Sbjct: 447 NAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDE 481
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 145/360 (40%), Gaps = 82/360 (22%)
Query: 141 RQLHSLAVRLGLESN-----EFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
+Q+H+ V GL SN E S +S+ G + A K+FDE P+ + N ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSV---PGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 196 GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL-------------------- 235
G +Q + ++ + ++ ++K G PD T V AC L
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 236 ---------------GDLELALQV-------HKYVFQVKS-----KQKSDTLM------- 261
GDL +A ++ HK + + + K D M
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP 205
Query: 262 ------LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
N +I KC MD A ++F + +V +W +MI GY G EAL F
Sbjct: 206 YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 316 MRESGIRPNHVTFVGVLSACVHGGKVQEGK----HFFEMMKNVYQIEPRFAHYGCMVDLL 371
MR++G P+ VT + +LSAC G ++ GK + E I + ++D+
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 372 GRAGLLEEARAMVEGMPMKA----NVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+ G ++ A + G+ + N +I G + E G+++M E +Q L+ W +
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAE--GSIEMFE----EMQRLKVWPN 379
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 271 bits (694), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/429 (36%), Positives = 234/429 (54%), Gaps = 43/429 (10%)
Query: 78 HMLHSYSAAFHWNNIIR-LYTRLEAPKK--ALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
H+ H +F WN IIR + + +P++ + +Y+ M V PD +T P +L +
Sbjct: 16 HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNP 75
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDF---------------------- 172
L +G++ H+ + GL+ + F + +++YS GD
Sbjct: 76 LHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVV 135
Query: 173 ---------EKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-----KCGF 218
+ ARK+FDE PER + SW+ +I G G+ KEA+D+F ++ +
Sbjct: 136 NAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFV 195
Query: 219 EPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLA 278
P++ TM +V SACG LG LE VH Y+ K + D ++ +LIDMY KCG ++ A
Sbjct: 196 RPNEFTMSTVLSACGRLGALEQGKWVHAYI--DKYHVEIDIVLGTALIDMYAKCGSLERA 253
Query: 279 YKVFWEI-DQPNVSSWTSMIVGYAANGLANEALDCFHYMRES-GIRPNHVTFVGVLSACV 336
+VF + + +V ++++MI A GL +E F M S I PN VTFVG+L ACV
Sbjct: 254 KRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
Query: 337 HGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIW 396
H G + EGK +F+MM + I P HYGCMVDL GR+GL++EA + + MPM+ +V+IW
Sbjct: 314 HRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIW 373
Query: 397 GCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHR 456
G L+ G++K E K L EL+P + GAYV+LSN+YA G W EV+ IR M+ +
Sbjct: 374 GSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVK 433
Query: 457 NLAKIPAYS 465
+ K+P S
Sbjct: 434 GINKVPGCS 442
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/473 (34%), Positives = 240/473 (50%), Gaps = 64/473 (13%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHS------------------------------YSA 85
++L C NL Q+ QI+ H++R + S +
Sbjct: 54 SKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRN 113
Query: 86 AFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F W +IR Y +A+ +Y M + + P +T +LKA + L +GRQ H+
Sbjct: 114 PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHA 173
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA---------- 195
RL + + I +Y K + ARKVFDE PER + SW +IA
Sbjct: 174 QTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMEC 233
Query: 196 ---------------------GLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
G +Q+ + +EA++ F ++K G D+VT+ SAC
Sbjct: 234 AAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQ 293
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNS-LIDMYGKCGRMDLAYKVFWEIDQPNVSSW 293
LG + A + + + Q SD +++ S LIDMY KCG ++ A VF ++ NV ++
Sbjct: 294 LGASKYADRAVQ-IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 294 TSMIVGYAANGLANEALDCFHYM-RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
+SMI+G A +G A EAL FHYM ++ I+PN VTFVG L AC H G V +G+ F+ M
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ ++P HY CMVDLLGR G L+EA +++ M ++ + +WG L+GAC N ++
Sbjct: 413 QTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIA 472
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
E A+HL ELEP G Y++LSN+YAS G W V R+R ++K + L K PA S
Sbjct: 473 EIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
>sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protein At3g14330
OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2
Length = 710
Score = 268 bits (686), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 232/405 (57%), Gaps = 6/405 (1%)
Query: 56 TQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRA 115
T S C L +I+ + + +L W + Y+R +P+ AL +Y+ M +
Sbjct: 175 TLFSVCRRLDLARKIFDDVTDSSLLTEKV----WAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 116 GVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKA 175
+ P +++ + LKA L L +GR +H+ V+ + ++ + + LY ++G F+ A
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
RKVFD ER + +WN++I+ LS+ R E ++F +++ T+ ++ AC +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L ++H + +KSK+K D +LNSL+DMYGKCG ++ + +VF + +++SW
Sbjct: 351 AALLTGKEIHAQI--LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+ YA NG E ++ F +M ESG+ P+ +TFV +LS C G + G FE MK +
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
++ P HY C+VD+LGRAG ++EA ++E MP K + IWG L+ +C GNV +GE
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
AK L LEP + G YV++SNIYA +W+ V++IR +MK R + K
Sbjct: 529 AKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKK 573
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVR-LGLESNEFCESGFISLYSKAGDFEKARK 177
P+ YT +L A +L G ++ SL + L N S I+L+S + ARK
Sbjct: 131 PEAYT--DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARK 188
Query: 178 VFDENPERKLGS---WNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
+FD+ + L + W A+ G S++G ++A+ +++ + EP + ++ AC
Sbjct: 189 IFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVD 248
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWT 294
L DL + +H + VK K+K D ++ N L+ +Y + G D A KVF + + NV +W
Sbjct: 249 LKDLRVGRGIHAQI--VKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWN 306
Query: 295 SMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFF-EMMKN 353
S+I + +E + F M+E I + T +L AC + GK +++K+
Sbjct: 307 SLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKS 366
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK--- 410
+ +P ++D+ G+ G +E +R + + M K ++ W ++ GN++
Sbjct: 367 --KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK-DLASWNIMLNCYAINGNIEEVI 423
Query: 411 -MGEWV 415
+ EW+
Sbjct: 424 NLFEWM 429
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 266 bits (680), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/448 (35%), Positives = 238/448 (53%), Gaps = 42/448 (9%)
Query: 54 VATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKK---ALDIYI 110
VA + C+N L YA+ + TH + N +IR + L+ P A+ +Y
Sbjct: 50 VAKFIEACSNAGHLR--YAYSVFTH--QPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 111 FMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAG 170
+ PD +T P VLK + ++ + GRQ+H V G +S+ +G I +Y G
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 171 DFEKARKVFDENPERKLGSWNA---------------------------------IIAGL 197
ARK+FDE + + WNA +I+G
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 198 SQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKS 257
++ GRA EAI++F + EPD+VT+++V SAC LG LEL ++ YV + ++
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDH-RGMNRA 284
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+L N++IDMY K G + A VF +++ NV +WT++I G A +G EAL F+ M
Sbjct: 285 VSLN-NAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
++G+RPN VTF+ +LSAC H G V GK F M++ Y I P HYGCM+DLLGRAG L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIY 437
EA +++ MP KAN IWG L+ A ++++GE L +LEP + G Y++L+N+Y
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 438 ASRGLWEEVERIRAVMKHRNLAKIPAYS 465
++ G W+E +R +MK + K+ S
Sbjct: 464 SNLGRWDESRMMRNMMKGIGVKKMAGES 491
Score = 32.7 bits (73), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+L+ Q H Y+ + + D L + I+ G + AY VF PN +M
Sbjct: 27 NLKTLKQSHCYM--IITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTM 84
Query: 297 IVGYAANGLANE---ALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKN 353
I + N A+ + + +P+ TF VL V V G+ +
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVV- 143
Query: 354 VYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGE 413
V+ + ++ + G L +AR M + M +K +V +W L+ K G +M E
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-DVNVWNALLAGYGKVG--EMDE 200
Query: 414 WVAKHLQELEP 424
A+ L E+ P
Sbjct: 201 --ARSLLEMMP 209
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II+ Y E P +A+ ++ M + + PDC TL + QL + R + +
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 149 RLGLESNEFC-ESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R G + + + +Y+K G + AR VF+ P + SWN II+G +Q+G A EAI
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAI 435
Query: 208 DMFIGLKKCG-FEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+M+ +++ G + T VSV AC G L +++H + +K+ D ++ SL
Sbjct: 436 EMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL--LKNGLYLDVFVVTSLA 493
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMYGKCGR++ A +F++I + N W ++I + +G +A+ F M + G++P+H+
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 327 TFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
TFV +LSAC H G V EG+ FEMM+ Y I P HYGCMVD+ GRAG LE A ++
Sbjct: 554 TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKS 613
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
M ++ + IWG L+ AC GNV +G+ ++HL E+EP G +V+LSN+YAS G WE V
Sbjct: 614 MSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGV 673
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+ IR++ + L K P +S
Sbjct: 674 DEIRSIAHGKGLRKTPGWS 692
Score = 149 bits (375), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 15/324 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
+ WN +I Y R + + + +FM +G+ PD T P VLKA + G ++H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
LA++ G + + + I LYS+ AR +FDE P R +GSWNA+I+G Q G AKE
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 206 AIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSL 265
A+ + GL+ D VT+VS+ SAC GD + +H Y +K +S+ + N L
Sbjct: 235 ALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSY--SIKHGLESELFVSNKL 288
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
ID+Y + GR+ KVF + ++ SW S+I Y N A+ F MR S I+P+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 326 VTFVGVLSACVHGGKVQEGKHF--FEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+T + + S G ++ + F + K + + + +V + + GL++ ARA+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGN--AVVVMYAKLGLVDSARAV 406
Query: 384 VEGMPMKANVVIWGCLMGACEKFG 407
+P +V+ W ++ + G
Sbjct: 407 FNWLP-NTDVISWNTIISGYAQNG 429
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 160/320 (50%), Gaps = 11/320 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN +I Y + K+AL +S D T+ +L A + G +HS ++
Sbjct: 219 WNAMISGYCQSGNAKEALT----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ GLES F + I LY++ G +KVFD R L SWN+II + + AI
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ +PD +T++S+ S LGD+ V + + K D + N+++ M
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR-KGWFLEDITIGNAVVVM 393
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG-IRPNHVT 327
Y K G +D A VF + +V SW ++I GYA NG A+EA++ ++ M E G I N T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 328 FVGVLSACVHGGKVQEG-KHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+V VL AC G +++G K ++KN ++ + D+ G+ G LE+A ++
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV--TSLADMYGKCGRLEDALSLFYQ 511
Query: 387 MPMKANVVIWGCLMGACEKF 406
+P + N V W L+ AC F
Sbjct: 512 IP-RVNSVPWNTLI-ACHGF 529
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 18/272 (6%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L+ + LH+ V N + ++LY G+ AR FD R + +WN +I+G
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 197 LSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQ 255
+ G + E I F + + G PD T SV AC ++ D ++H +K
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH--CLALKFGF 181
Query: 256 KSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHY 315
D + SLI +Y + + A +F E+ ++ SW +MI GY +G A EAL
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL--- 238
Query: 316 MRESGIRP-NHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLG 372
+G+R + VT V +LSAC G G H + + + +E ++DL
Sbjct: 239 --SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIK---HGLESELFVSNKLIDLYA 293
Query: 373 RAGLLEEARAMVEGMPMKANVVIWGCLMGACE 404
G L + + + + M ++ +++ W ++ A E
Sbjct: 294 EFGRLRDCQKVFDRMYVR-DLISWNSIIKAYE 324
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 12/177 (6%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
V SKQ + + L+++Y G + LA F I +V +W MI GY G ++E +
Sbjct: 78 VVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVI 137
Query: 311 DCFH-YMRESGIRPNHVTFVGVLSAC---VHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC 366
CF +M SG+ P++ TF VL AC + G K+ F M +VY
Sbjct: 138 RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVA-------AS 190
Query: 367 MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
++ L R + AR + + MP++ ++ W ++ + GN K ++ L+ ++
Sbjct: 191 LIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMISGYCQSGNAKEALTLSNGLRAMD 246
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 266 bits (680), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 248/466 (53%), Gaps = 24/466 (5%)
Query: 1 MLSLVPGISLSSLRMKSSHPLLHRLCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSK 60
++S++P +S +LR+ S +H F V IS A + +K
Sbjct: 239 IVSVLPAVS--ALRLISVGKEIHGYAMRSGFDSLVNISTA-------------LVDMYAK 283
Query: 61 CTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPD 120
C +L Q++ ++ +++ WN++I Y + E PK+A+ I+ M GV P
Sbjct: 284 CGSLETARQLFDGMLERNVVS-------WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 121 CYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFD 180
++ L A L LE GR +H L+V LGL+ N + IS+Y K + + A +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 181 ENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLEL 240
+ R L SWNA+I G +Q+GR +A++ F ++ +PD T VSV +A L
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 241 ALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGY 300
A +H V ++S + + +L+DMY KCG + +A +F + + +V++W +MI GY
Sbjct: 457 AKWIHGVV--MRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGY 514
Query: 301 AANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPR 360
+G AL+ F M++ I+PN VTF+ V+SAC H G V+ G F MMK Y IE
Sbjct: 515 GTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELS 574
Query: 361 FAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQ 420
HYG MVDLLGRAG L EA + MP+K V ++G ++GAC+ NV E A+ L
Sbjct: 575 MDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLF 634
Query: 421 ELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
EL P G +V+L+NIY + +WE+V ++R M + L K P S+
Sbjct: 635 ELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 39/332 (11%)
Query: 45 DTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRL----E 100
+ +E PA ++ L +C++L +L QI + + + Y F ++ L+ R E
Sbjct: 34 NVYEHPAALL---LERCSSLKELRQILPLVFKNGL---YQEHFFQTKLVSLFCRYGSVDE 87
Query: 101 APK---------------------------KALDIYIFMSRAGVLPDCYTLPIVLKASCQ 133
A + KAL ++ M V P Y +LK
Sbjct: 88 AARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD 147
Query: 134 LFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAI 193
L +G+++H L V+ G + F +G ++Y+K +ARKVFD PER L SWN I
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTI 207
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
+AG SQ+G A+ A++M + + +P +T+VSV A +L + + ++H Y ++S
Sbjct: 208 VAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA--MRS 265
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
S + +L+DMY KCG ++ A ++F + + NV SW SMI Y N EA+ F
Sbjct: 266 GFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIF 325
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGK 345
M + G++P V+ +G L AC G ++ G+
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 147/305 (48%), Gaps = 30/305 (9%)
Query: 111 FMSRAGVLP-DCYTLPI-VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSK 168
F+S +P + Y P +L C +L+ RQ+ L + GL F ++ +SL+ +
Sbjct: 24 FLSERNYIPANVYEHPAALLLERCS--SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 169 AGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSV 228
G ++A +VF+ + ++ ++ G ++ +A+ F+ ++ EP +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 229 TSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQP 288
CG +L + ++H + VKS D + L +MY KC +++ A KVF + +
Sbjct: 142 LKVCGDEAELRVGKEIHGLL--VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER 199
Query: 289 NVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VH 337
++ SW +++ GY+ NG+A AL+ M E ++P+ +T V VL A +H
Sbjct: 200 DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIH 259
Query: 338 GGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWG 397
G ++ G F+ + N+ +VD+ + G LE AR + +GM ++ NVV W
Sbjct: 260 GYAMRSG---FDSLVNIST---------ALVDMYAKCGSLETARQLFDGM-LERNVVSWN 306
Query: 398 CLMGA 402
++ A
Sbjct: 307 SMIDA 311
>sp|Q9CA73|PP119_ARATH Putative pentatricopeptide repeat-containing protein At1g74400
OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1
Length = 462
Score = 266 bits (679), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 229/391 (58%), Gaps = 9/391 (2%)
Query: 77 THMLHSYSAAFHWNNIIRLYTRLEAPKKAL-DIYIFMSRAGVLPDCYTLPIVLKASCQLF 135
+ +LH ++ + N+ ++ Y P KAL D ++ D +++ +K S
Sbjct: 19 SFLLHFHTKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQK 78
Query: 136 ALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK-LGSWNAI 193
A + GRQ+H+L +LG + ++ + YS GD + AR+VFDE PE++ + W A+
Sbjct: 79 ASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAM 138
Query: 194 IAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
I+ +++ + EAI++F ++ E D V + SAC LG +++ +++ + K
Sbjct: 139 ISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKR 198
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ D + NSL++MY K G + A K+F E + +V+++TSMI GYA NG A E+L+ F
Sbjct: 199 RLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELF 258
Query: 314 HYMR------ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
M+ ++ I PN VTF+GVL AC H G V+EGK F+ M Y ++PR AH+GCM
Sbjct: 259 KKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
VDL R+G L++A + MP+K N VIW L+GAC GNV++GE V + + EL+
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Query: 428 GAYVVLSNIYASRGLWEEVERIRAVMKHRNL 458
G YV LSNIYAS+G+W+E ++R ++ R +
Sbjct: 379 GDYVALSNIYASKGMWDEKSKMRDRVRKRRM 409
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 265 bits (677), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 210/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ YT+ K L ++ M + G D +TL V K LFA+ G+Q+H+ A+
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G + + + SG + +Y K GD A+ FD P +W +I+G ++G + A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++ G PD+ T+ ++ A L LE Q+H ++ +D + SL+DM
Sbjct: 605 VFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT--NDPFVGTSLVDM 662
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG +D AY +F I+ N+++W +M+VG A +G E L F M+ GI+P+ VTF
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSAC H G V E M Y I+P HY C+ D LGRAGL+++A ++E M
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
M+A+ ++ L+ AC G+ + G+ VA L ELEP AYV+LSN+YA+ W+E++
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 842
Query: 449 IRAVMKHRNLAKIPAYS 465
R +MK + K P +S
Sbjct: 843 ARTMMKGHKVKKDPGFS 859
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 157/304 (51%), Gaps = 8/304 (2%)
Query: 106 LDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISL 165
L + M + V D T ++L + ++ +L +G+Q+H +A++LGL+ + I++
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 166 YSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
Y K F AR VFD ER L SWN++IAG++Q+G EA+ +F+ L +CG +PD TM
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 226 VSVTSACGSLGD-LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE 284
SV A SL + L L+ QVH V +K SD+ + +LID Y + M A ++ +E
Sbjct: 420 TSVLKAASSLPEGLSLSKQVH--VHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFE 476
Query: 285 IDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
++ +W +M+ GY + ++ L F M + G R + T V C + +G
Sbjct: 477 RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536
Query: 345 KHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGAC 403
K +K+ Y ++ + ++D+ + G + A+ + +P+ +V W ++ C
Sbjct: 537 KQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPVPDDVA-WTTMISGC 593
Query: 404 EKFG 407
+ G
Sbjct: 594 IENG 597
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 157/335 (46%), Gaps = 6/335 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL-FALEIGRQLHSLA 147
WN++I + +A+ +++ + R G+ PD YT+ VLKA+ L L + +Q+H A
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+++ S+ F + I YS+ ++A +F E L +WNA++AG +Q + +
Sbjct: 444 IKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTL 502
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F + K G DD T+ +V CG L + QVH Y +KS D + + ++D
Sbjct: 503 KLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYA--IKSGYDLDLWVSSGILD 560
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY KCG M A F I P+ +WT+MI G NG A F MR G+ P+ T
Sbjct: 561 MYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++G+ + F +VD+ + G +++A + + +
Sbjct: 621 IATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS-LVDMYAKCGSIDDAYCLFKRI 679
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL 422
M N+ W ++ + G K + K ++ L
Sbjct: 680 EM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 7/197 (3%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAG 196
L +G+ H+ + F + IS+YSK G AR+VFD+ P+R L SWN+I+A
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 197 LSQDGRA-----KEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQV 251
+Q ++A +F L++ +T+ + C G + + H Y ++
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKI 174
Query: 252 KSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALD 311
D + +L+++Y K G++ +F E+ +V W M+ Y G EA+D
Sbjct: 175 --GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 312 CFHYMRESGIRPNHVTF 328
SG+ PN +T
Sbjct: 233 LSSAFHSSGLNPNEITL 249
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 124/312 (39%), Gaps = 50/312 (16%)
Query: 44 LDTHEDPAKIVATQL----SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTR- 98
L E+P + + L SKC +L +++ + ++ WN+I+ Y +
Sbjct: 66 LTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS-------WNSILAAYAQS 118
Query: 99 ----LEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLES 154
+E ++A ++ + + V TL +LK + H A ++GL+
Sbjct: 119 SECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDG 178
Query: 155 NEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLK 214
+EF +++Y K G ++ + +F+E P R + WN ++ + G +EAID+
Sbjct: 179 DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH 238
Query: 215 KCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGR 274
G P+++T+ + G D A QV + + S+ + N + Y G+
Sbjct: 239 SSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQ 295
Query: 275 MDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSA 334
Y+A L CF M ES + + VTF+ +L+
Sbjct: 296 -------------------------YSA------LLKCFADMVESDVECDQVTFILMLAT 324
Query: 335 CVHGGKVQEGKH 346
V + G+
Sbjct: 325 AVKVDSLALGQQ 336
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 264 bits (675), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 218/410 (53%), Gaps = 33/410 (8%)
Query: 82 SYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
S+ WN +I Y R +A ++ M + V+PD L ++ A + + R
Sbjct: 173 SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNR 232
Query: 142 QLHSLAVRLGLE-------------------------------SNEFCESGFISLYSKAG 170
++ + + N F + +S YSK G
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 171 DFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTS 230
+ A+ +FD+ ++ L W +I+ + +EA+ +F + G +PD V+M SV S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVIS 352
Query: 231 ACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNV 290
AC +LG L+ A VH + + +S+ + N+LI+MY KCG +D VF ++ + NV
Sbjct: 353 ACANLGILDKAKWVHSCIHV--NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNV 410
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
SW+SMI + +G A++AL F M++ + PN VTFVGVL C H G V+EGK F
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
M + Y I P+ HYGCMVDL GRA LL EA ++E MP+ +NVVIWG LM AC G ++
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
+G++ AK + ELEP DGA V++SNIYA WE+V IR VM+ +N+ K
Sbjct: 531 LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFK 580
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 211/465 (45%), Gaps = 67/465 (14%)
Query: 51 AKIVATQLSKCTNLLQLNQIYAHIIRT---HMLHSY------------------------ 83
A + +LS C +L + Q++AHI+RT H L+S+
Sbjct: 12 ANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIP 71
Query: 84 --SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGR 141
+ +N +R +R P+ + Y + G D ++ +LKA ++ AL G
Sbjct: 72 SPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGM 131
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
+LH +A ++ + F E+GF+ +Y+ G AR VFDE R + +WN +I + G
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
EA +F +K PD++ + ++ SACG G++ + Y F +++ + DT +
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAI--YEFLIENDVRMDTHL 249
Query: 262 LNSLIDMYG-------------------------------KCGRMDLAYKVFWEIDQPNV 290
L +L+ MY KCGR+D A +F + ++ ++
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 291 SSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM 350
WT+MI Y + EAL F M SGI+P+ V+ V+SAC + G + + K
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSC 369
Query: 351 MKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVK 410
+ +V +E + ++++ + G L+ R + E MP + NVV W ++ A G
Sbjct: 370 I-HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEAS 427
Query: 411 MG-EWVAKHLQE-LEPWSDGAYVVLSNIYASRGLWEEVERIRAVM 453
A+ QE +EP ++ +V + + GL EE ++I A M
Sbjct: 428 DALSLFARMKQENVEP-NEVTFVGVLYGCSHSGLVEEGKKIFASM 471
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/501 (32%), Positives = 241/501 (48%), Gaps = 87/501 (17%)
Query: 25 LCKTHTFRKHVTISAASSFLDTHEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYS 84
+ KT F + S +F T+ +P + YAH I +
Sbjct: 62 MLKTGLFHDTFSASKLVAFAATNPEPKTVS----------------YAHSILNRI--GSP 103
Query: 85 AAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLH 144
F N++IR Y P+ AL ++ M V PD Y+ VLKA E GRQ+H
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIH 163
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKV-------------------------- 178
L ++ GL ++ F E+ +++Y ++G FE ARKV
Sbjct: 164 GLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVD 223
Query: 179 -----FDENPERKLGSWNAIIAGLSQDGRAKEAIDMF--------------------IG- 212
FDE ER + SWN +I+G + G KEA ++F +G
Sbjct: 224 EARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGC 283
Query: 213 -----------LKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
L +PD T+VSV SAC SLG L VH Y+ K + + +
Sbjct: 284 YNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI--DKHGIEIEGFL 341
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGI 321
+L+DMY KCG++D A +VF + +VS+W S+I + +GL +AL+ F M G
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 322 RPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEAR 381
+PN +TF+GVLSAC H G + + + FEMM +VY++EP HYGCMVDLLGR G +EEA
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 382 AMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRG 441
+V +P ++ L+GAC++FG ++ E +A L EL Y +SN+YAS G
Sbjct: 462 ELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDG 521
Query: 442 LWEEV----ERIRAVMKHRNL 458
WE+V +RA +R+L
Sbjct: 522 RWEKVIDGRRNMRAERVNRSL 542
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 210/383 (54%), Gaps = 14/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W + YT ++A+D++ M GV PD Y + VL A + L+ G +
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ ++ N F + ++LY+K G EKAR VFD E+ + +W+ +I G + + KE I+
Sbjct: 240 EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELA------LQVHKYVFQVKSKQKSDTLML 262
+F+ + + +PD ++V S+C SLG L+L + H+++ ++ M
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL--------TNLFMA 351
Query: 263 NSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIR 322
N+LIDMY KCG M ++VF E+ + ++ + I G A NG + F + GI
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
P+ TF+G+L CVH G +Q+G FF + VY ++ HYGCMVDL GRAG+L++A
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 383 MVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGL 442
++ MPM+ N ++WG L+ C + ++ E V K L LEPW+ G YV LSNIY+ G
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 443 WEEVERIRAVMKHRNLAKIPAYS 465
W+E +R +M + + KIP YS
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYS 554
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 192/359 (53%), Gaps = 6/359 (1%)
Query: 71 YAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA 130
Y++++ +H + F +N++I + + LD+++ + + G+ +T P+VLKA
Sbjct: 63 YSYLLFSHT--QFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 131 SCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSW 190
+ + ++G LHSL V+ G + + +S+YS +G A K+FDE P+R + +W
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 180
Query: 191 NAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQ 250
A+ +G + GR +EAID+F + + G +PD +V V SAC +GDL+ + KY+ +
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEAL 310
++ ++ S + +L+++Y KCG+M+ A VF + + ++ +W++MI GYA+N E +
Sbjct: 241 MEMQKNS--FVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 311 DCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDL 370
+ F M + ++P+ + VG LS+C G + G+ ++ ++ ++D+
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDM 357
Query: 371 LGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA 429
+ G + + + M K ++VI + K G+VK+ V ++L DG+
Sbjct: 358 YAKCGAMARGFEVFKEMKEK-DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 218/380 (57%), Gaps = 6/380 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIY--IFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN++I Y+ K ++ + +S G P+ T ++ A + E GR +H L
Sbjct: 100 WNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGL 159
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
++ G+ + FI+ Y K GD + K+F++ + L SWN +I Q+G A++
Sbjct: 160 VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG 219
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYV-FQVKSKQKSDTLMLNSL 265
+ F ++ G EPD T ++V +C +G + LA +H + F S K T +L
Sbjct: 220 LAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT---TAL 276
Query: 266 IDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNH 325
+D+Y K GR++ + VF EI P+ +WT+M+ YA +G +A+ F M GI P+H
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 326 VTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
VTF +L+AC H G V+EGKH+FE M Y+I+PR HY CMVDLLGR+GLL++A +++
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEE 445
MPM+ + +WG L+GAC + + ++G A+ L ELEP YV+LSNIY++ GLW++
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 446 VERIRAVMKHRNLAKIPAYS 465
RIR +MK + L + S
Sbjct: 457 ASRIRNLMKQKGLVRASGCS 476
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 158/348 (45%), Gaps = 32/348 (9%)
Query: 136 ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIA 195
++E+ R LH V+ + F + Y + G A K+FDE PER L SWN++I+
Sbjct: 46 SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLIS 105
Query: 196 GLSQDGRAKEAIDMF--IGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKS 253
G S G + ++ + + + GF P++VT +S+ SAC G E +H V +
Sbjct: 106 GYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGV 165
Query: 254 KQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+ + ++N+ I+ YGK G + + K+F ++ N+ SW +MIV + NGLA + L F
Sbjct: 166 LE--EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYF 223
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQ--EGKHFFEMMKNVYQIEPRFAHYGC----M 367
+ R G P+ TF+ VL +C G V+ +G H M F+ C +
Sbjct: 224 NMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG-------FSGNKCITTAL 276
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSD 427
+DL + G LE++ + + + + W ++ A G G KH + + +
Sbjct: 277 LDLYSKLGRLEDSSTVFHEIT-SPDSMAWTAMLAAYATHG---FGRDAIKHFELMVHYGI 332
Query: 428 G----AYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRLD 471
+ L N + GL EE + M R Y + RLD
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKR-------YRIDPRLD 373
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 212/377 (56%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I+ + K+A++ + M G+ D Y VL A L A+ G+Q+H+ +
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
R + + + S I +Y K A+ VFD ++ + SW A++ G Q GRA+EA+
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVK 357
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ +++ G +PD T+ SAC ++ LE Q H + S + NSL+ +
Sbjct: 358 IFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA--ITSGLIHYVTVSNSLVTL 415
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D + ++F E++ + SWT+M+ YA G A E + F M + G++P+ VT
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
GV+SAC G V++G+ +F++M + Y I P HY CM+DL R+G LEEA + GMP
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+ + W L+ AC GN+++G+W A+ L EL+P Y +LS+IYAS+G W+ V +
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQ 595
Query: 449 IRAVMKHRNLAKIPAYS 465
+R M+ +N+ K P S
Sbjct: 596 LRRGMREKNVKKEPGQS 612
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 164/355 (46%), Gaps = 45/355 (12%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSR--AGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN +I Y+ A+ Y M R + L TL +LK S + +G+Q+H
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRV-TLMTMLKLSSSNGHVSLGKQIHGQ 164
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVF----DENP------------------- 183
++LG ES S + +Y+ G A+KVF D N
Sbjct: 165 VIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDA 224
Query: 184 -------ERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLG 236
E+ SW A+I GL+Q+G AKEAI+ F +K G + D SV ACG LG
Sbjct: 225 LQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 237 DLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSM 296
+ Q+H + +++ + + ++LIDMY KC + A VF + Q NV SWT+M
Sbjct: 285 AINEGKQIHACI--IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAM 342
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
+VGY G A EA+ F M+ SGI P+H T +SAC + ++EG F
Sbjct: 343 VVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK-----A 397
Query: 357 IEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
I HY +V L G+ G ++++ + M ++ + V W ++ A +FG
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-DAVSWTAMVSAYAQFG 451
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 41/282 (14%)
Query: 153 ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-I 211
+ N F + + YSKAG + F++ P+R +WN +I G S G A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 212 GLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK----------------- 254
++ VT++++ S G + L Q+H V ++ +
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 255 ------------QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAA 302
+T+M NSL+ CG ++ A ++F +++ +V SW +MI G A
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQ 247
Query: 303 NGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFA 362
NGLA EA++CF M+ G++ + F VL AC G + EGK + I F
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI-----IRTNFQ 302
Query: 363 HY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM 400
+ ++D+ + L A+ + + M K NVV W ++
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK-NVVSWTAMV 343
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF 313
+T + N+++ Y A +VF I QPN+ SW ++++ Y+ GL +E F
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
>sp|Q9ZQA1|PP188_ARATH Pentatricopeptide repeat-containing protein At2g36730
OS=Arabidopsis thaliana GN=PCMP-E44 PE=3 SV=1
Length = 501
Score = 263 bits (671), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/395 (37%), Positives = 219/395 (55%), Gaps = 9/395 (2%)
Query: 76 RTHMLHSY-SAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQL 134
RT +LHS S WN + R Y+ ++P +++ +Y M R G+ P+ T P +LKA
Sbjct: 67 RTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF 126
Query: 135 FALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAII 194
L GRQ+ ++ G + + + + I LY ARKVFDE ER + SWN+I+
Sbjct: 127 LGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIM 186
Query: 195 AGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSK 254
L ++G+ + F + F PD+ TMV + SACG G+L L VH V + +
Sbjct: 187 TALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQV--MVRE 242
Query: 255 QKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF- 313
+ + + +L+DMY K G ++ A VF + NV +W++MIVG A G A EAL F
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 314 HYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
M+ES +RPN+VTF+GVL AC H G V +G +F M+ +++I+P HYG MVD+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACE---KFGNVKMGEWVAKHLQELEPWSDGAY 430
AG L EA ++ MP + + V+W L+ AC + +GE V K L ELEP G
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNL 422
Query: 431 VVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
V+++N +A +W E +R VMK + KI S
Sbjct: 423 VIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/377 (38%), Positives = 211/377 (55%), Gaps = 3/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ + P AL + M R G P+ +TL V+KA+ G QLH V
Sbjct: 129 WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCV 188
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ G +SN S + LY++ G + A+ VFD R SWNA+IAG ++ ++A++
Sbjct: 189 KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALE 248
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F G+ + GF P + S+ AC S G LE VH Y+ +KS +K N+L+DM
Sbjct: 249 LFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM--IKSGEKLVAFAGNTLLDM 306
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y K G + A K+F + + +V SW S++ YA +G EA+ F MR GIRPN ++F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+ VL+AC H G + EG H++E+MK I P HY +VDLLGRAG L A +E MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
++ IW L+ AC N ++G + A+H+ EL+P G +V+L NIYAS G W + R
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 449 IRAVMKHRNLAKIPAYS 465
+R MK + K PA S
Sbjct: 486 VRKKMKESGVKKEPACS 502
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 146/289 (50%), Gaps = 5/289 (1%)
Query: 127 VLKASCQLFALEI-GRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPER 185
L C +F L I GR +H+ ++ + + +++Y+K G E+ARKVF++ P+R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 186 KLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVH 245
+W +I+G SQ R +A+ F + + G+ P++ T+ SV A + Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 246 KYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGL 305
F VK S+ + ++L+D+Y + G MD A VF ++ N SW ++I G+A
Sbjct: 185 G--FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 306 ANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYG 365
+AL+ F M G RP+H ++ + AC G +++GK M + FA
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG-N 301
Query: 366 CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEW 414
++D+ ++G + +AR + + + K +VV W L+ A + G K W
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAVW 349
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
VH ++ Q S + D +M N+L++MY KCG ++ A KVF ++ Q + +WT++I GY+ +
Sbjct: 82 VHAHILQ--SIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSAC-----------VHGGKVQEGKHFFEMMK 352
+AL F+ M G PN T V+ A +HG V+ G
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG-----FDS 194
Query: 353 NVYQIEPRFAHYG-CMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLM-GACEKFGNVK 410
NV H G ++DL R GL+++A+ + + + + N V W L+ G + G K
Sbjct: 195 NV--------HVGSALLDLYTRYGLMDDAQLVFDALESR-NDVSWNALIAGHARRSGTEK 245
Query: 411 MGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSLATRL 470
E L++ S +Y L +S G E+ + + A M ++ K+ A++ T L
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI-KSGEKLVAFAGNTLL 304
Query: 471 D 471
D
Sbjct: 305 D 305
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 223/383 (58%), Gaps = 12/383 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA----SCQLFALEIGRQLH 144
WN + R T ++ L +Y M+R GV D +T VLKA C + L G+++H
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ R G S+ + + + +Y++ G + A VF P R + SW+A+IA +++G+A
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 205 EAIDMFIGLKKCGFE--PDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM- 261
EA+ F + + + P+ VTMVSV AC SL LE +H Y+ ++ D+++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL----RRGLDSILP 321
Query: 262 -LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+++L+ MYG+CG++++ +VF + +V SW S+I Y +G +A+ F M +G
Sbjct: 322 VISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANG 381
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA 380
P VTFV VL AC H G V+EGK FE M + I+P+ HY CMVDLLGRA L+EA
Sbjct: 382 ASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEA 441
Query: 381 RAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASR 440
MV+ M + +WG L+G+C GNV++ E ++ L LEP + G YV+L++IYA
Sbjct: 442 AKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEA 501
Query: 441 GLWEEVERIRAVMKHRNLAKIPA 463
+W+EV+R++ +++HR L K+P
Sbjct: 502 QMWDEVKRVKKLLEHRGLQKLPG 524
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 159/326 (48%), Gaps = 25/326 (7%)
Query: 142 QLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDG 201
++H + G + + F + I +YS G + ARKVFD+ +R + WNA+ L+ G
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAG 157
Query: 202 RAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC----GSLGDLELALQVHKYVFQVKSKQKS 257
+E + ++ + + G E D T V AC ++ L ++H ++ + S
Sbjct: 158 HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL--TRRGYSS 215
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF-HYM 316
++ +L+DMY + G +D A VF + NV SW++MI YA NG A EAL F M
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 317 RES-GIRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGCMVDLLGR 373
RE+ PN VT V VL AC +++GK H + + + + I P + +V + GR
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGR 332
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGA---- 429
G LE + + + M + +VV W L+ + +G G+ + +E+ ++GA
Sbjct: 333 CGKLEVGQRVFDRMHDR-DVVSWNSLISS---YGVHGYGKKAIQIFEEM--LANGASPTP 386
Query: 430 --YVVLSNIYASRGLWEEVERIRAVM 453
+V + + GL EE +R+ M
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETM 412
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 262 bits (669), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 143/411 (34%), Positives = 227/411 (55%), Gaps = 33/411 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
F WN +I Y R++ ++++++ + M R V P TL +VL A ++ ++ +++H
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEY 261
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFE---------KARKV------------------- 178
E + E+ ++ Y+ G+ + KAR V
Sbjct: 262 VSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLA 321
Query: 179 ---FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSL 235
FD+ P R SW +I G + G E++++F ++ G PD+ TMVSV +AC L
Sbjct: 322 RTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHL 381
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
G LE+ + Y+ K+K K+D ++ N+LIDMY KCG + A KVF ++DQ + +WT+
Sbjct: 382 GSLEIGEWIKTYI--DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
M+VG A NG EA+ F M++ I+P+ +T++GVLSAC H G V + + FF M++ +
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWV 415
+IEP HYGCMVD+LGRAGL++EA ++ MPM N ++WG L+GA + M E
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELA 559
Query: 416 AKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
AK + ELEP + Y +L NIYA W+++ +R + + K P +SL
Sbjct: 560 AKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSL 610
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 171/334 (51%), Gaps = 35/334 (10%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKA-SCQLFALEIGRQLHSLA 147
WNN+I+ +++++ + + +Y+ M + GV PD +T P +L AL G++LH
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
V+ GL SN + ++ + +YS G + AR VFD + + SWN +I+G ++ +E+I
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + +++ P VT++ V SAC + D +L +VH+YV + K+ + + N+L++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKT--EPSLRLENALVN 279
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTS-------------------------------M 296
Y CG MD+A ++F + +V SWTS M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 297 IVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQ 356
I GY G NE+L+ F M+ +G+ P+ T V VL+AC H G ++ G+ + + + +
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGE-WIKTYIDKNK 398
Query: 357 IEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMK 390
I+ ++D+ + G E+A+ + M +
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 7/275 (2%)
Query: 141 RQLHSLAVRLGLESN-EFCESGFISLYSK-AGDFEKARKVFDENPERKLGSWNAIIAGLS 198
+QLHS ++ G+ N F + F+ S+ G A K+F + PE + WN +I G S
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 199 QDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGD-LELALQVHKYVFQVKSKQKS 257
+ E + +++ + K G PD T + + G L ++H +V VK S
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV--VKFGLGS 168
Query: 258 DTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR 317
+ + N+L+ MY CG MD+A VF + +V SW MI GY E+++ M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 318 ESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLL 377
+ + P VT + VLSAC K E + + EP +V+ G +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSEC-KTEPSLRLENALVNAYAACGEM 287
Query: 378 EEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
+ A + M + +V+ W ++ + GN+K+
Sbjct: 288 DIAVRIFRSMKAR-DVISWTSIVKGYVERGNLKLA 321
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 221/402 (54%), Gaps = 34/402 (8%)
Query: 96 YTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESN 155
Y R ++AL ++ M +GV PD ++ + + QL + G+ H +R G ES
Sbjct: 312 YVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESW 371
Query: 156 EFCESGFISLYSKA-------------------------------GDFEKARKVFDENPE 184
+ + I +Y K G+ + A + F+ PE
Sbjct: 372 DNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE 431
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLK-KCGFEPDDVTMVSVTSACGSLGDLELALQ 243
+ + SWN II+GL Q +EAI++F ++ + G D VTM+S+ SACG LG L+LA
Sbjct: 432 KNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKW 491
Query: 244 VHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAAN 303
++ Y+ K+ + D + +L+DM+ +CG + A +F + +VS+WT+ I A
Sbjct: 492 IYYYI--EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 304 GLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAH 363
G A A++ F M E G++P+ V FVG L+AC HGG VQ+GK F M ++ + P H
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 364 YGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE 423
YGCMVDLLGRAGLLEEA ++E MPM+ N VIW L+ AC GNV+M + A+ +Q L
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLA 669
Query: 424 PWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
P G+YV+LSN+YAS G W ++ ++R MK + L K P S
Sbjct: 670 PERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 711
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 148/266 (55%), Gaps = 3/266 (1%)
Query: 81 HSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIG 140
SY F +N++IR Y +A+ +++ M +G+ PD YT P L A + A G
Sbjct: 94 ESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNG 153
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
Q+H L V++G + F ++ + Y++ G+ + ARKVFDE ER + SW ++I G ++
Sbjct: 154 IQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 201 GRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDT 259
AK+A+D+F + + P+ VTMV V SAC L DLE +V Y F S + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV--YAFIRNSGIEVND 271
Query: 260 LMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRES 319
LM+++L+DMY KC +D+A ++F E N+ +M Y GL EAL F+ M +S
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 320 GIRPNHVTFVGVLSACVHGGKVQEGK 345
G+RP+ ++ + +S+C + GK
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGK 357
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 107/218 (49%), Gaps = 3/218 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLA 147
WN II + ++A++++ M S+ GV D T+ + A L AL++ + ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 148 VRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ G++ + + + ++S+ GD E A +F+ R + +W A I ++ G A+ AI
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++F + + G +PD V V +AC G ++ ++ + ++ D + ++D
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPED-VHYGCMVD 615
Query: 268 MYGKCGRMDLAYKVFWEID-QPNVSSWTSMIVGYAANG 304
+ G+ G ++ A ++ ++ +PN W S++ G
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>sp|Q5XEY7|PP309_ARATH Pentatricopeptide repeat-containing protein At4g14170
OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2
Length = 477
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 222/401 (55%), Gaps = 4/401 (0%)
Query: 66 QLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAG-VLPDCYTL 124
+LN ++ + Y F WN II ++R K++D+++ M R V PD +TL
Sbjct: 78 KLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTL 137
Query: 125 PIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE 184
P++L+A + G +H L ++LG S+ F S + +Y G ARK+FD+ P
Sbjct: 138 PLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPV 197
Query: 185 RKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQV 244
R + A+ G Q G A + MF + GF D V MVS+ ACG LG L+ V
Sbjct: 198 RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 245 HKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANG 304
H + + S + + N++ DMY KC +D A+ VF + + +V SW+S+I+GY +G
Sbjct: 258 HGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDG 315
Query: 305 LANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY 364
+ F M + GI PN VTF+GVLSAC HGG V++ +F +M+ Y I P HY
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHY 374
Query: 365 GCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEP 424
+ D + RAGLLEEA +E MP+K + + G ++ C+ +GNV++GE VA+ L +L+P
Sbjct: 375 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 434
Query: 425 WSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
YV L+ +Y++ G ++E E +R MK + ++K+P S
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 152 LESNEFCESGFISLYSKAGD-FEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMF 210
L SN S + YSK F + VF P R + SWN II S+ G A ++ID+F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 211 IGL-KKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMY 269
+ + ++ PDD T+ + AC + + + +H V +K S + ++L+ MY
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIH--VLCLKLGFSSSLFVSSALVIMY 179
Query: 270 GKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFV 329
G++ A K+F ++ + +T+M GY G A L F M SG + V V
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 330 GVLSACVHGGKVQEGK 345
+L AC G ++ GK
Sbjct: 240 SLLMACGQLGALKHGK 255
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 207/366 (56%), Gaps = 3/366 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +++ Y + + ++ M G+ D TL ++KA +FA ++G+ +H +++
Sbjct: 178 WGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSI 237
Query: 149 RLG-LESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
R ++ +++ ++ I +Y K + ARK+F+ + +R + W +I+G ++ RA EA
Sbjct: 238 RRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAF 297
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
D+F + + P+ T+ ++ +C SLG L VH Y+ +++ + D + S ID
Sbjct: 298 DLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYM--IRNGIEMDAVNFTSFID 355
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVT 327
MY +CG + +A VF + + NV SW+SMI + NGL EALDCFH M+ + PN VT
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVT 415
Query: 328 FVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
FV +LSAC H G V+EG FE M Y + P HY CMVDLLGRAG + EA++ ++ M
Sbjct: 416 FVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNM 475
Query: 388 PMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVE 447
P+K WG L+ AC V + +A+ L +EP YV+LSNIYA G+WE V
Sbjct: 476 PVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVN 535
Query: 448 RIRAVM 453
+R M
Sbjct: 536 CVRRKM 541
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 7/317 (2%)
Query: 89 WNNIIRLYTRLEAP--KKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
WN I+ Y++ + L +Y M R D + L +KA L LE G +H L
Sbjct: 75 WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGL 134
Query: 147 AVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEA 206
A++ GL+ +++ + +Y++ G E A+KVFDE P R W ++ G + + E
Sbjct: 135 AMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEV 194
Query: 207 IDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLI 266
+F ++ G D +T++ + ACG++ ++ VH + +SD L S+I
Sbjct: 195 FRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA-SII 253
Query: 267 DMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHV 326
DMY KC +D A K+F NV WT++I G+A A EA D F M I PN
Sbjct: 254 DMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQC 313
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T +L +C G ++ GK M++N IE ++ +D+ R G ++ AR + +
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRN--GIEMDAVNFTSFIDMYARCGNIQMARTVFD 371
Query: 386 GMPMKANVVIWGCLMGA 402
MP + NV+ W ++ A
Sbjct: 372 MMPER-NVISWSSMINA 387
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 229/407 (56%), Gaps = 27/407 (6%)
Query: 80 LHSYSAAFHWNNIIRLYTRLEAPKKALDIY-IFMSRAGVLPDCYTLPIV----LKASCQL 134
LH+ S+AF + RL P+ IY + + L ++ P+V K+ L
Sbjct: 104 LHA-SSAF---SFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHL 159
Query: 135 FALEIGRQLHSLAVRLG------------LESNEFCESGFISLYSKAGDFEKARKVFDEN 182
+ + LHS A + E N + +S Y+++GD A +F++
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM 219
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELA 241
PER + SWNAI+A +Q+G EA+ +F + + P++VT+V V SAC G L+LA
Sbjct: 220 PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
+H + + + SD + NSL+D+YGKCG ++ A VF + ++++W SMI +A
Sbjct: 280 KGIHAFAY--RRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 302 ANGLANEALDCFHYMRE---SGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
+G + EA+ F M + + I+P+H+TF+G+L+AC HGG V +G+ +F++M N + IE
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
PR HYGC++DLLGRAG +EA ++ M MKA+ IWG L+ AC+ G++ + E K+
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 419 LQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
L L P + G +++N+Y G WEE R R ++KH+N K P +S
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWS 504
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/382 (39%), Positives = 207/382 (54%), Gaps = 7/382 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y + + KAL +Y M G D +TL VL A L L GRQ H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 149 RLGLESNEFCESGFISLYSKAGDFE---KARKVFDENPERKLGSWNAIIAGLSQDGR-AK 204
+ G N SG I YSK G + + KVF E L WN +I+G S + ++
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLN- 263
EA+ F +++ G PDD + V VTSAC +L Q+H +KS S+ + +N
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHG--LAIKSHIPSNRISVNN 385
Query: 264 SLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRP 323
+LI +Y K G + A VF + + N S+ MI GYA +G EAL + M +SGI P
Sbjct: 386 ALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAP 445
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
N +TFV VLSAC H GKV EG+ +F MK ++IEP HY CM+DLLGRAG LEEA
Sbjct: 446 NKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERF 505
Query: 384 VEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLW 443
++ MP K V W L+GAC K N+ + E A L ++P + YV+L+N+YA W
Sbjct: 506 IDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKW 565
Query: 444 EEVERIRAVMKHRNLAKIPAYS 465
EE+ +R M+ + + K P S
Sbjct: 566 EEMASVRKSMRGKRIRKKPGCS 587
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 156/325 (48%), Gaps = 10/325 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
+N +I Y A+ ++ M + G D +TL ++ A C +++ +QLH +V
Sbjct: 108 YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLIKQLHCFSV 165
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPE-RKLGSWNAIIAGLSQDGRAKEAI 207
G +S + F++ YSK G +A VF E R SWN++I Q +A+
Sbjct: 166 SGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKAL 225
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
++ + GF+ D T+ SV +A SL L Q H + + Q S + + LID
Sbjct: 226 ALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH--VGSGLID 283
Query: 268 MYGKCGRMDLAY---KVFWEIDQPNVSSWTSMIVGYAAN-GLANEALDCFHYMRESGIRP 323
Y KCG D Y KVF EI P++ W +MI GY+ N L+ EA+ F M+ G RP
Sbjct: 284 FYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRP 343
Query: 324 NHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAM 383
+ +FV V SAC + + K + + R + ++ L ++G L++AR +
Sbjct: 344 DDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWV 403
Query: 384 VEGMPMKANVVIWGCLMGACEKFGN 408
+ MP + N V + C++ + G+
Sbjct: 404 FDRMP-ELNAVSFNCMIKGYAQHGH 427
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 36/243 (14%)
Query: 137 LEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKAR-------------------- 176
L G+ LH+L V+ + S+ + + F++LYSK G AR
Sbjct: 24 LFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 177 -----------KVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTM 225
++FDE P+ S+N +I+G + A+ +F ++K GFE D T+
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 226 VSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEI 285
+ +AC ++L Q+H F V S + + N+ + Y K G + A VF+ +
Sbjct: 144 SGLIAAC--CDRVDLIKQLH--CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 286 DQ-PNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEG 344
D+ + SW SMIV Y + +AL + M G + + T VL+A + G
Sbjct: 200 DELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 345 KHF 347
+ F
Sbjct: 260 RQF 262
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 75/197 (38%), Gaps = 45/197 (22%)
Query: 251 VKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFW--------------------------- 283
VKS S T + N +++Y KCGR+ A F+
Sbjct: 35 VKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIAR 94
Query: 284 ----EIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGG 339
EI QP+ S+ ++I GYA A+ F MR+ G + T G+++AC
Sbjct: 95 QLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRV 154
Query: 340 KVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEARAMVEGMPMKANVVI 395
+ + H F + F Y V + GLL EA ++ GM + V
Sbjct: 155 DLIKQLHCF-------SVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 396 WGCLMGACEKFGNVKMG 412
W ++ A +G K G
Sbjct: 208 WNSMIVA---YGQHKEG 221
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 259 bits (663), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 234/415 (56%), Gaps = 10/415 (2%)
Query: 47 HEDPAKIVATQLSKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKAL 106
+E A +KC +L +++ H IR+ ++S WN +I + + P+ +L
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVF-HGIRSKTVNS------WNALIGGHAQSNDPRLSL 481
Query: 107 DIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLY 166
D ++ M +G+LPD +T+ +L A +L +L +G+++H +R LE + F +SLY
Sbjct: 482 DAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 167 SKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMV 226
G+ + +FD ++ L SWN +I G Q+G A+ +F + G + ++M+
Sbjct: 542 IHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 601
Query: 227 SVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEID 286
V AC L L L + H Y +K + D + SLIDMY K G + + KVF +
Sbjct: 602 PVFGACSLLPSLRLGREAHAYA--LKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK 659
Query: 287 QPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH 346
+ + +SW +MI+GY +GLA EA+ F M+ +G P+ +TF+GVL+AC H G + EG
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 719
Query: 347 FFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEA-RAMVEGMPMKANVVIWGCLMGACEK 405
+ + MK+ + ++P HY C++D+LGRAG L++A R + E M +A+V IW L+ +C
Sbjct: 720 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 779
Query: 406 FGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAK 460
N++MGE VA L ELEP YV+LSN+YA G WE+V ++R M +L K
Sbjct: 780 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRK 834
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 23/329 (6%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFM-SRAGVLPDCYTLPIVLKASCQLFALEIGRQLHS 145
F WN +I Y+R E + L+ +I M S +LPD +T P V+KA + + IG +H
Sbjct: 152 FQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHG 211
Query: 146 LAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKE 205
L V+ GL + F + +S Y G A ++FD PER L SWN++I S +G ++E
Sbjct: 212 LVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEE 271
Query: 206 AI----DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLM 261
+ +M F PD T+V+V C ++ L VH + VK + + ++
Sbjct: 272 SFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA--VKLRLDKELVL 329
Query: 262 LNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG- 320
N+L+DMY KCG + A +F + NV SW +M+ G++A G + D M G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 321 -IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNV--YQIEPRFAHY----GCMVDLLGR 373
++ + VT + + C H + F +K + Y ++ F + V +
Sbjct: 390 DVKADEVTILNAVPVCFH-------ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 374 AGLLEEARAMVEGMPMKANVVIWGCLMGA 402
G L A+ + G+ K V W L+G
Sbjct: 443 CGSLSYAQRVFHGIRSKT-VNSWNALIGG 470
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 9/264 (3%)
Query: 141 RQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQD 200
++LH +++ NE + F++ Y+K G A++VF + + SWNA+I G +Q
Sbjct: 415 KELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQS 474
Query: 201 GRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTL 260
+ ++D + +K G PD T+ S+ SAC L L L +VH ++ +++ + D
Sbjct: 475 NDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI--IRNWLERDLF 532
Query: 261 MLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESG 320
+ S++ +Y CG + +F ++ ++ SW ++I GY NG + AL F M G
Sbjct: 533 VYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG 592
Query: 321 IRPNHVTFVGVLSACVHGGKVQEGK--HFFEMMKNVYQIEPRFAHYGC-MVDLLGRAGLL 377
I+ ++ + V AC ++ G+ H + +K++ + + A C ++D+ + G +
Sbjct: 593 IQLCGISMMPVFGACSLLPSLRLGREAHAYA-LKHLLEDD---AFIACSLIDMYAKNGSI 648
Query: 378 EEARAMVEGMPMKANVVIWGCLMG 401
++ + G+ K+ +MG
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMG 672
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 124 LPIVLKASCQLFALEIGRQLHSLAV-RLGLESNEFCESGFISLYSKAGDFEKARKVFDEN 182
L ++L+AS + +E+GR++H L L +++ + I++Y+ G + +R VFD
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 183 PERKLGSWNAIIAGLSQDGRAKEAIDMFIGL-KKCGFEPDDVTMVSVTSACGSLGDLELA 241
+ L WNA+I+ S++ E ++ FI + PD T V AC + D+ +
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 242 LQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYA 301
L VH V VK+ D + N+L+ YG G + A ++F + + N+ SW SMI ++
Sbjct: 207 LAVHGLV--VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFS 264
Query: 302 ANGLANEALDCF-HYMRESG---IRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
NG + E+ M E+G P+ T V VL C ++ GK + ++
Sbjct: 265 DNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL-RL 323
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNV 409
+ ++D+ + G + A+ M+ M NVV W ++G G+
Sbjct: 324 DKELVLNNALMDMYSKCGCITNAQ-MIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>sp|P0C8Q7|PP369_ARATH Pentatricopeptide repeat-containing protein At5g08305
OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1
Length = 534
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 227/414 (54%), Gaps = 37/414 (8%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSL 146
+ WN +IR ++ P+K++ +YI M R G+LPD T P ++K+S +L ++G LH
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 147 AVRLGLESNEFCESGFISLY-------------------------------SKAGDFEKA 175
V+ GLE + F + I +Y +K+GD A
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 176 RKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGF-EPDDVTMVSVTSACGS 234
R VFDE ER + +W+++I G + G +A+++F + + G + ++VTMVSV AC
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWE--IDQPNVSS 292
LG L VH+Y+ V ++ SLIDMY KCG + A+ VF+ + + +
Sbjct: 254 LGALNRGKTVHRYILDVHLPLT--VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W ++I G A++G E+L FH MRES I P+ +TF+ +L+AC HGG V+E HFF+ +K
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLK 371
Query: 353 NVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMG 412
EP+ HY CMVD+L RAGL+++A + MP+K + G L+ C GN+++
Sbjct: 372 ES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 413 EWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYSL 466
E V K L EL+P +DG YV L+N+YA + +R M+ + + KI +S+
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSI 484
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 143/329 (43%), Gaps = 48/329 (14%)
Query: 127 VLKASCQLFALEIGR----------QLHSLAVRLGLESNEFCESGFISL--YSKAGDFEK 174
+LK+S L A I R ++H+L + LGL E S +S S +GD +
Sbjct: 1 MLKSSSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDY 60
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGS 234
A K + + WN +I G S +++I ++I + + G PD +T + +
Sbjct: 61 AYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSR 120
Query: 235 LGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYG------------------------ 270
L + +L +H V VKS + D + N+LI MYG
Sbjct: 121 LSNRKLGGSLHCSV--VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWN 178
Query: 271 -------KCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCF-HYMRESGIR 322
K G + A VF E+ + +V +W+SMI GY G N+AL+ F MR +
Sbjct: 179 SILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSK 238
Query: 323 PNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARA 382
N VT V V+ AC H G + GK + +V+ + ++D+ + G + +A +
Sbjct: 239 ANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 383 MVEGMPMK-ANVVIWGCLMGACEKFGNVK 410
+ +K + ++W ++G G ++
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIR 326
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 17/197 (8%)
Query: 257 SDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYM 316
S TL ++L G +D AYK ++ P W +I G++ + +++ + M
Sbjct: 44 SQTLSFSAL----SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQM 99
Query: 317 RESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGC--MVDLLGRA 374
G+ P+H+T+ ++ + ++ K + +V + + + C ++ + G
Sbjct: 100 LRFGLLPDHMTYPFLMKS---SSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSF 156
Query: 375 GLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELE--PWSDGAYVV 432
AR + + MP K N+V W ++ A K G+V V + E + WS
Sbjct: 157 RDQASARKLFDEMPHK-NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSS----- 210
Query: 433 LSNIYASRGLWEEVERI 449
+ + Y RG + + I
Sbjct: 211 MIDGYVKRGEYNKALEI 227
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 258 bits (659), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/408 (34%), Positives = 226/408 (55%), Gaps = 10/408 (2%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
SKC +L ++ + S + + ++I Y R +A+ ++ M G+
Sbjct: 342 SKCGDLDSAKAVFREM-------SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
PD YT+ VL + L+ G+++H L + F + + +Y+K G ++A V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMF-IGLKKCGFEPDDVTMVSVTSACGSLGD 237
F E + + SWN II G S++ A EA+ +F + L++ F PD+ T+ V AC SL
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 238 LELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMI 297
+ ++H Y+ +++ SD + NSL+DMY KCG + LA+ +F +I ++ SWT MI
Sbjct: 515 FDKGREIHGYI--MRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMI 572
Query: 298 VGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQI 357
GY +G EA+ F+ MR++GI + ++FV +L AC H G V EG FF +M++ +I
Sbjct: 573 AGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI 632
Query: 358 EPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAK 417
EP HY C+VD+L R G L +A +E MP+ + IWG L+ C +VK+ E VA+
Sbjct: 633 EPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAE 692
Query: 418 HLQELEPWSDGAYVVLSNIYASRGLWEEVERIRAVMKHRNLAKIPAYS 465
+ ELEP + G YV+++NIYA WE+V+R+R + R L K P S
Sbjct: 693 KVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 166/347 (47%), Gaps = 11/347 (3%)
Query: 59 SKCTNLLQLNQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVL 118
+ C +L + ++++ + A WN ++ + ++ ++ M +GV
Sbjct: 140 TNCGDLKEASRVFDEV-------KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 119 PDCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKV 178
D YT V K+ L ++ G QLH ++ G + ++ Y K + ARKV
Sbjct: 193 MDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKV 252
Query: 179 FDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDL 238
FDE ER + SWN+II G +G A++ + +F+ + G E D T+VSV + C +
Sbjct: 253 FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLI 312
Query: 239 ELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIV 298
L VH VK+ + N+L+DMY KCG +D A VF E+ +V S+TSMI
Sbjct: 313 SLGRAVHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIA 370
Query: 299 GYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIE 358
GYA GLA EA+ F M E GI P+ T VL+ C + EGK E +K
Sbjct: 371 GYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK 405
F M D+ + G ++EA + M +K +++ W ++G K
Sbjct: 431 DIFVSNALM-DMYAKCGSMQEAELVFSEMRVK-DIISWNTIIGGYSK 475
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 185/371 (49%), Gaps = 10/371 (2%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN+II Y +K L +++ M +G+ D T+ V + +GR +HS+ V
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGV 323
Query: 149 RLGL-ESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAI 207
+ + FC + + +YSK GD + A+ VF E +R + S+ ++IAG +++G A EA+
Sbjct: 324 KACFSREDRFCNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 208 DMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLID 267
+F +++ G PD T+ +V + C L+ +VH+++ + + D + N+L+D
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE--NDLGFDIFVSNALMD 440
Query: 268 MYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFH-YMRESGIRPNHV 326
MY KCG M A VF E+ ++ SW ++I GY+ N ANEAL F+ + E P+
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 327 TFVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVE 385
T VL AC +G+ +M+N Y + A+ +VD+ + G L A + +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFD 558
Query: 386 GMPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDG-AYVVLSNIYASRGLWE 444
+ K ++V W ++ G K + +++ +D ++V L + GL +
Sbjct: 559 DIASK-DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 445 EVERIRAVMKH 455
E R +M+H
Sbjct: 618 EGWRFFNIMRH 628
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 164/345 (47%), Gaps = 13/345 (3%)
Query: 120 DCYTLPIVLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVF 179
D TL VL+ +L+ G+++ + G + S +Y+ GD ++A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 180 DENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLE 239
DE K WN ++ L++ G +I +F + G E D T V+ + SL +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 240 LALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVG 299
Q+H ++ + +++ + NSL+ Y K R+D A KVF E+ + +V SW S+I G
Sbjct: 213 GGEQLHGFILKSGFGERNS--VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIING 270
Query: 300 YAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEM-MKNVYQIE 358
Y +NGLA + L F M SGI + T V V + C + G+ + +K + E
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 359 PRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGNVKMGEWVAKH 418
RF + ++D+ + G L+ A+A+ M ++ VV + ++ + G GE V K
Sbjct: 331 DRFCN--TLLDMYSKCGDLDSAKAVFREMSDRS-VVSYTSMIAGYAREG--LAGEAV-KL 384
Query: 419 LQELEP--WSDGAYVVLS--NIYASRGLWEEVERIRAVMKHRNLA 459
+E+E S Y V + N A L +E +R+ +K +L
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 258 bits (659), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 209/377 (55%), Gaps = 2/377 (0%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I YT+ KAL + M G+ D L + A L AL+ G+Q+H+ A
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
G S+ ++ ++LYS+ G E++ F++ +WNA+++G Q G +EA+
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F+ + + G + ++ T S A +++ QVH + K+ S+T + N+LI M
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI--TKTGYDSETEVCNALISM 736
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KCG + A K F E+ N SW ++I Y+ +G +EALD F M S +RPNHVT
Sbjct: 737 YAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTL 796
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VGVLSAC H G V +G +FE M + Y + P+ HY C+VD+L RAGLL A+ ++ MP
Sbjct: 797 VGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMP 856
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEVER 448
+K + ++W L+ AC N+++GE+ A HL ELEP YV+LSN+YA W+ +
Sbjct: 857 IKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDL 916
Query: 449 IRAVMKHRNLAKIPAYS 465
R MK + + K P S
Sbjct: 917 TRQKMKEKGVKKEPGQS 933
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 157/321 (48%), Gaps = 10/321 (3%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I ++ E +A+ ++ M G++P Y VL A ++ +LEIG QLH L +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL 315
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+LG S+ + + +SLY G+ A +F +R ++N +I GLSQ G ++A++
Sbjct: 316 KLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAME 375
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F + G EPD T+ S+ AC + G L Q+H Y K S+ + +L+++
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT--TKLGFASNNKIEGALLNL 433
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y KC ++ A F E + NV W M+V Y + F M+ I PN T+
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 329 VGVLSACVHGGKVQEGKHFF-EMMKNVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVE 385
+L C+ G ++ G+ +++K +Q+ Y C ++D+ + G L+ A ++
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDILI 549
Query: 386 GMPMKANVVIWGCLMGACEKF 406
K +VV W ++ ++
Sbjct: 550 RFAGK-DVVSWTTMIAGYTQY 569
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 154/341 (45%), Gaps = 6/341 (1%)
Query: 68 NQIYAHIIRTHMLHSYSAAFHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIV 127
N I A I ++M S A +N +I ++ +KA++++ M G+ PD TL +
Sbjct: 338 NLISAEHIFSNM--SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 128 LKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKL 187
+ A L G+QLH+ +LG SN E ++LY+K D E A F E +
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 188 GSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKY 247
WN ++ + + +F ++ P+ T S+ C LGDLEL Q+H
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 248 VFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLAN 307
+ +K+ + + + + LIDMY K G++D A+ + +V SWT+MI GY +
Sbjct: 516 I--IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDD 573
Query: 308 EALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCM 367
+AL F M + GIR + V +SAC ++EG+ V +
Sbjct: 574 KALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNAL 632
Query: 368 VDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFGN 408
V L R G +EE+ E N+ W L+ ++ GN
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNIA-WNALVSGFQQSGN 672
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 6/320 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN ++ Y L+ + + I+ M ++P+ YT P +LK +L LE+G Q+HS +
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + N + S I +Y+K G + A + + + SW +IAG +Q +A+
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT 577
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
F + G D+V + + SAC L L+ Q+H S SD N+L+ +
Sbjct: 578 TFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA--CVSGFSSDLPFQNALVTL 635
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
Y +CG+++ +Y F + + + +W +++ G+ +G EAL F M GI N+ TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 329 VGVLSACVHGGKVQEGKHFFEMM-KNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGM 387
+ A +++GK ++ K Y E + ++ + + G + +A +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN--ALISMYAKCGSISDAEKQFLEV 753
Query: 388 PMKANVVIWGCLMGACEKFG 407
K N V W ++ A K G
Sbjct: 754 STK-NEVSWNAIINAYSKHG 772
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 149/319 (46%), Gaps = 14/319 (4%)
Query: 116 GVLPDCYTLPIVLKASCQLF-ALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEK 174
G+ P+ TL +L+ + +L+ GR+LHS ++LGL+SN Y GD
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 175 ARKVFDENPERKLGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSAC-- 232
A KVFDE PER + +WN +I L+ E +F+ + P++ T V AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 233 GSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSS 292
GS+ ++ Q+H + + + T++ N LID+Y + G +DLA +VF + + SS
Sbjct: 199 GSVA-FDVVEQIHARI--LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSS 255
Query: 293 WTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMK 352
W +MI G + N EA+ F M GI P F VLSAC ++ G+ +
Sbjct: 256 WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGL-- 313
Query: 353 NVYQIEPRFAHYGC--MVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEK--FGN 408
V ++ Y C +V L G L A + M + + V + L+ + +G
Sbjct: 314 -VLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR-DAVTYNTLINGLSQCGYGE 371
Query: 409 VKMGEWVAKHLQELEPWSD 427
M + HL LEP S+
Sbjct: 372 KAMELFKRMHLDGLEPDSN 390
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 15/322 (4%)
Query: 87 FHWNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQ--LFALEIGRQLH 144
F WN +I+ + +++ M V P+ T VL+A C+ A ++ Q+H
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 145 SLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAK 204
+ + GL + + I LYS+ G + AR+VFD + SW A+I+GLS++
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 205 EAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNS 264
EAI +F + G P SV SAC + LE+ Q+H V ++ SDT + N+
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF--SSDTYVCNA 328
Query: 265 LIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPN 324
L+ +Y G + A +F + Q + ++ ++I G + G +A++ F M G+ P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 325 HVTFVGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHY----GCMVDLLGRAGLLEEA 380
T ++ AC G + G+ + Y + FA G +++L + +E A
Sbjct: 389 SNTLASLVVACSADGTLFRGQQL-----HAYTTKLGFASNNKIEGALLNLYAKCADIETA 443
Query: 381 RAMVEGMPMKANVVIWGCLMGA 402
++ NVV+W ++ A
Sbjct: 444 LDYFLETEVE-NVVLWNVMLVA 464
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 258 bits (658), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
W +I Y++ +AL ++ M R+ P+ +T VL + + L +G+Q+H L V
Sbjct: 121 WTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIV 180
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ +S+ F S + +Y+KAG ++AR++F+ PER + S AIIAG +Q G +EA++
Sbjct: 181 KWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALE 240
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
MF L G P+ VT S+ +A L L+ Q H +V ++ + ++ NSLIDM
Sbjct: 241 MFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV--LRRELPFYAVLQNSLIDM 298
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMR-ESGIRPNHVT 327
Y KCG + A ++F + + SW +M+VGY+ +GL E L+ F MR E ++P+ VT
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 328 FVGVLSACVHGGKVQEGKHFFE-MMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEG 386
+ VLS C HG G + F+ M+ Y +P HYGC+VD+LGRAG ++EA ++
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 387 MPMKANVVIWGCLMGACEKFGNVKMGEWVAKHLQELEPWSDGAYVVLSNIYASRGLWEEV 446
MP K + G L+GAC +V +GE V + L E+EP + G YV+LSN+YAS G W +V
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 447 ERIRAVMKHRNLAKIPAYS 465
+RA+M + + K P S
Sbjct: 479 NNVRAMMMQKAVTKEPGRS 497
Score = 129 bits (323), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 26/292 (8%)
Query: 127 VLKASCQLFALEIGRQLHSLAVRLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERK 186
+L A AL G+++H+ ++ + + + Y K E ARKV DE PE+
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 187 LGSWNAIIAGLSQDGRAKEAIDMFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHK 246
+ SW A+I+ SQ G + EA+ +F + + +P++ T +V ++C L L Q+H
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHG 177
Query: 247 YVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLA 306
+ VK S + +SL+DMY K G++ A ++F + + +V S T++I GYA GL
Sbjct: 178 LI--VKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 307 NEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKH-----------FFEMMKNVY 355
EAL+ FH + G+ PN+VT+ +L+A + GK F+ +++N
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN-- 293
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMGACEKFG 407
++D+ + G L AR + + MP + + W ++ K G
Sbjct: 294 ----------SLIDMYSKCGNLSYARRLFDNMPER-TAISWNAMLVGYSKHG 334
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 8/226 (3%)
Query: 177 KVFDENPERKLGSWNAIIAGLSQDGRAKEAI-DMFIGLKKCGFEPDDVTMVSVTSACGSL 235
+ F +P + I+ L +GR +EA+ +M + + GF D ++ +AC
Sbjct: 10 RSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYD----ALLNACLDK 65
Query: 236 GDLELALQVHKYVFQVKSKQKSDTLMLNSLIDMYGKCGRMDLAYKVFWEIDQPNVSSWTS 295
L +VH ++ +K++ T + L+ YGKC ++ A KV E+ + NV SWT+
Sbjct: 66 RALRDGQRVHAHM--IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTA 123
Query: 296 MIVGYAANGLANEALDCFHYMRESGIRPNHVTFVGVLSACVHGGKVQEGKHFFEMMKNVY 355
MI Y+ G ++EAL F M S +PN TF VL++C+ + GK ++ +
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK-W 182
Query: 356 QIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMPMKANVVIWGCLMG 401
+ ++D+ +AG ++EAR + E +P + V + G
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAG 228
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 257 bits (657), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 217/378 (57%), Gaps = 6/378 (1%)
Query: 89 WNNIIRLYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
WN++I Y+ K A+D++ M G PD TL +L A L L GR L +A+
Sbjct: 201 WNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
+ + F S IS+Y K GD + AR+VF++ ++ +W A+I SQ+G++ EA
Sbjct: 261 TKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFK 320
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F ++K G PD T+ +V SACGS+G LEL Q+ + ++ + + + L+DM
Sbjct: 321 LFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH--NIYVATGLVDM 378
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCGR++ A +VF + N ++W +MI YA G A EAL F M + P+ +TF
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITF 435
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
+GVLSACVH G V +G +F M +++ + P+ HY ++DLL RAG+L+EA +E P
Sbjct: 436 IGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
Query: 389 MKANVVIWGCLMGACEKFGNVKMGEWVAKHLQEL-EPWSDGAYVVLSNIYASRGLWEEVE 447
K + ++ ++GAC K +V + E + L E+ E + G YV+ SN+ A +W+E
Sbjct: 496 GKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESA 555
Query: 448 RIRAVMKHRNLAKIPAYS 465
++RA+M+ R + K P S
Sbjct: 556 KMRALMRDRGVVKTPGCS 573
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 196/382 (51%), Gaps = 37/382 (9%)
Query: 58 LSKCTNLLQLNQIYAHIIRTHMLHS------------------YSA----------AFHW 89
L KC ++ QL QI A ++ LHS YS+ + +
Sbjct: 44 LKKCISVNQLRQIQAQML----LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPNHYSF 99
Query: 90 NNIIR-LYTRLEAPKKALDIYIFMSRAGVLPDCYTLPIVLKASCQLFALEIGRQLHSLAV 148
N +IR L + AL +Y M +G+ PD +T V A +L + +GR +HS
Sbjct: 100 NYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLF 159
Query: 149 RLGLESNEFCESGFISLYSKAGDFEKARKVFDENPERKLGSWNAIIAGLSQDGRAKEAID 208
++GLE + I +Y+K G ARK+FDE ER SWN++I+G S+ G AK+A+D
Sbjct: 160 KVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMD 219
Query: 209 MFIGLKKCGFEPDDVTMVSVTSACGSLGDLELALQVHKYVFQVKSKQKSDTLMLNSLIDM 268
+F +++ GFEPD+ T+VS+ AC LGDL + + + K T + + LI M
Sbjct: 220 LFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEE--MAITKKIGLSTFLGSKLISM 277
Query: 269 YGKCGRMDLAYKVFWEIDQPNVSSWTSMIVGYAANGLANEALDCFHYMRESGIRPNHVTF 328
YGKCG +D A +VF ++ + + +WT+MI Y+ NG ++EA F M ++G+ P+ T
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 329 VGVLSACVHGGKVQEGKHFFEMMKNVYQIEPRFAHYGCMVDLLGRAGLLEEARAMVEGMP 388
VLSAC G ++ GK E + ++ +VD+ G+ G +EEA + E MP
Sbjct: 338 STVLSACGSVGALELGKQ-IETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMP 396
Query: 389 MKANVVIWGCLMGACEKFGNVK 410
+K N W ++ A G+ K
Sbjct: 397 VK-NEATWNAMITAYAHQGHAK 417
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,217,716
Number of Sequences: 539616
Number of extensions: 6809788
Number of successful extensions: 20775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 15162
Number of HSP's gapped (non-prelim): 1929
length of query: 471
length of database: 191,569,459
effective HSP length: 121
effective length of query: 350
effective length of database: 126,275,923
effective search space: 44196573050
effective search space used: 44196573050
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)