Query 012104
Match_columns 471
No_of_seqs 326 out of 3129
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 08:40:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012104.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012104hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 4E-117 8E-122 823.9 40.5 458 4-463 13-476 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 2E-109 4E-114 786.9 41.3 408 10-461 5-413 (413)
3 PLN02271 serine hydroxymethylt 100.0 2E-100 4E-105 770.2 45.2 458 6-463 123-585 (586)
4 PF00464 SHMT: Serine hydroxym 100.0 2.8E-93 6.1E-98 703.4 29.3 399 12-412 1-399 (399)
5 PLN03226 serine hydroxymethylt 100.0 2E-83 4.4E-88 658.6 45.1 465 5-471 8-475 (475)
6 PRK13580 serine hydroxymethylt 100.0 1.1E-81 2.3E-86 633.4 41.4 430 10-467 28-493 (493)
7 PTZ00094 serine hydroxymethylt 100.0 1.2E-66 2.6E-71 536.8 45.8 441 9-462 12-452 (452)
8 PRK13034 serine hydroxymethylt 100.0 2.7E-59 5.9E-64 476.5 43.6 412 7-460 4-416 (416)
9 PRK00011 glyA serine hydroxyme 100.0 3E-52 6.4E-57 427.2 43.9 413 7-461 1-414 (416)
10 cd00378 SHMT Serine-glycine hy 100.0 2.3E-49 5E-54 404.2 42.0 400 14-453 2-402 (402)
11 COG0520 csdA Selenocysteine ly 100.0 2.9E-30 6.4E-35 259.8 33.3 355 40-417 31-404 (405)
12 COG1168 MalY Bifunctional PLP- 100.0 1.1E-29 2.4E-34 241.8 31.7 342 31-414 25-386 (388)
13 cd06451 AGAT_like Alanine-glyo 100.0 2.5E-29 5.4E-34 252.4 33.6 344 34-416 1-355 (356)
14 COG1104 NifS Cysteine sulfinat 100.0 3.1E-29 6.6E-34 243.6 28.8 339 39-420 9-379 (386)
15 COG0436 Aspartate/tyrosine/aro 100.0 1.5E-28 3.3E-33 247.7 33.9 340 32-416 29-389 (393)
16 PRK13238 tnaA tryptophanase/L- 100.0 1.4E-27 3E-32 245.3 31.8 343 31-422 36-437 (460)
17 PRK10874 cysteine sulfinate de 100.0 2.6E-27 5.5E-32 241.7 32.9 358 33-418 20-398 (401)
18 COG0075 Serine-pyruvate aminot 100.0 4.7E-27 1E-31 230.1 31.3 350 33-420 6-365 (383)
19 TIGR03392 FeS_syn_CsdA cystein 100.0 6.5E-27 1.4E-31 238.5 33.8 358 34-418 18-395 (398)
20 PLN02409 serine--glyoxylate am 100.0 7.6E-27 1.6E-31 237.7 34.0 348 33-419 10-373 (401)
21 PRK09295 bifunctional cysteine 100.0 5.4E-27 1.2E-31 239.6 32.1 357 34-417 25-403 (406)
22 TIGR02326 transamin_PhnW 2-ami 100.0 1.6E-26 3.4E-31 232.8 34.0 345 32-416 3-360 (363)
23 TIGR01822 2am3keto_CoA 2-amino 100.0 9.8E-27 2.1E-31 236.8 31.5 332 32-417 39-388 (393)
24 TIGR01979 sufS cysteine desulf 100.0 2.7E-26 5.8E-31 234.3 33.7 358 34-417 20-400 (403)
25 cd06453 SufS_like Cysteine des 100.0 1.1E-26 2.3E-31 234.8 30.2 350 38-412 6-373 (373)
26 TIGR03402 FeS_nifS cysteine de 100.0 2.3E-26 5E-31 232.9 31.9 341 38-418 6-372 (379)
27 PLN02855 Bifunctional selenocy 100.0 1.8E-26 4E-31 237.0 31.2 356 38-419 39-419 (424)
28 PLN00175 aminotransferase fami 100.0 7.6E-26 1.6E-30 231.1 35.4 361 10-416 34-411 (413)
29 PF00266 Aminotran_5: Aminotra 100.0 3.3E-26 7.1E-31 231.1 31.6 346 37-408 5-371 (371)
30 TIGR01977 am_tr_V_EF2568 cyste 100.0 5.5E-26 1.2E-30 229.9 31.7 346 43-414 12-375 (376)
31 PRK07179 hypothetical protein; 100.0 7.1E-26 1.5E-30 231.4 32.8 328 37-419 59-399 (407)
32 TIGR01976 am_tr_V_VC1184 cyste 100.0 5.9E-26 1.3E-30 231.3 31.7 343 37-412 23-397 (397)
33 PRK02948 cysteine desulfurase; 100.0 5.3E-26 1.1E-30 230.4 31.0 341 38-418 7-374 (381)
34 COG0156 BioF 7-keto-8-aminopel 100.0 4.2E-26 9.2E-31 225.5 29.3 327 34-415 42-387 (388)
35 PRK13479 2-aminoethylphosphona 100.0 3.6E-25 7.8E-30 223.3 33.4 345 34-418 7-363 (368)
36 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 3.5E-25 7.6E-30 224.6 32.7 332 32-418 19-381 (387)
37 PRK08960 hypothetical protein; 99.9 8.4E-25 1.8E-29 222.0 35.4 344 10-393 7-368 (387)
38 cd00617 Tnase_like Tryptophana 99.9 5.1E-25 1.1E-29 223.4 33.4 311 70-422 50-412 (431)
39 cd06454 KBL_like KBL_like; thi 99.9 3.2E-25 7E-30 221.8 30.2 319 44-415 17-348 (349)
40 TIGR03403 nifS_epsilon cystein 99.9 7.2E-25 1.6E-29 222.2 32.5 339 38-418 6-375 (382)
41 PRK12414 putative aminotransfe 99.9 1.7E-24 3.6E-29 219.6 34.8 354 12-412 11-381 (384)
42 PRK07309 aromatic amino acid a 99.9 2.4E-24 5.1E-29 219.0 35.9 369 1-417 1-387 (391)
43 PLN02651 cysteine desulfurase 99.9 2.5E-25 5.5E-30 224.0 28.0 327 38-405 6-363 (364)
44 PRK07681 aspartate aminotransf 99.9 2.5E-24 5.4E-29 219.4 35.0 335 31-414 32-384 (399)
45 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.3E-24 2.8E-29 217.9 32.3 342 35-416 2-355 (355)
46 PRK05957 aspartate aminotransf 99.9 1.9E-24 4E-29 219.6 33.6 354 15-416 11-383 (389)
47 PRK09082 methionine aminotrans 99.9 1.1E-24 2.4E-29 221.0 31.7 357 10-413 10-384 (386)
48 PRK08361 aspartate aminotransf 99.9 1.6E-24 3.5E-29 220.3 32.9 338 31-416 33-388 (391)
49 PRK06939 2-amino-3-ketobutyrat 99.9 1.2E-24 2.5E-29 221.7 31.1 334 32-418 43-393 (397)
50 PRK07682 hypothetical protein; 99.9 2.6E-24 5.6E-29 217.8 33.3 339 31-417 20-375 (378)
51 PRK06348 aspartate aminotransf 99.9 3.8E-24 8.3E-29 216.9 34.4 360 5-413 3-380 (384)
52 PRK07777 aminotransferase; Val 99.9 6.9E-24 1.5E-28 215.4 35.7 358 12-414 6-382 (387)
53 TIGR03540 DapC_direct LL-diami 99.9 9.7E-24 2.1E-28 214.0 36.6 322 30-393 28-367 (383)
54 TIGR00858 bioF 8-amino-7-oxono 99.9 1.4E-24 2.9E-29 218.1 29.9 328 31-412 16-359 (360)
55 PRK08912 hypothetical protein; 99.9 5.4E-24 1.2E-28 216.1 34.4 359 11-416 7-384 (387)
56 PRK06108 aspartate aminotransf 99.9 6.7E-24 1.4E-28 215.1 35.0 336 30-416 23-380 (382)
57 PRK06207 aspartate aminotransf 99.9 7.4E-24 1.6E-28 216.1 35.0 340 31-417 39-401 (405)
58 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.4E-24 7.4E-29 216.1 32.1 328 32-417 7-367 (370)
59 COG0399 WecE Predicted pyridox 99.9 1.5E-24 3.2E-29 212.9 28.5 326 41-417 11-372 (374)
60 PRK06290 aspartate aminotransf 99.9 9.3E-24 2E-28 215.3 35.5 354 15-418 22-405 (410)
61 TIGR02006 IscS cysteine desulf 99.9 2.5E-24 5.5E-29 219.5 31.1 340 38-419 10-378 (402)
62 PRK07337 aminotransferase; Val 99.9 7.1E-24 1.5E-28 215.4 33.9 338 31-414 30-385 (388)
63 TIGR03235 DNA_S_dndA cysteine 99.9 1.5E-24 3.3E-29 217.5 28.4 304 38-378 5-325 (353)
64 PRK06225 aspartate aminotransf 99.9 1.7E-23 3.6E-28 212.0 35.5 336 30-418 27-376 (380)
65 PRK07366 succinyldiaminopimela 99.9 1.3E-23 2.7E-28 213.6 33.8 337 30-414 29-386 (388)
66 COG1167 ARO8 Transcriptional r 99.9 3.7E-24 8E-29 220.5 29.9 303 77-418 136-455 (459)
67 PRK13520 L-tyrosine decarboxyl 99.9 1.9E-23 4.1E-28 210.9 34.1 346 16-417 4-370 (371)
68 PLN00145 tyrosine/nicotianamin 99.9 1.4E-23 3.1E-28 215.3 33.2 347 31-417 52-423 (430)
69 PLN02483 serine palmitoyltrans 99.9 9.6E-24 2.1E-28 219.1 32.0 336 31-418 100-466 (489)
70 PLN02187 rooty/superroot1 99.9 1.1E-23 2.4E-28 217.6 32.0 343 31-417 66-437 (462)
71 PRK08636 aspartate aminotransf 99.9 4.5E-23 9.6E-28 210.5 35.8 340 31-417 33-399 (403)
72 TIGR01437 selA_rel uncharacter 99.9 2E-23 4.3E-28 209.5 32.3 312 39-416 21-363 (363)
73 PRK07683 aminotransferase A; V 99.9 4.5E-23 9.8E-28 209.3 35.4 339 30-417 27-382 (387)
74 PRK05958 8-amino-7-oxononanoat 99.9 1.6E-23 3.5E-28 212.4 31.9 331 31-415 39-384 (385)
75 PRK08068 transaminase; Reviewe 99.9 5E-23 1.1E-27 209.2 35.3 320 31-392 32-369 (389)
76 PLN03227 serine palmitoyltrans 99.9 1.1E-23 2.3E-28 213.5 30.0 332 38-418 4-382 (392)
77 PRK05942 aspartate aminotransf 99.9 4.7E-23 1E-27 209.7 34.7 334 31-415 35-386 (394)
78 TIGR03588 PseC UDP-4-keto-6-de 99.9 9E-24 1.9E-28 213.9 29.2 322 43-416 8-380 (380)
79 PRK09276 LL-diaminopimelate am 99.9 6.6E-23 1.4E-27 208.1 35.5 341 11-393 7-369 (385)
80 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 3.6E-23 7.8E-28 208.2 33.0 322 35-416 5-360 (361)
81 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.9E-24 1.1E-28 213.6 26.3 293 74-413 19-352 (352)
82 TIGR01814 kynureninase kynuren 99.9 2.2E-23 4.7E-28 213.0 31.4 351 32-416 27-405 (406)
83 PRK14807 histidinol-phosphate 99.9 4.1E-23 8.9E-28 206.9 32.2 318 32-416 23-350 (351)
84 PRK11658 UDP-4-amino-4-deoxy-L 99.9 7.6E-24 1.7E-28 214.0 27.1 325 42-416 11-377 (379)
85 PLN02656 tyrosine transaminase 99.9 4.1E-23 9E-28 211.0 32.8 348 29-417 29-402 (409)
86 PLN02955 8-amino-7-oxononanoat 99.9 1.1E-23 2.4E-28 213.0 27.7 328 33-418 103-461 (476)
87 PRK08363 alanine aminotransfer 99.9 1.2E-22 2.6E-27 207.0 35.5 341 31-417 30-393 (398)
88 PRK04870 histidinol-phosphate 99.9 1.8E-23 3.9E-28 209.9 28.9 321 31-415 26-355 (356)
89 TIGR03537 DapC succinyldiamino 99.9 4.1E-23 8.8E-28 206.9 31.3 320 43-413 14-348 (350)
90 PRK05764 aspartate aminotransf 99.9 1.6E-22 3.5E-27 205.8 35.6 337 31-417 31-390 (393)
91 PRK13355 bifunctional HTH-doma 99.9 5.5E-23 1.2E-27 215.9 32.7 362 9-417 120-513 (517)
92 KOG0257 Kynurenine aminotransf 99.9 1.9E-23 4.1E-28 201.3 26.6 303 9-351 9-344 (420)
93 PRK14012 cysteine desulfurase; 99.9 3.4E-23 7.3E-28 211.5 30.3 340 38-419 10-380 (404)
94 PRK07324 transaminase; Validat 99.9 1.6E-23 3.4E-28 211.5 27.4 287 84-416 69-368 (373)
95 TIGR01265 tyr_nico_aTase tyros 99.9 1.7E-22 3.8E-27 206.1 35.4 339 30-416 30-399 (403)
96 PLN00143 tyrosine/nicotianamin 99.9 5.2E-23 1.1E-27 210.2 30.7 345 30-417 31-403 (409)
97 TIGR01821 5aminolev_synth 5-am 99.9 4E-23 8.7E-28 210.8 29.7 329 36-418 49-396 (402)
98 PRK13392 5-aminolevulinate syn 99.9 4.2E-23 9.1E-28 211.2 29.6 329 36-418 50-397 (410)
99 PRK06855 aminotransferase; Val 99.9 1.9E-22 4E-27 207.4 34.4 348 32-418 33-429 (433)
100 PRK07550 hypothetical protein; 99.9 3.3E-22 7.2E-27 203.0 35.9 336 31-414 29-383 (386)
101 PRK03317 histidinol-phosphate 99.9 6.4E-23 1.4E-27 206.9 30.4 323 32-417 27-363 (368)
102 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.2E-22 4.9E-27 203.3 34.2 317 43-414 32-372 (373)
103 PLN02822 serine palmitoyltrans 99.9 1.2E-22 2.6E-27 210.4 32.5 335 32-418 110-477 (481)
104 PLN03026 histidinol-phosphate 99.9 8.5E-23 1.8E-27 206.6 30.6 318 31-415 52-379 (380)
105 KOG2862 Alanine-glyoxylate ami 99.9 7.3E-23 1.6E-27 189.0 26.8 346 35-418 20-382 (385)
106 PRK06107 aspartate aminotransf 99.9 2.2E-22 4.9E-27 205.2 33.2 336 31-417 33-399 (402)
107 TIGR01264 tyr_amTase_E tyrosin 99.9 2.8E-22 6.1E-27 204.5 33.9 336 31-416 31-397 (401)
108 PRK09064 5-aminolevulinate syn 99.9 1.2E-22 2.6E-27 207.6 31.1 330 35-418 49-397 (407)
109 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.4E-22 3.1E-27 205.6 31.3 335 31-418 33-381 (385)
110 PRK02731 histidinol-phosphate 99.9 6.8E-23 1.5E-27 206.7 28.4 320 31-417 32-365 (367)
111 cd00613 GDC-P Glycine cleavage 99.9 2.2E-22 4.8E-27 205.1 31.9 309 77-412 64-398 (398)
112 PRK13237 tyrosine phenol-lyase 99.9 1.9E-22 4.1E-27 202.0 30.5 313 68-422 73-437 (460)
113 TIGR03538 DapC_gpp succinyldia 99.9 4.2E-22 9E-27 202.7 33.3 334 30-414 27-391 (393)
114 TIGR01141 hisC histidinol-phos 99.9 7.9E-23 1.7E-27 204.5 27.4 314 32-412 20-345 (346)
115 PRK05387 histidinol-phosphate 99.9 1.5E-22 3.3E-27 203.0 29.4 318 31-417 24-352 (353)
116 PLN02721 threonine aldolase 99.9 2.4E-22 5.2E-27 201.5 30.8 323 34-417 8-351 (353)
117 PRK09147 succinyldiaminopimela 99.9 7.1E-22 1.5E-26 201.2 34.4 335 31-416 29-394 (396)
118 PTZ00433 tyrosine aminotransfe 99.9 6.6E-22 1.4E-26 202.4 34.1 344 29-418 31-408 (412)
119 PRK08153 histidinol-phosphate 99.9 3.2E-22 6.9E-27 201.7 31.2 321 32-418 33-365 (369)
120 PRK15481 transcriptional regul 99.9 1.8E-22 3.9E-27 207.8 29.4 275 100-417 143-430 (431)
121 PRK08175 aminotransferase; Val 99.9 1.6E-21 3.5E-26 198.5 36.1 339 31-417 29-388 (395)
122 PRK03158 histidinol-phosphate 99.9 1.8E-22 3.8E-27 203.0 28.1 315 32-415 30-358 (359)
123 PTZ00377 alanine aminotransfer 99.9 3E-22 6.4E-27 208.7 30.6 303 75-417 117-474 (481)
124 PRK01533 histidinol-phosphate 99.9 1.4E-22 3.1E-27 203.7 27.2 313 31-418 29-355 (366)
125 PLN02231 alanine transaminase 99.9 4.6E-22 1E-26 207.9 32.0 360 13-415 112-524 (534)
126 PLN02450 1-aminocyclopropane-1 99.9 5.3E-22 1.2E-26 205.5 32.1 344 32-417 39-429 (468)
127 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.8E-22 6.1E-27 199.4 28.8 302 44-416 35-345 (346)
128 PRK13393 5-aminolevulinate syn 99.9 5.2E-22 1.1E-26 202.8 31.4 331 35-419 48-397 (406)
129 PRK09148 aminotransferase; Val 99.9 2.3E-21 4.9E-26 197.9 36.0 340 31-418 30-390 (405)
130 PRK07590 L,L-diaminopimelate a 99.9 1.1E-21 2.4E-26 200.6 33.3 344 31-415 34-408 (409)
131 PLN02376 1-aminocyclopropane-1 99.9 7.6E-22 1.6E-26 205.1 31.7 341 32-417 47-437 (496)
132 PRK00950 histidinol-phosphate 99.9 3.6E-22 7.7E-27 200.9 28.2 316 32-416 35-360 (361)
133 PRK09265 aminotransferase AlaT 99.9 2.8E-21 6.1E-26 197.3 34.7 339 31-417 33-400 (404)
134 cd06502 TA_like Low-specificit 99.9 3.8E-22 8.2E-27 198.8 26.9 318 38-414 3-337 (338)
135 PRK05166 histidinol-phosphate 99.9 6.8E-22 1.5E-26 199.6 29.0 319 31-416 36-369 (371)
136 PRK07568 aspartate aminotransf 99.9 4.6E-21 1E-25 195.4 35.1 336 32-418 31-392 (397)
137 PRK04366 glycine dehydrogenase 99.9 2.2E-21 4.8E-26 201.3 32.6 340 40-419 79-449 (481)
138 KOG1549 Cysteine desulfurase N 99.9 4.7E-22 1E-26 194.1 25.7 347 32-419 43-419 (428)
139 PRK05355 3-phosphoserine/phosp 99.9 3.4E-22 7.4E-27 200.0 25.3 341 33-418 4-358 (360)
140 COG0079 HisC Histidinol-phosph 99.9 2.4E-21 5.3E-26 192.2 30.8 314 32-418 23-354 (356)
141 PRK02769 histidine decarboxyla 99.9 7.7E-21 1.7E-25 190.8 34.6 322 45-418 36-372 (380)
142 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.2E-21 2.6E-26 197.2 28.9 318 42-416 8-375 (376)
143 PRK03321 putative aminotransfe 99.9 7.1E-22 1.5E-26 198.1 26.7 313 32-416 23-349 (352)
144 cd00615 Orn_deC_like Ornithine 99.9 2.9E-23 6.4E-28 202.7 16.3 222 82-330 64-293 (294)
145 PRK14809 histidinol-phosphate 99.9 2.3E-21 5E-26 194.7 30.3 315 31-417 30-356 (357)
146 PLN02724 Molybdenum cofactor s 99.9 1.3E-21 2.9E-26 214.4 30.9 366 33-419 35-489 (805)
147 TIGR01788 Glu-decarb-GAD gluta 99.9 5.8E-21 1.3E-25 194.2 33.3 338 41-417 51-428 (431)
148 PRK07865 N-succinyldiaminopime 99.9 4.7E-21 1E-25 193.0 31.8 339 8-412 3-362 (364)
149 PRK02610 histidinol-phosphate 99.9 3.3E-21 7.1E-26 194.8 30.6 322 32-417 29-370 (374)
150 PRK09105 putative aminotransfe 99.9 4E-21 8.8E-26 193.6 30.7 311 32-416 44-368 (370)
151 PLN02672 methionine S-methyltr 99.9 4.1E-21 8.9E-26 210.0 32.9 333 31-416 697-1078(1082)
152 PRK08056 threonine-phosphate d 99.9 5.3E-21 1.1E-25 192.0 30.5 319 31-417 20-354 (356)
153 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.3E-21 2.8E-26 196.7 26.0 315 45-413 5-363 (363)
154 PF00155 Aminotran_1_2: Aminot 99.9 7.1E-22 1.5E-26 198.8 24.0 270 100-412 70-363 (363)
155 TIGR02618 tyr_phenol_ly tyrosi 99.9 2.4E-21 5.3E-26 193.5 27.2 314 67-422 65-430 (450)
156 PRK10534 L-threonine aldolase; 99.9 2.3E-21 5.1E-26 192.8 27.0 319 34-416 2-331 (333)
157 PRK03080 phosphoserine aminotr 99.9 1.1E-21 2.4E-26 198.2 24.6 342 33-419 13-374 (378)
158 PRK06836 aspartate aminotransf 99.9 2.3E-20 5E-25 189.9 34.2 336 32-418 34-391 (394)
159 PRK05937 8-amino-7-oxononanoat 99.9 1E-20 2.3E-25 190.8 30.9 321 36-419 8-351 (370)
160 cd00609 AAT_like Aspartate ami 99.9 7.7E-21 1.7E-25 189.6 29.6 300 73-413 36-349 (350)
161 PLN02607 1-aminocyclopropane-1 99.9 1.3E-20 2.9E-25 193.6 32.0 345 33-419 49-438 (447)
162 PRK09275 aspartate aminotransf 99.9 2.7E-21 5.8E-26 199.8 26.9 349 32-420 101-519 (527)
163 TIGR03542 DAPAT_plant LL-diami 99.9 1.7E-20 3.7E-25 191.4 32.6 342 31-415 33-401 (402)
164 TIGR01366 serC_3 phosphoserine 99.9 2.7E-21 5.9E-26 193.8 26.2 340 34-417 5-359 (361)
165 KOG1360 5-aminolevulinate synt 99.9 4.4E-21 9.5E-26 182.3 25.8 335 32-418 171-524 (570)
166 PRK07392 threonine-phosphate d 99.9 1.4E-20 2.9E-25 189.4 30.9 318 31-417 22-358 (360)
167 cd06450 DOPA_deC_like DOPA dec 99.9 9.9E-22 2.1E-26 196.4 22.5 281 73-414 34-344 (345)
168 TIGR03801 asp_4_decarbox aspar 99.9 5.6E-21 1.2E-25 197.2 28.0 348 32-419 95-517 (521)
169 KOG1359 Glycine C-acetyltransf 99.9 1.6E-21 3.4E-26 178.6 20.6 327 34-418 69-412 (417)
170 PRK04781 histidinol-phosphate 99.9 8.6E-21 1.9E-25 190.9 28.0 283 83-415 65-360 (364)
171 TIGR03539 DapC_actino succinyl 99.9 2.4E-20 5.1E-25 187.4 30.9 316 30-411 20-355 (357)
172 KOG0259 Tyrosine aminotransfer 99.9 2.7E-20 5.8E-25 176.6 28.8 346 32-415 62-434 (447)
173 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 8.5E-22 1.8E-26 196.2 19.1 265 82-374 71-400 (417)
174 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 1.6E-20 3.4E-25 189.7 28.4 320 43-416 9-374 (375)
175 PRK05839 hypothetical protein; 99.9 5E-20 1.1E-24 186.1 32.0 325 32-417 25-373 (374)
176 PRK04635 histidinol-phosphate 99.9 7E-21 1.5E-25 190.9 25.2 275 84-414 67-351 (354)
177 PRK01688 histidinol-phosphate 99.9 4.4E-21 9.5E-26 192.1 23.4 277 83-412 63-350 (351)
178 PRK07908 hypothetical protein; 99.9 6.3E-20 1.4E-24 183.7 31.6 318 28-417 19-346 (349)
179 TIGR01364 serC_1 phosphoserine 99.9 9.7E-21 2.1E-25 188.6 25.4 334 43-417 3-347 (349)
180 PRK09440 avtA valine--pyruvate 99.9 7E-20 1.5E-24 187.8 32.2 305 77-418 78-411 (416)
181 PRK00451 glycine dehydrogenase 99.9 6.6E-20 1.4E-24 189.7 32.3 303 82-416 117-446 (447)
182 PRK06358 threonine-phosphate d 99.9 5.5E-20 1.2E-24 184.4 30.1 316 33-416 21-353 (354)
183 cd00611 PSAT_like Phosphoserin 99.9 1.2E-20 2.7E-25 189.0 25.3 336 34-415 1-353 (355)
184 PLN02414 glycine dehydrogenase 99.9 7.9E-20 1.7E-24 199.6 31.8 308 81-422 572-911 (993)
185 PRK15407 lipopolysaccharide bi 99.9 1.2E-19 2.7E-24 185.8 30.8 299 74-417 64-435 (438)
186 PLN03032 serine decarboxylase; 99.9 1.4E-19 3E-24 180.5 29.9 272 43-340 35-322 (374)
187 PRK15029 arginine decarboxylas 99.9 4.3E-20 9.4E-25 196.5 25.9 298 81-417 209-603 (755)
188 PRK09257 aromatic amino acid a 99.9 7.8E-20 1.7E-24 186.2 26.8 348 13-415 6-395 (396)
189 COG2008 GLY1 Threonine aldolas 99.9 1E-19 2.2E-24 173.7 24.4 318 38-415 5-340 (342)
190 TIGR01328 met_gam_lyase methio 99.9 1.1E-19 2.4E-24 184.0 26.2 225 62-335 50-281 (391)
191 PRK08861 cystathionine gamma-s 99.9 2.3E-19 4.9E-24 180.7 28.2 213 71-332 51-270 (388)
192 PRK06767 methionine gamma-lyas 99.9 7.2E-20 1.6E-24 185.3 24.3 289 71-417 59-384 (386)
193 PRK03967 histidinol-phosphate 99.9 3.4E-19 7.4E-24 177.5 28.1 307 32-418 19-334 (337)
194 PRK05968 hypothetical protein; 99.9 1.1E-19 2.5E-24 183.8 24.4 288 72-417 62-385 (389)
195 PRK07811 cystathionine gamma-s 99.9 1.9E-19 4.1E-24 182.2 25.4 214 73-335 61-282 (388)
196 PRK06425 histidinol-phosphate 99.9 2.8E-19 6.1E-24 177.7 25.9 271 84-416 47-331 (332)
197 PLN02242 methionine gamma-lyas 99.8 2.1E-19 4.6E-24 182.9 25.1 223 71-339 74-304 (418)
198 PRK14808 histidinol-phosphate 99.8 7.6E-19 1.6E-23 174.7 28.3 304 30-414 18-333 (335)
199 PTZ00376 aspartate aminotransf 99.8 3E-19 6.5E-24 182.3 25.5 267 103-417 103-402 (404)
200 PRK08574 cystathionine gamma-s 99.8 3.6E-19 7.9E-24 179.7 25.0 213 71-332 51-269 (385)
201 PLN02397 aspartate transaminas 99.8 2.5E-19 5.3E-24 183.7 23.8 264 104-418 125-421 (423)
202 PRK07504 O-succinylhomoserine 99.8 2.5E-19 5.4E-24 181.8 23.4 221 62-332 56-282 (398)
203 PRK08133 O-succinylhomoserine 99.8 3.9E-19 8.4E-24 180.0 24.3 245 38-335 30-281 (390)
204 PRK06234 methionine gamma-lyas 99.8 5.7E-19 1.2E-23 179.4 25.6 289 73-417 64-396 (400)
205 PRK08045 cystathionine gamma-s 99.8 6.8E-19 1.5E-23 177.7 25.2 211 72-332 51-269 (386)
206 PRK08776 cystathionine gamma-s 99.8 8.9E-19 1.9E-23 177.8 25.9 211 73-332 60-277 (405)
207 PRK05367 glycine dehydrogenase 99.8 2.1E-18 4.4E-23 189.4 30.5 309 77-422 542-879 (954)
208 cd00614 CGS_like CGS_like: Cys 99.8 5.5E-19 1.2E-23 178.0 23.7 249 71-370 38-309 (369)
209 PLN02880 tyrosine decarboxylas 99.8 2.8E-18 6.1E-23 177.7 29.3 312 74-418 119-484 (490)
210 TIGR01324 cysta_beta_ly_B cyst 99.8 6.5E-19 1.4E-23 177.1 23.8 289 71-417 48-375 (377)
211 PLN02452 phosphoserine transam 99.8 2.2E-18 4.8E-23 171.8 26.9 341 32-416 7-361 (365)
212 TIGR00461 gcvP glycine dehydro 99.8 7.1E-18 1.5E-22 182.2 32.6 313 77-422 530-871 (939)
213 PRK07503 methionine gamma-lyas 99.8 2E-18 4.2E-23 175.5 26.9 213 73-332 65-283 (403)
214 PRK04311 selenocysteine syntha 99.8 4.7E-18 1E-22 174.0 29.7 319 40-416 95-462 (464)
215 TIGR01329 cysta_beta_ly_E cyst 99.8 1.3E-18 2.7E-23 175.6 24.7 289 71-418 45-375 (378)
216 TIGR01140 L_thr_O3P_dcar L-thr 99.8 3E-18 6.5E-23 170.2 27.0 288 31-392 17-316 (330)
217 PRK12566 glycine dehydrogenase 99.8 2.9E-18 6.2E-23 184.0 28.5 310 75-422 542-880 (954)
218 PRK07050 cystathionine beta-ly 99.8 1.6E-18 3.4E-23 175.6 24.8 290 71-418 63-391 (394)
219 TIGR03799 NOD_PanD_pyr putativ 99.8 1.1E-17 2.4E-22 173.7 30.6 315 73-410 125-517 (522)
220 PRK07269 cystathionine gamma-s 99.8 2.1E-18 4.6E-23 172.7 24.3 228 71-350 52-287 (364)
221 PRK13578 ornithine decarboxyla 99.8 1.3E-18 2.9E-23 183.4 23.1 301 81-417 178-564 (720)
222 PRK08064 cystathionine beta-ly 99.8 4.1E-18 8.8E-23 172.6 25.8 250 72-374 53-328 (390)
223 TIGR00474 selA seryl-tRNA(sec) 99.8 1.2E-17 2.7E-22 170.5 29.4 314 41-412 91-453 (454)
224 PRK08637 hypothetical protein; 99.8 1.1E-17 2.4E-22 169.9 28.9 276 101-417 72-385 (388)
225 TIGR01325 O_suc_HS_sulf O-succ 99.8 3E-18 6.4E-23 173.2 24.6 221 62-333 45-271 (380)
226 PRK08114 cystathionine beta-ly 99.8 7.3E-18 1.6E-22 169.2 27.1 289 71-417 60-392 (395)
227 TIGR03531 selenium_SpcS O-phos 99.8 1.2E-17 2.7E-22 169.2 28.4 309 75-415 103-443 (444)
228 PRK07810 O-succinylhomoserine 99.8 3.3E-18 7.2E-23 173.6 24.3 214 71-332 68-287 (403)
229 TIGR01365 serC_2 phosphoserine 99.8 8.8E-18 1.9E-22 167.6 26.0 339 36-417 7-372 (374)
230 PRK05664 threonine-phosphate d 99.8 1.1E-17 2.4E-22 166.2 26.3 262 84-417 56-327 (330)
231 TIGR02080 O_succ_thio_ly O-suc 99.8 6.9E-18 1.5E-22 170.2 25.1 212 71-332 49-268 (382)
232 PRK15400 lysine decarboxylase 99.8 2.5E-18 5.5E-23 181.2 22.6 293 81-417 199-558 (714)
233 PRK08247 cystathionine gamma-s 99.8 7.2E-18 1.6E-22 169.6 24.5 229 71-350 50-287 (366)
234 PRK08249 cystathionine gamma-s 99.8 1.6E-17 3.4E-22 168.4 26.6 213 71-332 62-280 (398)
235 PLN02590 probable tyrosine dec 99.8 4.8E-17 1E-21 168.7 30.5 318 73-417 166-531 (539)
236 PRK05613 O-acetylhomoserine am 99.8 8.2E-18 1.8E-22 171.7 24.3 193 35-258 35-233 (437)
237 PRK09028 cystathionine beta-ly 99.8 1.3E-17 2.8E-22 167.9 25.1 210 73-332 61-277 (394)
238 PRK08354 putative aminotransfe 99.8 7.2E-17 1.6E-21 159.0 29.9 292 32-415 9-309 (311)
239 PRK15399 lysine decarboxylase 99.8 2.2E-17 4.7E-22 174.1 26.3 292 81-417 199-558 (713)
240 PRK06434 cystathionine gamma-l 99.8 1.4E-17 3E-22 167.2 23.7 244 71-369 62-322 (384)
241 PRK06959 putative threonine-ph 99.8 3.4E-17 7.5E-22 163.1 26.3 264 83-419 59-334 (339)
242 PRK05939 hypothetical protein; 99.8 3.4E-17 7.3E-22 165.8 26.5 150 71-249 45-197 (397)
243 COG0076 GadB Glutamate decarbo 99.8 3.4E-17 7.4E-22 167.1 26.4 300 39-374 70-403 (460)
244 PRK06460 hypothetical protein; 99.8 5.9E-17 1.3E-21 163.3 27.6 211 73-332 45-261 (376)
245 TIGR00707 argD acetylornithine 99.8 7.3E-17 1.6E-21 163.4 28.5 324 32-416 28-379 (379)
246 PRK06176 cystathionine gamma-s 99.8 2.5E-17 5.5E-22 166.0 24.7 219 62-332 41-266 (380)
247 KOG1368 Threonine aldolase [Am 99.8 3.1E-17 6.6E-22 151.1 22.6 317 33-414 23-364 (384)
248 PRK00854 rocD ornithine--oxo-a 99.8 1.3E-16 2.8E-21 162.8 29.6 310 44-417 59-400 (401)
249 PRK07505 hypothetical protein; 99.8 3.2E-16 7E-21 159.9 32.3 333 32-418 47-399 (402)
250 PLN02368 alanine transaminase 99.8 3.4E-17 7.3E-22 166.4 24.9 244 76-351 110-396 (407)
251 PRK07671 cystathionine beta-ly 99.8 3.5E-17 7.7E-22 164.9 24.8 213 71-332 48-266 (377)
252 cd00610 OAT_like Acetyl ornith 99.8 7E-17 1.5E-21 165.4 27.4 331 32-416 37-413 (413)
253 PRK07049 methionine gamma-lyas 99.8 3.4E-17 7.3E-22 167.4 24.9 216 73-335 83-315 (427)
254 PRK06702 O-acetylhomoserine am 99.8 7.8E-17 1.7E-21 163.6 27.2 159 71-256 59-223 (432)
255 PLN02509 cystathionine beta-ly 99.8 2.9E-17 6.4E-22 168.2 23.8 212 71-332 131-349 (464)
256 TIGR02617 tnaA_trp_ase tryptop 99.8 2.2E-16 4.8E-21 156.5 28.1 336 42-422 54-445 (467)
257 PRK08248 O-acetylhomoserine am 99.8 7.9E-17 1.7E-21 164.6 25.4 160 71-258 62-227 (431)
258 PRK08134 O-acetylhomoserine am 99.8 6.5E-17 1.4E-21 165.2 24.7 158 71-256 62-225 (433)
259 PRK07812 O-acetylhomoserine am 99.8 6.8E-17 1.5E-21 164.9 24.3 153 71-250 67-222 (436)
260 PRK03244 argD acetylornithine 99.8 3.6E-16 7.8E-21 159.4 29.7 318 44-418 61-394 (398)
261 PRK07582 cystathionine gamma-l 99.8 1.2E-16 2.7E-21 160.5 25.7 244 72-372 50-317 (366)
262 PRK06084 O-acetylhomoserine am 99.8 8.9E-17 1.9E-21 164.1 25.0 159 72-258 57-221 (425)
263 PRK01278 argD acetylornithine 99.8 5.5E-16 1.2E-20 157.6 30.7 313 43-417 48-387 (389)
264 PRK05994 O-acetylhomoserine am 99.8 1.5E-16 3.3E-21 162.7 26.5 156 73-256 63-224 (427)
265 PLN02263 serine decarboxylase 99.8 1.7E-16 3.7E-21 160.7 25.9 295 74-416 130-441 (470)
266 PRK05967 cystathionine beta-ly 99.8 2.4E-16 5.2E-21 158.4 26.0 213 71-332 62-280 (395)
267 PRK04073 rocD ornithine--oxo-a 99.8 6.2E-16 1.4E-20 157.5 29.3 312 43-416 57-395 (396)
268 COG1982 LdcC Arginine/lysine/o 99.8 1.1E-16 2.5E-21 162.4 23.4 295 82-415 75-405 (557)
269 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2.4E-16 5.2E-21 161.1 25.1 159 72-258 56-219 (418)
270 PTZ00125 ornithine aminotransf 99.8 1.5E-15 3.2E-20 155.0 30.8 318 43-418 48-395 (400)
271 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 8.3E-17 1.8E-21 161.2 20.9 289 71-417 53-386 (386)
272 COG0626 MetC Cystathionine bet 99.7 7.1E-16 1.5E-20 152.8 25.1 214 71-332 61-282 (396)
273 COG1103 Archaea-specific pyrid 99.7 1.3E-15 2.9E-20 138.5 24.7 323 32-418 16-380 (382)
274 PRK12462 phosphoserine aminotr 99.7 1.2E-15 2.6E-20 150.7 26.2 341 30-415 2-359 (364)
275 TIGR01885 Orn_aminotrans ornit 99.7 4.2E-15 9.2E-20 151.7 30.6 310 43-416 54-400 (401)
276 PRK02936 argD acetylornithine 99.7 7.9E-15 1.7E-19 148.5 31.4 313 43-416 46-377 (377)
277 KOG1357 Serine palmitoyltransf 99.7 3.6E-16 7.9E-21 151.6 19.6 315 44-415 157-499 (519)
278 COG1003 GcvP Glycine cleavage 99.7 5.3E-15 1.1E-19 143.3 26.3 307 83-420 115-449 (496)
279 cd01494 AAT_I Aspartate aminot 99.7 2.2E-16 4.7E-21 140.5 15.7 163 82-257 5-170 (170)
280 KOG0256 1-aminocyclopropane-1- 99.7 3.5E-15 7.6E-20 143.3 24.3 265 100-395 149-443 (471)
281 PRK02627 acetylornithine amino 99.7 2E-14 4.4E-19 146.4 30.4 312 44-417 57-393 (396)
282 PF00282 Pyridoxal_deC: Pyrido 99.7 6.4E-15 1.4E-19 147.8 25.1 251 72-349 74-371 (373)
283 PLN02414 glycine dehydrogenase 99.7 1.7E-14 3.6E-19 158.2 27.9 288 82-414 153-465 (993)
284 KOG0634 Aromatic amino acid am 99.7 5.5E-14 1.2E-18 136.2 28.0 288 94-418 122-466 (472)
285 PRK05093 argD bifunctional N-s 99.7 4.3E-14 9.3E-19 144.3 29.0 311 43-417 57-399 (403)
286 TIGR03246 arg_catab_astC succi 99.7 5.2E-14 1.1E-18 143.3 29.4 316 43-418 52-395 (397)
287 PF01212 Beta_elim_lyase: Beta 99.7 1.1E-16 2.3E-21 154.7 8.3 252 39-337 4-275 (290)
288 PRK12381 bifunctional succinyl 99.7 5.8E-14 1.3E-18 143.4 27.6 316 44-418 57-399 (406)
289 COG1448 TyrB Aspartate/tyrosin 99.7 1.3E-14 2.8E-19 139.2 20.8 323 32-415 27-395 (396)
290 PRK04260 acetylornithine amino 99.7 2.3E-13 5E-18 137.6 31.1 307 44-415 46-374 (375)
291 COG3977 Alanine-alpha-ketoisov 99.6 1.6E-13 3.5E-18 126.8 25.4 342 31-416 30-413 (417)
292 COG3844 Kynureninase [Amino ac 99.6 3.3E-13 7.3E-18 126.3 25.9 336 43-418 43-402 (407)
293 TIGR00713 hemL glutamate-1-sem 99.6 3.6E-13 7.8E-18 138.4 28.7 324 32-417 49-421 (423)
294 PLN02624 ornithine-delta-amino 99.6 1.7E-12 3.7E-17 134.7 32.1 317 44-419 93-445 (474)
295 COG2873 MET17 O-acetylhomoseri 99.6 6.3E-14 1.4E-18 133.5 19.3 165 62-256 53-223 (426)
296 PF06838 Met_gamma_lyase: Meth 99.6 5.7E-13 1.2E-17 127.4 25.5 272 45-365 27-328 (403)
297 KOG0633 Histidinol phosphate a 99.6 2.7E-13 5.9E-18 122.9 19.2 273 100-414 88-373 (375)
298 PLN00144 acetylornithine trans 99.6 3.6E-12 7.9E-17 128.9 29.6 315 43-418 32-380 (382)
299 PRK05367 glycine dehydrogenase 99.6 4.7E-13 1E-17 147.5 24.6 286 82-413 126-437 (954)
300 COG4992 ArgD Ornithine/acetylo 99.5 9.1E-12 2E-16 121.8 28.9 330 31-419 42-399 (404)
301 PRK08088 4-aminobutyrate amino 99.5 7.2E-12 1.6E-16 128.7 29.7 328 44-418 59-423 (425)
302 PRK03715 argD acetylornithine 99.5 7.2E-12 1.6E-16 127.2 29.2 312 44-418 54-393 (395)
303 KOG0053 Cystathionine beta-lya 99.5 2.3E-13 5E-18 133.3 16.7 212 71-332 75-294 (409)
304 TIGR03811 tyr_de_CO2_Ent tyros 99.5 5.2E-12 1.1E-16 132.7 27.1 254 74-356 120-507 (608)
305 PRK09792 4-aminobutyrate trans 99.5 9.4E-12 2E-16 127.5 28.5 329 43-417 57-420 (421)
306 PRK08360 4-aminobutyrate amino 99.5 2.6E-11 5.6E-16 124.8 31.1 329 43-419 58-427 (443)
307 KOG1358 Serine palmitoyltransf 99.5 2.4E-12 5.2E-17 123.2 20.3 330 38-417 100-464 (467)
308 PRK08117 4-aminobutyrate amino 99.5 3.2E-11 6.9E-16 124.3 29.7 330 43-418 60-429 (433)
309 PRK04612 argD acetylornithine 99.5 6.1E-11 1.3E-15 120.8 31.0 320 43-418 57-403 (408)
310 PRK05964 adenosylmethionine--8 99.5 2.5E-11 5.4E-16 124.7 28.1 326 44-418 60-422 (423)
311 PRK00062 glutamate-1-semialdeh 99.5 2.9E-11 6.2E-16 124.3 27.8 328 32-418 51-424 (426)
312 PLN02760 4-aminobutyrate:pyruv 99.5 1.5E-10 3.2E-15 120.7 32.0 320 44-418 107-491 (504)
313 PRK11522 putrescine--2-oxoglut 99.4 2.5E-10 5.5E-15 117.8 31.7 322 44-419 100-452 (459)
314 TIGR03372 putres_am_tran putre 99.4 1.2E-10 2.5E-15 119.5 28.9 319 44-416 93-442 (442)
315 TIGR00700 GABAtrnsam 4-aminobu 99.4 1E-10 2.2E-15 120.0 28.1 329 43-417 50-419 (420)
316 KOG1383 Glutamate decarboxylas 99.4 1E-10 2.3E-15 114.8 26.0 273 75-375 118-414 (491)
317 PRK07495 4-aminobutyrate amino 99.4 7E-10 1.5E-14 113.7 33.0 329 43-418 57-421 (425)
318 PRK00615 glutamate-1-semialdeh 99.4 4.6E-10 1E-14 115.0 31.1 319 43-419 70-429 (433)
319 PRK06777 4-aminobutyrate amino 99.4 6.4E-10 1.4E-14 114.0 31.4 321 43-416 57-419 (421)
320 PRK09264 diaminobutyrate--2-ox 99.4 4.3E-10 9.2E-15 115.5 30.1 332 43-419 56-417 (425)
321 TIGR02407 ectoine_ectB diamino 99.4 4.9E-10 1.1E-14 114.5 30.2 329 43-417 52-411 (412)
322 PRK06541 hypothetical protein; 99.4 4.4E-10 9.5E-15 116.2 29.5 322 44-418 70-455 (460)
323 COG3033 TnaA Tryptophanase [Am 99.4 1.5E-10 3.3E-15 109.9 23.2 310 84-422 86-448 (471)
324 COG0160 GabT 4-aminobutyrate a 99.4 8.4E-10 1.8E-14 111.1 29.7 329 44-418 74-445 (447)
325 PRK06058 4-aminobutyrate amino 99.4 9.5E-10 2.1E-14 113.5 30.5 329 44-417 74-441 (443)
326 PRK13360 omega amino acid--pyr 99.4 1.6E-09 3.4E-14 111.6 31.8 320 43-418 63-440 (442)
327 COG1921 SelA Selenocysteine sy 99.4 4E-11 8.6E-16 117.3 18.6 229 39-310 35-273 (395)
328 COG0001 HemL Glutamate-1-semia 99.4 1.7E-09 3.8E-14 107.0 30.2 314 44-418 71-428 (432)
329 PRK08593 4-aminobutyrate amino 99.4 6.6E-10 1.4E-14 114.6 28.6 322 44-419 60-430 (445)
330 PRK09221 beta alanine--pyruvat 99.4 1.3E-09 2.7E-14 112.4 30.7 320 43-418 66-443 (445)
331 TIGR00508 bioA adenosylmethion 99.4 6.2E-10 1.3E-14 114.2 28.2 319 43-417 62-425 (427)
332 PRK12403 putative aminotransfe 99.4 1.1E-09 2.4E-14 113.3 30.3 321 43-419 71-453 (460)
333 PRK06918 4-aminobutyrate amino 99.4 1.5E-09 3.3E-14 112.3 31.4 324 44-419 72-444 (451)
334 TIGR00461 gcvP glycine dehydro 99.4 1.7E-10 3.6E-15 125.6 24.8 286 82-413 114-426 (939)
335 PRK06105 aminotransferase; Pro 99.3 2.2E-09 4.8E-14 111.1 30.1 322 43-419 65-450 (460)
336 PRK05769 4-aminobutyrate amino 99.3 2.2E-09 4.9E-14 110.5 29.4 327 44-418 72-439 (441)
337 PRK04013 argD acetylornithine/ 99.3 2.8E-09 6.2E-14 106.7 28.9 303 43-418 41-360 (364)
338 PRK07986 adenosylmethionine--8 99.3 2.4E-09 5.2E-14 109.6 28.4 320 43-418 60-423 (428)
339 PRK06062 hypothetical protein; 99.3 5.2E-09 1.1E-13 108.0 30.8 319 44-419 71-446 (451)
340 PRK06173 adenosylmethionine--8 99.3 3.9E-09 8.5E-14 108.2 28.9 320 43-418 61-425 (429)
341 PF12897 Aminotran_MocR: Alani 99.3 2.2E-09 4.9E-14 103.8 23.4 339 32-419 23-416 (425)
342 PLN02482 glutamate-1-semialdeh 99.3 1.6E-08 3.4E-13 104.7 31.5 313 44-417 117-472 (474)
343 PRK07046 aminotransferase; Val 99.3 1.3E-08 2.7E-13 105.1 30.6 317 44-418 93-450 (453)
344 PRK12389 glutamate-1-semialdeh 99.2 1.6E-08 3.5E-13 103.9 31.3 311 44-417 71-426 (428)
345 PF02347 GDC-P: Glycine cleava 99.2 4.7E-09 1E-13 105.3 26.3 286 82-412 115-429 (429)
346 COG4100 Cystathionine beta-lya 99.2 5.4E-10 1.2E-14 103.7 17.9 228 75-338 67-313 (416)
347 KOG2040 Glycine dehydrogenase 99.2 2.3E-09 4.9E-14 108.6 23.4 303 83-417 588-917 (1001)
348 PRK07678 aminotransferase; Val 99.2 3.6E-08 7.7E-13 101.9 31.8 321 44-418 65-449 (451)
349 PRK06082 4-aminobutyrate amino 99.2 2.2E-08 4.9E-13 103.5 30.1 319 44-418 89-451 (459)
350 TIGR00709 dat 2,4-diaminobutyr 99.2 6E-08 1.3E-12 100.1 32.7 322 43-418 56-435 (442)
351 PF03841 SelA: L-seryl-tRNA se 99.2 3.1E-11 6.7E-16 117.1 7.5 244 41-332 16-296 (367)
352 COG1932 SerC Phosphoserine ami 99.2 3.2E-09 6.9E-14 102.1 20.5 340 33-417 6-362 (365)
353 PRK05965 hypothetical protein; 99.2 2.6E-08 5.6E-13 103.1 28.2 328 44-418 64-447 (459)
354 PRK05639 4-aminobutyrate amino 99.2 4.6E-08 9.9E-13 101.1 29.5 329 44-419 71-444 (457)
355 PRK07480 putative aminotransfe 99.2 6.6E-08 1.4E-12 100.0 30.6 321 44-419 68-449 (456)
356 KOG0629 Glutamate decarboxylas 99.2 5.7E-10 1.2E-14 108.2 14.1 244 78-339 142-421 (510)
357 PRK05630 adenosylmethionine--8 99.2 4E-08 8.7E-13 100.6 28.3 315 44-418 58-420 (422)
358 PRK07482 hypothetical protein; 99.1 8.1E-08 1.8E-12 99.5 29.9 322 44-418 68-454 (461)
359 PRK07481 hypothetical protein; 99.1 7E-08 1.5E-12 99.7 29.3 328 43-418 59-445 (449)
360 PRK06148 hypothetical protein; 99.1 6.7E-08 1.5E-12 108.9 30.9 320 44-418 640-1010(1013)
361 PRK06149 hypothetical protein; 99.1 6.3E-08 1.4E-12 109.0 30.5 325 44-418 601-970 (972)
362 COG0403 GcvP Glycine cleavage 99.1 2.4E-08 5.3E-13 97.6 23.1 291 82-414 125-446 (450)
363 PRK06209 glutamate-1-semialdeh 99.1 7.4E-08 1.6E-12 99.1 28.0 307 44-419 66-406 (431)
364 PRK07036 hypothetical protein; 99.1 1.2E-07 2.5E-12 98.4 29.3 320 44-419 69-453 (466)
365 PRK06943 adenosylmethionine--8 99.1 3.8E-07 8.1E-12 94.3 32.8 320 43-418 71-446 (453)
366 KOG0258 Alanine aminotransfera 99.1 1.3E-07 2.9E-12 91.1 26.2 283 73-392 113-452 (475)
367 PRK06916 adenosylmethionine--8 99.1 1.7E-07 3.7E-12 97.1 28.8 320 43-418 73-455 (460)
368 PRK08742 adenosylmethionine--8 99.1 3.3E-07 7.1E-12 95.1 30.8 213 169-418 222-467 (472)
369 PRK07483 hypothetical protein; 99.1 3.2E-07 7E-12 94.6 30.3 329 43-419 47-438 (443)
370 PRK06917 hypothetical protein; 99.1 4.8E-07 1E-11 93.4 31.5 329 43-419 48-438 (447)
371 PRK06938 diaminobutyrate--2-ox 99.0 4.2E-07 9.2E-12 94.2 29.5 279 104-418 134-460 (464)
372 TIGR00699 GABAtrns_euk 4-amino 99.0 8.6E-08 1.9E-12 98.7 24.0 209 169-416 237-464 (464)
373 TIGR03251 LAT_fam L-lysine 6-t 99.0 3.1E-07 6.7E-12 94.5 27.6 209 170-414 205-430 (431)
374 PRK07030 adenosylmethionine--8 99.0 5.9E-07 1.3E-11 93.1 29.4 321 43-419 64-447 (466)
375 KOG1412 Aspartate aminotransfe 99.0 2.4E-08 5.3E-13 93.3 16.7 279 99-419 101-406 (410)
376 KOG1402 Ornithine aminotransfe 99.0 9.5E-07 2.1E-11 83.5 26.2 313 44-416 77-425 (427)
377 COG0161 BioA Adenosylmethionin 98.9 6.9E-07 1.5E-11 89.9 26.2 215 169-419 199-444 (449)
378 PRK06931 diaminobutyrate--2-ox 98.9 1.7E-06 3.6E-11 89.7 29.3 186 198-418 248-454 (459)
379 PF05889 SLA_LP_auto_ag: Solub 98.9 3.8E-08 8.1E-13 96.6 16.0 299 86-417 65-389 (389)
380 PRK08297 L-lysine aminotransfe 98.9 1.7E-06 3.6E-11 89.3 29.0 212 170-418 212-441 (443)
381 KOG1404 Alanine-glyoxylate ami 98.9 4.6E-07 1E-11 87.6 22.4 180 198-412 235-432 (442)
382 KOG1411 Aspartate aminotransfe 98.9 4.8E-08 1E-12 92.7 13.5 332 26-417 45-424 (427)
383 PRK12566 glycine dehydrogenase 98.8 2.2E-06 4.7E-11 93.5 26.8 284 82-413 129-439 (954)
384 PLN02974 adenosylmethionine-8- 98.8 5.3E-06 1.1E-10 90.8 27.8 185 198-416 608-816 (817)
385 KOG0628 Aromatic-L-amino-acid/ 98.7 1.9E-06 4.2E-11 85.0 20.9 319 71-418 107-471 (511)
386 KOG1401 Acetylornithine aminot 98.5 5.9E-05 1.3E-09 73.8 23.2 217 84-331 105-347 (433)
387 PF00202 Aminotran_3: Aminotra 98.3 8.3E-06 1.8E-10 81.3 14.2 194 44-258 34-261 (339)
388 KOG1403 Predicted alanine-glyo 98.1 0.0014 3E-08 61.7 21.4 338 32-419 51-438 (452)
389 KOG3846 L-kynurenine hydrolase 98.0 0.0009 2E-08 63.2 18.9 309 82-418 116-461 (465)
390 KOG2790 Phosphoserine aminotra 97.8 0.00098 2.1E-08 62.3 14.7 338 32-416 7-366 (370)
391 PF04864 Alliinase_C: Allinase 97.8 0.00014 3E-09 70.1 9.3 278 76-414 46-361 (363)
392 KOG2040 Glycine dehydrogenase 97.6 0.0017 3.6E-08 67.1 15.1 286 83-413 169-478 (1001)
393 KOG1405 4-aminobutyrate aminot 97.6 0.0028 6E-08 61.1 14.7 207 169-417 254-482 (484)
394 PLN02994 1-aminocyclopropane-1 96.7 0.0056 1.2E-07 53.4 7.2 56 76-133 95-153 (153)
395 KOG3843 Predicted serine hydro 96.7 0.039 8.5E-07 51.3 12.5 88 166-256 139-237 (432)
396 KOG0630 Predicted pyridoxal-de 80.7 20 0.00043 36.8 11.0 94 166-260 272-377 (838)
397 cd02072 Glm_B12_BD B12 binding 66.4 16 0.00035 30.7 5.6 55 151-210 25-79 (128)
398 PRK02261 methylaspartate mutas 63.6 27 0.00058 29.7 6.5 53 151-208 29-81 (137)
399 COG1504 Uncharacterized conser 62.4 22 0.00047 28.8 5.2 49 166-215 47-95 (121)
400 PRK09375 quinolinate synthetas 61.0 61 0.0013 31.9 9.2 110 16-189 18-127 (319)
401 TIGR01501 MthylAspMutase methy 60.9 22 0.00048 30.1 5.5 55 151-210 27-81 (134)
402 cd02067 B12-binding B12 bindin 60.3 31 0.00067 28.2 6.3 53 152-209 26-78 (119)
403 COG2877 KdsA 3-deoxy-D-manno-o 56.7 23 0.00049 32.9 5.0 42 179-220 157-201 (279)
404 PF04131 NanE: Putative N-acet 56.2 47 0.001 29.9 6.9 73 167-245 51-123 (192)
405 PLN02672 methionine S-methyltr 55.1 1.4E+02 0.0031 34.6 12.1 87 171-258 517-616 (1082)
406 KOG4759 Ribosome recycling fac 55.1 1.8E+02 0.004 27.5 10.7 87 356-457 154-245 (263)
407 PRK12595 bifunctional 3-deoxy- 54.0 38 0.00082 34.0 6.7 58 164-221 231-299 (360)
408 PF02310 B12-binding: B12 bind 54.0 42 0.00091 27.3 6.1 53 167-219 37-91 (121)
409 TIGR01361 DAHP_synth_Bsub phos 53.0 26 0.00057 33.4 5.2 57 165-221 139-206 (260)
410 TIGR00496 frr ribosome recycli 52.9 1.7E+02 0.0037 26.1 11.3 88 357-457 66-158 (176)
411 PRK00945 acetyl-CoA decarbonyl 52.2 85 0.0018 27.9 7.8 65 166-230 20-84 (171)
412 COG1105 FruK Fructose-1-phosph 51.4 40 0.00086 33.0 6.1 58 162-219 105-169 (310)
413 TIGR02370 pyl_corrinoid methyl 50.9 47 0.001 30.1 6.3 62 150-216 109-174 (197)
414 PF14639 YqgF: Holliday-juncti 50.3 19 0.00042 31.1 3.5 44 166-209 48-91 (150)
415 COG2870 RfaE ADP-heptose synth 50.2 56 0.0012 33.0 7.0 69 148-216 108-178 (467)
416 PRK13397 3-deoxy-7-phosphohept 50.1 52 0.0011 31.1 6.5 58 164-221 128-196 (250)
417 cd02070 corrinoid_protein_B12- 49.1 50 0.0011 30.0 6.3 61 151-216 108-172 (201)
418 COG3010 NanE Putative N-acetyl 48.9 48 0.001 30.2 5.8 70 168-245 86-158 (229)
419 TIGR01362 KDO8P_synth 3-deoxy- 48.6 38 0.00083 32.0 5.3 55 166-221 125-187 (258)
420 cd05126 Mth938 Mth938 domain. 47.0 64 0.0014 26.6 5.9 50 167-217 45-94 (117)
421 cd02071 MM_CoA_mut_B12_BD meth 45.6 68 0.0015 26.4 6.0 52 152-208 26-77 (122)
422 PRK13396 3-deoxy-7-phosphohept 45.1 48 0.001 33.1 5.8 55 168-222 219-284 (352)
423 cd02069 methionine_synthase_B1 45.1 61 0.0013 29.8 6.2 60 150-214 113-174 (213)
424 COG2876 AroA 3-deoxy-D-arabino 44.4 51 0.0011 31.2 5.4 45 177-221 176-226 (286)
425 PRK00083 frr ribosome recyclin 44.1 2.4E+02 0.0052 25.3 11.1 87 358-457 76-167 (185)
426 TIGR03586 PseI pseudaminic aci 43.8 51 0.0011 32.6 5.8 89 165-258 141-241 (327)
427 cd06919 Asp_decarbox Aspartate 43.2 22 0.00048 28.8 2.5 16 113-128 73-88 (111)
428 TIGR00640 acid_CoA_mut_C methy 41.6 74 0.0016 26.8 5.7 54 151-209 28-81 (132)
429 COG1091 RfbD dTDP-4-dehydrorha 41.3 82 0.0018 30.4 6.5 63 167-232 36-112 (281)
430 TIGR00223 panD L-aspartate-alp 40.8 27 0.00059 29.0 2.7 20 109-128 70-89 (126)
431 PRK05198 2-dehydro-3-deoxyphos 39.6 60 0.0013 30.8 5.2 54 166-220 133-194 (264)
432 PRK05449 aspartate alpha-decar 39.5 28 0.0006 29.0 2.6 18 111-128 72-89 (126)
433 KOG0081 GTPase Rab27, small G 39.1 56 0.0012 28.5 4.4 48 171-218 114-164 (219)
434 COG0296 GlgB 1,4-alpha-glucan 38.8 33 0.00071 36.9 3.7 36 184-219 202-237 (628)
435 PRK13602 putative ribosomal pr 38.5 72 0.0016 24.4 4.7 45 170-216 16-60 (82)
436 PLN03033 2-dehydro-3-deoxyphos 35.9 81 0.0018 30.3 5.5 53 166-219 139-199 (290)
437 cd00984 DnaB_C DnaB helicase C 35.1 1E+02 0.0022 28.6 6.2 49 166-214 104-168 (242)
438 COG0853 PanD Aspartate 1-decar 34.6 47 0.001 27.4 3.1 18 111-128 71-88 (126)
439 COG3414 SgaB Phosphotransferas 33.7 80 0.0017 24.9 4.3 52 199-257 20-74 (93)
440 PRK13601 putative L7Ae-like ri 33.0 1.1E+02 0.0023 23.6 4.8 44 171-216 14-57 (82)
441 TIGR02026 BchE magnesium-proto 32.6 1.1E+02 0.0023 32.3 6.4 54 165-219 47-102 (497)
442 PF01765 RRF: Ribosome recycli 31.7 2.5E+02 0.0055 24.6 7.7 87 357-456 57-148 (165)
443 TIGR00715 precor6x_red precorr 31.1 2.7E+02 0.0057 26.5 8.2 47 166-213 50-96 (256)
444 cd00520 RRF Ribosome recycling 30.8 3.9E+02 0.0084 23.8 11.2 87 358-457 72-163 (179)
445 PRK04570 cell division protein 30.4 4.6E+02 0.0099 24.5 10.2 26 439-464 214-239 (243)
446 COG2204 AtoC Response regulato 29.8 1.4E+02 0.003 31.1 6.4 109 344-455 50-162 (464)
447 PF02603 Hpr_kinase_N: HPr Ser 29.8 82 0.0018 26.3 4.1 39 173-216 74-112 (127)
448 COG2248 Predicted hydrolase (m 29.0 3.9E+02 0.0085 25.4 8.5 50 166-216 187-246 (304)
449 PRK06683 hypothetical protein; 28.9 1.3E+02 0.0027 23.1 4.6 44 171-216 17-60 (82)
450 COG0233 Frr Ribosome recycling 28.8 4.3E+02 0.0094 23.7 11.3 88 357-457 77-169 (187)
451 cd00532 MGS-like MGS-like doma 28.6 1.3E+02 0.0029 24.3 5.1 46 172-217 58-107 (112)
452 cd00248 Mth938-like Mth938-lik 28.5 1.9E+02 0.0041 23.4 5.9 51 166-217 37-87 (109)
453 PF05184 SapB_1: Saposin-like 28.2 1.5E+02 0.0032 18.5 4.3 19 440-458 21-39 (39)
454 smart00642 Aamy Alpha-amylase 28.1 58 0.0013 28.7 3.0 28 191-218 65-92 (166)
455 cd02065 B12-binding_like B12 b 27.8 1.8E+02 0.004 23.4 6.0 52 168-219 37-90 (125)
456 cd05560 Xcc1710_like Xcc1710_l 27.8 1.9E+02 0.0041 23.4 5.7 50 166-217 38-87 (109)
457 PRK12457 2-dehydro-3-deoxyphos 27.7 1.4E+02 0.0031 28.6 5.7 55 167-221 140-203 (281)
458 PF02142 MGS: MGS-like domain 26.4 54 0.0012 25.6 2.3 42 172-213 51-94 (95)
459 COG1184 GCD2 Translation initi 26.3 3.6E+02 0.0077 26.3 8.2 95 100-214 122-226 (301)
460 TIGR00789 flhB_rel flhB C-term 26.0 57 0.0012 25.1 2.2 33 181-218 17-49 (82)
461 KOG2792 Putative cytochrome C 26.0 1.1E+02 0.0024 29.0 4.4 20 193-212 207-226 (280)
462 PF01248 Ribosomal_L7Ae: Ribos 25.9 2E+02 0.0042 22.3 5.5 46 170-217 20-66 (95)
463 PF00128 Alpha-amylase: Alpha 25.6 61 0.0013 31.0 3.0 28 191-218 47-74 (316)
464 COG0108 RibB 3,4-dihydroxy-2-b 25.6 1.4E+02 0.0029 27.2 4.8 35 180-214 155-190 (203)
465 PRK01018 50S ribosomal protein 25.0 1.7E+02 0.0036 23.3 4.9 43 170-214 21-63 (99)
466 PRK14625 hypothetical protein; 24.7 2.2E+02 0.0047 23.2 5.5 44 402-464 61-106 (109)
467 PRK14622 hypothetical protein; 24.4 1.9E+02 0.0041 23.3 5.1 43 402-463 60-102 (103)
468 PF02571 CbiJ: Precorrin-6x re 24.4 3.9E+02 0.0085 25.2 8.1 47 166-213 50-97 (249)
469 COG4962 CpaF Flp pilus assembl 24.0 2E+02 0.0042 28.7 6.0 68 105-188 184-255 (355)
470 PTZ00106 60S ribosomal protein 23.5 1.7E+02 0.0036 23.8 4.7 44 170-215 30-73 (108)
471 COG1066 Sms Predicted ATP-depe 23.5 1.6E+02 0.0035 30.0 5.4 48 167-214 154-215 (456)
472 PF03652 UPF0081: Uncharacteri 23.5 2.5E+02 0.0054 23.7 5.9 55 165-219 35-98 (135)
473 COG0816 Predicted endonuclease 23.4 2.1E+02 0.0046 24.5 5.4 53 165-217 36-97 (141)
474 cd01715 ETF_alpha The electron 22.8 1.5E+02 0.0032 25.9 4.7 46 170-219 72-117 (168)
475 PRK07714 hypothetical protein; 22.7 2.1E+02 0.0045 22.7 5.1 43 170-214 23-65 (100)
476 PF01904 DUF72: Protein of unk 22.5 2.5E+02 0.0053 26.1 6.3 72 346-417 120-202 (230)
477 PRK05583 ribosomal protein L7A 22.5 2.2E+02 0.0047 22.9 5.1 44 170-215 22-65 (104)
478 PF02571 CbiJ: Precorrin-6x re 22.3 88 0.0019 29.6 3.2 27 193-219 50-76 (249)
479 PF13378 MR_MLE_C: Enolase C-t 21.8 1.5E+02 0.0032 23.7 4.1 51 167-217 4-54 (111)
480 PRK07283 hypothetical protein; 21.7 2.2E+02 0.0048 22.5 5.0 42 170-213 23-64 (98)
481 PRK00153 hypothetical protein; 21.5 2.1E+02 0.0045 22.9 4.8 42 402-462 62-103 (104)
482 cd03315 MLE_like Muconate lact 20.9 2.1E+02 0.0045 27.1 5.6 51 166-216 188-238 (265)
483 PF00403 HMA: Heavy-metal-asso 20.9 3E+02 0.0064 19.1 5.4 48 322-369 13-61 (62)
484 COG1377 FlhB Flagellar biosynt 20.9 1.2E+02 0.0025 30.5 3.8 18 200-217 300-317 (363)
485 PRK05234 mgsA methylglyoxal sy 20.7 2E+02 0.0044 24.5 4.9 49 171-219 65-116 (142)
486 COG1163 DRG Predicted GTPase [ 20.6 2.6E+02 0.0055 27.7 5.9 61 346-410 146-209 (365)
487 cd01422 MGS Methylglyoxal synt 20.5 2.6E+02 0.0057 22.8 5.4 46 171-216 60-108 (115)
488 PRK09441 cytoplasmic alpha-amy 20.3 86 0.0019 32.8 3.0 29 190-218 75-103 (479)
489 PRK04175 rpl7ae 50S ribosomal 20.3 2.3E+02 0.0049 23.6 4.9 45 170-216 35-80 (122)
490 TIGR00649 MG423 conserved hypo 20.3 3.7E+02 0.008 27.5 7.6 82 119-210 317-401 (422)
491 COG4566 TtrR Response regulato 20.0 4.1E+02 0.0089 24.1 6.6 28 345-372 51-78 (202)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-117 Score=823.93 Aligned_cols=458 Identities=71% Similarity=1.105 Sum_probs=442.9
Q ss_pred ccccccccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHH
Q 012104 4 VNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (471)
Q Consensus 4 ~~~~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~ 83 (471)
+..|.+..|.+.|||++++|++|..||+.+|+|||||||+|.+|+||++|+++|+|+|||||.|||+|++++|++|.+|+
T Consensus 13 ~~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq 92 (477)
T KOG2467|consen 13 VIKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQ 92 (477)
T ss_pred hhhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHH
Confidence 56778888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~ 163 (471)
+|+.++|+++++.|||||||.||+.||++++.++++|+|+||.+++++|||+||||++.. ++++..+.+|+..||.||+
T Consensus 93 ~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~-kkISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 93 KRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPT-KKISATSIYFESMPYKVDP 171 (477)
T ss_pred HHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCC-ceeeeeeeecccCceeeCC
Confidence 999999999999999999999999999999999999999999999999999999999887 8889999999999999999
Q ss_pred CCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCC
Q 012104 164 STGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH 243 (471)
Q Consensus 164 ~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~ 243 (471)
.||.||||.||+.+..++||+||++.|.|++.+|++++++||++.|+++++|+||++||+++|+.|+||++|||||+|||
T Consensus 172 ~TG~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTH 251 (477)
T KOG2467|consen 172 STGYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTH 251 (477)
T ss_pred CCCceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCCeEEEEeeCCCCCCCC-CCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 012104 244 KSLRGPRAGMIFYRKGPKPPKK-GQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA 322 (471)
Q Consensus 244 K~l~GprgG~i~~~~~~~~~~~-~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na 322 (471)
|+|+|||||+|++++.+++..+ .|+++. |++.++|+.++||+.|||||+|.|+++|+||+++.+++|++|++|+++|+
T Consensus 252 KsLRGPRg~mIFyRkGvk~~~~k~g~~i~-ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Na 330 (477)
T KOG2467|consen 252 KSLRGPRGAMIFYRKGVKSIKPKQGKEIL-YDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNA 330 (477)
T ss_pred ccccCCcceeEEEeccCCcCCCCCCCcce-echhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999999999999988774 477766 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 323 VALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 323 ~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
+.|++.|.++|++++++|||+|++++|+++.|+++..+++.|+.++|.+|+|++|||.+++.++|||||+|++|+||+.|
T Consensus 331 kala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e 410 (477)
T KOG2467|consen 331 KALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGE 410 (477)
T ss_pred HHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-hhhhhhhccCCChH----HHHHHHHHHHHHHhcCCCCCCC
Q 012104 403 KDFEQIGEFLHRAVTLTLEIQKEYG-KLLKDFNKGLVNNK----DIEALKADVEKFASSFDMPGFK 463 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~~p~~~~~ 463 (471)
+|+++++++|.++++...++|...+ ++++||++.+.++. ++.+||++|++|+.+||+|+|+
T Consensus 411 ~df~~v~~fi~~av~i~~~~~~~~~~~~lkdf~~~~~~~~~~~~~v~~Lr~~Ve~fa~~fp~pg~~ 476 (477)
T KOG2467|consen 411 EDFEKVADFIDRAVKIALEIQKEAGGKKLKDFKKFLSENKVMSEEVAELRKRVEEFAGQFPMPGFE 476 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHhccCchhHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999998876 99999998876643 7899999999999999999985
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-109 Score=786.88 Aligned_cols=408 Identities=51% Similarity=0.785 Sum_probs=395.1
Q ss_pred ccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 012104 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (471)
Q Consensus 10 ~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~l 89 (471)
..|...||+++++|++|..||+++|+||||||++|++|++|++|.|+|||+|||||.|||+||+++|++|.+|++|+++|
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCC
Q 012104 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (471)
Q Consensus 90 fg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD 169 (471)
||+++ +||||+||++||.+++.+|++|||+||.+++.+|||+|||+ +++++|..|++++|++|++++.||
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~------~v~~sG~~~~~v~Y~vd~et~~ID 154 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS------PVNFSGKLFNVVSYGVDPETGLID 154 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC------CCCccceeEEeEecccccccCccC
Confidence 99998 79999999999999999999999999999999999999994 678999999999999999999999
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCC
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGP 249 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gp 249 (471)
||++++++.++|||+|++|.|.|++.+|++++++||+++|++|++|+||.+||+++|.+|+|+++|||||+||||||+||
T Consensus 155 yD~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGP 234 (413)
T COG0112 155 YDEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGP 234 (413)
T ss_pred HHHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
|||+|+++++ ++.+++++++||+.||+|++|.|||+++|++|+++++|++|++|+++|++.|++.|
T Consensus 235 rGG~Il~~~e--------------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l 300 (413)
T COG0112 235 RGGIILTNDE--------------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEAL 300 (413)
T ss_pred CceEEEeccH--------------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 9999999985 89999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC-CCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 330 TGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 330 ~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
.+.|+++++++|++|++++|+++.++++..++..|++.||.+|+|.+|+|+ +|+.+||||||++++|+||+.++||++|
T Consensus 301 ~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~I 380 (413)
T COG0112 301 KERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEI 380 (413)
T ss_pred HHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHH
Confidence 999999999999999999999988899999999999999999999999997 7899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCC
Q 012104 409 GEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 461 (471)
Q Consensus 409 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 461 (471)
+++|.+++.... ...+++|++|.+||++||+|.
T Consensus 381 a~~I~~vl~~~~--------------------~~~~~vk~~V~~l~~~fp~y~ 413 (413)
T COG0112 381 ADLIADVLDGLK--------------------DVPAEVKEEVAELCRRFPLYK 413 (413)
T ss_pred HHHHHHHHhccc--------------------hhHHHHHHHHHHHHHhCCCCC
Confidence 999999998642 447899999999999999974
No 3
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=1.6e-100 Score=770.16 Aligned_cols=458 Identities=69% Similarity=1.172 Sum_probs=428.4
Q ss_pred ccccccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 012104 6 EWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSR 85 (471)
Q Consensus 6 ~~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~ 85 (471)
.|.+..|.+.|||++++|.+|.+||+++|+||||||++||+|+++++|+++|+|+|||||.|||+||+++|++|.+|++|
T Consensus 123 ~~~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~er 202 (586)
T PLN02271 123 AWGNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCER 202 (586)
T ss_pred HHHhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHH
Confidence 34556788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCC
Q 012104 86 ALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSST 165 (471)
Q Consensus 86 ~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~ 165 (471)
++++||+++++|++||||+||+.||.+++.+|++|||+||+++++||||++|+++...|++++..|..+++++|++|+++
T Consensus 203 a~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~ 282 (586)
T PLN02271 203 ALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQT 282 (586)
T ss_pred HHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccccc
Confidence 99999999999999999999999999999999999999999999999999999765444567788999999999999889
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCc
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKS 245 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~ 245 (471)
+.||++++++++..++||||+++++.|++.+|+++|++||+++|+++++|++|.+|+++.+.+|+|+++|||+++|+|||
T Consensus 283 g~IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKt 362 (586)
T PLN02271 283 GYIDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKS 362 (586)
T ss_pred CccCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCccc
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEeeCCCCCCCCCCCCCc-----ccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 012104 246 LRGPRAGMIFYRKGPKPPKKGQPEGA-----VYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (471)
Q Consensus 246 l~GprgG~i~~~~~~~~~~~~~~~i~-----~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~ 320 (471)
|+|||||+|+++++.++...++...+ .+++.+++++++||++||+|++|.+||+|+|++++..++|++|++|+++
T Consensus 363 LrGPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~ 442 (586)
T PLN02271 363 LRGPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKK 442 (586)
T ss_pred CCCCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHH
Confidence 99999999999876554433322111 1468899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 321 NAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 321 na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
|++.|++.|.+.||++++++|++|++++|+++.|+++..+++.|+++||.+|++.+|+|.++..+++||||++++|+||+
T Consensus 443 NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~ 522 (586)
T PLN02271 443 NAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGC 522 (586)
T ss_pred HHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCCCC
Q 012104 401 LEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGFK 463 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 463 (471)
.++||++++++|.++++....+|.+.|+++++|++.+.++..++++|++|.+||++||+|+||
T Consensus 523 ~e~d~~~iA~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~V~~~~~~fp~p~~~ 585 (586)
T PLN02271 523 LESDFETIADFLLRAAQIASAVQREHGKLQKEFLKGLQNNKDIVELRNRVEAFASQFAMPGFD 585 (586)
T ss_pred CcHHHHHHHHHHHHHHhhhhhhhhhcchhhhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999998888888889999999888877778999999999999999999875
No 4
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=2.8e-93 Score=703.38 Aligned_cols=399 Identities=55% Similarity=0.903 Sum_probs=334.0
Q ss_pred ccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC
Q 012104 12 LETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH 91 (471)
Q Consensus 12 ~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg 91 (471)
|++.||++++++++|..||+++|+||||||++||.|+++++|+++|+|+|||||.|||+||+++|++|.+|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHH
Q 012104 92 LDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYD 171 (471)
Q Consensus 92 ~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~ 171 (471)
+++++|.++|||.||++||.+++.+|++|||+||.+++.+|||+|||+.... +++...+.+|++++|++|++++.||+|
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~-~~~~~~~~~~~~~~y~~d~~~~~ID~d 159 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNF-KKISASGLYFESVPYPVDPDTGLIDYD 159 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSH-SBSSHHHHHSEEEEEEB-TTTSSB-HH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccc-cccccccceEEEEeeeeecCCCeECHH
Confidence 9999999999999999999999999999999999999999999999975433 344558888999999999999999999
Q ss_pred HHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe
Q 012104 172 KLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA 251 (471)
Q Consensus 172 ~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg 251 (471)
++++++++++||||+++.|.|++.+|+++|++||+++|++|++|++|.+||+++|.+|+|+++|||+++||||+|+||||
T Consensus 160 ~l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrg 239 (399)
T PF00464_consen 160 ELEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRG 239 (399)
T ss_dssp HHHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-
T ss_pred HHHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
|+|+++++.+.++++++.+. +++.+++++++||++||+|++|.+||+|++|+++++++|++|++|+++|++.|++.|.+
T Consensus 240 giI~~~~~~~~~~~~~~~~~-~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 240 GIILTNKGSKNVDKKGKEID-EELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp EEEEES-SEEEE-TTS-EEE-HHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcCCccccCCcccccH-HHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999965444444343322 37899999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 332 KGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 332 ~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
.|+++++++|++|++|+|+++.++++.+++++|+++||.+|++.+|+|.++..+++||||++++|+||+.++||++|+++
T Consensus 319 ~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 319 RGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 99999999999999999999889999999999999999999999999988888999999999999999999999999998
Q ss_pred H
Q 012104 412 L 412 (471)
Q Consensus 412 i 412 (471)
|
T Consensus 399 I 399 (399)
T PF00464_consen 399 I 399 (399)
T ss_dssp H
T ss_pred C
Confidence 6
No 5
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=2e-83 Score=658.59 Aligned_cols=465 Identities=77% Similarity=1.242 Sum_probs=421.5
Q ss_pred cccccccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHH
Q 012104 5 NEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (471)
Q Consensus 5 ~~~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~ 84 (471)
..|++..|++.|||++++|.+|.+||+++|+||||||++||.|++++++.++++|++|+||.|||+|+++++++|++|++
T Consensus 8 ~~~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~ 87 (475)
T PLN03226 8 PKWGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQK 87 (475)
T ss_pred hhcchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHH
Confidence 34666778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC
Q 012104 85 RALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS 164 (471)
Q Consensus 85 ~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~ 164 (471)
+++++|+++++.|.+||+++||+.||.+++.+|++|||+|++++.+++||++|++.... ..++..+..++.++|+++++
T Consensus 88 ~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g-~~~s~~~~~~~~~~y~~~~~ 166 (475)
T PLN03226 88 RALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDG-KKISATSIYFESMPYRLDES 166 (475)
T ss_pred HHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcc-cccccceEEEEeeeeeecCC
Confidence 99999999998888899999999999999999999999999999999999999875432 34555666778888988888
Q ss_pred CCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCC
Q 012104 165 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHK 244 (471)
Q Consensus 165 ~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K 244 (471)
++.+|+++|++++.+++||+|+++.+.||+..|+++|+++|+++|+++++|+||++|++..+..++|++++|++++|+||
T Consensus 167 ~g~iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK 246 (475)
T PLN03226 167 TGLIDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHK 246 (475)
T ss_pred CCCcCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcc
Confidence 89999999999998788999998888899999999999999999999999999999999888888889999999999999
Q ss_pred cCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 012104 245 SLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVA 324 (471)
Q Consensus 245 ~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~ 324 (471)
||+||+||+|+++++..+...++... ++++.+.++.+.+|+++|+|+++.++++++|++++.+++++++.+++.+|+++
T Consensus 247 ~L~GP~Gg~I~~~~~~~~~~~~g~~~-~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~ 325 (475)
T PLN03226 247 SLRGPRGGMIFFRKGPKPPKGQGEGA-VYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAA 325 (475)
T ss_pred cccCCCceEEEEchhhcccccCCCcc-HHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 99999999999987654333333222 13556678888899999999999999999999999888899999999999999
Q ss_pred HHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHH
Q 012104 325 LGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKD 404 (471)
Q Consensus 325 l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d 404 (471)
|++.|.+.|++++++++++|++++++.+.++++.++.+.|+++||.++++.+|++.++..++++|+|++++|+||++++|
T Consensus 326 L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 326 LANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred HHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 99999999999998888899999999888999999999999999999999999987788889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCC---hHHHHHHHHHHHHHHhcCCCCCCCccccccCC
Q 012104 405 FEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVN---NKDIEALKADVEKFASSFDMPGFKMSEMKYKD 471 (471)
Q Consensus 405 ~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~p~~~~~~~~~~~~~ 471 (471)
|++++++|.++++.....++++++++++|...+.. +..++++|++|.+||++||+|+++..+||||+
T Consensus 406 ~~~ia~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~fp~~~~~~~~~~~~~ 475 (475)
T PLN03226 406 FEKVAEFLHRAVTIALKIQKEHGKKLKDFKKGLESNDFSKDIEALRAEVEEFATSFPMPGFDKESMKYKE 475 (475)
T ss_pred HHHHHHHHHHHHHHhhhhhhhcccchhhhhhhccccccHHHHHHHHHHHHHHHHhCCCCCCCccccccCC
Confidence 99999999999998888877888889998654432 35689999999999999999999999999996
No 6
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.1e-81 Score=633.41 Aligned_cols=430 Identities=38% Similarity=0.648 Sum_probs=388.4
Q ss_pred ccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 012104 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (471)
Q Consensus 10 ~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~l 89 (471)
+.|++.|||++++|++|.+||+++|+||||||++||.|++++++.++|+|+|||||.|||+||+++|++|.+|++|++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHHhcCC-------------------------------CCEEEEeCCCCCCccccc
Q 012104 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEP-------------------------------HDRIMGLDLPSGGHLTHG 138 (471)
Q Consensus 90 fg~~~~~~~~~v~~~sGt~A~~~~~~all~p-------------------------------GD~Vl~~~~~~~g~~s~~ 138 (471)
||+++ +||||+||++||.+++.+|++| ||+||.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 7999999999999999999987 899999999999999999
Q ss_pred ccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 139 YYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 139 ~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
+ +.++.+..+++++|+++++++.+|++++++++.+.+|++|+++.|.+++.+|+++|++||+++|+++++|+||
T Consensus 184 ~------~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 184 F------RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred c------ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECch
Confidence 5 4567888899999999988899999999999998889999999888999999999999999999999999999
Q ss_pred cchhhccccCC---CCCCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHH
Q 012104 219 ISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (471)
Q Consensus 219 ~~glv~~g~~~---~p~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ 295 (471)
++|++..+..+ +|+.++||+++|+||+|+||+||+|++++ ++.+.++++ .|+++|+|+++.
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~---------------~l~~~L~~a-~P~i~gg~l~p~ 321 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK---------------EYADAVDKG-CPLVLGGPLPHV 321 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH---------------HHHHHHhhC-CCcccCCCccHH
Confidence 99999866554 67778999999999999999999999987 677778776 489999999999
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCC
Q 012104 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 296 iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 375 (471)
++|.++++.++.+++|++|++++++|+++|++.|.+.||+++++++++|++++++.+.+.++..+.+.|+++||.++++.
T Consensus 322 iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~e~GI~vn~i~ 401 (493)
T PRK13580 322 MAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALLDAGIVTNRNS 401 (493)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHHHCCeEEcccc
Confidence 99999999999887888999999999999999999999999877799999999998766667788999999999999999
Q ss_pred cCCCC-CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHH
Q 012104 376 VFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFA 454 (471)
Q Consensus 376 ~p~~~-~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 454 (471)
+|+++ +++.+++||||++++|+||++++||++++++|.++++.....+...|++.++ +...++..++++|++|.+||
T Consensus 402 ~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~ 479 (493)
T PRK13580 402 IPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNTTPGTTAEGAPSKA--KYELDEGVAQEVRARVAELL 479 (493)
T ss_pred CCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhhhhccccccccccc--cccCCHHHHHHHHHHHHHHH
Confidence 99986 5566899999999999999999999999999999998654333334555544 33445566889999999999
Q ss_pred hcCCC-CCCCcccc
Q 012104 455 SSFDM-PGFKMSEM 467 (471)
Q Consensus 455 ~~~p~-~~~~~~~~ 467 (471)
++||+ |+++.+++
T Consensus 480 ~~~p~~~~~~~~~~ 493 (493)
T PRK13580 480 ARFPLYPEIDLETL 493 (493)
T ss_pred HhCCCCCccCcccC
Confidence 99999 56776653
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=1.2e-66 Score=536.78 Aligned_cols=441 Identities=67% Similarity=1.082 Sum_probs=385.0
Q ss_pred cccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 012104 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQ 88 (471)
Q Consensus 9 ~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~ 88 (471)
+..|++.|||+++++.+|.+||+++|+|+||||++||.|++++.+.++++|++|+|+.||+.|+++.+.+|+.+++++++
T Consensus 12 ~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~ 91 (452)
T PTZ00094 12 NQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALE 91 (452)
T ss_pred hhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHH
Confidence 44588899999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred hcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCC
Q 012104 89 TFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYI 168 (471)
Q Consensus 89 lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~i 168 (471)
+||+++++|.++++++||+.||.+++.++++|||+|++.+.+|++|++++..... ..+...+..+++.++++++ ++.+
T Consensus 92 lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~-~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 92 AFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAK-KKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccc-cccccceeeeeeeecccCC-CCCc
Confidence 9999987777888999999999999999999999999999999999987632111 1123345556777777774 4899
Q ss_pred CHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCC
Q 012104 169 DYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRG 248 (471)
Q Consensus 169 D~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~G 248 (471)
|++++++++++.+|++|+++.|.+|...|+++|.++|+++|+++++|++|++|++..+..+.|+.++|++++|+||||+|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999977789999887778999999999999999999999999999999988777777777999999999999999
Q ss_pred CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 012104 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (471)
Q Consensus 249 prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~ 328 (471)
|+||++++++++.. .+...++...+|.++|+++.+.++++++|++++...+++++.+++.+++++|.+.
T Consensus 250 P~Gg~l~~~~~~~~-----------~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 250 PRSGLIFYRKKVKP-----------DIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred CCceEEEEecccch-----------HHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99999999764211 2444566677888889999999999999999987778889999999999999999
Q ss_pred HHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 329 LTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 329 L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
|.+.|+++..+++++|.+++++...++++.++...|+++||.++...+|++..+..++++|+|++.+|++|++++||+++
T Consensus 319 L~~~g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l 398 (452)
T PTZ00094 319 LEKRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFV 398 (452)
T ss_pred HHhCCcEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHH
Confidence 98889998765555788888887778899999999999999999887887765556789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCCC
Q 012104 409 GEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGF 462 (471)
Q Consensus 409 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 462 (471)
+++|.+++......+++++++..+|.+...++..++++|++|.+||++||+|+.
T Consensus 399 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 452 (452)
T PTZ00094 399 ADFLDRAVKLAQEIQKQVGKKLVDFKKALEKNPELQKLRQEVVEFASQFPFPGI 452 (452)
T ss_pred HHHHHHHHHHHhhhhhhcccchhhhhhhcccHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999887777777777777765444567789999999999999999973
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.7e-59 Score=476.48 Aligned_cols=412 Identities=53% Similarity=0.809 Sum_probs=358.3
Q ss_pred cccccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 012104 7 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (471)
Q Consensus 7 ~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~ 86 (471)
|+++.|+++|||++++|++|.++|+++|+|+||||+++|.|++++.+.+.++|+.|++|.|+++|++.++.+|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~l 83 (416)
T PRK13034 4 FFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERA 83 (416)
T ss_pred hhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999899999
Q ss_pred HHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC
Q 012104 87 LQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (471)
Q Consensus 87 ~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~ 166 (471)
+++||.++ +.+.+.||+.||.+++.++++|||+|++.+..|++|+.+|. .....+..++.+.+++++.++
T Consensus 84 a~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 84 KQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA------KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC------cceeccceeeeEEcccccccC
Confidence 99999986 56778899999999999999999999999999998776553 233344444545677776778
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcC
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSL 246 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l 246 (471)
.+|++++++.+...+||+|+++.+.+|...|+++|.++|+++|+++++|++|++|..+.|..+.++.++|++++|+||+|
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999998766899999877778999999999999999999999999999999888877777778999999999999
Q ss_pred CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 012104 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALG 326 (471)
Q Consensus 247 ~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~ 326 (471)
+||.||+++++++ .+.++++...+++++++++.+.+++.+.++.+...++..++.+++.+|+++|+
T Consensus 234 ~g~~GG~v~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~ 299 (416)
T PRK13034 234 RGPRGGMILTNDE--------------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALA 299 (416)
T ss_pred CCCCCeEEEECcH--------------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 9999999998764 45566777788887788888888888888888765556788999999999999
Q ss_pred HHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC-CCCCCCeeEEecCCCCCcCCCHHHH
Q 012104 327 NYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 327 ~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
+.|.+.|+++..+++++|++++++...+.+...+.+.|++.||.++...+|++. .|..++++|+|++++|+++++++|+
T Consensus 300 ~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di 379 (416)
T PRK13034 300 EVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEF 379 (416)
T ss_pred HHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHH
Confidence 999999999864446889999998877778888889999999999988788754 5666789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCC
Q 012104 406 EQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 460 (471)
Q Consensus 406 ~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~ 460 (471)
++++++|.+++... .+...++.+|++|.+|++.||+|
T Consensus 380 ~~l~~~l~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 416 (416)
T PRK13034 380 REIANWILDVLDDL------------------GNAALEQRVRKEVKALCSRFPIY 416 (416)
T ss_pred HHHHHHHHHHHhcC------------------CCHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999998742 12344789999999999999975
No 9
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=3e-52 Score=427.21 Aligned_cols=413 Identities=50% Similarity=0.775 Sum_probs=345.2
Q ss_pred cccccccccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 012104 7 WGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (471)
Q Consensus 7 ~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~ 86 (471)
|+.+.|++.||+++++|+++.+++++.|+|++++|+++|+|++++...+.++|..|+++++++.|.+..+.+|+.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~l 80 (416)
T PRK00011 1 FFMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRA 80 (416)
T ss_pred CcchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999998888899899999999999999999998888999
Q ss_pred HHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC
Q 012104 87 LQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (471)
Q Consensus 87 ~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~ 166 (471)
++++|+++ ..|.++||+.|+.+++.++++|||+|++.+++|++|++++. .+...+.+.+++.++++++++
T Consensus 81 a~~~g~~~----~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~ 150 (416)
T PRK00011 81 KELFGAEY----ANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS------PVNFSGKLYNVVSYGVDEETG 150 (416)
T ss_pred HHHhCCCc----eeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc------ccccccceeeEeecCcCcccC
Confidence 99999986 35667889999999999999999999999999998875442 122234445666777775668
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcC
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSL 246 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l 246 (471)
.+|++++++++++.+|++|++..+.+|...|+++|.++|+++|+++++|++|++|+++.|..+.++.++|++++|+||+|
T Consensus 151 ~~d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l 230 (416)
T PRK00011 151 LIDYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTL 230 (416)
T ss_pred CcCHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCC
Confidence 99999999999766899998876678887899999999999999999999998888776655666668899999999999
Q ss_pred CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 012104 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALG 326 (471)
Q Consensus 247 ~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~ 326 (471)
+||+||+++++++ ++.+++.....++..+++....++++..++.++...+++++.+++.+++++++
T Consensus 231 ~g~~gg~i~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 296 (416)
T PRK00011 231 RGPRGGLILTNDE--------------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALA 296 (416)
T ss_pred CCCCceEEEeCCH--------------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 9999999999753 56677766666666677777788887777777665567889999999999999
Q ss_pred HHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC-CCCCCCeeEEecCCCCCcCCCHHHH
Q 012104 327 NYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 327 ~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
+.|++.|+++...++.++++|+++.+.+++..++.+.|.++||.++....|.+. ++..+.++|+|+...++++++++|+
T Consensus 297 ~~L~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di 376 (416)
T PRK00011 297 EALAERGFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEM 376 (416)
T ss_pred HHHHhCCCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHH
Confidence 999999998764345568889988655667788989999999999876655542 3445678999988888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCC
Q 012104 406 EQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 461 (471)
Q Consensus 406 ~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~ 461 (471)
+++++.|.+++.... ++..+++++++|.+|+++||.|.
T Consensus 377 ~~l~~~l~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~ 414 (416)
T PRK00011 377 KEIAELIADVLDNPD------------------DEAVIEEVKEEVKELCKRFPLYK 414 (416)
T ss_pred HHHHHHHHHHHhccC------------------cchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999876532 34557899999999999999654
No 10
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=2.3e-49 Score=404.20 Aligned_cols=400 Identities=57% Similarity=0.894 Sum_probs=330.8
Q ss_pred ccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC
Q 012104 14 TVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD 93 (471)
Q Consensus 14 ~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~ 93 (471)
++|+|++++|.+|..+|+++|+|+|++|+++|.|++++.+.+..+|+.|+|+.++|+|.+..+.+|+.+++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~ 81 (402)
T cd00378 2 DVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred CcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999999999999999999998888999999999999999999999988888999999998
Q ss_pred CCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHH
Q 012104 94 PTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKL 173 (471)
Q Consensus 94 ~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~l 173 (471)
+ +.|.++||++|+.+++.++++|||+|++.+|+|++|++++... .+...|..+..++++.+++++.+|++++
T Consensus 82 ~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 82 Y----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT----KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred c----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc----cccccceeEEEecCCcCcccCCcCHHHH
Confidence 6 4677788999999999999999999999999999988764311 1223454444455544433689999999
Q ss_pred HHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCeEE
Q 012104 174 EEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGM 253 (471)
Q Consensus 174 e~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~GprgG~ 253 (471)
++.+...+|++|+++++.+|...|+++|.++|+++|++|++|++|.+|+++.|..+.++.++|++++|+||+|+|||||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99997678999987766778888999999999999999999999988888776555556678999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
++++++ ++.+++.....++..++++...+++++.++.+....+++++.+++.++++++.+.|.+.|
T Consensus 234 i~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 299 (402)
T cd00378 234 ILTRKG--------------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERG 299 (402)
T ss_pred EEeccH--------------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999874 466666655566667777778888888788776554667888999999999999999999
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCC-CCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSS-ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~-~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.++..+..++++|+++.+.+.+...+.+.|+++||.+++...|+... +....++|||+...+++|++++|++++++.|
T Consensus 300 ~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l 379 (402)
T cd00378 300 FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFI 379 (402)
T ss_pred CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHH
Confidence 988654566889999987656677788888999999999876676542 3345789999998888899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHH
Q 012104 413 HRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKF 453 (471)
Q Consensus 413 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 453 (471)
.++++... +-...+.++++|.+|
T Consensus 380 ~~~~~~~~------------------~~~~~~~~~~~~~~~ 402 (402)
T cd00378 380 ARALKDAE------------------DVAVAEEVRKEVAEL 402 (402)
T ss_pred HHHHhccc------------------chhhHHHHHHHHhcC
Confidence 99887532 112347888888764
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-30 Score=259.76 Aligned_cols=355 Identities=18% Similarity=0.156 Sum_probs=255.0
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCC-CCCceeeecCChHHHHHHHHHHh-
Q 012104 40 ENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSGSPANFAAYTAV- 117 (471)
Q Consensus 40 ~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~-~~~~~~v~~~sGt~A~~~~~~al- 117 (471)
....|..|++++...+.+.++....+ -+.-........+.+|+.+++++|++. + ..+.+.+.|.|+..+..++
T Consensus 31 ~~~~p~~V~~a~~~~~~~~~an~~r~--~~~~~~~~t~~~e~aRe~va~~~~a~~~~---eIvft~~tT~aln~va~~l~ 105 (405)
T COG0520 31 TSQKPQAVLDAVAEYYRRYNANVHRG--AHTLAEEATDLYEAAREAVARFLNADSSD---EIVFTRGTTEALNLVARGLG 105 (405)
T ss_pred cccCCHHHHHHHHHHHHhhcCCcCcc--cchHHHHHHHHHHHHHHHHHHHhCCCCCC---eEEEeCChhHHHHHHHHHhh
Confidence 34468899999988776666533222 122223333344468999999999985 4 2344555567999999988
Q ss_pred --cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCC
Q 012104 118 --LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYP 193 (471)
Q Consensus 118 --l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g 193 (471)
+++||+|++.+.+|.+.+.-+. .+ ....+.++..++++ +++.+|.|+++.++. .++|+|.++ .|.+|
T Consensus 106 ~~~~~gdeIv~s~~EH~sn~~pw~------~~-~~~~Ga~v~~i~~~-~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG 176 (405)
T COG0520 106 RSLKPGDEIVVSDLEHHSNIVPWQ------EL-AKRTGAKVRVIPLD-DDGLLDLDALEKLIT-PKTKLVALSHVSNVTG 176 (405)
T ss_pred hhhcCCCEEEEccCcchhhHHHHH------HH-HHhcCcEEEEEecC-CCCCcCHHHHHHhcC-CCceEEEEECcccccc
Confidence 7999999999999876643211 11 11123455666667 679999999999776 489999877 56799
Q ss_pred ccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC----CCCCC
Q 012104 194 RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK----PPKKG 266 (471)
Q Consensus 194 ~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~----~~~~~ 266 (471)
...|+++|.++||++|+++++|++|++|. .|..+. +||++++|.||||.||.| |++.+++++. +...+
T Consensus 177 ~~~pv~~I~~la~~~ga~v~VDaaq~~~h-----~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~g 251 (405)
T COG0520 177 TVNPVKEIAELAHEHGALVLVDAAQAAGH-----LPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGG 251 (405)
T ss_pred ccchHHHHHHHHHHcCCEEEEECccccCc-----cCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccC
Confidence 99999999999999999999999998663 344454 899999999999999987 8888888643 33334
Q ss_pred CCCCcccchHh--hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCC
Q 012104 267 QPEGAVYDFED--KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTEN 343 (471)
Q Consensus 267 ~~~i~~~~l~~--~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~ 343 (471)
|..+.+.+... ..+........|+|+...+.+++.|++.+...++.+..++....+.++.+.|.+. +++++..+...
T Consensus 252 g~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~ 331 (405)
T COG0520 252 GGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDAD 331 (405)
T ss_pred CCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCccc
Confidence 54443111101 1112222234588999999999999999887788889999999999999999987 78886533212
Q ss_pred eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..-++.|.-.+++..++...|.+.||.++.+..+..+ .--..+.+|+|+..+++ ++|++++++.|+++..
T Consensus 332 r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt----~edid~l~~aL~~~~~ 404 (405)
T COG0520 332 RGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNT----EEDVDRLLEALKKALA 404 (405)
T ss_pred CceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCC----HHHHHHHHHHHHHHhh
Confidence 2334444445778999999999999999987533211 11123459999988876 8999999999988653
No 12
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.98 E-value=1.1e-29 Score=241.76 Aligned_cols=342 Identities=22% Similarity=0.294 Sum_probs=254.2
Q ss_pred cCCeeEe-cCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCC-CCCceeeecCChH
Q 012104 31 CRGIELI-ASENF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSGS 107 (471)
Q Consensus 31 ~~~i~li-~s~n~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~-~~~~~~v~~~sGt 107 (471)
.+.|+|. |..+| ++|+|++|+...+.+.- .|||.. ..++.+. .+++.++.++.+. .+| .+...+..
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGv-fGY~~~----~~~~~~a----i~~w~~~r~~~~i~~e~--i~~~p~VV 93 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGV-FGYPYG----SDELYAA----IAHWFKQRHQWEIKPEW--IVFVPGVV 93 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCC-CCCCCC----CHHHHHH----HHHHHHHhcCCCCCcce--EEEcCcch
Confidence 3567774 44576 48999999998886653 478732 2223333 4577888887654 334 34344556
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII- 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi- 186 (471)
.++..+++++.+|||.|++..|.|..++. .+...|+.+-..++..+...+.||+++||+.+.+.++|+.+
T Consensus 94 pgi~~~I~~~T~~gd~Vvi~tPvY~PF~~---------~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iL 164 (388)
T COG1168 94 PGISLAIRALTKPGDGVVIQTPVYPPFYN---------AIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFIL 164 (388)
T ss_pred HhHHHHHHHhCcCCCeeEecCCCchHHHH---------HHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEE
Confidence 89999999999999999999999987642 33445554433333323344677999999999887777554
Q ss_pred Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhccccCCCCCC-----Ccc--EEEeCCCCc--CCCCCeEE
Q 012104 187 CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQEAANPFE-----YCH--IVTTTTHKS--LRGPRAGM 253 (471)
Q Consensus 187 ~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-----~aD--iv~~s~~K~--l~GprgG~ 253 (471)
|+ +||+|+++.-++ |.+||.+||++||+|+.|. .++..|..+.|+. .+| +.++|.+|+ ++|.+++.
T Consensus 165 CnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHa-Dlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~ 243 (388)
T COG1168 165 CNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHA-DLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAY 243 (388)
T ss_pred eCCCCCCCccccHHHHHHHHHHHHHcCCEEEeecccc-cccccCCCccchhhcChhhhcceEEEeeccccccchhhhhee
Confidence 88 899999997664 5689999999999999998 8998884333332 345 778899999 78999988
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~- 332 (471)
++..++ +++.+..+......+++|+...+.|.-+|+++- .+++.+..+.+.+|.+++.+.|.+.
T Consensus 244 ~Ii~n~--------------~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~ 308 (388)
T COG1168 244 IIISNR--------------ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHL 308 (388)
T ss_pred EEecCH--------------HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 877764 454433332223345678888888888888875 5688999999999999999999987
Q ss_pred -CceEeeCCCCCeeEEEEccCCCCCHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHH
Q 012104 333 -GYSLVTGGTENHLVLWDLRPLGLTGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 410 (471)
Q Consensus 333 -g~~i~~~~~~~~~~~v~~~~~~~~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~ 410 (471)
++++. .+.+++++|+|++..+++..+. +.++++++|.+++|..+|.. +.+.+|+.+ .|+|...++.+++++.
T Consensus 309 P~v~v~-~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~---g~gf~RlN~--acpr~~L~eal~ri~~ 382 (388)
T COG1168 309 PGVKVT-EPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEE---GSGFVRLNF--ACPRAILEEALERLKR 382 (388)
T ss_pred CCcEEe-cCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcC---CCceEEEec--CCCHHHHHHHHHHHHH
Confidence 88884 5688999999999999987666 56668999999999888754 368999998 6777777888888876
Q ss_pred HHHH
Q 012104 411 FLHR 414 (471)
Q Consensus 411 ~i~~ 414 (471)
.++.
T Consensus 383 al~~ 386 (388)
T COG1168 383 ALKK 386 (388)
T ss_pred HHhc
Confidence 6643
No 13
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.97 E-value=2.5e-29 Score=252.43 Aligned_cols=344 Identities=18% Similarity=0.119 Sum_probs=234.6
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHH
Q 012104 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (471)
Q Consensus 34 i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~ 113 (471)
++++|++..++++|++++.+.+.+ .++- ...+..+ .+++++++++|++..+ +.+.+.||++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~~--------~~~~---~~~~~~~-~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPMLG--------HRSP---EFLALMD-EILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCccC--------CCCH---HHHHHHH-HHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 478999999999999999643211 1111 1222233 3568899999995432 345677889999999
Q ss_pred HHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCC
Q 012104 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSA 191 (471)
Q Consensus 114 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~ 191 (471)
+.++++|||+|++.++.|.++. +. ..+...| .+++.+++++ ++.+|++++++.+.+++|++|++. +|+
T Consensus 67 ~~~~~~~g~~vl~~~~~~~~~~---~~----~~~~~~g--~~~~~v~~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~ 136 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGVFGDR---WA----DMAERYG--ADVDVVEKPW-GEAVSPEEIAEALEQHDIKAVTLTHNETS 136 (356)
T ss_pred HHHhCCCCCEEEEecCCchhHH---HH----HHHHHhC--CCeEEeecCC-CCCCCHHHHHHHHhccCCCEEEEeccCCC
Confidence 9999999999999987665421 10 0112234 3455555563 478999999999976589988753 578
Q ss_pred CCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCCC-C
Q 012104 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPKK-G 266 (471)
Q Consensus 192 ~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~~-~ 266 (471)
+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|.+|.| |+++.+++.. .... .
T Consensus 137 ~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~ 211 (356)
T cd06451 137 TGVLNPLEGIGALAKKHDALLIVDAVSSLGGE-----PFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKT 211 (356)
T ss_pred cccccCHHHHHHHHHhcCCEEEEeeehhccCc-----cccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcC
Confidence 99999999999999999999999999976532 22222 679999999999998876 8888876421 0000 0
Q ss_pred CCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC--CC
Q 012104 267 QPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT--EN 343 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~--~~ 343 (471)
+...+..++........ .....++++...++++..+++.+...++++..++..++++++.+.|++.|++++..+. .+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~ 291 (356)
T cd06451 212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSP 291 (356)
T ss_pred CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCC
Confidence 00000000000000000 0123456777777788788877766677888899999999999999988998864221 22
Q ss_pred eeEEEEccCCCCCHHHHHHHHhhc-CeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCDLC-NITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.++++.+. .+.+..++.+.|.+. ||.+.++..+ ..+++||+++...++ ++|++++.+.|.+++
T Consensus 292 ~~~~~~~~-~~~~~~~~~~~L~~~~gI~~~~g~~~-----~~~~~iRis~~~~~~----~e~v~~~~~~l~~~~ 355 (356)
T cd06451 292 TVTAVLVP-EGVDGDEVVRRLMKRYNIEIAGGLGP-----TAGKVFRIGHMGEAT----REDVLGVLSALEEAL 355 (356)
T ss_pred ceEEEECC-CCCCHHHHHHHHHHhCCEEEeccccc-----ccCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 33455553 356788888888887 9999875422 134699999866644 899999999998865
No 14
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=3.1e-29 Score=243.57 Aligned_cols=339 Identities=19% Similarity=0.217 Sum_probs=252.3
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-
Q 012104 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV- 117 (471)
Q Consensus 39 s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al- 117 (471)
....+.|+|+++|...++..| |+|.+-+..|.+....+|+ |++.++++.|+++.+ .+++++||++|++++.+.
T Consensus 9 ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve~-AR~~iA~llga~~~e---IiFTSG~TEsnNlaI~g~~ 82 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVEE-AREQIAKLLGADPEE---IIFTSGATESNNLAIKGAA 82 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHHH-HHHHHHHHhCCCCCe---EEEecCCcHHHHHHHHhhH
Confidence 445678999999999998876 7888766667777777774 789999999999853 466667789999888763
Q ss_pred -c----CCCCEEEEeCCCCCCcccccccccCCcccee-ccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--C
Q 012104 118 -L----EPHDRIMGLDLPSGGHLTHGYYTSGGKKISA-TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--G 189 (471)
Q Consensus 118 -l----~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~ 189 (471)
. +.|.+|++...+|.+.+.. +.. ...++++.+++|+ .+|.+|+++|++++++ ++-||.+. +
T Consensus 83 ~a~~~~~~~~HIIts~iEH~aVl~~---------~~~Le~~g~~Vtyl~V~-~~G~v~~e~L~~al~~-~T~LVSim~aN 151 (386)
T COG1104 83 LAYRNAQKGKHIITSAIEHPAVLNT---------CRYLERQGFEVTYLPVD-SNGLVDLEQLEEALRP-DTILVSIMHAN 151 (386)
T ss_pred HhhhcccCCCeEEEcccccHHHHHH---------HHHHHhcCCeEEEeCCC-CCCeEcHHHHHHhcCC-CceEEEEEecc
Confidence 2 2578999999888765531 122 2335777788888 4799999999999974 45666543 6
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKG 266 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~ 266 (471)
|.+|.++|+++|.++|+++|+++++|++|+.| ..|.++. ++|++++|.|| +.||+| |+++.++.++.
T Consensus 152 nE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~G-----kipi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~~~---- 221 (386)
T COG1104 152 NETGTIQPIAEIGEICKERGILFHVDAVQAVG-----KIPIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGVRL---- 221 (386)
T ss_pred cCeeecccHHHHHHHHHHcCCeEEEehhhhcC-----ceeccccccCcceEEeehhh-ccCCCceEEEEECCCCcc----
Confidence 77999999999999999999999999999877 3454554 59999999999 799998 88887664311
Q ss_pred CCCCcccchHhhhhh-cCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEeeCCC-
Q 012104 267 QPEGAVYDFEDKINF-AVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVTGGT- 341 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~-~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~~~~- 341 (471)
...+.. ....+ -.|+.+.+.+++++.|++.+. .+++....++....++|.+.|.+. ++.+.....
T Consensus 222 ---------~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~-~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~ 291 (386)
T COG1104 222 ---------EPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAV-EELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEP 291 (386)
T ss_pred ---------CceeccCcCCCCCCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccc
Confidence 111100 00111 136778999999999998875 477888888889999999999875 444432211
Q ss_pred -CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--C------------CCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 342 -ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--S------------ALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 342 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~------------~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
-.|.+.+.+ .++.++.+...|+..||.++.++.+... . ....+.||||+...|+ ++|++
T Consensus 292 rlP~~~~~~f--~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt----~eei~ 365 (386)
T COG1104 292 RLPNILNFSF--PGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTT----EEEID 365 (386)
T ss_pred CCCCeEEEEe--CCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCC----HHHHH
Confidence 223444444 4788999999999999999999755332 1 1224789999977665 89999
Q ss_pred HHHHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTLTL 420 (471)
Q Consensus 407 ~l~~~i~~~l~~~~ 420 (471)
++++.+.+++....
T Consensus 366 ~~~~~l~~~i~~lr 379 (386)
T COG1104 366 AAAEALKEIIKRLR 379 (386)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887643
No 15
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=1.5e-28 Score=247.67 Aligned_cols=340 Identities=19% Similarity=0.187 Sum_probs=238.5
Q ss_pred CCeeEecCCC-C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-HH
Q 012104 32 RGIELIASEN-F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (471)
Q Consensus 32 ~~i~li~s~n-~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t~ 108 (471)
+.|+|..++. + +++.+++++...+.+... +| + ..+.+.++.+...++..+.+|.+.+.- -+|..++| ++
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y-----~-~~~G~~~LReaia~~~~~~~~~~~~~~-~eiivt~Ga~~ 100 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HY-----T-PSAGIPELREAIAEKYKRRYGLDVDPE-EEIIVTAGAKE 100 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CC-----C-CCCCCHHHHHHHHHHHHHHhCCCCCCC-CeEEEeCCHHH
Confidence 5799988875 3 467788888876654311 12 1 223334566666677888888544321 22555555 57
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC--CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS--STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~--~~~~iD~~~le~~~~~~~pklIi 186 (471)
|+..+++++++|||+|++++|.|..|.. .+.+.|. ++++++++. .++.+|+++|++.+.. ++|+|+
T Consensus 101 al~~~~~a~~~pGDeVlip~P~Y~~y~~---------~~~~~gg--~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ 168 (393)
T COG0436 101 ALFLAFLALLNPGDEVLIPDPGYPSYEA---------AVKLAGG--KPVPVPLDEEENGFKPDLEDLEAAITP-KTKAII 168 (393)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCHHH---------HHHhcCC--EEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEE
Confidence 9999999999999999999999987753 2334554 444554433 3699999999999987 899888
Q ss_pred Ec--CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcccc-CCCCCC--C-cc--EEEeCCCCc--CCCCCeEE
Q 012104 187 CG--GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE--Y-CH--IVTTTTHKS--LRGPRAGM 253 (471)
Q Consensus 187 ~~--~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~~--~-aD--iv~~s~~K~--l~GprgG~ 253 (471)
++ +||||.+.+.+ +|+++|++||++|++|++|. ++++.+. +++.+. . .| |++.|+||+ |+|+|.||
T Consensus 169 ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~-~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~ 247 (393)
T COG0436 169 LNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYE-ELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGW 247 (393)
T ss_pred EeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhh-hcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeE
Confidence 65 78999998755 66688999999999999998 9999884 555554 2 23 888999999 89999999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST-PAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~-~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
++++++ ++.+.+.+.......+.+...+.++. .||..-.. ...+...+...++++.+.+.|.+.
T Consensus 248 ~v~~~~--------------~l~~~~~~~~~~~~~~~~~~~Q~aa~-~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 312 (393)
T COG0436 248 VVGPPE--------------ELIAALRKLKSYLTSCAPTPAQYAAI-AALNGPQSDEVVEEMREEYRERRDLLVEALNEI 312 (393)
T ss_pred eecChH--------------HHHHHHHHHHHhcccCCCHHHHHHHH-HHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999842 44444432211122345555555444 46664321 344566678899999999999987
Q ss_pred -CceEeeCCCCCeeEEEEccCCCCCHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHH
Q 012104 333 -GYSLVTGGTENHLVLWDLRPLGLTGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 410 (471)
Q Consensus 333 -g~~i~~~~~~~~~~~v~~~~~~~~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~ 410 (471)
|+.+...+.+.+++|++++.. .+..++ .++|++.||.|.|++.++.. ...+++||++ .++ ++.+++..+
T Consensus 313 ~g~~~~~~p~Ga~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg~~--~g~~~vRis~--~~~----~~~l~~a~~ 383 (393)
T COG0436 313 GGLSVVKPPEGAFYLFPKIPEL-LDSEEFAKKLLEEAGVAVVPGSGFGEP--PGEGYVRLSL--ATS----EETLEEALR 383 (393)
T ss_pred CCeeeccCCCeeEEEEeecCCC-CCHHHHHHHHHHhCCEEEecccccCCC--CCCCeEEEEE--ecC----HHHHHHHHH
Confidence 588865466788899998654 566665 78889999999998877743 2458999998 332 355555555
Q ss_pred HHHHHH
Q 012104 411 FLHRAV 416 (471)
Q Consensus 411 ~i~~~l 416 (471)
.|.+.+
T Consensus 384 rl~~~~ 389 (393)
T COG0436 384 RLARFL 389 (393)
T ss_pred HHHHHH
Confidence 555544
No 16
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.96 E-value=1.4e-27 Score=245.31 Aligned_cols=343 Identities=15% Similarity=0.176 Sum_probs=239.3
Q ss_pred cCCeeEecCCC---CCcHH----HHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeec
Q 012104 31 CRGIELIASEN---FTSFA----VIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP 103 (471)
Q Consensus 31 ~~~i~li~s~n---~~s~~----v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~ 103 (471)
.+.++|-.++. +.+|+ +.+++...+... ...|++...+.+++ +.++++||.++ + +.+
T Consensus 36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lr----eaia~~~~~~~----v-v~t 99 (460)
T PRK13238 36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-------DEAYAGSRSYYRLE----DAVKDIFGYPY----T-IPT 99 (460)
T ss_pred CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-------CcccCCCCCHHHHH----HHHHHHhCCCc----E-EEC
Confidence 36788877764 55443 666666555321 12344555566666 56788898765 3 668
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC---------CCCCCCHHHHH
Q 012104 104 YSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS---------STGYIDYDKLE 174 (471)
Q Consensus 104 ~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~---------~~~~iD~~~le 174 (471)
+||+.|+.+++.++++||| |++++|.|..+.. .+...|. +++.+++++ .++.+|+++|+
T Consensus 100 ~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~---------~i~~~G~--~~v~v~~~~~~~~~~~~~f~g~id~e~Le 167 (460)
T PRK13238 100 HQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRA---------HIELNGA--TAVDLVIDEALDTGSRHPFKGNFDLEKLE 167 (460)
T ss_pred CCHHHHHHHHHHHhCCCCC-EEccCCcccchHH---------HHHHcCC--EEEEEeccccccccccccccCCcCHHHHH
Confidence 8999999999999999999 8877775554322 1233443 444444432 23459999999
Q ss_pred HHhhh---CCCcEEEEc--CCCCC-cccc---HHHHHHHHHHhCCEEEEeccccch-hhcc-----ccCCCC--------
Q 012104 175 EKALD---FRPKLIICG--GSAYP-RDWD---YARFRAVADKCGALLLCDMAHISG-LVAA-----QEAANP-------- 231 (471)
Q Consensus 175 ~~~~~---~~pklIi~~--~s~~g-~~~d---~~~i~~ia~~~g~~livD~a~~~g-lv~~-----g~~~~p-------- 231 (471)
+.+.+ .++++|+++ +|++| .+++ +++|+++|+++|++|++|++|..+ +.+. +....+
T Consensus 168 ~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~ 247 (460)
T PRK13238 168 ALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREM 247 (460)
T ss_pred HHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhh
Confidence 99975 357888765 66776 6665 468889999999999999998653 3221 111111
Q ss_pred CCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC--CC--CCCCCcHHHHHHHHHHHHHhc
Q 012104 232 FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF--PS--LQGGPHNHQIGALAVALKQAS 307 (471)
Q Consensus 232 ~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~--~~--~~g~p~~~~iaa~a~al~~~~ 307 (471)
..++|++++|++|.+.+|.||+++++++ ++.++++...+ .+ .+|+++...++|+++++.+..
T Consensus 248 ~s~~D~~~~Sg~K~g~~~~GG~i~~~d~--------------~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~ 313 (460)
T PRK13238 248 FSYADGLTMSAKKDAMVNIGGLLCFRDE--------------DLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGM 313 (460)
T ss_pred cccCcEEEEecccCCCCcceeEEEcChH--------------HHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhh
Confidence 2368999999999999999999999864 67777765532 22 356667777888998888765
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC-------CCCHH-HHHHHHhhcCeEeccCCcC--
Q 012104 308 TPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL-------GLTGN-KVEKLCDLCNITVNKNAVF-- 377 (471)
Q Consensus 308 ~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~-------~~~~~-~~~~~L~~~gI~v~~~~~p-- 377 (471)
.+ .|.+...+++++|.+.|.+.|++++. +.++|++++|+... +..+. .+.+++++.||.+.++..+
T Consensus 314 ~~---~~~~~~~~~~~~l~~~L~~~G~~~~~-p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~ 389 (460)
T PRK13238 314 DE---DYLAYRIGQVEYLGEGLEEAGVPIQT-PAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLL 389 (460)
T ss_pred Ch---HHHHHHHHHHHHHHHHHHHCCCCeEc-cCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceec
Confidence 53 44555566789999999999999864 57789999998642 22334 4578889999999876522
Q ss_pred -CCCC-----CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 378 -GDSS-----ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 378 -~~~~-----~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
.|+. +.....+|++++ +|+.+.+.|+.+++.|..+.+....+
T Consensus 390 ~~~~~~~~~~~~~~~~~Rla~~---rr~~~~~~~~~~~~~l~~~~~~~~~~ 437 (460)
T PRK13238 390 GRDPKTGEQLPAPAELLRLAIP---RRVYTQSHMDYVAEALKAVKENRESI 437 (460)
T ss_pred ccCCCCccccCCccceEEEecc---cccCCHHHHHHHHHHHHHHHHhHhhc
Confidence 2221 112479999974 78999999999999999987665433
No 17
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=2.6e-27 Score=241.68 Aligned_cols=358 Identities=17% Similarity=0.177 Sum_probs=241.1
Q ss_pred CeeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhcCC-CCCCCceeeecCChHHH
Q 012104 33 GIELI-ASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHL-DPTQWGVNVQPYSGSPA 109 (471)
Q Consensus 33 ~i~li-~s~n~~s~~v~~a~~~~l~~~~~~g~~~~-r~~~g~~~~~~lE~~~~~~~~~lfg~-~~~~~~~~v~~~sGt~A 109 (471)
.+-|- ++....|+.|++++...+.+.+ +.++. .+..+....+.+++ +++.+++++|+ +.+ ..+.+.|+|++
T Consensus 20 ~~yld~a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~---~i~~~~~~t~~ 93 (401)
T PRK10874 20 GVYLDSAATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEA-AREQVAQLLNAPDAK---NIVWTRGTTES 93 (401)
T ss_pred eEEEeCCcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHcCCCCCC---EEEEECCHHHH
Confidence 34443 4556788999999988876544 44432 22233445555664 57889999999 443 23445566789
Q ss_pred HHHHHHHh----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE
Q 012104 110 NFAAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 110 ~~~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI 185 (471)
+.+++.++ ++|||+|++.+++|++.+.... ......|. +++.++++ .++.+|++++++.+. .++++|
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~i~-~~t~lv 164 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWL-----MVAQQTGA--KVVKLPLG-ADRLPDVDLLPELIT-PRTRIL 164 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHH-----HHHHHhCC--EEEEEecC-CCCcCCHHHHHHhcC-cCcEEE
Confidence 99999887 4899999999998876431110 01122343 44555555 457899999999986 478988
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGP 260 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~ 260 (471)
++. +|++|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||. .||.| |+++.+++.
T Consensus 165 ~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~ 238 (401)
T PRK10874 165 ALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF-----PADVQALDIDFYAFSGHKL-YGPTGIGVLYGKSEL 238 (401)
T ss_pred EEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccc-----cCCchhcCCCEEEEecccc-cCCCccEEEEEchHH
Confidence 744 67899999999999999999999999999976532 22232 589999999995 58876 888877653
Q ss_pred CC-CCC---CCCCCcccchHh-hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012104 261 KP-PKK---GQPEGAVYDFED-KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (471)
Q Consensus 261 ~~-~~~---~~~~i~~~~l~~-~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~ 334 (471)
.. ..+ ++.......+.. ...........|+|+...++++..|++.+.+.++.+..++..+.++++.+.|++. |+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 318 (401)
T PRK10874 239 LEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF 318 (401)
T ss_pred HhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 11 111 111000000000 0000001123478888888889888887665566677778888899999999887 88
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--CC-CCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--SA-LAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~-~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
.++.. ..+.++++.+. +++++++.+.|.+.||.++.+..+..+ .. -..+++|+++...++ ++|++++.++
T Consensus 319 ~~~~~-~~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt----~edid~ll~a 391 (401)
T PRK10874 319 RSFRC-QDSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNT----QSDVDALVNA 391 (401)
T ss_pred EEeCC-CCCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCC----HHHHHHHHHH
Confidence 87543 34556666653 467788888999999999887543210 00 014789999977765 8999999999
Q ss_pred HHHHHHH
Q 012104 412 LHRAVTL 418 (471)
Q Consensus 412 i~~~l~~ 418 (471)
|.+++..
T Consensus 392 l~~~~~~ 398 (401)
T PRK10874 392 VDRALEL 398 (401)
T ss_pred HHHHHHH
Confidence 9887653
No 18
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.7e-27 Score=230.14 Aligned_cols=350 Identities=17% Similarity=0.121 Sum_probs=252.4
Q ss_pred CeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 33 ~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
.+.|+|++..++++|+++|.....++++ .++.+.+++ +.+.++.+|+++. .+ +.+.+.|||.|+.+
T Consensus 6 ~~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~~~-~~~~L~~v~~t~~-~~-~~ll~gsGt~amEA 71 (383)
T COG0075 6 RLLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIMKE-VLEKLRKVFGTEN-GD-VVLLSGSGTLAMEA 71 (383)
T ss_pred ceeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHHHH-HHHHHHHHhcCCC-Cc-EEEEcCCcHHHHHH
Confidence 4789999999999999999876655442 245555554 5688999999883 12 66778999999999
Q ss_pred HHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-CCcEEEE--cC
Q 012104 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIIC--GG 189 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-~pklIi~--~~ 189 (471)
++.++++|||+||+......|+ .+. ..+...|..+ +.+... ....+|++++++.+++. ..++|.+ +.
T Consensus 72 av~sl~~pgdkVLv~~nG~FG~---R~~----~ia~~~g~~v--~~~~~~-wg~~v~p~~v~~~L~~~~~~~~V~~vH~E 141 (383)
T COG0075 72 AVASLVEPGDKVLVVVNGKFGE---RFA----EIAERYGAEV--VVLEVE-WGEAVDPEEVEEALDKDPDIKAVAVVHNE 141 (383)
T ss_pred HHHhccCCCCeEEEEeCChHHH---HHH----HHHHHhCCce--EEEeCC-CCCCCCHHHHHHHHhcCCCccEEEEEecc
Confidence 9999999999999998544443 221 1123344434 344333 45689999999999843 3455553 46
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCC-CCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKK 265 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~-~~~ 265 (471)
+++|...|+++|+++|++||++++||+.-+.|- .+..++ +.|+++++.+|+|.+|.| |++..++...+ ...
T Consensus 142 TSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg-----~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~ 216 (383)
T COG0075 142 TSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGG-----EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEE 216 (383)
T ss_pred CcccccCcHHHHHHHHHHcCCEEEEEecccCCC-----cccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhc
Confidence 789999999999999999999999999877553 233444 799999999999999998 77777654211 111
Q ss_pred CCCCCcccchHhhhhhcCC-CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC-CCC
Q 012104 266 GQPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG-TEN 343 (471)
Q Consensus 266 ~~~~i~~~~l~~~i~~~~~-~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~-~~~ 343 (471)
....-.++++....+...- ..+..+|..+.+.|+..||+.++.++++.+.+++..+++++++.++++|++++..+ ..+
T Consensus 217 ~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s 296 (383)
T COG0075 217 RKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFADPERRS 296 (383)
T ss_pred CCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCC
Confidence 1111112344433322111 23345789999999999999999999999999999999999999999999997522 112
Q ss_pred eeEEEEccCCCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL 420 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~ 420 (471)
..+..-..|.++++.++. ..+++.||.+.++. ++.....+|||+ +. .....|+.....+|..++....
T Consensus 297 ~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~-----~~l~gkifRIGh--MG--~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 297 PTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQ-----GPLKGKIFRIGH--MG--NVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred CceEEEECCCCCCcHHHHHHHHHhCCEEecccc-----cccCccEEEEec--Cc--cCCHHHHHHHHHHHHHHHHHcC
Confidence 233333456788766654 46677799997764 334457899998 33 2568999999999999998754
No 19
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.96 E-value=6.5e-27 Score=238.46 Aligned_cols=358 Identities=16% Similarity=0.138 Sum_probs=239.0
Q ss_pred eeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 34 IELI-ASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 34 i~li-~s~n~~s~~v~~a~~~~l~~~~~~g~~~~-r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
+-|- ++...+|+.|++++...+...+ ++++. .+..+.+..+.+++ +++.+++++|++..+ ..+.+.++|+++.
T Consensus 18 iyld~a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~--~i~~t~g~t~~l~ 92 (398)
T TIGR03392 18 VYLDSAATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYEL-ARQQVARFLNAPDAE--NIVWTRGTTESIN 92 (398)
T ss_pred EEeeCccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHHH-HHHHHHHHhCCCCCC--eEEEeCChHHHHH
Confidence 4443 4556788999999988775443 34432 23333344445554 578899999985321 2344566678999
Q ss_pred HHHHHh----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 112 AAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 112 ~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
.++.++ ++|||+|++.+++|++.+.... ..+...| .+++.++++ .++.+|++++++++.+ ++++|++
T Consensus 93 ~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~-----~~~~~~g--~~v~~v~~~-~~~~~~~~~l~~~i~~-~t~lv~i 163 (398)
T TIGR03392 93 LVAQSYARPRLQPGDEIIVSEAEHHANLIPWL-----MVAQQTG--AKVVKLPIG-ADLLPDIRQLPELLTP-RTRILAL 163 (398)
T ss_pred HHHHHhhhccCCCCCEEEECCcchhHHHHHHH-----HHHHHcC--cEEEEEecC-CCCCcCHHHHHHHhcc-CceEEEE
Confidence 999887 5899999999988876421110 0112233 455566665 3467999999998864 7898875
Q ss_pred c--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC-
Q 012104 188 G--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK- 261 (471)
Q Consensus 188 ~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~- 261 (471)
. +|++|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||. .||.| |+++.++++.
T Consensus 164 ~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 164 GQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQALDIDFYAFSGHKL-YGPTGIGVLYGKTELLE 237 (398)
T ss_pred ECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CCChhhcCCCEEEEecccc-cCCCceEEEEEcHHHHh
Confidence 4 67899999999999999999999999999975532 22222 589999999995 57776 8888776531
Q ss_pred CCCC--CCCCCc-ccchHh-hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceE
Q 012104 262 PPKK--GQPEGA-VYDFED-KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (471)
Q Consensus 262 ~~~~--~~~~i~-~~~l~~-~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i 336 (471)
...+ ++.... ...... ...........|+|+...++++..|++.+.+.++++..++..+.++++.+.|.+. |+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~ 317 (398)
T TIGR03392 238 AMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRS 317 (398)
T ss_pred hCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 1111 110000 000000 0000001113478888889999989887655567777788888899999999887 8887
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--CCC-CCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--SAL-APGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~~-~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
... ..++++++.+. +++++++.+.|.++||.++.+..+... ..+ ..+++|+|+..+++ ++|++++.+.|.
T Consensus 318 ~~~-~~~~i~~~~~~--~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t----~~ei~~l~~~l~ 390 (398)
T TIGR03392 318 FRC-PGSSLLAFDFA--GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNT----QQDVDALVDAVG 390 (398)
T ss_pred eCC-CCCcEEEEEeC--CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCC----HHHHHHHHHHHH
Confidence 532 33455555543 567888988999999999876532210 000 13689999977765 899999999998
Q ss_pred HHHHH
Q 012104 414 RAVTL 418 (471)
Q Consensus 414 ~~l~~ 418 (471)
++++.
T Consensus 391 ~~~~~ 395 (398)
T TIGR03392 391 AALEL 395 (398)
T ss_pred HHHHH
Confidence 87653
No 20
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=7.6e-27 Score=237.67 Aligned_cols=348 Identities=16% Similarity=0.115 Sum_probs=241.3
Q ss_pred CeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 33 GIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 33 ~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
.+.+.|++..++++|++++...+.++. +.++.+.++ .+++++++++|++.++ +.+.+++|+.++.+
T Consensus 10 ~~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~~~~~~~~~-~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~ 75 (401)
T PLN02409 10 NHLFVPGPVNIPERVLRAMNRPNEDHR-----------SPAFPALTK-ELLEDVKYIFKTKSGT--PFIFPTTGTGAWES 75 (401)
T ss_pred ceeccCCCCCCCHHHHHHhcCCCCCCC-----------CHHHHHHHH-HHHHHHHHHhCCCCCC--EEEEeCCcHHHHHH
Confidence 356889999999999999965442221 123344444 4678899999997533 45778889999999
Q ss_pred HHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---CCCcEEEEc-
Q 012104 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKLIICG- 188 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~~pklIi~~- 188 (471)
++..+++|||+|++.++.|.+.. +. ..+...|. +++.++.+. ++.+|++++++.+.+ .++|+|++.
T Consensus 76 a~~~~~~~Gd~Vlv~~~~~~~~~---~~----~~~~~~g~--~v~~v~~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~ 145 (401)
T PLN02409 76 ALTNTLSPGDKVVSFRIGQFSLL---WI----DQMQRLNF--DVDVVESPW-GQGADLDILKSKLRQDTNHKIKAVCVVH 145 (401)
T ss_pred HHHhcCCCCCEEEEeCCCchhHH---HH----HHHHHcCC--ceEEEECCC-CCCCCHHHHHHHHhhCcCCCccEEEEEe
Confidence 99999999999999997665432 10 01122343 444455453 345899999999975 368988765
Q ss_pred -CCCCCccccHHHHHHH--HHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCC
Q 012104 189 -GSAYPRDWDYARFRAV--ADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (471)
Q Consensus 189 -~s~~g~~~d~~~i~~i--a~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~ 262 (471)
.|++|...|+++|.++ |+++|+++++|++|++|. .|..++ ++|++++|+||||.||.| |+++.+++..+
T Consensus 146 ~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~-----~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~ 220 (401)
T PLN02409 146 NETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGA-----LDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALE 220 (401)
T ss_pred ecccccccCCHHHHHHHHhhhccCcEEEEEcccccCC-----ccccccccCccEEEEcCccccCcCCCcceeEECHHHHH
Confidence 5689999999999999 999999999999997652 333343 689999999999988776 88888764211
Q ss_pred -CCCCCCCCcccchHhhhhhcCCC-CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC
Q 012104 263 -PKKGQPEGAVYDFEDKINFAVFP-SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (471)
Q Consensus 263 -~~~~~~~i~~~~l~~~i~~~~~~-~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~ 340 (471)
..+......++++....+..... ...++|+...+.++..|++.+.+.++++..++..++++++.+.|.+.|++++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~ 300 (401)
T PLN02409 221 ASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKK 300 (401)
T ss_pred HHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCC
Confidence 10000000001211111110000 1134788888899999999887777888889999999999999998899987532
Q ss_pred CC--C-eeEEEEccCCCCCHHHHHH-HHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 341 TE--N-HLVLWDLRPLGLTGNKVEK-LCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 341 ~~--~-~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.. + .++++.+ +.++++.++.+ ++++.||.+..+..+ .....||||+...+ +++|+.++..+|.+++
T Consensus 301 ~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~~~-----~~~~~~Rig~~g~~----~~~~~~~~~~~~~~~l 370 (401)
T PLN02409 301 PEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGLNK-----VAGKVFRIGHLGNV----NELQLLGALAGVEMVL 370 (401)
T ss_pred hhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCCCc-----ccCCEEEEcCCCCC----CHHHHHHHHHHHHHHH
Confidence 11 1 2334544 35778888754 457889999876432 23578999986544 4799999999999988
Q ss_pred HHH
Q 012104 417 TLT 419 (471)
Q Consensus 417 ~~~ 419 (471)
...
T Consensus 371 ~~~ 373 (401)
T PLN02409 371 KDV 373 (401)
T ss_pred HHc
Confidence 754
No 21
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=5.4e-27 Score=239.60 Aligned_cols=357 Identities=16% Similarity=0.114 Sum_probs=239.8
Q ss_pred eeE-ecCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhcCCC-CCCCceeeecCChHHHH
Q 012104 34 IEL-IASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 34 i~l-i~s~n~~s~~v~~a~~~~l~~~~~~g~~~~-r~~~g~~~~~~lE~~~~~~~~~lfg~~-~~~~~~~v~~~sGt~A~ 110 (471)
+-| .++...++++|++++...+...+. ++.. .+..+.+..+.+++ +++.+++++|+. .+ ..+.+.++|+++
T Consensus 25 iYld~a~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~---~v~~t~g~t~~l 98 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDAEAEFYRHGYA--AVHRGIHTLSAQATEKMEN-VRKQAALFINARSAE---ELVFVRGTTEGI 98 (406)
T ss_pred EEEeCcccccCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHH-HHHHHHHHcCcCCCC---eEEEeCCHHHHH
Confidence 444 355667889999999887765442 2221 22234455566665 578899999984 33 234455667888
Q ss_pred HHHHHH----hcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE
Q 012104 111 FAAYTA----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 111 ~~~~~a----ll~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi 186 (471)
..++.+ +++|||+|++.+++|++.+.-.. ......| .+++.++++ +++.+|++++++.+.+ ++++|+
T Consensus 99 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~ 169 (406)
T PRK09295 99 NLVANSWGNSNVRAGDNIIISEMEHHANIVPWQ-----MLCARVG--AELRVIPLN-PDGTLQLETLPALFDE-RTRLLA 169 (406)
T ss_pred HHHHHHhhhhcCCCcCEEEECcchhhHHHHHHH-----HHHHHcC--cEEEEEecC-CCCCCCHHHHHHhcCC-CcEEEE
Confidence 888876 46899999999988765321100 0011233 455555555 4578999999998864 789887
Q ss_pred Ec--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC
Q 012104 187 CG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK 261 (471)
Q Consensus 187 ~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~ 261 (471)
+. +|++|...|+++|.++|+++|+++++|++|+.|. .+.++. ++|++++|+|| +.||.| |+++.++++.
T Consensus 170 l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~-----~~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~~~ 243 (406)
T PRK09295 170 ITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMH-----HPVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEALL 243 (406)
T ss_pred EecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCc-----cccCchhcCCCEEEeehhh-ccCCCCcEEEEEchHhH
Confidence 55 6789999999999999999999999999997653 233343 68999999999 568887 8888877542
Q ss_pred -CCCC--CCCCC-cccchHhh--hhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012104 262 -PPKK--GQPEG-AVYDFEDK--INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (471)
Q Consensus 262 -~~~~--~~~~i-~~~~l~~~--i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~ 334 (471)
...+ .|... ....+... ..........|+|+...+++++.|++.+.+.++++..++....++++.+.|.+. |+
T Consensus 244 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~ 323 (406)
T PRK09295 244 QEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_pred hhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 1111 11110 00000000 000011123578899999999999988766577778888888899999999887 78
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
+++......+++.+.+ .+.+++++.+.|++.||.++.+...... ....++.+|+|++.+++ ++|++++.+.
T Consensus 324 ~~~~~~~~~~iv~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt----~~did~l~~~ 397 (406)
T PRK09295 324 TLYGPQNRLGVIAFNL--GKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNT----HEEVDRLVAG 397 (406)
T ss_pred EEeCCCCCceEEEEEE--CCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCCCC----HHHHHHHHHH
Confidence 8864322234444443 3467788888999999999876532211 00123579999987765 8999999999
Q ss_pred HHHHHH
Q 012104 412 LHRAVT 417 (471)
Q Consensus 412 i~~~l~ 417 (471)
|.++..
T Consensus 398 l~~i~~ 403 (406)
T PRK09295 398 LQRIHR 403 (406)
T ss_pred HHHHHH
Confidence 988643
No 22
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.6e-26 Score=232.76 Aligned_cols=345 Identities=13% Similarity=0.029 Sum_probs=230.3
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 32 RGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
+.+.|+|++..++++|++++..... .+ +.++.+.+++ +++.+++++|++.++. ..+.+.|||.|+.
T Consensus 3 ~~~l~~pgp~~~~~~v~~~~~~~~~-~~-----------~~~~~~~~~~-~r~~la~l~~~~~~~~-~i~~t~~~t~al~ 68 (363)
T TIGR02326 3 NYLLLTPGPLTTSRTVKEAMLFDWC-TW-----------DSDYNIVVEQ-IRQQLLALATAEEGYT-SVLLQGSGTFAVE 68 (363)
T ss_pred ceeEecCCCCCCCHHHHHHhCCCCC-CC-----------ChHHHHHHHH-HHHHHHHHhCCCCCce-EEEEcCCCHHHHH
Confidence 3456899999999999999865331 11 2356666664 6788999999975321 3456788899999
Q ss_pred HHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-CCcEEEE--c
Q 012104 112 AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIIC--G 188 (471)
Q Consensus 112 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-~pklIi~--~ 188 (471)
+++.+++.+||.+++..+.+.++.-. ..+...|. +++.++++ +++.+|++++++++... ++++|.+ .
T Consensus 69 ~~~~~l~~~~~~vlv~~~~~~~~~~~-------~~a~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~ 138 (363)
T TIGR02326 69 AVIGSAVPKDGKLLVVINGAYGARIV-------QIAEYLGI--PHHVVDTG-EVEPPDVVEVEAILAADPAITHIALVHC 138 (363)
T ss_pred HHHHhcCCCCCeEEEEeCChhhHHHH-------HHHHHcCC--ceEEEeCC-CCCCCCHHHHHHHHhhCCCccEEEEEee
Confidence 99999999999887766443322100 01122343 44444544 45789999999998753 3465543 3
Q ss_pred CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCC
Q 012104 189 GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPK 264 (471)
Q Consensus 189 ~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~ 264 (471)
.+++|...|+++|.++|+++|+++++|++|+.|. .|.++. ++|++++|+||||.||.| |+++++++.. ...
T Consensus 139 ~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~-----~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~ 213 (363)
T TIGR02326 139 ETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGG-----IPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACK 213 (363)
T ss_pred cCCccccCcHHHHHHHHHHcCCEEEEEccccccC-----cccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhh
Confidence 7889999999999999999999999999987552 233343 689999999999988877 9998876421 110
Q ss_pred CCCCCCcccchHhhhhhcC-CCC-CCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCCceEeeCC-
Q 012104 265 KGQPEGAVYDFEDKINFAV-FPS-LQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGYSLVTGG- 340 (471)
Q Consensus 265 ~~~~~i~~~~l~~~i~~~~-~~~-~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~- 340 (471)
...... +.++........ .++ ...++....+.++..|++.+... ++++..+++.++++++.+.|++.|+.++...
T Consensus 214 ~~~~~~-~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~ 292 (363)
T TIGR02326 214 GNARSL-SLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDE 292 (363)
T ss_pred cCCCce-eecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcc
Confidence 000000 001110000000 011 11245566777887888776554 3677888899999999999998999876432
Q ss_pred CCC-eeEEEEccCC-CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 341 TEN-HLVLWDLRPL-GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 341 ~~~-~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
..+ ...++.+.+. .++..++.+.|+++||.+.++..+ ...+||||+.... +.+|++++.+.|.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~------~~~~iRi~~~~~~----~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 293 IQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS------QVDCFRIGNIGEV----DAADITRLLTAIGKAM 360 (363)
T ss_pred cCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC------CCCEEEEecCCCC----CHHHHHHHHHHHHHHh
Confidence 122 2345555432 256778888899999999876432 2368999974332 4799999999998875
No 23
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=9.8e-27 Score=236.76 Aligned_cols=332 Identities=18% Similarity=0.190 Sum_probs=226.2
Q ss_pred CCeeEecCCCC----CcHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASENF----TSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n~----~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
+.|++..+ +| .+|++++++...+.. |..||++.|+..|. +...++| +.+++++|.+. + +.++||
T Consensus 39 ~~i~~~~~-~~lg~~~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~----~-ii~~~~ 107 (393)
T TIGR01822 39 EVLNFCAN-NYLGLSSHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED----T-ILYASC 107 (393)
T ss_pred eEEEeeCC-CccccCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc----E-EEECch
Confidence 34666544 44 278999998877744 44588888887774 4444555 67889999864 3 556788
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---C--C
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---F--R 181 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~--~ 181 (471)
++|+.+++.++++|||+|++.++.|.++.. .+...+. ..+.+ ..+|++++++.+.+ . +
T Consensus 108 ~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~---------~~~~~~~--~~~~~------~~~d~~~l~~~i~~~~~~~~~ 170 (393)
T TIGR01822 108 FDANGGLFETLLGAEDAIISDALNHASIID---------GVRLCKA--KRYRY------ANNDMADLEAQLKEARAAGAR 170 (393)
T ss_pred HHHHHHHHHHhCCCCCEEEEeccccHHHHH---------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhhhcCCC
Confidence 999999999999999999999988876542 1112221 11222 25899999998874 2 6
Q ss_pred CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-ccC---CCCC-CCccEEEeCCCCcCCCCCeEEE
Q 012104 182 PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QEA---ANPF-EYCHIVTTTTHKSLRGPRAGMI 254 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~~---~~p~-~~aDiv~~s~~K~l~GprgG~i 254 (471)
+++|+++ .|++|...|+++|+++|+++|++|++|++|..|.... +.. ...+ +.+|++++|+||+++|+|+|++
T Consensus 171 ~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~ 250 (393)
T TIGR01822 171 HRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFT 250 (393)
T ss_pred ceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEE
Confidence 7777765 5889999999999999999999999999997775432 110 0111 2578999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
++++ ++.+.+.....+. ..+++....+++...+++... +.++..+++.++.+++.+.|++.|
T Consensus 251 ~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~g 313 (393)
T TIGR01822 251 TARK---------------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAAG 313 (393)
T ss_pred EeCH---------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcC
Confidence 8876 4555444322222 223344444455555665432 345677788889999999998888
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
+.+.. + ...++.+.+.+ ..+..++.+.|.+.||.+.....|. .+.....+|++++..+ +++|++++.+.|.
T Consensus 314 ~~~~~-~-~~~~~~i~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~--~~~~~~~iRis~~~~~----t~edi~~~~~~l~ 384 (393)
T TIGR01822 314 FDIKP-A-DHPIIPVMLYD-AVLAQRFARRLLEEGIYVTGFFYPV--VPKGQARIRVQISAAH----TEEQLDRAVEAFT 384 (393)
T ss_pred CCCCC-C-CCCEEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHH
Confidence 87642 2 22334443322 2345678777878899997432221 1122357999886654 4899999999998
Q ss_pred HHHH
Q 012104 414 RAVT 417 (471)
Q Consensus 414 ~~l~ 417 (471)
++.+
T Consensus 385 ~~~~ 388 (393)
T TIGR01822 385 RIGR 388 (393)
T ss_pred HHHH
Confidence 8765
No 24
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=2.7e-26 Score=234.34 Aligned_cols=358 Identities=15% Similarity=0.128 Sum_probs=236.7
Q ss_pred eeE-ecCCCCCcHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 34 IEL-IASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 34 i~l-i~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r-~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
+-| .++...+|+.|++++...+...+ +.|..+ ++.+.+..+.++ .+++.+++++|++... ..+.+.++++++.
T Consensus 20 ~yld~~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~ 94 (403)
T TIGR01979 20 VYLDSAATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE--EIVFTRGTTESIN 94 (403)
T ss_pred EEEeCccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC--eEEEeCCHHHHHH
Confidence 444 34556789999999987776554 333321 222233344455 3578899999998321 2344556667888
Q ss_pred HHHHHh----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 112 AAYTAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 112 ~~~~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
.++.++ ++|||+|++.+++|+++..... ......|. +++.++++ +++.+|++++++.+. .+|++|++
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~~~~~l~~~i~-~~~~lv~~ 165 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQ-----LLAERTGA--TLKFIPLD-DDGTLDLDDLEKLLT-EKTKLVAI 165 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHH-----HHHHhcCc--EEEEEecC-CCCCCCHHHHHHHhc-cCCeEEEE
Confidence 887764 6899999999988876432110 01112343 44455556 568899999999886 47898875
Q ss_pred c--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCC
Q 012104 188 G--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (471)
Q Consensus 188 ~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~ 262 (471)
. +|++|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||.| |+++.++++..
T Consensus 166 ~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~~~~ 239 (403)
T TIGR01979 166 THVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEELLE 239 (403)
T ss_pred EcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCcc-----ccCccccCCCEEEEeccccc-CCCCceEEEEchHHHh
Confidence 4 67899999999999999999999999999976632 22222 6899999999975 7877 88888765311
Q ss_pred -CC---CCCCCCcccchHh-hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceE
Q 012104 263 -PK---KGQPEGAVYDFED-KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL 336 (471)
Q Consensus 263 -~~---~~~~~i~~~~l~~-~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i 336 (471)
.. .++.....+.... ...........|+|+...+++++.+++.+...++++..++..+.++.+.+.|++. |+++
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~ 319 (403)
T TIGR01979 240 QMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRI 319 (403)
T ss_pred cCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 11 1111111000000 0000001112467888888888888887655467788888899999999999887 8888
Q ss_pred eeCCC---CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcCCCHHHHHHHHH
Q 012104 337 VTGGT---ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRGLLEKDFEQIGE 410 (471)
Q Consensus 337 ~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g~~~~d~~~l~~ 410 (471)
+.+.. ..+++.+.+. ++++.++.+.|+++||.++.+..+..+ ....++.+||+++.+++ ++|++++++
T Consensus 320 ~~~~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t----~~di~~l~~ 393 (403)
T TIGR01979 320 YGPRDAEDRGGIISFNVE--GVHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYIYNT----EEDIDALVE 393 (403)
T ss_pred eCCCCccccCceEEEEeC--CcCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEeccCCC----HHHHHHHHH
Confidence 64321 1445555553 456778889999999999875321100 00014689999977764 799999999
Q ss_pred HHHHHHH
Q 012104 411 FLHRAVT 417 (471)
Q Consensus 411 ~i~~~l~ 417 (471)
+|.++++
T Consensus 394 ~l~~~~~ 400 (403)
T TIGR01979 394 ALKKVRK 400 (403)
T ss_pred HHHHHHH
Confidence 9988665
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.96 E-value=1.1e-26 Score=234.85 Aligned_cols=350 Identities=16% Similarity=0.140 Sum_probs=233.6
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRY-YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~-~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
.+...+|+.+++++...+...+ ++|++.. ..+....+.++ .+++++++++|++... ..+.++|++.|+..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYE-AAREKVARFINAPSPD--EIIFTRNTTEAINLVAYG 80 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCCCCCC--eEEEeCCHHHHHHHHHHH
Confidence 4667789999999988875543 3443321 22233344444 3568899999987321 234466777899999999
Q ss_pred hcC---CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCC
Q 012104 117 VLE---PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSA 191 (471)
Q Consensus 117 ll~---pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~ 191 (471)
+.. |||+|++.+++|++++.... ......|. +++.++++ +++.+|++++++.+.+ ++++|++. +|+
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~ 151 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQ-----QLAERTGA--KLKVVPVD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNV 151 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHH-----HHHhhcCc--EEEEeecC-CCCCcCHHHHHHHhcC-CceEEEEeCcccc
Confidence 877 99999999988876532110 00112343 44445555 5678999999999875 78888754 678
Q ss_pred CCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCeEEEEeeCCCCC-CCC---
Q 012104 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKGPKP-PKK--- 265 (471)
Q Consensus 192 ~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~GprgG~i~~~~~~~~-~~~--- 265 (471)
+|...|+++|.++|+++|++|++|++|+.|.. +.++. ++|++++|+||++.++++|++++++++.. ..+
T Consensus 152 tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~ 226 (373)
T cd06453 152 LGTINPVKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGG 226 (373)
T ss_pred cCCcCCHHHHHHHHHHcCCEEEEEhhhhcCce-----eeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeec
Confidence 99999999999999999999999999976532 22332 68999999999987777799988765321 111
Q ss_pred CCCCCcccch-HhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCC-CC
Q 012104 266 GQPEGAVYDF-EDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG-TE 342 (471)
Q Consensus 266 ~~~~i~~~~l-~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~-~~ 342 (471)
++.......+ .............++|+...+.++..+++.+...++++..++..++++++.+.|++. |++++... ..
T Consensus 227 g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 306 (373)
T cd06453 227 GGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDR 306 (373)
T ss_pred CCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCcccc
Confidence 1111100000 000000001112356777778888888887766677788888889999999999887 78886322 23
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
.+++++.+. +++..++.+.|.++||.+..+..+..+ ....++.||++++.+++ ++|+++++++|
T Consensus 307 ~~~~~~~~~--~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t----~~di~~~~~~l 373 (373)
T cd06453 307 AGVVSFNLE--GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT----EEEIDALVEAL 373 (373)
T ss_pred CCeEEEEEC--CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC----HHHHHHHHhhC
Confidence 445666653 457788989999999999765422110 00124689999976655 79999998764
No 26
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.96 E-value=2.3e-26 Score=232.88 Aligned_cols=341 Identities=18% Similarity=0.203 Sum_probs=233.6
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al 117 (471)
++...++++|++++...+... .|+|+..+..+.++.+.++ .+++++++++|++.+ ..+.+.+||+++.+++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPD---EIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCcHHHHHHHHHHHH
Confidence 455678899999998887653 3666543222334455555 467889999999864 2355667889999888876
Q ss_pred c---CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCC
Q 012104 118 L---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAY 192 (471)
Q Consensus 118 l---~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~ 192 (471)
+ .+||+|++.+.+|++..... ..+...| .+++.++++ +++.+|++++++.+.+ +++++++. +|++
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~~------~~~~~~G--~~v~~v~~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~t 149 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSLC------QHLEKQG--YKVTYLPVD-EEGRLDLEELRAAITD-DTALVSVMWANNET 149 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHHH------HHHHHcC--CEEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCe
Confidence 4 56789998887776543211 0111123 345555555 4578999999999864 78877654 6789
Q ss_pred CccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCC
Q 012104 193 PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPE 269 (471)
Q Consensus 193 g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~ 269 (471)
|..+|+++|.++|+++|+++++|++|+.|. .|.++. ++|++++|+|| +.||.| |+++.++... ..+ .
T Consensus 150 G~~~~~~~I~~l~~~~g~~vivD~~~~~g~-----~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~-~~p---~ 219 (379)
T TIGR03402 150 GTIFPIEEIGEIAKERGALFHTDAVQAVGK-----IPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR-FRP---L 219 (379)
T ss_pred eecccHHHHHHHHHHcCCEEEEECcccccc-----cccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC-CCC---c
Confidence 999999999999999999999999998653 333343 78999999999 779987 8887776421 000 0
Q ss_pred CcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc-C-CceEeeCCCC--Cee
Q 012104 270 GAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG-K-GYSLVTGGTE--NHL 345 (471)
Q Consensus 270 i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~-~-g~~i~~~~~~--~~~ 345 (471)
+ ....... ....|+++...+.++..+++.... ++++..++..++++++.+.|.+ . ++.+...... ...
T Consensus 220 ~----~g~~~~~---~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 291 (379)
T TIGR03402 220 L----RGGHQER---GRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNT 291 (379)
T ss_pred c----cCCccCC---CcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCE
Confidence 0 0000001 112467888889999888887643 6677777888888899999875 4 7777542221 123
Q ss_pred EEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--C------------CCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 346 VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--S------------ALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 346 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~------------~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
+.+.+ .++++.++...|+++||.++.+..+... . ....+.+|+|++..++ ++|++++.+.
T Consensus 292 ~~~~~--~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t----~~di~~~~~~ 365 (379)
T TIGR03402 292 VNISF--EYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNT----EEDIDYVLEV 365 (379)
T ss_pred EEEEe--cCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCC----HHHHHHHHHH
Confidence 33333 2467888988999999999876532211 0 1124789999987766 7999999999
Q ss_pred HHHHHHH
Q 012104 412 LHRAVTL 418 (471)
Q Consensus 412 i~~~l~~ 418 (471)
|++++..
T Consensus 366 l~~~~~~ 372 (379)
T TIGR03402 366 LPPIIAR 372 (379)
T ss_pred HHHHHHH
Confidence 9987754
No 27
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.8e-26 Score=236.99 Aligned_cols=356 Identities=12% Similarity=0.072 Sum_probs=238.3
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~-r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
++....++.|++++...+...+. .+.. .++.+.+..+.+++ +++.+++++|++... ..+.+.++|+++..++.+
T Consensus 39 a~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~--~v~~t~g~t~al~~i~~~ 113 (424)
T PLN02855 39 AATSQKPAAVLDALQDYYEEYNS--NVHRGIHALSAKATDAYEL-ARKKVAAFINASTSR--EIVFTRNATEAINLVAYT 113 (424)
T ss_pred ccccCCCHHHHHHHHHHHHhcCC--CCCCccchHHHHHHHHHHH-HHHHHHHHcCCCCCC--EEEEeCCHHHHHHHHHHH
Confidence 45566789999999877754432 2222 23333344455554 578899999995321 234456667888888876
Q ss_pred ----hcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CC
Q 012104 117 ----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GS 190 (471)
Q Consensus 117 ----ll~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s 190 (471)
.++|||+|++.+++|++.+.. +. ......| .+++.+++++ ++.+|++++++.+.. ++++|++. +|
T Consensus 114 ~~~~~~~~gd~vl~~~~~~~s~~~~-~~----~~a~~~g--~~v~~v~~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~~n 184 (424)
T PLN02855 114 WGLANLKPGDEVILSVAEHHSNIVP-WQ----LVAQKTG--AVLKFVGLTP-DEVLDVEQLKELLSE-KTKLVATHHVSN 184 (424)
T ss_pred hhhhcCCCcCEEEECCCccHHHHHH-HH----HHHHHcC--CEEEEEecCC-CCCcCHHHHHHHhcc-CceEEEEeCccc
Confidence 468999999999888754321 10 0011234 3455555553 356999999999864 78988765 67
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCC-CC--
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PK-- 264 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~-~~-- 264 (471)
++|..+|+++|.++|+++|+++++|++|..|. .+.++. ++|++++|+|| +.||.| |+++.++++.. ..
T Consensus 185 ~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~-----~~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~~~~~~~p~ 258 (424)
T PLN02855 185 VLGSILPVEDIVHWAHAVGAKVLVDACQSVPH-----MPVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSDLLESMPPF 258 (424)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEhhhhcCC-----cCCCchhcCCCEEEeeccc-ccCCCccEEEEEchhhhhcCCCE
Confidence 89999999999999999999999999997653 222333 58999999999 568876 88888765321 11
Q ss_pred -CCCCCCcc-cchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC
Q 012104 265 -KGQPEGAV-YDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT 341 (471)
Q Consensus 265 -~~~~~i~~-~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~ 341 (471)
.++..... +...............|+|+...+++++.+++.+...++++..++..+.++.+.+.|++. |++++....
T Consensus 259 ~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~ 338 (424)
T PLN02855 259 LGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKP 338 (424)
T ss_pred ecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCc
Confidence 11111110 000000000000123578899999999999987766677888888899999999999887 888874321
Q ss_pred -----CCeeEEEEccCCCCCHHHHHHHHhhc-CeEeccCCcCCCC--CC-CCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 342 -----ENHLVLWDLRPLGLTGNKVEKLCDLC-NITVNKNAVFGDS--SA-LAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 342 -----~~~~~~v~~~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~--~~-~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
...++.+.+ .+++++++.+.|.+. ||.++.+.....+ .. -..+.+|+|++.+++ ++|++++++.|
T Consensus 339 ~~~~~r~~~v~~~~--~~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt----~~di~~l~~~l 412 (424)
T PLN02855 339 SEGVGRAALCAFNV--EGIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNT----KEEVDAFIHAL 412 (424)
T ss_pred ccccCcccEEEEEE--CCcCHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCC----HHHHHHHHHHH
Confidence 123444444 356788898888777 9999876432110 00 013679999988776 79999999999
Q ss_pred HHHHHHH
Q 012104 413 HRAVTLT 419 (471)
Q Consensus 413 ~~~l~~~ 419 (471)
++++...
T Consensus 413 ~~~~~~~ 419 (424)
T PLN02855 413 KDTIAFF 419 (424)
T ss_pred HHHHHHH
Confidence 9987653
No 28
>PLN00175 aminotransferase family protein; Provisional
Probab=99.96 E-value=7.6e-26 Score=231.12 Aligned_cols=361 Identities=14% Similarity=0.079 Sum_probs=233.5
Q ss_pred ccccccChHHHHHHHHHHHhccCCeeEecCCC-C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 012104 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASEN-F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRAL 87 (471)
Q Consensus 10 ~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n-~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~ 87 (471)
+.+....++.+..+.... .+.+.|+|..+.. + .++.+.+++...+.... ..|+. ......+++...+++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 34 KRLEKFKTTIFTQMSSLA-IKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGK-NQYAR------GFGVPELNSAIAERFK 105 (413)
T ss_pred HHhhcCCCCHHHHHHHHh-hcCCeEecCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCCCHHHHHHHHHHHH
Confidence 334455555555444332 3346788876653 2 36788888877664321 12322 2223345544556666
Q ss_pred HhcCCCCCCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC
Q 012104 88 QTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (471)
Q Consensus 88 ~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~ 166 (471)
+.+|.+.+.- .+|..++| ++|+..++.++++|||+|++.+|.|+.+.. .+...| .+++.++++++++
T Consensus 106 ~~~g~~~~~~-~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~ 173 (413)
T PLN00175 106 KDTGLVVDPE-KEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA---------TLSMAG--AKIKTVTLRPPDF 173 (413)
T ss_pred HHhCCCCCCC-CCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH---------HHHHcC--CEEEEEECCcccC
Confidence 6667543210 12444555 579999999999999999999999877642 122344 3555666665568
Q ss_pred CCCHHHHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCC--CCC---cc
Q 012104 167 YIDYDKLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--FEY---CH 236 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p--~~~---aD 236 (471)
.+|+++|++.+.. ++|+|+++ +||+|.+++ +++|.++|+++|++|++|++|. .+.+.+...+. +.. -.
T Consensus 174 ~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~s~~~~~~~~~~v 251 (413)
T PLN00175 174 AVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYD-KLAFEGDHISMASLPGMYERT 251 (413)
T ss_pred CCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccC-ccccCCcccChhhCCCCcCcE
Confidence 8999999998864 68888754 789999986 4567788999999999999997 66554432221 222 23
Q ss_pred EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 237 IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 237 iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
|++.|++|+ ++|.|.||+++++ ++.+.+.........+.+...+. +.+.++... ...+++.
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~---------------~l~~~l~~~~~~~~~~~s~~~Q~-a~~~~l~~~-~~~~~~~ 314 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPP---------------HLTWGVRQAHSFLTFATATPMQW-AAVAALRAP-ESYYEEL 314 (413)
T ss_pred EEEecchhhccCcchheeeeEeCH---------------HHHHHHHHHHhhccCCCCHHHHH-HHHHHHhCC-HHHHHHH
Confidence 888999999 4789999999987 44444433221111223333333 334455432 2345777
Q ss_pred HHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCC-CHHHHHH-HHhhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 315 AKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGL-TGNKVEK-LCDLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~-~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
.+++.++++.+.+.|++.|+.+. .+.+++++|+++.+.++ +..++.+ +++++||.+.++..++..+....+++||++
T Consensus 315 ~~~~~~~~~~l~~~L~~~g~~~~-~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~ 393 (413)
T PLN00175 315 KRDYSAKKDILVEGLKEVGFKVY-PSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF 393 (413)
T ss_pred HHHHHHHHHHHHHHHHHCCCeec-CCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE
Confidence 88888899999999998898874 45667889998865454 4566654 557889999988765422112346899998
Q ss_pred CCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 393 PAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 393 ~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
. . .++++++..+.|.+.+
T Consensus 394 ~--~----~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 394 C--K----DEETLRAAVERMKTKL 411 (413)
T ss_pred c--C----CHHHHHHHHHHHHHHH
Confidence 3 2 2677777777776654
No 29
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=3.3e-26 Score=231.12 Aligned_cols=346 Identities=20% Similarity=0.219 Sum_probs=234.7
Q ss_pred ecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 37 IASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 37 i~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
.++...+|+.|++++...+.+.+..+..+ .+..+.++.+.++ .+++.+++++|++.++ ..+.+.|+|.|+..++.+
T Consensus 5 ~~~~~~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 5 NAGTGPMPKSVLEAISDYLRNFYANPHSG-VSHRSREFAEILE-EAREALAKLLGAPPDE--EVVFTSNGTEALNAVASS 80 (371)
T ss_dssp TSSS-B-BHHHHHHHHHHHHHSGSSTSTS-SSTTSHHHHHHHH-HHHHHHHHHHTSSTTE--EEEEESSHHHHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHHhhhcCccc-ccchhhhhhHHHH-HHHHHHHHhcCCcccc--ccccccccchhhhhhhhc
Confidence 35677889999999998887776543222 2223445555665 4789999999998721 235567778899999999
Q ss_pred h---cCCCCEEEEeCCCCCCcccccccccCCccc-eeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CC
Q 012104 117 V---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKI-SATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GS 190 (471)
Q Consensus 117 l---l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~-~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s 190 (471)
+ +++||+|++.+..|++... .. ..+ ...| .++..++.+ .++.+|++++++.+. .++++|++. .+
T Consensus 81 l~~~~~~g~~vl~~~~~~~s~~~---~~---~~~~~~~g--~~v~~i~~~-~~~~~~~~~~~~~l~-~~~~lv~~~~~~~ 150 (371)
T PF00266_consen 81 LLNPLKPGDEVLVTSNEHPSNRY---PW---EEIAKRKG--AEVRVIPAD-PGGSLDLEDLEEALN-PDTRLVSISHVEN 150 (371)
T ss_dssp HHHHGTTTCEEEEEESSHHHHHH---HH---HHHHHHTT--EEEEEEEEG-TTSSCSHHHHHHHHH-TTESEEEEESBET
T ss_pred ccccccccccccccccccccccc---cc---ccccccch--hhhcccccc-ccchhhhhhhhhhhc-cccceEEeecccc
Confidence 9 8999999999977665431 00 011 1234 344455555 457899999999997 689999766 46
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCC----CCC
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGP----KPP 263 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~----~~~ 263 (471)
.+|...|+++|.++|+++|+++++|.+|++|. .+.+++ ++|++++|+|| |.||+| |+++.+++. ++.
T Consensus 151 ~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~-----~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~ 224 (371)
T PF00266_consen 151 STGVRNPIEEIAKLAHEYGALLVVDAAQSAGC-----VPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPA 224 (371)
T ss_dssp TTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTT-----SS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTS
T ss_pred cccEEeeeceehhhhhccCCceeEechhcccc-----ccccccccccceeeecccc-cCCCCchhhheehhhhhhccccc
Confidence 78999999999999999999999999998774 344444 78999999999 999997 888888742 111
Q ss_pred CCCCCCCcccchHhh-hhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC-ceEeeC--
Q 012104 264 KKGQPEGAVYDFEDK-INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG-YSLVTG-- 339 (471)
Q Consensus 264 ~~~~~~i~~~~l~~~-i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~~i~~~-- 339 (471)
..++.......+... ..........|+|+...+.++..+++.+...++++..++..++++++.+.|.+.+ +.++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 304 (371)
T PF00266_consen 225 KPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDD 304 (371)
T ss_dssp SSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSC
T ss_pred cccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecc
Confidence 112211110011000 1111122235788999999999999988666788889999999999999999985 455331
Q ss_pred -CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 340 -GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 340 -~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
...+.++.+.+ .+.++.++.+.|++.||.+..+.....+ .....+++|+|+..+++ ++|++++
T Consensus 305 ~~~~~~i~~~~~--~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt----~~dv~~l 371 (371)
T PF00266_consen 305 EPRRPSIVSFNL--PGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNT----EEDVDRL 371 (371)
T ss_dssp GGBGTTEEEEEE--TTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSS----HHHHHHH
T ss_pred cccccceEEEee--cCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCC----HHHHhhC
Confidence 12233555555 4678899999999999999875322100 00013799999988776 7899875
No 30
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=5.5e-26 Score=229.89 Aligned_cols=346 Identities=18% Similarity=0.187 Sum_probs=228.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r-~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pG 121 (471)
.|+.|++++.+.+.+.. +.++.. |..+......++ .+++++++++|++... ..+.+.|+++++..++.+++++|
T Consensus 12 ~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~la~~~~~~~~~--~v~~~~g~t~al~~~~~~~~~~g 86 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYG--GSPGRGRYRLALRASREVE-ETRQLLAKLFNAPSSA--HVVFTNNATTALNIALKGLLKEG 86 (376)
T ss_pred CCHHHHHHHHHHHHhcC--CCCCcccchHHHHHHHHHH-HHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHhccCCC
Confidence 57899999887765432 122211 111111223333 3467899999986531 12445577889999999999999
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHH
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYA 199 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~ 199 (471)
|+|++.++.|+++..... ......| .+++.++++ .++.+|++++++.+. .++++|++. +|++|...|++
T Consensus 87 d~vl~~~~~~~~~~~~~~-----~~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~ 157 (376)
T TIGR01977 87 DHVITTPMEHNSVARPLE-----CLKEQIG--VEITIVKCD-NEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIE 157 (376)
T ss_pred CEEEECcchhhHHHHHHH-----HHHHHcC--cEEEEEecC-CCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHH
Confidence 999999887765431000 0001123 355555555 457899999999986 478888754 67899999999
Q ss_pred HHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCC--CCCCCCCCCCcccc
Q 012104 200 RFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGP--KPPKKGQPEGAVYD 274 (471)
Q Consensus 200 ~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~--~~~~~~~~~i~~~~ 274 (471)
+|.++|+++|+++++|++|++|.. +..+. ++|++++|+|||+.||.| |+++.++.. .+...++.......
T Consensus 158 ~i~~l~~~~~~~livD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 232 (376)
T TIGR01977 158 EIGELAQENGIFFILDAAQTAGVI-----PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSAL 232 (376)
T ss_pred HHHHHHHHcCCEEEEEhhhccCcc-----CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccccc
Confidence 999999999999999999987753 22232 799999999999999987 666555542 12111211111000
Q ss_pred hHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCC-C--CCeeEEEEc
Q 012104 275 FEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG-T--ENHLVLWDL 350 (471)
Q Consensus 275 l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~-~--~~~~~~v~~ 350 (471)
+ ............|+++...++++..+++.+.+.+.+...++..++++++.+.|.+. |++++... . ...++++.+
T Consensus 233 ~-~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~ 311 (376)
T TIGR01977 233 I-DQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTV 311 (376)
T ss_pred c-cccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEE
Confidence 0 00000000112467788888899889988877677888889999999999999865 78876421 1 133455554
Q ss_pred cCCCCCHHHHHHHHhhc-CeEeccCCcCCCC-----CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 351 RPLGLTGNKVEKLCDLC-NITVNKNAVFGDS-----SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 351 ~~~~~~~~~~~~~L~~~-gI~v~~~~~p~~~-----~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.++++.++.+.|.+. ||.+..+...... ++...+.||+++...+ +++|++++.+.|.+
T Consensus 312 --~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~----t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 312 --EGIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFN----TEEEIEKLLEALSE 375 (376)
T ss_pred --CCCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCC----CHHHHHHHHHHHhh
Confidence 356888898888876 9999876422110 1223578999986654 48999999999864
No 31
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=7.1e-26 Score=231.39 Aligned_cols=328 Identities=16% Similarity=0.207 Sum_probs=226.2
Q ss_pred ecCCCCC----cHHHHHHHhhhhhccCCCCCC-CCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 37 IASENFT----SFAVIEALGSALTNKYSEGMP-GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 37 i~s~n~~----s~~v~~a~~~~l~~~~~~g~~-~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
..|.+|+ .|+|++++...+... ..+.. +..+..|.+....+| +++++++|.+. + +.++||+.||.
T Consensus 59 ~~~~~YL~l~~~p~v~~a~~~~~~~~-~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~----~-~~~~sG~~An~ 128 (407)
T PRK07179 59 LQSNDYLNLSGHPDIIKAQIAALQEE-GDSLVMSAVFLHDDSPKPQFE----KKLAAFTGFES----C-LLCQSGWAANV 128 (407)
T ss_pred eecCCccCCCCCHHHHHHHHHHHHHh-CCCCCccccccCCchHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHH
Confidence 3567776 589999998877543 22221 334555556666676 57888999875 3 66889999999
Q ss_pred HHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--C
Q 012104 112 AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--G 189 (471)
Q Consensus 112 ~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~ 189 (471)
+++.++..+||.|++..+.|.+... .+...| .+++++ ...|++++++++++.++++|++. +
T Consensus 129 ~~l~~l~~~g~~v~~~~~~h~s~~~---------~~~~~g--~~~~~~------~~~d~~~l~~~l~~~~~~lV~v~~v~ 191 (407)
T PRK07179 129 GLLQTIADPNTPVYIDFFAHMSLWE---------GVRAAG--AQAHPF------RHNDVDHLRRQIERHGPGIIVVDSVY 191 (407)
T ss_pred HHHHHhCCCCCEEEEECCcCHHHHH---------HHHHCC--CeEEEe------cCCCHHHHHHHHHhcCCeEEEECCCC
Confidence 9999999999999987766543321 111223 233333 24699999999875567877765 6
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc--C-CCCCC-CccEEEeCCCCcCCCCCeEEEEeeCCCCCCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE--A-ANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPK 264 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~--~-~~p~~-~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~ 264 (471)
|++|...|+++|+++|+++|++|++|++|..|.... |. . ..++. .+|++++|+||++ |+++|++++++
T Consensus 192 n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~-g~~~G~l~~~~------ 264 (407)
T PRK07179 192 STTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAF-AGRAGIITCPR------ 264 (407)
T ss_pred CCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhh-hccCeEEEeCH------
Confidence 789999999999999999999999999998664321 11 1 11122 4699999999998 46799999876
Q ss_pred CCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCC
Q 012104 265 KGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTEN 343 (471)
Q Consensus 265 ~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~ 343 (471)
++.+.+.....+.. .+++..+.++++..+++... ...+..+++.+++++|.+.|++.|+++. + .+
T Consensus 265 ---------~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~~l~~~L~~~g~~v~-~--~~ 330 (407)
T PRK07179 265 ---------ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIE--SADDRRARLHANARFLREGLSELGYNIR-S--ES 330 (407)
T ss_pred ---------HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCCCCC-C--CC
Confidence 44444443333332 34455666666666676543 2345678889999999999998888775 2 24
Q ss_pred eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
+++++.+.. ..+...+.+.|.++||.++.-..|. .+...+.+||+++..+ +++|++++.++|.+++...
T Consensus 331 ~i~~l~~~~-~~~~~~~~~~L~~~GI~~~~~~~p~--~~~~~~~lRis~~~~~----t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 331 QIIALETGS-ERNTEVLRDALEERNVFGAVFCAPA--TPKNRNLIRLSLNADL----TASDLDRVLEVCREARDEV 399 (407)
T ss_pred CEEEEEeCC-HHHHHHHHHHHHHCCceEeeecCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHHHHHHhh
Confidence 566665532 1234567788899999854322222 1223578999986654 4899999999999887653
No 32
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=5.9e-26 Score=231.34 Aligned_cols=343 Identities=17% Similarity=0.171 Sum_probs=222.5
Q ss_pred ecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 37 IASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 37 i~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
.++...+|+.+++++...+...+. .++..|.....+.+.++ .+++.+++++|++.++ .+.+.+++.++..++.+
T Consensus 23 ~~~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~l~~~ia~~~~~~~~~---v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 23 NPAGTQIPQSVADAVSAALTRSNA--NRGGAYESSRRADQVVD-DAREAVADLLNADPPE---VVFGANATSLTFLLSRA 96 (397)
T ss_pred CCccCCCCHHHHHHHHHHHHhcCC--CCCCCchHHHHHHHHHH-HHHHHHHHHcCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 466777899999999887754321 22221211111222333 4567899999987642 23345566777766666
Q ss_pred h---cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCC
Q 012104 117 V---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSA 191 (471)
Q Consensus 117 l---l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~ 191 (471)
+ ++|||+|++.++.|.+++.. +. ..+...| .+++.++++++++.+|++++++.+.+ ++++|++. +|+
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~-~~----~~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~ 168 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISP-WL----QAAERAG--AKVKWARVDEATGELHPDDLASLLSP-RTRLVAVTAASNT 168 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHH-HH----HHHHhcC--CEEEEEeccccCCCcCHHHHHHhcCC-CceEEEEeCCCCC
Confidence 4 78999999999887765321 10 0112234 34455555654688999999999864 68877753 688
Q ss_pred CCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCeEEEEeeCCCCC-CCCCCC
Q 012104 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKGPKP-PKKGQP 268 (471)
Q Consensus 192 ~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~GprgG~i~~~~~~~~-~~~~~~ 268 (471)
+|...|+++|.++|+++|+++++|++|..|. .+..+. ++|++++|+||++ ||+.|+++++++... ..+...
T Consensus 169 tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~-----~~~~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~~~~~~l~~~~~ 242 (397)
T TIGR01976 169 LGSIVDLAAITELVHAAGALVVVDAVHYAPH-----GLIDVQATGADFLTCSAYKFF-GPHMGILWGRPELLMNLPPYKL 242 (397)
T ss_pred CCccCCHHHHHHHHHHcCCEEEEehhhhccc-----cCCCHHHcCCCEEEEechhhc-CCceEEEEEcHHHHhhCCCccc
Confidence 9999999999999999999999999996542 222232 6899999999997 888999988874211 100000
Q ss_pred CCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH--------------HHHHHHHHHHHHHHHHHHHHcCC-
Q 012104 269 EGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA--------------FKAYAKQVKANAVALGNYLTGKG- 333 (471)
Q Consensus 269 ~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~--------------~~~~~~~~~~na~~l~~~L~~~g- 333 (471)
.+ ...........|+|+...++++..|++.+...+ +++..++..+.++++.+.|++.+
T Consensus 243 -----~~--~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~ 315 (397)
T TIGR01976 243 -----TF--SYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPG 315 (397)
T ss_pred -----cC--ccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 00 000000011246788888888888887664322 45556666778888889998874
Q ss_pred ceEeeC---CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCC------CCCCCCCeeEEecCCCCCcCCCHHH
Q 012104 334 YSLVTG---GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD------SSALAPGGVRIGTPAMTSRGLLEKD 404 (471)
Q Consensus 334 ~~i~~~---~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~------~~~~~~~~iRig~~~~t~~g~~~~d 404 (471)
++++.+ ....+++.+.+. +.+..++.+.|.++||.++.+..+.. ..+...+.||||+...++ ++|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t----~~d 389 (397)
T TIGR01976 316 VTLYGVARLAARVPTVSFTVH--GLPPQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNT----AEE 389 (397)
T ss_pred EEEeCCCCccCCCceEEEEeC--CcCHHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCC----HHH
Confidence 888653 123445555443 45678888999999999987632210 011124689999977655 889
Q ss_pred HHHHHHHH
Q 012104 405 FEQIGEFL 412 (471)
Q Consensus 405 ~~~l~~~i 412 (471)
++++.+.|
T Consensus 390 i~~l~~~l 397 (397)
T TIGR01976 390 VDRLLEAL 397 (397)
T ss_pred HHHHHHhC
Confidence 99998764
No 33
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=5.3e-26 Score=230.44 Aligned_cols=341 Identities=13% Similarity=0.117 Sum_probs=230.8
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al 117 (471)
++...++++|++++...+...+ +.++..+..+....+.++ .+++.+++++|++.+ ..+.++++++++..++.++
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSLLQ-VCRKTFAEMIGGEEQ---GIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCcHHHHHHHHHHHH
Confidence 4556789999999987776544 344444444444445555 467889999998764 2234455578998888877
Q ss_pred c----CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCC
Q 012104 118 L----EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSA 191 (471)
Q Consensus 118 l----~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~ 191 (471)
+ ++||+|++.+.+|+++.... ..+...| .++..++++ +++.+|++++++.+.+ ++++|++. +|+
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~------~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYF------QSLESQG--YTVTEIPVD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHH------HHHHhCC--CEEEEEeeC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 5 67999999887776543210 0112234 344555555 4578999999998863 67877643 679
Q ss_pred CCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCC
Q 012104 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQP 268 (471)
Q Consensus 192 ~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~ 268 (471)
+|...|+++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||++ ||.| |+++.+++..
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~------- 217 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKL-----PIDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQVR------- 217 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhcccc-----ccCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCCC-------
Confidence 99999999999999999999999999876532 22222 6899999999964 7876 8887776421
Q ss_pred CCcccchHhhhh--hcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCe-e
Q 012104 269 EGAVYDFEDKIN--FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENH-L 345 (471)
Q Consensus 269 ~i~~~~l~~~i~--~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~-~ 345 (471)
+..... ........++++...++++..+++... ++.++..+++.++++++.+.|++.|+++...+..++ +
T Consensus 218 ------~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~ 290 (381)
T PRK02948 218 ------WKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCL 290 (381)
T ss_pred ------CCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCc
Confidence 000000 000111245777888888888887764 356778888999999999999998887653322222 1
Q ss_pred -EEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCC--------------CCCCCCCeeEEecCCCCCcCCCHHHHHHHHH
Q 012104 346 -VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD--------------SSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 410 (471)
Q Consensus 346 -~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~--------------~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~ 410 (471)
.++.+...+++++++...|+++||.++.+..+.. ..+...+.+||++...++ ++|++++.+
T Consensus 291 ~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t----~~di~~l~~ 366 (381)
T PRK02948 291 PHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTT----KDQIDTTIH 366 (381)
T ss_pred CCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCC----HHHHHHHHH
Confidence 1233333456777787788999999987642100 001124689999876654 899999999
Q ss_pred HHHHHHHH
Q 012104 411 FLHRAVTL 418 (471)
Q Consensus 411 ~i~~~l~~ 418 (471)
.|.++++.
T Consensus 367 ~l~~~~~~ 374 (381)
T PRK02948 367 ALETIGNQ 374 (381)
T ss_pred HHHHHHHH
Confidence 99887653
No 34
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=4.2e-26 Score=225.55 Aligned_cols=327 Identities=22% Similarity=0.207 Sum_probs=236.3
Q ss_pred eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 34 IELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 34 i~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
+++ +|.||+ +|.++++....+ .+|..|.+|+|...|+ +...++| +++++++|.+. .+..+||..
T Consensus 42 ~nf-~SNdYLGLa~~~~~~~a~~~~~-~~~g~g~~gsR~i~G~~~~h~~LE----~~lA~f~g~e~-----al~f~SGy~ 110 (388)
T COG0156 42 LNF-CSNDYLGLASHPELIEAAKAAI-RRYGVGAGGSRLISGTSDLHVELE----EELADFLGAEA-----ALLFSSGFV 110 (388)
T ss_pred Eee-eccCcccccCCHHHHHHHHHHH-HHhCCCCCCcCcccCCcHHHHHHH----HHHHHHhCCCc-----EEEEcccch
Confidence 444 588886 789999988776 4456688899966666 5556787 57899999986 366789999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-----CCc
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPK 183 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-----~pk 183 (471)
||..++.+|+++||.|+...+.|-+.+. .+..++. +.+.| .+.|+++||+++++. +++
T Consensus 111 AN~~~i~~l~~~~dli~~D~lnHASiid---------G~rls~a--~~~~f------~HnD~~~Le~~l~~~~~~~~~~~ 173 (388)
T COG0156 111 ANLGLLSALLKKGDLIFSDELNHASIID---------GIRLSRA--EVRRF------KHNDLDHLEALLEEARENGARRK 173 (388)
T ss_pred hHHHHHHHhcCCCcEEEEechhhhhHHH---------HHHhCCC--cEEEe------cCCCHHHHHHHHHhhhccCCCce
Confidence 9999999999999999999987655331 1223333 44455 357999999999762 256
Q ss_pred EEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-c--cC-CCCCC--CccEEEeCCCCcCCCCCeEEEE
Q 012104 184 LIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-Q--EA-ANPFE--YCHIVTTTTHKSLRGPRAGMIF 255 (471)
Q Consensus 184 lIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g--~~-~~p~~--~aDiv~~s~~K~l~GprgG~i~ 255 (471)
+|++. .|+.|...|+++|.++|++||+++++|++|+.|+... | .. .-.+. ..||+++|++|+| |--||++.
T Consensus 174 ~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~v~ 252 (388)
T COG0156 174 LIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGYIA 252 (388)
T ss_pred EEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCceee
Confidence 77765 7899999999999999999999999999999998763 2 11 11122 3489999999998 46789999
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCC-CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG-PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~-p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
++. .+.+.+.....|..+++ ..+...++...+++.+. ...+..++..++++.+++.+...|+
T Consensus 253 g~~---------------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~~~ 315 (388)
T COG0156 253 GSA---------------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKALGL 315 (388)
T ss_pred CcH---------------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 987 45554444333444433 33444445556676653 4567788889999999977777788
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.+. +..++++.+-+.+.. ...++...|.+.||.+.....|. .|..++.+|++.++. .+++|++++++++.+
T Consensus 316 ~~~--~s~s~I~pv~~gd~~-~a~~~s~~l~~~Gi~v~~i~~PT--Vp~gtarlRi~lta~----ht~~~I~~l~~~l~~ 386 (388)
T COG0156 316 VLL--PSESPIIPVILGDEE-RALEASRALLEEGIYVSAIRPPT--VPKGTARLRITLTAA----HTEEDIDRLAEALSE 386 (388)
T ss_pred ccC--CCCCCeeeeEeCCHH-HHHHHHHHHHHCCeeEeeecCCC--CCCCcceEEEEecCC----CCHHHHHHHHHHHHh
Confidence 762 456667666554322 24556666666699998866554 344568999998654 458999999999876
Q ss_pred H
Q 012104 415 A 415 (471)
Q Consensus 415 ~ 415 (471)
+
T Consensus 387 ~ 387 (388)
T COG0156 387 V 387 (388)
T ss_pred h
Confidence 4
No 35
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.95 E-value=3.6e-25 Score=223.31 Aligned_cols=345 Identities=14% Similarity=0.073 Sum_probs=227.3
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHH
Q 012104 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (471)
Q Consensus 34 i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~ 113 (471)
.-++|++..+++.|++++..... .+ ..++.+.++ .+++.+++++|++.++. +.+.+.||+.++.++
T Consensus 7 ~~~~pgP~~~~~~~~~a~~~~~~-~~-----------~~~~~~~~~-~~~~~l~~l~~~~~~~~-~i~~~~~gt~~l~~~ 72 (368)
T PRK13479 7 LLLTPGPLTTSRTVREAMLRDWG-SW-----------DDDFNALTA-SVRAKLVAIATGEEGYT-CVPLQGSGTFSVEAA 72 (368)
T ss_pred eeecCCCCCCCHHHHHHhCCCCC-CC-----------ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCcHHHHHHH
Confidence 35789999999999999875431 11 123445555 35688999999864321 344678899999999
Q ss_pred HHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-CCcEEE-Ec-CC
Q 012104 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLII-CG-GS 190 (471)
Q Consensus 114 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-~pklIi-~~-~s 190 (471)
+.+++.+||+|++.++.+.++.. . ..+...|. +++.++++ +++.+|++++++.+... ++++|+ ++ .|
T Consensus 73 ~~~l~~~~~~vlv~~~~~~~~~~--~-----~~~~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 142 (368)
T PRK13479 73 IGSLVPRDGKVLVPDNGAYGARI--A-----QIAEYLGI--AHVVLDTG-EDEPPDAAEVEAALAADPRITHVALVHCET 142 (368)
T ss_pred HHhccCCCCeEEEEeCCchHHHH--H-----HHHHHcCC--cEEEEECC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccC
Confidence 99999999999998765543210 0 01122343 44444444 34679999999988642 345565 44 57
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCCCC
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPKKG 266 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~~~ 266 (471)
++|...|+++|.++|+++|+++++|++|..|. .+.++. ++|++++|+||++.||.| |+++++++.. .....
T Consensus 143 ~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~-----~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~ 217 (368)
T PRK13479 143 TTGILNPLDEIAAVAKRHGKRLIVDAMSSFGA-----IPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGN 217 (368)
T ss_pred ccccccCHHHHHHHHHHcCCEEEEEcccccCC-----ccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcC
Confidence 89999999999999999999999999886552 223333 689999999999988877 9998876421 11100
Q ss_pred CCCCcccchHhhhhhcCCC-CCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC-C-
Q 012104 267 QPEGAVYDFEDKINFAVFP-SLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGYSLVTGGT-E- 342 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~-~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~-~- 342 (471)
.... +.++.......... ....+|+...++++..++..+... ++++..+++.++++.+.+.|++.|++++..+. .
T Consensus 218 ~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~ 296 (368)
T PRK13479 218 SRSL-SLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQS 296 (368)
T ss_pred CCCe-eecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcC
Confidence 0000 00111111100000 111256667777888888776544 35777888999999999999999998754321 1
Q ss_pred CeeEEEEccC-CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 343 NHLVLWDLRP-LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 343 ~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+..+.+.+.. .+++..++.+.|.+.||.+.++..+ ..+.+|+|+... .+++|++++.+.|.+++..
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~------~~~~iRis~~~~----~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 297 PIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLT------QVDTFRIGCIGD----VDAADIRRLVAAIAEALYW 363 (368)
T ss_pred ceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCC------CCCEEEEecCCC----CCHHHHHHHHHHHHHHHHH
Confidence 1122222222 2357788888999999999765321 136899997333 3489999999999988764
No 36
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=3.5e-25 Score=224.57 Aligned_cols=332 Identities=14% Similarity=0.063 Sum_probs=212.7
Q ss_pred CCeeEecC--CCCCcHHHHHHHhhhhhccCCCCCCCC-CCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 32 RGIELIAS--ENFTSFAVIEALGSALTNKYSEGMPGN-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 32 ~~i~li~s--~n~~s~~v~~a~~~~l~~~~~~g~~~~-r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
.-|+|.|- -..+++++++++..... .+ +.|.. .+..+......++ .+++.+++++|++. + +.++||+.
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~-~~--~~~~~~~~~~~~~~~~~~~-~l~~~lA~~~g~~~----~-~~~~g~t~ 89 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGD-GY--SVCDYCPGRLDQIKKPPIA-DFHEDLAEFLGMDE----A-RVTHGARE 89 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHh-cc--CCCcccccccccccChHHH-HHHHHHHHHhCCCc----E-EEeCCHHH
Confidence 34666443 35678999999987663 22 22211 1111211112233 34578999999975 3 34677889
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec-CCCCCCCHHHHHHHhhhC------C
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEKALDF------R 181 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~-~~~~~iD~~~le~~~~~~------~ 181 (471)
|+.+++.++++|||+|++..+.|.+.+. .+...|. +++.++++ .+++.+|++++++.+.+. +
T Consensus 90 a~~~al~~l~~~gd~Vlv~~~~h~s~~~---------~~~~~G~--~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 158 (387)
T PRK09331 90 GKFAVMHSLCKKGDYVVLDGLAHYTSYV---------AAERAGL--NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKP 158 (387)
T ss_pred HHHHHHHHhcCCCCEEEECCCchHHHHH---------HHHHcCC--EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCC
Confidence 9999999999999999998876554321 1223343 55555552 145789999999998643 6
Q ss_pred CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCC-CeEEEEe
Q 012104 182 PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGP-RAGMIFY 256 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gp-rgG~i~~ 256 (471)
+++|++. .+++|...|+++|.++|+++|+++++|++|+.|. .|.+.. ++|++++|+||++++| ++|++++
T Consensus 159 ~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~-----~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~ 233 (387)
T PRK09331 159 PALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR-----MPVDGKKLGADFIVGSGHKSMAASAPSGVLAT 233 (387)
T ss_pred CEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC-----cCCCHHHcCCCEEEeeCcccccCCCCEEEEEE
Confidence 7888754 5679999999999999999999999999998663 222222 6899999999998765 5688888
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcC--C-----CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAV--F-----PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~--~-----~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
+++ +.+.+.... | ....++.....++++..++..+.. .. +..++..++++++++.|
T Consensus 234 ~~~---------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~-~~-~~~~~~~~~~~~l~~~L 296 (387)
T PRK09331 234 TEE---------------YADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVE-RV-KRWDEEVKKARWFVDEL 296 (387)
T ss_pred CHH---------------HHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHH
Confidence 763 222221110 0 001112222223333345544432 22 34455678899999999
Q ss_pred HcC-CceEeeC-CCCCeeEEEEcc-------CCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 330 TGK-GYSLVTG-GTENHLVLWDLR-------PLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 330 ~~~-g~~i~~~-~~~~~~~~v~~~-------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
.+. |++++.. ...+.++.++.+ ..+.++.++.+.|.++||.... ++ ....+|+++ .|.
T Consensus 297 ~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~-----~~~i~ri~~-----~g~ 363 (387)
T PRK09331 297 EKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK---PG-----ATKEFKLST-----YGL 363 (387)
T ss_pred hcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc---cC-----CceEEEEEe-----ccC
Confidence 999 9998742 123334445533 1123446688889999997321 11 134577776 345
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~~ 418 (471)
+++|++++.++|.++++.
T Consensus 364 t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 364 TWEQVEYVADAFKEIAEK 381 (387)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 689999999999887654
No 37
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=8.4e-25 Score=222.03 Aligned_cols=344 Identities=13% Similarity=0.044 Sum_probs=216.2
Q ss_pred ccccccChHHHHHHHHHHH----hccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHH
Q 012104 10 SSLETVDPEIHDLIEKEKR----RQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (471)
Q Consensus 10 ~~~~~~d~~~~~~~~~e~~----~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~ 83 (471)
..++...+.....+.+... ...+.+.|..+++. +++.+++++.+.+.+.. .+|+. ......+.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia 79 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA------ARGLPALREAIA 79 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC------CCCCHHHHHHHH
Confidence 3344455544444333322 22466888877754 47899999988775421 12221 122234444334
Q ss_pred HHHHHhcCCCCCCCceeeecC-ChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec
Q 012104 84 SRALQTFHLDPTQWGVNVQPY-SGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~-sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~ 162 (471)
+++.+.+|...+. -+|..+ ++++|+..++.++++|||+|++++|+|+++.. .+...|. +++.++++
T Consensus 80 ~~~~~~~g~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g~--~~~~v~~~ 146 (387)
T PRK08960 80 GFYAQRYGVDVDP--ERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH---------FLRLVEG--AAQLVPVG 146 (387)
T ss_pred HHHHHHhCCCCCh--hhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcCC--eEEEEecC
Confidence 5555555543222 134444 45679999999999999999999999987753 1223343 44455555
Q ss_pred CC-CCCCCHHHHHHHhhhCCCcEEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhccccCCCCCC-Cc
Q 012104 163 SS-TGYIDYDKLEEKALDFRPKLII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC 235 (471)
Q Consensus 163 ~~-~~~iD~~~le~~~~~~~pklIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~a 235 (471)
.+ ++.+|++++++.+.+ ++++++ ++ +||+|..++.++ |+++|+++|+++++|++|. ++.+.+..++.+. ..
T Consensus 147 ~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~-~~~~~~~~~~~~~~~~ 224 (387)
T PRK08960 147 PDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYH-GLTYGVDAASVLEVDD 224 (387)
T ss_pred cccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhccC
Confidence 43 457999999998864 455554 55 789999998764 5567899999999999986 6655433222222 22
Q ss_pred c-EEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 236 H-IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 236 D-iv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
+ ++++|+||++ +|.|.||+++++ ++.+.+.........+.+...+.+ ...++........+
T Consensus 225 ~vi~~~S~SK~~g~~GlRiG~~~~~~---------------~~~~~~~~~~~~~~~~~s~~~q~a-~~~~l~~~~~~~l~ 288 (387)
T PRK08960 225 DAFVLNSFSKYFGMTGWRLGWLVAPP---------------AAVPELEKLAQNLYISASTPAQHA-ALACFEPETLAILE 288 (387)
T ss_pred CEEEEeecccccCCcccEEEEEEcCH---------------HHHHHHHHHHhhhccCCCHHHHHH-HHHHhhcCcHHHHH
Confidence 3 7889999984 888999999987 455444432222222222333333 33345432223456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHH-HHhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 313 AYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEK-LCDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
+..+++.++.+.+.+.|++.|+.+...+.++.++|+++...+.+..++.+ +++++||.+.++..++.. ...+++||+
T Consensus 289 ~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--~~~~~iRi~ 366 (387)
T PRK08960 289 ARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRH--QAGQHVRFA 366 (387)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCC--CCCCeEEEE
Confidence 66777788888899999888876533345677889988643456677754 457899999988766432 124689999
Q ss_pred cC
Q 012104 392 TP 393 (471)
Q Consensus 392 ~~ 393 (471)
+.
T Consensus 367 ~~ 368 (387)
T PRK08960 367 YT 368 (387)
T ss_pred ec
Confidence 84
No 38
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.95 E-value=5.1e-25 Score=223.37 Aligned_cols=311 Identities=17% Similarity=0.219 Sum_probs=218.2
Q ss_pred CcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCcccee
Q 012104 70 GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA 149 (471)
Q Consensus 70 ~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~ 149 (471)
++.....++| +.++++||.++ .|.++||+.|+.+++.++++|||+| ++++.+..+.. .+..
T Consensus 50 ~~~~g~~~Le----eaia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~~---------~i~~ 110 (431)
T cd00617 50 AGSKSFYDLE----DAVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTRG---------HIEA 110 (431)
T ss_pred CCCCCHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchHH---------HHHh
Confidence 3344455666 56778999875 3668899999999999999999988 35544443321 1223
Q ss_pred ccceeEEEeeeecC---------CCCCCCHHHHHHHhhhC---CCcEEEEc--CCCC-CccccH---HHHHHHHHHhCCE
Q 012104 150 TSIYFESLPYKVNS---------STGYIDYDKLEEKALDF---RPKLIICG--GSAY-PRDWDY---ARFRAVADKCGAL 211 (471)
Q Consensus 150 ~g~~~~~~~~~v~~---------~~~~iD~~~le~~~~~~---~pklIi~~--~s~~-g~~~d~---~~i~~ia~~~g~~ 211 (471)
.|. +++.+++++ .++.+|+++|++.+.+. ++++|+++ +|++ |.+++. ++++++|+++|++
T Consensus 111 ~Ga--~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~ 188 (431)
T cd00617 111 NGA--VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIP 188 (431)
T ss_pred CCC--EeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 443 445555543 23569999999999753 36777654 5555 788765 4678999999999
Q ss_pred EEEeccccchhh-c-----cccCCCC--------CCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHh
Q 012104 212 LLCDMAHISGLV-A-----AQEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFED 277 (471)
Q Consensus 212 livD~a~~~glv-~-----~g~~~~p--------~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~ 277 (471)
|+.|++|.++-. + .|....+ +.++|.+++|++|.+.+|-||+++++++ ++.+
T Consensus 189 li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~--------------~l~~ 254 (431)
T cd00617 189 VVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD--------------ELYE 254 (431)
T ss_pred EEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH--------------HHHH
Confidence 999999876411 1 2222222 2368999999999988888999999874 4666
Q ss_pred hhhhcC--CCC--CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC
Q 012104 278 KINFAV--FPS--LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL 353 (471)
Q Consensus 278 ~i~~~~--~~~--~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~ 353 (471)
+++... +++ ..|+.....++|++++|.+... .++.++..+++++|.+.|.+.|+.++. +.++|.+++|+...
T Consensus 255 ~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~G~~v~~-P~Ggh~v~~d~~~~ 330 (431)
T cd00617 255 EARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEAGVPIVE-PAGGHAVFIDAREF 330 (431)
T ss_pred HHHHhccccCCccccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHCCCCccC-CCcceEEEEEhHHh
Confidence 665432 222 2356677777888888877533 255666677889999999999999864 57789999997632
Q ss_pred -------CCCHHHH-HHHHhhcCeEecc-CCc--CCCCCC-----CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 354 -------GLTGNKV-EKLCDLCNITVNK-NAV--FGDSSA-----LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 354 -------~~~~~~~-~~~L~~~gI~v~~-~~~--p~~~~~-----~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+.++.++ .+++++.||.+.. +++ +.|+.. .....+||++| +|+++.++|+.+++.|.++.+
T Consensus 331 ~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~p---rr~~t~~~~~~~~~~~~~~~~ 407 (431)
T cd00617 331 LPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIP---RRVYTQDHMDYVAAAVIALYE 407 (431)
T ss_pred cCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEecc---ccccCHHHHHHHHHHHHHHHh
Confidence 2245665 5888999999643 432 333211 12368999986 789999999999999999988
Q ss_pred HHHHH
Q 012104 418 LTLEI 422 (471)
Q Consensus 418 ~~~~~ 422 (471)
+...+
T Consensus 408 ~~~~~ 412 (431)
T cd00617 408 RREDI 412 (431)
T ss_pred hHhhC
Confidence 76544
No 39
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=3.2e-25 Score=221.82 Aligned_cols=319 Identities=18% Similarity=0.138 Sum_probs=215.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHD 122 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD 122 (471)
+|+|++++...+.+ |..++.+.+++.| +.....+ ++++++++|++. .+.++||++++.+++.++++|||
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd 86 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTSDLHEEL----EEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGD 86 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCchHHHHH----HHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCC
Confidence 58999999998864 4444333344433 3444444 467888999864 36678999999999999999999
Q ss_pred EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh----CCCcEEEEc--CCCCCccc
Q 012104 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD----FRPKLIICG--GSAYPRDW 196 (471)
Q Consensus 123 ~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~----~~pklIi~~--~s~~g~~~ 196 (471)
+|++.++.|++... .....|. +++.++ .+|++++++++++ .++++|+++ +|++|...
T Consensus 87 ~Vl~~~~~~~~~~~---------~~~~~g~--~~~~~~------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~ 149 (349)
T cd06454 87 LIISDSLNHASIID---------GIRLSGA--KKRIFK------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA 149 (349)
T ss_pred EEEEehhhhHHHHH---------HHHHcCC--ceEEec------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc
Confidence 99999988765432 1122343 333332 3688999998875 356777765 57899999
Q ss_pred cHHHHHHHHHHhCCEEEEeccccchhhcc-cc----CCCCCCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCc
Q 012104 197 DYARFRAVADKCGALLLCDMAHISGLVAA-QE----AANPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGA 271 (471)
Q Consensus 197 d~~~i~~ia~~~g~~livD~a~~~glv~~-g~----~~~p~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~ 271 (471)
|+++|+++|+++|+++++|++|..|.... +. ......+.|++++|+||++. ++||+++.++
T Consensus 150 ~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------------- 215 (349)
T cd06454 150 PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------------- 215 (349)
T ss_pred CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH-------------
Confidence 99999999999999999999997665421 11 01111267899999999974 5789888776
Q ss_pred ccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEc
Q 012104 272 VYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (471)
Q Consensus 272 ~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~ 350 (471)
++.+.+.....+.. .+++....++++..+++.... .+...+++.++++.+.+.|.+.|+.++.. ..+.+.++.+
T Consensus 216 --~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~~~ 290 (349)
T cd06454 216 --ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGS-PSHIIPPLIG 290 (349)
T ss_pred --HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCcEEEEeC
Confidence 44444443322222 234455566666667766543 45677888899999999999888877533 2333333322
Q ss_pred cCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 351 RPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 351 ~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.+.+..++.+.|.+.||.+.+...+. .+...+.+|++++... ++++++++.+.|+++
T Consensus 291 -~~~~~~~~~~~~L~~~gI~~~~~~~~~--~~~~~~~iRi~~~~~~----~~~~i~~~~~~l~~~ 348 (349)
T cd06454 291 -DDPAKAVAFSDALLERGIYVQAIRYPT--VPRGTARLRISLSAAH----TKEDIDRLLEALKEV 348 (349)
T ss_pred -CChHHHHHHHHHHHhCCceEEEecCCc--cCCCCCeEEEEEeCCC----CHHHHHHHHHHHHHh
Confidence 223456778888888899998643221 1122478999985443 489999999998753
No 40
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=7.2e-25 Score=222.19 Aligned_cols=339 Identities=15% Similarity=0.179 Sum_probs=228.3
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC-CCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL-DPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~-~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
++....++.|++++...+.+.|. +|+..+..+......+++ +++.+.+.+|+ +.+ ..+.+.++++++..++.+
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~~--n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~---~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIYG--NPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD---DIIITSCATESNNWVLKG 79 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcCc--CCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC---eEEEeCCHHHHHHHHHHH
Confidence 34566789999999888876653 454333223344455654 45566667786 333 234455667799988887
Q ss_pred hc-----CC-CCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--
Q 012104 117 VL-----EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-- 188 (471)
Q Consensus 117 ll-----~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-- 188 (471)
+. ++ ||+|++...+|+++.... ..+...| .+++.++++ +++.+|++++++.+.. ++++|++.
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~------~~~~~~G--~~v~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATC------AFLESLG--VEVTYLPIN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHH------HHHHHCC--CEEEEEecC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 62 56 478999988877654211 0111223 455566666 4578999999998864 67877644
Q ss_pred CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC--CC
Q 012104 189 GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK--PP 263 (471)
Q Consensus 189 ~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~--~~ 263 (471)
+|++|...|+++|.++|+++|+++++|++|..|. .+..+. ++|++++|+||+ .||.| |+++.++... +.
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~-----~~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~~p~ 223 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK-----IPVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVELTPL 223 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCC-----CccCccccCCCEEEEcchhh-CCCCceEEEEECCCCCCCCc
Confidence 7889999999999999999999999999987553 222232 689999999997 58886 8887776531 10
Q ss_pred CCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC-
Q 012104 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT- 341 (471)
Q Consensus 264 ~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~- 341 (471)
..++. ... ....|+++...+.+++.+++.... ..+...+++...+++|.+.|.+. |+.++.+..
T Consensus 224 ~~g~~---------~~~----~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~ 289 (382)
T TIGR03403 224 FHGGE---------HMG----GRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREH 289 (382)
T ss_pred ccCCC---------CCC----CcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 00000 000 112367888888888888876543 45666777888888999999875 788764321
Q ss_pred -CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--------------CCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 342 -ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--------------SALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 342 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--------------~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
..+++.+.+ .++++.++...|.+.||.++.++.+... .+...+.||+|+...++ ++|++
T Consensus 290 ~~~~~~~~~~--~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t----~~did 363 (382)
T TIGR03403 290 RVPNTILISI--KGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTT----EEEID 363 (382)
T ss_pred CcCCEEEEEe--CCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCC----HHHHH
Confidence 123444444 3678888888899999999976422100 01123679999987765 89999
Q ss_pred HHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTL 418 (471)
Q Consensus 407 ~l~~~i~~~l~~ 418 (471)
++.+.|.++++.
T Consensus 364 ~~~~~l~~~~~~ 375 (382)
T TIGR03403 364 YTIEVFKKAVQR 375 (382)
T ss_pred HHHHHHHHHHHH
Confidence 999999887764
No 41
>PRK12414 putative aminotransferase; Provisional
Probab=99.95 E-value=1.7e-24 Score=219.56 Aligned_cols=354 Identities=14% Similarity=0.150 Sum_probs=225.7
Q ss_pred ccccChHHHHHHHHHHHhccCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 012104 12 LETVDPEIHDLIEKEKRRQCRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (471)
Q Consensus 12 ~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~l 89 (471)
+..+.+.+...+... .++.+.|+|..+++.. ++.+.+++...+.... .+| +.......+.+...++++++
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y------~~~~G~~~lr~~ia~~l~~~ 82 (384)
T PRK12414 11 LPDVGTTIFTVIGQL-AAQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQY------APMAGIAALREALAEKTERL 82 (384)
T ss_pred cccCCccHHHHHHHH-HHhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCc------CCCCCcHHHHHHHHHHHHHH
Confidence 444455566665443 3556779998777543 6788888876554321 122 22222344555556788888
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCC
Q 012104 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (471)
Q Consensus 90 fg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD 169 (471)
+|++.....-.+.++++++|+..++.++++|||+|++.+|+|.++.. .+...| .+++.++++++++.+|
T Consensus 83 ~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~d 151 (384)
T PRK12414 83 YGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP---------IVRLQG--ATPVAIKLSPEDFRVN 151 (384)
T ss_pred hCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH---------HHHHcC--CEEEEEecCccccccC
Confidence 89853210012445566789999999999999999999999876432 122334 3556666665567899
Q ss_pred HHHHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC---C-c--cEE
Q 012104 170 YDKLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---Y-C--HIV 238 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~---~-a--Div 238 (471)
++++++.++ .++|+|+++ +||+|..++ +++|.++|+++|+++++|++|. .+.+.+..+.++. . . -|+
T Consensus 152 ~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i~ 229 (384)
T PRK12414 152 WDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSVI 229 (384)
T ss_pred HHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEEE
Confidence 999999886 478888754 789999865 5677788999999999999997 5555443222221 1 2 289
Q ss_pred EeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHH
Q 012104 239 TTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (471)
Q Consensus 239 ~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~ 316 (471)
+.|++|++ +|.|.||+++++ ++.+.+.........+.+...+ .++..++.. ...+.+..+
T Consensus 230 ~~SfSK~~~~pGlRiG~~v~~~---------------~l~~~l~~~~~~~~~~~s~~~q-~a~~~~l~~--~~~~~~~~~ 291 (384)
T PRK12414 230 VSSFGKSYHVTGWRVGYCLAPA---------------ELMDEIRKVHQFMVFSADTPMQ-HAFAEALAE--PASYLGLGA 291 (384)
T ss_pred EecccccccCccceEEEEecCH---------------HHHHHHHHHHhheecCCCcHHH-HHHHHHhcC--ChHHHHHHH
Confidence 99999985 889999999887 4444444322111112222222 233334432 123445566
Q ss_pred HHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC-C-CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 317 QVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL-G-LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 317 ~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~-~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
.+.++++.+.+.|++.|+.+. .+.++.++|+++.+. + .+.+.+.+.|+++||.+.++..++.. ....+++||++..
T Consensus 292 ~~~~~r~~l~~~L~~~g~~~~-~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~-~~~~~~iRis~~~ 369 (384)
T PRK12414 292 FYQRKRDLLARELAGSRFELL-PSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTD-GTDTGLIRLSFSK 369 (384)
T ss_pred HHHHHHHHHHHHHHhCCCeec-CCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCC-CCCCCEEEEEecC
Confidence 778888899999998888764 445677888887542 2 23444567888999999887655321 1124789999842
Q ss_pred CCCcCCCHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i 412 (471)
.++++++..+.|
T Consensus 370 ------~~~~~~~~~~rl 381 (384)
T PRK12414 370 ------DDATLVEGARRL 381 (384)
T ss_pred ------CHHHHHHHHHHH
Confidence 255555555444
No 42
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=2.4e-24 Score=218.97 Aligned_cols=369 Identities=17% Similarity=0.142 Sum_probs=230.2
Q ss_pred CCcccccccccccccChHHHHHHHHHHHhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHH
Q 012104 1 MDPVNEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEI 78 (471)
Q Consensus 1 ~~~~~~~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~l 78 (471)
||.-.+| ++++...+.....-+.+....-...|+|..+++. .++.+.+++...+...+. .| +.......+
T Consensus 1 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y------~~~~g~~~l 72 (391)
T PRK07309 1 MDLTKRF-NKQLDKIEVSLIRQFDQSISDIPGILKLTLGEPDFTTPDHVKEAAKRAIDANQS-HY------TGMAGLLEL 72 (391)
T ss_pred CchhhHH-HhhhhhcCccHHHHHHHHHHhcCCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CC------CCCCCcHHH
Confidence 5655665 3445444443433333322222456777666543 366778888766543221 22 222223456
Q ss_pred HHHHHHHHHHhcCCCCCCCceeee-cCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEE
Q 012104 79 ENLCRSRALQTFHLDPTQWGVNVQ-PYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (471)
Q Consensus 79 E~~~~~~~~~lfg~~~~~~~~~v~-~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~ 157 (471)
++.+.+++.+.+|...... .+|. +.++++|+.+++.++++|||+|++.+|.|+++.. .+...| .+++
T Consensus 73 r~~ia~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g--~~~~ 140 (391)
T PRK07309 73 RQAAADFVKEKYNLDYAPE-NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEP---------IVNLVG--AEIV 140 (391)
T ss_pred HHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH---------HHHHcC--CEEE
Confidence 5555566665566532110 1243 4455689999999999999999999999987642 122334 3555
Q ss_pred eeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDF--RPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
.+++++.++.+|++.+++.+... ++++|+++ +||+|..++ +++|.++|+++|+++++|++|. .+.+.+..+.
T Consensus 141 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~-~~~~~~~~~~ 219 (391)
T PRK07309 141 EIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYS-ELTYTGEPHV 219 (391)
T ss_pred EEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcccc-ceeeCCCCCC
Confidence 66665445679999999988642 57877744 789999886 6677888999999999999997 6665443222
Q ss_pred CCC--Ccc--EEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 231 PFE--YCH--IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 231 p~~--~aD--iv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
++. ..+ +++.|+||++ +|.|.||+++++ ++.+.+.... +....+++.....+...++.
T Consensus 220 ~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~---------------~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~ 283 (391)
T PRK07309 220 SIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA---------------EFTAQLIKSH-QYLVTAATTMAQFAAVEALT 283 (391)
T ss_pred CHHHhccCCEEEEecChhhccCccceeEEEEeCH---------------HHHHHHHHHH-hhcccCCChHHHHHHHHHHh
Confidence 221 123 8899999994 889999999987 4444444322 11111222223333334454
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC-CCCHHHHH-HHHhhcCeEeccCCcCCCCCC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL-GLTGNKVE-KLCDLCNITVNKNAVFGDSSA 382 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~-~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~ 382 (471)
+. ........+++.++++.+.+.|++.|+.+. .+..+.++|++++.. +.+..++. +++++.||.+.++..++.
T Consensus 284 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~--- 358 (391)
T PRK07309 284 NG-KDDALPMKKEYIKRRDYIIEKMTDLGFKII-KPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGP--- 358 (391)
T ss_pred CC-hhHHHHHHHHHHHHHHHHHHHHHHCCCeec-CCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---
Confidence 32 122344566777788889999988888774 345567778887532 22455665 567789999988765542
Q ss_pred CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 383 LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 383 ~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
...++|||++.. ..+++++..+.|.++++
T Consensus 359 ~~~~~iRi~~~~------~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 359 YGEGYVRLSYAA------SMETIKEAMKRLKEYME 387 (391)
T ss_pred CCCCEEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 235799999842 25677777777766654
No 43
>PLN02651 cysteine desulfurase
Probab=99.95 E-value=2.5e-25 Score=224.02 Aligned_cols=327 Identities=17% Similarity=0.184 Sum_probs=220.6
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r-~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
++...+++.|++++...+.+.+ ++|+.+ +..+.+..+.++ .+++.+++++|++.+ ..+.++|+|.|+.+++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESEDAVE-KARAQVAALIGADPK---EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHHH
Confidence 4566789999999988876554 344431 111223344455 457889999999764 235566778888777655
Q ss_pred h----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CC
Q 012104 117 V----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GS 190 (471)
Q Consensus 117 l----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s 190 (471)
+ +++||+|++.+..|++...-. ..+...| .+++.++++ +++.+|++++++.+.+ ++++|++. +|
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~------~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n 149 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSC------RHLQQEG--FEVTYLPVK-SDGLVDLDELAAAIRP-DTALVSVMAVNN 149 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHH------HHHHhcC--CEEEEEccC-CCCcCCHHHHHHhcCC-CcEEEEEECCCC
Confidence 4 578999999887776532100 0111123 345555555 4578999999999964 68888754 67
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCC-CCCC
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKG 266 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~-~~~~ 266 (471)
++|...|+++|.++|+++|+++++|++|++|. .|..+. ++|++++|.||| .||.| |+++.+++... ..+.
T Consensus 150 ~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~-----~~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~ 223 (364)
T PLN02651 150 EIGVIQPVEEIGELCREKKVLFHTDAAQAVGK-----IPVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPL 223 (364)
T ss_pred CceecccHHHHHHHHHHcCCEEEEEcchhhCC-----cccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCcc
Confidence 89999999999999999999999999998663 233333 689999999997 68987 88888774211 1000
Q ss_pred CCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc-C-CceEeeCCC-C-
Q 012104 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG-K-GYSLVTGGT-E- 342 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~-~-g~~i~~~~~-~- 342 (471)
+. . .........|+|+...++++..|++.+.. +.++..++....++++.+.|++ . |++++.+.. .
T Consensus 224 ---~~--g-----~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~ 292 (364)
T PLN02651 224 ---MS--G-----GGQERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEK 292 (364)
T ss_pred ---cc--C-----CCccCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCccc
Confidence 00 0 00001123578899999999999988764 5577778888888999999875 3 888875311 1
Q ss_pred --CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC-----------C---CCCCCeeEEecCCCCCcCCCHHHH
Q 012104 343 --NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-----------S---ALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 343 --~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-----------~---~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
.+++.+.+ .+++++++.+.|.+ |.++.++..... + ....+.+|+|+..+|| ++|+
T Consensus 293 ~~~~i~~~~~--~~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t----~~di 363 (364)
T PLN02651 293 RYPGTLNLSF--AYVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTT----EEEV 363 (364)
T ss_pred CcCCEEEEEe--CCCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCC----HHHc
Confidence 23444444 47788899888876 888876532111 0 0124789999988876 5665
No 44
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-24 Score=219.42 Aligned_cols=335 Identities=18% Similarity=0.105 Sum_probs=216.7
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..+++. .++.+.+++...+.+....+|+. .|. ..+.+...+++.+.+|.+.+. ..+|..++|+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G~---~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~ 103 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SGI---QEFHEAVTEYYNNTHNVILNA-DKEVLLLMGSQ 103 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CCc---HHHHHHHHHHHHHHhCCCCCC-CCeEEECCCcH
Confidence 456888777653 46788888877654321123321 122 234333345555555643221 0145555655
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||+|++++|+|+++.. .+...| .++++++++++ ++.+|++++++.+. .++|+|+
T Consensus 104 ~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G--~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~ 171 (399)
T PRK07681 104 DGLVHLPMVYANPGDIILVPDPGYTAYET---------GIQMAG--ATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMI 171 (399)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhcC--CEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEE
Confidence 69999999999999999999999987643 122334 46666676644 36789999998875 4788887
Q ss_pred Ec--CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CC---ccEEEeCCCCcC--CCCCeEE
Q 012104 187 CG--GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY---CHIVTTTTHKSL--RGPRAGM 253 (471)
Q Consensus 187 ~~--~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~---aDiv~~s~~K~l--~GprgG~ 253 (471)
++ +||+|..++. ++|.++|+++|++||+|++|. .+.+.+..+.++ .. -.|++.|++|++ +|.|.||
T Consensus 172 l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~ 250 (399)
T PRK07681 172 LNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYA-EFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGY 250 (399)
T ss_pred EeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEE
Confidence 44 7899999984 566778999999999999997 666544322221 11 238889999985 7889999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
+++++ ++.+.+.........+.+...+ .+...++... ...+++..+.+.++.+.+.+.|++.|
T Consensus 251 ~i~~~---------------~l~~~~~~~~~~~~~~~s~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~g 313 (399)
T PRK07681 251 MIGNE---------------EIVRALTQFKSNTDYGVFLPIQ-KAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTFG 313 (399)
T ss_pred EecCH---------------HHHHHHHHHHhhcccCCCHHHH-HHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99876 4555554332111112222222 2333344332 23446666677888888999999888
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+++. .+.++.++|+++.+ +++..++...| +++||.+.++..++.. .++++||++. . .++++++..+.|
T Consensus 314 ~~~~-~p~~g~f~~~~l~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~--~----~~~~~~~~l~~l 382 (399)
T PRK07681 314 WNVD-KPAGSMFVWAEIPK-GWTSLSFAYALMDRANVVVTPGHAFGPH---GEGFVRIALV--Q----DEEVLQQAVENI 382 (399)
T ss_pred Cccc-CCCeeeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCChhhCcC---CCCeEEEEec--C----CHHHHHHHHHHH
Confidence 8763 34567788999864 56667775555 5599999887654321 2478999983 2 367777777776
Q ss_pred HH
Q 012104 413 HR 414 (471)
Q Consensus 413 ~~ 414 (471)
.+
T Consensus 383 ~~ 384 (399)
T PRK07681 383 RN 384 (399)
T ss_pred HH
Confidence 55
No 45
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=1.3e-24 Score=217.88 Aligned_cols=342 Identities=17% Similarity=0.127 Sum_probs=222.6
Q ss_pred eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 35 ~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
-+.|++..+++.|++++...+ +.+. ..+.+.+++ .++.+++++|++..+. ..+.+.||+.++.+++
T Consensus 2 ~~~p~p~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~-~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~ 67 (355)
T TIGR03301 2 LLTPGPLSTSATVRDAMLVDW-CHWD-----------SEFNDVTDQ-VRDRLLALAGGDDNHT-CVLLQGSGTFAVEATI 67 (355)
T ss_pred cCcCCCCCCCHHHHHHhhhhc-cCCC-----------HHHHHHHHH-HHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHH
Confidence 367888889999999997632 2221 123344443 4688999999986421 2234678899999999
Q ss_pred HHhcCCCCEEEEeCCCCCCc-ccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-CCcEEEE--cCC
Q 012104 115 TAVLEPHDRIMGLDLPSGGH-LTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-RPKLIIC--GGS 190 (471)
Q Consensus 115 ~all~pGD~Vl~~~~~~~g~-~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-~pklIi~--~~s 190 (471)
.+++++||+|++.++.+.++ +.+ .+...|. +++.++++ +++.+|++++++.+.++ ++++|+. .++
T Consensus 68 ~~~~~~~~~vi~~~~~~~~~~~~~--------~a~~~g~--~~~~i~~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 136 (355)
T TIGR03301 68 GSLVPRDGKLLVLINGAYGERLAK--------ICEYLGI--PHTDLNFS-EYEPPDLNRIEEALAADPDITHVATVHHET 136 (355)
T ss_pred HhccCCCCeEEEECCCchhhHHHH--------HHHHcCC--ceEEEecC-CCCCCCHHHHHHHHHhCCCceEEEEEecCC
Confidence 99999999988776544332 111 1122333 44445544 34789999999998752 3345543 367
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCC
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQ 267 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~ 267 (471)
++|...|+++|.++|+++|+++++|++|+.|. .+.++. ++|++++|+||++.||.| |++++++++.......
T Consensus 137 ~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~-----~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~ 211 (355)
T TIGR03301 137 TTGILNPLEAIAKVARSHGAVLIVDAMSSFGA-----IPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGN 211 (355)
T ss_pred cccchhHHHHHHHHHHHcCCEEEEEeccccCC-----cccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCC
Confidence 88999999999999999999999999887552 222333 689999999999877765 8888876421100000
Q ss_pred CCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHcCCceEeeCC-CCCe
Q 012104 268 PEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGKGYSLVTGG-TENH 344 (471)
Q Consensus 268 ~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~~~~~~-~~~~~~~~~~na~~l~~~L~~~g~~i~~~~-~~~~ 344 (471)
..-..+++...+.... ......+++...+.++..+++.+...+ +++..+++.++++++.+.|++.|++++... ..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~ 291 (355)
T TIGR03301 212 ARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSP 291 (355)
T ss_pred CCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCC
Confidence 0000001111000000 001123566667777777787765544 777888889999999999998898865432 2233
Q ss_pred -eEEEEccCC-CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 345 -LVLWDLRPL-GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 345 -~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
++++.++.. ..+..++.+.|.+.||.+.++..+ ..+++||++...+ +++|++++.+.|.+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~------~~~~iRis~~~~~----~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 292 IIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT------LADTFRIGTIGEI----DAADIERLLEAIKDAL 355 (355)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHCCEEEECCccc------cccEEEEecCCCC----CHHHHHHHHHHHHhhC
Confidence 456666431 245678889999999999875321 1268999974443 4899999999997653
No 46
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.9e-24 Score=219.58 Aligned_cols=354 Identities=15% Similarity=0.065 Sum_probs=223.4
Q ss_pred cChHHHHHHHHHHHhccCCeeEecCCC-C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC
Q 012104 15 VDPEIHDLIEKEKRRQCRGIELIASEN-F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL 92 (471)
Q Consensus 15 ~d~~~~~~~~~e~~~~~~~i~li~s~n-~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~ 92 (471)
..+.++..+..-..+-...++|..+++ + .++.+.+++...+.+....+|+. ......+.+..++++++.+|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~------~~G~~~lr~~~~~~l~~~~g~ 84 (389)
T PRK05957 11 VQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA------VQGIPPLLEAITQKLQQDNGI 84 (389)
T ss_pred cCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCC
Confidence 334444444433333345688877665 3 57788888877654321112221 122223334455777788887
Q ss_pred CCCCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHH
Q 012104 93 DPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYD 171 (471)
Q Consensus 93 ~~~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~ 171 (471)
+.+.. .+|.+++| ++++..++.++++|||+|++.+|.|..|.+ .+...| .+++.++++ +++.+|++
T Consensus 85 ~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~-~~~~~d~~ 151 (389)
T PRK05957 85 ELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM---------AITMAG--CQPILVPTD-DNYQLQPE 151 (389)
T ss_pred CCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH---------HHHhcC--CEEEEeecC-CCCCcCHH
Confidence 42100 13444555 578989999999999999999999877642 112234 455555555 45789999
Q ss_pred HHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhcccc-CCCCC---C-C-ccEEEe
Q 012104 172 KLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF---E-Y-CHIVTT 240 (471)
Q Consensus 172 ~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~---~-~-aDiv~~ 240 (471)
++++.++ .++|+|++. +||+|..++ +++|.++|+++|+++++|++|. .+.+.+. ..++. + . --|++.
T Consensus 152 ~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (389)
T PRK05957 152 AIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYE-YFTYDGVKHFSPGSIPGSGNHTISLY 229 (389)
T ss_pred HHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccch-hccCCCCCccChhhCCCccCcEEEEe
Confidence 9999886 478888754 789999988 7788899999999999999997 6655432 11221 1 1 228899
Q ss_pred CCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHH
Q 012104 241 TTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQV 318 (471)
Q Consensus 241 s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~ 318 (471)
|++|.+ +|.|.|++++++ ++.+++.........+.+...+.++ ..++..- ...+++..+++
T Consensus 230 S~SK~~g~~GlRiG~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~ 292 (389)
T PRK05957 230 SLSKAYGFASWRIGYMVIPI---------------HLLEAIKKIQDTILICPPVVSQYAA-LGALQVG-KSYCQQHLPEI 292 (389)
T ss_pred cchhhccCccceeEEEecCH---------------HHHHHHHHHHhhcccCCCcHHHHHH-HHHHhCC-hHHHHHHHHHH
Confidence 999995 788999999876 4555554433222222333333322 2344321 12457777788
Q ss_pred HHHHHHHHHHHHcC-Cc-eEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCC
Q 012104 319 KANAVALGNYLTGK-GY-SLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAM 395 (471)
Q Consensus 319 ~~na~~l~~~L~~~-g~-~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 395 (471)
.++++.+.+.|++. |+ .+ ..+..+.++|+++.+ +++..++.+.| ++.||.+.++..++.. ..+++||++...
T Consensus 293 ~~~r~~l~~~L~~~~~~~~~-~~~~gg~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~~~ 367 (389)
T PRK05957 293 AQVRQILLKSLGQLQDRCTL-HPANGAFYCFLKVNT-DLNDFELVKQLIREYRVAVIPGTTFGMK---NGCYLRIAYGAL 367 (389)
T ss_pred HHHHHHHHHHHHhcCCCccc-cCCCeeEEEEEeCCC-CCChHHHHHHHHHHCCEEEccchhhCCC---CCCEEEEEEecC
Confidence 88888999999876 43 43 334456778898853 67777776665 5799999988655321 246899998543
Q ss_pred CCcCCCHHHHHHHHHHHHHHH
Q 012104 396 TSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 396 t~~g~~~~d~~~l~~~i~~~l 416 (471)
. ++++++..+.|.+.+
T Consensus 368 ~-----~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 368 Q-----KATAKEGIERLVQGL 383 (389)
T ss_pred C-----HHHHHHHHHHHHHHH
Confidence 2 445555555544443
No 47
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=1.1e-24 Score=221.04 Aligned_cols=357 Identities=15% Similarity=0.121 Sum_probs=230.8
Q ss_pred ccccccChHHHHHHHHHHHhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHH
Q 012104 10 SSLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRAL 87 (471)
Q Consensus 10 ~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~ 87 (471)
+++.+..+.++..+.... .+...++|..+++. .++.+++++.+.+.... .+|+. ......+++...+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~~a~~l~ 81 (386)
T PRK09082 10 SKLPNVGTTIFTVMSALA-AEHGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP------MTGVAALREAIAAKTA 81 (386)
T ss_pred hHhhccCccHHHHHHHHH-hhCCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCcHHHHHHHHHHHH
Confidence 445555555665555433 23456888766543 35788888877664322 22322 1222344444557777
Q ss_pred HhcCCCCCCCceeeec-CChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC
Q 012104 88 QTFHLDPTQWGVNVQP-YSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG 166 (471)
Q Consensus 88 ~lfg~~~~~~~~~v~~-~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~ 166 (471)
+.+|.+.+.- .+|.. .++++|+..++.++++|||+|++.+|.|+++.. .+...| .+++.++++++++
T Consensus 82 ~~~~~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~ 149 (386)
T PRK09082 82 RLYGRQYDAD-SEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP---------AIELAG--GRAVRVALQPPDF 149 (386)
T ss_pred HHhCCCCCCC-CcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH---------HHHHcC--CEEEEEecCcccc
Confidence 8888754210 12444 455689999999999999999999999887642 122334 4566666665568
Q ss_pred CCCHHHHHHHhhhCCCcEEEEc--CCCCCccc---cHHHHHHHHHHhCCEEEEeccccchhhcccc-CCCCC--C---Cc
Q 012104 167 YIDYDKLEEKALDFRPKLIICG--GSAYPRDW---DYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF--E---YC 235 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~--~s~~g~~~---d~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~--~---~a 235 (471)
.+|++++++.+.. ++++|++. +||+|..+ ++++|.++|+++|+++|+|++|. .+.+.+. .++.. . .-
T Consensus 150 ~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~-~~~~~~~~~~s~~~~~~~~~~ 227 (386)
T PRK09082 150 RVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYE-HIVFDGAGHASVLRHPELRER 227 (386)
T ss_pred cCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhh-hhccCCCCCCChhhCcCccCc
Confidence 8999999998864 68888754 78999875 45677899999999999999996 5665432 22222 1 12
Q ss_pred cEEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 236 HIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 236 Div~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
.+++.|++|++ +|.|.||+++++ ++.+.+.+.......+.+...+. +++..+.. ....+++
T Consensus 228 ~i~~~S~SK~~~~~G~RiG~iv~~~---------------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~-~~~~~~~ 290 (386)
T PRK09082 228 AFVVSSFGKTYHVTGWKVGYCVAPA---------------ALSAEFRKVHQYNTFTVNTPAQL-ALADYLRA-EPEHYLE 290 (386)
T ss_pred EEEEeechhhccchhhhhhhhhCCH---------------HHHHHHHHHHhhhcCCCChHHHH-HHHHHHhC-ChHHHHH
Confidence 38899999995 788999999886 44444443221111122222332 33334432 2335566
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccC-CCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP-LGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~-~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
..+.+.++.+.+.+.|++.|+.+. .+..+.++|++++. .+.+..++.+. ++++||.+.++..++.. +...+++||+
T Consensus 291 ~~~~~~~~~~~~~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~-~~~~~~~Ri~ 368 (386)
T PRK09082 291 LPAFYQAKRDRFRAALANSRFKLL-PCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYAD-PFPHRLVRLC 368 (386)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCC-CCCCCEEEEE
Confidence 777788899999999998888774 34567788998863 35677777654 58999999988755421 2235789999
Q ss_pred cCCCCCcCCCHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
+.. .++++++..+.|.
T Consensus 369 ~~~------~~~~l~~~~~rl~ 384 (386)
T PRK09082 369 FAK------QEETLDAAAERLC 384 (386)
T ss_pred ecC------CHHHHHHHHHHHh
Confidence 832 2556665555543
No 48
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=220.27 Aligned_cols=338 Identities=15% Similarity=0.125 Sum_probs=216.2
Q ss_pred cCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee-cCChH
Q 012104 31 CRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ-PYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~-~~sGt 107 (471)
.+.|+|..+++.. ++.+++++...+..... +| +.......+++...+++.+.+|..... .+|. +.+++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWT-HY------TPNAGIPELREAIAEYYKKFYGVDVDV--DNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-CC------CCCCCcHHHHHHHHHHHHHHhCCCCCc--ccEEEeCChH
Confidence 4568887777543 57788888766543221 22 112223455544445565556643221 1333 44556
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||+|++.+|+|.++.. .+...| .+++.++++++ ++.+|++++++.+.. ++++|+
T Consensus 104 ~al~~~~~~l~~~g~~Vlv~~p~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~~~v~ 171 (391)
T PRK08361 104 EATYLAFESLLEEGDEVIIPDPAFVCYVE---------DAKIAE--AKPIRIPLREENEFQPDPDELLELITK-RTRMIV 171 (391)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHH---------HHHHcC--CEEEEEecCCccCCCCCHHHHHHhccc-ccEEEE
Confidence 79999999999999999999999877542 122334 35566666644 467999999998864 678776
Q ss_pred E-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC-C---CccEEEeCCCCcC--CCCCeEEEE
Q 012104 187 C-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E---YCHIVTTTTHKSL--RGPRAGMIF 255 (471)
Q Consensus 187 ~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~-~---~aDiv~~s~~K~l--~GprgG~i~ 255 (471)
+ + +||+|..+| +++|.++|+++++++++|++|. .+.+.+....++ . ..++++.|+||++ +|.|.||++
T Consensus 172 i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 172 INYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 4 3 789999999 6778888999999999999996 554433211122 1 2358899999995 677889999
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHcC-C
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST-PAFKAYAKQVKANAVALGNYLTGK-G 333 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~-~~~~~~~~~~~~na~~l~~~L~~~-g 333 (471)
+++ ++.+.+.........+.+...+ .+...++..-.. ..+++..+++.++.+.+.+.|++. |
T Consensus 251 ~~~---------------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 314 (391)
T PRK08361 251 APE---------------QVIKDMIKLHAYIIGNVASFVQ-IAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPH 314 (391)
T ss_pred cCH---------------HHHHHHHHHHhhhccCCChHHH-HHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 976 3444443221111112222222 222334433111 234666777788888899999886 7
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.+. .+.++.++|+++.+.+++..++...| +++||.+.++..++.. ..+++||++.. .++++++..+.|
T Consensus 315 ~~~~-~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~~------~~~~l~~al~~l 384 (391)
T PRK08361 315 IKVF-EPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKA---GEGYIRISYAT------SKEKLIEAMERM 384 (391)
T ss_pred Ceec-CCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCC---CCCEEEEEecC------CHHHHHHHHHHH
Confidence 7764 44556778988875567778876655 5789999987655422 24789999842 255666666666
Q ss_pred HHHH
Q 012104 413 HRAV 416 (471)
Q Consensus 413 ~~~l 416 (471)
.+++
T Consensus 385 ~~~l 388 (391)
T PRK08361 385 EKAL 388 (391)
T ss_pred HHHH
Confidence 5554
No 49
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=1.2e-24 Score=221.74 Aligned_cols=334 Identities=18% Similarity=0.156 Sum_probs=221.5
Q ss_pred CCeeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 32 RGIELIASE--NF-TSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 32 ~~i~li~s~--n~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
+.|+|..++ .+ .+|.+++++...+.. +..++++.++..|. +..+.+ ++++++++|.+. .|.+++|+
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~~l~~~l----~~~la~~~g~~~-----~i~~tsG~ 112 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDS-HGFGMASVRFICGTQDLHKEL----EEKLAKFLGTED-----AILYSSCF 112 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHH-cCCCCcccccccCCcHHHHHH----HHHHHHHhCCCc-----EEEEcChH
Confidence 346776543 33 578889888777644 33355555555554 233333 467888889763 46678899
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---C--CC
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---F--RP 182 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~--~p 182 (471)
+|+..++.++++|||.|++.+|.|+++.. .+...+. +++.++ .+|++++++.++. . ++
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~---------~~~~~~~--~~~~~~------~~d~~~l~~~i~~~~~~~~~~ 175 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIID---------GVRLCKA--KRYRYA------NNDMADLEAQLKEAKEAGARH 175 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHH---------HHHhcCC--ceEEeC------CCCHHHHHHHHHhhhccCCCC
Confidence 99999999999999999999998876532 1222232 233331 2689999988864 2 56
Q ss_pred cEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc-CC--CCC-CCccEEEeCCCCcCCCCCeEEEE
Q 012104 183 KLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE-AA--NPF-EYCHIVTTTTHKSLRGPRAGMIF 255 (471)
Q Consensus 183 klIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~-~~--~p~-~~aDiv~~s~~K~l~GprgG~i~ 255 (471)
++|+++ .+++|...++++|.++|+++|++|++|++|..|+... +. .+ ..+ +..|++++|+||++.|+|+||++
T Consensus 176 ~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~ 255 (397)
T PRK06939 176 KLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTA 255 (397)
T ss_pred eEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEE
Confidence 778775 5778888899999999999999999999997664321 11 00 012 24689999999999889999999
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
+++ ++.+.+.....+.. .+++....+++...+++.+. ..++..+++.++.+.+.+.|++.|+
T Consensus 256 ~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~ 318 (397)
T PRK06939 256 GRK---------------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAAGF 318 (397)
T ss_pred eCH---------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 886 45555543322222 23334444444445565542 2356677888899999999998888
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
++.. +. ..++++.+. .+.+..++.+.|.+.||.+.+...+. .+....++|++++... +++++++..+.|.+
T Consensus 319 ~~~~-~~-~~~~~~~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~--~~~~~~~iRi~~~~~~----~~~~i~~~l~~L~~ 389 (397)
T PRK06939 319 TLGP-GE-HPIIPVMLG-DAKLAQEFADRLLEEGVYVIGFSFPV--VPKGQARIRTQMSAAH----TKEQLDRAIDAFEK 389 (397)
T ss_pred CcCC-CC-CCEEEEEEC-CHHHHHHHHHHHHHCCceEeeeCCCC--CCCCCceEEEEECCCC----CHHHHHHHHHHHHH
Confidence 7643 22 233333332 22345678777777799988543221 1122468999986543 47899999999988
Q ss_pred HHHH
Q 012104 415 AVTL 418 (471)
Q Consensus 415 ~l~~ 418 (471)
+++.
T Consensus 390 ~~~~ 393 (397)
T PRK06939 390 VGKE 393 (397)
T ss_pred HHHH
Confidence 7754
No 50
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=2.6e-24 Score=217.84 Aligned_cols=339 Identities=15% Similarity=0.106 Sum_probs=220.7
Q ss_pred cCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC-hH
Q 012104 31 CRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS-GS 107 (471)
Q Consensus 31 ~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s-Gt 107 (471)
...|+|..+++.. ++.+.+++...+.+.+ .+|+. ......+.+...+++.+.+|.+.+.- -+|..++ ++
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~g~~~~~~-~~i~~t~G~~ 91 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGY-TSYTA------NAGLLELRQEIAKYLKKRFAVSYDPN-DEIIVTVGAS 91 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChH
Confidence 4678998887643 5567787766554322 23322 12233454444566666666532110 1244444 56
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+.+++.++++|||+|++.+|+|+++.. .+...|. +++.++++. +++.+|++++++++.. ++++|+
T Consensus 92 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~ 159 (378)
T PRK07682 92 QALDVAMRAIINPGDEVLIVEPSFVSYAP---------LVTLAGG--VPVPVATTLENEFKVQPAQIEAAITA-KTKAIL 159 (378)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCchhhHH---------HHHHcCC--EEEEeecCCccCCCCCHHHHHhhcCc-ccEEEE
Confidence 89999999999999999999999876532 1222343 445555543 3578999999998864 688775
Q ss_pred -Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC---CccEEEeCCCCcC--CCCCeEEE
Q 012104 187 -CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE---YCHIVTTTTHKSL--RGPRAGMI 254 (471)
Q Consensus 187 -~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~---~aDiv~~s~~K~l--~GprgG~i 254 (471)
++ +||+|..++ +++|.++|+++|+++++|++|. .+.+.+...+ .+. .-.+++.|++|++ +|.|.||+
T Consensus 160 ~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~ 238 (378)
T PRK07682 160 LCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYA-ELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFI 238 (378)
T ss_pred EECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhh
Confidence 55 789999886 5677888999999999999997 6665443211 111 2248899999994 68899999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
++++ ++.+.+.........+.+...+ .+...+++.. ..+.++..+.+.++++.+.+.|++.|+
T Consensus 239 ~~~~---------------~~i~~l~~~~~~~~~~~~~~~q-~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~ 301 (378)
T PRK07682 239 AAPV---------------YFSEAMLKIHQYSMMCAPTMAQ-FAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEIGL 301 (378)
T ss_pred hcCH---------------HHHHHHHHHHHhhccCCCHHHH-HHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9987 4555444322111122333323 3333445432 234566777788889999999998888
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
.+. .+.+++++|+++.+.+++..++.+. ++++||.+.++..++. ...+++||++.. .++++++..+.|.
T Consensus 302 ~~~-~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~---~~~~~iRis~~~------~~~~l~~~l~~l~ 371 (378)
T PRK07682 302 TCH-VPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE---SGEGFIRCSYAT------SLEQLQEAMKRMK 371 (378)
T ss_pred ccC-CCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc---CCCCeEEEEeCC------CHHHHHHHHHHHH
Confidence 764 3456778888876556677777655 5688999998865542 125799999842 2567777777766
Q ss_pred HHHH
Q 012104 414 RAVT 417 (471)
Q Consensus 414 ~~l~ 417 (471)
++++
T Consensus 372 ~~l~ 375 (378)
T PRK07682 372 RFVE 375 (378)
T ss_pred HHHh
Confidence 6554
No 51
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.8e-24 Score=216.94 Aligned_cols=360 Identities=13% Similarity=0.079 Sum_probs=223.2
Q ss_pred cccccccccccChHHHHHHHHHHHhccCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHH
Q 012104 5 NEWGNSSLETVDPEIHDLIEKEKRRQCRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLC 82 (471)
Q Consensus 5 ~~~~~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~ 82 (471)
+.++++.+....+.+...+....+...+.++|..+++.. ++.+++++.+.+.+.. ..|+. ......+.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~i 75 (384)
T PRK06348 3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD------SGGDVELIEEI 75 (384)
T ss_pred chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHH
Confidence 345555565566666555554443334678887766543 4666665544332221 12222 22223444444
Q ss_pred HHHHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
.+++.+.+|...+. -+|..++| ++|+..++.++++|||+|++.+|.|+++... +...|. +++++++
T Consensus 76 a~~~~~~~~~~~~~--~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~---------~~~~g~--~~~~~~~ 142 (384)
T PRK06348 76 IKYYSKNYDLSFKR--NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQ---------IEMVGG--KPIILET 142 (384)
T ss_pred HHHHHHHhCCCCCh--hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHH---------HHHcCC--EEEEecC
Confidence 45565555543221 23444454 5799999999999999999999999876531 223343 4455554
Q ss_pred cC-CCCCCCHHHHHHHhhhCCCcEEEE-c-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC
Q 012104 162 NS-STGYIDYDKLEEKALDFRPKLIIC-G-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE 233 (471)
Q Consensus 162 ~~-~~~~iD~~~le~~~~~~~pklIi~-~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~ 233 (471)
++ +++.+|++++++.+. .++++|++ + +||+|..++. ++|.++|+++|++|++|++|. ++.+.+..++ .+.
T Consensus 143 ~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~ 220 (384)
T PRK06348 143 YEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYD-GFSFYEDFVPMATLA 220 (384)
T ss_pred CcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccc-cceeCCCccchhhcC
Confidence 32 456799999999886 47887774 4 7899999875 566778999999999999997 6665432221 122
Q ss_pred ---CccEEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhcc
Q 012104 234 ---YCHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAST 308 (471)
Q Consensus 234 ---~aDiv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~ 308 (471)
.-.|++.|++|+ ++|.|.||+++++ ++.+.+.........+.+...+ .+.+.++.. ..
T Consensus 221 ~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~---------------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~-~~ 283 (384)
T PRK06348 221 GMPERTITFGSFSKDFAMTGWRIGYVIAPD---------------YIIETAKIINEGICFSAPTISQ-RAAIYALKH-RD 283 (384)
T ss_pred CCcCcEEEEecchhccCCccccceeeecCH---------------HHHHHHHHHHHhccCCCCHHHH-HHHHHHHhC-cH
Confidence 123889999999 4789999999986 4555554332211122222222 233334543 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCC
Q 012104 309 PAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPG 386 (471)
Q Consensus 309 ~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~ 386 (471)
...++..+.+.++++.+.+.|++. |+.+. .+.++.++|++++..+++..++.+. ++++||.+.++..++.. ..+
T Consensus 284 ~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~---~~~ 359 (384)
T PRK06348 284 TIVPLIKEEFQKRLEYAYKRIESIPNLSLH-PPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGES---GEG 359 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccC---CCC
Confidence 234566666777788889999876 66653 4456778899986556677777655 46789999988766432 257
Q ss_pred eeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 387 GVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 387 ~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
++||++. . .++++++..+.|.
T Consensus 360 ~iRi~~~--~----~~~~l~~al~~l~ 380 (384)
T PRK06348 360 YIRLACT--V----GIEVLEEAFNRIE 380 (384)
T ss_pred eEEEEec--C----CHHHHHHHHHHHH
Confidence 9999983 2 2455555555443
No 52
>PRK07777 aminotransferase; Validated
Probab=99.94 E-value=6.9e-24 Score=215.36 Aligned_cols=358 Identities=16% Similarity=0.123 Sum_probs=224.6
Q ss_pred ccccChHHHHHHHHHHHhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHh
Q 012104 12 LETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQT 89 (471)
Q Consensus 12 ~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~l 89 (471)
+.++.+++...+.+..+. ...++|..+... .++.+++++...+.... .+|+ .......+++.+.+++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~------~~~g~~~lr~~ia~~~~~~ 77 (387)
T PRK07777 6 LRPFGTTIFAEMSALAVR-TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYP------PGPGIPELRAAIAAQRRRR 77 (387)
T ss_pred hhhcCccHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCC------CCCCCHHHHHHHHHHHHHH
Confidence 445555555555544432 366888654422 25567777665554321 1222 1222334554445666677
Q ss_pred cCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC--CCC
Q 012104 90 FHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS--TGY 167 (471)
Q Consensus 90 fg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~--~~~ 167 (471)
+|.+...-.-.+.+.+|++|+.+++.++++|||+|++..|.|+++.. .+...|. +.+.++++++ ++.
T Consensus 78 ~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~ 146 (387)
T PRK07777 78 YGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAA---------VIAMAGA--HRVPVPLVPDGRGFA 146 (387)
T ss_pred hCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHCCC--EEEEeecCCccCCCc
Confidence 78754220012345556789999999999999999999998876531 1223343 4445555543 467
Q ss_pred CCHHHHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC------CCcc
Q 012104 168 IDYDKLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF------EYCH 236 (471)
Q Consensus 168 iD~~~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~------~~aD 236 (471)
+|++++++.+.. ++++|++. +||+|..++ +++|.++|+++|+++|+|++|. ++.+.+..+.++ ...+
T Consensus 147 ~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 147 LDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYE-HLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred CCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccch-hcccCCCCcccHhhCCCCcCcE
Confidence 999999998864 68888754 788998876 6677899999999999999996 666543322222 1246
Q ss_pred EEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 237 IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 237 iv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
+++.|+||++ +|.|.|++++++ ++.+.+.........+.+...+ .+++.++... ....++.
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~---------------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~ 287 (387)
T PRK07777 225 VTISSAAKTFNVTGWKIGWACGPA---------------PLIAAVRAAKQYLTYVGGAPFQ-PAVAHALDHE-DAWVAAL 287 (387)
T ss_pred EEEeechhhccCcCceeEEEecCH---------------HHHHHHHHHHhhcccCCCCHHH-HHHHHHHhCC-cHHHHHH
Confidence 8999999995 688999999876 4444443321111111122222 2233344332 3345667
Q ss_pred HHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCC-CCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 315 AKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLG-LTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~-~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
.+.+.++++.+.+.|++.|+++. .+.+++++|+++++.+ .++.++.+.| +++||.|.++..++...+...+++||++
T Consensus 288 ~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~ 366 (387)
T PRK07777 288 RDSLQAKRDRLAAGLAEAGFEVH-DSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF 366 (387)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcc-CCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe
Confidence 77888899999999998888764 3456778888875322 3667776666 6789999988765432222357899998
Q ss_pred CCCCCcCCCHHHHHHHHHHHHH
Q 012104 393 PAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 393 ~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.. .++++++..+.|.+
T Consensus 367 ~~------~~~~l~~~l~~l~~ 382 (387)
T PRK07777 367 CK------RDDTLDEAIRRLRA 382 (387)
T ss_pred cC------CHHHHHHHHHHHHH
Confidence 32 25666666665554
No 53
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=9.7e-24 Score=214.02 Aligned_cols=322 Identities=16% Similarity=0.074 Sum_probs=211.0
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG- 106 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG- 106 (471)
.++.++|..+++. .++.+.+++.+.+.+....+|+.. .....+.+...+++.+.+|.+...- -+|..++|
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~~ia~~~~~~~~~~~~~~-~~vi~t~G~ 100 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSY------EGMLAYRQAVADWYKRRFGVELDPE-TEVLSLIGS 100 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCC------CCCHHHHHHHHHHHHHhhCCCCCCC-CeEEECCCc
Confidence 3566888776644 467888888776543211233321 1123444444466666666642210 13555555
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEE
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklI 185 (471)
++++..++.++++|||+|++.+|+|+++.. .....| .+++.++++++ ++.+|++++++.+. .++|+|
T Consensus 101 ~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~G--~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v 168 (383)
T TIGR03540 101 KEGIAHIPLAFVNPGDIVLVPDPGYPVYRI---------GTLFAG--GEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLM 168 (383)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCcchHH---------HHHhcC--CEEEEEecCcccCCccCHHHHHhhcc-ccceEE
Confidence 579999999999999999999999987642 122334 35566666644 45689999998876 478988
Q ss_pred EEc--CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCC---CCC---ccEEEeCCCCcC--CCCCeE
Q 012104 186 ICG--GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FEY---CHIVTTTTHKSL--RGPRAG 252 (471)
Q Consensus 186 i~~--~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p---~~~---aDiv~~s~~K~l--~GprgG 252 (471)
+++ +||+|..++. ++|.++|+++|++|++|++|. .+.+.+..+.+ +.. -.|++.|++|++ +|.|.|
T Consensus 169 ~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG 247 (383)
T TIGR03540 169 FINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIG 247 (383)
T ss_pred EEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceee
Confidence 744 7899999984 677788999999999999997 55554422212 221 237789999995 688999
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
|+++++ ++.+++........ .+++.....+.+.++... ....++..+++.++++.+.+.|++.
T Consensus 248 ~~i~~~---------------~l~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (383)
T TIGR03540 248 MAVGNA---------------DLIAGLGKVKTNVD-SGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI 310 (383)
T ss_pred EEeCCH---------------HHHHHHHHHHHhcc-cCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999876 45555543221111 122222233334445432 3345667777788899999999998
Q ss_pred CceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEecC
Q 012104 333 GYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIGTP 393 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~ 393 (471)
|+.+. .+.++.++|+++.+ +++..++.+. +++.||.+.++..++.. ..+++||++.
T Consensus 311 ~~~~~-~~~~~~~~~~~l~~-~~~~~~~~~~ll~~~gi~v~~g~~f~~~---~~~~~Ris~~ 367 (383)
T TIGR03540 311 GIDVE-KPKATFYVWVPVPE-GYTSAEFAARLLEETGVVVTPGVGFGEY---GEGYIRISLT 367 (383)
T ss_pred CCEec-CCCcceEEEEECCC-CCCHHHHHHHHHHHCCEEEecchhhCcc---CCCeEEEEec
Confidence 98875 34557778998854 6677777655 57899999987655321 2468999983
No 54
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.94 E-value=1.4e-24 Score=218.13 Aligned_cols=328 Identities=18% Similarity=0.146 Sum_probs=218.7
Q ss_pred cCCeeEecCCCC---CcHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 31 CRGIELIASENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 31 ~~~i~li~s~n~---~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
+..|+|..++++ .+|.+++++...+. +|..++++.++..|. .....+ ++.++++++.+. .+.+++|
T Consensus 16 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~l----~~~la~~~~~~~-----~i~~~~G 85 (360)
T TIGR00858 16 RRLLNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEEL----EEELAEWKGTEA-----ALLFSSG 85 (360)
T ss_pred ceEEecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHHH----HHHHHHHhCCCC-----EEEECch
Confidence 346778776431 35899999987763 444555544433332 333333 367788888643 5677889
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC---CCc
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RPK 183 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~---~pk 183 (471)
+.++..++.++++|||+|++.++.|+.+.. .+...|. +++.++ .+|++.+++.++.. +++
T Consensus 86 ~~~~~~~l~~~~~~gd~v~~~~~~~~~~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~~~~~~~~~~~ 148 (360)
T TIGR00858 86 YLANVGVISALVGKGDLILSDALNHASLID---------GCRLSGA--RVRRYR------HNDVEHLERLLEKNRGERRK 148 (360)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHH---------HHHhcCC--ceEEec------CCCHHHHHHHHHHcccCCCe
Confidence 988888888889999999999988765532 1223333 233321 36899999988753 467
Q ss_pred EEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccc-c--CC-CCCC--CccEEEeCCCCcCCCCCeEEEE
Q 012104 184 LIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ-E--AA-NPFE--YCHIVTTTTHKSLRGPRAGMIF 255 (471)
Q Consensus 184 lIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g-~--~~-~p~~--~aDiv~~s~~K~l~GprgG~i~ 255 (471)
+|+++ .+++|...|+++|.++|+++|++|++|++|..|..... . .+ ..+. ..+|+++|+||++ |++||+++
T Consensus 149 ~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~ 227 (360)
T TIGR00858 149 LIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVA 227 (360)
T ss_pred EEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEE
Confidence 77765 46788889999999999999999999999975533211 1 00 1121 4679999999998 55789998
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
+++ ++.+.+.....+. ..++++...+++...+++... ..++..+++.++.+++.+.|++.|+
T Consensus 228 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~ 290 (360)
T TIGR00858 228 GSQ---------------ALIDYLINRARTLIFSTALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEALGF 290 (360)
T ss_pred cCH---------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 876 4555554322222 223344555555555665432 2345678888999999999998888
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
++.. ..+.++|+.+.. ..+..++.+.|.++||.+.+...++.. ...+++||+++..++ ++|++++.+.|
T Consensus 291 ~~~~--~~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~~--~~~~~iRis~~~~~~----~~~i~~~l~~l 359 (360)
T TIGR00858 291 TLMP--SCTPIVPVIIGD-NASALALAEELQQQGIFVGAIRPPTVP--AGTSRLRLTLSAAHT----PGDIDRLAEAL 359 (360)
T ss_pred ccCC--CCCCEEEEEeCC-HHHHHHHHHHHHHCCeeEeeeCCCCCC--CCCceEEEEEcCCCC----HHHHHHHHHhh
Confidence 7642 234577777643 234667888888999999875444321 124689999866544 78999988876
No 55
>PRK08912 hypothetical protein; Provisional
Probab=99.94 E-value=5.4e-24 Score=216.13 Aligned_cols=359 Identities=15% Similarity=0.103 Sum_probs=224.4
Q ss_pred cccccChHHHHHHHHHHHhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 012104 11 SLETVDPEIHDLIEKEKRRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQ 88 (471)
Q Consensus 11 ~~~~~d~~~~~~~~~e~~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~ 88 (471)
.+....+..+..+..... ....++|..+... .++.+.+++...+.+.. .+|+. ......+.+...+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~~~~ 78 (387)
T PRK08912 7 VFADLPTTIFEVMSQLAR-EHGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP------MMGLPELRQAVAAHYAR 78 (387)
T ss_pred HHhhCCCCHHHHHHHHHh-hCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCcHHHHHHHHHHHHH
Confidence 344445555555544332 2456777654422 35677777665543321 12332 22223444444556666
Q ss_pred hcCCCCCCCceeee-cCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCC
Q 012104 89 TFHLDPTQWGVNVQ-PYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGY 167 (471)
Q Consensus 89 lfg~~~~~~~~~v~-~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~ 167 (471)
.+|.+.+.. .+|. ++++++|+.+++.++++|||+|++.+|.|+++.. .+...| .+++.++++++++.
T Consensus 79 ~~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~ 146 (387)
T PRK08912 79 FQGLDLDPE-TEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP---------LIRRAG--GVPRLVRLEPPHWR 146 (387)
T ss_pred HhCCCCCCc-ccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHcC--CEEEEEecCcccCc
Confidence 667543221 1344 4555689999999999999999999999876642 122334 35556666655678
Q ss_pred CCHHHHHHHhhhCCCcEEEEc--CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhcccc-CCCC--CC---Ccc
Q 012104 168 IDYDKLEEKALDFRPKLIICG--GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQE-AANP--FE---YCH 236 (471)
Q Consensus 168 iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p--~~---~aD 236 (471)
+|++++++.+.. ++|+|++. +||+|..++. ++|.++|+++|+++|+|++|. .+.+.+. .++. +. ..+
T Consensus 147 ~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 147 LPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred CCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCce
Confidence 999999998864 67877644 7899999874 557788999999999999997 5555432 1111 11 235
Q ss_pred EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 237 IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 237 iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
++++|++|+ ++|.|.|++++++ ++.+.+.........+.+...+ .+.+.++.. ....+++.
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~q-~~~~~~l~~-~~~~~~~~ 287 (387)
T PRK08912 225 VKIGSAGKIFSLTGWKVGFVCAAP---------------PLLRVLAKAHQFLTFTTPPNLQ-AAVAYGLGK-PDDYFEGM 287 (387)
T ss_pred EEEeechhhccCcCceeEEEecCH---------------HHHHHHHHHHhhccccCChHHH-HHHHHHHhC-CHHHHHHH
Confidence 899999999 5788999999876 4444443322221122222222 233334432 12344667
Q ss_pred HHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC--CCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 315 AKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~--~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
.+++.++.+.+.+.|++.|+.+. .+.+++++|+++.+. ..+..++.+. +++.||.+.++..++...+ ..+++||+
T Consensus 288 ~~~~~~~~~~l~~~L~~~g~~~~-~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~-~~~~iRl~ 365 (387)
T PRK08912 288 RADLARSRDRLAAGLRRIGFPVL-PSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDP-VTSVVRFC 365 (387)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-CCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCC-CCCEEEEE
Confidence 77788889999999998888774 445677889988642 2466666555 5788999998765532211 35799999
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+.. .++.+++..+.|.+.+
T Consensus 366 ~~~------~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 366 FAK------RDATLDEAVERLAAAR 384 (387)
T ss_pred EeC------CHHHHHHHHHHHHHHH
Confidence 842 2556666665555544
No 56
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=6.7e-24 Score=215.12 Aligned_cols=336 Identities=14% Similarity=0.062 Sum_probs=218.9
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC--CCCCCCceeeecCC
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQPYS 105 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg--~~~~~~~~~v~~~s 105 (471)
..+.++|..+++. +++.+.+++...+.+.. .+|+. ......+.+...+++.+.+| ++.+. .+.+++
T Consensus 23 ~~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~la~~~~~~~~~~~~~~~---i~~t~g 92 (382)
T PRK06108 23 REGVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH------NLGIPELREALARYVSRLHGVATPPER---IAVTSS 92 (382)
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCcCcce---EEEeCC
Confidence 3467899888754 36789999877664421 12322 12223444445567777778 44431 233455
Q ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC--CCCCCCHHHHHHHhhhCCCc
Q 012104 106 GSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS--STGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 106 Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~--~~~~iD~~~le~~~~~~~pk 183 (471)
+++|+..++.++++|||+|++.+|+|+.+.. .+...|. +++.++.+. .++.+|++++++.+. .+++
T Consensus 93 ~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~ 160 (382)
T PRK06108 93 GVQALMLAAQALVGPGDEVVAVTPLWPNLVA---------APKILGA--RVVCVPLDFGGGGWTLDLDRLLAAIT-PRTR 160 (382)
T ss_pred hHHHHHHHHHHhcCCCCEEEEeCCCccchHH---------HHHHCCC--EEEEeeCCCCCCCccCCHHHHHHhcC-ccce
Confidence 6789999999999999999999999876532 1223343 445555553 346799999999885 3688
Q ss_pred EEEE-c-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhcc-c-cCCCCCC-----CccEEEeCCCCcC--CCC
Q 012104 184 LIIC-G-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAA-Q-EAANPFE-----YCHIVTTTTHKSL--RGP 249 (471)
Q Consensus 184 lIi~-~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~-g-~~~~p~~-----~aDiv~~s~~K~l--~Gp 249 (471)
+|++ + +||+|..++. ++|.++|+++|+++++|++|. ++.+. + ..++.+. ...+++.|+||++ +|.
T Consensus 161 ~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 239 (382)
T PRK06108 161 ALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW 239 (382)
T ss_pred EEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc
Confidence 7764 4 6899988864 667788999999999999997 55543 2 2222121 1238899999984 788
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
|.|++++++ ++.+.+.........+.+... ..+...++... ...+++..+++.++.+.+.+.|
T Consensus 240 RiG~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~-q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 302 (382)
T PRK06108 240 RLGWLVAPP---------------ALGQVLEKLIEYNTSCVAQFV-QRAAVAALDEG-EDFVAELVARLRRSRDHLVDAL 302 (382)
T ss_pred ceeeeeCCH---------------HHHHHHHHHHHhcccCCChHH-HHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 999999976 445544433211112222222 23333345432 2345677778888888999999
Q ss_pred HcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 330 TGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 330 ~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
++. |+.+. .+.++.++|+++.+ ..+..++.+. ++++||.+.++..++. ...+++||++.. +++++++
T Consensus 303 ~~~~~~~~~-~p~~g~~~~~~l~~-~~~~~~~~~~ll~~~gV~v~pg~~f~~---~~~~~~Ris~~~------~~~~l~~ 371 (382)
T PRK06108 303 RALPGVEVA-KPDGAMYAFFRIPG-VTDSLALAKRLVDEAGLGLAPGTAFGP---GGEGFLRWCFAR------DPARLDE 371 (382)
T ss_pred HhCCCCccc-CCCeeEEEEEeCCC-CCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEecC------CHHHHHH
Confidence 876 78775 34556678888754 3456666554 5789999987765431 235799999843 3678887
Q ss_pred HHHHHHHHH
Q 012104 408 IGEFLHRAV 416 (471)
Q Consensus 408 l~~~i~~~l 416 (471)
..+.|.+++
T Consensus 372 ~l~~l~~~l 380 (382)
T PRK06108 372 AVERLRRFL 380 (382)
T ss_pred HHHHHHHHH
Confidence 777776654
No 57
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.4e-24 Score=216.12 Aligned_cols=340 Identities=14% Similarity=0.104 Sum_probs=217.2
Q ss_pred cCCeeEecCC-C--CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCC-CceeeecCCh
Q 012104 31 CRGIELIASE-N--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQ-WGVNVQPYSG 106 (471)
Q Consensus 31 ~~~i~li~s~-n--~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~-~~~~v~~~sG 106 (471)
++.++|..++ + ..++.+++++...+.+....+|+..+ | ...+.+...+++++.+|.+.+. . -.+.+.++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~---G---~~~LR~aia~~l~~~~g~~~~~~~-~I~it~Ga 111 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYR---G---DADIRELLAARLAAFTGAPVDAAD-ELIITPGT 111 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCC---C---CHHHHHHHHHHHHHHhCCCCCCCC-CEEEeCCc
Confidence 3556776544 4 24678888887766433223444321 2 2234444557778888864221 1 12334445
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec---C-CCCCCCHHHHHHHhhhCCC
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN---S-STGYIDYDKLEEKALDFRP 182 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~---~-~~~~iD~~~le~~~~~~~p 182 (471)
++|+..++.++++|||+|++.+|.|+++.. .+...|. ++++++++ + +++.+|+++|++.+.. ++
T Consensus 112 ~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~---------~~~~~g~--~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~ 179 (405)
T PRK06207 112 QGALFLAVAATVARGDKVAIVQPDYFANRK---------LVEFFEG--EMVPVQLDYLSADKRAGLDLDQLEEAFKA-GV 179 (405)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCchhHHH---------HHHHcCC--EEEEEeccccCcccCCCcCHHHHHHhhhh-cC
Confidence 679999999999999999999999987642 1223343 44445443 1 2478999999998864 67
Q ss_pred cEEE-Ec-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CC-cc--EEEeCCCCc--CCCC
Q 012104 183 KLII-CG-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY-CH--IVTTTTHKS--LRGP 249 (471)
Q Consensus 183 klIi-~~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~-aD--iv~~s~~K~--l~Gp 249 (471)
++|+ ++ +||+|..++. ++|.++|+++|++||+|++|. .+++.+..+.++ .. .| +++.|++|+ ++|.
T Consensus 180 k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl 258 (405)
T PRK06207 180 RVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYS-RLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY 258 (405)
T ss_pred eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc
Confidence 8665 54 7899999984 567788899999999999997 666554322122 11 22 889999999 4799
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
|.||+++++ ++.+++.........+.+. ....++..++..- ...+++..++..++++.+.+.|
T Consensus 259 RiG~ii~~~---------------~l~~~~~~~~~~~~~~~~~-~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L 321 (405)
T PRK06207 259 RLGVAFGSP---------------AIIDRMEKLQAIVSLRAAG-YSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVL 321 (405)
T ss_pred ceEEEEcCH---------------HHHHHHHHHHhHhccCCCH-HHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999876 4555554322221122222 2233333444321 1235666777777888888999
Q ss_pred HcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 330 TGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 330 ~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
++. |+.+. .+.++.++|++++..+++..++.+.| +++||.+.++..++.. ..+++||++.. .++++++
T Consensus 322 ~~~~~~~~~-~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~---~~~~~Ris~~~------~~~~l~~ 391 (405)
T PRK06207 322 RGVEGVFVR-APQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPH---TADSIRLNFSQ------DHAAAVA 391 (405)
T ss_pred hcCCCceec-CCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCC---CCCeEEEEecC------CHHHHHH
Confidence 876 77764 34556788999865446777776666 5789999988765421 24799999842 2456655
Q ss_pred HHHHHHHHHH
Q 012104 408 IGEFLHRAVT 417 (471)
Q Consensus 408 l~~~i~~~l~ 417 (471)
-.+.|.++++
T Consensus 392 al~rl~~~l~ 401 (405)
T PRK06207 392 AAERIAQLIE 401 (405)
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 58
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=3.4e-24 Score=216.14 Aligned_cols=328 Identities=16% Similarity=0.131 Sum_probs=210.7
Q ss_pred CCeeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcch---hHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIA--SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNE---FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~--s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~---~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
.+|+|-| ....+..++.+++.. |..|+.+.|+.+|.. +...+++ .++.+++++|++. +.+ ++||
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~----~~i-~~g~ 75 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDE----ARV-THGA 75 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCc----eEE-ECCh
Confidence 4556543 334566777777653 445666666654432 1112222 2355899999986 344 6788
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhh------
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALD------ 179 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~------ 179 (471)
++++.+++.++++|||.|++..++|.+.+. .+...|. +++.++.+. .++.+|++++++.+.+
T Consensus 76 ~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 144 (370)
T TIGR02539 76 REGKFAVMHALCKEGDWVVLDGLAHYTSYV---------AAERAGL--NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESG 144 (370)
T ss_pred HHHHHHHHHHhhCCCCEEEECCcccHHHHH---------HHHHcCC--EEEEEecCCcccCCcCHHHHHHHHHHhhhccC
Confidence 899999999999999999998877654431 1223444 444454442 3578999999999863
Q ss_pred CCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC-C-CccEEEeCCCCcCCC-CCeEEE
Q 012104 180 FRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-YCHIVTTTTHKSLRG-PRAGMI 254 (471)
Q Consensus 180 ~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~-~-~aDiv~~s~~K~l~G-prgG~i 254 (471)
.++++|++. .|++|...|+++|.++|+++|+++++|++|+.|. .+.+. . +.|++++|+||++.+ ++.|++
T Consensus 145 ~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~-----~~~~~~~~~~di~v~s~sK~~~~~g~~G~l 219 (370)
T TIGR02539 145 KPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGR-----MPVSAKEIGADFIVGSGHKSMAASGPCGVL 219 (370)
T ss_pred CCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCC-----cCCCHHHcCCCEEEeeCcccccCCCCEEEE
Confidence 257777743 6789999999999999999999999999998652 22122 2 579999999999753 456999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCC-------CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-------~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~ 327 (471)
+++++ +.+.+.....|. ..+++....+++...++.... +..++ ..+..+++++|++
T Consensus 220 ~~~~~---------------~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~l~~-~~~~~~~~~~l~~ 282 (370)
T TIGR02539 220 GMSEE---------------WEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVV-ERVKR-WDEEVKKTRWFVA 282 (370)
T ss_pred EECHH---------------HHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHH
Confidence 88773 333333221111 011222122333333454321 12222 3344566789999
Q ss_pred HHHcCCceEee-CCCCCeeEEEEccCC-------CCCHHHHHHHHhhcCeE-eccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 328 YLTGKGYSLVT-GGTENHLVLWDLRPL-------GLTGNKVEKLCDLCNIT-VNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 328 ~L~~~g~~i~~-~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~-v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
.|++.|++++. .+..+++++++++.. ..++..+.+.|.+.||. +++ + .++.+|+++.
T Consensus 283 ~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~----~-----~~~~iRis~~----- 348 (370)
T TIGR02539 283 ELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS----G-----QTKYFKLSVY----- 348 (370)
T ss_pred HHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccC----C-----cceEEEEEec-----
Confidence 99999998752 235566777776421 11234688899999996 442 1 1358999962
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~ 417 (471)
+.+++|++++.+.|+++++
T Consensus 349 ~~t~e~i~~l~~~L~~~~~ 367 (370)
T TIGR02539 349 GLTKEQVEYVVDSFEEIVE 367 (370)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 2368999999999988764
No 59
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.5e-24 Score=212.92 Aligned_cols=326 Identities=17% Similarity=0.149 Sum_probs=227.0
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cC
Q 012104 41 NFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LE 119 (471)
Q Consensus 41 n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~ 119 (471)
..+..+.++++..++.+.|... | ++++++| +.+++++|+++ .|.+.|||.|+.+++.+| ++
T Consensus 11 p~i~~~e~~~v~~vl~sg~i~~--G-------~~v~~FE----~~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig 72 (374)
T COG0399 11 PSIGEEELAAVQEVLKSGWLTG--G-------PFVRRFE----QAFAEYLGVKY-----AVAVSSGTAALHLALLALAIG 72 (374)
T ss_pred CCcchHHHHHHHHHHHcCCeec--C-------hHHHHHH----HHHHHHhCCCe-----EEEecChHHHHHHHHHhcCCC
Confidence 3356677788888887766421 2 5667787 57889999998 366789999999999987 79
Q ss_pred CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHH
Q 012104 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYA 199 (471)
Q Consensus 120 pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~ 199 (471)
|||+|++++.++....+ .+...| .+++.+++|++++.||++.||+.+.+ ++|.|+.. .-+|...|++
T Consensus 73 ~GDeVI~ps~TfvATan---------~i~~~G--a~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~ 139 (374)
T COG0399 73 PGDEVIVPSFTFVATAN---------AVLLVG--AKPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMD 139 (374)
T ss_pred CCCEEEecCCchHHHHH---------HHHHcC--CeEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHH
Confidence 99999999988754321 222334 58888999999999999999999974 69988754 3478889999
Q ss_pred HHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHh
Q 012104 200 RFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFED 277 (471)
Q Consensus 200 ~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~ 277 (471)
.|.+||++||++||+|+||+.|..+.|..... ..|+.++||| |.|+...||+++++++ ++.+
T Consensus 140 ~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt--~Gd~~~fSF~~~K~ittgEGGav~tnd~--------------ela~ 203 (374)
T COG0399 140 AIMALAKRHGLPVIEDAAQAHGATYKGKKVGS--FGDIGAFSFHATKNLTTGEGGAVVTNDE--------------ELAE 203 (374)
T ss_pred HHHHHHHHcCCeEEEEcchhccCeecCccccc--ccceEEEEecCCCCccccCceEEEeCCH--------------HHHH
Confidence 99999999999999999999999888765433 4577777777 8887779999999986 6776
Q ss_pred hhhhcCCCCCCCC---------C-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCC----
Q 012104 278 KINFAVFPSLQGG---------P-HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTE---- 342 (471)
Q Consensus 278 ~i~~~~~~~~~g~---------p-~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~---- 342 (471)
++....+.|.... + .+..+.-+.+|+...+-+.+++..++..++++.+.+.|++. ++.+...+.+
T Consensus 204 k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~ 283 (374)
T COG0399 204 KARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHA 283 (374)
T ss_pred HHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceee
Confidence 6654333332110 0 01111122222222223356788888899999999999976 4544332222
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCC------------------CCCCeeEEecCCCCCcCCCHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSA------------------LAPGGVRIGTPAMTSRGLLEKD 404 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~------------------~~~~~iRig~~~~t~~g~~~~d 404 (471)
-|+..+.+.+.+++.+.+.+.|++.||.......|-+..+ .....++|.+ .-+++++|
T Consensus 284 ~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~----~p~l~~~~ 359 (374)
T COG0399 284 WHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL----HPNLSEED 359 (374)
T ss_pred eeeeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC----CCCCCHHH
Confidence 3444555554467888999999999877333223321110 0012344433 23578999
Q ss_pred HHHHHHHHHHHHH
Q 012104 405 FEQIGEFLHRAVT 417 (471)
Q Consensus 405 ~~~l~~~i~~~l~ 417 (471)
++++++.|.+++.
T Consensus 360 ~~~V~~~l~~~~~ 372 (374)
T COG0399 360 VDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988764
No 60
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=9.3e-24 Score=215.32 Aligned_cols=354 Identities=14% Similarity=0.029 Sum_probs=227.7
Q ss_pred cChHHHHHHHHHHHhcc------CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHH
Q 012104 15 VDPEIHDLIEKEKRRQC------RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRA 86 (471)
Q Consensus 15 ~d~~~~~~~~~e~~~~~------~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~ 86 (471)
..+..+..++...++-+ ..++|..+++. .++.+++++...+......+|+. .| ...+.+...+++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G---~~~lr~aia~~~ 94 (410)
T PRK06290 22 TVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NG---IQEFKEAAARYM 94 (410)
T ss_pred CchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CC---cHHHHHHHHHHH
Confidence 33455666665444332 35888877755 46778888765543221123331 12 234444444566
Q ss_pred HHhcCCC-CCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC
Q 012104 87 LQTFHLD-PTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS 164 (471)
Q Consensus 87 ~~lfg~~-~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~ 164 (471)
.+.+|.+ .+. .-+|..++|+ +|+..++.++++|||+|++++|.|.++... +...| .+++.++++++
T Consensus 95 ~~~~g~~~~~~-~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~---------~~~~g--~~v~~v~~~~~ 162 (410)
T PRK06290 95 EKVFGVKDIDP-VTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTH---------TKYYG--GEVYNLPLLEE 162 (410)
T ss_pred HHHcCCCcCCC-cceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHH---------HHHcC--CEEEEEecCCC
Confidence 6556654 211 0146667776 688899999999999999999999876431 22334 46666666643
Q ss_pred -CCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCC--CC---
Q 012104 165 -TGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANP--FE--- 233 (471)
Q Consensus 165 -~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p--~~--- 233 (471)
++.+|++++++.+.. ++|+|+++ +||+|.+++.+ +|.++|+++|++|++|++|. .+.+.+..++. +.
T Consensus 163 ~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~~ 240 (410)
T PRK06290 163 NNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGAK 240 (410)
T ss_pred cCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCcc
Confidence 467899999988863 78988754 78999999964 55677999999999999997 55554432222 11
Q ss_pred CccEEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 234 YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 234 ~aDiv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
...|++.|++|++ +|.|.||+++++ ++.+.+.....+...+.+...+. +...++.. .+..
T Consensus 241 ~~~I~i~SfSK~~g~~GlRiG~ii~~~---------------~l~~~l~~~~~~~~~~~~~~~q~-aa~~~l~~--~~~~ 302 (410)
T PRK06290 241 EVGVEIHSLSKAYNMTGWRLAFVVGNE---------------LIVKAFATVKDNNDSGQFIAIQK-AGIYALDH--PEIT 302 (410)
T ss_pred ccEEEEeechhhcCCchhheEeEEeCH---------------HHHHHHHHHHhccccCCcHHHHH-HHHHHhhC--cHHH
Confidence 2349999999995 888999999876 45555544332222222222222 23334432 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCC------CCHHHHHHHHhhc-CeEeccCCcCCCCCCCC
Q 012104 312 KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLG------LTGNKVEKLCDLC-NITVNKNAVFGDSSALA 384 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~-gI~v~~~~~p~~~~~~~ 384 (471)
++..+++.++++.+.+.|++.|+.+. .+.++.++|+.+++.- .+..++.+.|.+. +|.+.++ .. .
T Consensus 303 ~~~~~~~~~~~~~l~~~L~~~g~~~~-~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~----~~---~ 374 (410)
T PRK06290 303 EKIREKYSRRLDKLVKILNEVGFKAE-MPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPW----DD---A 374 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeec-CCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECC----cc---c
Confidence 66777888889999999998898764 3456777888886421 2566776666554 5555443 21 1
Q ss_pred CCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 385 PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 385 ~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+++||++...+. ++++++++.+.|.+.|..
T Consensus 375 ~~~lRi~~~~~~~---~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 375 GHFLRFSVTFEAK---DEEEEDRILEEIKRRLSD 405 (410)
T ss_pred cCeEEEEEEcccc---cccchhHHHHHHHHHHhh
Confidence 3689999854332 478999999999888765
No 61
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=2.5e-24 Score=219.53 Aligned_cols=340 Identities=18% Similarity=0.188 Sum_probs=224.3
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYG-GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~-g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
++...+++.|++++...+...+ +.|+.+.+. +....+.++ .+++.+++++|+++++ .+.+.|+|.++..++.+
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~---v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWEAEEAVE-NARNQVAELIGADSRE---IVFTSGATESNNLAIKG 83 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHHHHHHHH-HHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 4556789999999988775554 344432111 111223344 4678899999998642 35566777899888776
Q ss_pred h----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CC
Q 012104 117 V----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GS 190 (471)
Q Consensus 117 l----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s 190 (471)
+ .++||+|++..++|.+..... ..+...| .+++.++++ +++.+|++++++.+.+ ++++|++. +|
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~------~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n 153 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTC------RYLEREG--FEVTYLPPK-SNGLIDLEELKAAIRD-DTILVSIMHVNN 153 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHH------HHHHhcC--CEEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECCCc
Confidence 5 378999999988776543110 0111123 455555555 4678999999998864 67877644 67
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCC
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQ 267 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~ 267 (471)
++|...|+++|.++|+++|+++++|++|++|.. |..+. ++|++++|+||++ ||.| |+++.+++....
T Consensus 154 ~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~~~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~~---- 223 (402)
T TIGR02006 154 EIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI-----PINVNELKVDLMSISGHKIY-GPKGIGALYVRRKPRVR---- 223 (402)
T ss_pred CceecccHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCccccCCCEEEEehhhhc-CCCceEEEEEccCCCCC----
Confidence 899999999999999999999999999986632 32333 6899999999964 7875 787777542100
Q ss_pred CCCcccchHhhhhhc--CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC--C
Q 012104 268 PEGAVYDFEDKINFA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT--E 342 (471)
Q Consensus 268 ~~i~~~~l~~~i~~~--~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~--~ 342 (471)
+...+... ......|+++...+++++.+++.+. .+++...++....++++.+.|++. ++.++.... .
T Consensus 224 -------~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~ 295 (402)
T TIGR02006 224 -------LEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRV 295 (402)
T ss_pred -------CCceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 00000000 0011246788889999988998765 467777788888899999999875 676653211 1
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--------------CCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--------------SALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--------------~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
.+.+.+.+. +++++++...|. +|.++.+...... .....+.+|+|+...|+ ++|++++
T Consensus 296 p~~~~v~f~--~~~~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t----~edid~l 367 (402)
T TIGR02006 296 PGNLNVSFN--YVEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTT----EEEIDYA 367 (402)
T ss_pred CCeEEEEEe--CcCHHHHHHhcC--CEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCC----HHHHHHH
Confidence 122234444 346666766663 6776655432110 01123789999987765 8999999
Q ss_pred HHHHHHHHHHH
Q 012104 409 GEFLHRAVTLT 419 (471)
Q Consensus 409 ~~~i~~~l~~~ 419 (471)
.+.|.++++..
T Consensus 368 ~~~l~~~~~~~ 378 (402)
T TIGR02006 368 VKLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHHH
Confidence 99999987653
No 62
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=7.1e-24 Score=215.35 Aligned_cols=338 Identities=13% Similarity=0.067 Sum_probs=214.2
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee-cCChH
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ-PYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~-~~sGt 107 (471)
.+.+.|..+++. .++.+.+++...+.+.. .+|+. ......+++...+++.+.+|..... .+|. +.+++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~ 100 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGV-TQYTS------ALGLAPLREAIAAWYARRFGLDVAP--ERIVVTAGAS 100 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCh--HhEEEecCcH
Confidence 466888777643 36788888877664321 12322 1223345444445666666753222 1343 44456
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.+++++||+|++.+|+|+++.. .+...| .+++.+++++ +++.+|++++++.+.. ++++|+
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 168 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRH---------FVAAAE--GRPVLVPSGPAERFQLTAADVEAAWGE-RTRGVL 168 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHH---------HHHHcC--CEEEEeecCCccCCcCCHHHHHhhcCc-cceEEE
Confidence 79999999999999999999999987642 112233 3455566664 3578999999998864 667665
Q ss_pred -Ec-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc-EEEeCCCCcC--CCCCeEEEEee
Q 012104 187 -CG-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH-IVTTTTHKSL--RGPRAGMIFYR 257 (471)
Q Consensus 187 -~~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD-iv~~s~~K~l--~GprgG~i~~~ 257 (471)
++ +||+|..++. ++|.++|+++|+++++|++|. ++.+.+...+.+. +.+ +++.|+||++ +|.|.||++++
T Consensus 169 l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~ 247 (388)
T PRK07337 169 LASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQ-GLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVP 247 (388)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecC
Confidence 44 7899998875 566788899999999999986 5655443223233 234 5688999985 78999999988
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+++.........+.+...+.++ ..++..-....+++..+++.++++.+.+.|++.|+.+.
T Consensus 248 ~---------------~l~~~l~~~~~~~~~~~s~~~q~~~-~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 311 (388)
T PRK07337 248 E---------------ALVGTFEKLAQNLFICASALAQHAA-LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVP 311 (388)
T ss_pred H---------------HHHHHHHHHHHHhccCCChHHHHHH-HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 6 4555454332222222223333332 23443211124566677778888889999988887642
Q ss_pred eCCCCCeeEEEEccCC----CCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPL----GLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~----~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
..+.++.++|++++.. .++..++. ++++++||.+.++..++.. ...+++||++.. .++.+++..+.|
T Consensus 312 ~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~--~~~~~~Ri~~~~------~~~~l~~~l~rl 383 (388)
T PRK07337 312 VMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPH--APRDYIRLSYAT------SMSRLEEAVARL 383 (388)
T ss_pred cCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC--CCCCEEEEEecC------CHHHHHHHHHHH
Confidence 2345678899998642 24666764 5678899999988766532 124799999842 245555544444
Q ss_pred HH
Q 012104 413 HR 414 (471)
Q Consensus 413 ~~ 414 (471)
.+
T Consensus 384 ~~ 385 (388)
T PRK07337 384 GK 385 (388)
T ss_pred HH
Confidence 43
No 63
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=1.5e-24 Score=217.52 Aligned_cols=304 Identities=17% Similarity=0.178 Sum_probs=210.1
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYG-GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~-g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
++...+++.|++++...+.+.+ +.|+.+.+. +....+.++ .+++.+++++|++.+ ..+.+.+++.|+.+++.+
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~v~~~~g~t~a~~~~l~~ 78 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE---EVIFTSGATESNNLAILG 78 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHHH
Confidence 3456788999999988875544 456654321 223334444 467889999999864 234455567899988888
Q ss_pred hc----CCC-CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--C
Q 012104 117 VL----EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--G 189 (471)
Q Consensus 117 ll----~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~ 189 (471)
+. ++| |.|++...+|+++.... ..+...| .+++.++++ +++.+|++++++.+. .++++|++. +
T Consensus 79 l~~~~~~~g~~~vi~~~~~~~s~~~~~------~~~~~~G--~~v~~v~~~-~~~~~d~~~l~~~l~-~~~~lv~~~~~~ 148 (353)
T TIGR03235 79 LARAGEQKGKKHIITSAIEHPAVLEPI------RALERNG--FTVTYLPVD-ESGRIDVDELADAIR-PDTLLVSIMHVN 148 (353)
T ss_pred HHHhcccCCCCeeeEcccccHHHHHHH------HHHHhcC--CEEEEEccC-CCCcCCHHHHHHhCC-CCCEEEEEEccc
Confidence 75 366 78888887776543211 0111123 455555555 457899999999986 468888754 6
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKG 266 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~ 266 (471)
|++|...|+++|.++|+++|+++++|++|+.|.+ +..+. ++|++++|+||+ .||.| |+++++++....
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~--- 219 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI-----TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPK--- 219 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-----cccccccCCCEEEeehhhc-CCCCceEEEEEccCcccc---
Confidence 7899999999999999999999999999987643 33333 689999999998 48876 888887742100
Q ss_pred CCCCcccchHhhhhhcC------CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC
Q 012104 267 QPEGAVYDFEDKINFAV------FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~------~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~ 340 (471)
..+.... .....|+++...++++..+++.+. .+.++..+++.++++++++.|++.|++++..+
T Consensus 220 ----------~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~ 288 (353)
T TIGR03235 220 ----------APLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQTLGVKLNGDP 288 (353)
T ss_pred ----------cccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhccCCeEEeCCc
Confidence 0011000 011246788888999998988764 46777888899999999999988899987433
Q ss_pred CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCC
Q 012104 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 341 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
......++.+...+++++++...|++ +|.|.++..++
T Consensus 289 ~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~~g~~~~ 325 (353)
T TIGR03235 289 AETIPHILNFSIDGVNSEALIVNLRA-DAAVSTGSACS 325 (353)
T ss_pred ccccCCEEEEEeCCcCHHHHHHHHhC-CeEEEchhhcC
Confidence 22222233444447788899999975 89998876554
No 64
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.7e-23 Score=212.05 Aligned_cols=336 Identities=15% Similarity=0.110 Sum_probs=217.4
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
..+.|+|..++|. .++.+++++...+......+|+. .+....+ ++.+++++|++.+. .+.+.+++
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~------~~g~~~l----r~~ia~~l~~~~~~---v~~~~g~t 93 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP------PEGFPEL----RELILKDLGLDDDE---ALITAGAT 93 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC------CcchHHH----HHHHHHhcCCCCCc---EEEeCCHH
Confidence 3567888777764 47899999887775432222322 1222233 46778889987642 34455677
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC--CCCCCCHHHHHHHhhhCCCcEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS--STGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~--~~~~iD~~~le~~~~~~~pklI 185 (471)
+|+..++.++++|||+|++.+|.|..+.. .+...|. ++++++++. .++.+|++.+++.+.. ++++|
T Consensus 94 ~al~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g~--~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~v 161 (380)
T PRK06225 94 ESLYLVMRAFLSPGDNAVTPDPGYLIIDN---------FASRFGA--EVIEVPIYSEECNYKLTPELVKENMDE-NTRLI 161 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHHhCc--eEEeeccccccCCccCCHHHHHhhcCC-CceEE
Confidence 89999999999999999999988764421 1123343 445555432 2468999999998864 68877
Q ss_pred E-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCC-CCCC-CccEEEeCCCCcC--CCCCeEEEEe
Q 012104 186 I-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NPFE-YCHIVTTTTHKSL--RGPRAGMIFY 256 (471)
Q Consensus 186 i-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~-~p~~-~aDiv~~s~~K~l--~GprgG~i~~ 256 (471)
+ ++ +||+|..++ +++|.++|+++|+++|+|++|. ++.. +..+ ..+. ...+++.|++|++ +|.|.|++++
T Consensus 162 ~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~-~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~ 239 (380)
T PRK06225 162 YLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAR-EHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVA 239 (380)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhc-cCCchhhcCCCCEEEEeechhhcCCccceeEEEec
Confidence 6 44 578998775 6778889999999999999985 4432 1111 1111 2358888999996 5778899999
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
++ ++.+.+..... ...+ .+....++...++... ...+++..+...++.+.+.+.|++. |+.
T Consensus 240 ~~---------------~l~~~~~~~~~-~~~~-~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (380)
T PRK06225 240 TP---------------DLIEVVKSIVI-NDLG-TNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVF 301 (380)
T ss_pred CH---------------HHHHHHHHHHh-cccC-CCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 76 45554443321 1112 2222222333344332 2233444445556677788888874 543
Q ss_pred EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 336 LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+...+..+.++|+++.+.+++..++.+.|.+.||.+.++..++ .....+++|+++.. ++++++++.+.|.++
T Consensus 302 ~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~--~~~~~~~iR~s~~~------~~e~l~~~~~~l~~~ 373 (380)
T PRK06225 302 LPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS--KRFGDRYIRVSFSI------PREQVEVFCEEFPDV 373 (380)
T ss_pred cccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC--cCCCCceEEEEeCC------CHHHHHHHHHHHHHH
Confidence 3222344567788887656788889888889999998875332 12235799999732 478999999999888
Q ss_pred HHH
Q 012104 416 VTL 418 (471)
Q Consensus 416 l~~ 418 (471)
+..
T Consensus 374 ~~~ 376 (380)
T PRK06225 374 VET 376 (380)
T ss_pred HHH
Confidence 764
No 65
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=1.3e-23 Score=213.55 Aligned_cols=337 Identities=17% Similarity=0.106 Sum_probs=215.8
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCce-eeecCCh
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGV-NVQPYSG 106 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~-~v~~~sG 106 (471)
.++.++|..+++. .++.+.+++.+.+......+|+.. .....+.+...+++.+.+|...+. . +|..++|
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~g~~~~~--~~~I~it~G 100 (388)
T PRK07366 29 GKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLF------HGTLDFREAAAQWYEQRFGLAVDP--ETEVLPLIG 100 (388)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCC------CCCHHHHHHHHHHHHHhhCCcCCC--cCeEEECCC
Confidence 3567889877754 367888888776543211223221 112234434445565555643221 2 3666666
Q ss_pred H-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcE
Q 012104 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKL 184 (471)
Q Consensus 107 t-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pkl 184 (471)
+ +|+..++.++++|||+|++.+|+|.++.. .+...| .++++++++++ .+.+|++++++.+. .++|+
T Consensus 101 s~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~ 168 (388)
T PRK07366 101 SQEGTAHLPLAVLNPGDFALLLDPGYPSHAG---------GVYLAG--GQIYPMPLRAENDFLPVFADIPTEVL-AQARL 168 (388)
T ss_pred cHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEECCCccCCCCCHHHHHHhhc-ccceE
Confidence 5 69999999999999999999999987743 122344 35556666643 36789999987775 36888
Q ss_pred EEE-c-CCCCCccccHHHH---HHHHHHhCCEEEEeccccchhhcccc--CCCCCC---Ccc--EEEeCCCCc--CCCCC
Q 012104 185 IIC-G-GSAYPRDWDYARF---RAVADKCGALLLCDMAHISGLVAAQE--AANPFE---YCH--IVTTTTHKS--LRGPR 250 (471)
Q Consensus 185 Ii~-~-~s~~g~~~d~~~i---~~ia~~~g~~livD~a~~~glv~~g~--~~~p~~---~aD--iv~~s~~K~--l~Gpr 250 (471)
|++ + +||+|..++.+++ .++|+++|++||+|++|. .+.+.+. .++... ..+ |++.|++|+ ++|.|
T Consensus 169 i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlR 247 (388)
T PRK07366 169 MVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYV-DLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFR 247 (388)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchh-hcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchh
Confidence 874 4 7899999987655 568899999999999987 6665543 222221 112 778999999 48999
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
.||+++++ ++.+++.....+...+.+...+.+++ .++.. ....+++..+.+.++.+.+.+.|+
T Consensus 248 iG~~v~~~---------------~li~~l~~~~~~~~~~~~~~~~~~a~-~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~ 310 (388)
T PRK07366 248 IGFAIGNA---------------QLIQALRQVKAVVDFNQYRGILNGAI-AALTG-PQATVQQTVQIFRQRRDAFINALH 310 (388)
T ss_pred heehcCCH---------------HHHHHHHHHHhhcccCCCHHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876 45555544322222222222222222 23432 123557777888888889999998
Q ss_pred cCCceEeeCCCCCeeEEEEccCC-CCCHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 331 GKGYSLVTGGTENHLVLWDLRPL-GLTGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 331 ~~g~~i~~~~~~~~~~~v~~~~~-~~~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
+.|+.+. .+..+.++|++++.. +.+..++ ..++++.||.+.++..++.. ..+++||++. . .++++++.
T Consensus 311 ~~~~~~~-~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~~--~----~~~~l~~~ 380 (388)
T PRK07366 311 QIGWPVP-LPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKS---GEGYVRFALV--H----DPDILEEA 380 (388)
T ss_pred HCCCccc-CCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcC---CCCeEEEEec--C----CHHHHHHH
Confidence 8887653 345677889998642 2245566 45558899999988765421 2478999983 2 24566655
Q ss_pred HHHHHH
Q 012104 409 GEFLHR 414 (471)
Q Consensus 409 ~~~i~~ 414 (471)
.+.|.+
T Consensus 381 l~rl~~ 386 (388)
T PRK07366 381 VERIAA 386 (388)
T ss_pred HHHHHH
Confidence 555543
No 66
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.94 E-value=3.7e-24 Score=220.49 Aligned_cols=303 Identities=17% Similarity=0.147 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeE
Q 012104 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE 155 (471)
Q Consensus 77 ~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~ 155 (471)
.+.+...+++....|..... .+|..++|+ +|+.+++..+++|||+|++.+|+|.+.++ .+...| .+
T Consensus 136 ~LR~~ia~~l~~~~g~~~~~--~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~---------~~~~~g--~~ 202 (459)
T COG1167 136 ELREAIAAYLLARRGISCEP--EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQ---------ALEALG--AR 202 (459)
T ss_pred HHHHHHHHHHHHhcCCccCc--CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHH---------HHHHcC--Cc
Confidence 44333445555445654322 256667776 59999999999999999999999987653 122334 46
Q ss_pred EEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc---CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 156 SLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG---GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 156 ~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~---~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
++++++| ...+|+|.|++.++..+||++++. +||+|.+++.+ +|.++|+++|++||+|+.++ .+.+.+..+
T Consensus 203 ~~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~-el~~~~~p~ 279 (459)
T COG1167 203 VIPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYG-ELRYDGPPP 279 (459)
T ss_pred EEecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcch-hhhcCCCCC
Confidence 6666666 356999999999998899999975 78999999885 77899999999999999987 666665544
Q ss_pred CCCCCc---c--EEEeCCCCc-CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHH
Q 012104 230 NPFEYC---H--IVTTTTHKS-LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 230 ~p~~~a---D--iv~~s~~K~-l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al 303 (471)
.++... + |+++||+|+ +||.|.||+++++ ++.+++.....-...+++.. ...+++.-+
T Consensus 280 ~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~---------------~~~~~~~~~k~~~~~~~s~~-~Q~~la~~l 343 (459)
T COG1167 280 PPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP---------------ELIEKLLRLKQAADLGPSSL-SQAALAAFL 343 (459)
T ss_pred CChHhhCCCCCEEEEeeehhhcccccceeeeeCCH---------------HHHHHHHHHHHHhcCCCChH-HHHHHHHHH
Confidence 444422 2 889999999 6899999999997 34444433221111222222 222333223
Q ss_pred HH-hccHHHHHHHHHHHHHHHHHHHHHHcCC--ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEecc-CCcCCC
Q 012104 304 KQ-ASTPAFKAYAKQVKANAVALGNYLTGKG--YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNK-NAVFGD 379 (471)
Q Consensus 304 ~~-~~~~~~~~~~~~~~~na~~l~~~L~~~g--~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~-~~~p~~ 379 (471)
.. ......++..+.+.+..+.+.+.|.+.+ .-.+..+.+..++|+++.. +++..++...+.+.|+.+.+ +..+..
T Consensus 344 ~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~-~~~~~~l~~~a~~~gv~i~~~g~~f~~ 422 (459)
T COG1167 344 LSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPE-GIDARELLAAALEKGVVVTPLGSAFSA 422 (459)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCC-CCCHHHHHHHHHHCCCEEEcCCccccC
Confidence 21 1122335555556666778888888763 2222455667889999864 67888898888899999988 655443
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
... ..+++|||++..+ ++++++..+.|.+++..
T Consensus 423 ~~~-~~~~~Rl~~s~~~-----~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 423 DGD-PRNGLRLSFSSPS-----EEEIEEGIKRLAALLRE 455 (459)
T ss_pred CCC-CCCeEEEEcCCCC-----HHHHHHHHHHHHHHHHH
Confidence 322 4569999996543 57777777777776654
No 67
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.94 E-value=1.9e-23 Score=210.95 Aligned_cols=346 Identities=17% Similarity=0.159 Sum_probs=226.5
Q ss_pred ChHHHHHHHHHHHhcc--CCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC
Q 012104 16 DPEIHDLIEKEKRRQC--RGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD 93 (471)
Q Consensus 16 d~~~~~~~~~e~~~~~--~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~ 93 (471)
+.|+++.+..-.++.. ..+ |........|.+.+++...+...+ |.+. .+.+ ...+++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~---~~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPG---TAKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCcc---HHHHHHHHHHHHHHHhCCC
Confidence 4577777765433322 122 433345667888899877665432 3332 2222 2233445678899999987
Q ss_pred CCCCceeeecCChHHHHHHHHHHhcC----CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCC
Q 012104 94 PTQWGVNVQPYSGSPANFAAYTAVLE----PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (471)
Q Consensus 94 ~~~~~~~v~~~sGt~A~~~~~~all~----pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD 169 (471)
.. ..+.+.+|+.||..++.++.+ +||+|++.++.|.++. +.+...|. +++.++.+ +++.+|
T Consensus 76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~---------~~~~~~g~--~~~~v~~~-~~~~~d 140 (371)
T PRK13520 76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD---------KAADMLGV--ELRRAPLD-DDYRVD 140 (371)
T ss_pred CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH---------HHHHHcCc--eEEEecCC-CCCcCC
Confidence 53 135567888999998877643 6899999987654321 11223444 33444444 457899
Q ss_pred HHHHHHHhhhCCCcEEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC--CC--CCCccEEEeCCC
Q 012104 170 YDKLEEKALDFRPKLII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NP--FEYCHIVTTTTH 243 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p--~~~aDiv~~s~~ 243 (471)
+++|++.+.+ ++++|+ +. .|++|...|+++|.++|+++|+++++|++|+.+........ .. ..++|.+++|+|
T Consensus 141 ~~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 141 VKAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 9999999974 565444 33 57899999999999999999999999999974432111111 11 236899999999
Q ss_pred CcCCCC-CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCC--------CCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 244 KSLRGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS--------LQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 244 K~l~Gp-rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~--------~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
|++.+| ++|++++.++ ++.+.+... .|. ..|++....++++..+++.+...+++++
T Consensus 220 K~~~a~~~~G~~~~~~~--------------~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~ 284 (371)
T PRK13520 220 KMGLAPIPAGGILFRDE--------------SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKV 284 (371)
T ss_pred cccCccCCceEEEEcCH--------------HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHH
Confidence 995433 4566665442 233322210 111 1233444456667677877666678888
Q ss_pred HHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 315 AKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
.++..+++++|.+.|++.|++++..+ ..+++.+++. +.+++.+.|.+.||.++... .++.+|++++.
T Consensus 285 ~~~~~~~~~~l~~~L~~~g~~~~~~~-~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~ 351 (371)
T PRK13520 285 VERCMENTRWLAEELKERGFEPVIEP-VLNIVAFDDP----NPDEVREKLRERGWRVSVTR--------CPEALRIVCMP 351 (371)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEecCC-CceEEEEecC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEEC
Confidence 99999999999999998899843332 3446666653 46788888988899987532 13689999865
Q ss_pred CCCcCCCHHHHHHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+ +++|++++.+.|.++++
T Consensus 352 ~~----t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 352 HV----TREHIENFLEDLKEVKK 370 (371)
T ss_pred CC----CHHHHHHHHHHHHHHhh
Confidence 44 48999999999987654
No 68
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=1.4e-23 Score=215.27 Aligned_cols=347 Identities=13% Similarity=0.041 Sum_probs=214.6
Q ss_pred cCCeeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecC
Q 012104 31 CRGIELIASEN-----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY 104 (471)
Q Consensus 31 ~~~i~li~s~n-----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~ 104 (471)
++.|+|.-++. + .++.+.+++...+......+|+.. ....++.+...+++.+..|.+.+.. -.+.+.
T Consensus 52 ~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~-~v~it~ 124 (430)
T PLN00145 52 RPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC------VGLLPARRAIAEYLSRDLPYELSTD-DIYLTA 124 (430)
T ss_pred CCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC------ccCHHHHHHHHHHHhhccCCCCChh-hEEEeC
Confidence 36788866654 2 367889998877754322244332 1123344333344433334332211 123344
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCc
Q 012104 105 SGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 105 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pk 183 (471)
++++|+..++.++++|||+|++++|.|+.+.. .....|. +++.+++.+ +++.+|++++++++.. +++
T Consensus 125 G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~ 192 (430)
T PLN00145 125 GCAQAIEIIMSVLAQPGANILLPRPGYPLYEA---------RAVFSGL--EVRHFDLLPERGWEVDLEGVEALADE-NTV 192 (430)
T ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHcCC--EEEEeeCCcccCCcCCHHHHHHHhCc-Cce
Confidence 55689999999999999999999999887542 1223443 444454433 3578999999998864 566
Q ss_pred EEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CCc-c-EEEeCCCCc--CCCCCe
Q 012104 184 LII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EYC-H-IVTTTTHKS--LRGPRA 251 (471)
Q Consensus 184 lIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~a-D-iv~~s~~K~--l~Gprg 251 (471)
+|+ ++ +||+|.+++ +++|.++|+++|++||+|++|. .+++.+....++ ... . +++.|++|+ ++|+|.
T Consensus 193 ~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 193 AMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYD-HLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccch-hhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 555 55 789999998 5567778999999999999996 666654322222 221 2 889999999 799999
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
||++.+.+-. .+....+.+.+.... ....++.....+++..++..-....+++..+++.++++.+.+.|++
T Consensus 272 G~iv~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 342 (430)
T PLN00145 272 GWIATCDPNG-------ILKETKVVDSIRNYL--NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE 342 (430)
T ss_pred EEEEEecchh-------hhhhhHHHHHHHHHh--cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999753200 000001122333322 1122233333344444554322335677888888899999999988
Q ss_pred C-CceEeeCCCCCeeEEEEccCC---CC-CHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHH
Q 012104 332 K-GYSLVTGGTENHLVLWDLRPL---GL-TGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 332 ~-g~~i~~~~~~~~~~~v~~~~~---~~-~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
. |+.....+.++.++|+++... ++ +..++ .+++++.||.+.++..++. ++++||++.. .++.+
T Consensus 343 ~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~-----~~~lRis~~~------~~~~l 411 (430)
T PLN00145 343 IKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGM-----KNWLRITFAI------DPPSL 411 (430)
T ss_pred CCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeCC------CHHHH
Confidence 6 776433456778889887421 22 44444 6788899999998876652 4799999842 24555
Q ss_pred HHHHHHHHHHHH
Q 012104 406 EQIGEFLHRAVT 417 (471)
Q Consensus 406 ~~l~~~i~~~l~ 417 (471)
+...+.|.+.+.
T Consensus 412 ~~al~rl~~~~~ 423 (430)
T PLN00145 412 EDGLERLKSFCL 423 (430)
T ss_pred HHHHHHHHHHHH
Confidence 555555554443
No 69
>PLN02483 serine palmitoyltransferase
Probab=99.93 E-value=9.6e-24 Score=219.09 Aligned_cols=336 Identities=18% Similarity=0.130 Sum_probs=215.1
Q ss_pred cCCeeEecCCCCC-----cHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecC
Q 012104 31 CRGIELIASENFT-----SFAVIEALGSALTNKYSEGMPGNRY-YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY 104 (471)
Q Consensus 31 ~~~i~li~s~n~~-----s~~v~~a~~~~l~~~~~~g~~~~r~-~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~ 104 (471)
+..|+|. |.||+ .+.+.++....+ .+|..+..+.|. |+......++| +.+++++|.+. .|..+
T Consensus 100 ~~~~n~~-s~~YLgl~~~~~~~~~~~~~ai-~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~ 168 (489)
T PLN02483 100 RRCLNLG-SYNYLGFAAADEYCTPRVIESL-KKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFG 168 (489)
T ss_pred ceEEEee-cCCccCcCCCCHHHHHHHHHHH-HHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEEC
Confidence 3456654 67764 122333333322 235555556664 33355666666 67889999765 46678
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh-----
Q 012104 105 SGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD----- 179 (471)
Q Consensus 105 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~----- 179 (471)
+|+.+|.+++.++++|||.|++.++.|.+... .+...|. +++.++. .|++++++++++
T Consensus 169 ~G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~---------~~~~~Ga--~v~~~~~------~d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 169 MGYATNSTIIPALIGKGGLIISDSLNHNSIVN---------GARGSGA--TIRVFQH------NTPSHLEEVLREQIAEG 231 (489)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcchhhHHHHH---------HHHHcCC--eEEEEeC------CCHHHHHHHHHhhhhcc
Confidence 89999999999999999999999998876542 1223444 4444432 256777665542
Q ss_pred -C---CC--c-EEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc--CC-CCC--CCccEEEeCCCC
Q 012104 180 -F---RP--K-LIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE--AA-NPF--EYCHIVTTTTHK 244 (471)
Q Consensus 180 -~---~p--k-lIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~--~~-~p~--~~aDiv~~s~~K 244 (471)
. +| + +|+++ .|+.|...++++|.++|+++|++|++|++|+.|.... |. .+ ..+ ...||+++|+||
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSK 311 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTK 311 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecch
Confidence 1 12 5 44454 5778989999999999999999999999998654321 11 10 111 256899999999
Q ss_pred cCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhcc----HHHHHHHHHHH
Q 012104 245 SLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQAST----PAFKAYAKQVK 319 (471)
Q Consensus 245 ~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~----~~~~~~~~~~~ 319 (471)
++ |+.||++++++ ++.+.+........ .++.....+++...+++.+.. ....+..+++.
T Consensus 312 s~-g~~GG~i~~~~---------------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~ 375 (489)
T PLN02483 312 SF-GSCGGYIAGSK---------------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIR 375 (489)
T ss_pred hc-ccCceEEEcCH---------------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHH
Confidence 98 56789999877 45555554322111 122333333344455654331 12345677889
Q ss_pred HHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 320 ANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 320 ~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
++++++++.|++.|+.+. +..++..+++-+... .+..++.+.|.++||.+.+...|. .|...+.+||++++..+
T Consensus 376 ~~~~~l~~~L~~~G~~v~-~~~~sp~~~l~l~~~-~~~~~~~~~Ll~~GI~v~~~~fp~--~p~~~~~vRi~isa~~t-- 449 (489)
T PLN02483 376 ENSNFFRSELQKMGFEVL-GDNDSPVMPIMLYNP-AKIPAFSRECLKQNVAVVVVGFPA--TPLLLARARICISASHS-- 449 (489)
T ss_pred HHHHHHHHHHHHCCCccc-CCCCCCEEEEEECCH-HHHHHHHHHHHHCCcEEeeeCCCC--CCCCCceEEEEeCCCCC--
Confidence 999999999999998775 334444555443221 134467677778899998643333 23334789999866543
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l~~ 418 (471)
++|++++.+.|.+++..
T Consensus 450 --~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 450 --REDLIKALEVISEVGDL 466 (489)
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 79999999999987654
No 70
>PLN02187 rooty/superroot1
Probab=99.93 E-value=1.1e-23 Score=217.60 Aligned_cols=343 Identities=13% Similarity=0.093 Sum_probs=211.1
Q ss_pred cCCeeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC--CCCCCCceeee
Q 012104 31 CRGIELIASEN-----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--LDPTQWGVNVQ 102 (471)
Q Consensus 31 ~~~i~li~s~n-----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg--~~~~~~~~~v~ 102 (471)
+..|+|..++. + +++.+.+++...+......+|.. ......+.+...+++.+.++ ++.+ +|.
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lR~aiA~~~~~~~~~~~~~~----~I~ 135 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGP------GAGILPARRAVADYMNRDLPHKLTPE----DIF 135 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCChHHHHHHHHHHHHHhcCCCCCcc----cEE
Confidence 45778866643 2 24678888877664322122311 12223344333344444344 3443 344
Q ss_pred cCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhC
Q 012104 103 PYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDF 180 (471)
Q Consensus 103 ~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~ 180 (471)
.++| ++|+..++.++++|||+|++++|.|+++.. .+...|. +++.+++.+ +++.+|++++++++..
T Consensus 136 it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~---------~~~~~g~--~~~~~~l~~~~~~~~d~~~l~~~~~~- 203 (462)
T PLN02187 136 LTAGCNQGIEIVFESLARPNANILLPRPGFPHYDA---------RAAYSGL--EVRKFDLLPEKEWEIDLEGIEAIADE- 203 (462)
T ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHH---------HHHHcCC--EEEEEeCccccCCccCHHHHHHhcCC-
Confidence 4555 579999999999999999999999987632 1223444 444444432 4588999999998864
Q ss_pred CCcEE-EEc-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Cc----cEEEeCCCCc--CCC
Q 012104 181 RPKLI-ICG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC----HIVTTTTHKS--LRG 248 (471)
Q Consensus 181 ~pklI-i~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~a----Div~~s~~K~--l~G 248 (471)
++++| +++ +||+|.+++ +++|.++|+++|++||+|++|. .+++.+....++. .. =+++.|++|+ ++|
T Consensus 204 ~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~-~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG 282 (462)
T PLN02187 204 NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYD-RTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG 282 (462)
T ss_pred CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCceeHHHhccCCcEEEEecchhhcCCcc
Confidence 55544 566 789999998 4566788899999999999997 7766543222332 11 2778999999 689
Q ss_pred CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 012104 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (471)
Q Consensus 249 prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~ 327 (471)
+|.||++++++.. + .++.+.+.....+. ...+++.....+++.++.......+++..+.+.++++.+.+
T Consensus 283 lRiG~~v~~~p~~--------~--~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~ 352 (462)
T PLN02187 283 WKIGWIALNDPEG--------V--FETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCD 352 (462)
T ss_pred ceeEEEEecCchh--------H--HHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999854200 0 01222333222221 22233344444555556532223557778888889999999
Q ss_pred HHHcCCceE-eeCCCCCeeEEEEccC---CCC-CHHH-HHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 328 YLTGKGYSL-VTGGTENHLVLWDLRP---LGL-TGNK-VEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 328 ~L~~~g~~i-~~~~~~~~~~~v~~~~---~~~-~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
.|++.+... +..+.++.++|+++.. .++ +..+ +.+++.++||.+.++..++ ..++|||++. +.
T Consensus 353 ~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg-----~~~~iRis~~--~~---- 421 (462)
T PLN02187 353 RLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG-----LKNWMRITIG--VE---- 421 (462)
T ss_pred HHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC-----CCCeEEEEeC--CC----
Confidence 998875322 2234556778887642 233 3434 4677899999999887654 2479999983 22
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVT 417 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~ 417 (471)
++.+++..+.|.+.++
T Consensus 422 ~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 422 AHMLEDALERLKGFCT 437 (462)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555555555555443
No 71
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.5e-23 Score=210.45 Aligned_cols=340 Identities=16% Similarity=0.108 Sum_probs=211.4
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCce-eeecCChH
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGV-NVQPYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~-~v~~~sGt 107 (471)
.+.++|..+... .++.+++++...+......+|+.. .....+.+...+++.+.+|.+... . +|..++|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lR~~ia~~l~~~~~~~~~~--~~~I~it~G~ 104 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVS------KGIYKLRLAICNWYKRKYNVDLDP--ETEVVATMGS 104 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCC--CCeEEECCCh
Confidence 356777654422 355566666544422111233321 222344444456676666754321 1 35556665
Q ss_pred -HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHH----HHHHhhh--
Q 012104 108 -PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDK----LEEKALD-- 179 (471)
Q Consensus 108 -~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~----le~~~~~-- 179 (471)
+|+..++.++++|||+|++.+|+|+++.. .+...| .++++++++. +++.+|++. ++++++.
T Consensus 105 ~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~ 173 (403)
T PRK08636 105 KEGYVHLVQAITNPGDVAIVPDPAYPIHSQ---------AFILAG--GNVHKMPLEYNEDFELDEDQFFENLEKALRESS 173 (403)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEeccccccCccChhhhhhHHHHHHhhcc
Confidence 69999999999999999999999987643 122344 3555555542 346899875 4665553
Q ss_pred CCCcEEE-Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCC---CC-Ccc--EEEeCCCCcC--
Q 012104 180 FRPKLII-CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-YCH--IVTTTTHKSL-- 246 (471)
Q Consensus 180 ~~pklIi-~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p---~~-~aD--iv~~s~~K~l-- 246 (471)
.++++|+ ++ +||+|..++.+ +|.++|++++++||+|++|. .+.+.+....+ ++ ..+ ++++|++|++
T Consensus 174 ~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 252 (403)
T PRK08636 174 PKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA-DITFDGYKTPSILEVEGAKDVAVESYTLSKSYNM 252 (403)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccch-hhccCCCCCCChhcCCCccccEEEEEecccccCC
Confidence 3566665 54 79999999875 55678899999999999987 66655432122 22 223 5588999995
Q ss_pred CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 012104 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALG 326 (471)
Q Consensus 247 ~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~ 326 (471)
+|.|.||+++++ ++.+.+.+.......+.+...+.++. .++... ....++..+.+.++.+.+.
T Consensus 253 ~GlRiG~iv~~~---------------~li~~~~~~~~~~~~~~~~~~q~~~~-~~~~~~-~~~~~~~~~~~~~~~~~l~ 315 (403)
T PRK08636 253 AGWRVGFVVGNK---------------KLVGALKKIKSWLDYGMFTPIQVAAT-IALDGD-QSCVEEIRETYRKRRDVLI 315 (403)
T ss_pred ccceeeeeeCCH---------------HHHHHHHHHHHHhcccCChHHHHHHH-HHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence 899999999877 44444443221111122333333332 344322 2345666777788888899
Q ss_pred HHHHcCCceEeeCCCCCeeEEEEccCC--CCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHH
Q 012104 327 NYLTGKGYSLVTGGTENHLVLWDLRPL--GLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEK 403 (471)
Q Consensus 327 ~~L~~~g~~i~~~~~~~~~~~v~~~~~--~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~ 403 (471)
+.|++.|+.+. .+.++.++|+++++. +++..++. +++++.||.+.++..++.. ..+++||++. + .++
T Consensus 316 ~~L~~~~~~~~-~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~---~~~~iRi~~~--~----~~~ 385 (403)
T PRK08636 316 ESFANAGWELQ-KPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEY---GDEYVRIALI--E----NEN 385 (403)
T ss_pred HHHHHCCCccc-CCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcC---CCCeEEEEec--C----CHH
Confidence 99988887764 345677889998642 23456665 5577899999887665422 2479999983 2 256
Q ss_pred HHHHHHHHHHHHHH
Q 012104 404 DFEQIGEFLHRAVT 417 (471)
Q Consensus 404 d~~~l~~~i~~~l~ 417 (471)
.+++..+.|.+.++
T Consensus 386 ~l~~~~~rl~~~l~ 399 (403)
T PRK08636 386 RIRQAARNIKKFLK 399 (403)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666655554
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.93 E-value=2e-23 Score=209.54 Aligned_cols=312 Identities=16% Similarity=0.128 Sum_probs=205.1
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc
Q 012104 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (471)
Q Consensus 39 s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all 118 (471)
+-++.|++|++++.....+ | +. .+.+.+.++++++++||+++ + +.+.|+|.|+.+++.+++
T Consensus 21 g~s~~~~~v~~a~~~~~~~-~---------~~----~~~~~~~~~~~~a~~~g~~~----~-~~~~g~t~al~~al~al~ 81 (363)
T TIGR01437 21 GVSTVSDEVADAQKRGAQN-Y---------FE----IKELVNKTGEYIANLLGVED----A-VIVSSASAGIAQSVAAVI 81 (363)
T ss_pred CCCCCCHHHHHHHHHHHhc-C---------CC----HHHHHHHHHHHHHHhhCCCe----E-EEEcCHHHHHHHHHHHHh
Confidence 4456799999999877543 2 11 12333345688999999875 3 567788999999999999
Q ss_pred CCCC---------------EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCc
Q 012104 119 EPHD---------------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 119 ~pGD---------------~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pk 183 (471)
+||| +|+++.|.+..+.. .+ . ..+...|. +++.+++ ++.+|++++++++. .+++
T Consensus 82 ~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~-~~-~---~~~~~~g~--~~v~v~~---~~~~d~~~le~ai~-~~t~ 150 (363)
T TIGR01437 82 TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGA-PV-E---TMVRLGGG--KVVEAGY---ANECSAEQLEAAIT-EKTA 150 (363)
T ss_pred cCCCcchhhcccccccccceEEEECccchhcCC-ch-H---HHHHhcCC--eEEEEcC---CCCCCHHHHHHhcC-hhce
Confidence 9998 77776533221100 00 0 01122343 4445543 25799999999997 4788
Q ss_pred EEE-E-c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCCCCeEEEEeeCC
Q 012104 184 LII-C-G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKG 259 (471)
Q Consensus 184 lIi-~-~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~GprgG~i~~~~~ 259 (471)
+|+ + + ++++|...|+++|.++|+++|+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 151 ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~- 223 (363)
T TIGR01437 151 AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK- 223 (363)
T ss_pred EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH-
Confidence 665 3 3 5678989999999999999999999999996221 11112 5899999999999999999988765
Q ss_pred CCCCCCCCCCCcccchHhhhhhcCC---CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFAVF---PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~~~---~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
++.+.+..... ...+. ....++++..|+.++...+ .+..++..++++.+.+.|.+. |++
T Consensus 224 --------------~~i~~~~~~~~~~~~~~~~--~~~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~ 286 (363)
T TIGR01437 224 --------------KYIEWVKLQSKGIGRAMKV--GKENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVS 286 (363)
T ss_pred --------------HHHHHHHhccCCCcceecc--CHHHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeE
Confidence 33333321111 11111 1123567777777765322 334445556777899999887 888
Q ss_pred EeeC--CC----CCeeEEEEccCCCCCHHHHHHHHhhcC--eEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 336 LVTG--GT----ENHLVLWDLRPLGLTGNKVEKLCDLCN--ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 336 i~~~--~~----~~~~~~v~~~~~~~~~~~~~~~L~~~g--I~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
+... +. +...+.++....++++.++.+.|.+.+ |.++.. +. ..+.+|++... ++++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~--~~-----~~~~~~l~~~~-----~~~~e~~~ 354 (363)
T TIGR01437 287 ASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGY--KA-----NEGIIEIDPRS-----VTGGQLDI 354 (363)
T ss_pred EEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeee--ee-----cCCeEEEEeec-----CCHHHHHH
Confidence 7631 11 112233444335789999999998777 665441 11 24689998743 45899999
Q ss_pred HHHHHHHHH
Q 012104 408 IGEFLHRAV 416 (471)
Q Consensus 408 l~~~i~~~l 416 (471)
+++.|.+++
T Consensus 355 ~~~~l~~~~ 363 (363)
T TIGR01437 355 IVERIREIV 363 (363)
T ss_pred HHHHHHHhC
Confidence 999998753
No 73
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=4.5e-23 Score=209.26 Aligned_cols=339 Identities=17% Similarity=0.115 Sum_probs=217.0
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee-cCCh
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ-PYSG 106 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~-~~sG 106 (471)
..+.++|..+.+. .++.+.+++...+.+.+ .+|+. ......+++...+++.+.+|...+. .-+|. ++++
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~l~~~~g~~~~~-~~~I~~t~G~ 98 (387)
T PRK07683 27 YDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH------NAGLLELRKAACNFVKDKYDLHYSP-ESEIIVTIGA 98 (387)
T ss_pred cCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEeCCh
Confidence 3456888766543 35678888887765432 12321 1222345544445555444543211 00233 4455
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi 186 (471)
++|+.+++.+++++||+|++++|.|+++.. .+...| .+++.++++.+++.+|.+++++.+.. ++++|+
T Consensus 99 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~i~ 166 (387)
T PRK07683 99 SEAIDIAFRTILEPGTEVILPAPIYPGYEP---------IIRLCG--AKPVFIDTRSTGFRLTAEALENAITE-KTRCVV 166 (387)
T ss_pred HHHHHHHHHHhCCCCCEEEEcCCCccchHH---------HHHHcC--CEEEEeecCcccCCCCHHHHHHhcCc-CceEEE
Confidence 689999999999999999999999877532 122334 45666776656677899999998864 688776
Q ss_pred Ec--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-C-----ccEEEeCCCCcC--CCCCeEE
Q 012104 187 CG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-Y-----CHIVTTTTHKSL--RGPRAGM 253 (471)
Q Consensus 187 ~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~-----aDiv~~s~~K~l--~GprgG~ 253 (471)
+. +||+|..++ +++|.++|+++|++|++|++|. .+.+.+..+ ++. . -.+++.|++|.+ +|.|.||
T Consensus 167 i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 167 LPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPHT-SIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCcC-ChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 44 689999876 5677788999999999999997 555443222 221 1 238899999994 7889999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
+++++ ++.+.+.........+.+...+ .+....+..- ....++..+++.++++.+.+.|.+.|
T Consensus 245 i~~~~---------------~l~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 307 (387)
T PRK07683 245 LFAPS---------------YLAKHILKVHQYNVTCASSISQ-YAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLISMG 307 (387)
T ss_pred EEcCH---------------HHHHHHHHHHHhccCCCChHHH-HHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99887 4444443321111111222222 2222334321 22445666777788888999998888
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.+. .+..++++|+.+...+++..++. ++|+++||.+.+++.++. ...+++||++.. .++++++..+.|
T Consensus 308 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~---~~~~~~Ri~~~~------~~~~~~~al~~l 377 (387)
T PRK07683 308 LDVE-KPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSE---YGEGYVRLSYAY------SIETLKEGLDRL 377 (387)
T ss_pred Cccc-CCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCC---CCCCeEEEEecC------CHHHHHHHHHHH
Confidence 7764 34566778887765455666664 567899999998865542 235799999832 366777777777
Q ss_pred HHHHH
Q 012104 413 HRAVT 417 (471)
Q Consensus 413 ~~~l~ 417 (471)
.+++.
T Consensus 378 ~~~l~ 382 (387)
T PRK07683 378 EAFLQ 382 (387)
T ss_pred HHHHH
Confidence 66554
No 74
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.93 E-value=1.6e-23 Score=212.41 Aligned_cols=331 Identities=20% Similarity=0.153 Sum_probs=218.1
Q ss_pred cCCeeEecCCC--C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 31 CRGIELIASEN--F-TSFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 31 ~~~i~li~s~n--~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
+..|++..+++ + .+|.|++++...+.. |..+++..+...|. ...+. .+++++++++.+. .+.+++|
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~g 108 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARR-YGAGSGGSRLVTGNSPAHEA----LEEELAEWFGAER-----ALLFSSG 108 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHh-cCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEECcH
Confidence 45678877764 3 468999999887743 43344333332222 22222 3467888888542 4667889
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcE
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKL 184 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pkl 184 (471)
+.++..++.++++|||+|++.++.|+++.. .+...|. +++.++ ..|++.+++.+... ++.+
T Consensus 109 ~~~~~~~l~~~~~~gd~V~~~~~~~~~~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~i~~~~~~~~l 171 (385)
T PRK05958 109 YAANLAVLTALAGKGDLIVSDKLNHASLID---------GARLSRA--RVRRYP------HNDVDALEALLAKWRAGRAL 171 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCccCHHHHH---------HHHhcCC--ceEEeC------CCCHHHHHHHHHhccCCCeE
Confidence 998888888899999999999988876542 1223333 223322 24899999988753 3456
Q ss_pred EEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc-CCC--CCC-C-ccEEEeCCCCcCCCCCeEEEEe
Q 012104 185 IICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE-AAN--PFE-Y-CHIVTTTTHKSLRGPRAGMIFY 256 (471)
Q Consensus 185 Ii~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~-~~~--p~~-~-aDiv~~s~~K~l~GprgG~i~~ 256 (471)
++++ .+++|...++++|+++|+++|++|++|++|..|.... |. .+. .+. . .+|++.|+||++ |+.||+++.
T Consensus 172 vi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~ 250 (385)
T PRK05958 172 IVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLG 250 (385)
T ss_pred EEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEc
Confidence 6665 5678888999999999999999999999997664321 21 111 122 2 348899999998 667898888
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCce
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~ 335 (471)
++ ++.+.+.....+.. .++++..++++...+++.... .++..+++.++.+++.+.|++.|++
T Consensus 251 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~ 313 (385)
T PRK05958 251 SE---------------TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRALGFQ 313 (385)
T ss_pred CH---------------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 76 44444433222222 233445555555556665432 1456778888899999999988887
Q ss_pred EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 336 LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.. + .+.++++.+.. ..+..++.+.|.+.||.+.+...+.. +...+++||+++..+ ++++++++.+.|.++
T Consensus 314 ~~~-~-~~~~~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~~~--~~~~~~lRis~~~~~----~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 314 LMD-S-QSAIQPLIVGD-NERALALAAALQEQGFWVGAIRPPTV--PAGTSRLRITLTAAH----TEADIDRLLEALAEA 384 (385)
T ss_pred cCC-C-CCCEEEEEeCC-HHHHHHHHHHHHHCCceEecccCCCC--CCCCceEEEEecCCC----CHHHHHHHHHHHHhc
Confidence 643 2 34466776642 23556788888889999986433321 122468999985443 489999999998765
No 75
>PRK08068 transaminase; Reviewed
Probab=99.93 E-value=5e-23 Score=209.19 Aligned_cols=320 Identities=16% Similarity=0.083 Sum_probs=207.4
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee-cCChH
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ-PYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~-~~sGt 107 (471)
.+.|+|..++.. .++.+.+++...+......+|+. ......+.+...+++.+.+|.+.+. .-+|. +++++
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~g~~~lr~aia~~~~~~~g~~~~~-~~~i~it~G~~ 104 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP------FRGYPFLKEAAADFYKREYGVTLDP-ETEVAILFGGK 104 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CccEEEcCCcH
Confidence 456888766533 35678888876654322223322 1122345444445555555743221 01243 44555
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi 186 (471)
+++..++.++++|||+|++.+|+|+.+.. .+...| .+++.++++++ ++.+|++++++.+. .++++|+
T Consensus 105 ~~l~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g--~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~ 172 (389)
T PRK08068 105 AGLVELPQCLMNPGDTILVPDPGYPDYLS---------GVALAR--AQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMY 172 (389)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEeecccccCCCCCHHHHHHhcc-ccceEEE
Confidence 78888999999999999999999987642 122344 35556666644 46789999998885 4788777
Q ss_pred -Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCC-CC--C---ccEEEeCCCCcC--CCCCeEE
Q 012104 187 -CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANP-FE--Y---CHIVTTTTHKSL--RGPRAGM 253 (471)
Q Consensus 187 -~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p-~~--~---aDiv~~s~~K~l--~GprgG~ 253 (471)
++ +||+|..++.+ +|.++|+++|++||+|++|. .+.+.+..+.+ +. . -.+++.|++|++ +|.|.||
T Consensus 173 l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~-~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 251 (389)
T PRK08068 173 LNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYG-AIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAF 251 (389)
T ss_pred EECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhh-hhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEe
Confidence 43 78999999886 55568899999999999986 55554422222 21 1 238899999995 7889999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
+++++ ++.+.+.....+...+.+...+.++ +.++... ...+++..+++.++.+.+.+.|++.|
T Consensus 252 ~~~~~---------------~l~~~l~~~~~~~~~~~~~~~q~~~-~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~g 314 (389)
T PRK08068 252 AVGNE---------------SVIEAINLLQDHLFVSLFGAIQDAA-IEALLSD-QSCVAELVARYESRRNAFISACREIG 314 (389)
T ss_pred EecCH---------------HHHHHHHHHHhhccCCCChHHHHHH-HHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99876 4555555433222223332233332 2334321 23457778888888899999999889
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHh-hcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCD-LCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
+.+. .+.+++++|+++.+ +++..++.+.|. ++||.+.++..++. ...+++||++
T Consensus 315 ~~~~-~~~g~~~~~v~~~~-~~~~~~~~~~l~~~~gi~v~pg~~f~~---~~~~~iRi~~ 369 (389)
T PRK08068 315 WEVD-APKGSFFAWMPVPK-GYTSEQFADLLLEKAHVAVAPGNGFGE---HGEGYVRVGL 369 (389)
T ss_pred Cccc-CCCeeEEEEEECCC-CCCHHHHHHHHHHhCCEEEecchHhCc---cCCCeEEEEE
Confidence 8764 44566778998854 457778876665 57999988765542 2247999998
No 76
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=213.47 Aligned_cols=332 Identities=14% Similarity=0.111 Sum_probs=215.5
Q ss_pred cCCCCC----cHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 38 ASENFT----SFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 38 ~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r-~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
+|.+|+ +|+++++....+ .+|..|+.++| +|+......++| +++++++|.+. .+.++||+.|+..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE----~~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELE----QCMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHHH
Confidence 467775 688888887766 45777887777 444445566666 67899999875 3667899999999
Q ss_pred HHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHH---hhh----------
Q 012104 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEK---ALD---------- 179 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~---~~~---------- 179 (471)
++.++++|||.|++.++.|++.+. + +.+.+ .+++.++ ..|++++++. +..
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~-~--------~~l~~--~~~~~~~------~~d~~~l~~~~~~i~~~~~a~~~~~~ 136 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV-G--------VSLSR--ANVRWFR------HNDMKDLRRVLEQVRAQDVALKRKPT 136 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH-H--------HHHcC--CeEEEeC------CCCHHHHHHHHHHhhhhccccccccC
Confidence 999999999999999988876532 1 12222 2333332 1244544443 321
Q ss_pred CCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---ccC----CCCCCCccEEEeCCCCcCCCCC
Q 012104 180 FRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QEA----ANPFEYCHIVTTTTHKSLRGPR 250 (471)
Q Consensus 180 ~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~~----~~p~~~aDiv~~s~~K~l~Gpr 250 (471)
.++++|++. .|+.|...|+++++++|+++|+++++|++|..|.... +.. ..|..++|++++|++|.+ ||.
T Consensus 137 ~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~ 215 (392)
T PLN03227 137 DQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSV 215 (392)
T ss_pred CCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hcc
Confidence 246777765 6788999999999999999999999999998664332 110 123347899999999985 799
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP-HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p-~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
||++++++ ++.+.+........+++. +....++...++..... -++..++..++.++|++.|
T Consensus 216 gg~v~~~~---------------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L 278 (392)
T PLN03227 216 GGMTVGSE---------------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTL 278 (392)
T ss_pred CcEEecCH---------------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHH
Confidence 99998876 444333322122223332 22222333335544322 2456778889999999999
Q ss_pred HcCCceEee---------CCCCCeeEEEEccCCCCC--------HHHHHHHHhhcCeEeccCC-cCCC-CCCCCCCeeEE
Q 012104 330 TGKGYSLVT---------GGTENHLVLWDLRPLGLT--------GNKVEKLCDLCNITVNKNA-VFGD-SSALAPGGVRI 390 (471)
Q Consensus 330 ~~~g~~i~~---------~~~~~~~~~v~~~~~~~~--------~~~~~~~L~~~gI~v~~~~-~p~~-~~~~~~~~iRi 390 (471)
++.++..+. ..+.++++.+.+.+...+ ..++.+.|.+.||.+.+.. .|.. .....+..||+
T Consensus 279 ~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~ 358 (392)
T PLN03227 279 TNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRV 358 (392)
T ss_pred HhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEE
Confidence 876554221 112355666666432111 2367788888999986421 0100 01112467999
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 391 GTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 391 g~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+++ +.+++|++++.+.|+++++.
T Consensus 359 ~~~~----~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 359 VANA----SHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred EecC----CCCHHHHHHHHHHHHHHHHH
Confidence 8744 45699999999999998865
No 77
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.7e-23 Score=209.71 Aligned_cols=334 Identities=16% Similarity=0.134 Sum_probs=212.0
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-H
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-S 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t 107 (471)
.+.++|..+... .++.+++++...+.+....+|+. ......+++...+++.+.+|.+.+.- -.|.+++| +
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~-~~i~vt~G~~ 107 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPP------FEGTASFRQAITDWYHRRYGVELDPD-SEALPLLGSK 107 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCC------CCCCHHHHHHHHHHHHHHHCCCcCCC-CeEEEccChH
Confidence 456777654322 34567777655553221123332 22223444444456666556532210 12444444 5
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||+|++.+|+|+++.. .+...| .++++++++++ ++.+|++++++.+. .++|+|+
T Consensus 108 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~ 175 (394)
T PRK05942 108 EGLTHLALAYVNPGDVVLVPSPAYPAHFR---------GPLIAG--AQIYPIILKPENDWLIDLSSIPEEVA-QQAKILY 175 (394)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcC--CEEEEeecCCccCCccCHHHHHHhcc-ccceEEE
Confidence 79999999999999999999999987642 112334 35566666643 46799999999886 4789888
Q ss_pred Ec--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC---C---CccEEEeCCCCc--CCCCCeEE
Q 012104 187 CG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E---YCHIVTTTTHKS--LRGPRAGM 253 (471)
Q Consensus 187 ~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~---~aDiv~~s~~K~--l~GprgG~ 253 (471)
++ +||+|..++ +++|.++|+++|++||+|++|. .+.+.+..+.++ + ...|++.|++|+ ++|.|.||
T Consensus 176 l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~ 254 (394)
T PRK05942 176 FNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGF 254 (394)
T ss_pred EcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheee
Confidence 54 789999998 5677788999999999999987 555443322222 2 223778999997 47889999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
+++++ ++.+.+.........+.+.. ...+...+++. .....++..+++.++.+.+.+.|.+.|
T Consensus 255 i~~~~---------------~l~~~l~~~~~~~~~~~~~~-~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~ 317 (394)
T PRK05942 255 VVGNR---------------HIIQGLRTLKTNLDYGIFSA-LQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGELG 317 (394)
T ss_pred eecCH---------------HHHHHHHHHHhhcccCCCHH-HHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99876 45555554322111122222 22333445542 223446667777788888999998888
Q ss_pred ceEeeCCCCCeeEEEEccCCCCCHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRPLGLTGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~~~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.+. .+.++.++|+++.. +++..++ .++|+++||.+.++..++. ...+++||++. .+.+++.+.|
T Consensus 318 ~~~~-~~~~~~f~~~~~~~-~~~~~~~~~~~l~~~gV~v~~g~~f~~---~~~~~iRis~~---------~~~~~l~~~l 383 (394)
T PRK05942 318 WNIP-PTKATMYLWVPCPV-GMGSTDFALNVLQKTGVVVTPGNAFGE---GGEGYVRISLI---------ADCDRLGEAL 383 (394)
T ss_pred Ceec-CCCeeeEEEEECCC-CCCHHHHHHHHHHHCCEEEeCChhhCc---CCCCeEEEEec---------CCHHHHHHHH
Confidence 8775 34556678998853 4566665 4577899999988765532 12479999983 1345666666
Q ss_pred HHH
Q 012104 413 HRA 415 (471)
Q Consensus 413 ~~~ 415 (471)
.++
T Consensus 384 ~~l 386 (394)
T PRK05942 384 DRL 386 (394)
T ss_pred HHH
Confidence 554
No 78
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.93 E-value=9e-24 Score=213.94 Aligned_cols=322 Identities=17% Similarity=0.154 Sum_probs=210.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pG 121 (471)
++++.++++...+.+.+ +..| ...+.+| +.+++++|+++ .|.++||+.|+.+++.++ ++||
T Consensus 8 ~~~~~~~~v~~~~~~~~--------~~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~G 69 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF--------LTQG-PTVPAFE----EALAEYVGAKY-----AVAFNSATSALHIACLALGVGPG 69 (380)
T ss_pred CCHHHHHHHHHHHhcCC--------ccCC-hhHHHHH----HHHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCC
Confidence 34555666666554432 1111 2344555 56888999876 355679999999999999 8999
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---CCCcEEEEcCCCCCccccH
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKLIICGGSAYPRDWDY 198 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~~pklIi~~~s~~g~~~d~ 198 (471)
|+|++++++|.++.. .+...| .+++.++++++++.+|++++++.+.+ .++++|+.. +++|...|+
T Consensus 70 d~Viv~~~~~~~~~~---------~~~~~G--~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~-~~~G~~~~~ 137 (380)
T TIGR03588 70 DRVWTTPITFVATAN---------CALYCG--AKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV-DFAGKSVDM 137 (380)
T ss_pred CEEEeCCcchHHHHH---------HHHHcC--CEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe-CCCCccCCH
Confidence 999999988765431 122234 46677777777788999999999973 367887754 357888999
Q ss_pred HHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchH
Q 012104 199 ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (471)
Q Consensus 199 ~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~ 276 (471)
++|.++|+++|++||+|++|+.|..+.+.......+.|+.++|+| |+++++.||+++++++ ++.
T Consensus 138 ~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~--------------~~~ 203 (380)
T TIGR03588 138 QAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDE--------------ELA 203 (380)
T ss_pred HHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEecCCCCcccccCceEEEECCH--------------HHH
Confidence 999999999999999999999886554422111125699999998 8898889999998764 333
Q ss_pred hhhhhcCCCC---------------------CCC-CCcHH-HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-
Q 012104 277 DKINFAVFPS---------------------LQG-GPHNH-QIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 277 ~~i~~~~~~~---------------------~~g-~p~~~-~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~- 332 (471)
+++......+ ..| ...+. ..+++ ++.++ ..+++..++..++++++.+.|.+.
T Consensus 204 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~--g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~ 279 (380)
T TIGR03588 204 ERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAAL--GLSQL--KKLDRFVAKRREIAARYDRLLKDLP 279 (380)
T ss_pred HHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3322110000 001 01111 12222 22232 246788888899999999999876
Q ss_pred CceEeeCC--C--CCeeEEEEccC-CCCCHHHHHHHHhhcCeEeccCCcCCCCCCC---------CC-------CeeEEe
Q 012104 333 GYSLVTGG--T--ENHLVLWDLRP-LGLTGNKVEKLCDLCNITVNKNAVFGDSSAL---------AP-------GGVRIG 391 (471)
Q Consensus 333 g~~i~~~~--~--~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~---------~~-------~~iRig 391 (471)
++.+.... . ..+...+.+.. .+.+.+++.+.|.+.||.++....|.+..|. .+ ..+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP 359 (380)
T TIGR03588 280 YFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLP 359 (380)
T ss_pred CccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcC
Confidence 34433221 1 12333444432 3567889999999999998865544321110 01 345554
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+ ...++++|++++++.|.+++
T Consensus 360 ~----~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 360 L----HPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred C----CCCCCHHHHHHHHHHHHHhC
Confidence 3 23467899999999998753
No 79
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.93 E-value=6.6e-23 Score=208.06 Aligned_cols=341 Identities=17% Similarity=0.092 Sum_probs=213.1
Q ss_pred cccccChHHHHHH---HHHHHhc-cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHH
Q 012104 11 SLETVDPEIHDLI---EKEKRRQ-CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (471)
Q Consensus 11 ~~~~~d~~~~~~~---~~e~~~~-~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~ 84 (471)
.+....+.....+ .++..++ .+.++|..+++. .++.+.+++...+.......|+. ......+.+...+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~ 80 (385)
T PRK09276 7 RIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS------YEGMLEFRKAVAD 80 (385)
T ss_pred HhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC------CCCcHHHHHHHHH
Confidence 3444445443333 2333333 356888777654 36788888876654321112332 1222344444445
Q ss_pred HHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC
Q 012104 85 RALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (471)
Q Consensus 85 ~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~ 163 (471)
++.+.+|.+.+.- -+|.+++| ++|+..++.++++|||+|++++|.|+.+.. .....| .+++.++++.
T Consensus 81 ~~~~~~g~~~~~~-~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~---------~~~~~g--~~~~~v~~~~ 148 (385)
T PRK09276 81 WYKRRFGVELDPE-TEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI---------GTIFAG--GEPYFMPLKE 148 (385)
T ss_pred HHHHHhCCCCCCC-CcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH---------HHHHcC--CEEEEEecCC
Confidence 5655556532210 13555555 579999999999999999999999876532 122334 3555555554
Q ss_pred C-CCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCC---CCC
Q 012104 164 S-TGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FEY 234 (471)
Q Consensus 164 ~-~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p---~~~ 234 (471)
+ ++.+|++++++.+. .++++|+++ +||+|..++. ++|.++|+++|++|++|++|. .+.+.+..+.+ ++.
T Consensus 149 ~~g~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 226 (385)
T PRK09276 149 ENGFLPDLDAIPEDVA-KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPG 226 (385)
T ss_pred CCCCcCCHHHHHHhcc-ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCC
Confidence 3 45689999988876 478888754 7899999986 566778899999999999997 55544322222 221
Q ss_pred ---ccEEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH
Q 012104 235 ---CHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP 309 (471)
Q Consensus 235 ---aDiv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~ 309 (471)
-.|++.|++|.+ +|.|.||+++++ ++.+.+......... ++......+.+.++... ..
T Consensus 227 ~~~~~i~~~S~SK~~g~~GlRiG~~i~~~---------------~l~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~~-~~ 289 (385)
T PRK09276 227 AKDVGIEFHSLSKTYNMTGWRIGFAVGNA---------------DLIAGLGKVKSNVDS-GVFQAIQEAGIAALNGP-QE 289 (385)
T ss_pred CcCCEEEEecchhhcCCcchhheeeeCCH---------------HHHHHHHHHHhhccC-CCCHHHHHHHHHHHcCc-HH
Confidence 237889999984 788999999876 455544432211111 22222223333344321 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCee
Q 012104 310 AFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGV 388 (471)
Q Consensus 310 ~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~i 388 (471)
.+++..+++.++++.+.+.|++.|+.+. .+.++.++|+++.+ +++..++.+. ++++||.+.++..++.. .++++
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~v~~~~-~~~~~~l~~~ll~~~gi~v~~g~~f~~~---~~~~~ 364 (385)
T PRK09276 290 VVEELRKIYQERRDILVEGLRKLGLEVE-PPKATFYVWAPVPK-GYTSAEFATLLLDKAGVVVTPGNGFGEY---GEGYF 364 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccc-CCCcceEEEEECCC-CCCHHHHHHHHHHhCCEEECCchhhCCC---CCCeE
Confidence 4566777778888999999998888764 34556778998853 5677777555 56789999887655321 24689
Q ss_pred EEecC
Q 012104 389 RIGTP 393 (471)
Q Consensus 389 Rig~~ 393 (471)
||++.
T Consensus 365 Ris~~ 369 (385)
T PRK09276 365 RIALT 369 (385)
T ss_pred EEEeC
Confidence 99983
No 80
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.93 E-value=3.6e-23 Score=208.17 Aligned_cols=322 Identities=13% Similarity=0.063 Sum_probs=206.4
Q ss_pred eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCC---C---CcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRY---Y---GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 35 ~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~---~---~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
.-|.+...+.+++++++.... .|+.+++. . .+...+.++ ++.+++++|++. .+.++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l----~~~la~~~g~~~-----i~~~~g~t~ 70 (361)
T cd06452 5 DPIQRGGRLTPEARKALIEWG-----DGYSVCDFCRGRLDEIEKPPIKDF----HHDLAEFLGMDE-----ARVTPGARE 70 (361)
T ss_pred ChhhcCCCCCHHHHHHHHHHh-----cccCCccccccccccccCchHHHH----HHHHHHHcCCce-----EEEeCCHHH
Confidence 335566778899999987654 22222221 0 111233344 467889999843 344566778
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhh------CC
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALD------FR 181 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~------~~ 181 (471)
|+.+++.++++|||+|++.++.|.+.+. .+...| .+++.++++++ ++.+|++++++.+.+ .+
T Consensus 71 al~~~l~~~~~~gd~Vl~~~~~~~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 139 (361)
T cd06452 71 GKFAVMHSLCEKGDWVVVDGLAHYTSYV---------AAERAG--LNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKP 139 (361)
T ss_pred HHHHHHHHhcCCCCEEEEcCCcchHHHH---------HHHhcC--CEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCC
Confidence 9999999999999999999877654421 122334 35555555533 358999999998863 26
Q ss_pred CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC-C-CccEEEeCCCCcCCC-CCeEEEEe
Q 012104 182 PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-YCHIVTTTTHKSLRG-PRAGMIFY 256 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~-~-~aDiv~~s~~K~l~G-prgG~i~~ 256 (471)
+++|++. +|++|...|+++|.++|+++|+++++|++|..|. .+.+. . ++|++++|+||++.+ +++|++++
T Consensus 140 ~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~-----~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~ 214 (361)
T cd06452 140 PALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGR-----MPVSGKELGADFIVGSGHKSMAASAPIGVLAT 214 (361)
T ss_pred ceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCC-----cCCCHHHcCCCEEEecCCccccCCCCeEEEEE
Confidence 7888754 5679999999999999999999999999997553 22222 2 589999999999754 46799988
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCC-------CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFP-------SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~-------~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
++ ++.+++.....+ ...+++....++++..+++.+. ... +..++..++++++++.|
T Consensus 215 ~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~-~~~-~~~~~~~~~~~~l~~~L 277 (361)
T cd06452 215 TE---------------EWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVK-ERV-KRWDEEVEKARWFVAEL 277 (361)
T ss_pred CH---------------HHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHH
Confidence 76 334443321111 1112232333334444554432 122 33444456778999999
Q ss_pred HcC-CceEeeCC-CCCeeEEEEccC-------CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 330 TGK-GYSLVTGG-TENHLVLWDLRP-------LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 330 ~~~-g~~i~~~~-~~~~~~~v~~~~-------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
++. |++++... ...+++.++... ...++.++.+.|.++||.+.. ++ ....+|+++ .|.
T Consensus 278 ~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~---~~-----~~~~~ri~~-----~g~ 344 (361)
T cd06452 278 EKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIK---PG-----LTRYFKLST-----YGL 344 (361)
T ss_pred hcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEc---CC-----CceEEEEEe-----cCC
Confidence 998 99886321 233455555431 012344688888888998532 11 235799986 345
Q ss_pred CHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAV 416 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l 416 (471)
+++|++++.++|.+++
T Consensus 345 ~~e~~~~l~~al~~~~ 360 (361)
T cd06452 345 TWEQVEYVVDAFKEIA 360 (361)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 6899999999997653
No 81
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=4.9e-24 Score=213.62 Aligned_cols=293 Identities=17% Similarity=0.147 Sum_probs=198.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 74 FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 74 ~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
...++| +.+++++|.+. .+.++||+.|+..++.++ ++|||+|+++.+.|.+... .+...|
T Consensus 19 ~~~~~~----~~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~---------~~~~~g- 79 (352)
T cd00616 19 KVREFE----KAFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATAN---------AILLLG- 79 (352)
T ss_pred HHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHH---------HHHHcC-
Confidence 344555 57888999754 355779999999999998 6999999999988765421 122233
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~ 232 (471)
.+++.++++++++.+|++++++.+. .++++|++. +++|...|+++|+++|+++|+++++|++|+.|....+. ++
T Consensus 80 -~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~v~~~-~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~ 153 (352)
T cd00616 80 -ATPVFVDIDPDTYNIDPELIEAAIT-PRTKAIIPV-HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KV 153 (352)
T ss_pred -CeEEEEecCCCcCCcCHHHHHHhcC-cCCeEEEEE-CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ec
Confidence 4666777775578999999999885 478888765 46899999999999999999999999999877654332 12
Q ss_pred C-CccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCC-----------CC-CCcH-HHH
Q 012104 233 E-YCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-----------QG-GPHN-HQI 296 (471)
Q Consensus 233 ~-~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-----------~g-~p~~-~~i 296 (471)
. .+|+.++|+| |+++++.||+++++++ ++.+++......+. .+ +..+ ...
T Consensus 154 ~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (352)
T cd00616 154 GTFGDAGAFSFHPTKNLTTGEGGAVVTNDE--------------ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQ 219 (352)
T ss_pred ccCcceeEEcCCCCCCCcccCceEEEECCH--------------HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHH
Confidence 2 3688888876 9998889999988763 33333322111110 00 0011 111
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC----CCeeEEEEccCC-CCCHHHHHHHHhhcCeE
Q 012104 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT----ENHLVLWDLRPL-GLTGNKVEKLCDLCNIT 370 (471)
Q Consensus 297 aa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~----~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~ 370 (471)
+++ ++.. ...+++..++..++++++.+.|.+. |++++.... ..+++.+.+... +.+..++.+.|.+.||.
T Consensus 220 aa~--~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~ 295 (352)
T cd00616 220 AAI--GLAQ--LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIE 295 (352)
T ss_pred HHH--HHHH--HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCC
Confidence 222 2221 2356777888899999999999985 888764322 123444455321 56888999999999998
Q ss_pred eccCCcCCCCCC------------C------CCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 371 VNKNAVFGDSSA------------L------APGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 371 v~~~~~p~~~~~------------~------~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
++....|....+ . ..+.+||++... ++++||+++++.|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~----~t~~di~~i~~~l~ 352 (352)
T cd00616 296 TRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPS----LTEEEIDRVIEALR 352 (352)
T ss_pred eeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCC----CCHHHHHHHHHHhC
Confidence 876544432111 0 025899987544 55899999998873
No 82
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2.2e-23 Score=212.95 Aligned_cols=351 Identities=14% Similarity=0.084 Sum_probs=218.6
Q ss_pred CCeeEe-cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 32 RGIELI-ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 32 ~~i~li-~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
+.+.|- .+-..+|+.|.+++...+.. |..+..+.++.+...+....+. . +++ +++|++.++ .+.+.|+|.++
T Consensus 27 ~~iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~-~l~g~~~~~---v~~~~~~t~~l 99 (406)
T TIGR01814 27 AVIYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWFTLDES-L-LKL-RLVGAKEDE---VVVMNTLTINL 99 (406)
T ss_pred CcEEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChhhhhhh-h-ccc-cccCCCCCc---EEEeCCchHHH
Confidence 346665 45556688999998766533 3222111222211222222222 2 335 799998653 35566778899
Q ss_pred HHHHHHhcCCCC---EEEEeCCCCCCcccccccccCCccceeccceeE--EEeeeecCCCCCCCHHHHHHHhhh--CCCc
Q 012104 111 FAAYTAVLEPHD---RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE--SLPYKVNSSTGYIDYDKLEEKALD--FRPK 183 (471)
Q Consensus 111 ~~~~~all~pGD---~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~--~~~~~v~~~~~~iD~~~le~~~~~--~~pk 183 (471)
..++.++++||+ .|++.+.+|++.+.. +. ..+...|..+. .+.++.+ .++.+|++++++.+.. .+++
T Consensus 100 ~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~-~~----~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 100 HLLLASFYKPTPKRYKILLEAKAFPSDHYA-IE----SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred HHHHHHhcCCcCCccEEEecCCCCChHHHH-HH----HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeE
Confidence 999998887753 577767776653210 00 00112233221 1233323 3478899999998752 4678
Q ss_pred EEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCeEEEEeeCC
Q 012104 184 LIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRAGMIFYRKG 259 (471)
Q Consensus 184 lIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~GprgG~i~~~~~ 259 (471)
+|++. .+.+|...|+++|.++|+++|+++++|++|++|.+ |..+. ++|++++|+||||.||.||.+++.++
T Consensus 174 lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~ 248 (406)
T TIGR01814 174 VILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-----PLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEK 248 (406)
T ss_pred EEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-----ccccccCCCCEEEEcCccccCCCCCeEEEEehh
Confidence 88765 56789999999999999999999999999987743 33343 78999999999987666665544332
Q ss_pred -C---CCCCCCCCCCc-c--cchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 260 -P---KPPKKGQPEGA-V--YDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 260 -~---~~~~~~~~~i~-~--~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
. .+...+..... . +...............|+|+...++++..|++.+...++++..++....++++.+.|++.
T Consensus 249 ~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 328 (406)
T TIGR01814 249 HAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKAR 328 (406)
T ss_pred hhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 11111110000 0 000000000000112478889999999999988766677888888889999999998774
Q ss_pred -----CceEeeCCC---CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEec-CCCCCcCCCHH
Q 012104 333 -----GYSLVTGGT---ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGT-PAMTSRGLLEK 403 (471)
Q Consensus 333 -----g~~i~~~~~---~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~-~~~t~~g~~~~ 403 (471)
|+++++... ...++.+.+. ++++++.+.|.++||.+... .++.||+|+ +.+++ ++
T Consensus 329 ~~~~~~~~i~~~~~~~~r~~~v~~~~~---~~~~~~~~~L~~~gi~v~~~---------~~~~iRiS~~~~~nt----~~ 392 (406)
T TIGR01814 329 CGGPPVLTIITPRDHAQRGCQLSLTHP---VPGKAVFQALIKRGVIGDKR---------EPSVIRVAPVPLYNT----FV 392 (406)
T ss_pred cCCCCceEEeCCCChhhcCCeEEEEec---CCHHHHHHHHHHCCEEEecc---------CCCeEEEechhccCC----HH
Confidence 477764321 1234444443 46788888899999987531 136899998 45654 89
Q ss_pred HHHHHHHHHHHHH
Q 012104 404 DFEQIGEFLHRAV 416 (471)
Q Consensus 404 d~~~l~~~i~~~l 416 (471)
|++++.+.|.+++
T Consensus 393 did~l~~~l~~~~ 405 (406)
T TIGR01814 393 DVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 83
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.1e-23 Score=206.87 Aligned_cols=318 Identities=15% Similarity=0.102 Sum_probs=213.3
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-H
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~ 108 (471)
..+.|..+++. +|+.+++++...+......+|+.. ....+ ++.++++++++.+ +|..++|+ +
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~-------~~~~l----r~~ia~~~~~~~~----~i~it~G~~~ 87 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDP-------TAEKL----REELARYCSVVPT----NIFVGNGSDE 87 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCc-------cHHHH----HHHHHHHhCCCcc----cEEEecCHHH
Confidence 45778777765 478999998765542222223221 12233 3567778888763 45556665 5
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE-
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC- 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~- 187 (471)
++..++.++++|||+|++.+|.|+++.. .....| .+++.++++ +++.+|++++++.+...++|+|++
T Consensus 88 ~l~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 88 IIHLIMLAFINKGDVVIYPHPSFAMYSV---------YSKIAG--AVEIPVKLK-EDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHH---------HHHHcC--CeEEEeecC-CCCCCCHHHHHHHhhccCCCEEEEe
Confidence 7889999999999999999998875431 112233 355566655 457899999999987668898874
Q ss_pred c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCc--cEEEeCCCCc--CCCCCeEEEEeeCCCCC
Q 012104 188 G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYC--HIVTTTTHKS--LRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~a--Div~~s~~K~--l~GprgG~i~~~~~~~~ 262 (471)
+ +||+|..++.+++.++|++++.++++|++|. ++. ....+..+... -|++.|++|+ ++|.|.||+++++
T Consensus 156 ~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~---- 229 (351)
T PRK14807 156 NPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE---- 229 (351)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH----
Confidence 4 7899999999999999999899999999996 542 22122222212 3889999999 4889999999876
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT 341 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~ 341 (471)
++.+.+.....+.. .+...+ .++..+++ ...+++..+++.++++.+.+.|++. |+.+. + .
T Consensus 230 -----------~~~~~~~~~~~~~~--~~~~~q-~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~-~ 290 (351)
T PRK14807 230 -----------NILKYLNLVKSPYN--INSLSQ-VIALKVLR---TGVLKERVNYILNERERLIKELSKIPGIKVY-P-S 290 (351)
T ss_pred -----------HHHHHHHHccCCCC--cCHHHH-HHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-c-C
Confidence 45555554332221 112222 22223333 2356667777778888899999775 77764 3 3
Q ss_pred CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 342 ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 342 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
++.++|+.+. +.+++.+.|.++||.|...... ...++++||++. ..++++++.+.|++++
T Consensus 291 ~~~~~~i~~~----~~~~~~~~l~~~gV~v~~~~~~----~~~~~~iRis~~-------~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 291 KTNFILVKFK----DADYVYQGLLERGILVRDFSKV----EGLEGALRITVS-------SCEANDYLINGLKELL 350 (351)
T ss_pred CccEEEEEcC----CHHHHHHHHHHCCEEEEECCCC----CCCCCeEEEEcC-------CHHHHHHHHHHHHHhh
Confidence 3556788874 4677888888899999753211 112478999973 2678999998887643
No 84
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.93 E-value=7.6e-24 Score=213.96 Aligned_cols=325 Identities=14% Similarity=0.144 Sum_probs=210.6
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCC
Q 012104 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEP 120 (471)
Q Consensus 42 ~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~p 120 (471)
.++++.++++...+.+.+. +.| ....++| +++++++|+++ .|.++|||.|+.+++.++ ++|
T Consensus 11 ~~~~~e~~~~~~~l~~~~~--------~~g-~~~~~le----~~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~ 72 (379)
T PRK11658 11 AMGDEELAAVKEVLRSGWI--------TTG-PKNQALE----QAFCQLTGNQH-----AIAVSSATAGMHITLMALGIGP 72 (379)
T ss_pred CCCHHHHHHHHHHHHcCCc--------cCC-HhHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCC
Confidence 3455556777666644331 112 3455666 57888999875 366789999999999999 899
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHH
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYAR 200 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~ 200 (471)
||+|++++++|.++.. .+...| .+++.++++++++.+|++++++.+.. ++|+|+.. +++|...|+++
T Consensus 73 Gd~Viv~~~~~~~~~~---------~~~~~G--~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~-~~~G~~~d~~~ 139 (379)
T PRK11658 73 GDEVITPSLTWVSTLN---------MIVLLG--ATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV-HYAGAPADLDA 139 (379)
T ss_pred CCEEEECCCcHHHHHH---------HHHHcC--CEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe-CCCCCcCCHHH
Confidence 9999999988876532 122334 46667777777778999999998864 78888744 35899999999
Q ss_pred HHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhh
Q 012104 201 FRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN 280 (471)
Q Consensus 201 i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~ 280 (471)
|.++|+++|++|++|++|+.|..+.|...... +.++++++.+|.+++++||+++++++ ++.+++.
T Consensus 140 i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~--------------~~~~~~~ 204 (379)
T PRK11658 140 IRAIGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD--------------ELADRLR 204 (379)
T ss_pred HHHHHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH--------------HHHHHHH
Confidence 99999999999999999998877655332222 34677777889999999999998753 3333332
Q ss_pred hcCCCCC--------------------CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC
Q 012104 281 FAVFPSL--------------------QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (471)
Q Consensus 281 ~~~~~~~--------------------~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~ 340 (471)
.....|. .|. +..+..+.+|+.......+++..++..++++.+.+.|.+.++..+..+
T Consensus 205 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~--n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~ 282 (379)
T PRK11658 205 SLKFHGLGVDAFDRQTQGRAPQAEVLTPGY--KYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLP 282 (379)
T ss_pred HHHHcCCCcchhhhhcccCCCcceeecccc--ccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCC
Confidence 1110000 010 011122233333333346778888889999999999987654322221
Q ss_pred C----CC-eeEEEEccC--CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCC---------CCee----E-EecCCCCCcC
Q 012104 341 T----EN-HLVLWDLRP--LGLTGNKVEKLCDLCNITVNKNAVFGDSSALA---------PGGV----R-IGTPAMTSRG 399 (471)
Q Consensus 341 ~----~~-~~~~v~~~~--~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~---------~~~i----R-ig~~~~t~~g 399 (471)
. .+ +++.+.+.. .+++.+++.+.|++.||.+.....|.+..+.. +..- | |++| ...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP--~~~~ 360 (379)
T PRK11658 283 AWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP--LFPD 360 (379)
T ss_pred CCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc--CCCC
Confidence 1 12 333344322 25678899999999999877544343221110 0000 1 2221 1245
Q ss_pred CCHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l 416 (471)
++++|++++++.|.+++
T Consensus 361 l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 361 MTDADVDRVITALQQIA 377 (379)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 78899999999888754
No 85
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=4.1e-23 Score=210.97 Aligned_cols=348 Identities=15% Similarity=0.061 Sum_probs=216.5
Q ss_pred hccCCeeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee
Q 012104 29 RQCRGIELIASEN-----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ 102 (471)
Q Consensus 29 ~~~~~i~li~s~n-----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~ 102 (471)
+.++.|+|..+++ + +++.+++++.+.+......+|... .....+++...+++.+.+|...+. .+|.
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~G~~~lr~~ia~~~~~~~g~~~~~--~~i~ 100 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPT------VGLPQARRAIAEYLSRDLPYKLSL--DDVF 100 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCC------CCCHHHHHHHHHHHHHhcCCCCCc--ccEE
Confidence 3457788877765 3 478899988876654322233211 112234433334555444543221 1343
Q ss_pred -cCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhC
Q 012104 103 -PYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDF 180 (471)
Q Consensus 103 -~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~ 180 (471)
++++++|+..++.++++|||+|++++|.|+.+.. .....| .+++.+++++ +++.+|++++++++..
T Consensus 101 ~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~i~~~~~~~~~~d~~~l~~~~~~- 168 (409)
T PLN02656 101 ITSGCTQAIDVALSMLARPGANILLPRPGFPIYEL---------CAAFRH--LEVRYVDLLPEKGWEVDLDAVEALADQ- 168 (409)
T ss_pred EeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHH---------HHHHcC--CEEEEEeCCCcCCCCCCHHHHHHHhcc-
Confidence 4455679999999999999999999999876531 112234 3455555543 3567999999998864
Q ss_pred CCcEEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CCc--cEEEeCCCCc--CCC
Q 012104 181 RPKLII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EYC--HIVTTTTHKS--LRG 248 (471)
Q Consensus 181 ~pklIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~a--Div~~s~~K~--l~G 248 (471)
++++|+ ++ +||+|..++ +++|.++|+++|++|++|++|. ++.+.+....++ ... =|++.|++|+ ++|
T Consensus 169 ~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pG 247 (409)
T PLN02656 169 NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYG-HLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPG 247 (409)
T ss_pred CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhh-hcccCCCCcccHHHhcccCcEEEEcccchhccCcc
Confidence 566554 55 689998874 6677889999999999999997 777655322232 111 2789999998 689
Q ss_pred CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 012104 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (471)
Q Consensus 249 prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~ 328 (471)
.|.||++++++-. .+..-++.+++...... . +++......+++.++.+.....+++..+++.++++.+.+.
T Consensus 248 lRiG~~i~~~~~~-------~~~~~~~~~~~~~~~~~-~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~ 318 (409)
T PLN02656 248 WRLGWFVTTDPSG-------SFRDPKIVERIKKYFDI-L-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDR 318 (409)
T ss_pred eeEEEEEEeCccc-------ccccHHHHHHHHHHHhh-h-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999853100 00000344444432221 1 2233333444444565322334677777888888899999
Q ss_pred HHcCC-ceEeeCCCCCeeEEEEccCC---CC-CHHH-HHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 329 LTGKG-YSLVTGGTENHLVLWDLRPL---GL-TGNK-VEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 329 L~~~g-~~i~~~~~~~~~~~v~~~~~---~~-~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
|++.+ +.....+.++.++|+++... ++ +..+ +.++|.+.||.+.++..++ .++++||++.. .+
T Consensus 319 L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg-----~~~~iRi~~~~------~~ 387 (409)
T PLN02656 319 IKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG-----LKNWLRITFAA------DP 387 (409)
T ss_pred HhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC-----CCCeEEEEeCC------CH
Confidence 98763 33222456677889987421 22 3434 5788899999999887664 24799999842 25
Q ss_pred HHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVT 417 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~ 417 (471)
+.+++..+.|.+++.
T Consensus 388 e~l~eal~rl~~~~~ 402 (409)
T PLN02656 388 SSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666655544
No 86
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=1.1e-23 Score=213.01 Aligned_cols=328 Identities=16% Similarity=0.100 Sum_probs=226.9
Q ss_pred CeeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 33 GIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 33 ~i~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
.+...+|.||+ .|+++++....+ .+|..|..++|...|. ....++| +.+++++|.+. .+..+||.
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE----~~LA~f~g~e~-----all~sSGy 172 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLE----SSLADLKKKED-----CLVCPTGF 172 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHH----HHHHHHHCCCc-----EEEECChH
Confidence 34456799997 689999887665 6787788888877776 5556677 57889999987 36678999
Q ss_pred HHHHHHHHHhc--------------CCCCEEEEeCCCCCCcccccccccCCccceeccc--eeEEEeeeecCCCCCCCHH
Q 012104 108 PANFAAYTAVL--------------EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI--YFESLPYKVNSSTGYIDYD 171 (471)
Q Consensus 108 ~A~~~~~~all--------------~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~--~~~~~~~~v~~~~~~iD~~ 171 (471)
.||.+++.+|. +++|.|+.....|.+.+. | +..+.. ..+++.| .+.|++
T Consensus 173 ~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d-G--------~~ls~~~~~a~~~~f------~HND~~ 237 (476)
T PLN02955 173 AANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID-G--------VRLAERQGNVEVFVY------RHCDMY 237 (476)
T ss_pred HHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH-H--------HHhccccCCceEEEe------CCCCHH
Confidence 99999999873 466788887766654331 1 111210 1344444 267999
Q ss_pred HHHHHhhhCC--CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---ccCC-CCC-CCccEEEeCC
Q 012104 172 KLEEKALDFR--PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QEAA-NPF-EYCHIVTTTT 242 (471)
Q Consensus 172 ~le~~~~~~~--pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~~~-~p~-~~aDiv~~s~ 242 (471)
+|+++++..+ .++|++. .|+.|...|+++|.++|+++|++|++|++|+.|.... |... ..+ +..||+++|+
T Consensus 238 ~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TL 317 (476)
T PLN02955 238 HLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTL 317 (476)
T ss_pred HHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeC
Confidence 9999986543 3566655 7889999999999999999999999999998776543 2111 111 2568999999
Q ss_pred CCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCc-HHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 012104 243 HKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPH-NHQIGALAVALKQASTPAFKAYAKQVKAN 321 (471)
Q Consensus 243 ~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~-~~~iaa~a~al~~~~~~~~~~~~~~~~~n 321 (471)
+|++ |-+||++++++ ++.+.+.....+...+++. ....++...+++.+..+ ...++++.+|
T Consensus 318 sKA~-G~~GGfi~gs~---------------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~--~~~r~~L~~n 379 (476)
T PLN02955 318 SKAA-GCHGGFIACSK---------------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKE--KWRRKAIWER 379 (476)
T ss_pred ccch-hccCceeecHH---------------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcC--HHHHHHHHHH
Confidence 9997 67899999987 4455554332233333333 33444444566655432 3466788889
Q ss_pred HHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 322 AVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 322 a~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
.+++++. .|+.+ .++++.+-+... .....+.+.|.+.||.|+....|.. |.....+||++++.. +
T Consensus 380 ~~~fr~~---~G~~~-----~sPI~pI~ig~~-~~a~~~~~~L~~~Gi~v~~i~yPtV--P~g~~rLRi~lsA~H----t 444 (476)
T PLN02955 380 VKEFKAL---SGVDI-----SSPIISLVVGNQ-EKALKASRYLLKSGFHVMAIRPPTV--PPNSCRLRVTLSAAH----T 444 (476)
T ss_pred HHHHHHh---cCCCC-----CCCEEEEEeCCH-HHHHHHHHHHHHCCCEEEEECCCCC--CCCCceEEEeeCCCC----C
Confidence 9888874 36654 245655554432 2345678899999999998766653 344578999986654 5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~ 418 (471)
++|++++.+.|.++...
T Consensus 445 ~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 445 TEDVKKLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 89999999999887544
No 87
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=1.2e-22 Score=206.98 Aligned_cols=341 Identities=15% Similarity=0.112 Sum_probs=212.5
Q ss_pred cCCeeEecCCC----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC
Q 012104 31 CRGIELIASEN----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (471)
Q Consensus 31 ~~~i~li~s~n----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s 105 (471)
.+.|+|..++. + .++.+.+++.+.+.+.. ..| +.......+++...+++.+.+|...+. -+|..++
T Consensus 30 ~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~~Y------~~~~g~~~lr~~ia~~~~~~~g~~~~~--~~i~it~ 100 (398)
T PRK08363 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-NYY------GPSEGLPELREAIVKREKRKNGVDITP--DDVRVTA 100 (398)
T ss_pred CCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-CCC------CCCCCcHHHHHHHHHHHHHhcCCCCCh--hhEEEeC
Confidence 35688876664 2 57888888877664321 112 212223345544445555545533222 1344444
Q ss_pred -hHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEee-eecCCCCCCCHHHHHHHhhhCCCc
Q 012104 106 -GSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSSTGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 106 -Gt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-~v~~~~~~iD~~~le~~~~~~~pk 183 (471)
+++|+.+++.++++|||+|++.+|+|.++.. .+...|. +.+.+ +++++++.+|++++++.+.. +++
T Consensus 101 G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~v~~~~~~~~~~~~d~~~l~~~~~~-~~~ 168 (398)
T PRK08363 101 AVTEALQLIFGALLDPGDEILIPGPSYPPYTG---------LVKFYGG--VPVEYRTIEEEGWQPDIDDIRKKITE-KTK 168 (398)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcCC--EEEEeccccccCCcCCHHHHHhhCCc-ceE
Confidence 5679999999999999999999999987642 1222332 34444 34545567999999998864 678
Q ss_pred EEEE-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCC--CCCc-c-EEEeCCCCc--CCCCCeE
Q 012104 184 LIIC-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--FEYC-H-IVTTTTHKS--LRGPRAG 252 (471)
Q Consensus 184 lIi~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p--~~~a-D-iv~~s~~K~--l~GprgG 252 (471)
+|++ + +||+|..++ +++|.++|+++|+++++|++|. .+.+.+...+. +... . +++.|++|+ ++|.|.|
T Consensus 169 ~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 247 (398)
T PRK08363 169 AIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLG 247 (398)
T ss_pred EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEE
Confidence 7764 4 789999987 6788889999999999999987 55554432221 1222 2 668999999 5889999
Q ss_pred EEEe--eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 253 MIFY--RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 253 ~i~~--~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
|+++ ++++ +. .+.+.+..... ...+.... ...+.+.++.. ....+++..+++.++.+.+.+.|+
T Consensus 248 ~~~~~~~~~~---------~~--~l~~~~~~~~~-~~~~~s~~-~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~ 313 (398)
T PRK08363 248 YIYFVDPEGK---------LA--EVREAIDKLAR-IRLCPNTP-AQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLN 313 (398)
T ss_pred EEEEeCcHHH---------HH--HHHHHHHHHhc-ccccCChH-HHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 9997 4321 00 12222221110 00111122 22233334543 233556777888888899999998
Q ss_pred cC-CceEeeCCCCCeeEEEEccCCC-CCHHH-HHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 331 GK-GYSLVTGGTENHLVLWDLRPLG-LTGNK-VEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 331 ~~-g~~i~~~~~~~~~~~v~~~~~~-~~~~~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
+. |+.+. .+.+++++|+.+.... .+..+ +.+.|.++||.+.++..++. ...+++||++. . .++++++
T Consensus 314 ~~~~~~~~-~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~---~~~~~iRis~~--~----~~~~l~~ 383 (398)
T PRK08363 314 EIPGISTT-KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGE---YGAGHFRLVFL--P----PVEILEE 383 (398)
T ss_pred cCCCCEec-CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCeEEEEec--C----CHHHHHH
Confidence 87 77763 4556777787775421 23344 46778999999988765542 12478999983 2 2567777
Q ss_pred HHHHHHHHHH
Q 012104 408 IGEFLHRAVT 417 (471)
Q Consensus 408 l~~~i~~~l~ 417 (471)
..+.|.+++.
T Consensus 384 ~l~~l~~~~~ 393 (398)
T PRK08363 384 AMDRFEEFMR 393 (398)
T ss_pred HHHHHHHHHH
Confidence 7777666554
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-23 Score=209.92 Aligned_cols=321 Identities=15% Similarity=0.117 Sum_probs=220.2
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.+.|..++|. +++.+++++.+.+......+|+.. | ..++ ++.+++++|.+.+ .+|..++|+
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~---~~~l----r~~ia~~~~~~~~---~~I~~t~G~~ 91 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----R---AAAL----KAALRAAMGVPAG---ADVLLGNGSD 91 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----C---HHHH----HHHHHHHhCcCCC---CcEEEcCCHH
Confidence 467888888874 578999999877643222344431 1 1223 3567788887643 245666776
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
+++..++.++++|||+|++.+|.|.++.. .+...| .+++.++++ +++.+|++++++.+...++++|++
T Consensus 92 ~~i~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g--~~~~~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l 159 (356)
T PRK04870 92 ELIQLLALACAKPGATVLAPEPGFVMYRM---------SAKLAG--LEFVGVPLT-ADFTLDLPAMLAAIAEHRPALVFL 159 (356)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCHHHHHH---------HHHHcC--CEEEEecCC-CCCCCCHHHHHHHhhcCCCCEEEE
Confidence 58888888999999999999998876532 122334 455666666 457899999999987668898874
Q ss_pred c--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-C-ccEEEeCCCCc-CCCCCeEEEEeeCCCCC
Q 012104 188 G--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-Y-CHIVTTTTHKS-LRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 188 ~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~-aDiv~~s~~K~-l~GprgG~i~~~~~~~~ 262 (471)
+ +||+|..++.+++.++++..++++|+|++|. .+......+ .+. . --+++.|++|. ++|.|.||+++++
T Consensus 160 ~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~---- 233 (356)
T PRK04870 160 AYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP---- 233 (356)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH----
Confidence 4 7899999999999999988899999999986 443221111 122 2 13889999996 6889999999876
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT 341 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~ 341 (471)
++.+.+.....+. + .......+...+++. ...+++..+++.++++.+.+.|++. |+.+. +.
T Consensus 234 -----------~~i~~~~~~~~~~--~-~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~~ 295 (356)
T PRK04870 234 -----------AWIAELDKVRPPY--N-VNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTVF--PS 295 (356)
T ss_pred -----------HHHHHHHHccCCC--c-CCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--CC
Confidence 4555555433222 1 122222222233432 2245677788888899999999887 77653 33
Q ss_pred CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 342 ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 342 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
++.++|+.+. +..++.+.|.++||.|.++..++. ..++++||++. ..++++++.+.|.++
T Consensus 296 ~~~~~~~~~~----~~~~~~~~l~~~gI~v~~~~~f~~---~~~~~iRis~~-------~~~~~~~l~~al~~~ 355 (356)
T PRK04870 296 AANFILVRVP----DAAAVFDGLKTRGVLVKNLSGMHP---LLANCLRVTVG-------TPEENAQFLAALKAA 355 (356)
T ss_pred CCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCC---CCCCeEEEeCC-------CHHHHHHHHHHHHHh
Confidence 4557888764 467788889999999987654431 23579999983 268999999998765
No 89
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.93 E-value=4.1e-23 Score=206.85 Aligned_cols=320 Identities=14% Similarity=0.088 Sum_probs=207.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pG 121 (471)
.++.+.+++.+.... ...|+. ......+++...+++.+.+|.+.+. +-+|.+++|+ +|+..++.++++||
T Consensus 14 ~~~~~~~~~~~~~~~--~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~Iiit~Gs~~ai~~~~~~~~~~g 84 (350)
T TIGR03537 14 TPPFIRKALIDAVPE--VSQYPS------ALGTKALREAISGWFERRFGVKLDP-DAQVLPSAGSKEAIFHFPLVFIDPE 84 (350)
T ss_pred CCHHHHHHHHHHHhc--cCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChHHHHHHHHHHHcCCC
Confidence 367888888765422 112332 1222345544456666666743221 0146666765 69999999999988
Q ss_pred ---CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCcc
Q 012104 122 ---DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIICG--GSAYPRD 195 (471)
Q Consensus 122 ---D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~ 195 (471)
|+|++++|.|.++.. .+...| .+++++++++ .++.+|++++++++.+ ++|+|+++ +||+|..
T Consensus 85 ~~~d~Vl~~~p~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~ 152 (350)
T TIGR03537 85 EDRRRVIFGTPGYPVYER---------GALFAG--GEPTAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTGAT 152 (350)
T ss_pred CCCceEEEcCCCCcchHH---------HHHhcC--CEEEEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcCcc
Confidence 699999999987653 123344 3556666653 3456899999998864 78988754 7899999
Q ss_pred cc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc--EEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCC
Q 012104 196 WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH--IVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQ 267 (471)
Q Consensus 196 ~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD--iv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~ 267 (471)
++ +++|.++|+++|+++|+|++|. .+.+.+..++... ..+ +++.|++|++ +|.|.|+++.++
T Consensus 153 ~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------- 222 (350)
T TIGR03537 153 APRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE--------- 222 (350)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH---------
Confidence 98 6777888999999999999986 3333332222111 122 7888999984 788999998765
Q ss_pred CCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEE
Q 012104 268 PEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVL 347 (471)
Q Consensus 268 ~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~ 347 (471)
++.+.+.....+...+.+...+.++ ..++.. ....++..+++.++.+.+.+.|.+.|+++. .+.++.++|
T Consensus 223 ------~~~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~-~~~g~~~~~ 292 (350)
T TIGR03537 223 ------KLISFLRKLRANFGVASPDFVQAAA-KAAWSD--DNHVLERRKIFKRKRDLFIEFFNKVGLEYL-YPDATFYLW 292 (350)
T ss_pred ------HHHHHHHHHHHhhccCCCHHHHHHH-HHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHCCCccc-CCCeEEEEE
Confidence 4555454432222223332222222 233321 234456677778888889999988888764 345677788
Q ss_pred EEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 348 WDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 348 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
++++. +.+..++.+.|.++||.+.++..++.. ..+++||++. . .++++++..+.+.
T Consensus 293 ~~~~~-~~~~~~l~~~L~~~gv~v~~g~~f~~~---~~~~~Ri~~~--~----~~~~~~~~l~~~~ 348 (350)
T TIGR03537 293 VKVPS-GIDAKDYALRLLENGIVVAPGENFGSG---EEGYVRVALV--P----TLEECEEALRLWE 348 (350)
T ss_pred EECCC-CCCHHHHHHHHHHCCEEEcCchhhCCC---CCCEEEEEec--C----CHHHHHHHHHHHh
Confidence 98854 457788888888899999987655421 2478999972 2 2567776666554
No 90
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-22 Score=205.77 Aligned_cols=337 Identities=17% Similarity=0.089 Sum_probs=216.4
Q ss_pred cCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 31 CRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 31 ~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
.+.++|..+++.. ++.+.+++...+.+.. ..|+. ......+++...+++.+.+|...+. +-.+.++++++
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~~~ 102 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTP------AAGIPELREAIAAKLKRDNGLDYDP-SQVIVTTGAKQ 102 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCC------CCChHHHHHHHHHHHHHHhCCCCCH-HHEEEeCCcHH
Confidence 4567777666443 5788888877664422 12322 2233455544445555555542211 01233445568
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
|+..++.+++++||+|++.+|.|+++.. .+...|. +++.+++++ +++.+|++++++.+. .++++|++
T Consensus 103 a~~~~~~~~~~~gd~vl~~~p~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~~ 170 (393)
T PRK05764 103 ALYNAFMALLDPGDEVIIPAPYWVSYPE---------MVKLAGG--VPVFVPTGEENGFKLTVEQLEAAIT-PKTKALIL 170 (393)
T ss_pred HHHHHHHHhcCCCCEEEecCCCCcchHH---------HHHHcCC--EEEEEecCcccCCcCCHHHHHHhhC-ccceEEEE
Confidence 9999999999999999999999887532 1223343 555566653 346799999999885 46787664
Q ss_pred -c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC-----C--CccEEEeCCCCc--CCCCCeEE
Q 012104 188 -G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-----E--YCHIVTTTTHKS--LRGPRAGM 253 (471)
Q Consensus 188 -~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~-----~--~aDiv~~s~~K~--l~GprgG~ 253 (471)
+ +||+|..++ +++|.++|+++|+++++|++|. .+.+.+..+.++ + ..++++.|++|+ ++|+|.|+
T Consensus 171 ~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ 249 (393)
T PRK05764 171 NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGY 249 (393)
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEE
Confidence 4 678998876 5677888999999999999986 555543221111 1 245899999999 47888999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~- 332 (471)
++.++ ++.+.+......... +++.....+...++.. ....+++..++..++++.+.+.|++.
T Consensus 250 i~~~~---------------~~~~~~~~~~~~~~~-~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 312 (393)
T PRK05764 250 AAGPK---------------ELIKAMSKLQSHSTS-NPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIP 312 (393)
T ss_pred EecCH---------------HHHHHHHHHHhhccc-CCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99876 455555433222211 2222222333334432 22345667777788888999999988
Q ss_pred CceEeeCCCCCeeEEEEccCC----CCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPL----GLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~----~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
|+.+. .+.++.++|+++... +.+..++. .+++++||.+.++..++. .+++||++. + .++++++
T Consensus 313 g~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----~~~vRis~~--~----~~~~~~~ 380 (393)
T PRK05764 313 GLECP-KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGA-----PGYVRLSYA--T----SLEDLEE 380 (393)
T ss_pred CCccc-CCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCC-----CCEEEEEec--C----CHHHHHH
Confidence 88874 456677788887542 11246664 455788999987754431 579999973 2 3788888
Q ss_pred HHHHHHHHHH
Q 012104 408 IGEFLHRAVT 417 (471)
Q Consensus 408 l~~~i~~~l~ 417 (471)
..+.|.++++
T Consensus 381 ~i~~l~~~~~ 390 (393)
T PRK05764 381 GLERIERFLE 390 (393)
T ss_pred HHHHHHHHHH
Confidence 8888877665
No 91
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=5.5e-23 Score=215.91 Aligned_cols=362 Identities=14% Similarity=0.111 Sum_probs=217.9
Q ss_pred cccccccChHHHHHHHHHHHhc----cCCeeEecCCC----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHH
Q 012104 9 NSSLETVDPEIHDLIEKEKRRQ----CRGIELIASEN----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIE 79 (471)
Q Consensus 9 ~~~~~~~d~~~~~~~~~e~~~~----~~~i~li~s~n----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE 79 (471)
++++..+.+.+...+..+.++. ++.|+|..++. + +|+.+++++...+... .+|+.. .....+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~Y~~~------~G~~~lR 191 (517)
T PRK13355 120 SHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDT--EGYSDS------KGLFSAR 191 (517)
T ss_pred hHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCC------cChHHHH
Confidence 4455555655554443333222 36788877543 2 3788888887665322 234432 2222333
Q ss_pred HHHHHHHHHhc--CCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEE
Q 012104 80 NLCRSRALQTF--HLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES 156 (471)
Q Consensus 80 ~~~~~~~~~lf--g~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~ 156 (471)
+...+++.+.. +++.+ +|..++|+ +++..++.++++|||+|++++|.|..+.. .+...| .++
T Consensus 192 eaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~---------~~~~~g--~~~ 256 (517)
T PRK13355 192 KAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA---------CVNLAG--GTA 256 (517)
T ss_pred HHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH---------HHHHCC--CEE
Confidence 22233343333 34432 45556665 68999999999999999999999987642 122334 355
Q ss_pred EeeeecCC-CCCCCHHHHHHHhhhCCCcEEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhcccc-CC
Q 012104 157 LPYKVNSS-TGYIDYDKLEEKALDFRPKLII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AA 229 (471)
Q Consensus 157 ~~~~v~~~-~~~iD~~~le~~~~~~~pklIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~ 229 (471)
+.++++++ ++.+|++++++.+. .++|+|+ ++ +||+|.+++ +++|.++|+++|++||+|++|. .+++.+. ++
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~-~~~~~~~~~~ 334 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYD-RLVMDGLEHT 334 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhh-hhcCCCCCcc
Confidence 56666644 47899999999886 4788775 55 789999998 5677788999999999999997 7766553 22
Q ss_pred CCCC-Ccc---EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHH
Q 012104 230 NPFE-YCH---IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 230 ~p~~-~aD---iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al 303 (471)
+... ..| +++.|++|+ ++|+|.||++++.+.. .+. ++.+.+....... .+ ++.....+...+|
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~-------~~~--~~~~~l~~~~~~~-~~-~~~~~q~a~~~aL 403 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKR-------IAK--DYIEGLNMLANMR-LC-SNVPAQSIVQTAL 403 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchh-------hHH--HHHHHHHHHhcCc-CC-cChHHHHHHHHHh
Confidence 2222 123 345899999 6899999998653100 000 1222232211111 12 2222223333445
Q ss_pred HHhc--cHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCC---CCH-HHHHHHHhhcCeEeccCCc
Q 012104 304 KQAS--TPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLG---LTG-NKVEKLCDLCNITVNKNAV 376 (471)
Q Consensus 304 ~~~~--~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~---~~~-~~~~~~L~~~gI~v~~~~~ 376 (471)
.... ...+.+ .++..++.+.+.+.|++. |+++. .+.+++++|+++.... .+. +.+.++|++.||.|.+++.
T Consensus 404 ~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~g~~~~-~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~ 481 (517)
T PRK13355 404 GGHQSVKDYLVP-GGRVYEQRELVYNALNAIPGISAV-KPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTG 481 (517)
T ss_pred cCCccHHHHHHH-HHHHHHHHHHHHHHHhcCCCcccC-CCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcch
Confidence 3211 111222 234556678888999887 88774 4567788888875321 133 3457889999999998876
Q ss_pred CCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 377 FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 377 p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
++.. .++++||++ .+ .++++++..+.|.+.+.
T Consensus 482 F~~~---~~~~~Ris~--~~----~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 482 FNWD---KPDHFRVVY--LP----RLEDLEDAMDRLADFFS 513 (517)
T ss_pred hCCC---CcCEEEEEe--CC----CHHHHHHHHHHHHHHHH
Confidence 6432 357999998 22 25566665555555443
No 92
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=1.9e-23 Score=201.26 Aligned_cols=303 Identities=21% Similarity=0.164 Sum_probs=199.1
Q ss_pred cccccccChHHHHHHHHHHHhccCCeeEecCC-CCC-cHHHHHHHhhhh----hccCCCCCCCCCCCCcchhHHHHHHHH
Q 012104 9 NSSLETVDPEIHDLIEKEKRRQCRGIELIASE-NFT-SFAVIEALGSAL----TNKYSEGMPGNRYYGGNEFIDEIENLC 82 (471)
Q Consensus 9 ~~~~~~~d~~~~~~~~~e~~~~~~~i~li~s~-n~~-s~~v~~a~~~~l----~~~~~~g~~~~r~~~g~~~~~~lE~~~ 82 (471)
++++....|.++..+.+-.......-.|-.+. ++. |..|.+++.... .++|.-| ||-.+.. +..
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~------~G~p~L~----~aL 78 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG------YGLPQLR----KAL 78 (420)
T ss_pred cccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc------CCchHHH----HHH
Confidence 46677888888888875443333222276665 444 556777776554 3444322 2222222 233
Q ss_pred HHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee-
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK- 160 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~- 160 (471)
++.+++++|.....- -+|..++|. +|+..++++++++||+|++.+|.|.++.. .+.+.|....+++..
T Consensus 79 ~k~~se~~~~~~~~~-~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~---------~~~maG~tpv~v~~~~ 148 (420)
T KOG0257|consen 79 AKAYSEFYGGLLDPD-DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP---------QVVMAGGTPVFVPLKP 148 (420)
T ss_pred HHHHHHHhccccCCc-ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh---------HHhhcCCcceeecccc
Confidence 466777777543221 235556665 79999999999999999999999987753 234555433333332
Q ss_pred ----ecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhcccc-CCC
Q 012104 161 ----VNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AAN 230 (471)
Q Consensus 161 ----v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~ 230 (471)
+...++.+|.+++|.++. .|+|+|+++ +||+|...+ +++|++||++||+++|.|++|. -+++.|. ++.
T Consensus 149 ~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe-~~v~d~~~h~r 226 (420)
T KOG0257|consen 149 KEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYE-WLVYDGNKHIR 226 (420)
T ss_pred ccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhH-HHhhCCCccee
Confidence 124578999999999997 489988754 899998886 4577899999999999999997 6677664 332
Q ss_pred C--CCC---ccEEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhh-cCCCCCCCCCcHHHHHHHHHH
Q 012104 231 P--FEY---CHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-AVFPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 231 p--~~~---aDiv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~-~~~~~~~g~p~~~~iaa~a~a 302 (471)
. +++ --+-++|++|+ +.|||.||+++++.+. .....+.. ..|+ .++|... |.+.|
T Consensus 227 ~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~------------~~~~~vh~~~~~~--~~Tp~q~---A~a~a 289 (420)
T KOG0257|consen 227 IASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLY------------SALFPVHQNFVFT--CPTPIQE---ASAAA 289 (420)
T ss_pred eecCCchhheEEEeccccceeeeeeeeeeeeechHHhh------------hhHHHHhhccccc--cCcHHHH---HHHHH
Confidence 1 232 23779999999 7899999999966320 11112222 2221 1233222 22223
Q ss_pred HHHhc---cH---HH-HHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEcc
Q 012104 303 LKQAS---TP---AF-KAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (471)
Q Consensus 303 l~~~~---~~---~~-~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~ 351 (471)
+.... ++ .+ .++.+.+.++.+.|.+.|.+.|+++ .++.+++++|+|++
T Consensus 290 ~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v-~~p~gayyl~adfs 344 (420)
T KOG0257|consen 290 FALELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKV-TGPEGAYYLWADFS 344 (420)
T ss_pred HhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCceEEEEecc
Confidence 32221 11 33 4488889999999999999999998 46788899999997
No 93
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=3.4e-23 Score=211.48 Aligned_cols=340 Identities=17% Similarity=0.197 Sum_probs=216.1
Q ss_pred cCCCCCcHHHHHHHhhhhh--ccCCCCCCCCCCCC-cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 38 ASENFTSFAVIEALGSALT--NKYSEGMPGNRYYG-GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~--~~~~~g~~~~r~~~-g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
++...++++|++++...+. +.+ +.++.+-+. +....+.++ .+++++++++|+++++ .+.++|||+|+..++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~---v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPRE---IVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCe---EEEeCCHHHHHHHHH
Confidence 4556778999999988775 444 333322111 111112333 3567899999998642 355677888998888
Q ss_pred HHh----cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--
Q 012104 115 TAV----LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-- 188 (471)
Q Consensus 115 ~al----l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-- 188 (471)
.++ +++||+|++.+++|++..... ..+...| .+++.++++ +++.+|+++|++++.+ ++++|++.
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~------~~~~~~g--~~~~~v~~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 153 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTC------RQLEREG--FEVTYLDPQ-SNGIIDLEKLEAAMRD-DTILVSIMHV 153 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHH------HHHHhCC--CEEEEEccC-CCCcCCHHHHHHhcCC-CCEEEEEECc
Confidence 776 489999999998876543211 0111123 345555556 4688999999999864 78888754
Q ss_pred CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCC
Q 012104 189 GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPK 264 (471)
Q Consensus 189 ~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~ 264 (471)
+|++|...|+++|.++|+++|+++++|++|++|.. +.++. ++|++++|+||.+ ||.| |+++++++.. ...
T Consensus 154 ~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~~~~ 227 (404)
T PRK14012 154 NNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKLKVDLMSFSAHKIY-GPKGIGALYVRRKPRVRLE 227 (404)
T ss_pred CCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccCCCCEEEEehhhcc-CCCceEEEEEecCCCCCCC
Confidence 67899999999999999999999999999986532 22232 6899999999954 7765 7777766421 000
Q ss_pred CCCCCCcccchHhhhhhc-CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCC-
Q 012104 265 KGQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGT- 341 (471)
Q Consensus 265 ~~~~~i~~~~l~~~i~~~-~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~- 341 (471)
+ .+ .... ......|++....+.++..|++.... +..+..++....++++.+.|++. ++.++....
T Consensus 228 ~--------~~---~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~ 295 (404)
T PRK14012 228 A--------QM---HGGGHERGMRSGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQ 295 (404)
T ss_pred c--------ee---cCCCccCCccCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccc
Confidence 0 00 0000 00012356677777788777776543 56667778888888999998875 566542211
Q ss_pred -CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCc--CCCC------------CCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 342 -ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV--FGDS------------SALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 342 -~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~--p~~~------------~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
..+..++.+.. ++.+++...|+ ++.|..+.. |... .....+.|||++...+ +++|++
T Consensus 296 ~~~~~~~~~~~~--~~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~----t~~dvd 367 (404)
T PRK14012 296 RVPGNLNVSFNY--VEGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFT----TEEEID 367 (404)
T ss_pred cCCCEEEEEEeC--cCHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCC----CHHHHH
Confidence 12222233221 23456666675 455444422 2110 0112478999997665 489999
Q ss_pred HHHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTLT 419 (471)
Q Consensus 407 ~l~~~i~~~l~~~ 419 (471)
++.+.|+++++..
T Consensus 368 ~~~~~l~~~~~~~ 380 (404)
T PRK14012 368 YAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987653
No 94
>PRK07324 transaminase; Validated
Probab=99.93 E-value=1.6e-23 Score=211.48 Aligned_cols=287 Identities=17% Similarity=0.144 Sum_probs=187.4
Q ss_pred HHHHHhcC-CCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec
Q 012104 84 SRALQTFH-LDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (471)
Q Consensus 84 ~~~~~lfg-~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~ 162 (471)
+.++++++ .+.+. .+.++++++|+.+++.++++|||+|++..|.|+++.. .+...| .+++.++++
T Consensus 69 ~~ia~~~~~~~~~~---vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---------~~~~~g--~~v~~v~~~ 134 (373)
T PRK07324 69 EAVASLYQNVKPEN---ILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYD---------IPESLG--AEVDYWQLK 134 (373)
T ss_pred HHHHHHhcCCChhh---EEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH---------HHHHcC--CEEEEEecc
Confidence 44556654 44431 2344555689999999999999999999998876532 122334 355566666
Q ss_pred CC-CCCCCHHHHHHHhhhCCCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCC--
Q 012104 163 SS-TGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEY-- 234 (471)
Q Consensus 163 ~~-~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~-- 234 (471)
++ ++.+|++++++.+. .++|+|+++ +||+|..++ +++|.++|+++|++|++|++|. ++.+.+..++....
T Consensus 135 ~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~s~~~~~~ 212 (373)
T PRK07324 135 EENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYR-PLDEDGSTPSIADLYE 212 (373)
T ss_pred cccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCCChhhccC
Confidence 43 35689999998876 478988754 789999998 7788889999999999999986 66665433333332
Q ss_pred ccEEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 235 CHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 235 aDiv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
-.|++.|++|+ ++|+|.||+++++ ++.+.+.+.......+.+...+.++. .+++.. ....+
T Consensus 213 ~~I~~~s~SK~~~~~G~RiG~i~~~~---------------~li~~~~~~~~~~~~~~~~~~q~~a~-~~l~~~-~~~l~ 275 (373)
T PRK07324 213 KGISTNSMSKTYSLPGIRVGWIAANE---------------EVIDILRKYRDYTMICAGVFDDMLAS-LALEHR-DAILE 275 (373)
T ss_pred CEEEEecchhhcCCccceeEEEecCH---------------HHHHHHHHHhCcEEecCChHHHHHHH-HHHcCH-HHHHH
Confidence 23888999998 5799999999975 55555554332222223333333332 234321 22345
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEE
Q 012104 313 AYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRI 390 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 390 (471)
+..+.+.++.+.+.+.|.+. ++..+. +..+..+|+.+.. +++..++. ++|++.||.+.++..++. ++++||
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~~~~i~~~~-~~~~~~~~~~ll~~~gv~v~pg~~F~~-----~~~iRi 348 (373)
T PRK07324 276 RNRKIVRTNLAILDEWVAKEPRVSYVK-PKAVSTSFVKLDV-DMPSEDFCLKLLKETGVLLVPGNRFDL-----EGHVRI 348 (373)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEC-CCceEEEEEEeCC-CCCHHHHHHHHHHhcCEEEECccccCC-----CCeEEE
Confidence 56666777888888888876 666543 3444455666543 35666664 556789999998876542 469999
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 391 GTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 391 g~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
++. ++ ++.+++-.+.|.+.+
T Consensus 349 s~~--~~----~~~l~~~l~rl~~~l 368 (373)
T PRK07324 349 GYC--CD----TETLKKGLKKLSEFL 368 (373)
T ss_pred Eec--CC----HHHHHHHHHHHHHHH
Confidence 983 22 444444444444443
No 95
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=1.7e-22 Score=206.11 Aligned_cols=339 Identities=18% Similarity=0.077 Sum_probs=211.8
Q ss_pred ccCCeeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC----CCCCCce
Q 012104 30 QCRGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL----DPTQWGV 99 (471)
Q Consensus 30 ~~~~i~li~s~n------~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~----~~~~~~~ 99 (471)
..+.++|..++. .+++.+++++...+......+|+.. .....+ ++.++++++. ..... -
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~------~g~~~l----r~~ia~~l~~~~~~~~~~~-~ 98 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPS------VGALAA----REAVAEYLSSDLPGKLTAD-D 98 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCC------CCCHHH----HHHHHHHHHhhcCCCCCHH-H
Confidence 457788876653 3578899998877754433334221 112223 2344555553 11111 1
Q ss_pred eeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhh
Q 012104 100 NVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKAL 178 (471)
Q Consensus 100 ~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~ 178 (471)
.+.++++++|+.+++.+++++||+|++.+|+|+++.. .+...| .+++.+++++ +++.+|++++++++.
T Consensus 99 ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~d~~~l~~~~~ 167 (403)
T TIGR01265 99 VVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDT---------RAAFSG--LEVRLYDLLPEKDWEIDLDGLEALAD 167 (403)
T ss_pred EEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH---------HHHHcC--CEEEEecCCcccCCccCHHHHHHHhC
Confidence 2345556789999999999999999999998875421 112234 3445555543 356899999999886
Q ss_pred hCCCcEEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----Ccc-EEEeCCCCc--C
Q 012104 179 DFRPKLII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKS--L 246 (471)
Q Consensus 179 ~~~pklIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aD-iv~~s~~K~--l 246 (471)
. ++++|+ ++ +||+|..++ +++|.++|+++|+++++|++|. .+.+.+....++. ... |+++|++|+ +
T Consensus 168 ~-~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (403)
T TIGR01265 168 E-KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYG-HMVFGDAPFIPMASFASIVPVLSLGGISKRWVV 245 (403)
T ss_pred c-CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence 4 567665 44 688999987 6778889999999999999997 6665542212221 112 788999998 6
Q ss_pred CCCCeEEEEeeCC--CCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 012104 247 RGPRAGMIFYRKG--PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVA 324 (471)
Q Consensus 247 ~GprgG~i~~~~~--~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~ 324 (471)
+|.|.||++++++ +.. -.+.+.+....... . +++.....+++.++.......+++..+++.++++.
T Consensus 246 pGlRiG~~v~~~~~~~~~----------~~~~~~~~~~~~~~-~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 313 (403)
T TIGR01265 246 PGWRLGWIIIHDPHGIFR----------DTVLQGLKNLLQRI-L-GPATIVQGALPDILENTPQEFFDGKISVLKSNAEL 313 (403)
T ss_pred CcceEEEEEEeCchhhhH----------HHHHHHHHHHhhhh-c-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 8999999998532 100 01233333221111 1 23333334444455442233457777888888999
Q ss_pred HHHHHHcC-CceEeeCCCCCeeEEEEccCCC----CCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 325 LGNYLTGK-GYSLVTGGTENHLVLWDLRPLG----LTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 325 l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~----~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
+.+.|+.. |+.+. .+.++.++|++++... .+..++. +++++.||.+.++..++ ..+++||++..
T Consensus 314 l~~~L~~~~~~~~~-~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~-----~~~~iRis~~~---- 383 (403)
T TIGR01265 314 CYEELKDIPGLVCP-KPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG-----LPNWVRITITV---- 383 (403)
T ss_pred HHHHHhcCCCceec-CCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC-----CCCeEEEEecC----
Confidence 99999887 77653 4566778899875321 2556664 44688999998887654 24789999832
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l 416 (471)
.++.+++..+.|.+++
T Consensus 384 --~~~~l~~~l~~l~~~~ 399 (403)
T TIGR01265 384 --PESMLEEACSRIKEFC 399 (403)
T ss_pred --CHHHHHHHHHHHHHHH
Confidence 2445555555554444
No 96
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.92 E-value=5.2e-23 Score=210.16 Aligned_cols=345 Identities=15% Similarity=0.098 Sum_probs=210.1
Q ss_pred ccCCeeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeec
Q 012104 30 QCRGIELIASEN-----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP 103 (471)
Q Consensus 30 ~~~~i~li~s~n-----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~ 103 (471)
+++.|+|..++. + +++.+++++...+......+|+.. .|. ..+.+...+++.+.+|.+.+. -+|..
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~---~G~---~~lr~aia~~~~~~~g~~~~~--~~I~i 102 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPT---GGI---LPARRAIADYLSNDLPYQLSP--DDVYL 102 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC---CCC---HHHHHHHHHHHHhhcCCCCCH--hhEEE
Confidence 356788876653 3 467888888776653322223211 121 223333334444444432211 23444
Q ss_pred CCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCC
Q 012104 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFR 181 (471)
Q Consensus 104 ~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~ 181 (471)
++| ++|+..++.++++|||.|++.+|.|+++.. .+...|. +++.+++++ +++.+|++++++++.. +
T Consensus 103 t~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~~~~-~ 170 (409)
T PLN00143 103 TLGCKHAAEIIIKVLARPEANILLPRPGFPDVET---------YAIFHHL--EIRHFDLLPEKGWEVDLDAVEAIADE-N 170 (409)
T ss_pred ecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHH---------HHHHcCC--EEEEEeccCCCCCcCCHHHHHHhccc-C
Confidence 555 579999999999999999999999987642 1223343 445555542 3467999999998764 4
Q ss_pred Cc-EEEEc-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCCC---Ccc--EEEeCCCCc--CCCC
Q 012104 182 PK-LIICG-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---YCH--IVTTTTHKS--LRGP 249 (471)
Q Consensus 182 pk-lIi~~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~---~aD--iv~~s~~K~--l~Gp 249 (471)
++ +++++ +||+|..++. ++|.++|+++|++||+|++|. .+++.+....++. ..+ |++.|++|+ ++|.
T Consensus 171 ~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl 249 (409)
T PLN00143 171 TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYG-HIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW 249 (409)
T ss_pred CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEcccc-ccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc
Confidence 55 44566 7899999985 466678999999999999997 7766543222322 112 789999999 7899
Q ss_pred CeEEEEeeCC--CCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKG--PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (471)
Q Consensus 250 rgG~i~~~~~--~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~ 327 (471)
|.||++++++ +... ....+.+.....+... .+. ...++.+.++.......+++..+++.++.+.+.+
T Consensus 250 RvG~~v~~~p~~~~~~---------~~~~~~~~~~~~~~~~-~~~-~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 318 (409)
T PLN00143 250 GLGWLVTCDPSGLLQI---------CEIADSIKKALNPAPF-PPT-FIQAAIPEILEKTTEDFFSKTINILRAALAFCYD 318 (409)
T ss_pred ceEEEEeeCchhhhhh---------HHHHHHHHHHHhccCC-CCc-hHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999998432 1000 0112223322222111 122 2223333344321123567778888888888999
Q ss_pred HHHcCCceE-eeCCCCCeeEEEEccCC---CC-CHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 328 YLTGKGYSL-VTGGTENHLVLWDLRPL---GL-TGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 328 ~L~~~g~~i-~~~~~~~~~~~v~~~~~---~~-~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
.|.+.+... ...+.++.++|++++.. ++ +..++ .+++.+.||.+.++..++ ..+++||++. ++
T Consensus 319 ~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----~~~~iRi~~~--~~---- 387 (409)
T PLN00143 319 KLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG-----LKNWLRITFA--VE---- 387 (409)
T ss_pred HHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC-----CCCeEEEEEc--CC----
Confidence 998764322 23445678899998631 22 34444 577789999999887653 2479999983 22
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVT 417 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~ 417 (471)
++++++..+.|.++++
T Consensus 388 ~~~l~~al~rl~~~l~ 403 (409)
T PLN00143 388 QSSLEDGLGRLKSFCG 403 (409)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566555555555543
No 97
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=4e-23 Score=210.80 Aligned_cols=329 Identities=20% Similarity=0.186 Sum_probs=214.1
Q ss_pred EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 36 LIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 36 li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
...|.||+ +|+|++++...+. +|..|..+.|...| .+...++| +++++++|.+. .+.++||+.||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an 118 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHETLD-KYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN 118 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHHHHH-HcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence 45688886 6899999987764 45555556664434 33444555 67888999654 46688999999
Q ss_pred HHHHHHhcC--CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC---CCcEE
Q 012104 111 FAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RPKLI 185 (471)
Q Consensus 111 ~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~---~pklI 185 (471)
..++..+.. +||.|+.....|+.... .+...+. ....++ ..|++++++++... ++++|
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~v 181 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIE---------GIRHSGA--EKFIFR------HNDVAHLEKLLQSVDPNRPKII 181 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHH---------HHHHcCC--eEEEEC------CCCHHHHHHHHHhccCCCCeEE
Confidence 999988865 78888776555433221 1122332 222221 34788888887632 46777
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---ccCC-CCC-CCccEEEeCCCCcCCCCCeEEEEeeC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QEAA-NPF-EYCHIVTTTTHKSLRGPRAGMIFYRK 258 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~~~-~p~-~~aDiv~~s~~K~l~GprgG~i~~~~ 258 (471)
++. .|++|...|+++|+++|+++|+++++|++|+.|+... |... ..+ ...|++++|++|++. .-||++++++
T Consensus 182 ~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i~~~~ 260 (402)
T TIGR01821 182 AFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYIAASR 260 (402)
T ss_pred EEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCceeecCH
Confidence 754 6889999999999999999999999999998775432 1110 111 246899999999984 4568888776
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
++.+.+.....+. +.++.+...+++...+++.+... ....++..++++++.+.|++.|++++
T Consensus 261 ---------------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~ 323 (402)
T TIGR01821 261 ---------------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI 323 (402)
T ss_pred ---------------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 4444443221111 12233333444444567654432 34455667889999999998898865
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.+ .++++.+.+.. ..+..++.+.| ++.||.+.+...|.. +...+.+||+++... +++|++++.+.|.+++
T Consensus 324 ~~--~~~i~~i~~~~-~~~a~~~~~~L~~~~Gi~v~~~~~p~~--~~g~~~lRis~~~~~----t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 324 PN--PSHIVPVIIGD-AALCKKVSDLLLNKHGIYVQPINYPTV--PRGTERLRITPTPAH----TDKMIDDLVEALLLVW 394 (402)
T ss_pred CC--CCCEEEEEeCC-HHHHHHHHHHHHhcCCEEEEeECCCCC--CCCCceEEEEeCCCC----CHHHHHHHHHHHHHHH
Confidence 32 34555554432 11244566665 567999987554432 223468999987654 4899999999998877
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
+.
T Consensus 395 ~~ 396 (402)
T TIGR01821 395 DR 396 (402)
T ss_pred HH
Confidence 54
No 98
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=4.2e-23 Score=211.16 Aligned_cols=329 Identities=18% Similarity=0.140 Sum_probs=212.7
Q ss_pred EecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 36 LIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 36 li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
...|.||. +|.|++++...+ .+|..|..+.|.+.|. +...++| +++++++|.+. .+.++||+.||
T Consensus 50 ~~~sn~yl~l~~~p~v~~a~~~~~-~~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~ 119 (410)
T PRK13392 50 IWCSNDYLGMGQHPDVIGAMVDAL-DRYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSN 119 (410)
T ss_pred EEECCCccCCCCCHHHHHHHHHHH-HHcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHH
Confidence 34567664 689999997766 3454444455544333 3444555 67889999754 46678999999
Q ss_pred HHHHHHhc--CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---CCCcEE
Q 012104 111 FAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKLI 185 (471)
Q Consensus 111 ~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~~pklI 185 (471)
..++..+. .|||.|++..+.|++.+. .+...|..+ ..++ ..|++.+++.+.. .++++|
T Consensus 120 ~~~i~~l~~~~~g~~vi~~~~~h~s~~~---------~~~~~g~~~--~~~~------~~d~~~l~~~l~~~~~~~t~~v 182 (410)
T PRK13392 120 DAALSTLGKLLPGCVILSDALNHASMIE---------GIRRSGAEK--QVFR------HNDLADLEEQLASVDPDRPKLI 182 (410)
T ss_pred HHHHHHHhcCCCCCEEEEehhhhHHHHH---------HHHHcCCeE--EEEe------CCCHHHHHHHHHhccCCCCEEE
Confidence 99998775 489988887666554321 122334322 2222 1256666666542 367877
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc-C---CCCCCCccEEEeCCCCcCCCCCeEEEEeeC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE-A---ANPFEYCHIVTTTTHKSLRGPRAGMIFYRK 258 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~-~---~~p~~~aDiv~~s~~K~l~GprgG~i~~~~ 258 (471)
++. +|++|...|+++|.++|+++|+++++|++|..|+... |. . +...+..|++++|++|++.+ -||++++++
T Consensus 183 ~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~ 261 (410)
T PRK13392 183 AFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA 261 (410)
T ss_pred EEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH
Confidence 654 7889999999999999999999999999998776421 11 1 11123568999999999855 468888765
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
++.+.+.+...+.. .++.....+++...+|+.... .....+++.++++++.+.|++.|+++.
T Consensus 262 ---------------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~~ 324 (410)
T PRK13392 262 ---------------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNANGIPVM 324 (410)
T ss_pred ---------------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 45554443222211 222233344555567765432 334556778889999999998898874
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
. ..++++.+.+.. ..+..++.+.| +++||.+.+...|.. +...+.+||+++...+ ++|++++.+.|.+++
T Consensus 325 ~--~~~~~~~i~~~~-~~~~~~~~~~L~~~~GI~v~~~~~p~~--~~~~~~lRis~~~~~t----~edid~l~~aL~~~~ 395 (410)
T PRK13392 325 P--SPSHIVPVMVGD-PTLCKAISDRLMSEHGIYIQPINYPTV--PRGTERLRITPTPLHD----DEDIDALVAALVAIW 395 (410)
T ss_pred C--CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeeCCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHHH
Confidence 2 234454444431 12345676655 678999987654432 2234689999866544 799999999998876
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
+.
T Consensus 396 ~~ 397 (410)
T PRK13392 396 DR 397 (410)
T ss_pred HH
Confidence 54
No 99
>PRK06855 aminotransferase; Validated
Probab=99.92 E-value=1.9e-22 Score=207.44 Aligned_cols=348 Identities=15% Similarity=0.086 Sum_probs=210.9
Q ss_pred CCeeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n-----~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
+.+.|..++. .+|+.+.+++...+.+....+|+.. .....+.+...+++++.+|.+.+. -+|+.++|
T Consensus 33 ~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~------~G~~~LReaia~~~~~~~g~~~~~--~~I~it~G 104 (433)
T PRK06855 33 KITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPT------KGVLETREFLAELNNKRGGAQITP--DDIIFFNG 104 (433)
T ss_pred cccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCC------CCCHHHHHHHHHHHHhccCCCCCH--hHEEEcCc
Confidence 4567754443 3467778787766533211223221 122234333445666655654321 24555666
Q ss_pred H-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhh-CCCc
Q 012104 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALD-FRPK 183 (471)
Q Consensus 107 t-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~-~~pk 183 (471)
+ +|+..++. +++|||.|++.+|.|+++.. ......+.+.+.+++++ +++.+|+++|++.+.. .+++
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~----------~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSS----------AEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIA 173 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHH----------HHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCce
Confidence 5 68877774 88999999999999987532 11112234556666664 3467999999999864 2456
Q ss_pred EEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhccccCCCCCC----C-ccEEEeCCCCcC--CCCCe
Q 012104 184 LII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQEAANPFE----Y-CHIVTTTTHKSL--RGPRA 251 (471)
Q Consensus 184 lIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~-aDiv~~s~~K~l--~Gprg 251 (471)
+++ ++ +||+|.+++.++ |.++|+++|++||+|++|. .+.+.+..+.++. . --|++.|++|++ +|.|.
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~-~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRi 252 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYN-NIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRC 252 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-ccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceE
Confidence 555 55 789999998764 5577899999999999997 7776553222221 1 238899999994 89999
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHH
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS-TPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~-~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
||++++..... ..+. .+.+.+....... .+ ++.....+.+.++..-. ...+++..+.+.++.+.+.+.|.
T Consensus 253 G~ii~p~~~~~-----~~~~--~~~~~~~~~~~~~-~~-~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~ 323 (433)
T PRK06855 253 GWIEVYNADKD-----EVFK--KYINSILNAKMIE-VC-STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLK 323 (433)
T ss_pred EEEEEeCCchh-----hHHH--HHHHHHHHhhccc-cC-CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998531000 0000 1222232221111 12 22223333444443211 12345666667778888999998
Q ss_pred cC-CceEeeCCCCCeeEEEEccCCC--------------------------CCHHHH-HHHHhhcCeEeccCCcCCCCCC
Q 012104 331 GK-GYSLVTGGTENHLVLWDLRPLG--------------------------LTGNKV-EKLCDLCNITVNKNAVFGDSSA 382 (471)
Q Consensus 331 ~~-g~~i~~~~~~~~~~~v~~~~~~--------------------------~~~~~~-~~~L~~~gI~v~~~~~p~~~~~ 382 (471)
+. |+.+ ..+.++.++|++++..- .+..++ ..++++.||.+.++..++..
T Consensus 324 ~~~~~~~-~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~-- 400 (433)
T PRK06855 324 DVPGLKV-NRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTE-- 400 (433)
T ss_pred cCCCeec-cCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCC--
Confidence 76 7665 34566788999986420 123343 56788999999988776531
Q ss_pred CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 383 LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 383 ~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
..++||++... .++++++..+.|.++++.
T Consensus 401 --~~~~Rls~~~~-----~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 401 --LNGFRVTLLER-----DEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred --CCceEEEECCC-----cHHHHHHHHHHHHHHHHH
Confidence 24699998432 367777777777776653
No 100
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=3.3e-22 Score=202.97 Aligned_cols=336 Identities=14% Similarity=0.059 Sum_probs=215.5
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-H
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-S 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t 107 (471)
+..+.|..+++. .++.+.+++.+.+.+.....| +.......+++.+.+++.+.+|..... -+|..++| +
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y------~~~~G~~~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~ 100 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLY------GPVEGLPELREAYAAHYSRLYGAAISP--EQVHITSGCN 100 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCC------CCCCCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcH
Confidence 356788777643 366888888776532111122 212223455555556777777754322 13445555 5
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||+|++.+|.|+++.. .+...| .+++.++.++ .++.+|++++++.++. ++++|+
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~ 168 (386)
T PRK07550 101 QAFWAAMVTLAGAGDEVILPLPWYFNHKM---------WLDMLG--IRPVYLPCDEGPGLLPDPAAAEALITP-RTRAIA 168 (386)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHH---------HHHhcC--CEEEEEecCCCcCCCCCHHHHHHHhcc-cCcEEE
Confidence 79999999999999999999999877642 122334 4666666664 3567899999998874 677765
Q ss_pred -Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCC-CCC----Cc-cEEEeCCCCcC--CCCCeEE
Q 012104 187 -CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN-PFE----YC-HIVTTTTHKSL--RGPRAGM 253 (471)
Q Consensus 187 -~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~-p~~----~a-Div~~s~~K~l--~GprgG~ 253 (471)
++ +||+|..++ +++|.++|+++|++||+|++|. ++...+..+. .+. +. .+++.|++|++ +|.|.|+
T Consensus 169 ~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 247 (386)
T PRK07550 169 LVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGA 247 (386)
T ss_pred EeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEe
Confidence 44 678998887 5688899999999999999986 5543322221 221 11 27799999995 6889999
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~- 332 (471)
+++++ ++.+.+.........+.+.. ...+++.++... ....++..+.+.++++.+.+.|.+.
T Consensus 248 i~~~~---------------~~~~~~~~~~~~~~~~~s~~-~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 310 (386)
T PRK07550 248 VVASP---------------ARIAEIEKFMDTVAICAPRI-GQIAVAWGLPNL-ADWRAGNRAEIARRRDAFRAVFARLP 310 (386)
T ss_pred eecCH---------------HHHHHHHHHHhhcccCCCcH-HHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99976 44444443322222222222 223333344332 2233455666777888899999875
Q ss_pred CceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
++.+. +.+..++|+.+...+++..++... +++.||.+.++..++.. ..+++||++... .++++++..+.
T Consensus 311 ~~~~~--~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~---~~~~iRis~~~~-----~~~~~~~~~~~ 380 (386)
T PRK07550 311 GWELL--ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPG---QEGYLRLAFANA-----DVAGIGELVER 380 (386)
T ss_pred CceeC--CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCC---CCCEEEEEeecC-----CHHHHHHHHHH
Confidence 66553 345678898876436677887665 57899999987665421 246899998432 36777777776
Q ss_pred HHH
Q 012104 412 LHR 414 (471)
Q Consensus 412 i~~ 414 (471)
|.+
T Consensus 381 l~~ 383 (386)
T PRK07550 381 LRA 383 (386)
T ss_pred HHh
Confidence 654
No 101
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=6.4e-23 Score=206.85 Aligned_cols=323 Identities=15% Similarity=0.116 Sum_probs=215.8
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhcc--CCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNK--YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~--~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
..++|..++|. +++.+++++...+... ...+||.. ....+.+...+++.+.+|.+.+. .+|..++|+
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~-------g~~~lr~aia~~~~~~~~~~~~~--~~I~it~G~ 97 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDR-------DAVALRADLAAYLTAQTGVGLTV--ENVWAANGS 97 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCC-------chHHHHHHHHHHhhhhccCCCCh--hhEEECCCH
Confidence 35788888865 4778999987765321 11234321 12344444445555555543221 256666765
Q ss_pred -HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 -PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 -~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi 186 (471)
+++..++.++++|||.|++..|.|.++.. .. .+.+.+++.++.+ +++.+|++++++++...++|+|+
T Consensus 98 ~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~---------~~--~~~g~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~ 165 (368)
T PRK03317 98 NEILQQLLQAFGGPGRTALGFVPSYSMHPI---------IA--RGTHTEWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVF 165 (368)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCChHHHHH---------HH--HhcCCeeEEcccC-CCCCCCHHHHHHHHhccCCCEEE
Confidence 69999999999999999999999987642 11 2223445555444 45789999999998766788776
Q ss_pred -Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----Ccc-EEEeCCCCcC--CCCCeEEEEee
Q 012104 187 -CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKSL--RGPRAGMIFYR 257 (471)
Q Consensus 187 -~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aD-iv~~s~~K~l--~GprgG~i~~~ 257 (471)
++ +||+|..++.+++.++|+.++++||+|++|. ++...+. ++.+. ..+ +++.|++|++ +|.|.|+++++
T Consensus 166 l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~ 243 (368)
T PRK03317 166 LTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA 243 (368)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC
Confidence 45 7899999999999999999999999999997 5544332 22221 223 7788999985 68899999987
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+.....+. +. +....++...++... ..+.+..+++.++.+.+.+.|++.|+.+.
T Consensus 244 ~---------------~~~~~l~~~~~~~--~~-s~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~ 303 (368)
T PRK03317 244 P---------------AVVDALRLVRLPY--HL-SAVTQAAARAALRHA--DELLASVAALRAERDRVVAWLRELGLRVA 303 (368)
T ss_pred H---------------HHHHHHHhcCCCC--CC-CHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHHHHHCCCEeC
Confidence 6 4555555433222 12 222233333445432 34555666777788889999988898764
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+..++++|.++. +..++.+.|.++||.+.+.. .++++||++. +.++++++.+.+++++.
T Consensus 304 -~~~~~~~~~~~~~----~~~~~~~~l~~~Gv~v~~~~--------~~~~iRi~~~-------~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 304 -PSDANFVLFGRFA----DRHAVWQGLLDRGVLIRDVG--------IPGWLRVTIG-------TPEENDAFLAALAEVLA 363 (368)
T ss_pred -CCCCcEEEEeccC----CHHHHHHHHHHCCEEEEeCC--------CCCeEEEecC-------CHHHHHHHHHHHHHHHH
Confidence 3444555554542 46778888889999997521 1468999972 26789999999988764
No 102
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=2.2e-22 Score=203.26 Aligned_cols=317 Identities=17% Similarity=0.160 Sum_probs=210.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
..|.+++++...+... .|.++ .|.+. ..+++.+++.+++++|++.+. .+.+.+|+.++..++.++.
T Consensus 32 ~~~~~~~a~~~~~~~~--~~~~~--~~~~~---~~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~~~ 101 (373)
T TIGR03812 32 PHPIAVKAYDMFIETN--LGDPG--LFPGT---KKIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNLAR 101 (373)
T ss_pred chHHHHHHHHHHhhcC--CCCcc--cCccH---HHHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHHHh
Confidence 4556677776554332 24443 23332 244455678999999997642 2446677888888776653
Q ss_pred --CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCC-cEEEE-cCCCCCc
Q 012104 119 --EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRP-KLIIC-GGSAYPR 194 (471)
Q Consensus 119 --~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~p-klIi~-~~s~~g~ 194 (471)
++||+|+++++.|.++. +.+...|. +++.++++ +++.+|++++++.+.+ ++ .++++ +.|++|.
T Consensus 102 ~~~~g~~vl~~~~~h~~~~---------~~~~~~G~--~~~~v~~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG~ 168 (373)
T TIGR03812 102 EEKRTPNIIVPESAHFSFE---------KAAEMLGL--ELRYAPLD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELGQ 168 (373)
T ss_pred ccCCCcEEEECCcchHHHH---------HHHHHcCC--eEEEEeeC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCCc
Confidence 47899999987665432 11233444 44455555 4678999999999865 44 44544 3678999
Q ss_pred cccHHHHHHHHHHhCCEEEEeccccchhhcc---cc--CCCCC--CCccEEEeCCCCcCCCC-CeEEEEeeCCCCCCCCC
Q 012104 195 DWDYARFRAVADKCGALLLCDMAHISGLVAA---QE--AANPF--EYCHIVTTTTHKSLRGP-RAGMIFYRKGPKPPKKG 266 (471)
Q Consensus 195 ~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~--~~~p~--~~aDiv~~s~~K~l~Gp-rgG~i~~~~~~~~~~~~ 266 (471)
..|+++|.++|+++|+++++|++|+.+.... |. .+..+ .++|++++|+||++.+| ++|++++.++
T Consensus 169 ~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------- 241 (373)
T TIGR03812 169 IDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------- 241 (373)
T ss_pred cCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH-------
Confidence 9999999999999999999999997443210 11 11122 26899999999985444 4454444332
Q ss_pred CCCCcccchHhhhhhcCCCC--------CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEee
Q 012104 267 QPEGAVYDFEDKINFAVFPS--------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~~--------~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~ 338 (471)
++.+.+... .|. ..|+++...++++..+++.+...++++..++..+++++|++.|++.|+..+.
T Consensus 242 -------~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~ 313 (373)
T TIGR03812 242 -------SYLKYLSVD-APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIGFEPVI 313 (373)
T ss_pred -------HHHhhhccc-CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEc
Confidence 333333210 111 1245556667777788887766788888999999999999999998886543
Q ss_pred CCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 339 GGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 339 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
. ...+++.+.+. +..++.+.|.+.||.++... .+..+|++++..+ +++|++++.+.|.+
T Consensus 314 ~-~~~~~v~~~~~----~~~~v~~~L~~~gi~v~~~~--------~~~~iRis~~~~~----t~edid~l~~~L~~ 372 (373)
T TIGR03812 314 E-PVLNIVAFEVD----DPEEVRKKLRDRGWYVSVTR--------CPKALRIVVMPHV----TREHIEEFLEDLKE 372 (373)
T ss_pred C-CCceEEEEEeC----CHHHHHHHHHHCCceeccCC--------CCCEEEEEEECCC----CHHHHHHHHHHHhh
Confidence 3 23445555443 34578888888999987531 2368999986543 48999999999865
No 103
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=1.2e-22 Score=210.44 Aligned_cols=335 Identities=18% Similarity=0.150 Sum_probs=217.1
Q ss_pred CCeeEecCCCC----CcHHHHHHHhhhhhccCCCCCCCCCC-CCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASENF----TSFAVIEALGSALTNKYSEGMPGNRY-YGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n~----~s~~v~~a~~~~l~~~~~~g~~~~r~-~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
+.|+|. +.++ .+|.+.++....+. +|..|+.++|. |+..+...++| ++++++++.+. .|..++|
T Consensus 110 ~~id~~-s~~~lgl~~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~Le----e~La~~~~~~~-----~i~~s~G 178 (481)
T PLN02822 110 DVVNFA-SANYLGLIGNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDCE----TKIAKFLGTPD-----SILYSYG 178 (481)
T ss_pred eEEEeE-CCCcCCCCCCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHHH----HHHHHHhCCCC-----EEEECCH
Confidence 345664 3344 37899999987764 45567777764 55445555555 67889999764 3555677
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh-------
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD------- 179 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~------- 179 (471)
..++.+++.+++++||.|+.....|+.+.. .+.+++. +++.++.+ |.++++..+++
T Consensus 179 ~~a~~sai~a~~~~gd~Ii~d~~~H~s~~~---------~~~ls~~--~~~~~~~n------d~~~l~~~l~~~~~~~~~ 241 (481)
T PLN02822 179 LSTIFSVIPAFCKKGDIIVADEGVHWGIQN---------GLYLSRS--TIVYFKHN------DMESLRNTLEKLTAENKR 241 (481)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCccHHHHH---------HHHHcCC--eEEEECCC------CHHHHHHHHHHHhhhhcc
Confidence 778999999999999999977655433210 1223333 34444322 45555554432
Q ss_pred -CCC-cEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-c----cCCC-CCCCccEEEeCCCCcCCCC
Q 012104 180 -FRP-KLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-Q----EAAN-PFEYCHIVTTTTHKSLRGP 249 (471)
Q Consensus 180 -~~p-klIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g----~~~~-p~~~aDiv~~s~~K~l~Gp 249 (471)
.++ ++|++. ++++|.+.|+++|+++|++||+++++|++|..|.... | .+.. +....|++++|++|++ |.
T Consensus 242 ~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~ 320 (481)
T PLN02822 242 KKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-AT 320 (481)
T ss_pred cCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hh
Confidence 124 577764 6779999999999999999999999999998775431 2 1111 1125689999999998 56
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCC--CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG--PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~--p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~ 327 (471)
.||++++++ ++.+.+......+.+++ |...+.+++ .+++... ...+..+++.++.++|.+
T Consensus 321 ~GG~i~g~~---------------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l~--~~~~~~~~l~~~~~~l~~ 382 (481)
T PLN02822 321 EGGFCTGSA---------------RVVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVLE--DNPSVLAKLKENIALLHK 382 (481)
T ss_pred CCeEEEcCH---------------HHHHHHHhcCCceeeccccCHHHHHHHH-HHHHHHH--hCHHHHHHHHHHHHHHHH
Confidence 679999877 44444433222223333 233333333 3665432 235677889999999999
Q ss_pred HHHcC-CceEeeCCCCCeeEEEEccCC-CC---C---HHHHHHH-HhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 328 YLTGK-GYSLVTGGTENHLVLWDLRPL-GL---T---GNKVEKL-CDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 328 ~L~~~-g~~i~~~~~~~~~~~v~~~~~-~~---~---~~~~~~~-L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
.|++. |+.+. .+..+.++++.+... +. + ..++.+. |+++||.+.+...|.-.....+.++|+++++.
T Consensus 383 ~L~~~~g~~~~-~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~--- 458 (481)
T PLN02822 383 GLSDIPGLSIG-SNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAG--- 458 (481)
T ss_pred HHHhcCCcccC-CCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCC---
Confidence 99886 88774 335677777877532 11 1 2345544 45889999875433321111245799987543
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+++|++++.+.|.+++..
T Consensus 459 -~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 459 -HTESDILKASESLKRVAAS 477 (481)
T ss_pred -CCHHHHHHHHHHHHHHHHH
Confidence 4589999999999987764
No 104
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=8.5e-23 Score=206.58 Aligned_cols=318 Identities=17% Similarity=0.129 Sum_probs=214.0
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.|+|..++|. .+|.+++++..... ...||.. . ...+ ++.+++++|++.+ +|.+++|+
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~~---~~~Yp~~------~-~~~l----r~~ia~~~~~~~~----~I~~t~Ga~ 113 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMKF---PYVYPDP------E-SRRL----RAALAEDSGLESE----NILVGCGAD 113 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhHh---hccCCCC------C-HHHH----HHHHHHHhCcChh----hEEEcCCHH
Confidence 467889888865 47889988854211 1112221 1 2233 4667888898764 45556665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII- 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi- 186 (471)
+++..++.++++|||+|++++|.|+.+.. .....| .+++.++.+ +++.+|++++++.+...++++|+
T Consensus 114 ~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~---------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~~~~~~~~~v~l 181 (380)
T PLN03026 114 ELIDLLMRCVLDPGDKIIDCPPTFGMYVF---------DAAVNG--AEVIKVPRT-PDFSLDVPRIVEAVETHKPKLLFL 181 (380)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH---------HHHHcC--CEEEEeecC-CCCCcCHHHHHHHHhccCCcEEEE
Confidence 68889999999999999999999865421 112334 344555554 45789999999988556789887
Q ss_pred Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-C-ccEEEeCCCCc--CCCCCeEEEEeeCCCC
Q 012104 187 CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-Y-CHIVTTTTHKS--LRGPRAGMIFYRKGPK 261 (471)
Q Consensus 187 ~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~-aDiv~~s~~K~--l~GprgG~i~~~~~~~ 261 (471)
++ +||+|..++.+++.++++.. ++|++|++|. .+...+.....++ + -.|++.|++|+ ++|.|.||++++.
T Consensus 182 ~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~-~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--- 256 (380)
T PLN03026 182 TSPNNPDGSIISDDDLLKILELP-ILVVLDEAYI-EFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--- 256 (380)
T ss_pred eCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcch-hhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH---
Confidence 44 78999999999999999865 8999999996 5543321111122 1 23889999999 5899999999876
Q ss_pred CCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC-ceEeeCC
Q 012104 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG-YSLVTGG 340 (471)
Q Consensus 262 ~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~~i~~~~ 340 (471)
++.+.+.+...+.. .+...+ .+...+|.. .+.+++..+.+.++.+.+.+.|++.| +.+ .+
T Consensus 257 ------------~~i~~l~~~~~~~~--~~~~~q-~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~--~p 317 (380)
T PLN03026 257 ------------SIIEYLWRAKQPYN--VSVAAE-VAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLEP--YP 317 (380)
T ss_pred ------------HHHHHHHHhcCCCC--CCHHHH-HHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCeE--CC
Confidence 45555554433322 112222 233334532 23446677777888888999998875 343 23
Q ss_pred CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 341 TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 341 ~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.+++++|+++.. +++..++.+.|.++||.|.++..+ ...+++||++. ..++++++.+.|+++
T Consensus 318 ~~~~f~~~~~~~-~~~~~~~~~~l~~~gI~v~~~~~~-----~~~~~lRis~~-------~~~~~~~l~~al~~~ 379 (380)
T PLN03026 318 SDANFILCRVTS-GRDAKKLKEDLAKMGVMVRHYNSK-----ELKGYIRVSVG-------KPEHTDALMEALKQL 379 (380)
T ss_pred CCCeEEEEECCC-CCCHHHHHHHHHHCCeEEEECCCC-----CCCCEEEEecC-------CHHHHHHHHHHHHHh
Confidence 456678888753 456788888888999999764321 13578999973 367999999998753
No 105
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.92 E-value=7.3e-23 Score=188.97 Aligned_cols=346 Identities=18% Similarity=0.140 Sum_probs=238.2
Q ss_pred eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 35 ~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
.|+|++.-+|++|++|+... ..|+.+. +++.... ...+-++..|....+. ..+.++||+.+..+++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~-----~lgh~sP------e~~qIm~-~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP-----SLGHMSP------EFVQIMD-EVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC-----ccccCCH------HHHHHHH-HHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 78999999999999999632 3455443 3443333 3456678889876653 4677889999999999
Q ss_pred HHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE--cCCCC
Q 012104 115 TAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC--GGSAY 192 (471)
Q Consensus 115 ~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~--~~s~~ 192 (471)
..++.|||+|++....-.|+ .+.. -....|..+.++.. + ..+...++.+++.+.+++|++|++ +.|++
T Consensus 86 ~N~lePgd~vLv~~~G~wg~---ra~D----~~~r~ga~V~~v~~--~-~G~~~~le~i~~~lsqh~p~~vfv~hgdsST 155 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVSTGTWGQ---RAAD----CARRYGAEVDVVEA--D-IGQAVPLEEITEKLSQHKPKAVFVTHGDSST 155 (385)
T ss_pred HhhcCCCCeEEEEEechHHH---HHHH----HHHhhCceeeEEec--C-cccCccHHHHHHHHHhcCCceEEEEecCccc
Confidence 99999999999987433333 2211 11234554554433 3 457899999999999999998874 37889
Q ss_pred Ccccc-HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe-EEEEeeCCC-CCC-CCC
Q 012104 193 PRDWD-YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA-GMIFYRKGP-KPP-KKG 266 (471)
Q Consensus 193 g~~~d-~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg-G~i~~~~~~-~~~-~~~ 266 (471)
|...| .+.+.++|++|+++++||...+.|- .+--++ +.|+..+.++|.|.+|.| +.|..++.. +.. +.|
T Consensus 156 gV~q~~~~~~g~lc~k~~~lllVD~VaSlgg-----t~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK 230 (385)
T KOG2862|consen 156 GVLQDLLAISGELCHKHEALLLVDTVASLGG-----TEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRK 230 (385)
T ss_pred cccchHHHHHHHHhhcCCeEEEEechhhcCC-----ccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhcc
Confidence 99999 5566799999999999999877552 222334 789999999999999998 555444321 111 122
Q ss_pred CCCCc-ccchHhhhhhcCCC----CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC
Q 012104 267 QPEGA-VYDFEDKINFAVFP----SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT 341 (471)
Q Consensus 267 ~~~i~-~~~l~~~i~~~~~~----~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~ 341 (471)
.+... +++.....+..... .+.-+|....+.++.+||..+.++++++.+++.+++++++...|++.|++.+....
T Consensus 231 ~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e 310 (385)
T KOG2862|consen 231 TKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDE 310 (385)
T ss_pred CCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecCh
Confidence 22222 23433332221111 12346788889999999999999999999999999999999999999998765322
Q ss_pred CCe---eEEEEccCCCCCHHHHHHHHh-hcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 342 ENH---LVLWDLRPLGLTGNKVEKLCD-LCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 342 ~~~---~~~v~~~~~~~~~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.-. .-.+. -+.++|+.++...+. ..++.+..+. ++..+..+|||+..++. +.+-|+.+.++|..++.
T Consensus 311 ~~rlptvttv~-vp~gvDw~dVv~~~~~~~~vei~ggl-----g~~~gKv~RIGl~gcna---~~e~i~~v~~ll~~alq 381 (385)
T KOG2862|consen 311 ELRLPTVTTVK-VPYGVDWKDVVAYAMSHYVVEIGGGL-----GPTVGKVFRIGLLGCNA---NVEYIDNVVELLKLALQ 381 (385)
T ss_pred hhccCcceeee-cCCCCCHHHHHHHHHHhcCEEecccc-----CCCcccEEEEEEeeccC---CcHHHHHHHHHHHHHHh
Confidence 111 11222 256899999865555 4577776543 34456899999855432 35678888888777665
Q ss_pred H
Q 012104 418 L 418 (471)
Q Consensus 418 ~ 418 (471)
.
T Consensus 382 ~ 382 (385)
T KOG2862|consen 382 R 382 (385)
T ss_pred h
Confidence 4
No 106
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.2e-22 Score=205.22 Aligned_cols=336 Identities=16% Similarity=0.050 Sum_probs=216.2
Q ss_pred cCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-H
Q 012104 31 CRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-S 107 (471)
Q Consensus 31 ~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t 107 (471)
.+.++|..+.+.. ++.+.+++...+.... .+|+. ......+.+.+.+++++.+|.+... .+|..++| +
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~------~~G~~~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~ 103 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-TKYTL------VNGTPALRKAIIAKLERRNGLHYAD--NEITVGGGAK 103 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC------CCCCHHHHHHHHHHHHHhcCCCCCh--hhEEEeCCHH
Confidence 4568887666543 5788888887764321 12322 2222344444456777777875422 24555665 5
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||+|++++|.|+++.. .+...+ ...+.++++. +++.+|++++++.+. .++++|+
T Consensus 104 ~al~~~~~~~~~~gd~vl~~~p~y~~y~~---------~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~ 171 (402)
T PRK06107 104 QAIFLALMATLEAGDEVIIPAPYWVSYPD---------MVLAND--GTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLI 171 (402)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCcCHHH---------HHHHcC--CEEEEecCCcccCCCCCHHHHHhhcC-cCceEEE
Confidence 79999999999999999999998876642 112222 2344444442 346799999999886 3677665
Q ss_pred -Ec-CCCCCccccH---HHHHHHHHHh-CCEEEEeccccchhhcccc-CCCCC---CC---ccEEEeCCCCcC--CCCCe
Q 012104 187 -CG-GSAYPRDWDY---ARFRAVADKC-GALLLCDMAHISGLVAAQE-AANPF---EY---CHIVTTTTHKSL--RGPRA 251 (471)
Q Consensus 187 -~~-~s~~g~~~d~---~~i~~ia~~~-g~~livD~a~~~glv~~g~-~~~p~---~~---aDiv~~s~~K~l--~Gprg 251 (471)
++ +||+|..++. ++++++|+++ |+++|+|++|. .+.+.+. .++.. +. --++++|+||++ +|.|.
T Consensus 172 l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (402)
T PRK06107 172 LNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRI 250 (402)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccce
Confidence 44 7899999876 4556778898 99999999997 5555442 22211 11 127899999994 78899
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
||+++++ ++.+.+........ .+++....++++.++.. .....++..+++.++++.+.+.|++
T Consensus 251 G~~~~~~---------------~~~~~~~~~~~~~~-~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~ 313 (402)
T PRK06107 251 GYAAGPA---------------DLIAAINKLQSQSS-SCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNA 313 (402)
T ss_pred eeeecCH---------------HHHHHHHHHHHhcc-cCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999887 45554444321111 12333333444444532 1234567777788888899999988
Q ss_pred C-CceEeeCCCCCeeEEEEccC-------CCC---CHHHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 332 K-GYSLVTGGTENHLVLWDLRP-------LGL---TGNKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 332 ~-g~~i~~~~~~~~~~~v~~~~-------~~~---~~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
. |+.+. .+.++.++|+++.. .+. +..++ ..+++++||.+.++..++. .+++||++..
T Consensus 314 ~~g~~~~-~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~-----~~~iRis~~~----- 382 (402)
T PRK06107 314 IPGLSCL-VPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGL-----SPYFRLSIAT----- 382 (402)
T ss_pred CCCCccc-CCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCC-----CCeEEEEeCC-----
Confidence 6 77764 45667788988731 221 44554 5777899999998876542 4699999842
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l~ 417 (471)
.++++++..+.|.+.+.
T Consensus 383 -~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 383 -SLETLEEACARIERAVA 399 (402)
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 36777777777766553
No 107
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.92 E-value=2.8e-22 Score=204.52 Aligned_cols=336 Identities=15% Similarity=0.085 Sum_probs=207.4
Q ss_pred cCCeeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-----CCCCCCce
Q 012104 31 CRGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-----LDPTQWGV 99 (471)
Q Consensus 31 ~~~i~li~s~n------~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-----~~~~~~~~ 99 (471)
++.++|..++. ..++.+++++...+......+|... ....++. +.++++++ ++.+
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~------~g~~~lr----~aia~~~~~~~~~~~~~---- 96 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPT------VGALSAR----EAIASYYHNPDGPIEAD---- 96 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCC------CCCHHHH----HHHHHHHhhcCCCCCHH----
Confidence 45688876653 3578888988776654322233211 1112333 23344443 3332
Q ss_pred eee-cCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHh
Q 012104 100 NVQ-PYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKA 177 (471)
Q Consensus 100 ~v~-~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~ 177 (471)
+|. +.++++|+..++.++++|||+|++.+|+|..+.. .+...| .++++++++.+ ++.+|++.+++.+
T Consensus 97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~---------~~~~~g--~~v~~~~~~~~~~~~~d~~~l~~~~ 165 (401)
T TIGR01264 97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYET---------LAESMG--IEVKLYNLLPDKSWEIDLKQLESLI 165 (401)
T ss_pred HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHH---------HHHHcC--CEEEEeecCCccCCCCCHHHHHHHh
Confidence 343 4455689999999999999999999998876532 122334 35555555433 5789999999987
Q ss_pred hhCCCcEEEE-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC---C-c-cEEEeCCCCc--
Q 012104 178 LDFRPKLIIC-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---Y-C-HIVTTTTHKS-- 245 (471)
Q Consensus 178 ~~~~pklIi~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~---~-a-Div~~s~~K~-- 245 (471)
.. ++++|++ + +||+|..++ +++|.++|+++|++|++|++|. ++.+.+....++. . . -|++.|++|+
T Consensus 166 ~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~ 243 (401)
T TIGR01264 166 DE-KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYG-DMVFSGATFEPLASLSSTVPILSCGGLAKRWL 243 (401)
T ss_pred cc-CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhh-hhccCCcccccHHHcCCCCcEEEEccCcccCC
Confidence 64 5787764 4 789999886 5677788999999999999997 7766543222221 1 1 2789999997
Q ss_pred CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 012104 246 LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (471)
Q Consensus 246 l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l 325 (471)
++|.|.||++++++... +. ++.+.+.....+. . +++.....+++.++.......+++..+++.++.+.+
T Consensus 244 ~~GlRiG~iv~~~~~~~-------~~--~~~~~~~~~~~~~-~-~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l 312 (401)
T TIGR01264 244 VPGWRLGWIIIHDRRGI-------LR--DIRDGLVKLSQRI-L-GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLC 312 (401)
T ss_pred CccceEEEEEecCcchh-------HH--HHHHHHHHHhhcc-C-CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 78999999998752000 00 1222333221111 1 122223333344454322335577778888888899
Q ss_pred HHHHHcC-CceEeeCCCCCeeEEEEccC----CCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 326 GNYLTGK-GYSLVTGGTENHLVLWDLRP----LGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 326 ~~~L~~~-g~~i~~~~~~~~~~~v~~~~----~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
.+.|++. |+.+. .+.++.++|++++. ...+..++. ++++++||.+.++..++ .++++||++.. .
T Consensus 313 ~~~L~~~~~~~~~-~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~-----~~~~iRis~~~--~-- 382 (401)
T TIGR01264 313 YGALAAVPGLRPV-MPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFE-----YPGFFRVVLTV--P-- 382 (401)
T ss_pred HHHHHhCCCCccc-CCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcC-----CCCeEEEEEcC--C--
Confidence 9999887 66653 34567788998753 123455664 44578999998876553 24799999842 2
Q ss_pred CCHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l 416 (471)
++.+++..+.|.+.+
T Consensus 383 --~~~l~~~l~rl~~~~ 397 (401)
T TIGR01264 383 --VVMMEEACSRIQEFC 397 (401)
T ss_pred --HHHHHHHHHHHHHHH
Confidence 455555555444443
No 108
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=1.2e-22 Score=207.63 Aligned_cols=330 Identities=20% Similarity=0.182 Sum_probs=213.4
Q ss_pred eEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHH
Q 012104 35 ELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (471)
Q Consensus 35 ~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A 109 (471)
...+|.||+ +|.|++++...+. +|..|..+.|.+.| .+...++| +.+++++|.+. .+.++||+.|
T Consensus 49 ~~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~a 118 (407)
T PRK09064 49 TVWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVS 118 (407)
T ss_pred EEEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHH
Confidence 345688875 7899999987764 44444445554333 34455555 56788888643 4667899999
Q ss_pred HHHHHHHhcC--CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---CCCcE
Q 012104 110 NFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKL 184 (471)
Q Consensus 110 ~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~~pkl 184 (471)
|..++..+.. |++.|+...+.|.+.+. + +...+. ....++ ..|+++++++++. .++++
T Consensus 119 n~~ai~~l~~~~~~~~i~~~~~~h~s~~~-~--------~~~~~~--~~~~~~------~~d~~~le~~l~~~~~~~~~~ 181 (407)
T PRK09064 119 NDATLSTLAKLIPDCVIFSDELNHASMIE-G--------IRRSRC--EKHIFR------HNDVAHLEELLAAADPDRPKL 181 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEeCcchHHHHH-H--------HHHcCC--cEEEEC------CCCHHHHHHHHHhccCCCCeE
Confidence 9999988764 88877776554432211 1 112222 222221 3588899888863 35777
Q ss_pred EEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc-CC--CCC-CCccEEEeCCCCcCCCCCeEEEEee
Q 012104 185 IICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE-AA--NPF-EYCHIVTTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 185 Ii~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~-~~--~p~-~~aDiv~~s~~K~l~GprgG~i~~~ 257 (471)
|++. .|+.|...|+++|+++|+++|++|++|++|+.|+... |. .. .++ ...|++++|++|++ |+.||+++++
T Consensus 182 v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~ 260 (407)
T PRK09064 182 IAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGS 260 (407)
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecC
Confidence 7754 6788999999999999999999999999998775321 11 11 112 24589999999997 5568999887
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
+ ++.+.+.....+.. .++.+...+++...+++.+.. .....+++.++++++.+.|++.|+++
T Consensus 261 ~---------------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~ 323 (407)
T PRK09064 261 A---------------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAAGIPV 323 (407)
T ss_pred H---------------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 6 44444433222211 222333333444456665432 23445778889999999999989887
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+. ..++++.+.+.. ..+..++.+.| ++.||.+.+...|.. +...+.+||+.+..+ +++|++++.+.|.++
T Consensus 324 ~~--~~~~iv~i~~~~-~~~~~~l~~~L~~~~gi~v~~~~~p~~--~~~~~~lRis~~~~~----t~edi~~l~~~l~~~ 394 (407)
T PRK09064 324 MP--NESHIVPVMVGD-PEKCKKASDMLLEEHGIYVQPINYPTV--PRGTERLRITPTPFH----TDEMIDHLVEALVEV 394 (407)
T ss_pred CC--CCCCEEEEEeCC-HHHHHHHHHHHHHhCCEEEeeECCCCC--CCCCceEEEEeCCCC----CHHHHHHHHHHHHHH
Confidence 53 234555555432 12345676665 567999987544432 223468999986554 489999999999988
Q ss_pred HHH
Q 012104 416 VTL 418 (471)
Q Consensus 416 l~~ 418 (471)
++.
T Consensus 395 ~~~ 397 (407)
T PRK09064 395 WAR 397 (407)
T ss_pred HHH
Confidence 754
No 109
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.92 E-value=1.4e-22 Score=205.55 Aligned_cols=335 Identities=16% Similarity=0.116 Sum_probs=214.8
Q ss_pred cCCeeEecCC--CC-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 31 CRGIELIASE--NF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~--n~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
++.|+|..++ .+ .+|.+++++...+. ++...+.+.++..|.. .+.+..++++++++|.+. .+.++||+
T Consensus 33 ~~~id~~~~~~~g~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~~---~l~~~l~~~l~~~~g~~~-----~i~~~sG~ 103 (385)
T TIGR01825 33 KEVINLSSNNYLGFADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGTL---RLHEELEEKLAKFKKTEA-----ALVFQSGF 103 (385)
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHH-HcCCCCCccCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHH
Confidence 3567887653 44 57888888876653 3322222222333331 222234467888888753 46678999
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC---CCcE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---RPKL 184 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~---~pkl 184 (471)
+|+..++.++++|||.|++.++.|+++.. .+...+. +...+ ..+|++++++.+.+. ++++
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~---------~~~~~g~--~~~~~------~~~d~~~l~~~l~~~~~~~~~~ 166 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIID---------GLRLTKA--TKKIY------KHADMDDLDRVLRENPSYGKKL 166 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHH---------HHHhcCC--ceEEe------CCCCHHHHHHHHHhhccCCCeE
Confidence 99999999999999999999988776531 1122232 22222 258899999877643 5678
Q ss_pred EEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc---CCCCC-CCccEEEeCCCCcCCCCCeEEEEee
Q 012104 185 IICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE---AANPF-EYCHIVTTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 185 Ii~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~---~~~p~-~~aDiv~~s~~K~l~GprgG~i~~~ 257 (471)
|+++ .+++|...|+++|.++|+++|+++++|++|..|.... +. ...++ ...|+++.|+||++ |++||+++.+
T Consensus 167 v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~ 245 (385)
T TIGR01825 167 IVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGH 245 (385)
T ss_pred EEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecC
Confidence 8766 5788999999999999999999999999997553321 11 00122 25689999999998 5578998877
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQG-GPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g-~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
+ ++.+.+.....+...+ .++...+++...+++.... ..+..++..++.+++.+.|.+.|+++
T Consensus 246 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~g~~~ 308 (385)
T TIGR01825 246 K---------------ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKLGYDT 308 (385)
T ss_pred H---------------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 6 4555454322222222 2334445555556654422 23456677788899999999888887
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
..+ . ..++.+.+.. ..+..++.+.|.+.||.+.....|.. +.....+|+..+.. .++++++++++.|.+++
T Consensus 309 ~~~-~-~~~~~~~~~~-~~~~~~~~~~L~~~gi~v~~~~~~~~--~~~~~~iRi~~~~~----~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 309 GGS-E-TPITPVVIGD-EKAAQEFSRRLFDEGIFAQSIVFPTV--PRGTARIRNIPTAE----HTKDDLDQALDAYEKVG 379 (385)
T ss_pred CCC-C-CCEEEEEECC-HHHHHHHHHHHHHCCcEEcccCCCCC--CCCCceEEEEEcCC----CCHHHHHHHHHHHHHHH
Confidence 532 2 2344443322 12355677777677999864333321 22346899986544 34899999999998877
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
+.
T Consensus 380 ~~ 381 (385)
T TIGR01825 380 KE 381 (385)
T ss_pred HH
Confidence 53
No 110
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=6.8e-23 Score=206.65 Aligned_cols=320 Identities=18% Similarity=0.152 Sum_probs=215.0
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..++|. .+|.+++++...+.. + ..|+.. . ...+ ++.+++++|++.+ +|..++|+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~------~-~~~l----r~~ia~~~~~~~~----~i~~t~G~~ 94 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG------S-GFEL----KAALAEKFGVDPE----RIILGNGSD 94 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------c-HHHH----HHHHHHHhCcCHH----HEEEcCCHH
Confidence 456888777765 477888888776532 2 233321 1 1233 3567778888753 45556665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
+++..++.+++++||+|++.+|.|.++.. .....|. +++.++. +++.+|++++++.+. .++++|++
T Consensus 95 ~~l~~~~~~l~~~gd~vl~~~p~y~~~~~---------~~~~~g~--~~~~~~~--~~~~~~~~~l~~~~~-~~~~~v~l 160 (367)
T PRK02731 95 EILELLARAYLGPGDEVIYSEHGFAVYPI---------AAQAVGA--KPVEVPA--KDYGHDLDAMLAAVT-PRTRLVFI 160 (367)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCHHHHHH---------HHHHcCC--eEEEecc--cCCCCCHHHHHHHhC-CCCcEEEE
Confidence 57778888999999999999998765421 1122343 4444444 357899999999886 47898874
Q ss_pred c--CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCC----C-ccEEEeCCCCc--CCCCCeEEEEe
Q 012104 188 G--GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE----Y-CHIVTTTTHKS--LRGPRAGMIFY 256 (471)
Q Consensus 188 ~--~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~----~-aDiv~~s~~K~--l~GprgG~i~~ 256 (471)
+ +||+|..++.+++.++|+.+ |+++++|++|. .+...+....++. . -.++++|++|+ ++|.|.||+++
T Consensus 161 ~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 161 ANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred eCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 4 78999999999999999875 99999999986 4443322222221 1 23788999998 47889999998
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
++ ++.+.+.....+. +.+...+ .+...+++. ...+++..+...++.+.+.+.|++.|+.+
T Consensus 240 ~~---------------~~~~~l~~~~~~~--~~~~~~~-~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~ 299 (367)
T PRK02731 240 PP---------------EIIDALNRVRQPF--NVNSLAL-AAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAELGLEY 299 (367)
T ss_pred CH---------------HHHHHHHHccCCC--CCCHHHH-HHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 86 4555555432222 1112222 222223321 22346667777778888999998888876
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
. + ..+.++|+++. .+.+..++.+.|.++||.+.++..++ .++++||++. +.++++++.+.|.+++
T Consensus 300 ~-~-~~g~~~~i~~~-~~~~~~~~~~~L~~~gI~v~~~~~~~-----~~~~iRis~~-------~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 300 I-P-SVGNFILVDFD-DGKDAAEAYQALLKRGVIVRPVAGYG-----LPNALRITIG-------TEEENRRFLAALKEFL 364 (367)
T ss_pred C-C-CCceEEEEECC-CCCCHHHHHHHHHHCCEEEEeCCCCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHH
Confidence 4 2 34567888873 34678888888989999998764332 2468999973 3689999999998876
Q ss_pred H
Q 012104 417 T 417 (471)
Q Consensus 417 ~ 417 (471)
+
T Consensus 365 ~ 365 (367)
T PRK02731 365 A 365 (367)
T ss_pred h
Confidence 4
No 111
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.92 E-value=2.2e-22 Score=205.13 Aligned_cols=309 Identities=15% Similarity=0.129 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCC--CCEEEEeCCCCCCcccccccccCCccceecc--c
Q 012104 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEP--HDRIMGLDLPSGGHLTHGYYTSGGKKISATS--I 152 (471)
Q Consensus 77 ~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~p--GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g--~ 152 (471)
++.+.+++++++++|++.++ +.+.+++|+.++.+++.+++.+ ||+|++.++.|+++.. .+...+ .
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~---------~~~~~~~~~ 132 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--ASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPA---------VARTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--eeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHH---------HHHHhcccC
Confidence 34444568899999987532 4444334445666667777776 9999999998887642 112222 1
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-CCCCCccccH-HHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-GSAYPRDWDY-ARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~s~~g~~~d~-~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
+.+++.++++ +++.+|++++++.+.+ ++++|+++ .+++|...|+ ++|+++|+++|+++++|++|..|... ..+.
T Consensus 133 g~~~~~v~~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~--~~~~ 208 (398)
T cd00613 133 GIEVVEVPSD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGL--KPPG 208 (398)
T ss_pred CcEEEEeccC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCC--CChH
Confidence 1344455554 3468999999998863 68877654 5678988886 99999999999999999998654311 0011
Q ss_pred CCCCccEEEeCCCCcC-C----CCCeEEEEeeCCCCCCC-CC---CCC----Ccccc--hHhhhhhc----CCCCCCCCC
Q 012104 231 PFEYCHIVTTTTHKSL-R----GPRAGMIFYRKGPKPPK-KG---QPE----GAVYD--FEDKINFA----VFPSLQGGP 291 (471)
Q Consensus 231 p~~~aDiv~~s~~K~l-~----GprgG~i~~~~~~~~~~-~~---~~~----i~~~~--l~~~i~~~----~~~~~~g~p 291 (471)
..++|++++|+||++ + ||++|+++.++++.... .. ... ...+. +..+.... ..+...++
T Consensus 209 -~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~- 286 (398)
T cd00613 209 -EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTG- 286 (398)
T ss_pred -HcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceec-
Confidence 116899999999996 2 57889998876532110 00 000 00000 00000000 00111111
Q ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC-CCCHHHHHHHHhhcCeE
Q 012104 292 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL-GLTGNKVEKLCDLCNIT 370 (471)
Q Consensus 292 ~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~ 370 (471)
.....++.+.++......++++..++..++++++.+.|++.+......+...+.+++++... +.+..++.+.|.+.||.
T Consensus 287 ~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~ 366 (398)
T cd00613 287 QALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFH 366 (398)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCcc
Confidence 12222223334555555677888899999999999999987654322222223456665432 34567788888889998
Q ss_pred eccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 371 VNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 371 v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.... | ...+.+|++.+..++ ++|++++.+.|
T Consensus 367 ~~~~~-~-----~~~~~lRis~~~~~t----~edid~~~~~L 398 (398)
T cd00613 367 APTMY-L-----PVDGTLMIEPTETET----KEELDALLEAL 398 (398)
T ss_pred ccccc-c-----CCCCeEEEEcCCCCC----HHHHHHHHHhC
Confidence 75421 1 134789999877655 89999998764
No 112
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.92 E-value=1.9e-22 Score=201.97 Aligned_cols=313 Identities=15% Similarity=0.160 Sum_probs=214.1
Q ss_pred CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccc
Q 012104 68 YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKI 147 (471)
Q Consensus 68 ~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~ 147 (471)
-|+|......+| +.++++||.++ .|.++||+.|+.+++...++|||.| +...+. .... ..+
T Consensus 73 ~Yagd~s~~~LE----~~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f---~Tt~-----ahI 133 (460)
T PRK13237 73 AYAGSRNFYHLE----ETVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGNMYF---TTTR-----YHQ 133 (460)
T ss_pred hhcCCCcHHHHH----HHHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCccch---HhhH-----HHH
Confidence 455666677888 56788999987 4678899999998766668999976 332222 1100 012
Q ss_pred eeccceeEEEeee---------ecCCCCCCCHHHHHHHhhhCCC---cEEE--EcCCCC-Cccc---cHHHHHHHHHHhC
Q 012104 148 SATSIYFESLPYK---------VNSSTGYIDYDKLEEKALDFRP---KLII--CGGSAY-PRDW---DYARFRAVADKCG 209 (471)
Q Consensus 148 ~~~g~~~~~~~~~---------v~~~~~~iD~~~le~~~~~~~p---klIi--~~~s~~-g~~~---d~~~i~~ia~~~g 209 (471)
...|. .++... .++.++.+|+++|++.+.+..+ .+|. ...|.+ |.++ ++++++++|+++|
T Consensus 134 ~~~Ga--~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~G 211 (460)
T PRK13237 134 ELNGG--IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHG 211 (460)
T ss_pred HhCCc--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcC
Confidence 22332 222221 1356799999999999975322 2222 223444 5555 6789999999999
Q ss_pred CEEEEeccccch---hhc---cccCCCC--------CCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccch
Q 012104 210 ALLLCDMAHISG---LVA---AQEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDF 275 (471)
Q Consensus 210 ~~livD~a~~~g---lv~---~g~~~~p--------~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l 275 (471)
+.|+.|+||.+| ++- .+....+ +.++|.+++|+||.+.++.||+|+++++ ++
T Consensus 212 l~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~--------------eL 277 (460)
T PRK13237 212 IKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE--------------EL 277 (460)
T ss_pred CEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH--------------HH
Confidence 999999999988 441 1221222 2479999999999998999999999986 78
Q ss_pred Hhhhhhc--CCCCC--CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEcc
Q 012104 276 EDKINFA--VFPSL--QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLR 351 (471)
Q Consensus 276 ~~~i~~~--~~~~~--~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~ 351 (471)
.++++.. .++|+ .|+..-..+.|+|+++.+...+ .|.++...++++|.+.|.+.|+.++. +++.|-+++|..
T Consensus 278 ~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~---~y~~~ri~~~~~l~~~L~~~Gvpv~~-p~ggH~v~vda~ 353 (460)
T PRK13237 278 FDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQY---EYIEHRVGQVRYLGEKLLAAGVPIVE-PVGGHAVFLDAR 353 (460)
T ss_pred HHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchH---HHHHHHHHHHHHHHHHHHHCCCceec-CCCceEEEEEhH
Confidence 8877765 45554 3444446788999999987653 78899999999999999999999975 577899999864
Q ss_pred CC-------CCCHHHH-HHHHhhcCeEec-cCCc-----CCCCCCCC--CCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 352 PL-------GLTGNKV-EKLCDLCNITVN-KNAV-----FGDSSALA--PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 352 ~~-------~~~~~~~-~~~L~~~gI~v~-~~~~-----p~~~~~~~--~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.. ...++.+ ..+-.+.||... .+++ |....... -.-+|+..| +|-.+.+.|+.+++.+..+
T Consensus 354 ~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaip---rr~yt~~h~~~v~~~~~~~ 430 (460)
T PRK13237 354 RFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIP---RRVYTYAHMDVVADSVIKL 430 (460)
T ss_pred HhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccc---cccccHHHHHHHHHHHHHH
Confidence 21 2234444 444567787642 2222 21111111 247998764 5667789999999999998
Q ss_pred HHHHHHH
Q 012104 416 VTLTLEI 422 (471)
Q Consensus 416 l~~~~~~ 422 (471)
.++...+
T Consensus 431 ~~~~~~~ 437 (460)
T PRK13237 431 YKHREDI 437 (460)
T ss_pred HHhHhhc
Confidence 8876544
No 113
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=4.2e-22 Score=202.72 Aligned_cols=334 Identities=17% Similarity=0.114 Sum_probs=208.4
Q ss_pred ccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCC--CCCceeeecCC
Q 012104 30 QCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP--TQWGVNVQPYS 105 (471)
Q Consensus 30 ~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~--~~~~~~v~~~s 105 (471)
.+..++|..+++. +++.+.+++.+.+... ..|+.. .....+.+...+++.+.+|.+. +. .-+|..++
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~--~~Y~~~------~G~~~lr~aia~~~~~~~~~~~~~~~-~~~i~it~ 97 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLHGL--STYPTT------KGLPELRQAIARWLERRFDLPTGVDP-ERHVLPVN 97 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhcc--CCCCCC------CCCHHHHHHHHHHHHHhhCCcccCCC-CceEEECC
Confidence 3578888877754 4678888887755321 223321 1122343333455656555431 11 01455555
Q ss_pred h-HHHHHHHHHHhcCCCCE--EEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCC
Q 012104 106 G-SPANFAAYTAVLEPHDR--IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFR 181 (471)
Q Consensus 106 G-t~A~~~~~~all~pGD~--Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~ 181 (471)
| ++|+..++.++++|||+ |++++|.|.++.. .+...| .+++.++++++ ++.+|++++++.+.+ +
T Consensus 98 Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~~~~-~ 165 (393)
T TIGR03538 98 GTREALFAFAQAVINPGQAPLVVMPNPFYQIYEG---------AALLAG--AEPYFLNCTAENGFLPDFDAVPESVWR-R 165 (393)
T ss_pred CcHHHHHHHHHHHcCCCCcceEEecCCCCcchHH---------HHHhcC--CeEEEeeccccCCCCCCHHHHHHHHhh-c
Confidence 5 57999999999999996 8999999877642 122334 35566666544 367899999988764 7
Q ss_pred CcEEEE-c-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhcccc--CCCCC---C--C---cc--EEEeCCCC
Q 012104 182 PKLIIC-G-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQE--AANPF---E--Y---CH--IVTTTTHK 244 (471)
Q Consensus 182 pklIi~-~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~--~~~p~---~--~---aD--iv~~s~~K 244 (471)
+|+|++ + +||+|..++. ++|.++|+++|++||+|++|. .+.+.+. .++.+ . . .+ |++.|++|
T Consensus 166 ~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK 244 (393)
T TIGR03538 166 CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS-ELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSK 244 (393)
T ss_pred ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh-hcccCCCCCCcCHHHhcccccccccccEEEEecchh
Confidence 898864 4 7899999985 566778899999999999997 5554421 11111 0 1 11 88999999
Q ss_pred c--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Q 012104 245 S--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA 322 (471)
Q Consensus 245 ~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na 322 (471)
+ ++|.|.||+++++ ++.+++.........+.+...+.++ ..++.. ...+++..+++.++.
T Consensus 245 ~~~~~GlRvG~~i~~~---------------~l~~~~~~~~~~~~~~~~~~~q~~~-~~~l~~--~~~~~~~~~~~~~~~ 306 (393)
T TIGR03538 245 RSNLPGLRSGFVAGDA---------------EILKAFLRYRTYHGCAMPIPTQLAS-IAAWND--EQHVRENRALYREKF 306 (393)
T ss_pred hcCCcccceEEEecCH---------------HHHHHHHHHHHhhccCcCHHHHHHH-HHHhcC--hHHHHHHHHHHHHHH
Confidence 5 7999999999886 4555444322111112222222222 223321 234566677777888
Q ss_pred HHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHH-HhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCc
Q 012104 323 VALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKL-CDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 323 ~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~-L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~ 398 (471)
+.+.+.|++. +.+ ..+.++.++|++++ .+..++.+. ++++||.+.+++.++.. .+...+++||++..
T Consensus 307 ~~~~~~L~~~-~~~-~~p~gg~f~~~~~~---~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~---- 377 (393)
T TIGR03538 307 AAVLEILGQV-LDL-ELPDAGFYLWPKVP---GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA---- 377 (393)
T ss_pred HHHHHHHHhh-Ccc-cCCCeeEEEEEECC---CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC----
Confidence 8888888764 333 23466778999986 345666555 57899999998765421 12235799999832
Q ss_pred CCCHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHR 414 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~ 414 (471)
.++++++..+.|.+
T Consensus 378 --~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 378 --PLEECVEAAERIRS 391 (393)
T ss_pred --CHHHHHHHHHHHHH
Confidence 25666665555543
No 114
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.92 E-value=7.9e-23 Score=204.47 Aligned_cols=314 Identities=18% Similarity=0.160 Sum_probs=211.7
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC-hHH
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS-GSP 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s-Gt~ 108 (471)
+.|+|..++|. .+|.+++++...+... .+|+.. . ..++ ++.++++++++.+ +|..++ +++
T Consensus 20 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~y~~~------~-~~~l----r~~ia~~~~~~~~----~i~~~~G~~~ 82 (346)
T TIGR01141 20 EVIKLNSNENPFGPPPKAKEALRAEADKL--HRYPDP------D-PAEL----KQALADYYGVDPE----QILLGNGSDE 82 (346)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHhHHHh--hcCCCC------C-HHHH----HHHHHHHhCcChH----HEEEcCCHHH
Confidence 56788777654 4788999988765321 123221 1 1233 4667888887653 344444 457
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~ 188 (471)
++..++.+++++||+|++.+|.|+.+.. .....| .+++.+++++ ++.+|++++++.+. .++++|+++
T Consensus 83 ~l~~~~~~l~~~gd~v~~~~p~y~~~~~---------~~~~~g--~~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~l~ 149 (346)
T TIGR01141 83 IIELLIRAFLEPGDAVLVPPPTYSMYEI---------SAKIHG--AEVVKVPLDE-DGQLDLEDILVAID-DKPKLVFLC 149 (346)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCHHHHHH---------HHHHcC--CeEEEeccCC-CCCCCHHHHHHhcC-CCCCEEEEe
Confidence 8888889999999999999998764421 112233 4555666663 47899999999764 478888754
Q ss_pred --CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCC-C-ccEEEeCCCCcC--CCCCeEEEEeeCCC
Q 012104 189 --GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE-Y-CHIVTTTTHKSL--RGPRAGMIFYRKGP 260 (471)
Q Consensus 189 --~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~-~-aDiv~~s~~K~l--~GprgG~i~~~~~~ 260 (471)
+||+|...+.+++.++|+.+ |+++++|++|. ++...+.....+. . ..++++|+||++ +|+|.|++++++
T Consensus 150 ~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-- 226 (346)
T TIGR01141 150 SPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA-- 226 (346)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH--
Confidence 78999999999999999988 99999999987 4433211111111 1 247889999996 578889999876
Q ss_pred CCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeC
Q 012104 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTG 339 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~ 339 (471)
++.+++.....+. +. +...+.+...++... .++++..+++.++++.+.+.|++. |+++. +
T Consensus 227 -------------~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~ 287 (346)
T TIGR01141 227 -------------EIIDALNKVRAPF--NL-SRLAQAAAIAALRDD--DFIEKTVEEINAERERLYDGLKKLPGLEVY-P 287 (346)
T ss_pred -------------HHHHHHHhccCCC--CC-CHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-C
Confidence 4555555433222 21 222223333334321 246777888889999999999887 88864 2
Q ss_pred CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 340 GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 340 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
....++|+++.. +.+++.+.|.++||.+.++..++. . .+++|+++. +++|++++.+.|
T Consensus 288 -~~g~~~~~~~~~---~~~~~~~~L~~~gI~v~~g~~f~~---~-~~~iRls~~-------~~~~i~~~~~~l 345 (346)
T TIGR01141 288 -SDANFVLIRFPR---DADALFEALLEKGIIVRDLNSYPG---L-PNCLRITVG-------TREENDRFLAAL 345 (346)
T ss_pred -CcCCEEEEecCC---CHHHHHHHHHHCCeEEEeCCCcCC---C-CCeEEEecC-------CHHHHHHHHHHh
Confidence 345678888753 678888888899999988754321 1 578999973 378899888765
No 115
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-22 Score=203.03 Aligned_cols=318 Identities=17% Similarity=0.142 Sum_probs=212.2
Q ss_pred cCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-H
Q 012104 31 CRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-S 107 (471)
Q Consensus 31 ~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t 107 (471)
++.|+|..++|.. ++.+++++.+.+.... .+||.. . ...+ ++.++++++++.+ +|..++| +
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~------~-~~~l----r~aia~~~~~~~~----~I~it~G~~ 87 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP------N-ADAL----RQAIAAYYGLDPE----QVFVGNGSD 87 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC------c-HHHH----HHHHHHHhCCCHH----HEEEcCCHH
Confidence 3568898888654 6788999876654322 233321 1 1222 4667778888764 3555555 4
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE-E
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI-I 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI-i 186 (471)
+|+..++.++++|||+|++++|.|+.+.. .....|. +++.++++ +++.+|++++++ +.++| +
T Consensus 88 ~al~~~~~~l~~~gd~vlv~~P~y~~~~~---------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~-----~~~~v~~ 150 (353)
T PRK05387 88 EVLAHAFLAFFNHDRPLLFPDITYSFYPV---------YAGLYGI--PYEEIPLD-DDFSIDVEDYLR-----PNGGIIF 150 (353)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCHHHHHH---------HHHHcCC--EEEEeecC-CCCCCCHHHHHh-----cCCEEEE
Confidence 79999999999999999999999865431 1123343 45555555 457899999864 23444 4
Q ss_pred Ec-CCCCCccccHHHHHHHHHHh-CCEEEEeccccchhhccccCCCCC-C--CccEEEeCCCCc--CCCCCeEEEEeeCC
Q 012104 187 CG-GSAYPRDWDYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPF-E--YCHIVTTTTHKS--LRGPRAGMIFYRKG 259 (471)
Q Consensus 187 ~~-~s~~g~~~d~~~i~~ia~~~-g~~livD~a~~~glv~~g~~~~p~-~--~aDiv~~s~~K~--l~GprgG~i~~~~~ 259 (471)
++ +||+|...+.+++.++++.+ ++++++|++|. .+ .+....++ . ...++++|++|+ ++|.|.||+++++
T Consensus 151 ~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~- 226 (353)
T PRK05387 151 PNPNAPTGIALPLAEIERILAANPDSVVVIDEAYV-DF--GGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP- 226 (353)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-cc--CCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH-
Confidence 55 78999999999999999886 99999999985 33 22111111 1 224899999998 5899999999876
Q ss_pred CCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeC
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~ 339 (471)
++.+.+..........+.+.....+...++.. ...+++..+++.++++.+.+.|++.|+.+. +
T Consensus 227 --------------~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~ 289 (353)
T PRK05387 227 --------------ELIEALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEALGFEVL-P 289 (353)
T ss_pred --------------HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeEC-C
Confidence 45555544321111112233333333334432 234567788888889999999998898764 2
Q ss_pred CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 340 GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 340 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..++++|+.+. +.+..++.+.|.++||.+... +. +...+++||++. .+++++++.+.|.+++.
T Consensus 290 -~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~---~~--~~~~~~iRis~~-------~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 290 -SKANFVFARHP--SHDAAELAAKLRERGIIVRHF---NK--PRIDQFLRITIG-------TDEEMEALVDALKEILA 352 (353)
T ss_pred -CcCcEEEEECC--CCCHHHHHHHHHHCCEEEEEC---CC--CCCCCeEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 34557788764 457788888889999999632 21 123578999973 36899999999988654
No 116
>PLN02721 threonine aldolase
Probab=99.92 E-value=2.4e-22 Score=201.45 Aligned_cols=323 Identities=18% Similarity=0.144 Sum_probs=202.6
Q ss_pred eeEecCCC-CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 34 IELIASEN-FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 34 i~li~s~n-~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
++|..+++ +.++.+++++...... . ...|| + ...+.+| +.+++++|.+. .+.+++|+.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~a~~~~~~~-----~-~~~~~-~-~~~~~l~----~~la~~~~~~~-----~~~~~~Gs~a~~~ 70 (353)
T PLN02721 8 VDLRSDTVTKPTDAMRAAMANAEVD-----D-DVLGY-D-PTALRLE----EEMAKIFGKEA-----ALFVPSGTMGNLI 70 (353)
T ss_pred hhhhcccccCCCHHHHHHHHhccCC-----C-cccCC-C-HHHHHHH----HHHHHHhCCce-----eEEecCccHHHHH
Confidence 45554443 4578888888542001 0 11222 2 2245555 56888999875 2556789999888
Q ss_pred HHHHhcC-CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh------CCCcEE
Q 012104 113 AYTAVLE-PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD------FRPKLI 185 (471)
Q Consensus 113 ~~~all~-pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~------~~pklI 185 (471)
++.++++ |||+|++.+++|.+....+. .....| .+++.++.+ +++.+|++++++.+.+ .++++|
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v 141 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGG------ISTLGG--VHPRTVKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLI 141 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccc------hhhhcC--ceeEecCCC-cCCCcCHHHHHHHHHhccCCCCCcceEE
Confidence 8888887 99999999987643221000 112233 345555555 4578999999999864 267888
Q ss_pred EE-c--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhc-cccCCCCC-CCccEEEeCCCCcCCCCCeEEEEee
Q 012104 186 IC-G--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVA-AQEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 186 i~-~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~-~g~~~~p~-~~aDiv~~s~~K~l~GprgG~i~~~ 257 (471)
++ + ++++|..+| +++|.++|+++|+++++|++|..+... .+..+..+ .++|.++.|+||++++|.|++++.+
T Consensus 142 ~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~ 221 (353)
T PLN02721 142 CLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGS 221 (353)
T ss_pred EEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecC
Confidence 75 3 346787777 578889999999999999998644211 12222222 2688889999999988877656665
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHH-HHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH-QIGAL-AVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GY 334 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~-~iaa~-a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~ 334 (471)
+ ++.+.+...... ..+++... ..++. ..+++. ..+..++..++++.+.+.|++. |+
T Consensus 222 ~---------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~~~ 280 (353)
T PLN02721 222 K---------------SFIRKAKRLRKT-LGGGMRQVGVLAAAALVALQE-----NVPKLEDDHKKAKLLAEGLNQIKGL 280 (353)
T ss_pred H---------------HHHHhHHHHHHh-cCCCeehhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5 444433221111 11122111 11111 122322 2223445567788999999887 77
Q ss_pred eE-eeCCCCCeeEEEEccC-CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 335 SL-VTGGTENHLVLWDLRP-LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 335 ~i-~~~~~~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
++ +.. ...+++++++.. .+.+...+.+.|.+.||.+.+. ...++|++++.. .+++|++++.+.|
T Consensus 281 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~---------~~~~lR~~~~~~----~~~~~i~~~~~~l 346 (353)
T PLN02721 281 RVNVAA-VETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPG---------NSSRIRVVTHHQ----ISDSDVQYTLSCF 346 (353)
T ss_pred EEecCC-ccceEEEEEccCCccccHHHHHHHHHhCCcEEecC---------CCceEEEEecCc----CCHHHHHHHHHHH
Confidence 55 333 335567888753 1246778888899999999764 236899997533 3589999999999
Q ss_pred HHHHH
Q 012104 413 HRAVT 417 (471)
Q Consensus 413 ~~~l~ 417 (471)
.+++.
T Consensus 347 ~~~~~ 351 (353)
T PLN02721 347 QQAAL 351 (353)
T ss_pred HHHhh
Confidence 88654
No 117
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.92 E-value=7.1e-22 Score=201.21 Aligned_cols=335 Identities=15% Similarity=0.094 Sum_probs=209.6
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC-CCCCceeeecCCh-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSG- 106 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~-~~~~~~~v~~~sG- 106 (471)
++.|+|..+++. +++.+.+++...+... ..|+... | ...+.+...+++.+.+|.+ .+.. -+|..++|
T Consensus 29 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~--~~Y~~~~---G---~~~lr~~ia~~~~~~~g~~~~~~~-~~i~it~G~ 99 (396)
T PRK09147 29 LPPISLSIGEPKHPTPAFIKDALAANLDGL--ASYPTTA---G---LPALREAIAAWLERRYGLPALDPA-TQVLPVNGS 99 (396)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHhhhh--cCCCCCC---C---CHHHHHHHHHHHHHHhCCCcCCcc-ceEEECCCh
Confidence 567888777753 3677888887655321 1233211 2 2234333445666666754 2110 14555555
Q ss_pred HHHHHHHHHHhcCC---CCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCC
Q 012104 107 SPANFAAYTAVLEP---HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRP 182 (471)
Q Consensus 107 t~A~~~~~~all~p---GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~p 182 (471)
++|+..++.++++| ||.|++++|.|.++.. .+...| .+++.++++++ ++.+|++++++.+.. ++
T Consensus 100 ~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g--~~~~~vp~~~~~~~~~d~~~l~~~~~~-~~ 167 (396)
T PRK09147 100 REALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG---------AALLAG--AEPYFLNCDPANNFAPDFDAVPAEVWA-RT 167 (396)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH---------HHHhcC--CEEEEeccCccccCccCHHHHHHHHhh-cc
Confidence 57999999999999 9999999999987642 122334 35566666643 468999999887753 78
Q ss_pred cEEEE-c-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-----C---cc--EEEeCCCCc
Q 012104 183 KLIIC-G-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-----Y---CH--IVTTTTHKS 245 (471)
Q Consensus 183 klIi~-~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-----~---aD--iv~~s~~K~ 245 (471)
|+|++ + +||+|..++.+ +|.++|++++++||+|++|. .+.+.+..+ +.+. . .+ +++.|++|.
T Consensus 168 k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 246 (396)
T PRK09147 168 QLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYS-EIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKR 246 (396)
T ss_pred EEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeecccc-ccccCCCCCCchhhhhccccCccccccEEEEeccccc
Confidence 88874 4 78999999765 55677899999999999997 555544211 1110 1 12 889999995
Q ss_pred --CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 012104 246 --LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (471)
Q Consensus 246 --l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~ 323 (471)
++|.|.||+++++ ++.+.+......... ++....+.+...++. ....+++..+++.++.+
T Consensus 247 ~~~~GlRiG~~~~~~---------------~l~~~~~~~~~~~~~-~~~~~~q~a~~~~~~--~~~~~~~~~~~~~~~~~ 308 (396)
T PRK09147 247 SNVPGLRSGFVAGDA---------------ALLKKFLLYRTYHGC-AMPPAVQAASIAAWN--DEAHVRENRALYREKFD 308 (396)
T ss_pred cCCccceeeeecCCH---------------HHHHHHHHHhhhccc-CCCHHHHHHHHHHhc--chhHHHHHHHHHHHHHH
Confidence 7999999999886 455545432211111 222222222222332 12345666777778888
Q ss_pred HHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHH-HHHHhhcCeEeccCCcCCCC---CCCCCCeeEEecCCCCCcC
Q 012104 324 ALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKV-EKLCDLCNITVNKNAVFGDS---SALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 324 ~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~-~~~L~~~gI~v~~~~~p~~~---~~~~~~~iRig~~~~t~~g 399 (471)
.+.+.|.+. +.+. .+..+.++|++++ .+..++ ..++++.||.+.++..++.. .....+++||++..
T Consensus 309 ~~~~~L~~~-~~~~-~p~~g~f~~~~~~---~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~----- 378 (396)
T PRK09147 309 AVTPILAPV-LDVQ-LPDAGFYLWAKVP---GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA----- 378 (396)
T ss_pred HHHHHHHHh-cCCC-CCCeeEEEEEECC---CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC-----
Confidence 888888764 4442 3456778899986 345666 45557889999988765421 12235789999832
Q ss_pred CCHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l 416 (471)
.++++++..+.|.+.+
T Consensus 379 -~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 379 -PLAECVEAAERIVDFC 394 (396)
T ss_pred -CHHHHHHHHHHHHHHh
Confidence 2456666666555543
No 118
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.92 E-value=6.6e-22 Score=202.36 Aligned_cols=344 Identities=19% Similarity=0.151 Sum_probs=212.8
Q ss_pred hccCCeeEecCCC------CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC--------CCC
Q 012104 29 RQCRGIELIASEN------FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH--------LDP 94 (471)
Q Consensus 29 ~~~~~i~li~s~n------~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg--------~~~ 94 (471)
..+..|+|..+.. +.++.+.+++...+......+|+.. .....+.+...+++.+.++ ++.
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~------~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~ 104 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPT------VGSPEAREAVATYWRNSFVHKESLKSTIKK 104 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCC------CCcHHHHHHHHHHHHhhccccccccCCCCh
Confidence 4456788865542 3578889988776653212234322 2223344333344444332 333
Q ss_pred CCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHH
Q 012104 95 TQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDK 172 (471)
Q Consensus 95 ~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~ 172 (471)
+ +|..++| ++|+..++.++++|||+|++.+|+|..+.. .+...|. +++.+++++ .++.+|+++
T Consensus 105 ~----~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g~--~~~~i~~~~~~~~~~d~~~ 169 (412)
T PTZ00433 105 D----NVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYET---------VCKAYGI--EMRFYNCRPEKDWEADLDE 169 (412)
T ss_pred h----hEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHH---------HHHHcCC--EEEEEecCccccCcCCHHH
Confidence 2 3444555 679999999999999999999999887642 1223343 445555553 356899999
Q ss_pred HHHHhhhCCCcEEEE-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccC-CCC--CC-C-ccEEEeCC
Q 012104 173 LEEKALDFRPKLIIC-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANP--FE-Y-CHIVTTTT 242 (471)
Q Consensus 173 le~~~~~~~pklIi~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p--~~-~-aDiv~~s~ 242 (471)
+++.+.. ++++|++ + +||+|..++ +++|.++|+++|++|++|++|. .+++.+.. ++. +. . .-|++.|+
T Consensus 170 l~~~~~~-~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~Sf 247 (412)
T PTZ00433 170 IRRLVDD-RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYA-GMVFNGATFTSVADFDTTVPRVILGGT 247 (412)
T ss_pred HHHHhcc-CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEecccc-ccccCCCCccchhhccCCCceEEEccc
Confidence 9988864 6887764 4 789998876 4566788999999999999997 77665432 211 11 1 13789999
Q ss_pred CCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 012104 243 HKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (471)
Q Consensus 243 ~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~ 320 (471)
+|+ ++|.|.||+++..+-. ... ++.+.+....... .+.+.. ...+++.++.......+++..+++.+
T Consensus 248 SK~~~~pGlRlG~~i~~~p~~-------~~~--~~~~~~~~~~~~~-~~~~~~-~q~a~~~~l~~~~~~~~~~~~~~~~~ 316 (412)
T PTZ00433 248 AKNLVVPGWRLGWLLLVDPHG-------NGG--DFLDGMKRLGMLV-CGPCSV-VQAALGEALLNTPQEHLEQIVAKLEE 316 (412)
T ss_pred hhhcCCCCeeEEEEEEeCCcc-------cHH--HHHHHHHHHhhcc-CCCChH-HHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 998 5899999999732100 000 2444443322111 122222 22333334443222345667778888
Q ss_pred HHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCC---CC-CHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 321 NAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPL---GL-TGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 321 na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~---~~-~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
+.+.+.+.|++. |+.+. .+.++.++|+.+... ++ +..++.+.| +++||.+.++..++ .++++||++..
T Consensus 317 ~r~~l~~~L~~~~~~~~~-~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----~~~~iRis~~~ 390 (412)
T PTZ00433 317 GAMVLYNHIGECIGLSPT-MPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH-----MPGFTRLTISR 390 (412)
T ss_pred HHHHHHHHHhcCCCCccc-CCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC-----CCCeEEEEecC
Confidence 888999999875 77653 345577888887531 22 455665554 57899998876553 14799999832
Q ss_pred CCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.++++++..+.|.++++.
T Consensus 391 ------~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 391 ------PVEVLREAVERIKAFCER 408 (412)
T ss_pred ------CHHHHHHHHHHHHHHHHH
Confidence 256677766666665543
No 119
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.2e-22 Score=201.71 Aligned_cols=321 Identities=17% Similarity=0.068 Sum_probs=215.9
Q ss_pred CCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-H
Q 012104 32 RGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (471)
Q Consensus 32 ~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~ 108 (471)
..++|..+++.. ++.+++++...+... .+|+.. . ...++ +.++++++++.+ +|..++|+ +
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~------~-~~~Lr----~~ia~~~~~~~~----~I~it~G~~~ 95 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEI--WKYGDP------E-NHDLR----HALAAHHGVAPE----NIMVGEGIDG 95 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC------c-cHHHH----HHHHHHhCCCHH----HEEEcCCHHH
Confidence 346898888654 788999987654321 133321 1 12333 566777888763 46667776 5
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE-
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC- 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~- 187 (471)
++..++.++++|||.|++.+|.|+++..+ +...|. +++.++++. ..+|++++++.+...++++|++
T Consensus 96 ~l~~~~~~~~~~gd~vlv~~p~y~~~~~~---------~~~~g~--~~~~vp~~~--~~~~~~~l~~~~~~~~~~~i~l~ 162 (369)
T PRK08153 96 LLGLIVRLYVEPGDPVVTSLGAYPTFNYH---------VAGFGG--RLVTVPYRD--DREDLDALLDAARRENAPLVYLA 162 (369)
T ss_pred HHHHHHHHhcCCCCEEEECCCcchHHHHH---------HHHcCC--eEEEeeCCC--CCCCHHHHHHHhcccCCcEEEEe
Confidence 77788888899999999999998876422 122333 444555442 3589999988776567888875
Q ss_pred c-CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCC--Cc-cEEEeCCCCcC--CCCCeEEEEeeCC
Q 012104 188 G-GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE--YC-HIVTTTTHKSL--RGPRAGMIFYRKG 259 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~--~a-Div~~s~~K~l--~GprgG~i~~~~~ 259 (471)
+ +||+|..++.+++.++++.. |++||+|++|. .+...+..+ ++. .. -+++.|++|++ +|.|.||+++++
T Consensus 163 ~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~- 239 (369)
T PRK08153 163 NPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP- 239 (369)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH-
Confidence 4 78999999999988887765 89999999987 555444222 222 11 28899999994 789999999976
Q ss_pred CCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeC
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~ 339 (471)
++.+.+.+...+. +.+....++...+++. ...+++..+...++.+.+.+.|++.|+.+.
T Consensus 240 --------------~~~~~l~~~~~~~---~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~-- 298 (369)
T PRK08153 240 --------------GTIKAFDKVRNHF---GMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARANGLTPL-- 298 (369)
T ss_pred --------------HHHHHHHHhhcCC---CCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC--
Confidence 4555454432221 2233333444444531 223466677777888888888988888653
Q ss_pred CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 340 GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 340 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+..++++|+++........++.+.|.+.||.+.. |+.. ...+++||++. .+++++++.+++++++..
T Consensus 299 p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~---p~~~--~~~~~iRis~~-------~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 299 PSATNFVAIDCGRDGAFARAVLDGLIARDIFVRM---PGVA--PLDRCIRVSCG-------PDEELDLFAEALPEALEA 365 (369)
T ss_pred CCcCcEEEEECCCCcccHHHHHHHHHHCCeEEee---CCCC--CCCCeEEEecC-------CHHHHHHHHHHHHHHHHH
Confidence 3456678888754334567788888889999952 2211 12469999973 378999999999987753
No 120
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.92 E-value=1.8e-22 Score=207.80 Aligned_cols=275 Identities=14% Similarity=0.118 Sum_probs=190.7
Q ss_pred eeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhh
Q 012104 100 NVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKAL 178 (471)
Q Consensus 100 ~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~ 178 (471)
+|..++| ++|+..++.++++|||+|++.+|+|+++.. .+...| .+++.++++. ..+|++++++++.
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~--~g~~~~~l~~~~~ 209 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSIN---------MLRYAG--FSASPVSVDA--EGMQPEKLERALA 209 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH---------HHHHcC--CeEEeeccCC--CCCCHHHHHHHHh
Confidence 3555555 479999999999999999999999987742 122334 4556666653 2489999999886
Q ss_pred hCCCcEEEE--c-CCCCCccccHH---HHHHHHHHh-CCEEEEeccccchhhccccCCCCCCC---ccEEEeCCCCcC-C
Q 012104 179 DFRPKLIIC--G-GSAYPRDWDYA---RFRAVADKC-GALLLCDMAHISGLVAAQEAANPFEY---CHIVTTTTHKSL-R 247 (471)
Q Consensus 179 ~~~pklIi~--~-~s~~g~~~d~~---~i~~ia~~~-g~~livD~a~~~glv~~g~~~~p~~~---aDiv~~s~~K~l-~ 247 (471)
. ++|+|++ + +||+|..++.+ +|.++|+++ +++|++|++|. .+.+.+ .++++.. --+++.|++|++ +
T Consensus 210 ~-~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~-~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~ 286 (431)
T PRK15481 210 Q-GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFA-LLSSSP-YHSVIPQTTQRWALIRSVSKALGP 286 (431)
T ss_pred c-CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchh-hhccCC-CCCCCcCCCCCEEEEeeeccccCC
Confidence 4 7887764 3 78999999986 788899999 99999999986 554433 2233331 128899999995 7
Q ss_pred CCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Q 012104 248 GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS-TPAFKAYAKQVKANAVALG 326 (471)
Q Consensus 248 GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~-~~~~~~~~~~~~~na~~l~ 326 (471)
|.|.||+++++ ++.+.+.........+ .+.....+.+.++..-. ...+++..+.+.++.+.+.
T Consensus 287 GlRiG~~i~~~---------------~~~~~~~~~~~~~~~~-~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~ 350 (431)
T PRK15481 287 DLRLAFVASDS---------------ATSARLRLRLNSGTQW-VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLA 350 (431)
T ss_pred CceeEEEeCCH---------------HHHHHHHHHHhccccC-CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHH
Confidence 78999999886 4555554322222222 22223334444554311 1124566777788888899
Q ss_pred HHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 327 NYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 327 ~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
+.|++.|+.+. .+.+++++|++++. +..++.+.|.++||.+.++..++... ..+++||++... .+++++
T Consensus 351 ~~L~~~~~~~~-~p~gg~f~~~~l~~---~~~~~~~~l~~~gV~v~pg~~f~~~~--~~~~iRis~~~~-----~~~~i~ 419 (431)
T PRK15481 351 RALQQYGIAIP-SPGDGLNLWLPLDT---DSQATALTLAKSGWLVREGEAFGVSA--PSHGLRITLSTL-----NDAEIN 419 (431)
T ss_pred HHHHHcCCccc-cCCCeEEEEEECCC---CHHHHHHHHHHCCcEEecCCccccCC--CCCeEEEEcCCC-----ChHHHH
Confidence 99988888753 34567888999853 45677777888999999987664321 236899998432 368899
Q ss_pred HHHHHHHHHHH
Q 012104 407 QIGEFLHRAVT 417 (471)
Q Consensus 407 ~l~~~i~~~l~ 417 (471)
+.++.|.+++.
T Consensus 420 ~~~~~l~~~~~ 430 (431)
T PRK15481 420 RLAADLHQALN 430 (431)
T ss_pred HHHHHHHHHhc
Confidence 98888887753
No 121
>PRK08175 aminotransferase; Validated
Probab=99.92 E-value=1.6e-21 Score=198.52 Aligned_cols=339 Identities=16% Similarity=0.103 Sum_probs=209.1
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..+... .++.+.+++...+.+....+|+. ......+.+...+++.+.+|..-+. .-++..++|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~g~~~~~-~~~i~~t~G~~ 101 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYST------SRGIPRLRRAISRWYQDRYDVDIDP-ESEAIVTIGSK 101 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHHHHHhCCCCCC-CCcEEEccCcH
Confidence 455677544322 34556666655443221122321 1222344444445555555643211 0135555665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLI 185 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklI 185 (471)
+++..++.++++|||+|++.+|.|+.+.. .+...| .+++.++++++ ..+.++++++++.. ++++|
T Consensus 102 ~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v 168 (395)
T PRK08175 102 EGLAHLMLATLDHGDTVLVPNPSYPIHIY---------GAVIAG--AQVRSVPLVEG--VDFFNELERAIRESYPKPKMM 168 (395)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHH---------HHHHcC--CeEEEEecccC--CCcHHHHHHHHhhccCCceEE
Confidence 68888889999999999999999887642 112334 35556666543 34588899888643 67877
Q ss_pred EEc--CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCC---C-Ccc--EEEeCCCCcC--CCCCeE
Q 012104 186 ICG--GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---E-YCH--IVTTTTHKSL--RGPRAG 252 (471)
Q Consensus 186 i~~--~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~-~aD--iv~~s~~K~l--~GprgG 252 (471)
+++ +||+|..++. ++|.++|+++|+++|+|++|. .+.+.+..+.++ + ..| +++.|++|++ +|.|.|
T Consensus 169 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG 247 (395)
T PRK08175 169 ILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYA-DIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIG 247 (395)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchH-hhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhhe
Confidence 754 6899999988 577788999999999999997 566544322222 2 133 6789999995 788999
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
|++.++ ++.+.+.+.......+.+...+. +...++... ...+++..+.+.++++.+.+.|++.
T Consensus 248 ~~~~~~---------------~l~~~~~~~~~~~~~~~~~~~q~-~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (395)
T PRK08175 248 FMVGNP---------------ELVSALARIKSYHDYGTFTPLQV-AAIAALEGD-QQCVRDIAEQYKRRRDVLVKGLHEA 310 (395)
T ss_pred eeeCCH---------------HHHHHHHHHHhhcccCCCcHHHH-HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999876 45555543221111122222222 223344321 2345666777788888999999988
Q ss_pred CceEeeCCCCCeeEEEEccCC--CCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPL--GLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~--~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
|+.+. .+.++.++|++++.. ..+..++. ++++++||.|.++..++.. .++++||++. . .++.+.+..
T Consensus 311 ~~~~~-~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~---~~~~lRis~~--~----~~~~~~~al 380 (395)
T PRK08175 311 GWMVE-MPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDY---GDTHVRFALI--E----NRDRIRQAI 380 (395)
T ss_pred CCccc-CCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcC---CCCeEEEEeC--C----CHHHHHHHH
Confidence 88763 345677889998642 22456675 4567899999987665422 3468999973 1 256666666
Q ss_pred HHHHHHHH
Q 012104 410 EFLHRAVT 417 (471)
Q Consensus 410 ~~i~~~l~ 417 (471)
+.|.+++.
T Consensus 381 ~~l~~~l~ 388 (395)
T PRK08175 381 RGIKAMFR 388 (395)
T ss_pred HHHHHHHH
Confidence 65555553
No 122
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.8e-22 Score=203.01 Aligned_cols=315 Identities=17% Similarity=0.180 Sum_probs=212.3
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-HH
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t~ 108 (471)
+.++|..++|. .+|.+++++...+.. . ..||.. ....+ ++.++++++++.+ +|..++| ++
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~~p~~-------g~~~l----r~~ia~~~~~~~~----~i~~t~G~~~ 92 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLDE-L-ALYPDG-------YAPEL----RTKVAKHLGVDEE----QLLFGAGLDE 92 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHH-h-hcCCCC-------cHHHH----HHHHHHHhCCCHH----HEEECCCHHH
Confidence 56788777764 478899988765532 1 112211 12233 3567778888653 3445555 46
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-E
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-C 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~ 187 (471)
++..++.++++|||+|++.+|.|+++.. .....|. +++.++++ ++.+|++++++.+.. ++++|+ +
T Consensus 93 ~l~~~~~~~~~~gd~v~~~~p~y~~~~~---------~~~~~g~--~~~~~~~~--~~~~d~~~l~~~~~~-~~~~v~i~ 158 (359)
T PRK03158 93 VIQMISRALLNPGTNTVMAEPTFSQYRH---------NAIIEGA--EVREVPLK--DGGHDLEAMLKAIDE-QTKIVWIC 158 (359)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHH---------HHHHcCC--eEEEEecC--CCCcCHHHHHHhcCC-CCCEEEEe
Confidence 8888888999999999999999876531 1123343 44455544 467999999988753 788776 5
Q ss_pred c-CCCCCccccHHHHHHHHHH--hCCEEEEeccccchhhccccCCCCCC-----CccEEEeCCCCcC--CCCCeEEEEee
Q 012104 188 G-GSAYPRDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE-----YCHIVTTTTHKSL--RGPRAGMIFYR 257 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~-----~aDiv~~s~~K~l--~GprgG~i~~~ 257 (471)
+ +||+|..++.+++.++++. +|++||+|++|. .+.+.+..+.++. ...+++.|++|++ +|.|.||++++
T Consensus 159 ~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 237 (359)
T PRK03158 159 NPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS 237 (359)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC
Confidence 5 7899999999999999987 499999999997 5544433333222 1248889999995 68899999987
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+.....+ .+.+.. ...+.+.++.. ....++..+...++.+.+.+.|++.|+.+.
T Consensus 238 ~---------------~~~~~~~~~~~~--~~~~~~-~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 297 (359)
T PRK03158 238 E---------------ELIEKLNIARPP--FNTTRI-AQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEYGLFYY 297 (359)
T ss_pred H---------------HHHHHHHHhcCC--CCCCHH-HHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCeeC
Confidence 6 455555544322 222222 22333334432 223455666667777888888888888774
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
. ..+.++|+++. .+..++.+.|.++||.+.++..++ .++++||++. ..++++++.+.|+++
T Consensus 298 ~--~~g~~i~~~~~---~~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRi~~~-------~~~~~~~l~~al~~~ 358 (359)
T PRK03158 298 P--SQTNFIFVDTG---RDANELFEALLKKGYIVRSGAALG-----FPTGVRITIG-------LKEQNDKIIELLKEL 358 (359)
T ss_pred C--CcCcEEEEECC---CCHHHHHHHHHHCCeEEeeCCCCC-----CCCeEEEecC-------CHHHHHHHHHHHHHh
Confidence 3 23457888773 356778788888999999876553 2478999973 378999999999875
No 123
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.91 E-value=3e-22 Score=208.66 Aligned_cols=303 Identities=14% Similarity=0.071 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHhc-CCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 75 ~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
...+.+...+++.+..|.+.+. -+|..++| ++|+..++.+++ +|||+|++++|.|.++.. .+...|
T Consensus 117 ~~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~---------~~~~~g- 184 (481)
T PTZ00377 117 YPFVRKAVAAFIERRDGVPKDP--SDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSA---------AITLLG- 184 (481)
T ss_pred CHHHHHHHHHHHHHhcCCCCCh--hhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHH---------HHHHcC-
Confidence 3344444445666555654322 24555555 579999999998 799999999999987642 122334
Q ss_pred eeEEEeeeecCC-CCCCCHHHHHHHhhhC-----CCcEEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccch
Q 012104 153 YFESLPYKVNSS-TGYIDYDKLEEKALDF-----RPKLII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 153 ~~~~~~~~v~~~-~~~iD~~~le~~~~~~-----~pklIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~g 221 (471)
.+++.++++++ ++.+|++++++.+... ++|+|+ ++ +||+|.+++ +++|.++|+++|++||+|++|. .
T Consensus 185 -~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~-~ 262 (481)
T PTZ00377 185 -GKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQ-E 262 (481)
T ss_pred -CEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhH-h
Confidence 35566666643 4689999999988642 688655 55 789999998 5677788999999999999997 6
Q ss_pred hhccc--cCCCC------CC-C---c-c-EEEeCCCCcC---CCCCeEEEEe---eCCCCCCCCCCCCCcccchHhhhhh
Q 012104 222 LVAAQ--EAANP------FE-Y---C-H-IVTTTTHKSL---RGPRAGMIFY---RKGPKPPKKGQPEGAVYDFEDKINF 281 (471)
Q Consensus 222 lv~~g--~~~~p------~~-~---a-D-iv~~s~~K~l---~GprgG~i~~---~~~~~~~~~~~~~i~~~~l~~~i~~ 281 (471)
+++.+ .+++. +. . . . |++.|++|++ +|+|.||+++ ++ ++.+.+.+
T Consensus 263 l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~---------------~li~~l~~ 327 (481)
T PTZ00377 263 NIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPP---------------EVREQIYK 327 (481)
T ss_pred hccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCH---------------HHHHHHHH
Confidence 66632 22221 11 1 1 1 6789999973 7999999987 44 45555554
Q ss_pred cCCCCCCCCCcHHHHHHHHHHHHHh--ccH-------HHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEcc
Q 012104 282 AVFPSLQGGPHNHQIGALAVALKQA--STP-------AFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (471)
Q Consensus 282 ~~~~~~~g~p~~~~iaa~a~al~~~--~~~-------~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~ 351 (471)
..... .+.+...+ .+.+.++... ... +.++..+++.++++.+.+.|++. |+++. .+.+++++|+++.
T Consensus 328 ~~~~~-~~~~~~~Q-~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~-~p~gg~fl~~~~~ 404 (481)
T PTZ00377 328 LASIN-LCSNVVGQ-LMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQ-PVEGAMYAFPRIE 404 (481)
T ss_pred Hhhee-cCCChHHH-HHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEee-cCCeeEEEEeecc
Confidence 33222 12222333 3333444210 011 12222234567778888999887 88874 4556778887764
Q ss_pred -CCC---------C-CHH-HHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 352 -PLG---------L-TGN-KVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 352 -~~~---------~-~~~-~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+.+ + +.. .+..+|++.||.+.+++.++.. ...+++||++. ++ ++++++..+.|.+.++
T Consensus 405 l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~--~~~~~~Rls~~--~~----~e~l~~~l~rl~~~~~ 474 (481)
T PTZ00377 405 LPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQK--PGTYHFRITIL--PP----EEQIEEMVKKIKEFHE 474 (481)
T ss_pred CchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCC--CCCCEEEEEEC--CC----HHHHHHHHHHHHHHHH
Confidence 111 1 122 2468889999999988766531 13468999983 22 5666666666665554
No 124
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=1.4e-22 Score=203.72 Aligned_cols=313 Identities=16% Similarity=0.186 Sum_probs=212.2
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.|.|..++|. +++.+++++.+.+.+.. .||.. | ...+ ++.+++++|++.+ +|..++|+
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~--~Yp~~----g---~~~L----r~aia~~~~~~~~----~I~vt~Gs~ 91 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHA--LYPDG----G---ATTL----RQTIANKLHVKME----QVLCGSGLD 91 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcC--cCCCC----C---HHHH----HHHHHHHhCCCcc----eEEECCCHH
Confidence 467899888876 47889999876654321 23321 1 1222 3556778898874 45555665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII- 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi- 186 (471)
+++..++.++++|||+|++.+|+|.++.. .+...|. +++.++++ ++.+|++++++.+. .++++|+
T Consensus 92 e~i~~~~~~l~~~gd~vlv~~P~y~~~~~---------~~~~~g~--~v~~v~~~--~~~~d~~~l~~~~~-~~~~~v~i 157 (366)
T PRK01533 92 EVIQIISRAVLKAGDNIVTAGATFPQYRH---------HAIIEGC--EVKEVALN--NGVYDLDEISSVVD-NDTKIVWI 157 (366)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCcHHHHHH---------HHHHcCC--EEEEeecC--CCCcCHHHHHHHhC-cCCcEEEE
Confidence 68999999999999999999999887642 1223443 44555554 35799999999885 3678776
Q ss_pred Ec-CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCC----C-ccEEEeCCCCc--CCCCCeEEEEe
Q 012104 187 CG-GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE----Y-CHIVTTTTHKS--LRGPRAGMIFY 256 (471)
Q Consensus 187 ~~-~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~----~-aDiv~~s~~K~--l~GprgG~i~~ 256 (471)
++ +||+|..++.+++.++++.. +.++++|++|. .+...+..++.+. + --|++.|++|+ ++|.|.||+++
T Consensus 158 ~~P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~ 236 (366)
T PRK01533 158 CNPNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG 236 (366)
T ss_pred eCCCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC
Confidence 55 78999999988877776532 34778899996 6654432222222 1 12889999999 58999999998
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
++ ++.+.+.+...+. +++.....+...+++. .+..++..+...++.+.+.+.++..|+++
T Consensus 237 ~~---------------~~~~~l~~~~~~~---~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~g~~~ 296 (366)
T PRK01533 237 HE---------------ELIEKLNVVRLPF---NVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKENEIPF 296 (366)
T ss_pred CH---------------HHHHHHHHhcCCC---CcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 76 5666665543222 2233333333344432 22335566667777888888888888876
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.. + ++.++|+.+. +..++.+.|.++||.|.+ . ++++||++. +.++++++.++|.+++
T Consensus 297 ~~-~-~~nf~~~~~~----~~~~~~~~l~~~GI~Vr~----~------~~~iRis~~-------~~~~~~~l~~al~~~~ 353 (366)
T PRK01533 297 YQ-S-QTNFIFLPVE----NGGEIYEACAHAGFIIRP----F------PNGVRITVG-------TREQNEGVISVLQQHF 353 (366)
T ss_pred CC-C-cCcEEEEeCC----CHHHHHHHHHHCCcEEcc----C------CCceEEeCC-------CHHHHHHHHHHHHHHH
Confidence 43 3 4557888873 456788889999999985 1 367999972 2689999999999876
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
..
T Consensus 354 ~~ 355 (366)
T PRK01533 354 EN 355 (366)
T ss_pred Hh
Confidence 54
No 125
>PLN02231 alanine transaminase
Probab=99.91 E-value=4.6e-22 Score=207.94 Aligned_cols=360 Identities=13% Similarity=0.083 Sum_probs=213.8
Q ss_pred cccChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC
Q 012104 13 ETVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL 92 (471)
Q Consensus 13 ~~~d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~ 92 (471)
.+.++..+.-+.... ...+.|++-+++...|..+++.....+.+..... ..-|+.......+.+...+++.+..|.
T Consensus 112 ~~~~~~~~r~v~~~~-~~p~~i~~~~~~~~fp~~~i~~a~~~l~~~~~~~---~~~Y~~s~G~~~lReaIA~~~~~r~g~ 187 (534)
T PLN02231 112 GQQPITFFREVLALC-DHPSLLDKSETHGLFSADAIERAWQILDQIPGRA---TGAYSHSQGIKGLRDAIAAGIEARDGF 187 (534)
T ss_pred CCCccHHHHHHHHhc-cCCccCCCCCccccCCHHHHHHHHHHHHhcCCcc---ccCcCCCCCcHHHHHHHHHHHHhccCC
Confidence 344444443333221 2235567766666667777776665554322100 011222233344544445666665565
Q ss_pred CCCCCceeeecCCh-HHHHHHHHHHhc-CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCC
Q 012104 93 DPTQWGVNVQPYSG-SPANFAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYID 169 (471)
Q Consensus 93 ~~~~~~~~v~~~sG-t~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD 169 (471)
+.+. .+|..++| ++|+..++.+++ .|||.|+++.|.|+++.. .+...| .++++++++++ ++.+|
T Consensus 188 ~~~p--e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~---------~~~~~g--~~~v~~~l~~~~~~~~d 254 (534)
T PLN02231 188 PADP--NDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSA---------SIALHG--GTLVPYYLDEATGWGLE 254 (534)
T ss_pred CCCc--ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHH---------HHHHcC--CEEEEEecCcccCCCCC
Confidence 4322 24555555 579999999998 489999999999987642 122334 35667776754 47899
Q ss_pred HHHHHHHhhhC-----CCcEEE-Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcc-ccCCCCCC-----
Q 012104 170 YDKLEEKALDF-----RPKLII-CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAA-QEAANPFE----- 233 (471)
Q Consensus 170 ~~~le~~~~~~-----~pklIi-~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~-g~~~~p~~----- 233 (471)
+++|++.++.. ++|+|+ ++ +||+|.+++.+ +|.++|+++|++||+|++|. .+++. +..+.++.
T Consensus 255 ~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~-~l~y~~~~~~~s~~~~~~~ 333 (534)
T PLN02231 255 ISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQ-ENVYVPDKKFHSFKKVARS 333 (534)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCcccHHHHHhh
Confidence 99999988642 578655 55 78999999765 56688999999999999997 66663 22211211
Q ss_pred ----Ccc---EEEeCCCCc---CCCCCeEEEEee--CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHH
Q 012104 234 ----YCH---IVTTTTHKS---LRGPRAGMIFYR--KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAV 301 (471)
Q Consensus 234 ----~aD---iv~~s~~K~---l~GprgG~i~~~--~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~ 301 (471)
.-+ +++.|++|. ++|.|+||+++. ++ ++.+.+.+..... .+++...+++ ...
T Consensus 334 ~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~--------------~l~~~l~k~~~~~-~~s~~~~Q~~-~~~ 397 (534)
T PLN02231 334 MGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTS--------------DVREQIYKVASVN-LCSNISGQIL-ASL 397 (534)
T ss_pred hccccCCceEEEEeccCcccccCCccceEEEEEecCCH--------------HHHHHHHHHHhhh-cCCChHHHHH-HHH
Confidence 112 667899996 369999999863 22 4555444322211 2233333332 222
Q ss_pred HHHHh--ccHHHH-------HHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEcc--CCCC---------CHHHH
Q 012104 302 ALKQA--STPAFK-------AYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR--PLGL---------TGNKV 360 (471)
Q Consensus 302 al~~~--~~~~~~-------~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~--~~~~---------~~~~~ 360 (471)
++..- ..+.++ +..+.+.++++.+.+.|++. |+.+. .+.+++++|+++. ...+ +...+
T Consensus 398 ~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~-~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~ 476 (534)
T PLN02231 398 VMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN-KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFY 476 (534)
T ss_pred HhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHH
Confidence 33210 011222 33566788888999999887 88874 4567888886553 1111 12223
Q ss_pred -HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 361 -EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 361 -~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.++|++.||.+.+++.++.. ....++|+++ .++ ++++++..+.|.+.
T Consensus 477 ~~~Ll~~~GV~vvPGs~Fg~~--~g~~~~Rit~--~~~----~e~l~eal~RL~~~ 524 (534)
T PLN02231 477 CKRLLNATGIVVVPGSGFGQV--PGTWHFRCTI--LPQ----EDKIPAIVSRLTEF 524 (534)
T ss_pred HHHHHHhcCEEEeCCcccCCC--CCCCeEEEEe--CCC----HHHHHHHHHHHHHH
Confidence 56778899999998877532 1245799998 333 45554444444443
No 126
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=5.3e-22 Score=205.46 Aligned_cols=344 Identities=17% Similarity=0.130 Sum_probs=212.1
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhhhc----cCC-C-CCCCCCCCCcchhHHHHHHHHHHHHHHhcC----CCCCCCceee
Q 012104 32 RGIELIASENFTSFAVIEALGSALTN----KYS-E-GMPGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNV 101 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l~~----~~~-~-g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg----~~~~~~~~~v 101 (471)
..|+|..+||..+..+++.......+ .+. . -.....+|+.......+.+...+++.+.+| ++.+ +|
T Consensus 39 g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~----~I 114 (468)
T PLN02450 39 GIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN----KL 114 (468)
T ss_pred eeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH----He
Confidence 46999999998766655554333211 000 0 000111222222233444444456665555 3332 45
Q ss_pred ecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccce-eccceeEEEeeeecC-CCCCCCHHHHHHHhh
Q 012104 102 QPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNS-STGYIDYDKLEEKAL 178 (471)
Q Consensus 102 ~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~-~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~ 178 (471)
..++|+ +++..++.++++|||.|++++|.|+++.. .+. ..| .++++++.+. +++.+|++++++.++
T Consensus 115 iit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~---------~~~~~~g--~~~v~v~~~~~~~~~~~~~~le~~~~ 183 (468)
T PLN02450 115 VLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR---------DLKWRTG--VEIVPIHCSSSNGFQITESALEEAYQ 183 (468)
T ss_pred EEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH---------HHhhcCC--cEEEEEecCCccCCcCCHHHHHHHHH
Confidence 666665 68999999999999999999999987642 111 234 3566666552 456789999998876
Q ss_pred h-----CCCcEEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhcccc-CCCCCC-----------Ccc
Q 012104 179 D-----FRPKLII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQE-AANPFE-----------YCH 236 (471)
Q Consensus 179 ~-----~~pklIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~~-----------~aD 236 (471)
+ .++|+|+ ++ +||+|..++.++ |.++|+++|++||+|++|. ++.+.+. ..+.+. ..+
T Consensus 184 ~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~-~~~f~~~~~~s~l~~~~~~~~~~~~~~~ 262 (468)
T PLN02450 184 QAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYS-GTVFDSPGFVSVMEVLKDRKLENTDVSN 262 (468)
T ss_pred HHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccc-ccccCCCCcccHHHHhhhcccccCCCCC
Confidence 4 3688665 55 789999998764 5577889999999999997 5555432 212111 012
Q ss_pred --EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhc--cHH
Q 012104 237 --IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS--TPA 310 (471)
Q Consensus 237 --iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~--~~~ 310 (471)
+++.|++|+ ++|.|.|+++++++ .+.+.+.+.. .. +..+.....+++.++..-. ...
T Consensus 263 ~vi~l~S~SK~~~l~GlRiG~li~~~~--------------~l~~~~~~~~-~~--~~~s~~~Q~a~~~~L~~~~~~~~~ 325 (468)
T PLN02450 263 RVHIVYSLSKDLGLPGFRVGAIYSNDE--------------MVVSAATKMS-SF--GLVSSQTQYLLSALLSDKKFTKNY 325 (468)
T ss_pred cEEEEEeccccCCCCCccEEEEEECCH--------------HHHHHHHHHh-hc--CCCCHHHHHHHHHHhCCchhHHHH
Confidence 789999998 58999999999863 2333333321 11 1112222233333443210 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC----CCC-HHH-HHHHHhhcCeEeccCCcCCCCCCCC
Q 012104 311 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL----GLT-GNK-VEKLCDLCNITVNKNAVFGDSSALA 384 (471)
Q Consensus 311 ~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~----~~~-~~~-~~~~L~~~gI~v~~~~~p~~~~~~~ 384 (471)
+++..+++.++.+.+.+.|++.|+.+. .+.++.++|++++.. ... ..+ +.++++++||.+.++..++.. .
T Consensus 326 l~~~~~~l~~rr~~l~~~L~~~gi~~~-~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~---~ 401 (468)
T PLN02450 326 LEENQKRLKQRQKKLVSGLEAAGIKCL-KSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCT---E 401 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccc-CCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCC---C
Confidence 455677778888889999998888764 445677889998531 111 122 345567899999988765432 3
Q ss_pred CCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 385 PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 385 ~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
++++||++... .++++++..+.|.+++.
T Consensus 402 ~g~~Rl~f~~~-----~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 402 PGWFRVCFANM-----SEETLDLAMKRLKSFVE 429 (468)
T ss_pred CCEEEEEecCC-----CHHHHHHHHHHHHHHHH
Confidence 57999998432 35677777666666654
No 127
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=2.8e-22 Score=199.43 Aligned_cols=302 Identities=15% Similarity=0.104 Sum_probs=190.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCE
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDR 123 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~ 123 (471)
.|.+.++....+ .+|. | ..+....+| +.+++++|.+.+ ..+.++||++||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~-~~~~-g--------~~~~~~~Le----~~lA~~~g~~~e---~ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELL-ETYV-G--------PAIFEEKVQ----ELGREHLGGPEE---KILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHH-HHhc-C--------CHHHHHHHH----HHHHHHcCCCcc---eEEEECCHHHHHHHHHHHhCCCCCE
Confidence 678888766554 3342 2 123444554 678999999553 2355678889999999999999999
Q ss_pred EEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE-cCCCCCcc---ccHH
Q 012104 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC-GGSAYPRD---WDYA 199 (471)
Q Consensus 124 Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~-~~s~~g~~---~d~~ 199 (471)
|+++.|..+.|.+.. ..+...|. +++.+ .|+++++. . .++++|++ +.|+.|.. .|++
T Consensus 98 Vli~~~d~p~~~s~~------~~~~l~ga--~~~~~--------~~l~~l~~-~--~~~~lIiitg~s~~G~v~~~~~L~ 158 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP------RSCKLAGA--EYFES--------DELSELKK-I--DGTSLVVITGSTMDLKVVSEEDLK 158 (346)
T ss_pred EEECCCCCCCchhHH------HHHHHcCC--EEecc--------CCHHHHhh-C--cCceEEEEECCCCCCcccCHHHHH
Confidence 998655444443211 01223343 22211 24555432 2 35777664 47777776 5788
Q ss_pred HHHHHHHHhCCEEEEeccccchhhcc-ccCCCCCC-CccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHh
Q 012104 200 RFRAVADKCGALLLCDMAHISGLVAA-QEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFED 277 (471)
Q Consensus 200 ~i~~ia~~~g~~livD~a~~~glv~~-g~~~~p~~-~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~ 277 (471)
+|.++|+++|++|++|++|+.|.... +.. .... ++|++++|+||+|+|+|+|++++++ ++.+
T Consensus 159 ~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKalaG~r~G~v~~~~---------------~li~ 222 (346)
T TIGR03576 159 RVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLMDGPRGGLLAGRK---------------ELVD 222 (346)
T ss_pred HHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhccccceEEEEeCH---------------HHHH
Confidence 88899999999999999998664321 111 1112 4689999999999999999999987 5566
Q ss_pred hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCH
Q 012104 278 KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTG 357 (471)
Q Consensus 278 ~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~ 357 (471)
.+.+...+...+.+.. .+++...+|+... .+...+...++.+.+.+.+.+ +.+... ...++|+++... -+.
T Consensus 223 ~l~~~~~~~~~s~~~~-~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~--~~~~~~--~~~f~~~~~~~~-~~~ 293 (346)
T TIGR03576 223 KIKSVGEQFGLEAQAP-LLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK--LNVERT--PTGFVIKGVEEE-KLI 293 (346)
T ss_pred HHHHhhcCcccCccHH-HHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh--CCCCcC--CCeEEEEeCCCC-CHH
Confidence 6655444433333333 4444455675432 234455666666666676763 444322 233788887531 123
Q ss_pred HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHH---HHHHHHHHHHHHH
Q 012104 358 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEK---DFEQIGEFLHRAV 416 (471)
Q Consensus 358 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~---d~~~l~~~i~~~l 416 (471)
+.+.++|++.||.|.+++.+. ..++++||++. +. ++ +++++.++|++.+
T Consensus 294 ~~~~~ll~~~gV~v~~~~~f~----~~~~~vRis~~--~~----~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 294 EIGLDLLRNYGIITITAVGMP----GASKTLRFDLA--AK----DAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HHHHHHHHhCCEEEeCCcccC----CCCCeEEEEEe--cC----hHHhcCHHHHHHHHHhcc
Confidence 566899999999998764331 12579999872 21 23 6899988887643
No 128
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.91 E-value=5.2e-22 Score=202.80 Aligned_cols=331 Identities=19% Similarity=0.164 Sum_probs=215.1
Q ss_pred eEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHH
Q 012104 35 ELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (471)
Q Consensus 35 ~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A 109 (471)
....|.+|+ .|+|++++...+. +|..|..+.|...| .+...++| +++++++|.+. .+.++||+.|
T Consensus 48 ~~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~A 117 (406)
T PRK13393 48 TVWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVS 117 (406)
T ss_pred EEeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHH
Confidence 345677886 6899999988774 45445545554333 33444554 67889999764 4667899999
Q ss_pred HHHHHHHhcC--CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---CCCcE
Q 012104 110 NFAAYTAVLE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---FRPKL 184 (471)
Q Consensus 110 ~~~~~~all~--pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---~~pkl 184 (471)
|..++.++.. +||.|+.....|+..+. .+...+. +...++ ..|++.+++.++. .++++
T Consensus 118 n~~ai~~l~~~~~g~~I~~~~~~H~s~~~---------~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~~~~~ 180 (406)
T PRK13393 118 NWAALSTLGSRLPGCVILSDELNHASMIE---------GIRHSRA--EKRIFR------HNDPADLERKLSDLDPHRPKL 180 (406)
T ss_pred HHHHHHHhhcCCCCCEEEEccchhHHHHH---------HHHHcCC--eEEEeC------CCCHHHHHHHHHhccCCCCEE
Confidence 9999998765 88888877766654321 1122332 222232 3578888887753 24677
Q ss_pred EEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-cc--CC-CCC-CCccEEEeCCCCcCCCCCeEEEEee
Q 012104 185 IICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QE--AA-NPF-EYCHIVTTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 185 Ii~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~--~~-~p~-~~aDiv~~s~~K~l~GprgG~i~~~ 257 (471)
|++. .|++|...|+++|+++|+++|+++++|++|+.|+... |. .. ..+ +..|++++|++|.+.+ .||+++++
T Consensus 181 v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~GG~~~~~ 259 (406)
T PRK13393 181 VAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MGGYITGS 259 (406)
T ss_pred EEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cCceeeCC
Confidence 7654 6789999999999999999999999999998776432 11 10 111 2358999999999854 57898876
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
+ ++.+.+.....+.. .++.+....++...+++..... ....++..++.++|.+.|++.|+++
T Consensus 260 ~---------------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~ 322 (406)
T PRK13393 260 A---------------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKAGIPH 322 (406)
T ss_pred H---------------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 6 44444443222221 2333444445555667654322 1233556788899999998888876
Q ss_pred eeCCCCCeeEEEEccCCCCCHHHHHHHHhh-cCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 337 VTGGTENHLVLWDLRPLGLTGNKVEKLCDL-CNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 337 ~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.+ .+.++.+.+.. ..+..++.+.|.+ +||.+++...|.. |...+.+||+.+..++ ++|++++.+.|.++
T Consensus 323 ~~~--~~~i~~v~~~~-~~~~~~l~~~L~~~~Gi~v~~~~~p~~--p~g~~~iRis~~~~~t----~edid~l~~~l~~~ 393 (406)
T PRK13393 323 LPN--PSHIVPVMVGD-PVLCKQISDELLDRYGIYVQPINYPTV--PRGTERLRITPSPLHT----DADIEHLVQALSEI 393 (406)
T ss_pred CCC--CCCeEEEEeCC-HHHHHHHHHHHHHhCCEEEEeECCCCC--CCCCceEEEEECCCCC----HHHHHHHHHHHHHH
Confidence 532 33444444322 1234567666655 6999987654432 2234689999876654 89999999999988
Q ss_pred HHHH
Q 012104 416 VTLT 419 (471)
Q Consensus 416 l~~~ 419 (471)
+...
T Consensus 394 ~~~~ 397 (406)
T PRK13393 394 WARL 397 (406)
T ss_pred HHhc
Confidence 7643
No 129
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=2.3e-21 Score=197.90 Aligned_cols=340 Identities=15% Similarity=0.096 Sum_probs=206.4
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-H
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-S 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t 107 (471)
+..|+|..+++. .++.+++++.+.+.+....+|+.. .| ...+.+...+++.+.+|.+.+. .-+|..++| +
T Consensus 30 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~---~G---~~~lr~aia~~~~~~~g~~~~~-~~~I~it~G~~ 102 (405)
T PRK09148 30 ADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSAS---KG---IPGLRRAQAAYYARRFGVKLNP-DTQVVATLGSK 102 (405)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCC---CC---CHHHHHHHHHHHHHHhCCCCCC-CCcEEEcCChH
Confidence 456788766643 367788887765532211233321 12 2234333445555555653211 013555555 5
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh--CCCcEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD--FRPKLI 185 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~--~~pklI 185 (471)
+|+..++.++++|||+|++.+|+|+++.. .....|. ++++++++.++. +.+++++.+.. .++++|
T Consensus 103 ~al~~~~~~l~~~gd~Vl~~~P~y~~~~~---------~~~~~g~--~v~~v~~~~~~~--~~~~l~~~~~~~~~~~~~v 169 (405)
T PRK09148 103 EGFANMAQAITAPGDVILCPNPSYPIHAF---------GFIMAGG--VIRSVPAEPDEE--FFPALERAVRHSIPKPIAL 169 (405)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcccHH---------HHHhcCC--EEEEEeCCCCCC--CccCHHHHHhhccccceEE
Confidence 79999999999999999999999987642 1123343 555555553321 23444444432 356766
Q ss_pred E-Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcccc-CCCC--CCC-cc--EEEeCCCCc--CCCCCeE
Q 012104 186 I-CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQE-AANP--FEY-CH--IVTTTTHKS--LRGPRAG 252 (471)
Q Consensus 186 i-~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p--~~~-aD--iv~~s~~K~--l~GprgG 252 (471)
+ ++ +||+|..++.+ +|.++|+++|++|++|++|. .+.+.+. .++. ++. .+ +++.|++|+ ++|.|.|
T Consensus 170 ~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G 248 (405)
T PRK09148 170 IVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYS-EIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMG 248 (405)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccch-hhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchhee
Confidence 6 44 78999999875 56678999999999999997 5555432 2222 221 22 678999998 4789999
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
|+++++ ++.+.+.........+.+...+. +.+.++.. ....+++..+++.++.+.+.+.|++.
T Consensus 249 ~~v~~~---------------~~i~~l~~~~~~~~~~~~~~~q~-~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 249 FAVGNE---------------RLIAALTRVKSYLDYGAFTPIQV-AATAALNG-PQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred eeeCCH---------------HHHHHHHHHHHHhccCCChHHHH-HHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999876 45555543321111122222222 22334432 12345667777888889999999988
Q ss_pred CceEeeCCCCCeeEEEEccCC--CCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPL--GLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~--~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
|+.+. .+.++.++|+++++. +++..++. .++++.||.|.++..++.. ..+++||++. ...+.+.+..
T Consensus 312 ~~~~~-~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~---~~~~~Ri~~~------~~~~~l~~al 381 (405)
T PRK09148 312 GWDIP-PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEH---GDGYVRIALV------ENEQRIRQAA 381 (405)
T ss_pred CCccC-CCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEec------CCHHHHHHHH
Confidence 88653 345677889988542 23445664 4567899999988665421 2478999983 1245666666
Q ss_pred HHHHHHHHH
Q 012104 410 EFLHRAVTL 418 (471)
Q Consensus 410 ~~i~~~l~~ 418 (471)
+.|.+.+..
T Consensus 382 ~~l~~~l~~ 390 (405)
T PRK09148 382 RNIKRFLSS 390 (405)
T ss_pred HHHHHHHHH
Confidence 555555543
No 130
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.91 E-value=1.1e-21 Score=200.57 Aligned_cols=344 Identities=15% Similarity=0.101 Sum_probs=201.2
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhcc----CCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecC
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNK----YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPY 104 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~----~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~ 104 (471)
.+.++|..+++. +++.+.+++...+... ...+|+ .......+.+...+++.+..|.+.+. -+|..+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~~~G~~~LR~aia~~~~~~~g~~~~~--~~I~it 105 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG------PEQGYDFLREKIAENDYQARGCDISA--DEIFIS 105 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC------CCCCCHHHHHHHHHHHHHhcCCcCCh--hhEEEC
Confidence 356888877754 4678888887766431 111231 11112234333334444444433221 246666
Q ss_pred ChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccce---------eEEEeeeecCC-CCCCCHHHH
Q 012104 105 SGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY---------FESLPYKVNSS-TGYIDYDKL 173 (471)
Q Consensus 105 sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~---------~~~~~~~v~~~-~~~iD~~~l 173 (471)
+|+ +|+.++ ..++.|||+|++.+|+|.++... +...|.. .++++++++++ ++.+|.+
T Consensus 106 ~Ga~~al~~l-~~~~~~gd~V~v~~P~Y~~~~~~---------~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-- 173 (409)
T PRK07590 106 DGAKCDTGNI-LDIFGPDNTIAVTDPVYPVYVDT---------NVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-- 173 (409)
T ss_pred CCHHHHHHHH-HHhcCCCCEEEEeCCCCcchHHH---------HHHcCCcccccccccccceeEeecccccCCcccCc--
Confidence 776 566664 56679999999999999877531 1222321 12566666643 3444432
Q ss_pred HHHhhhCCCcEEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhccccCCCCC---CC-cc--EEEeCC
Q 012104 174 EEKALDFRPKLII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY-CH--IVTTTT 242 (471)
Q Consensus 174 e~~~~~~~pklIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~-aD--iv~~s~ 242 (471)
+.++|+|+ ++ +||+|..++.++ |.++|+++|++||+|++|. .+.+.+..+.++ +. .+ |+++|+
T Consensus 174 -----~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~-~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 -----EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE-AFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred -----ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch-hhccCCCCCcchhhCCCcccceEEEecC
Confidence 25789887 45 789999998764 5567899999999999997 565544332222 22 12 678999
Q ss_pred CCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 012104 243 HKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (471)
Q Consensus 243 ~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~ 320 (471)
+|++ +|.|.||+++++++......+... .+............ .+++.....+.+.++..-....+++..+.+.+
T Consensus 248 SK~~~~pGlRiG~~i~~~~li~~~~~~~~~---~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~ 323 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPKELKGKTSDGEGV---SLNSLWNRRQSTKF-NGVSYIVQRAAEAVYSPEGKAQIKELIDYYME 323 (409)
T ss_pred ccccCCcCceeEEEEcCHHHhhhccccchh---hhHHHHHHHHhhcc-cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 9984 899999999987421000000000 00001111111111 12222222333334432112345667777888
Q ss_pred HHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 321 NAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 321 na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
+.+.+.+.|++.|+.+. .+..++++|+++++ +++..++. .+++++||.+.++..++.. ..+++||++ ..
T Consensus 324 ~r~~l~~~L~~~~~~~~-~~~g~~f~wi~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~---~~~~iRi~~--~~--- 393 (409)
T PRK07590 324 NAKIIREGLESAGFEVY-GGVNAPYIWVKTPD-GMSSWDFFDKLLQEANVVGTPGSGFGPS---GEGYFRLSA--FG--- 393 (409)
T ss_pred HHHHHHHHHHhcCCcee-cCCcceEEEEECCC-CCCHHHHHHHHHHHCCEEEeChhHhCCC---CCCEEEEEc--cC---
Confidence 88999999998888764 44567788999864 45666665 4556789999888655421 246999985 22
Q ss_pred CCHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRA 415 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~ 415 (471)
.++++++..+.|.++
T Consensus 394 -~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 394 -SRENVLEAMERIKKA 408 (409)
T ss_pred -CHHHHHHHHHHHHhh
Confidence 256777666666543
No 131
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=7.6e-22 Score=205.11 Aligned_cols=341 Identities=13% Similarity=0.073 Sum_probs=207.0
Q ss_pred CCeeEecCCCCCcH-HHHHHHhhhhhc----c-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC----CCCCCCceee
Q 012104 32 RGIELIASENFTSF-AVIEALGSALTN----K-YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNV 101 (471)
Q Consensus 32 ~~i~li~s~n~~s~-~v~~a~~~~l~~----~-~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg----~~~~~~~~~v 101 (471)
..|+|...||.... .+.+.+.+.... . -...++..-.|+.......+.+...+++.+.+| ++++ +|
T Consensus 47 g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe----~I 122 (496)
T PLN02376 47 GIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE----RV 122 (496)
T ss_pred ceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh----hE
Confidence 36999999998733 223333322111 0 001133323333333344555444566766666 4443 34
Q ss_pred ecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccce-eccceeEEEeeeecC-CCCCCCHHHHHHHhh
Q 012104 102 QPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNS-STGYIDYDKLEEKAL 178 (471)
Q Consensus 102 ~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~-~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~ 178 (471)
..++| ++|+..++.++++|||.|++++|.|+++.. .+. ..| .++++++++. +++.+|++.+++.++
T Consensus 123 vit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~---------~~~~~~G--~~vv~v~~~~~~~~~~~~~~le~a~~ 191 (496)
T PLN02376 123 VMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR---------DLRWRTG--VEIIPVPCSSSDNFKLTVDAADWAYK 191 (496)
T ss_pred EEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH---------HHHhhCC--CEEEEEeCCCCccCcCCHHHHHHHHH
Confidence 44555 579999999999999999999999998742 111 233 4566666653 357899999986642
Q ss_pred -----hCCCcEEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhcccc-CCCC--C-CC-------cc-
Q 012104 179 -----DFRPKLII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQE-AANP--F-EY-------CH- 236 (471)
Q Consensus 179 -----~~~pklIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~-~~~p--~-~~-------aD- 236 (471)
..++|+|+ ++ +||+|.+++.++ |.++|+++|++||+|++|. .+++.+. +++. + .. .+
T Consensus 192 ~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~-~~~f~~~~~~si~~l~~~~~~~~~~~~~ 270 (496)
T PLN02376 192 KAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYA-ATVFAGGDFVSVAEVVNDVDISEVNVDL 270 (496)
T ss_pred HHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCcc-ccccCCCCcccHHHhhccccccccCCCe
Confidence 13678665 55 789999998765 5578889999999999997 5555442 2221 1 10 13
Q ss_pred -EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHH-H
Q 012104 237 -IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-K 312 (471)
Q Consensus 237 -iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~-~ 312 (471)
+++.|++|+ ++|.|.|+++++++ .+.+.+......+ ........+++..+. ...| +
T Consensus 271 v~vv~S~SK~~glpGlRvG~li~~~~--------------~l~~~~~~~~~~~---~vs~~~Q~a~~~~L~---d~~~~~ 330 (496)
T PLN02376 271 IHIVYSLSKDMGLPGFRVGIVYSFND--------------SVVSCARKMSSFG---LVSSQTQLMLASMLS---DDQFVD 330 (496)
T ss_pred EEEEEeccccCCCCcceEEEEEECCH--------------HHHHHHHHHhhcC---CCCHHHHHHHHHHhC---ChhHHH
Confidence 457899998 48999999998653 3444333221111 112222223333332 2233 3
Q ss_pred H----HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCC------CHHHH-HHHHhhcCeEeccCCcCCCCC
Q 012104 313 A----YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGL------TGNKV-EKLCDLCNITVNKNAVFGDSS 381 (471)
Q Consensus 313 ~----~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~------~~~~~-~~~L~~~gI~v~~~~~p~~~~ 381 (471)
+ ..+++.++.+.+.+.|.+.|+.++. +.++.++|++++.... +..++ ..+++++||.+.++..++..
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~-~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~- 408 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKADIACLT-SNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT- 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcccC-CCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC-
Confidence 3 3555667777888899888887653 4566889999864211 11334 44556789999998766422
Q ss_pred CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 382 ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 382 ~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.++++||++..+ .++.+++..+.|.+++.
T Consensus 409 --~~g~~Ri~fa~~-----~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 409 --EPGWFRICFANM-----DDDTLHVALGRIQDFVS 437 (496)
T ss_pred --CCCEEEEEeeCC-----CHHHHHHHHHHHHHHHH
Confidence 357999998432 24555555555555554
No 132
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.91 E-value=3.6e-22 Score=200.94 Aligned_cols=316 Identities=17% Similarity=0.104 Sum_probs=205.4
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeec-CChH-
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQP-YSGS- 107 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~-~sGt- 107 (471)
+.|+|..++|. .+|.+++++...+.. + .+|+.. . ...+ ++.+++++|++.+ +|.. ++|+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~~------~-~~~l----r~~ia~~~~~~~~----~i~~~~~Ga~ 97 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPEP------D-APEL----REALSKYTGVPVE----NIIVGGDGMD 97 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC------C-HHHH----HHHHHHHhCCCHH----HEEEeCCCHH
Confidence 56888878775 367888888665532 1 233321 1 1233 3567788898764 3444 6776
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
+++..++.++++|||+|++.+|.|+.+.. .+...| .+++.++.+ .++.+|++++++.+. .++++|++
T Consensus 98 ~~i~~~~~~~~~~gd~vlv~~p~y~~~~~---------~~~~~g--~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~~ 164 (361)
T PRK00950 98 EVIDTLMRTFIDPGDEVIIPTPTFSYYEI---------SAKAHG--AKPVYAKRE-EDFSLDVDSVLNAIT-EKTKVIFL 164 (361)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH---------HHHHcC--CEEEEeecC-CCCCcCHHHHHHHhc-cCCCEEEE
Confidence 57788888889999999999988765421 112234 344455544 456899999999885 36887764
Q ss_pred -c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCcc--EEEeCCCCcC--CCCCeEEEEeeCCCC
Q 012104 188 -G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCH--IVTTTTHKSL--RGPRAGMIFYRKGPK 261 (471)
Q Consensus 188 -~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aD--iv~~s~~K~l--~GprgG~i~~~~~~~ 261 (471)
+ +||+|...+.+++.++|+++|+++++|++|. ++. .+.....+...| +++.|++|++ +|.|.||+++++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--- 239 (361)
T PRK00950 165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--- 239 (361)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH---
Confidence 4 7899999999999999999999999999996 443 111111111223 7789999995 677899999876
Q ss_pred CCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC
Q 012104 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT 341 (471)
Q Consensus 262 ~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~ 341 (471)
++.+.+.....+... .....++...++.. .+.+++..++..++.+.+.+.|. +.+. +.
T Consensus 240 ------------~~~~~~~~~~~~~~~---~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~---~~~~--~~ 297 (361)
T PRK00950 240 ------------WLIDYYMRAKTPFSL---TRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP---FKVY--PS 297 (361)
T ss_pred ------------HHHHHHHHhcCCCCC---CHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC---eeEC--CC
Confidence 455555443322211 12222222223321 12345555555555555655553 5543 34
Q ss_pred CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 342 ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 342 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.+.++|+++. +.+..++.+.|.++||.+.++..++ ...++++||++. +.++++++.++|++++
T Consensus 298 ~~~~i~~~~~--~~~~~~~~~~l~~~gv~v~~~~~f~---~~~~~~lRis~~-------~~~~~~~l~~~L~~il 360 (361)
T PRK00950 298 EANFVLVDVT--PMTAKEFCEELLKRGVIVRDCTSFR---GLGDYYIRVSIG-------TFEENERFLEILKEIV 360 (361)
T ss_pred cceEEEEECC--CCCHHHHHHHHHHCCEEEeeCCccC---CCCCCeEEEECC-------CHHHHHHHHHHHHHHh
Confidence 4567888883 4678888888888999998765332 123478999973 3679999999998865
No 133
>PRK09265 aminotransferase AlaT; Validated
Probab=99.91 E-value=2.8e-21 Score=197.33 Aligned_cols=339 Identities=14% Similarity=0.092 Sum_probs=204.3
Q ss_pred cCCeeEecCC-C---C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhc--CCCCCCCceeeec
Q 012104 31 CRGIELIASE-N---F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTF--HLDPTQWGVNVQP 103 (471)
Q Consensus 31 ~~~i~li~s~-n---~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lf--g~~~~~~~~~v~~ 103 (471)
++.++|..++ + + .++.+.+++.+.+... .+|+... | ...+.+...+++.... +++.+ +|..
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~--~~Y~~~~---G---~~~lr~~ia~~~~~~~~~~~~~~----~i~~ 100 (404)
T PRK09265 33 HKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA--QGYSDSK---G---LFSARKAIMQYYQQKGIPDVDVD----DIYI 100 (404)
T ss_pred CCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcC--CCCCCCC---C---cHHHHHHHHHHHhccCCCCCCcc----cEEE
Confidence 4668887643 2 2 4678888876654322 2343321 2 1233222222222111 45543 4555
Q ss_pred CChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCC
Q 012104 104 YSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFR 181 (471)
Q Consensus 104 ~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~ 181 (471)
++|+ +++..++.++++|||+|++.+|+|+.+.. .+...| .+.+.++++. .++.+|++++++.+. .+
T Consensus 101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~---------~~~~~g--~~~v~~~~~~~~~~~~d~~~l~~~~~-~~ 168 (404)
T PRK09265 101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA---------AVSLSG--GKPVHYLCDEEAGWFPDLDDIRSKIT-PR 168 (404)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH---------HHHHcC--CEEEEEecccccCCCCCHHHHHHhcc-cc
Confidence 5665 67889999999999999999999986542 112233 3444454443 356799999999886 46
Q ss_pred CcEEE-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----Ccc-EEEeCCCCcC--CCC
Q 012104 182 PKLII-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKSL--RGP 249 (471)
Q Consensus 182 pklIi-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aD-iv~~s~~K~l--~Gp 249 (471)
+++|+ ++ +||+|..++ +++|.++|+++|++|++|++|. ++.+.+....++. ... +++.|++|++ +|.
T Consensus 169 ~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 247 (404)
T PRK09265 169 TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYD-KILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGF 247 (404)
T ss_pred ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhh-hccCCCCCcCCHHHcCCCceEEEEecchhhccCccc
Confidence 88765 55 789999999 7788889999999999999997 6665443222221 122 6689999994 789
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHH---HHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY---AKQVKANAVALG 326 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~---~~~~~~na~~l~ 326 (471)
|.||+++..+..- .. .+.+.+..... ...+.+.. ...+...++... ..++++ .+++.++++.+.
T Consensus 248 RiG~~v~~~~~~~-------~~--~~~~~~~~~~~-~~~~~~~~-~q~~~~~~l~~~--~~~~~~~~~~~~~~~~r~~~~ 314 (404)
T PRK09265 248 RVGWMVLSGPKKH-------AK--GYIEGLDMLAS-MRLCANVP-AQHAIQTALGGY--QSINELILPGGRLYEQRDRAW 314 (404)
T ss_pred ceEEEEEeCchHH-------HH--HHHHHHHHHhc-cccCCCcH-HHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHH
Confidence 9999997432000 00 12222221111 11122222 223333344321 122222 245667788888
Q ss_pred HHHHcC-CceEeeCCCCCeeEEEEccCCC---C-CHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 327 NYLTGK-GYSLVTGGTENHLVLWDLRPLG---L-TGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 327 ~~L~~~-g~~i~~~~~~~~~~~v~~~~~~---~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
+.|++. |+.+. .+.++.++|+++.... . +.+.+.+.|.++||.+.++..++.. .++++||++. + .
T Consensus 315 ~~L~~~~~~~~~-~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~---~~~~~Ri~~~--~----~ 384 (404)
T PRK09265 315 ELLNAIPGVSCV-KPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWP---EPDHFRIVTL--P----R 384 (404)
T ss_pred HHHhcCCCCccc-CCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCC---CCCeEEEEeC--C----C
Confidence 888876 77664 4456778898875421 1 3345788899999999887665321 2478999982 2 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVT 417 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~ 417 (471)
++++++..+.|.++++
T Consensus 385 ~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 385 VDDLEEAIGRIGRFLS 400 (404)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777777777766654
No 134
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=3.8e-22 Score=198.77 Aligned_cols=318 Identities=19% Similarity=0.143 Sum_probs=193.9
Q ss_pred cCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHH
Q 012104 38 ASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (471)
Q Consensus 38 ~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~ 115 (471)
.|+|+ .+|.+++++....... . +| +......+++ +++++++| +. ..+.+++|++|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~-~------~~-~~~~~~~~l~----~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD-D------VY-GEDPTTAKLE----ARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC-c------cc-CCCHHHHHHH----HHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 46665 4789999987644211 0 22 2233344444 67888999 33 25667889999999999
Q ss_pred HhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh------CCCcEEEE-c
Q 012104 116 AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD------FRPKLIIC-G 188 (471)
Q Consensus 116 all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~------~~pklIi~-~ 188 (471)
++++|||+|++.++.|.++..... .....|. +++.++.+ ++.+|++++++++.+ .++++|++ +
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~~------~~~~~g~--~~~~v~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~ 135 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAGA------PEFLSGV--KLLPVPGE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLEN 135 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCCc------HHHHcCc--eEEeecCC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEe
Confidence 999999999999988765432110 0112343 44444433 367999999999864 26787764 4
Q ss_pred CCCCCcc---ccHHHHHHHHHHhCCEEEEeccccchhh-ccccCCCCC-CCccEEEeCCCCcCCCCCeEEEEeeCCCCCC
Q 012104 189 GSAYPRD---WDYARFRAVADKCGALLLCDMAHISGLV-AAQEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPP 263 (471)
Q Consensus 189 ~s~~g~~---~d~~~i~~ia~~~g~~livD~a~~~glv-~~g~~~~p~-~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~ 263 (471)
.++.|.. .++++|.++|+++|+++++|++|..+.. ..|.....+ .++|+++.|+||++.+|.|++++.++
T Consensus 136 p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~----- 210 (338)
T cd06502 136 TTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR----- 210 (338)
T ss_pred ecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH-----
Confidence 4444644 3556788999999999999999864432 122211112 26789999999998777666555555
Q ss_pred CCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCC
Q 012104 264 KKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTEN 343 (471)
Q Consensus 264 ~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~ 343 (471)
++.+++.....+. .++......++. +++..+....+.++.+++.++++++.+.|++.|+.+. +...
T Consensus 211 ----------~~~~~~~~~~~~~-~~~~~~~~~~~~-a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~ 276 (338)
T cd06502 211 ----------DFIARARRRRKQA-GGGMRQSGFLAA-AGLAALENDLWLRRLRHDHEMARRLAEALEELGGLES--EVQT 276 (338)
T ss_pred ----------HHHHHHHHHHHHh-CCChhhHHHHHH-HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCcc--cccC
Confidence 4555444321111 111122222111 1222222234566778888999999999998887543 2345
Q ss_pred eeEEEEccCCCCCHHHHHHHHh---hcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCD---LCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~---~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
+++++.+.........+.+.+. +.||.+.+. ..+.+|++.+..++ ++|++++.+.+.+
T Consensus 277 ~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~---------~~~~lRi~~~~~~~----~~~i~~~~~~l~~ 337 (338)
T cd06502 277 NIVLLDPVEANAVFVELSKEAIERRGEGVLFYAW---------GEGGVRFVTHWDTT----EEDVDELLSALKA 337 (338)
T ss_pred CeEEEecCCccHHHHHHHHHHHHhhhCCEEEEec---------CCCeEEEEeecCCC----HHHHHHHHHHHhc
Confidence 5666655321111112222222 578888652 12689999865544 7899999988754
No 135
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=6.8e-22 Score=199.57 Aligned_cols=319 Identities=17% Similarity=0.122 Sum_probs=212.2
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.|+|..++|. .++.+.+++...... . ..|+.. .. ..+ ++.+++++|++.+ +|..++|+
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~-~-~~Y~~~------~g-~~l----r~~ia~~~~~~~~----~i~~t~G~~ 98 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAEL-L-RLYPDP------QG-RAL----REAIAARTGVPAD----RIILGNGSE 98 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHH-h-hcCCCC------cH-HHH----HHHHHHHhCcCHH----HEEEcCCHH
Confidence 356888777764 578888888654322 1 133321 11 123 3556778888753 45556665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
+++..++.++++|||+|++..|+|+++.. .+...| .+++.++++ +++.+|++++++.+.. ++|+|++
T Consensus 99 ~~l~~~~~~~~~~gd~vli~~P~y~~~~~---------~~~~~g--~~~~~v~~~-~~~~~~~~~l~~~~~~-~~~~v~l 165 (371)
T PRK05166 99 DLIAVICRAVLRPGDRVVTLYPSFPLHED---------YPTMMG--ARVERVTVT-PDLGFDLDALCAAVAR-APRMLMF 165 (371)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCChHHHHH---------HHHHcC--CeEEEeecC-CCCCCCHHHHHHhhhc-CCCEEEE
Confidence 68888889999999999999999876531 122334 345555555 3478999999998864 7888764
Q ss_pred -c-CCCCCccccHHHHHHHHHH--hCCEEEEeccccchhhccccCCCCCC----Cc--cEEEeCCCCc--CCCCCeEEEE
Q 012104 188 -G-GSAYPRDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE----YC--HIVTTTTHKS--LRGPRAGMIF 255 (471)
Q Consensus 188 -~-~s~~g~~~d~~~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~----~a--Div~~s~~K~--l~GprgG~i~ 255 (471)
+ +||+|..++.+++.++++. .+++|++|++|. .+...+..++.+. .. -|++.|++|+ ++|.|.||++
T Consensus 166 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i 244 (371)
T PRK05166 166 SNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYA-EYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGL 244 (371)
T ss_pred eCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHH-HhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeee
Confidence 4 7899999999888887765 378999999986 5554333333321 11 2789999999 5899999987
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCce
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYS 335 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~ 335 (471)
+.++ ++.+.+.....+. + ++.....+...++.. .+.+++..+.+.++.+.+.+.|++.|+.
T Consensus 245 ~~~~--------------~l~~~~~~~~~~~--~-~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~ 305 (371)
T PRK05166 245 VSDP--------------ELVGLLDRVRTPF--N-VNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEMGYR 305 (371)
T ss_pred cCCH--------------HHHHHHHHhccCC--C-CCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCcCe
Confidence 7543 4555554432221 2 222222222233432 2345667777888888999999988887
Q ss_pred EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 336 LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+. + .++.++|+++.. +..++.+.|.++||.+.++..++ ..+++||++. ..++++++.+.|+++
T Consensus 306 ~~-p-~~g~fl~~~~~~---~~~~l~~~l~~~gi~v~p~~~~~-----~~~~iRi~~~-------~~~~~~~l~~~l~~i 368 (371)
T PRK05166 306 IA-P-SRANFLFFDARR---PASAVAEALLRQGVIVKPWKQPG-----FETFIRVSIG-------SPEENDHFVAALDKV 368 (371)
T ss_pred eC-C-CcCCEEEEeCCC---CHHHHHHHHHHCCeEEecCCCCC-----CCCeEEEEcC-------CHHHHHHHHHHHHHH
Confidence 63 3 334567888642 56778888888899998764322 2579999983 267899999988775
Q ss_pred H
Q 012104 416 V 416 (471)
Q Consensus 416 l 416 (471)
+
T Consensus 369 ~ 369 (371)
T PRK05166 369 L 369 (371)
T ss_pred h
Confidence 4
No 136
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.6e-21 Score=195.37 Aligned_cols=336 Identities=16% Similarity=0.132 Sum_probs=206.7
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhc--CCCCCCCceeeecCChH
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTF--HLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lf--g~~~~~~~~~v~~~sGt 107 (471)
+.+.|..+++. +++.+.+++...... ..+|+. ......+.+...+++. .. +++.+. .+.+.+++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~Y~~------~~g~~~lr~~ia~~~~-~~~~~~~~~~---i~~t~G~~ 98 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEE--VLAYSH------SQGIPELREAFAKYYK-KWGIDVEPDE---ILITNGGS 98 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcC--CcCcCC------CCCCHHHHHHHHHHHH-HhCCCCCcce---EEEcCChH
Confidence 45777666643 467888887654321 112322 1112233322223332 12 344431 23455566
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC-C-CCHHHHHHHhhhCCCcEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG-Y-IDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~-~-iD~~~le~~~~~~~pklI 185 (471)
+|+..++.++++|||+|++.+|.|+.+.. .....|. +++.++++.+++ . .|++++++.+.. ++++|
T Consensus 99 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~~~v~~~~~~g~~~~~~~~l~~~~~~-~~~~v 166 (397)
T PRK07568 99 EAILFAMMAICDPGDEILVPEPFYANYNG---------FATSAGV--KIVPVTTKIEEGFHLPSKEEIEKLITP-KTKAI 166 (397)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCccHHH---------HHHHcCC--EEEEeecCcccCCCCCCHHHHHHhcCc-cceEE
Confidence 89999999999999999999988875532 1122343 445555543333 3 368999998863 67877
Q ss_pred E-Ec-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhcccc-CCCCCC--C-cc--EEEeCCCCcC--CCCCeE
Q 012104 186 I-CG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE--Y-CH--IVTTTTHKSL--RGPRAG 252 (471)
Q Consensus 186 i-~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~~--~-aD--iv~~s~~K~l--~GprgG 252 (471)
+ ++ +||+|..++ +++|.++|+++|+++++|++|. ++.+.+. .++... . .+ +++.|+||++ +|.|.|
T Consensus 167 ~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G 245 (397)
T PRK07568 167 LISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYR-EFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIG 245 (397)
T ss_pred EEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccch-hcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceE
Confidence 6 44 678998885 6778889999999999999997 6665543 222222 1 23 7899999995 688999
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+++++++ ++.+.+....... .+.+...+ .+++.+++. ....+++..+.+.++++.+.+.|++.
T Consensus 246 ~~~~~~~--------------~~~~~~~~~~~~~-~~~s~~~q-~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (397)
T PRK07568 246 CLISKNK--------------ELIAAAMKLCQAR-LSPPTLEQ-IGAAALLDT-PESYFDEVREEYKKRRDILYEELNKI 308 (397)
T ss_pred EEecCCH--------------HHHHHHHHHhhcc-CCCCcHHH-HHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9998642 3444333221111 22333333 333344543 22345667777888889999999876
Q ss_pred -CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhh------cCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHH
Q 012104 333 -GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDL------CNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 333 -g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~------~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
|+.+. .+.+++++|+++.. .+..++.+.|.+ .||.+.++..++..+....+++||++. ..++++
T Consensus 309 ~~~~~~-~p~g~~~~~~~l~~--~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~------~~~~~~ 379 (397)
T PRK07568 309 PGVVCE-KPKGAFYIIAKLPV--DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV------LNEEDL 379 (397)
T ss_pred CCceec-CCCcceEEEEecCC--CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe------CCHHHH
Confidence 66653 34566778888853 256667555533 699998876554322223479999973 235778
Q ss_pred HHHHHHHHHHHHH
Q 012104 406 EQIGEFLHRAVTL 418 (471)
Q Consensus 406 ~~l~~~i~~~l~~ 418 (471)
++..+.|.++++.
T Consensus 380 ~~~~~~l~~~l~~ 392 (397)
T PRK07568 380 KRAMEILKEALEK 392 (397)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777776653
No 137
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.91 E-value=2.2e-21 Score=201.35 Aligned_cols=340 Identities=13% Similarity=0.127 Sum_probs=212.5
Q ss_pred CCCCcHHHHHHHhhh--hhccCCCCC-CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH--
Q 012104 40 ENFTSFAVIEALGSA--LTNKYSEGM-PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY-- 114 (471)
Q Consensus 40 ~n~~s~~v~~a~~~~--l~~~~~~g~-~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~-- 114 (471)
.+..+|.+.+++.+. +. .|. .| |.... +..-++....++++++++|++. +.+.+++|+.+....+
T Consensus 79 ~~~~~p~i~~~~~~~~~~~-~~t-pYq~e~~s----qG~lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 79 TMKYNPKINEKVARLPGFA-ELH-PLQPEETV----QGALELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLM 148 (481)
T ss_pred CCCCCHHHHHHHHhCcchh-cCC-CCCChhhh----hHHHHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHH
Confidence 355688888888764 22 221 12 11111 1122333446688999999974 5777778876554432
Q ss_pred -H-HhcCCCC----EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-E
Q 012104 115 -T-AVLEPHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-C 187 (471)
Q Consensus 115 -~-all~pGD----~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~ 187 (471)
. .++++|| +|+++++.|+.+.. .+...| .+++.++++ +++.+|+++|++++.. ++++|+ +
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~---------~~~~~G--~~vv~v~~~-~~~~~D~e~L~~~i~~-~t~~V~v~ 215 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPA---------SAAMAG--FKVVEIPSN-EDGLVDLEALKAAVGE-DTAALMLT 215 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHH---------HHHHcC--CEEEEeecC-CCCCcCHHHHHhhccc-CCeEEEEe
Confidence 2 3467887 99999988876642 122344 455555555 4588999999998864 677665 4
Q ss_pred cCCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCCCC------eEEEEeeCC
Q 012104 188 GGSAYPRD-WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR------AGMIFYRKG 259 (471)
Q Consensus 188 ~~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gpr------gG~i~~~~~ 259 (471)
++|++|.. .|+++|.++|+++|+++++|++|..++. |.. .|-. ++|++++++||+|.+|. +|++.++++
T Consensus 216 ~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~--g~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 216 NPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL--GKA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred CCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhc--ccC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 56788876 4899999999999999999999975533 222 2333 79999999999987554 467777765
Q ss_pred CCCCCC------CCCCCcccch--HhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 260 PKPPKK------GQPEGAVYDF--EDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 260 ~~~~~~------~~~~i~~~~l--~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
+....+ .+.... +.+ .+.+.+ +... +.....+.+....+..+..+++++..++...++++|++.|.+
T Consensus 293 ~~~~lp~~~v~~~g~~~~-l~~~r~~~i~r--~~a~--t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 293 LAPFLPVPVVEKDGDRYR-LDYDRPKSIGR--VRAF--YGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred hHhhCCCCeeeccCCcee-ecccccccCCC--cccc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 321111 111000 000 000111 1111 111122222223344444557778888899999999999998
Q ss_pred CCceEeeCCCCCeeEEEEc---cCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 332 KGYSLVTGGTENHLVLWDL---RPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 332 ~g~~i~~~~~~~~~~~v~~---~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
. +.+...+...+.+++++ ...+++..++.+.|.+.||.+.....|. ...+.+|+++...++ ++|++++
T Consensus 368 ~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~----~~~~~l~is~~e~~t----~edid~l 438 (481)
T PRK04366 368 I-YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPL----IVPEALMIEPTETES----KETLDAF 438 (481)
T ss_pred h-CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCcccccc----ccCCeEEEcccCCCC----HHHHHHH
Confidence 6 55433222224455554 2235677889999999999876433222 124689999876654 7999999
Q ss_pred HHHHHHHHHHH
Q 012104 409 GEFLHRAVTLT 419 (471)
Q Consensus 409 ~~~i~~~l~~~ 419 (471)
++.+.++.+..
T Consensus 439 ~~~l~~i~~~~ 449 (481)
T PRK04366 439 IAAMKQIAEEA 449 (481)
T ss_pred HHHHHHHHHHH
Confidence 99998886544
No 138
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.91 E-value=4.7e-22 Score=194.12 Aligned_cols=347 Identities=18% Similarity=0.190 Sum_probs=216.4
Q ss_pred CCeeEec-CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 32 RGIELIA-SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 32 ~~i~li~-s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
+.+.|-. +...++++|++||...+.+.| |+|++++| |.+.-+.+| .+|+.+++++|+++.+ .+++.++|++|
T Consensus 43 ~~vyld~~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E-~aR~~VAklInAd~~d---IiFts~ATEs~ 115 (428)
T KOG1549|consen 43 RPVYLDNQATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVE-AAREQVAKLINADPSD---IVFTSGATESN 115 (428)
T ss_pred ccEEEecCcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHH-HHHHHHHHHhCCCCCc---EEEeCCchHHH
Confidence 4455543 446679999999998887766 78998833 556666787 4789999999999863 35566667899
Q ss_pred HHHHHHh-cCCCC----EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE
Q 012104 111 FAAYTAV-LEPHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 111 ~~~~~al-l~pGD----~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI 185 (471)
.+++..+ +.++| .|+++.-+|+++.- +. ......++++..++++ +++.+|.+.+++.++. +|++|
T Consensus 116 Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~-s~-------~~l~~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv 185 (428)
T KOG1549|consen 116 NLVLKGVARFFGDKTKKHIITLQTEHPCVLD-SC-------RALQEEGLEVTYLPVE-DSGLVDISKLREAIRS-KTRLV 185 (428)
T ss_pred HHHHHHhhccccccccceEEEecccCcchhH-HH-------HHHHhcCeEEEEeccC-ccccccHHHHHHhcCC-CceEE
Confidence 9999887 66888 99999988877652 11 1122233777788887 7799999999999975 89999
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCC-eEEEEeeCCC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPR-AGMIFYRKGP 260 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gpr-gG~i~~~~~~ 260 (471)
.+. .|..|..+|+++|.++|++.|+++++|+||+.|.+ +..+. ++|++++|.|||+ ||+ .|++.+++..
T Consensus 186 ~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i-----~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~~~ 259 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKI-----PVDVQELNADFLSISAHKIY-GPPGIGALYVRRKR 259 (428)
T ss_pred EEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCc-----cccHHHcCchheeeeccccc-CCCcceEEEEccCC
Confidence 866 66789999999999999999999999999997753 33443 7999999999986 676 4888887621
Q ss_pred ---C--CCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc-C-C
Q 012104 261 ---K--PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG-K-G 333 (471)
Q Consensus 261 ---~--~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~-~-g 333 (471)
+ +...+|..+. .+ -.|+.....+.++..|.+.... .+......+..+...+...+.. . .
T Consensus 260 ~~~~~~p~~~GGgq~r--~~-----------rsGT~~~~~~~~~gsA~e~~~~-~~~~~~~~~~~~~~~ll~~i~~~~~~ 325 (428)
T KOG1549|consen 260 PRLRVEPPLSGGGQER--GL-----------RSGTVATPLAVGLGSAAEFVNK-EMAYDEAIIKRLSEKLLMGIGQSLPE 325 (428)
T ss_pred CcccccCcccCCcccc--cc-----------ccCCcCchhhhhhHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhhhCch
Confidence 1 1111222111 10 1234444555556555554432 2211222222344444444432 1 2
Q ss_pred ceEeeCCCCCe--eEEEEcc-CCCCCH-HHHHHHHhhcCeEeccCC-cC-------CCCCCCCCCeeEEecCCCCCcCCC
Q 012104 334 YSLVTGGTENH--LVLWDLR-PLGLTG-NKVEKLCDLCNITVNKNA-VF-------GDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 334 ~~i~~~~~~~~--~~~v~~~-~~~~~~-~~~~~~L~~~gI~v~~~~-~p-------~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
..+...+.... .+-+.+. ..|... .+....-..-|..+..+. .| |.......++||||+..+|+
T Consensus 326 ~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t---- 401 (428)
T KOG1549|consen 326 VTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTT---- 401 (428)
T ss_pred hhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCc----
Confidence 22211111111 1222222 112111 111111112233332222 11 11122346899999987775
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~ 419 (471)
++|++++++.|.+.++..
T Consensus 402 ~~di~~~~~~i~~~v~~~ 419 (428)
T KOG1549|consen 402 EEDIDYLVDAIKKLVSLL 419 (428)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 899999999998877653
No 139
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.90 E-value=3.4e-22 Score=200.00 Aligned_cols=341 Identities=13% Similarity=0.089 Sum_probs=225.4
Q ss_pred CeeEecCCCCCcHHHHHHHhhhhhccCCCC--C--CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 33 GIELIASENFTSFAVIEALGSALTNKYSEG--M--PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 33 ~i~li~s~n~~s~~v~~a~~~~l~~~~~~g--~--~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
.+.++|++..+|++|++|+...+.+....| . .+.| ..++.+.+++ ++++++++||++.++ .+.+.+.||+.
T Consensus 4 ~~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr---~~~f~~~~~~-~~~~l~~l~~~~~~~-~v~~~~gsgt~ 78 (360)
T PRK05355 4 VYNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHR---SKEFEAVAEE-AEADLRELLNIPDNY-KVLFLQGGASL 78 (360)
T ss_pred eeeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCC---CHHHHHHHHH-HHHHHHHHhCCCCCc-EEEEEcCCchH
Confidence 457899999999999999988764332111 1 2222 3456666664 678999999984322 26666788899
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHH-HhhhCCCcEEEE
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEE-KALDFRPKLIIC 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~-~~~~~~pklIi~ 187 (471)
|+.+++..++.+||++++......|| .+. ..+...|.. ..+..++..+..+..++++ .+.+ ++++|.+
T Consensus 79 ~~Ea~~~nl~~~g~~~l~i~~G~fg~---r~~----~~a~~~g~~---~~~~~~~~~g~~~~~~~~~~~l~~-~~~~V~~ 147 (360)
T PRK05355 79 QFAMVPMNLLGGGKKADYVDTGSWSK---KAI----KEAKKYGEV---NVAASSEDDGFTYIPPLDEWQLSD-DAAYVHY 147 (360)
T ss_pred HHHHHHHhcCCCCCeEEEEECCHHHH---HHH----HHHHHhCCc---eEEecccccCCCCCCChhhccCCC-CCCEEEE
Confidence 99999999999999999987544444 221 112223421 2222232234555555555 5543 6898875
Q ss_pred c--CCCCCccc-cHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCC-
Q 012104 188 G--GSAYPRDW-DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP- 262 (471)
Q Consensus 188 ~--~s~~g~~~-d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~- 262 (471)
. .+++|... |++++ +|+++++|+++++|. .|.+++..|++++|.||++ ||.| |+++.+++..+
T Consensus 148 th~eTstGv~~~~i~~i------~g~l~vVDavss~g~-----~~idv~~~d~~~~ssqK~l-gP~Glg~l~~s~~~l~~ 215 (360)
T PRK05355 148 TSNETIDGTEFHELPDT------GDVPLVADMSSDILS-----RPIDVSKFGLIYAGAQKNI-GPAGLTIVIVREDLLGR 215 (360)
T ss_pred ccCCCcceEecCccccc------CCCcEEEEcCccccC-----ccCCHHHccEEEEeccccc-cCCceEEEEECHHHHhh
Confidence 5 56788887 55554 899999999998763 3444445689999999987 6987 88887775321
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCCce-EeeC-
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGYS-LVTG- 339 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g~~-i~~~- 339 (471)
..+.-... +++........ ..++|+.+.+.++..+++.+... +++...++..++++++++.|++.|+- .+..
T Consensus 216 ~~~~~~~~--~~~~~~~~~~~---~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~ 290 (360)
T PRK05355 216 ALPSIPSM--LDYKTHADNDS---MYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAP 290 (360)
T ss_pred cccCCChH--HHHHHHHhcCC---ccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCh
Confidence 11100111 12222222222 23789999999999999999877 79999999999999999999998752 2211
Q ss_pred CCCC-eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 340 GTEN-HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 340 ~~~~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
...+ ..+.+.+.. ++...++...+.+.||.+..+. . ..+.+|+|+...++ .+|++++.++|++++.+
T Consensus 291 ~~rs~~v~sf~~~~-~~~~~~~~~~~~~~Gi~~~~~~----~---~~g~vRiS~~~~nt----~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 291 EDRSRMNVPFTLAD-EELDKKFLAEAKAAGLVGLKGH----R---SVGGMRASIYNAMP----LEGVQALVDFMKEFERR 358 (360)
T ss_pred hhcCCcEEEEEcCC-hHHHHHHHHHHHHCCCcccCCC----C---ccCcEEEECCCCCC----HHHHHHHHHHHHHHHHh
Confidence 1112 223344332 2333556667788999984332 1 23689999866654 89999999999997764
No 140
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.4e-21 Score=192.17 Aligned_cols=314 Identities=21% Similarity=0.235 Sum_probs=221.4
Q ss_pred CCeeEecCCCCC--cHHHHHHHhhhhh--ccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-CCCCCCceeeecCCh
Q 012104 32 RGIELIASENFT--SFAVIEALGSALT--NKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n~~--s~~v~~a~~~~l~--~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~sG 106 (471)
..+.|.++||.. ||.+++++...+. ++| |.. . ..++ ++.+++.+| .+. .+|..+.|
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~~~~~~rY----Pd~------~-~~~l----~~a~a~~~~~~~~----~~V~~gnG 83 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAALDKLNRY----PDP------D-YREL----RAALAEYYGVVDP----ENVLVGNG 83 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHHHHhhccC----CCC------c-HHHH----HHHHHHHhCCCCc----ceEEEcCC
Confidence 468899999986 5788888766553 333 332 1 1233 356777888 554 35766777
Q ss_pred H-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE
Q 012104 107 S-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 107 t-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI 185 (471)
+ +.+..++.+++.|||+|++..|+|+.|-. .+...|. +++.++.+ + +.+|++.+.+.+.+ ++++|
T Consensus 84 sde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~---------~a~~~g~--~~~~v~~~-~-~~~d~~~~~~~~~~-~~~lv 149 (356)
T COG0079 84 SDELIELLVRAFVEPGDTVLIPEPTFSMYEI---------AAQLAGA--EVVKVPLK-E-FRLDLDAILAAIRD-KTKLV 149 (356)
T ss_pred hHHHHHHHHHHhhcCCCEEEEcCCChHHHHH---------HHHhcCC--eEEEeccc-c-cccCHHHHHHhhhc-CCCEE
Confidence 7 58889999999999999999999886531 1223343 44444444 3 88999999998876 78988
Q ss_pred E-Ec-CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCC---CCcc--EEEeCCCCc--CCCCCeEEE
Q 012104 186 I-CG-GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPF---EYCH--IVTTTTHKS--LRGPRAGMI 254 (471)
Q Consensus 186 i-~~-~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~---~~aD--iv~~s~~K~--l~GprgG~i 254 (471)
+ |+ +||+|..++.++|.++++.. +.+|++|+||. .+.. ++.+ .+.+ +++-|++|. |+|.|.|++
T Consensus 150 ~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~-eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ 224 (356)
T COG0079 150 FLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYI-EFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYA 224 (356)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeec
Confidence 7 66 78999999999999888865 78999999997 5432 2222 2233 889999998 899999998
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
+.+. ++.+.+++..-|+..++ ...++..+++... +..++..+++.+.+.+|.+.|++.|+
T Consensus 225 ia~~---------------~~i~~l~~vr~p~~v~~---~a~~aa~aal~~~--~~~~~~~~~~~~~r~rl~~~l~~~~~ 284 (356)
T COG0079 225 IANP---------------ELIAALNKVRPPFNVSS---PALAAAIAALRDA--DYLEESVERIREERERLYAALKALGL 284 (356)
T ss_pred cCCH---------------HHHHHHHHhcCCCCCCH---HHHHHHHHHcccH--HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8887 67777887665653322 1222222233321 35577888888899999999999884
Q ss_pred e-EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 335 S-LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 335 ~-i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
. ++ ++..+++++++.. +- ...+.+.|.++||.++...- .+..++++||++. ++++.+++.++|.
T Consensus 285 ~~v~--pS~aNFvlv~~~~-~~-~~~l~~~L~~~giivR~~~~----~~~~~~~lRitvg-------t~een~~ll~AL~ 349 (356)
T COG0079 285 FGVF--PSQANFVLVRVPD-AE-AAALAEALLKKGILVRDCSS----VGLLPGYLRITVG-------TPEENDRLLAALR 349 (356)
T ss_pred Ceec--CCCCcEEEEECCC-cc-HHHHHHHHHHCCEEEEeCCC----CCCCCCeEEEEeC-------CHHHHHHHHHHHH
Confidence 4 54 2446678888764 32 45788999999999987521 1234579999872 2678899999998
Q ss_pred HHHHH
Q 012104 414 RAVTL 418 (471)
Q Consensus 414 ~~l~~ 418 (471)
+++..
T Consensus 350 ~~~~~ 354 (356)
T COG0079 350 EVLKG 354 (356)
T ss_pred HHHhc
Confidence 87753
No 141
>PRK02769 histidine decarboxylase; Provisional
Probab=99.90 E-value=7.7e-21 Score=190.79 Aligned_cols=322 Identities=15% Similarity=0.121 Sum_probs=210.8
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCC-CceeeecCChHHHHHHHHHHh--cCCC
Q 012104 45 FAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQ-WGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 45 ~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~-~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.+.++.+...+.+.+ |.|......|. ....+|+.++++++++||++..+ || +.+++||++|..++.+. +.|+
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~-~~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYPL-NSFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCCC-ChHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence 344555555554544 45544322222 23567888899999999997543 43 44677789988776544 4688
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc--CCCCCcccc
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG--GSAYPRDWD 197 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~--~s~~g~~~d 197 (471)
++|++++.+|.+.. +.....|.... .++++ +++.+|+++|++++.+. +|.+|+++ .+.+|.+.|
T Consensus 111 ~~ii~s~~~H~Sv~---------ka~~~lg~~~~--~V~~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp 178 (380)
T PRK02769 111 GTLYYSKDTHYSVS---------KIARLLRIKSR--VITSL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN 178 (380)
T ss_pred cEEEeCCCceehHH---------HHHHHcCCCCc--eeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC
Confidence 99999987765542 12233344333 33445 46889999999999764 47777644 778999999
Q ss_pred HHHHHHHHHHhC---CEEEEeccccchhhccccCCCCCC---CccEEEeCCCCcCCCCCe-EEEEeeCCCCC-CCCCCCC
Q 012104 198 YARFRAVADKCG---ALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKSLRGPRA-GMIFYRKGPKP-PKKGQPE 269 (471)
Q Consensus 198 ~~~i~~ia~~~g---~~livD~a~~~glv~~g~~~~p~~---~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~-~~~~~~~ 269 (471)
+++|+++|+++| +++++|++|+.+.+..-....+++ ++|.++.|+||++.+|.| |+++++++... ....
T Consensus 179 i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~--- 255 (380)
T PRK02769 179 IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD--- 255 (380)
T ss_pred HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC---
Confidence 999999999998 699999999855432111111232 699999999999878986 88888874211 1000
Q ss_pred CcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEE
Q 012104 270 GAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWD 349 (471)
Q Consensus 270 i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~ 349 (471)
. ++ +.. ..+...|+.+...++++..+++.+...++++..++..++++++.+.|++.|++++..+. ...+.
T Consensus 256 ~---~y---l~~-~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~-~~~v~-- 325 (380)
T PRK02769 256 V---DY---IGS-RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPN-SITVV-- 325 (380)
T ss_pred c---cc---cCC-CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCC-ceEEE--
Confidence 0 01 111 11234677777778888889998888899999999999999999999999999875432 33333
Q ss_pred ccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 350 LRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 350 ~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
|+.. + +++ . .|..++.. +..+||-+.. ..+.+.++++.+-+...+..
T Consensus 326 f~~~--~-~~~---~--~~w~l~~~----------~~~~hi~~~~----~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 326 FPCP--S-ERI---W--KKWHLATS----------GNQAHIITMP----HHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred EcCC--C-HHH---H--hCeeEccc----------CCEEEEEECC----CCCHHHHHHHHHHHHHHHhc
Confidence 3322 2 122 1 34444321 2478886532 23466777777766665553
No 142
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.90 E-value=1.2e-21 Score=197.20 Aligned_cols=318 Identities=16% Similarity=0.074 Sum_probs=207.3
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCC
Q 012104 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEP 120 (471)
Q Consensus 42 ~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~p 120 (471)
..+++.++++...+...+..| ......++| +++++++|.++ .+.+.||++|+.+++.++ ++|
T Consensus 8 ~~~~~e~~a~~~~~~~~~~~~--------~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~p 70 (376)
T TIGR02379 8 PVTGQELEYIAEAISEGKLSG--------DGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQP 70 (376)
T ss_pred CCCHHHHHHHHHHHHcCCccC--------CcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 345666777777665443211 123445555 56778889875 356788999999999988 899
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHH
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYAR 200 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~ 200 (471)
||+|++++++|.+... .+...| .+++.++++++++.+|++++++++. .++|+|+.+ +++|...|+++
T Consensus 71 Gd~Viv~~~t~~~~~~---------~~~~~G--~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Iip~-~~~G~~~d~~~ 137 (376)
T TIGR02379 71 GDEVIMPSYTFVSTAN---------AFVLRG--AKIVFVDIRPDTMNIDETLIESAIT-HRTKAIVPV-HYAGVACDMDT 137 (376)
T ss_pred cCEEEECCCCcHHHHH---------HHHHcC--CEEEEEecCCCcCCCCHHHHHHhcC-cCceEEEEe-CCCCCccCHHH
Confidence 9999999988865432 122334 4677777787778899999999886 478988744 47899999999
Q ss_pred HHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCc---CCCCCeEEEEeeCCCCCCCCCCCCCcccchH
Q 012104 201 FRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKS---LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE 276 (471)
Q Consensus 201 i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~---l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~ 276 (471)
|.++|+++|++||+|++|+.|..+.|. ++. ..|+.++|+|++ .+|++||+++++++ ++.
T Consensus 138 I~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~--------------~~~ 200 (376)
T TIGR02379 138 IMALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ--------------AFI 200 (376)
T ss_pred HHHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH--------------HHH
Confidence 999999999999999999877544443 222 358888998865 45779999999864 344
Q ss_pred hhhhhcCC--------------------CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC---C
Q 012104 277 DKINFAVF--------------------PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK---G 333 (471)
Q Consensus 277 ~~i~~~~~--------------------~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~---g 333 (471)
+++..... .|+..-.. ...|++. +.++ ..+++..++..++++.+.+.|.+. +
T Consensus 201 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~-~~~Aa~g--~~qL--~~l~~~~~~r~~~~~~y~~~L~~~~~~~ 275 (376)
T TIGR02379 201 ERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPS-ELQAAYL--WAQL--EQADRINQDRLATWQLYQDALKPLEEKG 275 (376)
T ss_pred HHHHHHHHhCCCCccccccCCCcceeeeecccCCcc-HHHHHHH--HHHH--HHhHHHHHHHHHHHHHHHHHhccCCcCC
Confidence 43322110 11110111 1223332 2222 246677788888888888888764 2
Q ss_pred -ceEee--CCC-C-CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCC----C-------------CCeeEEe
Q 012104 334 -YSLVT--GGT-E-NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL----A-------------PGGVRIG 391 (471)
Q Consensus 334 -~~i~~--~~~-~-~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~----~-------------~~~iRig 391 (471)
..+.. .+. . .|++++.+.. +.+.+++.+.|.+.||.++....|.+..+. . ...|.|.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP 354 (376)
T TIGR02379 276 IIELPSIPNGCQHNAHMFYIKLKD-EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLP 354 (376)
T ss_pred eeeCCCCCCCCeeeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEcc
Confidence 22211 111 1 2445565543 357889999999999998866555433210 0 1123332
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+ ..+++++|++++++.|.+++
T Consensus 355 ~----~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 355 L----YYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred C----CCCCCHHHHHHHHHHHHHHh
Confidence 2 23578999999999987754
No 143
>PRK03321 putative aminotransferase; Provisional
Probab=99.90 E-value=7.1e-22 Score=198.08 Aligned_cols=313 Identities=16% Similarity=0.125 Sum_probs=210.5
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-H
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~ 108 (471)
+.|+|..+++. .++.+++++...+.. . ..||. ...+.+ ++.+++++|++.+ +|..++|+ +
T Consensus 23 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~-------~g~~~l----r~~ia~~~~~~~~----~I~~~~G~~~ 85 (352)
T PRK03321 23 GAIKLSSNETPFGPLPSVRAAIARAAAG-V-NRYPD-------MGAVEL----RAALAEHLGVPPE----HVAVGCGSVA 85 (352)
T ss_pred cceeccCCCCCCCCCHHHHHHHHHHHHh-c-CcCCC-------CcHHHH----HHHHHHHhCcCHH----HEEECCCHHH
Confidence 46888777654 467899998776542 1 23332 122333 3567788887753 45556776 4
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE-
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC- 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~- 187 (471)
++..++.++++|||+|+++.|.|..+.. .+...| .+++.+++++ ++.+|++++++.+.. ++++|++
T Consensus 86 ~l~~~~~~~~~~gd~Vli~~p~y~~~~~---------~~~~~g--~~~~~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~ 152 (352)
T PRK03321 86 LCQQLVQATAGPGDEVIFAWRSFEAYPI---------LVQVAG--ATPVQVPLTP-DHTHDLDAMAAAITD-RTRLIFVC 152 (352)
T ss_pred HHHHHHHHhcCCCCEEEeCCCCHHHHHH---------HHHHcC--CEEEEccCCC-CCCCCHHHHHHhhcc-CCCEEEEe
Confidence 6777888889999999999887754321 112234 3555566553 478999999998864 7888774
Q ss_pred c-CCCCCccccHHHHHHHHHH--hCCEEEEeccccchhhccccCCCCCC----Ccc-EEEeCCCCcC--CCCCeEEEEee
Q 012104 188 G-GSAYPRDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKSL--RGPRAGMIFYR 257 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~----~aD-iv~~s~~K~l--~GprgG~i~~~ 257 (471)
+ +||+|..+|.+++.++|+. +|+++++|++|. ++.+.+..+.++. ..+ ++++|++|++ +|.|.|+++++
T Consensus 153 ~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~ 231 (352)
T PRK03321 153 NPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH 231 (352)
T ss_pred CCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC
Confidence 4 7899999999999999997 599999999997 6655443333332 123 7788999995 68899999987
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+.+...+. +.+...+.++ ..++.. ...+.+..+++.++.+.+.+.|++.|+.+.
T Consensus 232 ~---------------~~~~~~~~~~~~~--~~s~~~q~~a-~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~ 291 (352)
T PRK03321 232 P---------------EVIAALRKVAVPF--SVNSLAQAAA-IASLAA--EDELLERVDAVVAERDRVRAALRAAGWTVP 291 (352)
T ss_pred H---------------HHHHHHHHhcCCC--CCCHHHHHHH-HHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 6 5566555432222 2222222222 234432 234555566667777788899988887653
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+ .++.++|+++.. +..++.+.|.++||.+.+ + ...+|||++. ..++++++.++|++++
T Consensus 292 -~-~~g~~i~i~l~~---~~~~~~~~l~~~gI~v~~----~-----~~~~iRi~~~-------~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 292 -P-SQANFVWLPLGE---RTADFAAAAAEAGVVVRP----F-----AGEGVRVTIG-------APEENDAFLRAARAWR 349 (352)
T ss_pred -C-CCCCEEEEeCCC---CHHHHHHHHHHCCEEEEc----c-----CCCcEEEeeC-------CHHHHHHHHHHHHHHh
Confidence 2 235578888742 467788888999999965 1 1246999972 3789999999998764
No 144
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.90 E-value=2.9e-23 Score=202.66 Aligned_cols=222 Identities=18% Similarity=0.106 Sum_probs=159.8
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
++++++++||++. +.+.+++++.|+.+++.++++|||+|++.++.|.++.. .+...|.....++...
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~---------~~~~~g~~~~~v~~~~ 130 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVIN---------GLVLSGAVPVYLKPER 130 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHH---------HHHHCCCEEEEecCcc
Confidence 4578899999876 44546666789999999999999999999987765431 1233454333333222
Q ss_pred cCC---CCCCCHHHHHHHhhh-CCCcEEE-EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC-C-C
Q 012104 162 NSS---TGYIDYDKLEEKALD-FRPKLII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF-E-Y 234 (471)
Q Consensus 162 ~~~---~~~iD~~~le~~~~~-~~pklIi-~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~-~-~ 234 (471)
+++ .+.+|++++++.+++ .++++|+ ++++++|...|+++|.++|+++|+++++|++|.+++.+.+..+... . +
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~ 210 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG 210 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcC
Confidence 221 147999999999875 3578776 4477889999999999999999999999999986665544433322 2 7
Q ss_pred ccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 235 CHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 235 aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
+|++++|+||+++||++ |++..+++. ....++.........++|+...++++..+++.+.. +..+
T Consensus 211 ~div~~S~hK~l~g~~~~~~l~~~~~~-------------~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~-~g~~ 276 (294)
T cd00615 211 ADIVVQSTHKTLPALTQGSMIHVKGDL-------------VNPDRVNEALNLHQSTSPSYLILASLDVARAMMAL-EGKE 276 (294)
T ss_pred CcEEEEchhcccchHhHHHHHHhCCCc-------------CCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH-HhHH
Confidence 89999999999999876 566565531 11233433323334568899999999988887643 3466
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012104 314 YAKQVKANAVALGNYLT 330 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~ 330 (471)
+.++.+++++.+++.|.
T Consensus 277 ~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 277 LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78888999999998875
No 145
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.3e-21 Score=194.71 Aligned_cols=315 Identities=16% Similarity=0.138 Sum_probs=202.1
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..++|. ++|.+++++.+.+.. ..+||.. | ...+ ++.+++.++++.+ +|..++|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~----~---~~~l----r~~ia~~~~~~~~----~I~it~G~~ 92 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAER--VHSYPKA----S---HADL----TAALADRWDVSPE----QVWLANGGD 92 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCCC----C---HHHH----HHHHHHHhCCCcc----eEEECCCHH
Confidence 457889888764 478888888766532 1244421 1 1223 3456677788764 45555554
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~pklIi 186 (471)
+|+..++.++++|||.|++.+|.|+.+.. .....|..+ +.++++. +++.+|.+++++.. .++|+|+
T Consensus 93 ~al~~~~~~~~~~gd~V~v~~P~y~~~~~---------~~~~~g~~~--~~~~l~~~~~~~~~~~~~~~~~--~~~k~i~ 159 (357)
T PRK14809 93 GALDYLARAMLDPGDTVLVPDPGFAYYGM---------SARYHHGEV--REYPVSKADDFEQTADTVLDAY--DGERIVY 159 (357)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCChHHHHH---------HHHHcCCeE--EEEecccCcCCCcCHHHHHHhh--cCCcEEE
Confidence 69999999999999999999998864321 122334433 4444442 34678888877654 2578777
Q ss_pred E-c-CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCCCcc--EEEeCCCCcC--CCCCeEEEEeeC
Q 012104 187 C-G-GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFEYCH--IVTTTTHKSL--RGPRAGMIFYRK 258 (471)
Q Consensus 187 ~-~-~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~~aD--iv~~s~~K~l--~GprgG~i~~~~ 258 (471)
+ + +||+|..++.+++.++|+.. +++||+|++|. .+...+....-++..+ +++.|++|++ +|.|.||+++++
T Consensus 160 l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~ 238 (357)
T PRK14809 160 LTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYG-EFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE 238 (357)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhh-hccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH
Confidence 4 4 78999999999988888765 88999999997 5543221110111222 7789999995 799999999987
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEee
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVT 338 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~ 338 (471)
++.+++.+...+. +.+...+.++ ..++.. ...+++..+.+.++.+.+.+.|...++
T Consensus 239 ---------------~~~~~~~~~~~~~--~~~~~~~~~a-~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~---- 294 (357)
T PRK14809 239 ---------------EWADAYARVNTPF--AASELACRAG-LAALDD--DEHVERTVETARWAREYIREELDAPTW---- 294 (357)
T ss_pred ---------------HHHHHHHHhCCCC--CCCHHHHHHH-HHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCccC----
Confidence 4555565433222 1112222222 223321 223455666666667777777765332
Q ss_pred CCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 339 GGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 339 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+.++.++|+++. +..++.+.|.++||.|.++..++ .++++||++. ..+++++..+.|.++++
T Consensus 295 -~~~g~f~~~~~~----~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRls~~-------~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 295 -ESAGNFVLAEVG----DASAVAEAAQERGVIVRDCTSFG-----LPECIRITCG-------TREETERAVEVLNEVLA 356 (357)
T ss_pred -CCCCCEEEEECC----CHHHHHHHHHHCCEEEEECccCC-----CCCeEEEecC-------CHHHHHHHHHHHHHHhc
Confidence 234457788763 45778788899999999876554 1368999962 25788888888877653
No 146
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.90 E-value=1.3e-21 Score=214.37 Aligned_cols=366 Identities=18% Similarity=0.147 Sum_probs=228.0
Q ss_pred CeeEe-cCCCCCcHHHHH-HHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 33 GIELI-ASENFTSFAVIE-ALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 33 ~i~li-~s~n~~s~~v~~-a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
.+-|- ++....++.+.+ ++...+.+.+ ++|+..+..+....+.+| .++++++++||++.+++ ..|++.++|+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e-~aR~~ia~~lga~~~~~-~VvFtsnaT~al 110 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIE-SARQQVLEYFNAPPSDY-ACVFTSGATAAL 110 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHH-HHHHHHHHHhCCCccce-EEEEeCChHHHH
Confidence 34443 344555654444 4444444433 455543434445555666 47899999999976432 235555667899
Q ss_pred HHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-------CCCCCCH--HHHHHHhh--
Q 012104 111 FAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-------STGYIDY--DKLEEKAL-- 178 (471)
Q Consensus 111 ~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-------~~~~iD~--~~le~~~~-- 178 (471)
.++..++ +++||+|++....|.+.+. .. ......| +++..++++. +.+.+|. +++++.++
T Consensus 111 nlva~~l~~~~gd~Iv~t~~eH~svl~-~~-----~~a~~~G--~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 182 (805)
T PLN02724 111 KLVGETFPWSSESHFCYTLENHNSVLG-IR-----EYALEKG--AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSK 182 (805)
T ss_pred HHHHHHCCCCCCCeEEEeeccccchHH-HH-----HHHHHcC--CeEEeccchhccccccccccccccchhhhhhhhhhh
Confidence 9998888 8999999998777765432 10 0011123 3444444431 1234443 66776532
Q ss_pred -------hCCCcEEEEc--CCCCCccccHHHHHHHHHHh--------CCEEEEeccccchhhccccCCCCCC--CccEEE
Q 012104 179 -------DFRPKLIICG--GSAYPRDWDYARFRAVADKC--------GALLLCDMAHISGLVAAQEAANPFE--YCHIVT 239 (471)
Q Consensus 179 -------~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~--------g~~livD~a~~~glv~~g~~~~p~~--~aDiv~ 239 (471)
..+++||.+. .|.+|...|++.+.++++.. ++++++|++|++|. .|..+. ++|+++
T Consensus 183 l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~-----~piDv~~~~~Dfl~ 257 (805)
T PLN02724 183 LQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT-----SPPDLSRYPADFVV 257 (805)
T ss_pred hccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC-----CCCChhhcCCCEEE
Confidence 1345788765 56799999999876666543 35899999998774 333443 699999
Q ss_pred eCCCCcCCCCCe-EEEEeeCCC----CCCCCCCCCCc-cc---chHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 240 TTTHKSLRGPRA-GMIFYRKGP----KPPKKGQPEGA-VY---DFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 240 ~s~~K~l~Gprg-G~i~~~~~~----~~~~~~~~~i~-~~---~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
+|+||++.||.| |+++.+++. .+...+|..+. .. .+.............|+|+...+++++.|++.+..-+
T Consensus 258 ~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig 337 (805)
T PLN02724 258 VSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLT 337 (805)
T ss_pred EecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhC
Confidence 999999877997 888888753 22222332211 00 0000000000012347899999999999998876657
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-------CceEeeCCC-----C--CeeEEEEccC---CCCCHHHHHHHHhhcCeEecc
Q 012104 311 FKAYAKQVKANAVALGNYLTGK-------GYSLVTGGT-----E--NHLVLWDLRP---LGLTGNKVEKLCDLCNITVNK 373 (471)
Q Consensus 311 ~~~~~~~~~~na~~l~~~L~~~-------g~~i~~~~~-----~--~~~~~v~~~~---~~~~~~~~~~~L~~~gI~v~~ 373 (471)
+++..++....+++|.+.|.+. +++++.... . ..++.+.+.. ..+...++..++.+.||.++.
T Consensus 338 ~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~ 417 (805)
T PLN02724 338 ISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRT 417 (805)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEee
Confidence 7888888899999999999876 366653210 1 1233333321 124456677888889999988
Q ss_pred CCcCCCC---C---------------------------CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 374 NAVFGDS---S---------------------------ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 374 ~~~p~~~---~---------------------------~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
|...... . ....+.+|+|+..+++ .+|++++.++|++.....
T Consensus 418 G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt----~eDvd~lv~~l~~~~~~~ 489 (805)
T PLN02724 418 GCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMST----FEDCQKFIDFIISSFVST 489 (805)
T ss_pred ccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCC----HHHHHHHHHHHHHHhhcC
Confidence 7543211 0 0123789999988876 799999999999976543
No 147
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.90 E-value=5.8e-21 Score=194.20 Aligned_cols=338 Identities=12% Similarity=0.035 Sum_probs=220.7
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC-C-CCCceeeecCChHHHHHHHHHHhc
Q 012104 41 NFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-P-TQWGVNVQPYSGSPANFAAYTAVL 118 (471)
Q Consensus 41 n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~-~-~~~~~~v~~~sGt~A~~~~~~all 118 (471)
..+.|.+.+++.+.++..+ |+|.. .|. .. ++|+.+++++++++|++ . ++. .-+.+++||+||+.++.+..
T Consensus 51 t~~~p~~~~~~~~~l~~~~--~np~s---~~~-~~-~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~ar 122 (431)
T TIGR01788 51 TWMEPEARKLMDETINKNM--IDKDE---YPQ-TA-EIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAMK 122 (431)
T ss_pred CCCCHHHHHHHHHHHhcCC--CCccc---Ccc-HH-HHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHHH
Confidence 4567889999988876443 34433 122 23 78888999999999997 2 222 22336788999998876542
Q ss_pred --------CCC-----CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE
Q 012104 119 --------EPH-----DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 119 --------~pG-----D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI 185 (471)
+.| -+|++.+.+|.+.. +.+...| +++..++++++++.+|+++|++++.+ +|.+|
T Consensus 123 ~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~---------ka~~~lg--~~v~~i~~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 123 WRWRKRMEAAGKPTDKPNLVMGSNVQVCWE---------KFARYFD--VELREVPMDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHhcCCCCCCcEEEEcCcchHHHH---------HHHHHcC--ceeEEEecCCCceeeCHHHHHHHHhh-CCeEE
Confidence 112 36777776654322 1122234 45556677754468999999999974 57777
Q ss_pred EEc--CCCCCccccHHHHHHHHHHh------CCEEEEeccccchhh--ccccCCCCC--CCccEEEeCCCCcCCCCCe-E
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKC------GALLLCDMAHISGLV--AAQEAANPF--EYCHIVTTTTHKSLRGPRA-G 252 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~------g~~livD~a~~~glv--~~g~~~~p~--~~aDiv~~s~~K~l~Gprg-G 252 (471)
++. ++.+|.+.|+++|+++|+++ |+|+++|++|+.+.. ..+..+..+ .++|.++.|.||++.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 644 77899999999999999999 999999999984432 123333333 3789999999999889997 8
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhh-------hh-cCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKI-------NF-AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVA 324 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i-------~~-~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~ 324 (471)
+++++++- .+...+ .. ....+..++.....+++....++.+...++.+..++..+++++
T Consensus 271 ~l~~r~~~-------------~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~ 337 (431)
T TIGR01788 271 WVIWRDEE-------------ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARY 337 (431)
T ss_pred EEEEeChH-------------HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 88887641 011111 00 0001222232222333455566666667899999999999999
Q ss_pred HHHHHHcC-CceEeeCCCCCeeEEEEccCC---CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 325 LGNYLTGK-GYSLVTGGTENHLVLWDLRPL---GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 325 l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
|.+.|++. +|+++.++...+++.+.+.+. +++..++.+.|.+.|+.+.....|... .....+|+.+... .
T Consensus 338 l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~--~~~~~lR~~~~~~----~ 411 (431)
T TIGR01788 338 LAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNA--EDIVVMRIVVREG----F 411 (431)
T ss_pred HHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCcc--CCeEEEEEEecCC----C
Confidence 99999987 599875423445565555432 356678889999999987554333210 0124689876433 3
Q ss_pred CHHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~ 417 (471)
+.+.++++.+.|..++.
T Consensus 412 ~~~~~~~~~~~~~~~~~ 428 (431)
T TIGR01788 412 SRDLAELLIEDIEAALA 428 (431)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 45677777777766654
No 148
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=4.7e-21 Score=193.03 Aligned_cols=339 Identities=16% Similarity=0.083 Sum_probs=208.4
Q ss_pred ccccccccChHHHHHHHHHH-HhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHH
Q 012104 8 GNSSLETVDPEIHDLIEKEK-RRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRS 84 (471)
Q Consensus 8 ~~~~~~~~d~~~~~~~~~e~-~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~ 84 (471)
+++++...++..+..+.... ......++|..++.. .++.+++++.+.... .+|+.. .....+.+...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~~------~G~~~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPTT------AGTPELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCCc------cCCHHHHHHHHH
Confidence 34566777776666665433 333456788766543 257788887654321 123221 112234444446
Q ss_pred HHHHhcCCC-CCCCceeeecCChH-HHHHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 85 RALQTFHLD-PTQWGVNVQPYSGS-PANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 85 ~~~~lfg~~-~~~~~~~v~~~sGt-~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
++.+.+|.+ .+. .+|..++|+ +|+..++.++ ++|||+|++.+|.|.++.. .+...|. +++.++
T Consensus 74 ~l~~~~~~~~~~~--~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~~~~~- 139 (364)
T PRK07865 74 WLARRRGVTGLDP--AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV---------GARLAGA--TVVRAD- 139 (364)
T ss_pred HHHHHcCCCCCCc--ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH---------HHHhcCC--EEEecC-
Confidence 666666643 221 246666765 5777777887 7999999999999987642 1122333 333332
Q ss_pred cCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCCCC---
Q 012104 162 NSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--- 233 (471)
Q Consensus 162 ~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--- 233 (471)
++++++ ..++++|+++ +||+|..++.+ +|.++|+++|++||+|++|. .+.+.+..++.+.
T Consensus 140 -------~~~~l~----~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 207 (364)
T PRK07865 140 -------SLTELG----PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRV 207 (364)
T ss_pred -------ChhhCC----cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCccccccc
Confidence 223322 2468888754 78999998864 66678899999999999997 5555442222221
Q ss_pred ---C--ccEEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHh
Q 012104 234 ---Y--CHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (471)
Q Consensus 234 ---~--aDiv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~ 306 (471)
. -.++++|++|+ ++|.|+||+++++ ++.+.+.........+.+...+ .++..++..
T Consensus 208 ~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~---------------~~~~~~~~~~~~~~~~~~~~~q-~~~~~~l~~- 270 (364)
T PRK07865 208 CGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP---------------ALVAELLEVRKHAGMMVPAPVQ-AAMVAALGD- 270 (364)
T ss_pred cCCccceEEEEeechhccCCCceeeEEEecCH---------------HHHHHHHHHHHhcCCCcCHHHH-HHHHHHhCC-
Confidence 1 12889999998 4799999999876 4555444322111112222222 223333432
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCC
Q 012104 307 STPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPG 386 (471)
Q Consensus 307 ~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 386 (471)
....++..+.+.++.+.+.+.|++.|+.+. .+..+.++|+.+. .+..++.+.|.+.||.+.++..++. ..++
T Consensus 271 -~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~---~~~~~~~~~l~~~gv~v~pg~~f~~---~~~~ 342 (364)
T PRK07865 271 -DAHVREQRERYARRRAVLRPALEAAGFRVD-HSEAGLYLWATRG---EDCWDTVAWLAERGILVAPGDFYGP---AGAQ 342 (364)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHcCCccc-CCCccEEEEEeCC---CCHHHHHHHHHHCCEEEeCccccCc---CCCC
Confidence 223456666777888889999988888764 3445667888763 2456777888999999988765432 1347
Q ss_pred eeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 387 GVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 387 ~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
++||++.. .++++++..+.|
T Consensus 343 ~iRi~~~~------~~~~~~~~~~~l 362 (364)
T PRK07865 343 HVRVALTA------TDERIAAAVERL 362 (364)
T ss_pred EEEEEecC------CHHHHHHHHHHh
Confidence 99999832 267887777665
No 149
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=3.3e-21 Score=194.78 Aligned_cols=322 Identities=14% Similarity=0.082 Sum_probs=205.1
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccC-CCCCCCCCCCCcchhHHHHHHHHHHHHHHhc--C--CCCCCCceeeecC
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKY-SEGMPGNRYYGGNEFIDEIENLCRSRALQTF--H--LDPTQWGVNVQPY 104 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~-~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lf--g--~~~~~~~~~v~~~ 104 (471)
..+.|..+++. +|+.+++++.+.+.+.+ ..+||. .| ...+.+...+++.+.+ | ++.+ +|..+
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G---~~~Lr~aia~~~~~~~~~~~~v~~~----~I~it 97 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD----GG---HEALKQAIAEYVNESAAGSSQITPA----NISVG 97 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC----Cc---hHHHHHHHHHHhCccccccCCCCHH----HEEEc
Confidence 35778778875 57899999887654422 123432 12 1233322223333222 1 4442 46666
Q ss_pred ChH-HHHHHHHHHhcCCCC-EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---
Q 012104 105 SGS-PANFAAYTAVLEPHD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD--- 179 (471)
Q Consensus 105 sGt-~A~~~~~~all~pGD-~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~--- 179 (471)
+|+ +|+..++.+++.+|| +|++.+|+|+++.. .+...| .+++.++++++++.+|++++++.+..
T Consensus 98 ~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 166 (374)
T PRK02610 98 NGSDELIRSLLIATCLGGEGSILVAEPTFSMYGI---------LAQTLG--IPVVRVGRDPETFEIDLAAAQSAIEQTQN 166 (374)
T ss_pred CChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHH---------HHHHcC--CEEEEecCCcccCCCCHHHHHHHHHhhcC
Confidence 776 588788888888886 89999999987642 122334 45556666655688999999998865
Q ss_pred CCCcEEEE-c-CCCCCccccHHHHHHHHHH-hCCEEEEeccccchhhccccCCCCCC-Ccc-EEEeCCCCc--CCCCCeE
Q 012104 180 FRPKLIIC-G-GSAYPRDWDYARFRAVADK-CGALLLCDMAHISGLVAAQEAANPFE-YCH-IVTTTTHKS--LRGPRAG 252 (471)
Q Consensus 180 ~~pklIi~-~-~s~~g~~~d~~~i~~ia~~-~g~~livD~a~~~glv~~g~~~~p~~-~aD-iv~~s~~K~--l~GprgG 252 (471)
.++|+|++ + +||+|..++.+++.++++- +|++||+|++|. .+.... ....+. +.. |++.|++|+ ++|.|.|
T Consensus 167 ~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~GlRiG 244 (374)
T PRK02610 167 PPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTT-LVGELAQHPNWVILRTFSKAFRLAAHRVG 244 (374)
T ss_pred CCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccc-hHHHHhcCCCEEEEEecchhccCccccee
Confidence 57898874 4 7899999999888777642 489999999986 443211 111122 212 789999999 4899999
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
|+++++ ++.+.+.....+. +.+...+. +...++... ..+.+..++..+..+.+.+.|++.
T Consensus 245 ~~v~~~---------------~l~~~l~~~~~~~--~~~~~~q~-a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 304 (374)
T PRK02610 245 YAIGHP---------------ELIAVLEKVRLPY--NLPSFSQL-AAQLALEHR--QELLAAIPEILQERDRLYQALQEL 304 (374)
T ss_pred eeecCH---------------HHHHHHHHhcCCC--CCCHHHHH-HHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999876 4555565443222 22222332 233344321 234444445555667778888776
Q ss_pred -CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 333 -GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 333 -g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
|+.+. +.++.++|+++.. +.+..++.+.|.++||.|... .+++||++.. .+++++..+.
T Consensus 305 ~~~~~~--p~~g~f~~~~l~~-~~~~~~~~~~l~~~gi~v~~~----------~~~lRls~~~-------~~~~~~~l~~ 364 (374)
T PRK02610 305 PQLRVW--PSAANFLYLRLSQ-DAALAALHQALKAQGTLVRHT----------GGGLRITIGT-------PEENQRTLER 364 (374)
T ss_pred CCcEeC--CCcceEEEEeCCC-CCCHHHHHHHHHHCCEEEEeC----------CCeEEEeCCC-------HHHHHHHHHH
Confidence 66653 3456678998854 467788888899999999631 3689999731 4567777777
Q ss_pred HHHHHH
Q 012104 412 LHRAVT 417 (471)
Q Consensus 412 i~~~l~ 417 (471)
|.+++.
T Consensus 365 l~~~l~ 370 (374)
T PRK02610 365 LQAALT 370 (374)
T ss_pred HHHHHh
Confidence 766654
No 150
>PRK09105 putative aminotransferase; Provisional
Probab=99.90 E-value=4e-21 Score=193.58 Aligned_cols=311 Identities=18% Similarity=0.133 Sum_probs=207.4
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-HH
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SP 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t~ 108 (471)
+.+.|..++|. ++|.+++++...+... ..|+. .. ...+ ++.+++.+|++.+ +|..++| ++
T Consensus 44 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~------~~-~~~L----r~aia~~~~v~~e----~I~it~Gs~~ 106 (370)
T PRK09105 44 GAVFLNANECPLGPSPAARDAAARSAALS--GRYDL------EL-EDDL----RTLFAAQEGLPAD----HVMAYAGSSE 106 (370)
T ss_pred CcEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCC------ch-HHHH----HHHHHHHhCcChh----hEEEcCChHH
Confidence 45788878874 4789999987765321 12221 11 2233 3456778898774 3444555 57
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-E
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-C 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~ 187 (471)
++..++.++++|||+|++++|.|+++.. .....|. +++.++.+ +++.+|++++++.. .++++|+ +
T Consensus 107 ai~~~~~~l~~~gd~Vli~~P~y~~~~~---------~~~~~g~--~~~~v~~~-~~~~~d~~~l~~~~--~~~~~v~l~ 172 (370)
T PRK09105 107 PLNYAVLAFTSPTAGLVTADPTYEAGWR---------AADAQGA--PVAKVPLR-ADGAHDVKAMLAAD--PNAGLIYIC 172 (370)
T ss_pred HHHHHHHHHcCCCCEEEEeCCChHHHHH---------HHHHcCC--eEEEecCC-CCCCCCHHHHHhcC--CCCCEEEEe
Confidence 9999999999999999999999987642 1223343 44555555 35789999998763 4678776 5
Q ss_pred c-CCCCCccccHHHHHHHHHH--hCCEEEEeccccchhhccccCCCCCC----Ccc-EEEeCCCCc--CCCCCeEEEEee
Q 012104 188 G-GSAYPRDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE----YCH-IVTTTTHKS--LRGPRAGMIFYR 257 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~----~aD-iv~~s~~K~--l~GprgG~i~~~ 257 (471)
+ +||+|..++.+++.++++. +|++||+|++|. .+.. .++... +.+ +++.|++|+ ++|.|.||++++
T Consensus 173 nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~ 248 (370)
T PRK09105 173 NPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR 248 (370)
T ss_pred CCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecC
Confidence 5 7899999999999988765 389999999995 4322 122221 334 778899999 588899999987
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+... . .. .+......+...++.. ...+++..+++.++.+.+.+.|++.|+.+.
T Consensus 249 ~---------------~~i~~l~~~-~--~~-~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ 307 (370)
T PRK09105 249 P---------------DLLAKLARF-G--HN-PLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKKGYKCT 307 (370)
T ss_pred H---------------HHHHHHHhc-C--CC-CcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCcC
Confidence 6 455555543 1 11 1222222233334443 234466677788888999999998888774
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
. +..+ ++++++. .+..++.+.|.+.||.+... +. ..++++||++. ++++++++.+.|++++
T Consensus 308 ~-~~~~-f~~~~~~---~~~~~l~~~L~~~gI~v~~~--~~----~~~~~~Ris~~-------~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 308 P-SQAN-CFMVDVK---RPAKAVADAMAKQGVFIGRS--WP----IWPNWVRVTVG-------SEEEMAAFRSAFAKVM 368 (370)
T ss_pred C-CCCc-EEEEeCC---CCHHHHHHHHHHCCcEEecC--CC----CCCCeEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 3 3444 4456663 36678877787889999422 21 12479999973 2688999999988765
No 151
>PLN02672 methionine S-methyltransferase
Probab=99.90 E-value=4.1e-21 Score=209.95 Aligned_cols=333 Identities=13% Similarity=0.090 Sum_probs=215.6
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhcc-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNK-YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~-~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
.+.|.|..++|. +|+.+++++...+... +..|+| +. .+..++++++.+|.+.+.. -+|.+++|+
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~p--------dl----r~aLa~~la~~~Gv~~d~~-e~IIvt~Gs 763 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQNISESET--------DP----RPSILQFIKSNYGFPTDSC-TEFVYGDTS 763 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCCh--------HH----HHHHHHHHHHHhCcCCCCC-CEEEEeCCH
Confidence 466899888876 4789999987765321 111221 21 2233467888888875321 145566776
Q ss_pred H-HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhC-CCcE
Q 012104 108 P-ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDF-RPKL 184 (471)
Q Consensus 108 ~-A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~-~pkl 184 (471)
. ++..++.++++|||+|++++|+|+.+.. .+...|. +++.+++++ +++.+|+++++++++.. ++.+
T Consensus 764 ~elL~lll~aLl~pGD~VLVp~PtY~~Y~~---------~a~~~Ga--~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I 832 (1082)
T PLN02672 764 LALFNKLVLCCVQEGGTLCFPAGSNGTYVS---------AAKFLKA--NFRRIPTKSSDGFKLTAKTLASTLETVKKPWV 832 (1082)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCChHHHHH---------HHHHcCC--EEEEEecccccCCCCCHHHHHHHhccCCCCEE
Confidence 4 6778889999999999999999987653 1233444 555556553 45789999999998653 3456
Q ss_pred EEEc-C-CCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCC--CC-------CC---c-c-EEEeCCCCc
Q 012104 185 IICG-G-SAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAAN--PF-------EY---C-H-IVTTTTHKS 245 (471)
Q Consensus 185 Ii~~-~-s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~-------~~---a-D-iv~~s~~K~ 245 (471)
++++ + ||+|..++.+ +|.++|+++|++||+|++|. ++.+.+.... ++ .. . . +++.|++|.
T Consensus 833 ~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYs-dL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKk 911 (1082)
T PLN02672 833 YISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFS-GLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTE 911 (1082)
T ss_pred EEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCC-ccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHh
Confidence 6677 3 7999998765 55577899999999999997 6666543211 11 11 1 2 678899987
Q ss_pred --CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHH-HHHHHhcc----HHHHHHHHHH
Q 012104 246 --LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALA-VALKQAST----PAFKAYAKQV 318 (471)
Q Consensus 246 --l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a-~al~~~~~----~~~~~~~~~~ 318 (471)
++|.|.||++++++ ++.+.+.... ...+.....+.++.+ .++..... ...++..+.+
T Consensus 912 f~lpGLRIGylIap~~--------------eLi~~l~~~~--~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~L 975 (1082)
T PLN02672 912 LLSGGHEFGFLALNDS--------------VLIDAFHSAP--GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKIL 975 (1082)
T ss_pred hccHHHHheeEEeCCH--------------HHHHHHHHhh--hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 78999999998763 3556554421 111111222222221 12111001 2345666678
Q ss_pred HHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccC----------------CCCCHHHHHH-HHhhcCeEeccCCcCCCCC
Q 012104 319 KANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP----------------LGLTGNKVEK-LCDLCNITVNKNAVFGDSS 381 (471)
Q Consensus 319 ~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~----------------~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~ 381 (471)
.++.+++.+.|++.|+.+. .+.++.++|+++.. .+++..++.+ ++++.||.++++..++.
T Consensus 976 k~rRd~L~e~L~~~Gi~v~-~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~-- 1052 (1082)
T PLN02672 976 KSRAERLKETLEACGWDVL-EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGI-- 1052 (1082)
T ss_pred HHHHHHHHHHHHHCCCeEe-cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCC--
Confidence 8889999999999998874 45678888887531 0346677755 45567999998865542
Q ss_pred CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 382 ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 382 ~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
++++||++. + .++++++..+.|.+..
T Consensus 1053 ---~g~~RIsfa--~----~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1053 ---PGYCRFSFA--L----EDSEFDRALKAIARFK 1078 (1082)
T ss_pred ---CCeEEEEec--C----CHHHHHHHHHHHHHHH
Confidence 479999983 2 3667777777766543
No 152
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=5.3e-21 Score=191.99 Aligned_cols=319 Identities=12% Similarity=0.059 Sum_probs=203.9
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..++|. +|+.+++++...+... ..||.. ....+ ++.++++++++.+ +|..++|+
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~--~~y~~~-------~~~~l----r~~ia~~~~~~~~----~i~it~Ga~ 82 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCA--ERYPDV-------EYRHL----HQALARHHQVPAS----WILAGNGET 82 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhc--ccCcCc-------cHHHH----HHHHHHHhCcChh----hEEECCCHH
Confidence 346888888876 5789999987655321 133321 12222 4567778888764 45555665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi 186 (471)
+++..++.++ .||| +++.+|.|..+.. .+...| .+++.++.+++ ++.+| +++++.+. .++|+|+
T Consensus 83 ~~l~~~~~~l-~~g~-viv~~P~y~~~~~---------~~~~~g--~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~ 147 (356)
T PRK08056 83 ESIFAVVSGL-KPRR-AMIVTPGFAEYRR---------ALQQVG--CEIRRYSLREADGWQLT-DAILEALT-PDLDCLF 147 (356)
T ss_pred HHHHHHHHHh-CCCC-EEEeCCCcHHHHH---------HHHHcC--CeEEEEecccccCCCcc-HHHHHhcc-CCCCEEE
Confidence 6888888776 7887 5667777765431 122334 35555555533 34566 34555554 5788877
Q ss_pred E-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhcccc-CCCCCC--CccEEEeCCCCc--CCCCCeEEEEe
Q 012104 187 C-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE--YCHIVTTTTHKS--LRGPRAGMIFY 256 (471)
Q Consensus 187 ~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~~--~aDiv~~s~~K~--l~GprgG~i~~ 256 (471)
+ + +||+|..++ +++|.++|+++|++|++|++|. ++...+. ..+.+. ...+++.|+||+ ++|.|.||+++
T Consensus 148 l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~ 226 (356)
T PRK08056 148 LCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFI-DFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVN 226 (356)
T ss_pred EeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchh-ccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeec
Confidence 5 4 789999998 6677888999999999999986 5554331 111222 235889999999 57889999998
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA-FKAYAKQVKANAVALGNYLTGK-GY 334 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~-~~~~~~~~~~na~~l~~~L~~~-g~ 334 (471)
+++ ++.+.+.+...+. +++.....+...++. ... .++..+++.++++.+.+.|++. |+
T Consensus 227 ~~~--------------~~~~~l~~~~~~~---~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 286 (356)
T PRK08056 227 SDD--------------AAVARMRRQQMPW---SINAFAALAGEVILQ---DRAYQQATWQWLAEEGARFYQALCALPLL 286 (356)
T ss_pred CCH--------------HHHHHHHHhCCCC---chhHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 542 3444454432221 112222222222231 223 3555677788888999999887 77
Q ss_pred eEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 335 SLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 335 ~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.+. . +++.++|+++.. +..++.+.|.+.||.+.++..+.. ...+++||++. .+++++++.+.|++
T Consensus 287 ~~~-~-~~~~~~~~~~~~---~~~~~~~~l~~~gI~v~~~~~f~~---~~~~~iRis~~-------~~~~~~~l~~~l~~ 351 (356)
T PRK08056 287 TVW-P-GRANYLFLRCER---PDIDLQRALLTQRILIRSCANYPG---LDSRYYRVAIR-------SAAENERLLAALRN 351 (356)
T ss_pred EEc-C-CCCcEEEEEcCC---ChHHHHHHHHHCCeEEEECCCCCC---CCCCEEEEEEc-------CHHHHHHHHHHHHH
Confidence 764 2 345677888753 356787888889999988764421 12468999972 36899999999987
Q ss_pred HHH
Q 012104 415 AVT 417 (471)
Q Consensus 415 ~l~ 417 (471)
+++
T Consensus 352 ~~~ 354 (356)
T PRK08056 352 VLT 354 (356)
T ss_pred HHc
Confidence 654
No 153
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.90 E-value=1.3e-21 Score=196.75 Aligned_cols=315 Identities=17% Similarity=0.144 Sum_probs=203.1
Q ss_pred HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCCCE
Q 012104 45 FAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDR 123 (471)
Q Consensus 45 ~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pGD~ 123 (471)
.+.++++...+.+.+.. .....++++| +.++++||.++ .+.++|||.|+.+++.++ ++|||+
T Consensus 5 ~e~~~~v~~~l~s~~~~--------~~g~~~~~fE----~~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gde 67 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLS--------TYGPYVEEFE----KEFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDE 67 (363)
T ss_dssp HHHHHHHHHHHHHTCCS--------SSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSE
T ss_pred HHHHHHHHHHHHhCCcc--------CCCHHHHHHH----HHHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCce
Confidence 45566666666555421 1125677777 57889999886 467899999999999999 899999
Q ss_pred EEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHH
Q 012104 124 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRA 203 (471)
Q Consensus 124 Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ 203 (471)
|+++..++.+..+ .+...| .+++.++++++++.+|++.+++++.+ ++|.|+.. +.+|...|+++|.+
T Consensus 68 Vi~p~~t~~~~~~---------ai~~~G--~~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~ 134 (363)
T PF01041_consen 68 VIVPAYTFPATAS---------AILWAG--AEPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRA 134 (363)
T ss_dssp EEEESSS-THHHH---------HHHHTT---EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHH
T ss_pred EecCCCcchHHHH---------HHHHhc--cEEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHH
Confidence 9999987764331 222333 68888999999999999999999974 67877755 35788889999999
Q ss_pred HHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhh
Q 012104 204 VADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF 281 (471)
Q Consensus 204 ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~ 281 (471)
+|+++|++||.|++|+.|..+.|..... ..|+.++||| |.++...||+++++++ ++.+++..
T Consensus 135 ~~~~~~i~lIeD~a~a~g~~~~g~~~G~--~gd~~~fSf~~~K~i~~geGG~v~~~~~--------------~~~~~~~~ 198 (363)
T PF01041_consen 135 IARKHGIPLIEDAAQAFGARYKGRPVGS--FGDIAIFSFHPTKIITTGEGGAVVTNDP--------------ELAERARA 198 (363)
T ss_dssp HHHHTT-EEEEE-TTTTT-EETTEETTS--SSSEEEEESSTTSSS-SSS-EEEEESTH--------------HHHHHHHH
T ss_pred HHHHcCCcEEEccccccCceeCCEeccC--CCCceEecCCCCCCCcCCCCeeEEecHH--------------HHHHHhhh
Confidence 9999999999999999987776644332 4588888887 8798889999999985 55555543
Q ss_pred cCCCCCC-------------C-CCcH-HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCC---
Q 012104 282 AVFPSLQ-------------G-GPHN-HQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTE--- 342 (471)
Q Consensus 282 ~~~~~~~-------------g-~p~~-~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~--- 342 (471)
....+.. | ...+ ...||+ ++.++ ..+++..++..++++.+.+.|.+. ++........
T Consensus 199 ~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAi--gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~ 274 (363)
T PF01041_consen 199 LRNHGRSRDAFRRYRHELPPGYNFRMSELQAAI--GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAER 274 (363)
T ss_dssp HTBTTEETSECSTTEESSSS--B-B-BHHHHHH--HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEE
T ss_pred hhccCcCccccccccccccCCcccccHHHHHHH--HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 2211110 0 0011 222333 33333 256788888899999999999887 5544332111
Q ss_pred --CeeEEEEccCC-CCCHHHHHHHHhhcCeEeccCC-cCCCCCCC-----------CC-------CeeEEecCCCCCcCC
Q 012104 343 --NHLVLWDLRPL-GLTGNKVEKLCDLCNITVNKNA-VFGDSSAL-----------AP-------GGVRIGTPAMTSRGL 400 (471)
Q Consensus 343 --~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~-~p~~~~~~-----------~~-------~~iRig~~~~t~~g~ 400 (471)
.+.+.+.+.+. ..+.+++.+.|.+.||.+.... .|.+..+. .+ ..|.+.+ ...+
T Consensus 275 ~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~----~~~l 350 (363)
T PF01041_consen 275 SSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI----HPRL 350 (363)
T ss_dssp BCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH----STTS
T ss_pred cccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC----CCCC
Confidence 12233334332 1367889999999999998765 23221110 00 1334433 2346
Q ss_pred CHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLH 413 (471)
Q Consensus 401 ~~~d~~~l~~~i~ 413 (471)
+++|++++++.|+
T Consensus 351 t~edv~~I~~~ir 363 (363)
T PF01041_consen 351 TEEDVDYIAEAIR 363 (363)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHhhccC
Confidence 7888888888763
No 154
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=7.1e-22 Score=198.84 Aligned_cols=270 Identities=21% Similarity=0.268 Sum_probs=183.0
Q ss_pred eeecCChHHH-HHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec-CCCCCCCHHHHHHH
Q 012104 100 NVQPYSGSPA-NFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEK 176 (471)
Q Consensus 100 ~v~~~sGt~A-~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~-~~~~~iD~~~le~~ 176 (471)
+|.+++|+.+ +..++..+ .++||+|++++|.|+++.. .+...|. ++++++++ .+++.+|++++++.
T Consensus 70 ~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~~---------~~~~~g~--~~~~~~~~~~~~~~~d~~~l~~~ 138 (363)
T PF00155_consen 70 NILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYIE---------AARLLGA--EVIPVPLDSENDFHLDPEALEEA 138 (363)
T ss_dssp GEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHHH---------HHHHTTS--EEEEEEEEETTTTEETHHHHHHH
T ss_pred EEEEecccccchhhhhhcccccccccceecCCccccccc---------cccccCc--eeeeccccccccccccccccccc
Confidence 5777889865 45555666 6799999999999987642 2233444 45555543 25689999999999
Q ss_pred hhhC-----CCcEEE-Ec-CCCCCccccHHHHHHH---HHHhCCEEEEeccccchhhccccCC----CCCC-Ccc-EEEe
Q 012104 177 ALDF-----RPKLII-CG-GSAYPRDWDYARFRAV---ADKCGALLLCDMAHISGLVAAQEAA----NPFE-YCH-IVTT 240 (471)
Q Consensus 177 ~~~~-----~pklIi-~~-~s~~g~~~d~~~i~~i---a~~~g~~livD~a~~~glv~~g~~~----~p~~-~aD-iv~~ 240 (471)
+++. ++++|+ ++ +||+|..++.+++.+| |+++|++|++|++|. ++....... ..++ +.+ +++.
T Consensus 139 l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~ 217 (363)
T PF00155_consen 139 LDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVG 217 (363)
T ss_dssp HHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEE
T ss_pred cccccccccccceeeecccccccccccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeee
Confidence 9864 456666 44 7899999988777666 999999999999997 554432210 1112 233 8899
Q ss_pred CCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhc--cHHHHHHHH
Q 012104 241 TTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS--TPAFKAYAK 316 (471)
Q Consensus 241 s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~--~~~~~~~~~ 316 (471)
|++|+ ++|.|.|++++++ ++.+.+.....++.. +.....+++..+.... ..++++..+
T Consensus 218 S~SK~~g~~GlRvG~i~~~~---------------~~~~~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~ 279 (363)
T PF00155_consen 218 SLSKSFGLPGLRVGYIVAPP---------------ELIERLRRFQRSGLS---SSPMQAAAAAALSDPELVEKWLEELRE 279 (363)
T ss_dssp ESTTTTTSGGGTEEEEEEEH---------------HHHHHHHHHHHHTTS---SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccccccccccchh---------------hhhhhhhhccccccc---cchhhHHHHHhhhcccccccccccchh
Confidence 99998 4788889999976 566666544333222 2222222222333222 125677888
Q ss_pred HHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhh-cCeEeccCCcCCCCCCCCCCeeEEecCCC
Q 012104 317 QVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDL-CNITVNKNAVFGDSSALAPGGVRIGTPAM 395 (471)
Q Consensus 317 ~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~-~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 395 (471)
++.++++.+.+.|++.|+.+..+ ..++++|+.+... +..++.+.|.+ .||.+.++..|+- ++++||++ +.
T Consensus 280 ~l~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~--~~~~l~~~L~~~~gi~v~pg~~~~~-----~~~iRi~~-a~ 350 (363)
T PF00155_consen 280 RLRENRDLLREALEEIGITVLPP-EAGFFLWVRLDPN--DAEELAQELLEEYGILVRPGSYFGV-----PGYIRISL-AS 350 (363)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEHH-SBSSEEEEEESHH--HHHHHHHHHHHHHTEEEEEGGGGTS-----TTEEEEEG-GC
T ss_pred hHHHHHHHHHHHHHHhhhheeec-cCccEEEEEcccc--hHHHHHHHHHHhCCEEEEecCCCCC-----CCEEEEEe-cc
Confidence 88999999999999889998654 4677788876532 45666555555 4999998876652 67999998 33
Q ss_pred CCcCCCHHHHHHHHHHH
Q 012104 396 TSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 396 t~~g~~~~d~~~l~~~i 412 (471)
. ++++++++++.|
T Consensus 351 ~----~~e~~~~~~~~l 363 (363)
T PF00155_consen 351 H----SEEDLEEALERL 363 (363)
T ss_dssp S----CHHHHHHHHHHH
T ss_pred C----CHHHHHHHHhhC
Confidence 2 478998888764
No 155
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.90 E-value=2.4e-21 Score=193.47 Aligned_cols=314 Identities=14% Similarity=0.156 Sum_probs=210.5
Q ss_pred CCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCcc
Q 012104 67 RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKK 146 (471)
Q Consensus 67 r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~ 146 (471)
.-|+|......+| +.++++||.++ .|.++||+.|+.+++...++|||.| +++.|..... ..
T Consensus 65 e~yag~~s~~~lE----~~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~--------ah 125 (450)
T TIGR02618 65 EAYAGSRNFYHLE----RTVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTR--------YH 125 (450)
T ss_pred hhhcCCCcHHHHH----HHHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHH--------HH
Confidence 3466666677888 56788999987 4678999999877776779999988 4444321100 01
Q ss_pred ceeccceeEEEeeeec---------CCCCCCCHHHHHHHhhhCC---CcEEE-Ec-CCC-CCccc---cHHHHHHHHHHh
Q 012104 147 ISATSIYFESLPYKVN---------SSTGYIDYDKLEEKALDFR---PKLII-CG-GSA-YPRDW---DYARFRAVADKC 208 (471)
Q Consensus 147 ~~~~g~~~~~~~~~v~---------~~~~~iD~~~le~~~~~~~---pklIi-~~-~s~-~g~~~---d~~~i~~ia~~~ 208 (471)
+...|. .++.+..+ +.++.+|+++|++.+.... .++|. .. .|. .|.++ ++++++++|+++
T Consensus 126 Ie~~Ga--v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~ 203 (450)
T TIGR02618 126 QEKNGA--TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH 203 (450)
T ss_pred HHhCCe--EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc
Confidence 222332 22332222 4578999999999997532 22333 22 333 36764 468999999999
Q ss_pred CCEEEEeccccchh---h---ccccCCCC--------CCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccc
Q 012104 209 GALLLCDMAHISGL---V---AAQEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYD 274 (471)
Q Consensus 209 g~~livD~a~~~gl---v---~~g~~~~p--------~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~ 274 (471)
|+.|+.|+||.+|- + ..|....+ +.++|.+++|++|...+|-||+++++++ +
T Consensus 204 Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~--------------~ 269 (450)
T TIGR02618 204 GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD--------------E 269 (450)
T ss_pred CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH--------------H
Confidence 99999999998742 2 01222222 3489999999999998999999998875 6
Q ss_pred hHhhhhhc--CCCCC--CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEc
Q 012104 275 FEDKINFA--VFPSL--QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDL 350 (471)
Q Consensus 275 l~~~i~~~--~~~~~--~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~ 350 (471)
+.++++.. .+.|+ .|+..-..+.|++++|.+... ..|.++...++++|.+.|.+.|+.++. +.++|.+++|+
T Consensus 270 l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~Gvpv~~-p~ggh~V~vda 345 (450)
T TIGR02618 270 MFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAAGVPIVE-PVGGHAVFLDA 345 (450)
T ss_pred HHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHCCCcccC-CCCcceEEEEh
Confidence 77766654 34443 244344567788889988764 367788888999999999999999964 57789999986
Q ss_pred cCC--CC-----CHHHH-HHHHhhcCeEec-cCCcCC--CC---CCCC--CCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 351 RPL--GL-----TGNKV-EKLCDLCNITVN-KNAVFG--DS---SALA--PGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 351 ~~~--~~-----~~~~~-~~~L~~~gI~v~-~~~~p~--~~---~~~~--~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
... .+ .++.+ ..+-.+.||... .+++.. |+ .... -.-+|+..| +|-.+.+.|+.+++.+..
T Consensus 346 ~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaip---rr~yt~~h~~~v~~~~~~ 422 (450)
T TIGR02618 346 RRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIP---RRVYTYAHMDVVADGIIK 422 (450)
T ss_pred HHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccc---cccccHhHHHHHHHHHHH
Confidence 431 22 33444 444467777532 233211 11 1111 246898754 566778999999999999
Q ss_pred HHHHHHHH
Q 012104 415 AVTLTLEI 422 (471)
Q Consensus 415 ~l~~~~~~ 422 (471)
+.++...+
T Consensus 423 ~~~~~~~~ 430 (450)
T TIGR02618 423 LYKHRDDI 430 (450)
T ss_pred HHhhHhhc
Confidence 88876544
No 156
>PRK10534 L-threonine aldolase; Provisional
Probab=99.90 E-value=2.3e-21 Score=192.84 Aligned_cols=319 Identities=16% Similarity=0.163 Sum_probs=199.3
Q ss_pred eeEecCCCC-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 34 IELIASENF-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 34 i~li~s~n~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
|.|..++|. +||.+++++....... .+ |+......++| +.+++++|.++ + +.+.+|++++..
T Consensus 2 ~~~~~~~~~~p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~----~~la~~~g~~~----~-~v~~~g~~a~~~ 64 (333)
T PRK10534 2 IDLRSDTVTRPSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQ----DYAAELSGKEA----A-LFLPTGTQANLV 64 (333)
T ss_pred cccccccCCCCCHHHHHHHHhccCCC-------cc-cCCCHHHHHHH----HHHHHHhCCCe----E-EEeCchHHHHHH
Confidence 455555654 6899999986533221 12 22223344555 56788899876 3 456788889999
Q ss_pred HHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-----CCcEEEE
Q 012104 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIIC 187 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-----~pklIi~ 187 (471)
++.+++.|||+|++..|.|...+..+ .....+ ..+.+.++++ +++.+|+++|++++.+. ++++|++
T Consensus 65 ~l~~~~~~gd~vi~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l 135 (333)
T PRK10534 65 ALLSHCERGEEYIVGQAAHNYLYEAG-------GAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSL 135 (333)
T ss_pred HHHHhcCCCCeeEEechhhhhHhcCC-------chHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEE
Confidence 99999999999998876653211100 011111 1344455555 46899999999988542 5788876
Q ss_pred cCCCCCccccHHHHH---HHHHHhCCEEEEeccccchhh-ccccCCCCC-CCccEEEeCCCCcCCCCCeEEEEeeCCCCC
Q 012104 188 GGSAYPRDWDYARFR---AVADKCGALLLCDMAHISGLV-AAQEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 188 ~~s~~g~~~d~~~i~---~ia~~~g~~livD~a~~~glv-~~g~~~~p~-~~aDiv~~s~~K~l~GprgG~i~~~~~~~~ 262 (471)
+++++|..++.++|. ++|+++|++|++|++|..+.. ..+.....+ .+.|.++.|+||.+..+.||++++++
T Consensus 136 ~np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~---- 211 (333)
T PRK10534 136 ENTHNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR---- 211 (333)
T ss_pred ecCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH----
Confidence 656679998887664 678889999999999863311 101111111 24576667899987666666787766
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTE 342 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~ 342 (471)
++.+.+.....+.. ++...... +.+.++..+ . ...++.++..++++++.+.|++.|+++.. +.
T Consensus 212 -----------~~i~~~~~~~~~~~-~~~~~~~~-~~a~~~~~l-~-~~~~~~~~~~~~r~~l~~~L~~~g~~~~~--~~ 274 (333)
T PRK10534 212 -----------DYIKRARRWRKMTG-GGMRQAGI-LAAAGLYAL-K-HNVARLQEDHDNAAWLAEQLREAGADVMR--QD 274 (333)
T ss_pred -----------HHHHHHHHHHHHhC-CchhhHHH-HHHHHHHHH-H-hhHHHHHHHHHHHHHHHHHHHhCCCccCC--CC
Confidence 45555554332221 11111111 111122211 1 22344555666788999999999998753 25
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
++++++++.. .+..++.+.|.++||.+.++ ..+|+.... | .++++++++.+.|.+.+
T Consensus 275 ~nfv~~~~~~--~~~~~~~~~l~~~gi~v~~~-----------~~~rl~~~~---r-~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 275 TNMLFVRVGE--EQAAALGEYMRERNVLINAS-----------PIVRLVTHL---D-VSREQLAEVVAHWRAFL 331 (333)
T ss_pred ceEEEEECCc--hhHHHHHHHHHHcCeeecCC-----------ceEEEEEEe---C-CCHHHHHHHHHHHHHHh
Confidence 6788888753 24567889999999999653 258887621 1 35899999999987654
No 157
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=198.20 Aligned_cols=342 Identities=15% Similarity=0.118 Sum_probs=215.2
Q ss_pred CeeEecCCCCCcHH-HHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 33 GIELIASENFTSFA-VIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 33 ~i~li~s~n~~s~~-v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
.+.|++++..++|. |++++..... +. ..| +.++.+.++ .+++.++++||++.. +.+.+.+.|||.++.
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~-----~~-~hr---~~~f~~~~~-~~r~~l~~l~~~~~~-~~v~~~~gs~T~~~~ 81 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALL-----GR-SHR---QKPVKALLK-RVIEGTRELLSLPEG-YEVGIVPGSDTGAWE 81 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhc-----cc-CcC---CHHHHHHHH-HHHHHHHHHhCCCCC-ceEEEECCchHHHHH
Confidence 45788899888888 9999975432 11 122 235666665 478899999998532 114334458999999
Q ss_pred HHHHHhcCC-CCEEEEeCCCCCCcccccccccCCccc-eeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-
Q 012104 112 AAYTAVLEP-HDRIMGLDLPSGGHLTHGYYTSGGKKI-SATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG- 188 (471)
Q Consensus 112 ~~~~all~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~-~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~- 188 (471)
+++.+++++ ++.|+. +-.|+.. +. ..+ ...|. .++..++.+ .++.+|+++++. +++|.+.
T Consensus 82 ~~~~~l~~~~~~~vi~-~g~f~~~----~~----~~~~~~~g~-~~v~~~~~~-~g~~~d~~~i~~------~~~V~~~h 144 (378)
T PRK03080 82 MALWSLLGARRVDHLA-WESFGSK----WA----TDVVKQLKL-EDPRVLEAD-YGSLPDLSAVDF------DRDVVFTW 144 (378)
T ss_pred HHHHhcCCCCcceEEE-eCHHHHH----HH----HHHHhhcCC-CCceEeccC-CCCCCCHhhcCC------CCCEEEEe
Confidence 999999885 455554 4343321 10 001 12233 033333333 446788777432 4555543
Q ss_pred -CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCC----C
Q 012104 189 -GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPK----P 262 (471)
Q Consensus 189 -~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~----~ 262 (471)
.+.+|...|+++|.+ +++|+++++|++|++|. .|..+..+|++++|.||||.||.| |++..+++.. +
T Consensus 145 ~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~-----~pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p 217 (378)
T PRK03080 145 NGTTTGVRVPVARWIG--ADREGLTICDATSAAFA-----LPLDWSKLDVYTFSWQKVLGGEGGHGMAILSPRAVERLES 217 (378)
T ss_pred cCCccceeccchhhcc--ccCCCeEEEeccccccc-----CCCCHHHCcEEEEehhhhCCCCCceEEEEECHHHHHhhhc
Confidence 667899999999988 78999999999998774 344444689999999999999887 8888776431 1
Q ss_pred CCCCCCCCcccchHh---hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCC-ceEe
Q 012104 263 PKKGQPEGAVYDFED---KINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-YSLV 337 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~---~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g-~~i~ 337 (471)
...++....++++.. .+....-.+..++|....+.++..+++.+.+. ++++..++..+.++++.+.|++.+ +.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~ 297 (378)
T PRK03080 218 YTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPL 297 (378)
T ss_pred ccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 111111000111111 11111112334567777888888899988776 688888999999999999999885 5664
Q ss_pred eC-CC--CCeeEEEEccCC--CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 338 TG-GT--ENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 338 ~~-~~--~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
.. +. ...++.+.+... +.+.+ +...|.+.||.+..+... . ..+.+|+|+...++ ++|++++.++|
T Consensus 298 ~~~~~~~s~~i~~~~~~~~~~~~~~~-~~~~l~~~~i~v~~g~~~----~-~~~~vRis~~~~~t----~~di~~l~~al 367 (378)
T PRK03080 298 VADPATRSNTSVTLDFVDAQAAVDAA-AVAKLLRENGAVDIEPYR----D-APNGLRIWCGPTVE----PADVEALTPWL 367 (378)
T ss_pred cCCccccCccEEEEEcCCchHHHHHH-HHHHHHHcCCeecccccc----C-CCCcEEEecCCCCC----HHHHHHHHHHH
Confidence 32 11 112344444320 23333 444455568887654211 1 24689999866654 89999999999
Q ss_pred HHHHHHH
Q 012104 413 HRAVTLT 419 (471)
Q Consensus 413 ~~~l~~~ 419 (471)
++++...
T Consensus 368 ~~~~~~~ 374 (378)
T PRK03080 368 DWAFERL 374 (378)
T ss_pred HHHHHHH
Confidence 9876643
No 158
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.3e-20 Score=189.94 Aligned_cols=336 Identities=17% Similarity=0.120 Sum_probs=206.1
Q ss_pred CCeeEecCCC-C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC--CCCCCceeee-cCCh
Q 012104 32 RGIELIASEN-F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL--DPTQWGVNVQ-PYSG 106 (471)
Q Consensus 32 ~~i~li~s~n-~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~--~~~~~~~~v~-~~sG 106 (471)
+.++|..+.. . .++.+.+++...+..... . ...|+.......+.+...+++.+.++. +++ +|. +.++
T Consensus 34 ~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~-~---~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~ 105 (394)
T PRK06836 34 NVFDFSLGNPSVPPPAAVKEALRELAEEEDP-G---LHGYMPNAGYPEVREAIAESLNRRFGTPLTAD----HIVMTCGA 105 (394)
T ss_pred CeEEecCcCCCCCCCHHHHHHHHHHHhcCCc-C---cccCCCCCCCHHHHHHHHHHHHHHhCCCCCcC----cEEEeCCh
Confidence 3467754443 2 367888888766543211 0 011222223334443333444444433 332 343 4455
Q ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE
Q 012104 107 SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII 186 (471)
Q Consensus 107 t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi 186 (471)
++++..++.++++|||.|++.+|.|.++.. .....| .+++.++++++++.+|++++++++. .++++|+
T Consensus 106 ~~al~~~~~~l~~~gd~Vli~~p~~~~~~~---------~~~~~g--~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~ 173 (394)
T PRK06836 106 AGALNVALKAILNPGDEVIVFAPYFVEYRF---------YVDNHG--GKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVI 173 (394)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCCCccHHH---------HHHHcC--CEEEEEecCCccCcCCHHHHHhhcC-cCceEEE
Confidence 679999999999999999999998877542 112233 4666667676667899999999986 4788887
Q ss_pred Ec--CCCCCccccHH---HHHHHHHH------hCCEEEEeccccchhhccccC-CCCCCC--ccEEEeCCCCcC--CCCC
Q 012104 187 CG--GSAYPRDWDYA---RFRAVADK------CGALLLCDMAHISGLVAAQEA-ANPFEY--CHIVTTTTHKSL--RGPR 250 (471)
Q Consensus 187 ~~--~s~~g~~~d~~---~i~~ia~~------~g~~livD~a~~~glv~~g~~-~~p~~~--aDiv~~s~~K~l--~Gpr 250 (471)
++ +||+|..+|.+ +|.++|++ +|+++++|++|. .+.+.+.. +..+.. -.++++|++|++ +|.|
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlR 252 (394)
T PRK06836 174 INSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYR-EIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGER 252 (394)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccc-ccccCCCCCCChHHccCcEEEEecchhhccCccee
Confidence 54 78999998865 55567888 899999999997 66654422 221222 248899999985 6889
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
.||+++++.+... . .+...+.... ..+....+.. ...+++..+.. .. ..+.+.++.+.+.+.|
T Consensus 253 iG~~~~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~l~~----~~--~~~~~~~~r~~l~~~L 316 (394)
T PRK06836 253 IGYIAVNPEMEDA-------D--DLVAALVFANRILGFVNAPAL-MQRVVAKCLDA----TV--DVSIYKRNRDLLYDGL 316 (394)
T ss_pred eEEEecCHHHhhh-------H--HHHHHHHHHhhccccccCCHH-HHHHHHHHhCC----hH--HHHHHHHHHHHHHHHH
Confidence 9999987632000 0 0111111110 0011112222 22222222321 11 2345566778888888
Q ss_pred HcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 330 TGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 330 ~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
++.|+.+. .+.+++++|+.+.. .+..++.+.|.+.||.+.++..++ .++++||++. ..++++++..
T Consensus 317 ~~~g~~~~-~~~gg~~~~~~~~~--~~~~~~~~~l~~~gv~v~~g~~f~-----~~~~iRi~~~------~~~~~~~~~i 382 (394)
T PRK06836 317 TELGFECV-KPQGAFYLFPKSPE--EDDVAFCEKAKKHNLLLVPGSGFG-----CPGYFRLSYC------VDTETIERSL 382 (394)
T ss_pred HhCCCEee-cCCceEEEEEeCCC--CCHHHHHHHHHhCCEEEECchhcC-----CCCeEEEEec------CCHHHHHHHH
Confidence 88888764 34557778887653 367778888899999998875443 2478999983 2367777777
Q ss_pred HHHHHHHHH
Q 012104 410 EFLHRAVTL 418 (471)
Q Consensus 410 ~~i~~~l~~ 418 (471)
+.|.++++.
T Consensus 383 ~~l~~~l~~ 391 (394)
T PRK06836 383 PAFEKLAKE 391 (394)
T ss_pred HHHHHHHHH
Confidence 777776654
No 159
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=1e-20 Score=190.76 Aligned_cols=321 Identities=16% Similarity=0.117 Sum_probs=202.4
Q ss_pred EecCCCCC----cHHHHHHHhhhhhccC------CCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecC
Q 012104 36 LIASENFT----SFAVIEALGSALTNKY------SEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPY 104 (471)
Q Consensus 36 li~s~n~~----s~~v~~a~~~~l~~~~------~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~ 104 (471)
..+|.+|+ +|.+.++....+.... ..|..|+|...|. +.++++| +.+++++|++. + +.++
T Consensus 8 ~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e----~~la~~~~~~~----~-l~~~ 78 (370)
T PRK05937 8 DFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLE----HKIAHFHGAPE----A-FIVP 78 (370)
T ss_pred EeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCe----E-EEEC
Confidence 34578886 5666666655553321 2445566654443 3444444 78899999975 3 6678
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC----
Q 012104 105 SGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---- 180 (471)
Q Consensus 105 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~---- 180 (471)
||+.||..++..+.++||.|+.....|+..+. + +.... . ..+.+ ..+|+++++++++..
T Consensus 79 sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~-~--------~~~~~-~-~~~~~------~~~d~~~l~~~l~~~~~~~ 141 (370)
T PRK05937 79 SGYMANLGLCAHLSSVTDYVLWDEQVHISVVY-S--------LSVIS-G-WHQSF------RHNDLDHLESLLESCRQRS 141 (370)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHH-H--------HHHcC-C-ceEEe------cCCCHHHHHHHHHhhhccC
Confidence 99999988777777889999988877654332 1 11111 1 11223 357999999988742
Q ss_pred -CCcEEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC----CCCCCCccEEEeCCCCcCCCCCeEE
Q 012104 181 -RPKLII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA----ANPFEYCHIVTTTTHKSLRGPRAGM 253 (471)
Q Consensus 181 -~pklIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~----~~p~~~aDiv~~s~~K~l~GprgG~ 253 (471)
++.+|+ ++ +|++|...|+++|+++|+++|+++++|++|+.|.+..... ...+...++++.|++|.+ ||.|+.
T Consensus 142 ~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~ 220 (370)
T PRK05937 142 FGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAA 220 (370)
T ss_pred CCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceE
Confidence 233554 34 6789999999999999999999999999999775432110 011122346788999976 778877
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCC-CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+++.+ +....+.....|. ..++.+...++++..+++.+...+ ....+++.++.+++.+.|...
T Consensus 221 vl~~~---------------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~ 284 (370)
T PRK05937 221 LLSSS---------------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA 284 (370)
T ss_pred EEcCH---------------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC
Confidence 77765 2222222111121 223345556677777776654322 345566677777777766432
Q ss_pred CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+. . +...+.+. +.+..++.+.|.+.||.++....| ..+.+|++++..++ ++|++++.+.|
T Consensus 285 ~~------~--~~~~i~~~--~~~~~~~~~~L~~~gi~v~~~~~~------~~~~iRis~~~~~t----~edid~l~~~L 344 (370)
T PRK05937 285 AP------G--CVQPIFLP--GISEQELYSKLVETGIRVGVVCFP------TGPFLRVNLHAFNT----EDEVDILVSVL 344 (370)
T ss_pred CC------C--CEEEEEeC--ChhHHHHHHHHHHCCeeEEeeCCC------CCCEEEEEcCCCCC----HHHHHHHHHHH
Confidence 11 1 11112232 335677888999999998743222 13579999977665 89999999999
Q ss_pred HHHHHHH
Q 012104 413 HRAVTLT 419 (471)
Q Consensus 413 ~~~l~~~ 419 (471)
.++++..
T Consensus 345 ~~~~~~~ 351 (370)
T PRK05937 345 ATYLEKY 351 (370)
T ss_pred HHHHHHh
Confidence 9887653
No 160
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.89 E-value=7.7e-21 Score=189.64 Aligned_cols=300 Identities=19% Similarity=0.176 Sum_probs=199.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
....++++...+.+...++...... ..+.+++|+.|+..++.++.++||+|+++++.|.++.. .+...+
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~---------~~~~~~- 104 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA---------AARLAG- 104 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH---------HHHHCC-
Confidence 3445666555555555554211111 23446677889999999999999999999988877642 122333
Q ss_pred eeEEEeeeecCCCCCCCH--HHHHHHhhhCCCcEEEEc--CCCCCccccHHHHH---HHHHHhCCEEEEeccccchhhcc
Q 012104 153 YFESLPYKVNSSTGYIDY--DKLEEKALDFRPKLIICG--GSAYPRDWDYARFR---AVADKCGALLLCDMAHISGLVAA 225 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~--~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~---~ia~~~g~~livD~a~~~glv~~ 225 (471)
.+++.++.+. ++..+. +.++.... .++++|++. .+++|...|.+++. ++|+++|+++++|++|. ++...
T Consensus 105 -~~~~~i~~~~-~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~-~~~~~ 180 (350)
T cd00609 105 -AEVVPVPLDE-EGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYA-ELVYD 180 (350)
T ss_pred -CEEEEEeccc-ccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchh-hceeC
Confidence 3445555553 344444 55555543 578888754 67889999876665 89999999999999997 43333
Q ss_pred ccCCC---CC-C-CccEEEeCCCCcC--CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHH
Q 012104 226 QEAAN---PF-E-YCHIVTTTTHKSL--RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGA 298 (471)
Q Consensus 226 g~~~~---p~-~-~aDiv~~s~~K~l--~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa 298 (471)
+..+. .. . ++|++++|+||++ +|++.|+++++++ ++.+.+..... ...++++...+.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~~~ 245 (350)
T cd00609 181 GEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE--------------ELLERLKKLLP-YTTSGPSTLSQAA 245 (350)
T ss_pred CcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH--------------HHHHHHHHHHH-hcccCCChHHHHH
Confidence 33221 11 1 5789999999997 4678899998873 34544443322 2234555666666
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCC
Q 012104 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 299 ~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
+..+++... .++++..+++.++++++.+.|.+.+......+...+++++.+.. ..+.+.+.++|.+.||.+.+...+.
T Consensus 246 ~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~ 323 (350)
T cd00609 246 AAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPE-GDDEEFLERLLLEAGVVVRPGSAFG 323 (350)
T ss_pred HHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCC-CChHHHHHHHHHhCCEEEecccccc
Confidence 666666543 46778888899999999999998865432233455677777653 2356678899999999998764332
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
. ..+.++||++... .+|++++.+.|+
T Consensus 324 ~---~~~~~iRi~~~~~------~~~i~~~~~al~ 349 (350)
T cd00609 324 E---GGEGFVRLSFATP------EEELEEALERLA 349 (350)
T ss_pred c---CCCCeEEEEeeCC------HHHHHHHHHHhh
Confidence 1 2457999998432 689999988875
No 161
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=1.3e-20 Score=193.64 Aligned_cols=345 Identities=16% Similarity=0.129 Sum_probs=210.6
Q ss_pred CeeEecCCCCCcH-HHHHHHhhhhhc-----cCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC----CCCCCCceeee
Q 012104 33 GIELIASENFTSF-AVIEALGSALTN-----KYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH----LDPTQWGVNVQ 102 (471)
Q Consensus 33 ~i~li~s~n~~s~-~v~~a~~~~l~~-----~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg----~~~~~~~~~v~ 102 (471)
.|+|--.||.+.. .+.+.+.+...- .+.....+.-+|.+......+.+...+.+.+.+| ++++ +|.
T Consensus 49 ~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~----~Iv 124 (447)
T PLN02607 49 VIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPD----RIV 124 (447)
T ss_pred eEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHH----HeE
Confidence 6899999998754 444444432210 0000001112344333344454444466666665 3332 454
Q ss_pred cCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccce-eccceeEEEeeeecCC-CCCCCHHHHHHHhhh
Q 012104 103 PYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNSS-TGYIDYDKLEEKALD 179 (471)
Q Consensus 103 ~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~-~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~ 179 (471)
.++| ++|+..++.+++.|||.|+++.|.|+++... +. ..| .++++++.+++ ++.+|++.+++++.+
T Consensus 125 it~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~---------~~~~~g--~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 125 LTAGATAANELLTFILADPGDALLVPTPYYPGFDRD---------LRWRTG--VKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred EcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHH---------HHhcCC--cEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 5565 5789999999999999999999999887421 11 123 45566666543 357999999998764
Q ss_pred -----CCCcEEE-Ec-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhcccc-CCCCC------C--C-cc--E
Q 012104 180 -----FRPKLII-CG-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQE-AANPF------E--Y-CH--I 237 (471)
Q Consensus 180 -----~~pklIi-~~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~------~--~-aD--i 237 (471)
.++|+|+ ++ +||+|.+++. ++|.++|+++|++||+|++|. ++++.+. .++.. + . .+ +
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa-~~~f~~~~f~S~~s~~~~~~~~~~~~~v~ 272 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYS-GSVFSASEFVSVAEIVEARGYKGVAERVH 272 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccc-ccccCCCCcccHHHHHhhcCCCCCcCcEE
Confidence 4677665 55 7899999985 466678999999999999997 5454432 22111 1 1 12 6
Q ss_pred EEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHh--ccHHHHH
Q 012104 238 VTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA--STPAFKA 313 (471)
Q Consensus 238 v~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~--~~~~~~~ 313 (471)
++.|++|. ++|.|.|++++.++ .+...+....... .++.....+++..|..- ....+.+
T Consensus 273 vi~s~SK~fg~~GlRvG~ivs~n~--------------~l~~~~~~~~~~~---~~s~~~q~~~~~~L~d~~~~~~~l~~ 335 (447)
T PLN02607 273 IVYSLSKDLGLPGFRVGTIYSYND--------------KVVTTARRMSSFT---LVSSQTQHLLASMLSDEEFTENYIRT 335 (447)
T ss_pred EEEcchhcCCCCcceEEEEEEcCH--------------HHHHHHHHHhhcC---CCCHHHHHHHHHHhCCchhHHHHHHH
Confidence 78899998 48899999998542 4444443321111 11111222222233221 1112244
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC---C-CC-HHHH-HHHHhhcCeEeccCCcCCCCCCCCCCe
Q 012104 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL---G-LT-GNKV-EKLCDLCNITVNKNAVFGDSSALAPGG 387 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~---~-~~-~~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~ 387 (471)
..+++.++.+.+.+.|++.|+.+. .+.++.++|++++.. . .+ ..++ .++++++||.+.++..++.. .+++
T Consensus 336 ~r~~l~~~~~~~~~~L~~~gi~~~-~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~---~~g~ 411 (447)
T PLN02607 336 NRERLRKRYEMIVQGLRRAGIECL-KGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCS---EPGW 411 (447)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-cCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCC---CCCE
Confidence 556667778889999998888764 345678899998531 1 11 2234 45667789999988765422 3589
Q ss_pred eEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 388 VRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 388 iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
+||++... .++++++..+.|.+++...
T Consensus 412 fRi~fa~~-----~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 412 FRVCFANM-----SEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred EEEEeccC-----CHHHHHHHHHHHHHHHHHH
Confidence 99998432 3567777777776666543
No 162
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.89 E-value=2.7e-21 Score=199.78 Aligned_cols=349 Identities=15% Similarity=0.163 Sum_probs=206.0
Q ss_pred CCeeEecCC-CCC-cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC--CC-CCceeeecCC-
Q 012104 32 RGIELIASE-NFT-SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PT-QWGVNVQPYS- 105 (471)
Q Consensus 32 ~~i~li~s~-n~~-s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~--~~-~~~~~v~~~s- 105 (471)
+.|+|..++ ++. ++.+.++......+. ||... | .....|..+.....+.++.. .. + .+|..++
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~~~~----Y~~~~---g--~~~lreaia~~~~~~~~~~~~~~~~~--~~I~vT~G 169 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGIIGDN----YPVPD---R--MLKHTEKIVKDYLRQEMCGGRPPKGE--FDLFAVEG 169 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHhcCC----CCCCC---C--CHHHHHHHHHHHHHhhccCCCCCCCc--CeEEEeCC
Confidence 456776666 443 456666554443322 33321 1 12233444444444433321 11 1 1455455
Q ss_pred hHHHHHHHHHH-----hcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhh
Q 012104 106 GSPANFAAYTA-----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALD 179 (471)
Q Consensus 106 Gt~A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~ 179 (471)
+++|+..++.+ +++|||+|++++|.|..+.. .+...|...++++++.++ +++.+|.+++++++.
T Consensus 170 a~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~---------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~- 239 (527)
T PRK09275 170 GTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLE---------IPELPRYDLEVVHINADEENEWQYPDSELEKLRD- 239 (527)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHH---------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-
Confidence 45788888876 68999999999999987642 122344455666776554 358899999999775
Q ss_pred CCCcEEEE-c-CCCCCccccHH---HHHHHHHH--hCCEEEEeccccchhhccccCCCCCC---CccEEEeCCCCc--CC
Q 012104 180 FRPKLIIC-G-GSAYPRDWDYA---RFRAVADK--CGALLLCDMAHISGLVAAQEAANPFE---YCHIVTTTTHKS--LR 247 (471)
Q Consensus 180 ~~pklIi~-~-~s~~g~~~d~~---~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~---~aDiv~~s~~K~--l~ 247 (471)
.++|+|++ + +||+|..++.+ +|+++|++ +|++||+|++|. .+.. .+.+.+. .--|++.|++|+ ++
T Consensus 240 ~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~s~~~~~~~~~I~v~SfSK~f~mt 316 (527)
T PRK09275 240 PSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD--DFRSLFAVLPYNTILVYSFSKYFGAT 316 (527)
T ss_pred CCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc--cccCHHHhCCCCEEEEeehhhhccCc
Confidence 57898874 4 78999999854 55677854 499999999997 4443 2222222 123889999999 58
Q ss_pred CCCeEEEEeeCC-----CC-CCC---------------CCCCCCcccchHhhh----hhcCCCCCCCCCcHHHHH-H---
Q 012104 248 GPRAGMIFYRKG-----PK-PPK---------------KGQPEGAVYDFEDKI----NFAVFPSLQGGPHNHQIG-A--- 298 (471)
Q Consensus 248 GprgG~i~~~~~-----~~-~~~---------------~~~~~i~~~~l~~~i----~~~~~~~~~g~p~~~~ia-a--- 298 (471)
|+|.||++++++ +. ... ..-..+ .+.+++ .........|.+...+.+ +
T Consensus 317 G~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~---~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~ 393 (527)
T PRK09275 317 GWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKL---KFIDRLVADSRQVALNHTAGLSTPQQVQMALFS 393 (527)
T ss_pred HhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchh---hhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Confidence 999999998874 00 000 000000 111111 111011112333334443 3
Q ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe-eCCCCCeeEEEEccCCC---------------CCHHHH-H
Q 012104 299 LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV-TGGTENHLVLWDLRPLG---------------LTGNKV-E 361 (471)
Q Consensus 299 ~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~-~~~~~~~~~~v~~~~~~---------------~~~~~~-~ 361 (471)
+..++.. .....++..+.+.++.+.+.+.| |+.+. ..+.+.+++|+|+...+ .+..++ .
T Consensus 394 ~~all~~-~~~~~~~~~~~~~~Rr~~l~~~L---g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~ 469 (527)
T PRK09275 394 LFALLDE-EDAYKKAMKDIIRRRYKALYEGL---GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLF 469 (527)
T ss_pred HHHHHhC-chHHHHHHHHHHHHHHHHHHHHc---CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHH
Confidence 2222332 22233555566666666676666 44432 23456788899875321 244454 6
Q ss_pred HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 012104 362 KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL 420 (471)
Q Consensus 362 ~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~ 420 (471)
+++++.||.+.+++.++.. .+++||++.. ..++++.++++.|.+++....
T Consensus 470 ~Ll~e~gV~v~PG~~Fg~~----~~~vRis~a~-----~~~~~~~~~~~rl~~~l~~y~ 519 (527)
T PRK09275 470 RLAEETGVVLLPGGGFGGP----EWSVRVSLAN-----LNEEDYAKIGKAIRKLLDEYY 519 (527)
T ss_pred HHHhcCCEEEeCchhhCCC----CCeEEEEEec-----CCHHHHHHHHHHHHHHHHHHH
Confidence 7788999999988877632 4689999832 347888888888888876543
No 163
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.89 E-value=1.7e-20 Score=191.39 Aligned_cols=342 Identities=15% Similarity=0.119 Sum_probs=196.4
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..+++. +++.|.+++.+.+.+...+ ...+.|+.......+.+.+.++..+ .+++.+ +|..++|+
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~-~~~~~d----~I~it~Ga~ 105 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYR-GRIDPE----EIFISDGAK 105 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHh-cCCCHH----HEEECCCcH
Confidence 356888777764 4788899888776542110 0001121111122333222222111 145553 45566776
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc---------eeEEEeeeecCC-CCCCCHHHHHHHh
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI---------YFESLPYKVNSS-TGYIDYDKLEEKA 177 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~---------~~~~~~~~v~~~-~~~iD~~~le~~~ 177 (471)
+|+.. +..++.|||+|++.+|+|.++... +...|. +.++++++.+++ ++.+|+++
T Consensus 106 ~al~~-l~~l~~~gd~Vlv~~P~y~~~~~~---------~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 106 CDVFR-LQSLFGSDNTVAVQDPVYPAYVDS---------NVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE----- 170 (402)
T ss_pred HHHHH-HHHhcCCCCEEEEeCCCCcchHHH---------HHHcCCccccccccccceEEEeecchhhCCCCCccc-----
Confidence 56665 456779999999999999876421 122232 014555555432 34444321
Q ss_pred hhCCCcEEEE-c-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CC-cc--EEEeCCCCcC
Q 012104 178 LDFRPKLIIC-G-GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EY-CH--IVTTTTHKSL 246 (471)
Q Consensus 178 ~~~~pklIi~-~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~-aD--iv~~s~~K~l 246 (471)
..++|+|++ + +||+|..++ +++|.++|+++|++||+|++|. .+...+..+.++ +. .+ |++.|++|.+
T Consensus 171 -~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYS-AFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhh-hhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 146888774 4 789999998 5667788899999999999997 665544323332 22 12 6789999985
Q ss_pred --CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 012104 247 --RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVA 324 (471)
Q Consensus 247 --~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~ 324 (471)
+|.|.||+++++++.... .. ...+.+.........+.+...+. +...++..-....+++..+.+.++.+.
T Consensus 249 g~pGlRiG~~i~~~~l~~~~-----~~--~~~~~~~~~~~~~~~~~s~~~q~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 320 (402)
T TIGR03542 249 GFTGVRLGWTVVPKELTYAD-----GH--SVIQDWERRQCTKFNGASYPVQR-AAEAAYAGEGLQPILEAISYYMENARI 320 (402)
T ss_pred CCCCcceEEEEecHHHhhcc-----hh--hHHHHHHHHhhhcccCCCHHHHH-HHHHHHcCcchhHHHHHHHHHHHHHHH
Confidence 889999999987420000 00 00122211111111111122222 222233321112344556667788888
Q ss_pred HHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHH-HHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHH
Q 012104 325 LGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEK-LCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEK 403 (471)
Q Consensus 325 l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~-~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~ 403 (471)
+.+.|++.|+++. ++.++.++|+++.. +++..++.+ ++++.||.+.++..++. ...+++||++. . .++
T Consensus 321 ~~~~L~~~~~~~~-~~~~~~f~~v~l~~-~~~~~~l~~~l~~~~gv~v~pg~~f~~---~~~~~iRis~~--~----~~~ 389 (402)
T TIGR03542 321 LRKALEAAGFKVY-GGEHAPYLWVKTPE-GISSWDFFDFLLYQYHVVGTPGSGFGP---SGEGFVRFSAF--G----KRE 389 (402)
T ss_pred HHHHHHhcCceec-CCCceeEEEEECCC-CCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEec--C----CHH
Confidence 9999988888764 44567788999854 566667654 45678999998765532 12479999962 1 356
Q ss_pred HHHHHHHHHHHH
Q 012104 404 DFEQIGEFLHRA 415 (471)
Q Consensus 404 d~~~l~~~i~~~ 415 (471)
++++..+.|.++
T Consensus 390 ~l~~~l~~l~~~ 401 (402)
T TIGR03542 390 NIVEACERIKEA 401 (402)
T ss_pred HHHHHHHHHHhh
Confidence 777766666543
No 164
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.89 E-value=2.7e-21 Score=193.80 Aligned_cols=340 Identities=10% Similarity=0.014 Sum_probs=217.1
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHH
Q 012104 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAA 113 (471)
Q Consensus 34 i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~ 113 (471)
..++|++..++++|++++...... .. +++.| +.++.+.+++ +++++++++|++.+ +.+.+.+.|||.++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~-~~--~~~hr---~~~f~~~~~~-~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAAS-LF--GTSHR---QAPVKNLVGR-VREGLAELFSLPDG-YEVILGNGGATAFWDAA 76 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcc-cc--ccCcC---ChHHHHHHHH-HHHHHHHHhCCCCC-ceEEEECCchhHHHHHH
Confidence 468899999999999998632100 00 12233 3466777764 68999999998543 22434456789999999
Q ss_pred HHHhcCCCCEEEEeCCCCCCcccccccccCCccceec--cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--C
Q 012104 114 YTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT--SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--G 189 (471)
Q Consensus 114 ~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~--g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~ 189 (471)
+.+++.+ +.+.+..-.|+.-+.|. .+.. ...+..+ +++ .+..++.+ + ..++|+|.+. .
T Consensus 77 ~~~l~~~-~~l~i~~G~~~~~~~~~--------a~~~~~~~~~~~~--~~~-~~~~~~~~-----~-~~~~~lV~~~h~e 138 (361)
T TIGR01366 77 TFGLIEK-KSLHLSFGEFSSKFAKA--------VKLAPWLGEPIIV--TAD-PGSAPEPQ-----A-DPGVDVIAWAHNE 138 (361)
T ss_pred HHhcccc-cccEEecCHHHHHHHHH--------HHhhhccCCceEE--ecC-CCCCCCCc-----c-CCCCCEEEEcccC
Confidence 9999743 22222232222211111 1111 1122333 333 23444432 2 2478988765 5
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCeE-EEEeeCCC----CCCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRAG-MIFYRKGP----KPPK 264 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~GprgG-~i~~~~~~----~~~~ 264 (471)
|.+|...|+++| ++++|+++++|+++++|. .|..++.+|++++|.||++.+|.|. +++.+++. ++..
T Consensus 139 t~tG~~~pi~~I---~~~~g~~~iVDavqs~g~-----~~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~ 210 (361)
T TIGR01366 139 TSTGVAVPVRRP---EGSDDALVVIDATSGAGG-----LPVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIA 210 (361)
T ss_pred Cccceecccccc---cccCCCeEEEEcCccccC-----CCCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhccc
Confidence 678999998876 688999999999998763 3444446899999999998777553 33344432 2222
Q ss_pred CCCCCCcc-cchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCC-ceEeeCCC
Q 012104 265 KGQPEGAV-YDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-YSLVTGGT 341 (471)
Q Consensus 265 ~~~~~i~~-~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g-~~i~~~~~ 341 (471)
.++..+.+ .++........-.+..++|....+.++..+++.+.+. +++...++..+.++++++.|.+.+ ++++..+.
T Consensus 211 ~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 290 (361)
T TIGR01366 211 ASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDP 290 (361)
T ss_pred CCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 22322221 1333222222113456788888888999999988766 478888899999999999999987 55543211
Q ss_pred --CC-eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 342 --EN-HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 342 --~~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+ ....+.+ +.+++..++...|+++||.+.++. .....+.+|||+...++ ++|++++.++|+++++
T Consensus 291 ~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~-----~~l~~~~vRis~~~~~t----~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 291 GKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPY-----RKLGRNQLRVAMFPAID----PDDVEALTECVDWVVE 359 (361)
T ss_pred hhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCc-----cccCCCcEEEEcCCCCC----HHHHHHHHHHHHHHHh
Confidence 11 1234566 467899999999999999986542 11234679999966554 8999999999998764
No 165
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.89 E-value=4.4e-21 Score=182.31 Aligned_cols=335 Identities=16% Similarity=0.157 Sum_probs=240.4
Q ss_pred CCeeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
..+..+.|.+|+ .|.|++|+...+ ++|..|-.|.|...|. .+.-.+| ..+++|.+-+. .+.++|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl-~~hG~GAGGTRNIsG~s~~hv~LE----~eLA~LHqK~a-----ALlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTL-DRHGAGAGGTRNISGHSKHHVRLE----AELADLHQKEA-----ALLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHH-HHcCCCcCCccccCCCCchhhhHH----HHHHHHhcCcc-----eeeeeee
Confidence 456778888886 699999998887 5566688888877776 4555677 46888988775 3557788
Q ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC---C
Q 012104 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF---R 181 (471)
Q Consensus 107 t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~---~ 181 (471)
.-||...+..| .-||-+|......|.+.+ . -+.-++. .-+-+ .+.|+++|+++++.. .
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHASMI------~---GIrns~v--~K~IF------rHND~~hL~~lL~~~~~sv 303 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHASMI------Q---GIRNSRV--PKHIF------RHNDLDHLEQLLQSSPKSV 303 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchHHHH------H---HhhhcCC--cceee------ccCCHHHHHHHHHhCCCCC
Confidence 88999988887 459999998775543221 1 1111221 11112 256999999998753 4
Q ss_pred CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---c--cCCCCCCCccEEEeCCCCcCCCCCeEEE
Q 012104 182 PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---Q--EAANPFEYCHIVTTTTHKSLRGPRAGMI 254 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g--~~~~p~~~aDiv~~s~~K~l~GprgG~i 254 (471)
||+|.+. +|..|.+.|+++|.++|++||++-++|+.|+.|+... | ..+..+...||+++++.|++ |.-||+|
T Consensus 304 PKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYI 382 (570)
T KOG1360|consen 304 PKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYI 382 (570)
T ss_pred CceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-cccccee
Confidence 7888754 8999999999999999999999999999999998653 2 23333456899999999997 6789999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCC-C-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS-L-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~-~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.... .+.+.++... +| + ..+...+.+++...|.+.+..++-...+++.++|.+++++.|.+.
T Consensus 383 Aat~---------------~LvDmiRSyA-aGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~ 446 (570)
T KOG1360|consen 383 AATR---------------KLVDMIRSYA-AGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL 446 (570)
T ss_pred hhhh---------------hHHHHHHHhc-CceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc
Confidence 8876 4666665432 22 1 123334455555557776665556778888899999999999999
Q ss_pred CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
|+.++. .++|++-+.+.+.....+....++.++||+|-..-.|. .+.++..+||..... .+++-|+.+.+.+
T Consensus 447 GiPVi~--~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPT--V~rG~E~LRiaPTP~----HT~~mm~~lv~~l 518 (570)
T KOG1360|consen 447 GIPVIP--NPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPT--VARGTERLRIAPTPH----HTPQMMNILVNAL 518 (570)
T ss_pred CCcccC--CCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCc--ccccceeeecCCCCC----CCHHHHHHHHHHH
Confidence 999974 56898887766544444445777899999987654554 334566899975333 3578888888888
Q ss_pred HHHHHH
Q 012104 413 HRAVTL 418 (471)
Q Consensus 413 ~~~l~~ 418 (471)
..+-+.
T Consensus 519 ~~vw~~ 524 (570)
T KOG1360|consen 519 LDVWNE 524 (570)
T ss_pred HHHHHH
Confidence 776554
No 166
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.89 E-value=1.4e-20 Score=189.37 Aligned_cols=318 Identities=16% Similarity=0.127 Sum_probs=204.8
Q ss_pred cCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-
Q 012104 31 CRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS- 107 (471)
Q Consensus 31 ~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt- 107 (471)
.+.++|..++|. +++.+++++...+.. ..+|+.. . ...+ ++.++++++++.+ +|..++|+
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~------~-~~~L----r~aia~~~~v~~~----~I~it~G~~ 84 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSA--LRHYPDP------D-YREL----RLALAQHHQLPPE----WILPGNGAA 84 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc------C-HHHH----HHHHHHHhCcChh----hEEECCCHH
Confidence 355888878775 467888888765543 1234321 1 1223 3456667788764 45556665
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCC----CCCHHHHHHHhhhCCCc
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTG----YIDYDKLEEKALDFRPK 183 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~----~iD~~~le~~~~~~~pk 183 (471)
+++..++.++. +||+|++.+|+|+++.. .+...|. +++.++++++++ ..|++++++.. .+++
T Consensus 85 ~~i~~~~~~l~-~g~~vlv~~P~y~~~~~---------~~~~~g~--~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~ 150 (360)
T PRK07392 85 ELLTWAGRELA-QLRAVYLITPAFGDYRR---------ALRAFGA--TVKELPLPLDQPSPGLTLRLQTLPPQL--TPND 150 (360)
T ss_pred HHHHHHHHHhC-CCCeEEEECCCcHHHHH---------HHHHcCC--eEEEEecccccCCcccccCHHHHHHhc--cCCC
Confidence 68888888764 78999999999987642 1223443 555555554333 25677766543 3567
Q ss_pred EEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC---CCcc--EEEeCCCCc--CCCCCeEEE
Q 012104 184 LII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF---EYCH--IVTTTTHKS--LRGPRAGMI 254 (471)
Q Consensus 184 lIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~~aD--iv~~s~~K~--l~GprgG~i 254 (471)
+++ ++ +||+|..++.++|.++|+++++ +|+|++|. .+.+.+..++.+ +..+ |++.|++|+ ++|.|.||+
T Consensus 151 ~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~-~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~ 228 (360)
T PRK07392 151 GLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFM-DFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYA 228 (360)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchh-hhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeee
Confidence 666 45 7899999999999999999985 66699986 666544323222 2122 889999999 589999999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHHcC-
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~-~~~~~~~~~na~~l~~~L~~~- 332 (471)
+++. ++.+.+.....+. +++.....++..+++ ...+ +...+.+.++.+.+.+.|++.
T Consensus 229 v~~~---------------~~~~~~~~~~~~~---~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~ 287 (360)
T PRK07392 229 IAHP---------------DRLQRWQQWRDPW---PVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLP 287 (360)
T ss_pred eCCH---------------HHHHHHHhhCCCC---CCCHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9976 4555555433221 222223333333443 2234 334455677788889999876
Q ss_pred CceEeeCCCCCeeEEEEccCCCCCHHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 333 GYSLVTGGTENHLVLWDLRPLGLTGNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~~~~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
|+.+.. .+.+++|+++.. +..++. ++|+++||.+.++..++. ...+++||++.. .++++++.+.
T Consensus 288 ~~~~~~--~~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f~~---~~~~~iRi~~~~-------~~~~~~l~~a 352 (360)
T PRK07392 288 GLTPLP--SAANFLLVQSQG---SALQLQEKLLQQHRILIRDCLSFPE---LGDRYFRVAVRT-------EAENQRLLEA 352 (360)
T ss_pred CcEECC--CCCCEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCCCC---CCCCEEEEEeCC-------HHHHHHHHHH
Confidence 777643 445677888753 456665 456889999998765532 134799999732 5678899988
Q ss_pred HHHHHH
Q 012104 412 LHRAVT 417 (471)
Q Consensus 412 i~~~l~ 417 (471)
+++++.
T Consensus 353 l~~~~~ 358 (360)
T PRK07392 353 LAAILA 358 (360)
T ss_pred HHHHhh
Confidence 887765
No 167
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=9.9e-22 Score=196.39 Aligned_cols=281 Identities=16% Similarity=0.103 Sum_probs=192.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCC-CCCCceeeecCChHHHHHHHHHHhcC------------CC--CEEEEeCCCCCCcccc
Q 012104 73 EFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSGSPANFAAYTAVLE------------PH--DRIMGLDLPSGGHLTH 137 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~-~~~~~~~v~~~sGt~A~~~~~~all~------------pG--D~Vl~~~~~~~g~~s~ 137 (471)
....++|+.+++++++++|.+ ... ..+.+++||+||..++.++.. +| ++|++.++.|.++..
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~- 110 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK- 110 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH-
Confidence 456688888899999999986 222 245678889999999888742 33 377777766654321
Q ss_pred cccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC-----CCcEEEEc--CCCCCccccHHHHHHHHHHhCC
Q 012104 138 GYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIICG--GSAYPRDWDYARFRAVADKCGA 210 (471)
Q Consensus 138 ~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~-----~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~ 210 (471)
.+...| .+++.+++++ ++.+|+++|++.+.+. +|++|++. .+++|...|+++|.++|+++|+
T Consensus 111 --------~~~~~g--~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~ 179 (345)
T cd06450 111 --------AAAYLD--VKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDL 179 (345)
T ss_pred --------HHHHHh--cCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCC
Confidence 122233 3555566663 4689999999998641 57766643 6789999999999999999999
Q ss_pred EEEEeccccchhhccccCC---CCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCC
Q 012104 211 LLLCDMAHISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPS 286 (471)
Q Consensus 211 ~livD~a~~~glv~~g~~~---~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~ 286 (471)
++++|++|..+........ ..+.++|++++|+||++.+|.+ |+++. .
T Consensus 180 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~--------------------~--------- 230 (345)
T cd06450 180 WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV--------------------R--------- 230 (345)
T ss_pred eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH--------------------H---------
Confidence 9999999985543211100 1123689999999999877754 44321 1
Q ss_pred CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCC---CCCHHHHHH
Q 012104 287 LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPL---GLTGNKVEK 362 (471)
Q Consensus 287 ~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~---~~~~~~~~~ 362 (471)
+.++..+++.+...++++..++..++++++.+.|.+. |+.++.. ....++.+.+.+. +++..++.+
T Consensus 231 ---------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~iv~f~~~~~~~~~~~~~~i~~ 300 (345)
T cd06450 231 ---------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE-PNLSLVCFRLKPSVKLDELNYDLSD 300 (345)
T ss_pred ---------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CceeEEEEEECCcchhhHHHHHHHH
Confidence 3344445555555678888899999999999999887 7877543 3445555555432 345667888
Q ss_pred HHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 363 LCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 363 ~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.|.+.|+.+.....+. ....+|+++.... .+++|++++.+.|.+
T Consensus 301 ~L~~~g~~~~~~~~~~-----~~~~lRis~~~~~---~t~~di~~l~~~l~~ 344 (345)
T cd06450 301 RLNERGGWHVPATTLG-----GPNVLRFVVTNPL---TTRDDADALLEDIER 344 (345)
T ss_pred HHHhcCCEEEEeeEEC-----CeEEEEEEecCCC---CCHHHHHHHHHHHHh
Confidence 8888865543321111 2468999986432 248999999998865
No 168
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=5.6e-21 Score=197.19 Aligned_cols=348 Identities=16% Similarity=0.148 Sum_probs=203.9
Q ss_pred CCeeEecCC-CCCcHHHHHHHhhhh-hccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC---CCCCCceeeecCC-
Q 012104 32 RGIELIASE-NFTSFAVIEALGSAL-TNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL---DPTQWGVNVQPYS- 105 (471)
Q Consensus 32 ~~i~li~s~-n~~s~~v~~a~~~~l-~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~---~~~~~~~~v~~~s- 105 (471)
+.++|..++ .+.++..++++...+ ... ||.. .......|+.+.+.+.+.++. +.+++ +|..++
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----Y~~p-----~g~~~~~e~iv~~y~~~~~~~~~~~~~~~--~V~it~G 163 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGIIGDN----YPVP-----DRMLPHSEKIVHQYLIQEMCGNKPPPGEF--DLFAVEG 163 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhhcCC----CCCC-----CCCHHHHHHHHHHHHHhhccCCCCCCCcC--eEEEeCC
Confidence 346666555 444555555554443 222 3211 112234555555565555432 22111 455444
Q ss_pred hHHHHHHHHHH-----hcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-C-----CCCCHHHHH
Q 012104 106 GSPANFAAYTA-----VLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-T-----GYIDYDKLE 174 (471)
Q Consensus 106 Gt~A~~~~~~a-----ll~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~-----~~iD~~~le 174 (471)
+++|+..++.+ +++|||+|++++|.|..+.. .+...+.+.++++++.+++ . +.+|.++++
T Consensus 164 at~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~---------~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~ 234 (521)
T TIGR03801 164 GTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE---------IPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELE 234 (521)
T ss_pred HHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH---------HHHHhcCCcEEEEeecccccccccccCCCCHHHHH
Confidence 55788888876 78999999999999987653 1223443456666655432 2 789999999
Q ss_pred HHhhhCCCcEEE-Ec-CCCCCccccHH---HHHHHHHHh--CCEEEEeccccchhhccccCCCCCC-Cc--cEEEeCCCC
Q 012104 175 EKALDFRPKLII-CG-GSAYPRDWDYA---RFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE-YC--HIVTTTTHK 244 (471)
Q Consensus 175 ~~~~~~~pklIi-~~-~s~~g~~~d~~---~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~-~a--Div~~s~~K 244 (471)
+++. .++|+|+ ++ +||+|..++.+ +|.++|+++ +++||+|++|. .+.. .+.+.+. .. -|++.|++|
T Consensus 235 ~~~~-~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~sl~~~~~~~vI~v~SfSK 310 (521)
T TIGR03801 235 KLRD-PSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYG-TFVD--DFRSLFAELPYNTIGVYSFSK 310 (521)
T ss_pred HhcC-CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCch-hhcc--cccchhhhCCCCEEEEEcchh
Confidence 8765 5789887 45 78999999854 556778886 99999999997 4443 2223222 12 288999999
Q ss_pred c--CCCCCeEEEEeeCCC------CCC---------------CCCCCCCcccchHhhh----hh-cC-CCCCCCCCcHHH
Q 012104 245 S--LRGPRAGMIFYRKGP------KPP---------------KKGQPEGAVYDFEDKI----NF-AV-FPSLQGGPHNHQ 295 (471)
Q Consensus 245 ~--l~GprgG~i~~~~~~------~~~---------------~~~~~~i~~~~l~~~i----~~-~~-~~~~~g~p~~~~ 295 (471)
+ ++|+|.|+++++++. ... ...-..+ .+.+++ .. .. .....++|...+
T Consensus 311 ~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~---~fidr~vadsr~v~~~~~~g~s~p~Q~q 387 (521)
T TIGR03801 311 YFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKL---KFIDRLVADSRQVALNHTAGLSTPQQVQ 387 (521)
T ss_pred hccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhh---hhHHHHHHHHHHHHHhccCCCCcHHHHH
Confidence 9 589999999987530 000 0000000 111111 00 00 011113333333
Q ss_pred HH--HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe-eCCCCCeeEEEEccCCC---------------CCH
Q 012104 296 IG--ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV-TGGTENHLVLWDLRPLG---------------LTG 357 (471)
Q Consensus 296 ia--a~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~-~~~~~~~~~~v~~~~~~---------------~~~ 357 (471)
++ ++..++.. .....++..+.+.++.+.+.+.| |+.+. ..+.+.+++|+|+...+ .+.
T Consensus 388 ~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L---g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~ 463 (521)
T TIGR03801 388 MALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL---GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSP 463 (521)
T ss_pred HHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc---CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCH
Confidence 34 22223322 12223445556666666677766 65432 23455678899986321 134
Q ss_pred HHH-HHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 358 NKV-EKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 358 ~~~-~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.++ .+++++.||.+.++..++.+ .+++||++.. ..++++.++++.|.+.+...
T Consensus 464 ~~~~~~L~~e~gV~v~PG~~Fg~~----~~~vRisla~-----l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 464 VDVLFRLAEETGIVLLPGGGFGGP----EWSVRVSLAN-----LNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred HHHHHHHHHhCCEEEeCchhcCCC----CCeEEEEecC-----CCHHHHHHHHHHHHHHHHHH
Confidence 444 67778999999988777632 3579999832 34788999999888877543
No 169
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-21 Score=178.65 Aligned_cols=327 Identities=20% Similarity=0.221 Sum_probs=229.2
Q ss_pred eeEecCCCCC----cHHHHHHHhhhhhccCCCCCCCCCCCCcchhH-HHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 34 IELIASENFT----SFAVIEALGSALTNKYSEGMPGNRYYGGNEFI-DEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 34 i~li~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~-~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
|......||+ .|++.++-...+ ..|..|..+.|+.-|++-+ ..+| ..++++.+.+. .+...|+..
T Consensus 69 ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypscfd 138 (417)
T KOG1359|consen 69 ILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSCFD 138 (417)
T ss_pred eeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccccc
Confidence 3344567776 699999987766 5567788899998888655 4555 56888988876 355679999
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhh---hCCCcEE
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKAL---DFRPKLI 185 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~---~~~pklI 185 (471)
||..++-+++.|.|.|+...+.|.+.+ +| +.... .| +++|+-.++..+. +++-|+|
T Consensus 139 ANag~feail~pedAvfSDeLNhASII-dG--------irLck------ry------~h~dv~~l~~~l~~a~k~r~klv 197 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASII-DG--------IRLCK------RY------RHVDVFDLEHCLISACKMRLKLV 197 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhh-hh--------hHHHh------hh------ccchhHHHHHHHHHhhhheEEEE
Confidence 999999999999999999988775544 22 11111 11 4566666665443 3566888
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---cc--CCCCCCCccEEEeCCCCcCCCCCeEEEEeeC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QE--AANPFEYCHIVTTTTHKSLRGPRAGMIFYRK 258 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~--~~~p~~~aDiv~~s~~K~l~GprgG~i~~~~ 258 (471)
++. .|+-|.+.|+++|.+++++||+++++|++|+.|+... |. ....+...|++.+++.|.+.|-.||++.+++
T Consensus 198 ~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~ 277 (417)
T KOG1359|consen 198 VTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPK 277 (417)
T ss_pred EecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCCh
Confidence 876 6888999999999999999999999999999887543 11 1122346789999999999999999999998
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHH-HHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALA-VALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a-~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ +...+++...|+.+++.....+.+.+ .++..+.. -....++...|.+++++.++..||++.
T Consensus 278 ~---------------li~llrqr~RpylFSnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~aGftIs 340 (417)
T KOG1359|consen 278 P---------------LISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAAGFTIS 340 (417)
T ss_pred h---------------HHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCceec
Confidence 4 55555554455555543333322222 23333221 245677888999999999999999983
Q ss_pred eCCCCCeeEE-EEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVL-WDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 338 ~~~~~~~~~~-v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+ .+|.+. +-+.+.. -...+.+.|.+.||.|-.-+.|-. |.+...||+-.++..+ ++|++++.+++.++.
T Consensus 341 -g--~~hPI~pv~lGda~-lA~~~ad~lLk~Gi~Vigfs~PvV--P~gkariRVqiSAaHt----~edid~~i~Af~~vg 410 (417)
T KOG1359|consen 341 -G--ASHPICPVMLGDAR-LASKMADELLKRGIYVIGFSYPVV--PKGKARIRVQISAAHT----EEDIDRLIEAFSEVG 410 (417)
T ss_pred -C--CCCCccceecccHH-HHHHHHHHHHhcCceEEeecCCcC--CCCceEEEEEEehhcC----HHHHHHHHHHHHHHH
Confidence 3 345442 2232211 123456777788999977655542 3345689998887765 899999999998876
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
+.
T Consensus 411 r~ 412 (417)
T KOG1359|consen 411 RF 412 (417)
T ss_pred Hh
Confidence 53
No 170
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=8.6e-21 Score=190.93 Aligned_cols=283 Identities=15% Similarity=0.072 Sum_probs=189.3
Q ss_pred HHHHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHhcCCC-CEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
++.+++++|++.+ +|.+++| ++++..++.+++.|| |+|++.+|.|+.+.. .....| .+++.++
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~---------~~~~~g--~~~~~v~ 129 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV---------CARLQN--APLVEVP 129 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH---------HHHHcC--CEEEEEe
Confidence 3567778888763 5666666 469999999999999 799999988764321 112234 3555555
Q ss_pred ecC--CCCCCCHHHHHHHhhhCCCcEEEE-c-CCCCCccccHHHHHHHHHH--hCCEEEEeccccchhhccccCCCCCCC
Q 012104 161 VNS--STGYIDYDKLEEKALDFRPKLIIC-G-GSAYPRDWDYARFRAVADK--CGALLLCDMAHISGLVAAQEAANPFEY 234 (471)
Q Consensus 161 v~~--~~~~iD~~~le~~~~~~~pklIi~-~-~s~~g~~~d~~~i~~ia~~--~g~~livD~a~~~glv~~g~~~~p~~~ 234 (471)
++. +++.+|++++++.+...++++|++ + +||+|..++.+++.++++. .+++||+|++|. .+.........++.
T Consensus 130 ~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~ 208 (364)
T PRK04781 130 LVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLAR 208 (364)
T ss_pred cCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhh
Confidence 532 235689999877665567898875 4 7899999999999888875 389999999987 55432111011122
Q ss_pred cc--EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 235 CH--IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 235 aD--iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
.+ +++.|++|+ ++|.|.||+++++ ++.+.+.+...+.. .....+.++. .++.......
T Consensus 209 ~~~vi~~~SfSK~~gl~GlRvGy~v~~~---------------~l~~~l~~~~~~~~--~~~~~~~~a~-~~l~~~~~~~ 270 (364)
T PRK04781 209 YDNLAVLRTLSKAHALAAARIGSLIANA---------------ELIAVLRRCQAPYP--VPTPCAALAE-QALSAPALAV 270 (364)
T ss_pred CCCEEEEecChhhcccccceeeeeeCCH---------------HHHHHHHhccCCCC--CCHHHHHHHH-HHHhcccHHH
Confidence 22 889999998 5799999999987 56666665543332 1122222222 2343211123
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 311 FKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 311 ~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
..+..+++.++++.+.+.|++. |+..+. ++++.++|+++. +..++.+.|.++||.|.++..++ ...+++|
T Consensus 271 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-p~~g~f~~~~~~----~~~~~~~~l~~~gI~v~~~~~~~----~~~~~~R 341 (364)
T PRK04781 271 TARRVAEVRAERERLHAALAQLPGVRRVY-PSQGNFLLVRFD----DAEAAFQALLAAGVVVRDQRAAP----RLSDALR 341 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC----CHHHHHHHHHHCCeEEeeCCCCC----CCCCeEE
Confidence 4555667778888999999887 664323 344566888874 45778888999999998764221 1246899
Q ss_pred EecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 390 IGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 390 ig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
|++. ..++++++.++|+++
T Consensus 342 is~~-------~~~~~~~l~~al~~~ 360 (364)
T PRK04781 342 ITLG-------TPEQNDRVLAALQRT 360 (364)
T ss_pred EeCC-------CHHHHHHHHHHHHHH
Confidence 9973 278999999999764
No 171
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.89 E-value=2.4e-20 Score=187.37 Aligned_cols=316 Identities=15% Similarity=0.066 Sum_probs=193.5
Q ss_pred ccCCeeEecCCC--CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC-CCCCceeeecCCh
Q 012104 30 QCRGIELIASEN--FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD-PTQWGVNVQPYSG 106 (471)
Q Consensus 30 ~~~~i~li~s~n--~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~-~~~~~~~v~~~sG 106 (471)
....++|..+++ ..++.+.+++..... . .+|+.. .....+.+...+++.+.+|.+ .+. -+|..++|
T Consensus 20 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~--~~Y~~~------~G~~~lr~~ia~~~~~~~~~~~~~~--~~I~it~G 88 (357)
T TIGR03539 20 PDGIVDLSVGTPVDPVPPLIRAALAAAAD-A--PGYPQT------WGTPELREAIVDWLERRRGVPGLDP--TAVLPVIG 88 (357)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHh-h--CCCCcc------cCCHHHHHHHHHHHHHhcCCCCCCc--CeEEEccC
Confidence 345678876654 346777888765432 1 233321 112234434445666655543 222 24555666
Q ss_pred -HHHHHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcE
Q 012104 107 -SPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKL 184 (471)
Q Consensus 107 -t~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pkl 184 (471)
++|+..++.++ ++|||.|++.+|.|.++.. .+...|. +++.+ + |++.++ ..++++
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~---------~~~~~g~--~~~~v--~------~~~~l~----~~~~~~ 145 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEV---------GALLAGA--TPVAA--D------DPTELD----PVGPDL 145 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHH---------HHHhcCC--EEecc--C------ChhhcC----ccCccE
Confidence 56888888887 7999999999999976642 1223333 33333 1 223222 247888
Q ss_pred EEE-c-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCCCC------C--ccEEEeCCCCc--CCCC
Q 012104 185 IIC-G-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANPFE------Y--CHIVTTTTHKS--LRGP 249 (471)
Q Consensus 185 Ii~-~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~------~--aDiv~~s~~K~--l~Gp 249 (471)
|++ + +||+|..++.+ +|.++|+++|+++|+|++|. .+.+.+.....+. . --+++.|++|. ++|.
T Consensus 146 v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 146 IWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 875 4 78999998755 57788999999999999996 5554432222121 0 12889999998 6899
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
|+||+++++ ++.+.+.........+ ++.....++..++.. ....++..+.+.++++.+.+.|
T Consensus 225 R~G~~i~~~---------------~~~~~~~~~~~~~~~~-~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L 286 (357)
T TIGR03539 225 RAGFVAGDP---------------ALVAELLTVRKHAGLM-VPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPAL 286 (357)
T ss_pred eEEEEecCH---------------HHHHHHHHHHhhcccC-CCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 999999876 4554444322222122 222222333334422 2234556667777888899999
Q ss_pred HcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 330 TGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 330 ~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
++.|+.+. .+.++.++|+++.. +..++.+.|.++||.+.++..++. ...+++||++.. .++++++..
T Consensus 287 ~~~g~~~~-~p~~~~~~~~~~~~---~~~~~~~~l~~~gV~v~pg~~f~~---~~~~~iRis~~~------~~~~i~~~~ 353 (357)
T TIGR03539 287 EKAGFRID-HSEAGLYLWATRGE---DAWDTVDRLAELGILVAPGDFYGP---AGSQHVRVALTA------TDERIAAAV 353 (357)
T ss_pred HHcCCCCc-CCCccEEEEEECCC---CHHHHHHHHHhCCEEECCccccCC---CCCCeEEEEecC------CHHHHHHHH
Confidence 88888764 34567778887632 566788888999999988765432 124799999832 256666655
Q ss_pred HH
Q 012104 410 EF 411 (471)
Q Consensus 410 ~~ 411 (471)
+.
T Consensus 354 ~~ 355 (357)
T TIGR03539 354 AR 355 (357)
T ss_pred Hh
Confidence 44
No 172
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=2.7e-20 Score=176.56 Aligned_cols=346 Identities=19% Similarity=0.136 Sum_probs=224.2
Q ss_pred CCeeEecCCC-----C-CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC--CCCCceeeec
Q 012104 32 RGIELIASEN-----F-TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQP 103 (471)
Q Consensus 32 ~~i~li~s~n-----~-~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~--~~~~~~~v~~ 103 (471)
..|.|..++. + +++.+.+|+...+...-..||...- |- . .|++.+++..+-+ ..--.-.|..
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~---G~------~-~AR~AVAeYl~~~l~~kl~a~DV~l 131 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSV---GI------L-PARRAVAEYLNRDLPNKLTADDVVL 131 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCcc---cc------H-HHHHHHHHHhhcCCCCccCcCceEE
Confidence 4566655442 2 4778888877666544444553221 11 1 1334445553211 1000012334
Q ss_pred CCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhhCC
Q 012104 104 YSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALDFR 181 (471)
Q Consensus 104 ~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~~~ 181 (471)
+|| ++|+..++.+|.+||-.||++.|.++=+.+ .....+.++..|++-| ++|.||++.+|.++.+..
T Consensus 132 tsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~-----------~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT 200 (447)
T KOG0259|consen 132 TSGCSQAIELAISSLANPGANILLPRPGFPLYDT-----------RAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT 200 (447)
T ss_pred eccchHHHHHHHHHhcCCCCceecCCCCCchHHH-----------hhhhcCceeEeecccCcccceechHHHHHhhccCe
Confidence 455 689999999999999999999988763322 1222335666776655 469999999999998643
Q ss_pred CcEEEEc-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc----EEEeCCCCc--CCCCC
Q 012104 182 PKLIICG-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH----IVTTTTHKS--LRGPR 250 (471)
Q Consensus 182 pklIi~~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD----iv~~s~~K~--l~Gpr 250 (471)
..+|+.| +||.|.+++. ++|+++|+++|+.+|.|+.|. .+++++....|+. .+. +..++.+|- .+|||
T Consensus 201 ~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~-~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWR 279 (447)
T KOG0259|consen 201 VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYG-HTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWR 279 (447)
T ss_pred eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcc-eeecCCCCccchhhccccCceEeecccccccccCCce
Confidence 3455666 7889988876 577788999999999999997 7788776555664 222 668899997 79999
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
.||++..+.. .+.... ...+.+.. +-....+|.....+|+-.-|...-++-|.....-+..|+....+.|+
T Consensus 280 lGWi~~hD~~-gvf~~~------~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk 350 (447)
T KOG0259|consen 280 LGWIALHDPR-GVFRDT------KVVQGIKN--FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLK 350 (447)
T ss_pred eeeEEEeccc-ccccch------HHHHHHHH--HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHh
Confidence 9999998741 110000 11112222 11233567777777777777776555567777788889999999999
Q ss_pred cC-CceEeeCCCCCeeEEEEccC-----CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHH
Q 012104 331 GK-GYSLVTGGTENHLVLWDLRP-----LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKD 404 (471)
Q Consensus 331 ~~-g~~i~~~~~~~~~~~v~~~~-----~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d 404 (471)
+. +++....+.+..++|+.+.- .+-|-+...++.++.++.+-|+..++ .++++|+.+..- ..+.++.
T Consensus 351 ~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~-----~~nw~Ri~i~~~--~~~leea 423 (447)
T KOG0259|consen 351 DIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFG-----LKNWLRIVITVE--EEMLEEA 423 (447)
T ss_pred cCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEecccccc-----CCCeEEEEEccC--hHHHHHH
Confidence 87 77643455667777775432 12133345778889999998776655 358999987332 2245677
Q ss_pred HHHHHHHHHHH
Q 012104 405 FEQIGEFLHRA 415 (471)
Q Consensus 405 ~~~l~~~i~~~ 415 (471)
++||.++..|=
T Consensus 424 ~~Rik~Fc~RH 434 (447)
T KOG0259|consen 424 FSRIKEFCDRH 434 (447)
T ss_pred HHHHHHHHHhh
Confidence 77777776653
No 173
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.88 E-value=8.5e-22 Score=196.19 Aligned_cols=265 Identities=19% Similarity=0.203 Sum_probs=175.6
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
+++.++++||++.. ...++|| .+|.++++++++|||+|++...+|-+.+ | .+.+.|. .++++.
T Consensus 71 Ae~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~-~--------alil~ga--~Pvyi~ 134 (417)
T PF01276_consen 71 AEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY-N--------ALILSGA--IPVYIP 134 (417)
T ss_dssp HHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH-H--------HHHHHTE--EEEEEE
T ss_pred HHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH-H--------HHHHcCC--eEEEec
Confidence 56789999999984 2334565 6999999999999999999996654433 1 2334554 333332
Q ss_pred e-cCCC---CCCCH-----HHHHHHhhhCC----Cc-EEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccc
Q 012104 161 V-NSST---GYIDY-----DKLEEKALDFR----PK-LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (471)
Q Consensus 161 v-~~~~---~~iD~-----~~le~~~~~~~----pk-lIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g 226 (471)
. +.+. +.+++ +.|+++++++. ++ +|+++++-+|...|+++|.++|+++|.+|++|+||++.+.+..
T Consensus 135 p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 135 PEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHP 214 (417)
T ss_dssp EEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSG
T ss_pred CCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCC
Confidence 2 2221 34666 99999998643 22 4556788899999999999999999999999999998877764
Q ss_pred cCCCCCC-Ccc-------EEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHH
Q 012104 227 EAANPFE-YCH-------IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIG 297 (471)
Q Consensus 227 ~~~~p~~-~aD-------iv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ia 297 (471)
...+.+. ++| +++.|+||+|++.. ++++..+.... --.++++.+..-...++|+...+|
T Consensus 215 lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~------------v~~~~~~~~l~~~~TTSPSY~lmA 282 (417)
T PF01276_consen 215 LPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRI------------VDHERVNEALSMHQTTSPSYPLMA 282 (417)
T ss_dssp GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCC------------TTHHHHHHHHHHHS-SS--HHHHH
T ss_pred CccchhhccCccccccceeeeechhhcccccccceEEEecCCCc------------ccHHHHHHHHHHHcCCChHHHHHH
Confidence 4445555 799 99999999999984 68888877410 013345544322334689999999
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH---cC-CceEeeCC----C------------------------CCee
Q 012104 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLT---GK-GYSLVTGG----T------------------------ENHL 345 (471)
Q Consensus 298 a~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~---~~-g~~i~~~~----~------------------------~~~~ 345 (471)
++.+|.+++...+-++..++.+++++.+++.|+ +. +|+++... . |.--
T Consensus 283 SlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K 362 (417)
T PF01276_consen 283 SLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPTK 362 (417)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TTE
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCcE
Confidence 999998887444557888899999999999993 33 56654211 0 1112
Q ss_pred EEEEc---------cCCCCCHHHHHHHHhhcCeEeccC
Q 012104 346 VLWDL---------RPLGLTGNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 346 ~~v~~---------~~~~~~~~~~~~~L~~~gI~v~~~ 374 (471)
+.+.+ ...|+++..+.+.|+++||.+.+.
T Consensus 363 ~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~ 400 (417)
T PF01276_consen 363 LTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKT 400 (417)
T ss_dssp EEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEE
T ss_pred EEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEec
Confidence 34444 456899999999999999999874
No 174
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.88 E-value=1.6e-20 Score=189.72 Aligned_cols=320 Identities=13% Similarity=0.032 Sum_probs=201.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pG 121 (471)
.+++-++++...+.+.+. ++..+..+.+| +++++++|.++ .+.++||++|+.+++.++ ++||
T Consensus 9 ~~~~~~~~~~~~l~~~~~--------~g~~~~~~~~e----~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~G 71 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKL--------CGDGGFTRRCQ----QWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPG 71 (375)
T ss_pred CCHHHHHHHHHHHHcCCc--------cCCCHHHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCC
Confidence 344445566555544332 11123445555 56778899875 355778999998887766 7999
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHH
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARF 201 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i 201 (471)
|+|++++++|.+... .+...| .+++.++++++++.+|++++++.+.. ++|+|+.. +++|...|+++|
T Consensus 72 d~Viv~~~t~~~~~~---------~~~~~G--~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~-~~~G~~~~~~~i 138 (375)
T PRK11706 72 DEVIMPSYTFVSTAN---------AFVLRG--AKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV-HYAGVACEMDTI 138 (375)
T ss_pred CEEEECCCCcHHHHH---------HHHHcC--CEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe-CCCCCccCHHHH
Confidence 999999998876532 122334 46677778877788999999999864 78988755 468988999999
Q ss_pred HHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhh
Q 012104 202 RAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDK 278 (471)
Q Consensus 202 ~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~ 278 (471)
.++|+++|++||+|++|+.|..+.|. ++. ..|+.++|+| |+++.+.||+++++++ ++.++
T Consensus 139 ~~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~--------------~~~~~ 201 (375)
T PRK11706 139 MALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCFSFHETKNYTAGEGGALLINDP--------------ALIER 201 (375)
T ss_pred HHHHHHcCCEEEEECccccccccCCe---eeecCcCEEEEeCCCCccccccCCeEEEECCH--------------HHHHH
Confidence 99999999999999999877544332 222 4588888988 9886666777777653 34333
Q ss_pred hhhcCCCC-----------------CCC-CCc-HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC----ce
Q 012104 279 INFAVFPS-----------------LQG-GPH-NHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG----YS 335 (471)
Q Consensus 279 i~~~~~~~-----------------~~g-~p~-~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g----~~ 335 (471)
+......+ ..| +.. ....+++. +.++ ..+++..++..++++.+.+.|.+.. +.
T Consensus 202 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~ql--~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~ 277 (375)
T PRK11706 202 AEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYL--WAQL--EAADRINQRRLALWQRYYDALAPLAEAGRIE 277 (375)
T ss_pred HHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHH--HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCcCCeee
Confidence 22111000 001 111 22333332 2222 2456777778888888989887652 33
Q ss_pred Eee--CC--CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCC----------CCCe----eE-EecCCCC
Q 012104 336 LVT--GG--TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSAL----------APGG----VR-IGTPAMT 396 (471)
Q Consensus 336 i~~--~~--~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~----------~~~~----iR-ig~~~~t 396 (471)
+.. ++ ...|++++.+.+ +.+.+++.+.|.++||.++....|....+. .+.. -| |++| .
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP--~ 354 (375)
T PRK11706 278 LPSIPDDCKHNAHMFYIKLRD-LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP--L 354 (375)
T ss_pred cCCCCCCCceeeEEEEEEECC-cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc--C
Confidence 211 11 123455665543 457889999999999998765444321110 0000 00 2232 2
Q ss_pred CcCCCHHHHHHHHHHHHHHH
Q 012104 397 SRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 397 ~~g~~~~d~~~l~~~i~~~l 416 (471)
...++++|++++++.|.+.+
T Consensus 355 ~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 355 FYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 33467889999998887653
No 175
>PRK05839 hypothetical protein; Provisional
Probab=99.88 E-value=5e-20 Score=186.12 Aligned_cols=325 Identities=16% Similarity=0.095 Sum_probs=197.8
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-H
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~ 108 (471)
+.++|..+++. .++.+.+++..... . ...|+.. .....+.+...+++++.+|.+-+. -+|..++|+ +
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~-~-~~~Y~~~------~G~~~lr~aia~~l~~~~g~~~~~--~~I~it~G~~~ 94 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAH-L-LNKYPKS------AGEESLREAQRGFFKRRFKIELKE--NELIPTFGTRE 94 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhh-c-cCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCc--ceEEEecCcHH
Confidence 66788766653 46778888765432 1 1223322 222234334446667776743211 357777776 5
Q ss_pred HHHHHHHHhc--CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEE
Q 012104 109 ANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLI 185 (471)
Q Consensus 109 A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklI 185 (471)
|+..++.+++ ++||.|++++|.|+.+.. .+...| .++++++.+++ ++.+|.++.+ + .++|+|
T Consensus 95 al~~~~~~~~~~~~gd~vlv~~P~y~~~~~---------~~~~~g--~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v 159 (374)
T PRK05839 95 VLFNFPQFVLFDKQNPTIAYPNPFYQIYEG---------AAIASR--AKVLLMPLTKENDFTPSLNEKE--L--QEVDLV 159 (374)
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCchhhHH---------HHHhcC--CEEEEeecccccCCcCCcchhh--h--ccccEE
Confidence 7777777774 589999999999987642 122334 45666666633 3566655432 2 368887
Q ss_pred EE-c-CCCCCccccHHHH---HHHHHHhCCEEEEeccccchhhccccCCCCCC--------Ccc--EEEeCCCCc--CCC
Q 012104 186 IC-G-GSAYPRDWDYARF---RAVADKCGALLLCDMAHISGLVAAQEAANPFE--------YCH--IVTTTTHKS--LRG 248 (471)
Q Consensus 186 i~-~-~s~~g~~~d~~~i---~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--------~aD--iv~~s~~K~--l~G 248 (471)
++ + +||+|..++.+++ .++|+++|++||+|++|. .+...+..++.+. ..+ |++.|++|+ ++|
T Consensus 160 ~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 74 4 7899999987655 566889999999999987 4433222222221 112 889999997 689
Q ss_pred CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 012104 249 PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (471)
Q Consensus 249 prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~ 328 (471)
.|.||+++++ ++.+.+.........+.+...+.++. .++.. ...+++..+++.++.+.+.+.
T Consensus 239 lRiG~ii~~~---------------~~~~~~~~~~~~~~~~~~~~~q~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~~~ 300 (374)
T PRK05839 239 LRSGFIAGDA---------------SILKKYKAYRTYLGCASPLPLQKAAA-VAWLD--DEHAEFFRNIYAKNLKLAREI 300 (374)
T ss_pred ceeEEEecCH---------------HHHHHHHHHHhhcCCCCChHHHHHHH-HHhcc--chHHHHHHHHHHHHHHHHHHh
Confidence 9999999876 45555543321111223333333332 23322 334566677777777776665
Q ss_pred HHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 329 LTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 329 L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
| |.. .+.++.++|+++. +..++.+.| +++||.|.++..++.. ...++++||++.. .++++.+
T Consensus 301 l---~~~---~p~gg~fi~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~~-~~~~~~iRis~~~------~~~~~~~ 363 (374)
T PRK05839 301 L---GIT---IPPATFYVWLPVD----NDEEFTKKLYQNEGIKVLPGSFLGRN-GIGKGYVRIALVY------DTPKLEK 363 (374)
T ss_pred c---CCC---CCCeeEEEEEeCC----ChHHHHHHHHHHCCEEEeCchhhCCC-CCCCCeEEEEecC------CHHHHHH
Confidence 5 443 2455778899875 235565555 5699999987655421 1135899999831 3677777
Q ss_pred HHHHHHHHHH
Q 012104 408 IGEFLHRAVT 417 (471)
Q Consensus 408 l~~~i~~~l~ 417 (471)
..+.|.+++.
T Consensus 364 ~l~~l~~~l~ 373 (374)
T PRK05839 364 ALEIIKTYLE 373 (374)
T ss_pred HHHHHHHHhh
Confidence 7777766553
No 176
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=7e-21 Score=190.95 Aligned_cols=275 Identities=17% Similarity=0.145 Sum_probs=183.4
Q ss_pred HHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCC-CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
+.+++++|++.+ +|..++|+ +++..++.++++|| |+|++.+|.|..+.. .+...| .+++.+++
T Consensus 67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~---------~~~~~g--~~v~~v~~ 131 (354)
T PRK04635 67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAI---------SAETFN--VGVKALPL 131 (354)
T ss_pred HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH---------HHHHcC--CEEEEEec
Confidence 556678898874 45556665 69999999999999 999999998876431 112234 35555665
Q ss_pred cCCCCCCCHHHHHHHhhhCCCcEEEE-c-CCCCCccccHHHHHHHHHHh-CCEEEEeccccchhhccccCCCCCC-Ccc-
Q 012104 162 NSSTGYIDYDKLEEKALDFRPKLIIC-G-GSAYPRDWDYARFRAVADKC-GALLLCDMAHISGLVAAQEAANPFE-YCH- 236 (471)
Q Consensus 162 ~~~~~~iD~~~le~~~~~~~pklIi~-~-~s~~g~~~d~~~i~~ia~~~-g~~livD~a~~~glv~~g~~~~p~~-~aD- 236 (471)
+ +++.+|.+.++. + .++|+|++ + +||+|..++.+++.++++.. +++|++|++|. .+........... +..
T Consensus 132 ~-~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~ 206 (354)
T PRK04635 132 T-ADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNL 206 (354)
T ss_pred C-CCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCE
Confidence 5 347899998873 3 47898874 4 78999999999999999874 79999999986 4432111001011 112
Q ss_pred EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 237 IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 237 iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
+++.|+||+ ++|.|.|++++++ ++.+.+.....+. +.+...+.++ ..++.....+..++.
T Consensus 207 iv~~S~SK~~~l~GlRlG~~i~~~---------------~~~~~l~~~~~~~--~~~~~~~~~a-~~~l~~~~~~~~~~~ 268 (354)
T PRK04635 207 VVLRTLSKAFALAGARCGFTLANE---------------ELIEILMRVIAPY--PVPLPVSEIA-TQALSEAGLARMKFQ 268 (354)
T ss_pred EEEechHHHhhhhHHHHhhhhCCH---------------HHHHHHHhhcCCC--CCCHHHHHHH-HHHHhcccHHHHHHH
Confidence 789999999 4788999999876 5566555433222 1222222222 223332111234555
Q ss_pred HHHHHHHHHHHHHHHHcCC-ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecC
Q 012104 315 AKQVKANAVALGNYLTGKG-YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTP 393 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g-~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~ 393 (471)
.+++.++++.+.+.|++.+ +.+. ++. ..++|+++. +..++.+.|.++||.++.... +..++++||++.
T Consensus 269 ~~~~~~~r~~l~~~L~~~~~~~~~-~~~-g~f~~~~~~----~~~~~~~~l~~~gv~v~~~~~-----~~~~~~lRis~~ 337 (354)
T PRK04635 269 VLDLNAQGARLQAALSMYGGAKVL-EGN-GNYVLAKFD----DVDAVFKALWDAGIVARAYKD-----PRLANCIRFSFS 337 (354)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEC-CCC-CcEEEEECC----CHHHHHHHHHHCCEEEEECCC-----CCCCCeEEEEeC
Confidence 6677778888999999875 7764 333 446788764 467788889999999975321 112468999972
Q ss_pred CCCCcCCCHHHHHHHHHHHHH
Q 012104 394 AMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 394 ~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.++|++++.++|++
T Consensus 338 -------~~e~~~~l~~al~~ 351 (354)
T PRK04635 338 -------NRAETDKLIGLIRN 351 (354)
T ss_pred -------CHHHHHHHHHHHHH
Confidence 37899999998865
No 177
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=4.4e-21 Score=192.13 Aligned_cols=277 Identities=17% Similarity=0.113 Sum_probs=185.0
Q ss_pred HHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCC-CEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
++.+++.+|++.+ +|..++|+ +++..++.++++|| |+|++.+|+|+.+.. .+...|. +++.++
T Consensus 63 ~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~---------~~~~~G~--~~~~v~ 127 (351)
T PRK01688 63 IENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV---------SAETIGV--EIRTVP 127 (351)
T ss_pred HHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHH---------HHHHcCC--EEEEee
Confidence 3567788899874 45566665 69999999999997 999999998875421 1223443 445555
Q ss_pred ecCCCCCCCHHHHHHHhhhCCCcEEE-Ec-CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccCCCCCC-Cc
Q 012104 161 VNSSTGYIDYDKLEEKALDFRPKLII-CG-GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEAANPFE-YC 235 (471)
Q Consensus 161 v~~~~~~iD~~~le~~~~~~~pklIi-~~-~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~~~p~~-~a 235 (471)
++ +++.+|++++++.+ .++++|+ ++ +||+|..++.+++.++++.. +++|++|++|. .+.........+. +.
T Consensus 128 ~~-~~~~~d~~~l~~~~--~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~-~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 128 TL-DNWQLDLPAIADNL--DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYI-EFCPQASLAGWLAEYP 203 (351)
T ss_pred cC-CCCCCCHHHHHHhc--cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchh-hcCCCCChHHHHhhCC
Confidence 55 35789999999877 3788776 55 78999999998888887653 68999999986 4432110000011 22
Q ss_pred c-EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 236 H-IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 236 D-iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
. +++.|++|+ ++|.|.|++++++ ++.+.+.+...+...+ ...+.++ ..++.....+.++
T Consensus 204 n~iv~rSfSK~~glaGlRiGy~i~~~---------------~~i~~l~~~~~~~~v~--~~~~~~a-~~~L~~~~~~~~~ 265 (351)
T PRK01688 204 HLVILRTLSKAFALAGLRCGFTLANE---------------EVINLLLKVIAPYPLS--TPVADIA-AQALSPQGIAAMR 265 (351)
T ss_pred CEEEEecchHhhcCHHHHHhHHhCCH---------------HHHHHHHhccCCCCCC--HHHHHHH-HHHHhcchHHHHH
Confidence 3 889999998 5688999999876 5556666544333211 1112222 2234321112456
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 313 AYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
+..+++.++++++.+.|++. |+..+. +++.+++|+++. +..++.+.|.++||.|.....+. ...+++||+
T Consensus 266 ~~~~~~~~~r~~l~~~L~~~~~~~~~~-ps~~nfi~~~~~----~~~~l~~~L~~~gi~vr~~~~~~----~~~~~iRis 336 (351)
T PRK01688 266 ERVAEINANRQWLIAALKEIPCVEQVF-DSETNYILARFT----ASSAVFKSLWDQGIILRDQNKQP----GLSNCLRIT 336 (351)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC----CHHHHHHHHHHCCeEEEECCCcC----CCCCeEEEe
Confidence 66777778888999999887 664333 345567888774 46778888889999997643211 124789999
Q ss_pred cCCCCCcCCCHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i 412 (471)
+. ++++++++.++|
T Consensus 337 ~~-------~~~e~~~l~~al 350 (351)
T PRK01688 337 IG-------TREECQRVIDAL 350 (351)
T ss_pred CC-------CHHHHHHHHHhh
Confidence 73 368999998876
No 178
>PRK07908 hypothetical protein; Provisional
Probab=99.88 E-value=6.3e-20 Score=183.73 Aligned_cols=318 Identities=15% Similarity=0.119 Sum_probs=207.0
Q ss_pred HhccCCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC
Q 012104 28 RRQCRGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (471)
Q Consensus 28 ~~~~~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s 105 (471)
.+..+.++|..++|. +++.+++++...+... .+||... | ... .++.+++++|++.+ +|..++
T Consensus 19 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~~---g---~~~----lr~aia~~~~~~~~----~I~it~ 82 (349)
T PRK07908 19 DAGPGLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPSTE---D---ERR----ARAAVAARHGRTPD----EVLLLA 82 (349)
T ss_pred cCCCCeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCcc---c---hHH----HHHHHHHHhCcChh----hEEECC
Confidence 344578899888874 4778899987765432 2344321 1 122 24566778888764 344555
Q ss_pred h-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcE
Q 012104 106 G-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKL 184 (471)
Q Consensus 106 G-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pkl 184 (471)
| ++|+..++. ++|| .+++..|+|..+.. .+...| .+++.++++. ++.+|++.++ .++++
T Consensus 83 Ga~~al~~~~~--l~~~-~viv~~P~y~~~~~---------~~~~~G--~~i~~v~~~~-~~~~d~~~l~-----~~~~~ 142 (349)
T PRK07908 83 GAAEGFALLAR--LRPR-RAAVVHPSFTEPEA---------ALRAAG--IPVHRVVLDP-PFRLDPAAVP-----DDADL 142 (349)
T ss_pred CHHHHHHHHHh--cCCC-eEEEeCCCChHHHH---------HHHHcC--CEEEeeccCc-ccCcChhHhc-----cCCCE
Confidence 5 468887777 5775 45667888876532 122334 4556666663 3778888552 36787
Q ss_pred EEE-c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC--CCcc-EEEeCCCCc--CCCCCeEEEEee
Q 012104 185 IIC-G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF--EYCH-IVTTTTHKS--LRGPRAGMIFYR 257 (471)
Q Consensus 185 Ii~-~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~--~~aD-iv~~s~~K~--l~GprgG~i~~~ 257 (471)
+++ + +||+|..++.++|.++|++ +.++|+|++|. .++. +..++.. ...+ +++.|+||+ ++|.|.||++.+
T Consensus 143 i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~ 219 (349)
T PRK07908 143 VVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA 219 (349)
T ss_pred EEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecC
Confidence 764 4 7899999999999999974 88999999986 4432 3222211 2223 677899997 479999999987
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+......... .....++....+.......+++..+++.++.+.+.+.|++.|+++.
T Consensus 220 ~---------------~~~~~~~~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 281 (349)
T PRK07908 220 P---------------DVLARLTRGRAHWPV---GTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVV 281 (349)
T ss_pred H---------------HHHHHHHhcCCCCCc---cHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEec
Confidence 6 455555543222211 2222333322222111124566677778888889999988888775
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+.+..++|+++.. .+++.+.|+++||.+.++..++ ...++++||++. .+++++++.+.|.+++.
T Consensus 282 -~p~~g~~~~~~~~~----~~~~~~~l~~~gI~v~~g~~f~---~~~~~~vRis~~-------~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 282 -DPAAAPFVLVRVPD----AELLRKRLRERGIAVRRGDTFP---GLDPDYLRLAVR-------PRAEVPVLVQALAEILK 346 (349)
T ss_pred -cCCCceEEEEECCc----HHHHHHHHHhCCEEEEECCCCC---CCCCCeEEEEeC-------CCccHHHHHHHHHHHHh
Confidence 33557788888753 5678889999999998875442 113579999982 36799999999988764
No 179
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.88 E-value=9.7e-21 Score=188.63 Aligned_cols=334 Identities=14% Similarity=0.086 Sum_probs=215.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCC-CCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPG-NRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~-~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pG 121 (471)
.|.+|++++.+.+.+....|... ....-..++.+.+++ +++.++++|+++.+ +.+.+.+.|||.|+.+++.+++++|
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~-~~~~l~~l~~~~~~-~~v~~~~gsgT~a~ea~~~nl~~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANE-AESDLRELLNIPDN-YEVLFLQGGATGQFAAVPLNLLAEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHH-HHHHHHHHhCCCCC-ceEEEEcCCchHHHHHHHHhcCCCC
Confidence 57899999998886543222111 011224566666764 67899999997433 2265666779999999999999999
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec-CCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccH
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDY 198 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~-~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~ 198 (471)
|++++......|| .+.. .+...|. ...+..+-. +....+|+++++. ..++++|.+. .+++|...+
T Consensus 81 ~~~l~i~~G~fg~---r~~~----~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 81 KVADYIVTGAWSK---KAAK----EAKKYGV-VNVVASGKEGNYTKIPDPSTWEI---SEDAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CeEEEEECCHHHH---HHHH----HHHHhCC-cEEEeccccCCCCCCCCHHhcCC---CCCCCEEEEcCCCCcccEecc-
Confidence 9999987544444 2211 1223344 333332100 1224567776652 2468888654 567888765
Q ss_pred HHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCCCCCCCCcccchH
Q 012104 199 ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPKKGQPEGAVYDFE 276 (471)
Q Consensus 199 ~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~~~~~~i~~~~l~ 276 (471)
++++.+++++++|+++++|. .|..++..|++++|.||++ ||.| |+++.+++.. ...+.-..+. ++.
T Consensus 149 ----~l~~~~~~l~iVDavss~g~-----~~id~~~~d~~~~ssqK~l-gP~Glg~l~~s~~~~~~~~~~~~~~~--~~~ 216 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILS-----RPIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKDLLGRASRITPSML--NYK 216 (349)
T ss_pred ----eecccCCCeEEEEccccccC-----ccCCHHHccEEEEeccccc-CCCceEEEEECHHHHhhcccCCCCcc--hHH
Confidence 67777899999999998663 3444445679999999998 6887 8887776532 1111111111 221
Q ss_pred hhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcC-CceEeeC-C-CCC-eeEEEEcc
Q 012104 277 DKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GYSLVTG-G-TEN-HLVLWDLR 351 (471)
Q Consensus 277 ~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~-~-~~~-~~~~v~~~ 351 (471)
...+.. ...++|+.+.+.++..|++.+.++ ++++..++...+++++.+.|++. |+..... + ..+ ..+.+.+.
T Consensus 217 ~~~~~~---~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~ 293 (349)
T TIGR01364 217 IHAEND---SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLG 293 (349)
T ss_pred HHHhcC---CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecC
Confidence 111111 123689999999999999998877 69999999999999999999998 6654321 1 112 22333433
Q ss_pred CCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 352 PLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 352 ~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..++ ..++...+.+.||.+..+. . ..+.+|+|+...++ .+|++++.++|+++++
T Consensus 294 ~~~~-~~~~~~~~~~~Gi~~~~~~----~---~~g~vRvS~~~~nt----~edid~l~~al~~~~~ 347 (349)
T TIGR01364 294 NEEL-EKRFLKEAEERGLVSLKGH----R---SVGGMRASIYNAMP----LEGVQALVDFMKEFQK 347 (349)
T ss_pred ChhH-hHHHHHHHHHCCCcccCCc----c---ccCeeEEECcCCCC----HHHHHHHHHHHHHHHH
Confidence 2222 2456567888999543321 1 23689999866554 8999999999988654
No 180
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.88 E-value=7e-20 Score=187.79 Aligned_cols=305 Identities=12% Similarity=0.025 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcC-----CCCEEEE-eCCCCCCcccccccccCCcccee
Q 012104 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLE-----PHDRIMG-LDLPSGGHLTHGYYTSGGKKISA 149 (471)
Q Consensus 77 ~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~-----pGD~Vl~-~~~~~~g~~s~~~~~~~g~~~~~ 149 (471)
.+.+...+++++.+|.+-+. -+|..++|+ +|+.+++.++++ |||.|++ .+|+|+++..... .. . ..
T Consensus 78 ~LR~aia~~~~~~~g~~v~~--~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~--~~--~-~~ 150 (416)
T PRK09440 78 ELIEALAALLNERYGWNISP--QNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGL--EE--D-LF 150 (416)
T ss_pred HHHHHHHHHHHHHhCCCCCh--hhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhh--cc--C-ce
Confidence 34444446666666643221 256666666 688899999985 6999999 6999988753110 00 0 01
Q ss_pred ccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhc
Q 012104 150 TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 150 ~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
.+....+++++.+...+.+|+++++ + ..++++++ ++ +||+|.+++.+ +|.++|+++|++||+|++|.. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~d~~~l~--~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~~~ 226 (416)
T PRK09440 151 VSYRPNIELLPEGQFKYHVDFEHLH--I-DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-PFP 226 (416)
T ss_pred eecccccccccccccccCCCHHHcc--c-CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-cCC
Confidence 1111122222211113579999987 3 34667666 44 78999999865 556788999999999999952 110
Q ss_pred cccCCCCCCC-cc--EEEeCCCCc-CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHH
Q 012104 225 AQEAANPFEY-CH--IVTTTTHKS-LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALA 300 (471)
Q Consensus 225 ~g~~~~p~~~-aD--iv~~s~~K~-l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a 300 (471)
.....+..+. .+ |+++|++|+ ++|.|.||+++++ ++.+.+.........+.+...+ .+++
T Consensus 227 ~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~---------------~l~~~~~~~~~~~~~~~s~~~q-~~~~ 290 (416)
T PRK09440 227 GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADE---------------EIIEALSNMNGIISLAPGRLGP-AIAA 290 (416)
T ss_pred CcchhhcCccccCCeEEEecccccCCCcceEEEEeCCH---------------HHHHHHHHHHHHhccCCCcHHH-HHHH
Confidence 0000000011 12 788999998 7899999999876 4555554432222122222323 2233
Q ss_pred HHHHHhccHHHHH-----HHHHHHHHHHHHHHHHHc----CCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEe
Q 012104 301 VALKQASTPAFKA-----YAKQVKANAVALGNYLTG----KGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITV 371 (471)
Q Consensus 301 ~al~~~~~~~~~~-----~~~~~~~na~~l~~~L~~----~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 371 (471)
.++.. .++.+ ..+.+.++.+.+.+.|.+ .++.+. .+.++.++|+++...+++..++.+.|.++||.+
T Consensus 291 ~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~-~p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v 366 (416)
T PRK09440 291 EMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIH-KPEGAIFLWLWFKDLPITTEELYQRLKARGVLV 366 (416)
T ss_pred HHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEe-cCCCceEEEEECCCCCCCHHHHHHHHHHCCEEE
Confidence 33432 12222 233334455556666654 245543 445677889998653457778888889999999
Q ss_pred ccCCcCCCCCC----CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 372 NKNAVFGDSSA----LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 372 ~~~~~p~~~~~----~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+++.++.... ...+++||++.. .++++++..+.|.+++..
T Consensus 367 ~pg~~F~~~~~~~~~~~~~~iRis~~~------~~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 367 VPGHYFFPGLDEDWPHAHQCIRMNYVQ------DDEEIEKGIAILAEEVEK 411 (416)
T ss_pred echHhhCCCCccccCCcCceEEEEecC------CHHHHHHHHHHHHHHHHH
Confidence 98875532110 013589999842 267887777777776643
No 181
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=6.6e-20 Score=189.68 Aligned_cols=303 Identities=15% Similarity=0.064 Sum_probs=191.0
Q ss_pred HHHHHHHhcCCCCCCCceeee-cCChHHHHHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCcccee--ccceeEEE
Q 012104 82 CRSRALQTFHLDPTQWGVNVQ-PYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA--TSIYFESL 157 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~-~~sGt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~--~g~~~~~~ 157 (471)
.++++++++|++.+ ++. +++|+.++.+++.++ +++||+|++.++.|+.+.. .+.. ...+.+++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~---------~~~~~~~~~G~~~~ 183 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYRE---------VLKTYLKGQGIEVV 183 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHH---------HHHHHHHhCCcEEE
Confidence 34678999999864 343 455667888888887 4899999999988776532 1111 11234555
Q ss_pred eeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-CCCCCccccHHHHHHHHHHhCCEEEE--eccccchhhccccCCCCCC-
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDFRPKLIICG-GSAYPRDWDYARFRAVADKCGALLLC--DMAHISGLVAAQEAANPFE- 233 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~s~~g~~~d~~~i~~ia~~~g~~liv--D~a~~~glv~~g~~~~p~~- 233 (471)
.+++++ + .+|++++++.+. .++++|+++ .|++|...|+++|+++|+++|+++++ |.. ..|. .+.+..
T Consensus 184 ~v~~~~-~-~~d~~~l~~~i~-~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~-----~~~~~~~ 254 (447)
T PRK00451 184 EVPYED-G-VTDLEALEAAVD-DDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGL-----LKPPGEY 254 (447)
T ss_pred EecCCC-C-CCCHHHHHHhcC-CCeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-Hhcc-----CCCcccC
Confidence 666664 4 899999999886 468877754 68899999999999999999999998 533 2232 223333
Q ss_pred CccEEEeCCCCc-----CCCCCeEEEEeeCCCCC-CCCC--CC-----CCcccch-----HhhhhhcCCCCCCCCCcHHH
Q 012104 234 YCHIVTTTTHKS-----LRGPRAGMIFYRKGPKP-PKKG--QP-----EGAVYDF-----EDKINFAVFPSLQGGPHNHQ 295 (471)
Q Consensus 234 ~aDiv~~s~~K~-----l~GprgG~i~~~~~~~~-~~~~--~~-----~i~~~~l-----~~~i~~~~~~~~~g~p~~~~ 295 (471)
++|++++|.||+ ++||+.|++++++++.. .... |. .-..|.+ ...+.........+++....
T Consensus 255 ~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (447)
T PRK00451 255 GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALN 334 (447)
T ss_pred CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHH
Confidence 789999998986 78998899988764321 1000 00 0000000 00011100011112221112
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccC
Q 012104 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 296 iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~ 374 (471)
..+.+.++..+...++++..+++.++++++.+.|++. |++++ .+...+.+.+++. .+..++.+.|.+.||.+...
T Consensus 335 ~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~---~~~~~~~~~L~~~gi~~~~~ 410 (447)
T PRK00451 335 ALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLP---KPAEEVNEALLEKGILGGYD 410 (447)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecC---CCHHHHHHHHHhcCCCCCcc
Confidence 1222334555555678889999999999999999987 68775 2221122345552 35678888888888875321
Q ss_pred CcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 375 AVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 375 ~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
..+.. +...+.+|++++..++ ++|++++.+.|.+++
T Consensus 411 ~~~~~--~~~~~~~rvs~~~~~t----~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 411 LGRYY--PELGNHLLVCVTEKRT----KEDIDALVAALGEVL 446 (447)
T ss_pred ccccc--CCcCCEEEEecCCCCC----HHHHHHHHHHHHHHh
Confidence 11111 1123689999866554 799999999998754
No 182
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=5.5e-20 Score=184.39 Aligned_cols=316 Identities=15% Similarity=0.114 Sum_probs=204.4
Q ss_pred CeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-HH
Q 012104 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (471)
Q Consensus 33 ~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A 109 (471)
.++|..++|. .++.+.+++.+.+.. ..+||.. . ...+ ++.++++++++.+ +|..++|+ ++
T Consensus 21 ~~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~------~-~~~l----r~~ia~~~~~~~~----~i~it~Ga~~~ 83 (354)
T PRK06358 21 ILDFSANINPLGVPESLKQAITENLDK--LVEYPDP------D-YLEL----RKRIASFEQLDLE----NVILGNGATEL 83 (354)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc------c-HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 5788777765 378899988776532 1234321 1 1223 3567778888764 45556665 68
Q ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCC-CCCCCHHHHHHHhhhCCCcEEE-E
Q 012104 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSS-TGYIDYDKLEEKALDFRPKLII-C 187 (471)
Q Consensus 110 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~-~~~iD~~~le~~~~~~~pklIi-~ 187 (471)
+..++.++ .+ |+|++.+|.|+.+.. .+...| .+++.++.+.+ ++.+| +++.+.+. .++++|+ +
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~---------~~~~~g--~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~ 148 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYER---------ALKAFD--AEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLC 148 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHH---------HHHHcC--CeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEe
Confidence 88888876 44 689999999886642 112234 34555555533 45788 66666564 3688775 5
Q ss_pred c-CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCCC---Ccc--EEEeCCCCc--CCCCCeEEEEe
Q 012104 188 G-GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---YCH--IVTTTTHKS--LRGPRAGMIFY 256 (471)
Q Consensus 188 ~-~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~---~aD--iv~~s~~K~--l~GprgG~i~~ 256 (471)
+ +||+|..++. ++|.++|+++|++||+|++|. .+...+..++++. ..+ +++.|++|+ ++|.|.||+++
T Consensus 149 ~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~ 227 (354)
T PRK06358 149 NPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFM-DFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLT 227 (354)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCccc-ccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeec
Confidence 5 7899999975 566677889999999999986 6665543223222 112 789999999 58999999988
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
+++ .+.+.+.....+. +.+.....+...++.. ...+++..+.+.++.+.+.+.|++. |+.
T Consensus 228 ~~~--------------~~~~~~~~~~~~~---~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~ 288 (354)
T PRK06358 228 SNK--------------NLAEKLLQMREPW---SINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK 288 (354)
T ss_pred CCH--------------HHHHHHHHhCCCC---cchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 643 4555555433221 1122122222223321 1233667777788888999999886 766
Q ss_pred EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 336 LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.. +. ..++|+.+.+ ..++.+.|.++||.+.++..++ ...++++||++. ..++++++.+.++++
T Consensus 289 ~~~-~~-g~f~~~~~~~----~~~~~~~l~~~gI~v~~~~~f~---~~~~~~iRls~~-------~~~~~~~l~~~l~~~ 352 (354)
T PRK06358 289 VYK-PS-VNFIFFKLEK----PIDLRKELLKKGILIRSCSNYR---GLDENYYRVAVK-------SREDNKKLLKALEVI 352 (354)
T ss_pred EcC-Cc-ceEEEEEcCc----hHHHHHHHHHCCeEEEECCCCC---CCCCCEEEEEeC-------CHHHHHHHHHHHHHH
Confidence 643 33 3467887752 3678778888999999876542 123478999972 268999999999876
Q ss_pred H
Q 012104 416 V 416 (471)
Q Consensus 416 l 416 (471)
+
T Consensus 353 ~ 353 (354)
T PRK06358 353 L 353 (354)
T ss_pred h
Confidence 5
No 183
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.88 E-value=1.2e-20 Score=189.02 Aligned_cols=336 Identities=14% Similarity=0.107 Sum_probs=204.7
Q ss_pred eeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCC-CCCc---chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHH
Q 012104 34 IELIASENFTSFAVIEALGSALTNKYSEGMPGNR-YYGG---NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPA 109 (471)
Q Consensus 34 i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r-~~~g---~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A 109 (471)
+++.|++..+|++|++++...+.+ |. +++.. |..+ .++.+.++ .+++.++++||++.++ .+.+.++|||.|
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~~-~vvf~~gs~T~a 75 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDNY-KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCCc-eEEEEcCCchHH
Confidence 468899999999999999988754 21 33321 1112 34556665 4789999999984332 244434568999
Q ss_pred HHHHHHHhcC---CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCH-HHHHHHhhhCCCcEE
Q 012104 110 NFAAYTAVLE---PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDY-DKLEEKALDFRPKLI 185 (471)
Q Consensus 110 ~~~~~~all~---pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~-~~le~~~~~~~pklI 185 (471)
+.+++.++++ +||.|+.. .+.|.+. ......|..++. ++.+.+....++ +..+..+ ..++|+|
T Consensus 76 ~~~~~~~l~~~~~~~~~i~~g------~~~~~~~----~~a~~~g~~~~~--~~~~~~g~~~~~~~~~~~~~-~~~~~lV 142 (355)
T cd00611 76 FAAVPLNLLGDKGTADYVVTG------AWSAKAA----KEAKRYGGVVVI--VAAKEEGKYTKIPDVETWDL-APDAAYV 142 (355)
T ss_pred HHHHHHhcCCCCCeEEEEECC------HHHHHHH----HHHHhcCCCcEE--EecccccCCCCCCCHhhcCC-CCCCCEE
Confidence 9999999987 55555432 1212110 001122433333 333322112132 2222223 3578888
Q ss_pred EEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCC
Q 012104 186 ICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP 262 (471)
Q Consensus 186 i~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~ 262 (471)
.+. .|.+|..++ ++++.+|+++++|++|++|. .|..++..|++++|.||++ ||.| |+++.+++...
T Consensus 143 ~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~-----~~idv~~~~~~~ss~~K~l-GP~G~g~l~~~~~~~~ 211 (355)
T cd00611 143 HYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILS-----RPIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKDLLG 211 (355)
T ss_pred EEeCCcccccEEcc-----eecccCCCeEEEEccccccC-----CCCCHHHhCEEEeeccccc-CCCceEEEEECHHHHh
Confidence 765 456777532 56666999999999998773 3444444567778899976 7987 88888764321
Q ss_pred -CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcC-Cce-Eee
Q 012104 263 -PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GYS-LVT 338 (471)
Q Consensus 263 -~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~-g~~-i~~ 338 (471)
..+..+.. +++....+. .+ ..++|+.+.+.++..|++.+... +++...++..++++++.+.|++. |+. ...
T Consensus 212 ~~~~~~~~~--~~~~~~~~~--~~-~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~ 286 (355)
T cd00611 212 KARKITPSM--LNYKTHADN--NS-LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPV 286 (355)
T ss_pred hcccCCCCc--ccHHHHHhc--CC-CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCC
Confidence 11111111 111111111 11 24789999999999999998877 68999999999999999999998 852 111
Q ss_pred CCC-CCeeEEEEccCCCC-CHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 339 GGT-ENHLVLWDLRPLGL-TGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 339 ~~~-~~~~~~v~~~~~~~-~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.+. ... .++.|...++ ...++...+.+.|+.+..+ .. ..+.+|+|+..+++ ++|++++.++|.++
T Consensus 287 ~~~~rs~-~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~----~~---~~g~vR~S~~~~nt----~edi~~l~~al~~~ 353 (355)
T cd00611 287 DKRARSR-MNVPFRLGKEELEKEFLKEAEAAGMIGLKG----HR---SVGGIRASIYNALS----LEGVQALADFMKEF 353 (355)
T ss_pred CHHHcCc-eEEEEEcCChhhhHHHHHHHHHCCCcccCC----Cc---ccCeEEEEccCCCC----HHHHHHHHHHHHHH
Confidence 111 121 2233332232 1144445777889964332 11 23689999976655 89999999998874
No 184
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=7.9e-20 Score=199.55 Aligned_cols=308 Identities=16% Similarity=0.144 Sum_probs=206.1
Q ss_pred HHHHHHHHhcCCCCCCCceeeecCChHH---HHHHHHHHhcCC-CC----EEEEeCCCCCCcccccccccCCccceeccc
Q 012104 81 LCRSRALQTFHLDPTQWGVNVQPYSGSP---ANFAAYTAVLEP-HD----RIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 81 ~~~~~~~~lfg~~~~~~~~~v~~~sGt~---A~~~~~~all~p-GD----~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.+++++++++|++. +.+++.+|++ |++.++.+++++ || +|+++...|+.... +..+.|
T Consensus 572 ~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a---------~a~~~G- 637 (993)
T PLN02414 572 DLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA---------SAAMCG- 637 (993)
T ss_pred HHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH---------HHHHCC-
Confidence 46789999999965 7788888765 888889999876 88 89999888775431 222334
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc-CCC-CCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG-GSA-YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~-~s~-~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
++++.++.+ +++.+|+++|++++.++ ++++|++. .|. .|...|+++|.++|+++|+++++|++|..++.. .
T Consensus 638 -~~vv~v~~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~---l 712 (993)
T PLN02414 638 -MKIVVVGTD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVG---L 712 (993)
T ss_pred -CEEEEeccC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccC---c
Confidence 566666666 56899999999999752 45676654 455 456667999999999999999999999866521 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC------eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCC----CcHHHH-
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR------AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG----PHNHQI- 296 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr------gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~----p~~~~i- 296 (471)
..|.+ ++||+++|.||+|.||. .|++.+++.+.+..++..-...-.+ +++.. +...|+ +..+..
T Consensus 713 ~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~---~~r~~-~s~iGt~~~a~~g~al~ 788 (993)
T PLN02414 713 TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGI---PRPEK-TQPLGTISAAPWGSALI 788 (993)
T ss_pred CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCc---ccccC-CCCcCCccchhhhhHHH
Confidence 33444 89999999999988776 3788887765443222110000000 11000 111122 222221
Q ss_pred HHHHH-HHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC---CCCeeEEEEccC----CCCCHHHHHHHHhhcC
Q 012104 297 GALAV-ALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG---TENHLVLWDLRP----LGLTGNKVEKLCDLCN 368 (471)
Q Consensus 297 aa~a~-al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~---~~~~~~~v~~~~----~~~~~~~~~~~L~~~g 368 (471)
+..+. -+..+..+++++..++...|+.++++.|.+ ++.+...+ ..-|-+.+++.. .|++..++.+.|.+.|
T Consensus 789 l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~G 867 (993)
T PLN02414 789 LPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYG 867 (993)
T ss_pred HHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcC
Confidence 11122 234445567888889999999999999987 55553322 222445566652 2467788988888999
Q ss_pred eEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 369 ITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 369 I~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
|....-++| ..+.+||...... +++|+++++++|..+..+..++
T Consensus 868 ihapt~~~p------v~~~lmiepTE~~----skeelDrf~~al~~i~~e~~~~ 911 (993)
T PLN02414 868 FHAPTMSWP------VPGTLMIEPTESE----SKAELDRFCDALISIREEIADI 911 (993)
T ss_pred cEEeeeccc------cCCEEEEEeeeeC----CHHHHHHHHHHHHHHHHHHHHH
Confidence 987553322 2578999875554 4899999999998887766544
No 185
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.87 E-value=1.2e-19 Score=185.77 Aligned_cols=299 Identities=17% Similarity=0.127 Sum_probs=195.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---------cCCCCEEEEeCCCCCCcccccccccCC
Q 012104 74 FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---------LEPHDRIMGLDLPSGGHLTHGYYTSGG 144 (471)
Q Consensus 74 ~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---------l~pGD~Vl~~~~~~~g~~s~~~~~~~g 144 (471)
...++| +.+++++|+++ .+.++|||.|+.+++.++ ++|||+|++++++|.+...
T Consensus 64 ~~~~fe----~~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~-------- 126 (438)
T PRK15407 64 FNDAFE----KKLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN-------- 126 (438)
T ss_pred hHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------
Confidence 345565 56888999875 366788999999998876 5899999999988875532
Q ss_pred ccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhc
Q 012104 145 KKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 145 ~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
.+...| .+++.++++++++.+|++.+++.+. .++|+|++.+ ++|...|+++|.++|+++|++||+|++|+.|..+
T Consensus 127 -~v~~~G--~~pv~vdvd~~~~~id~~~le~~i~-~~tkaVi~~~-~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~ 201 (438)
T PRK15407 127 -PIIQNG--LVPVFVDVELPTYNIDASLLEAAVS-PKTKAIMIAH-TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTY 201 (438)
T ss_pred -HHHHcC--CEEEEEecCCCcCCcCHHHHHHHcC-cCCeEEEEeC-CCCChhhHHHHHHHHHHCCCEEEEECccchhhhc
Confidence 122333 4666777776788999999999886 4789888664 4677889999999999999999999999999877
Q ss_pred cccCCCCCCCccEEEeCCC--CcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC------------------
Q 012104 225 AQEAANPFEYCHIVTTTTH--KSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF------------------ 284 (471)
Q Consensus 225 ~g~~~~p~~~aDiv~~s~~--K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~------------------ 284 (471)
.|..... ..|+.++||| |.+....||+++++++ ++.+++.....
T Consensus 202 ~g~~~G~--~gd~~~fSf~~~k~~~~geGG~l~t~d~--------------~l~~~~~~~~~~G~~~~~~~~~~~~~~~~ 265 (438)
T PRK15407 202 DGRMTGT--FGDIATLSFYPAHHITMGEGGAVFTNDP--------------LLKKIIESFRDWGRDCWCAPGCDNTCGKR 265 (438)
T ss_pred CCeeeec--cCceEEEeCCCCCCccccCceEEEECCH--------------HHHHHHHHHHHhCcccccccccccccccc
Confidence 6643222 3488888887 5576667999999875 33322211000
Q ss_pred --------------------CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-C-ceEee--CC
Q 012104 285 --------------------PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G-YSLVT--GG 340 (471)
Q Consensus 285 --------------------~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g-~~i~~--~~ 340 (471)
.|+. .-.....||+ ++.++ ..+++..++..++++++.+.|.+. | +.+.. .+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~G~n-~rmsel~AAi--g~~qL--~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~ 340 (438)
T PRK15407 266 FGWQLGELPFGYDHKYTYSHLGYN-LKITDMQAAI--GLAQL--EKLPGFIEARKANFAYLKEGLASLEDFLILPEATPN 340 (438)
T ss_pred cccccccccccccccccccccccc-cCccHHHHHH--HHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCC
Confidence 0110 0112223333 33333 357788888899999999999865 3 22211 11
Q ss_pred C-CC-eeEEEEccC-CCCCHHHHHHHHhhcCeEeccCCc-CCCCCCC-----------CCC----eeE-EecCCCCCcCC
Q 012104 341 T-EN-HLVLWDLRP-LGLTGNKVEKLCDLCNITVNKNAV-FGDSSAL-----------APG----GVR-IGTPAMTSRGL 400 (471)
Q Consensus 341 ~-~~-~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~-p~~~~~~-----------~~~----~iR-ig~~~~t~~g~ 400 (471)
. .+ |.+.+.+.+ .+.+.+++.+.|.+.||.++.... |.+..|. .+. .-| |++|. ..++
T Consensus 341 ~~~~~~~~~i~~~~~~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~--~~~l 418 (438)
T PRK15407 341 SDPSWFGFPITVKEDAGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGV--YPGL 418 (438)
T ss_pred CeeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecC--CCCC
Confidence 1 11 223333332 246788999999999998765432 2111110 000 001 23322 2357
Q ss_pred CHHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~ 417 (471)
+++|+++|++.|.++++
T Consensus 419 ~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 419 TEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 89999999999988764
No 186
>PLN03032 serine decarboxylase; Provisional
Probab=99.87 E-value=1.4e-19 Score=180.50 Aligned_cols=272 Identities=18% Similarity=0.177 Sum_probs=186.8
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCC-CceeeecCChHHHHHHHHHHhc--C
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQ-WGVNVQPYSGSPANFAAYTAVL--E 119 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~-~~~~v~~~sGt~A~~~~~~all--~ 119 (471)
..+.+++++...+.+.+ |.|+..+..| ....++|+.+++++++++|++.++ || +++++||+||+.++.+.. .
T Consensus 35 ~~~~~~~~~~~~~~~~~--gnP~s~~~~g-~~a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~al~~ar~~~ 109 (374)
T PLN03032 35 FDYGELSQLMKYSINNL--GDPFIESNYG-VHSRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLHGILVGREVF 109 (374)
T ss_pred cChHHHHHHHHhcccCC--CCCcccCCCC-ccHHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHHHHHHHHHhC
Confidence 34567888887776655 6776643323 235678888999999999998654 43 557888999988877643 3
Q ss_pred CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEE--cCCCCCcc
Q 012104 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIIC--GGSAYPRD 195 (471)
Q Consensus 120 pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~--~~s~~g~~ 195 (471)
+++.|++...+|.+.. +.+...+... ..++++ .++.+|+++|++++.+. +|.+|++ +.+.+|.+
T Consensus 110 ~~~~vi~s~~~H~Sv~---------kaa~~lg~~~--~~V~~d-~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i 177 (374)
T PLN03032 110 PDGILYASRESHYSVF---------KAARMYRMEA--VKVPTL-PSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV 177 (374)
T ss_pred CCcEEEeCCCceeHHH---------HHHHHcCCCC--eEeeeC-CCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC
Confidence 5678888776654432 1223344433 345566 56899999999999753 4667764 47889999
Q ss_pred ccHHHHHHHHHHhC-----CEEEEeccccchhhcc-c-cCCCCC-CCccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCC
Q 012104 196 WDYARFRAVADKCG-----ALLLCDMAHISGLVAA-Q-EAANPF-EYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKG 266 (471)
Q Consensus 196 ~d~~~i~~ia~~~g-----~~livD~a~~~glv~~-g-~~~~p~-~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~ 266 (471)
.|+++|+++|+++| +|+++|++++.+.+.- . .....+ .++|.++.|+||++..|.| |+++++++.......
T Consensus 178 dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~ 257 (374)
T PLN03032 178 DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQ 257 (374)
T ss_pred CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhcc
Confidence 99999999999996 5999999998554321 1 011122 2689999999998755987 889888742110000
Q ss_pred CCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC
Q 012104 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG 340 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~ 340 (471)
.. .+ +.. ..++..|+-.-...+++..+++.....++.+..++..+++++|.+.|++.|+.++..+
T Consensus 258 --~~---~Y---l~~-~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~p 322 (374)
T PLN03032 258 --NV---EY---LNS-RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLNE 322 (374)
T ss_pred --CC---cc---cCC-CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEECC
Confidence 00 01 111 1123455544455566777888887789999999999999999999999999876544
No 187
>PRK15029 arginine decarboxylase; Provisional
Probab=99.86 E-value=4.3e-20 Score=196.53 Aligned_cols=298 Identities=15% Similarity=0.065 Sum_probs=201.4
Q ss_pred HHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 81 ~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
.+++.++++||++... ..+++.|.+|.++++++++|||+|++...+|-+.+ |+ +.++|. .++++.
T Consensus 209 eAq~~aA~~fgA~~t~----FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~-~a--------l~L~ga--~Pvyl~ 273 (755)
T PRK15029 209 ESEKYAARVFGADRSW----SVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE-QG--------LILTGA--KPVYMV 273 (755)
T ss_pred HHHHHHHHHhCCCcEE----EEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCC--eEEEec
Confidence 4678899999999852 32344456999999999999999999996665443 22 334453 333321
Q ss_pred ec-CCC---CCCC-----HHHHHHHhhhC---------CCcEE-EEcCCCCCccccHHHHHHHHHHhCCEEEEeccccch
Q 012104 161 VN-SST---GYID-----YDKLEEKALDF---------RPKLI-ICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 161 v~-~~~---~~iD-----~~~le~~~~~~---------~pklI-i~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
.. .+. +.++ ++.+++.++++ +|+++ +++++-+|...|+++|+++|+++|++|++|+||++.
T Consensus 274 P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECccccc
Confidence 11 111 2344 99999998653 22244 466888999999999999999999999999999988
Q ss_pred hhccccCC--CCC-------CCcc-EEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCC
Q 012104 222 LVAAQEAA--NPF-------EYCH-IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG 290 (471)
Q Consensus 222 lv~~g~~~--~p~-------~~aD-iv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~ 290 (471)
+.+....| +++ .++| +++-|+||+|++.. ++++..+..-.. + + .++++.+..-...++
T Consensus 354 ~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~-------i---d-~~r~~~~l~~~qSTS 422 (755)
T PRK15029 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGA-------I---N-FSRFNQAYMMHATTS 422 (755)
T ss_pred cccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccc-------c---C-HHHHHHHHHHHcCCC
Confidence 77766554 455 3688 99999999999985 467766442000 1 2 245555433333578
Q ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-C------------------------------------
Q 012104 291 PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G------------------------------------ 333 (471)
Q Consensus 291 p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g------------------------------------ 333 (471)
|+...+|++.+|-.++..+.-++..++..+.+..+++.+.+. +
T Consensus 423 PSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 502 (755)
T PRK15029 423 PLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKL 502 (755)
T ss_pred cHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhh
Confidence 999999999988887754234567777888888888888654 2
Q ss_pred ------ceEeeCC---------------CCCeeEEEEccCCCCCHH---------HHHHHHhhcCeEeccCCcCCCCCCC
Q 012104 334 ------YSLVTGG---------------TENHLVLWDLRPLGLTGN---------KVEKLCDLCNITVNKNAVFGDSSAL 383 (471)
Q Consensus 334 ------~~i~~~~---------------~~~~~~~v~~~~~~~~~~---------~~~~~L~~~gI~v~~~~~p~~~~~~ 383 (471)
+.++..+ -|.--+++.++..|.+|. ++.+.|+++||.+....
T Consensus 503 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~-------- 574 (755)
T PRK15029 503 LTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT-------- 574 (755)
T ss_pred hccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC--------
Confidence 2222110 012224455544455666 89999999999997642
Q ss_pred CCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 384 APGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 384 ~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
...+=+ +.+.|.++++++++.+.|.+.-+
T Consensus 575 -~~~vL~----l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 575 -DFQIMF----LFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred -CCeEEE----EeCCCCCHHHHHHHHHHHHHHHH
Confidence 122222 44557778999999998887633
No 188
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.86 E-value=7.8e-20 Score=186.17 Aligned_cols=348 Identities=16% Similarity=0.173 Sum_probs=200.2
Q ss_pred cccChHHHHHHHHHHHh--ccCCeeEecC----CCC-Cc--HHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHH
Q 012104 13 ETVDPEIHDLIEKEKRR--QCRGIELIAS----ENF-TS--FAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCR 83 (471)
Q Consensus 13 ~~~d~~~~~~~~~e~~~--~~~~i~li~s----~n~-~s--~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~ 83 (471)
...++.....+....++ ..+.|+|..+ ++. .+ +.+.+++...+......+|+. ......+.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~------~~G~~~lR~aia 79 (396)
T PRK09257 6 EAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLP------IEGLAAYRQAVQ 79 (396)
T ss_pred CCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCC------CCCCHHHHHHHH
Confidence 34444333334433333 3467888665 232 23 677888766543221112322 112223333333
Q ss_pred HHHHHhcCC--CCCCCceeeecCCh-HHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEe
Q 012104 84 SRALQTFHL--DPTQWGVNVQPYSG-SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (471)
Q Consensus 84 ~~~~~lfg~--~~~~~~~~v~~~sG-t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~ 158 (471)
+++.+..+. +.+. +.|..++| ++|+.+++.++ ++|||+|++.+|.|.++.. .+...| .+++.
T Consensus 80 ~~~~~~~~~~~~~~~--i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~---------~~~~~g--~~~v~ 146 (396)
T PRK09257 80 ELLFGADSPALAAGR--VATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRA---------IFEAAG--LEVKT 146 (396)
T ss_pred HHhcCCCCcccccCe--EEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHH---------HHHHcC--CcEEE
Confidence 444333332 2321 22244555 57998888665 5899999999999988753 123344 35555
Q ss_pred eee-cCCCCCCCHHHHHHHhhhCCC--cEEEEc--CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcc-ccCC
Q 012104 159 YKV-NSSTGYIDYDKLEEKALDFRP--KLIICG--GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAA-QEAA 229 (471)
Q Consensus 159 ~~v-~~~~~~iD~~~le~~~~~~~p--klIi~~--~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~-g~~~ 229 (471)
++. +++++.+|++.+++.++..++ ++++++ +||+|..++.+ +|.++|+++|++||+|++|. ++.+. +..+
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~l~~~~~~~~ 225 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQ-GFGDGLEEDA 225 (396)
T ss_pred EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccc-ccccchHHHH
Confidence 555 334578999999998865434 344433 79999998865 55678899999999999986 55542 1111
Q ss_pred CCC---C-Ccc--EEEeCCCCcC--CCCCeEEEEe--eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHH
Q 012104 230 NPF---E-YCH--IVTTTTHKSL--RGPRAGMIFY--RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGAL 299 (471)
Q Consensus 230 ~p~---~-~aD--iv~~s~~K~l--~GprgG~i~~--~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~ 299 (471)
.++ . ..+ |+++|++|++ +|.|.||+++ +.+- .+. .+...+........ +++......++
T Consensus 226 ~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~--------~~~--~~~~~~~~~~~~~~-~~~~~~~q~~~ 294 (396)
T PRK09257 226 YGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE--------EAD--RVLSQLKATIRTNY-SNPPAHGAAIV 294 (396)
T ss_pred HHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH--------HHH--HHHHHHHHHhhhhc-CCCcHHHHHHH
Confidence 111 1 112 7899999994 5999999974 2210 000 12222222211111 22222222223
Q ss_pred HHHHHHh-----ccHHHHHHHHHHHHHHHHHHHHHHcCC----ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeE
Q 012104 300 AVALKQA-----STPAFKAYAKQVKANAVALGNYLTGKG----YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNIT 370 (471)
Q Consensus 300 a~al~~~-----~~~~~~~~~~~~~~na~~l~~~L~~~g----~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 370 (471)
+..+..- .....++..+++.++.+.+.+.|++.+ +.+. .+.++.++|+.+ +.+.+.+++++.||.
T Consensus 295 ~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~-~p~gg~~~w~~l-----~~~~~~~l~~~~~V~ 368 (396)
T PRK09257 295 ATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFI-ARQRGMFSYSGL-----TPEQVDRLREEFGVY 368 (396)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cccceEEEecCC-----CHHHHHHHHHcCCEE
Confidence 2233211 012334566677788888999998874 4442 345677888865 345678888999998
Q ss_pred eccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 371 VNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 371 v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.+ .+ ||++.+ ..+++++++++.|+++
T Consensus 369 ~~p------------~~-ri~~~~-----~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 369 AVG------------SG-RINVAG-----LNESNIDYVAEAIAAV 395 (396)
T ss_pred EcC------------CC-eEEEee-----CCHHHHHHHHHHHHhh
Confidence 843 12 999844 3478899988888765
No 189
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=1e-19 Score=173.67 Aligned_cols=318 Identities=20% Similarity=0.204 Sum_probs=199.2
Q ss_pred cCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHH
Q 012104 38 ASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT 115 (471)
Q Consensus 38 ~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~ 115 (471)
.|+|.. +|+++++|...-. .+..-||..++...+| ++++++||.. ..++..|||+||.+++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e----~~~ae~~g~~-----a~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALE----QRIAELFGKE-----AALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHH----HHHHHHhCCc-----eEEEecCccHHHHHHHH
Confidence 467764 7999999975321 1223466667777777 6788999984 35677899999999999
Q ss_pred HhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC-CCCCCCHHHHHHHhhh----C--CCcEEEEc
Q 012104 116 AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS-STGYIDYDKLEEKALD----F--RPKLIICG 188 (471)
Q Consensus 116 all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~-~~~~iD~~~le~~~~~----~--~pklIi~~ 188 (471)
+.++||+.|++-.-.| + +.-++|.. .+.+. ..++.+.+ .++.+++|+|+..+.. + +|.+++.+
T Consensus 69 ~~~~~~~~vi~~~~aH---i---~~~E~Ga~-~~~~~---~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~ 138 (342)
T COG2008 69 AHCQPGESVICHETAH---I---YTDECGAP-EFFGG---GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN 138 (342)
T ss_pred HhcCCCCeEEEecccc---c---eecccCcH-HHHcC---CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee
Confidence 9999999999987443 2 22222222 22221 12333333 6799999999997763 1 34555544
Q ss_pred -CCCCCccccHHHHH---HHHHHhCCEEEEeccccc-hhhccccCCCCCC-CccEEEeCCCCcCCCCCeEEEEeeCCCCC
Q 012104 189 -GSAYPRDWDYARFR---AVADKCGALLLCDMAHIS-GLVAAQEAANPFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 189 -~s~~g~~~d~~~i~---~ia~~~g~~livD~a~~~-glv~~g~~~~p~~-~aDiv~~s~~K~l~GprgG~i~~~~~~~~ 262 (471)
++..|.++++++|. ++|+++|+.|+.|+|... .+++.|.....+. ++|+++++++|.+..|-+++++.+.
T Consensus 139 ~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~---- 214 (342)
T COG2008 139 TATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR---- 214 (342)
T ss_pred ccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH----
Confidence 56679999887654 789999999999999764 3444441111223 8999999999998777777777776
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH--HHHHHHHHHcC-CceEeeC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN--AVALGNYLTGK-GYSLVTG 339 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~n--a~~l~~~L~~~-g~~i~~~ 339 (471)
++.++.+...-.. |+ .+.+.--++++...+++..+ -+.....+| ++.|++.|.+. |+++..+
T Consensus 215 -----------~~~~~a~~~rK~~--Gg-l~~k~r~laA~~~~~l~~~~-~~~~~~Han~mA~~La~~~~~~~G~~~~~~ 279 (342)
T COG2008 215 -----------DFAKRARRWRKRA--GG-LMRKARFLAAQGLYALEDDV-WRLAADHANAMAARLAEGLEAKPGVKLAFP 279 (342)
T ss_pred -----------HHHHHHHHHHHHh--cc-cHhhhhHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHhhhhcCCceeccC
Confidence 5555443321111 11 11121122222333333232 122334556 99999999955 9999755
Q ss_pred CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 340 GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 340 ~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.+++++++++...++.......+...|+.+... ...+|+- |++..+++|++++...+...
T Consensus 280 -~~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~----------~~~vRfv----ts~a~~~edv~~~~~~~~~~ 340 (342)
T COG2008 280 -VETNMVFVRLPESAIEALRLAGALFYRGVLIGAH----------GEIVRFV----TSWATSEEDVDELVAAIKAL 340 (342)
T ss_pred -CcccEEEEECChHHHHHHHhhchhheeeeeccCC----------CceEEEE----eeccCCHHHHHHHHHHHHHh
Confidence 6677888887643222222233333333333211 0258984 45666699999999888764
No 190
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.86 E-value=1.1e-19 Score=183.97 Aligned_cols=225 Identities=16% Similarity=0.183 Sum_probs=152.3
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccc
Q 012104 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (471)
Q Consensus 62 g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 141 (471)
||.-.|| ++...+.+| +++++++|.++ .+.++||+.|+.+++.++++|||+|++.++.|++.+....
T Consensus 50 ~~~y~r~--~~p~~~~le----~~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~-- 116 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLE----GRIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLE-- 116 (391)
T ss_pred CCceeCC--CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHH--
Confidence 4433443 344566777 57889999876 3668899999999999999999999999998876542100
Q ss_pred cCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 142 ~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
..+...| .++..+++ -|++++++.+. .++++|++. .||+|...|+++|.++|+++|+++++|++|.
T Consensus 117 ---~~~~~~G--~~~~~vd~------~d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a 184 (391)
T TIGR01328 117 ---HALTKFG--IQVDFINM------AIPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFA 184 (391)
T ss_pred ---HHHhcCC--eEEEEECC------CCHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 0111223 34444432 27999999886 478888753 6789999999999999999999999999997
Q ss_pred chhhccccCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHH
Q 012104 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (471)
Q Consensus 220 ~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ 295 (471)
.+.. ..|+. ++|++++|++|++.|+. ||+++.++ ++.+++.........|+.....
T Consensus 185 ~~~~-----~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~---------------~li~~l~~~~~~~~~g~~l~~~ 244 (391)
T TIGR01328 185 TPML-----TNPVALGVDVVVHSATKYIGGHGDVVAGLICGKA---------------ELLQQIRMVGIKDMTGSVISPF 244 (391)
T ss_pred hhcc-----CCchhcCCCEEEccccccccCCCCceEEEEEcCH---------------HHHHHHHHHHHHhCCCCCCCcH
Confidence 6532 23454 79999999999987653 68887765 4444444211111112222222
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 296 iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
.+++ +++.+. .+....++..+|++.+++.|++. ++.
T Consensus 245 ~a~l--~l~~L~--tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 245 DAWL--ILRGLK--TLNIRMKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHH--HHhCcC--cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 2222 233332 34566788899999999999886 443
No 191
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=2.3e-19 Score=180.66 Aligned_cols=213 Identities=20% Similarity=0.223 Sum_probs=151.5
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| ++++++.|.+. .+.+.||++|+.+++.++++|||+|+++++.|++.+... .....
T Consensus 51 ~npt~~~Le----~~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~-------~~~~~ 114 (388)
T PRK08861 51 GNPNRGLLE----QTLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLF-------NTRAN 114 (388)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHH-------HHHHh
Confidence 345566676 57888999754 456778899999999999999999999999988653210 00011
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
..++++..+ + ..|++++++++.+ ++++|++. +||+|..+|+++|.++|+++|+++++|++|..++.
T Consensus 115 ~~gi~v~~v--d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~----- 182 (388)
T PRK08861 115 KGDFKVQFV--D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL----- 182 (388)
T ss_pred cCCeEEEEE--C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc-----
Confidence 122444444 2 3589999998864 78988854 68899999999999999999999999999986642
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al 303 (471)
..|++ ++|++++|+||++.||. ||+++++++ ++.+++.... ..|...+|. . +. ..+
T Consensus 183 ~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~--------------~~~~~~~~~~~~~G~~~~p~--~-a~--l~~ 243 (388)
T PRK08861 183 QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTK--------------EHAEELAWWGNCIGATGTPF--D-SY--MTL 243 (388)
T ss_pred CCCcccCCCEEEeecceeccCCCcceeEEEEecHH--------------HHHHHHHHHHhccCCCCChH--H-HH--HHH
Confidence 34566 79999999999999975 788887653 4555454321 112211221 1 11 234
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+.+. -+.-+.++..+|+..+++.|++.
T Consensus 244 rgl~--Tl~lR~~~~~~~a~~~a~~L~~~ 270 (388)
T PRK08861 244 RGIR--TLGARMRVHEESAQQILAYLQTQ 270 (388)
T ss_pred hcCC--CHHHHHHHHHHHHHHHHHHHHhC
Confidence 4443 35667888899999999999987
No 192
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=7.2e-20 Score=185.28 Aligned_cols=289 Identities=18% Similarity=0.153 Sum_probs=185.2
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +.+++++|.+. .+.+.||+.|+.+++.++++|||+|++.++.|++.... +...
T Consensus 59 ~~pt~~~Le----~~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~---------~~~~ 120 (386)
T PRK06767 59 GNPTVKLFE----ERMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGF---------LEVL 120 (386)
T ss_pred CCcchHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHH---------HHHH
Confidence 344556676 57889999764 46678999999999999999999999999888765321 1111
Q ss_pred c--ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccc
Q 012104 151 S--IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (471)
Q Consensus 151 g--~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g 226 (471)
. .+++.... ...|++++++.+.. ++|+|++. +||+|...|+++|.++|+++|+++++|++|+.+..
T Consensus 121 ~~~~gi~~~~~------~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~--- 190 (386)
T PRK06767 121 EEKFMITHSFC------DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL--- 190 (386)
T ss_pred HhhcCeEEEEe------CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc---
Confidence 1 11222111 23589999998864 78988754 78899999999999999999999999999975432
Q ss_pred cCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHH
Q 012104 227 EAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 227 ~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~a 302 (471)
..|+. ++|++++|++|++.|+. ||+++++++ .+.+..... .....+...... +++ +
T Consensus 191 --~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~--------------~i~~~~~~~-~~~~g~~~~~~~-a~l--~ 250 (386)
T PRK06767 191 --QRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR--------------ALAEKIRPM-RKDIGGIMAPFD-AWL--L 250 (386)
T ss_pred --CCchhcCCcEEEecCcceecCCCCceeEEEEeChH--------------HHHHHHHHH-HHHhCCCCCHHH-HHH--H
Confidence 23454 78999999999988764 799998873 222222111 111111112211 222 2
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCC----------CCCeeEEEEccCCCCCHHHHHHHHhhcCeEe
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGG----------TENHLVLWDLRPLGLTGNKVEKLCDLCNITV 371 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~----------~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v 371 (471)
+..+. .+....++..+|++.+++.|++. ++..+.-+ ..+.++.+++.....+...+.+.|+..++.+
T Consensus 251 ~~~L~--tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~ 328 (386)
T PRK06767 251 LRGLK--TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAV 328 (386)
T ss_pred HcCCC--cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEec
Confidence 33332 34567778899999999999987 66643311 1123566666421123456777888888887
Q ss_pred ccCCc------CCCC-----CC-------CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 372 NKNAV------FGDS-----SA-------LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 372 ~~~~~------p~~~-----~~-------~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+-|.+ |... ++ ..++-+||++ |+ ||.+.|.+-|.+++.
T Consensus 329 s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv------Gl--E~~~dl~~dl~~al~ 384 (386)
T PRK06767 329 SLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV------GL--ESWEDIVSDLEQALK 384 (386)
T ss_pred CCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe------cc--CCHHHHHHHHHHHHh
Confidence 76531 2110 00 1235688876 33 466666666666653
No 193
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=3.4e-19 Score=177.48 Aligned_cols=307 Identities=16% Similarity=0.105 Sum_probs=196.7
Q ss_pred CCeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-H
Q 012104 32 RGIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-P 108 (471)
Q Consensus 32 ~~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~ 108 (471)
+.+.|..++|. .++.+++++.+.+......+||.. | ...+ ++.+++++|++.+ +|..++|+ +
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----g---~~~l----r~~ia~~~~~~~~----~I~~t~G~~~ 83 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHI----T---SDPL----REAIAEFYGLDAE----NIAVGNGSDE 83 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCC----C---HHHH----HHHHHHHhCcCcc----eEEEcCCHHH
Confidence 45788777755 468888888776632212234321 1 1223 3567778888764 45556665 5
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-E
Q 012104 109 ANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-C 187 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~ 187 (471)
++..++.++ +||+|++.+|.|+.+.. .....| .++++++++ +++.+|++.+++.. .++++++ +
T Consensus 84 ~l~~~~~~~--~gd~V~v~~P~y~~~~~---------~~~~~g--~~~~~v~~~-~~~~~d~~~l~~~~--~~~~~v~~~ 147 (337)
T PRK03967 84 LISYLVKLF--EGKHIVITPPTFGMYSF---------YAKLNG--IPVIDVPLK-EDFTIDGERIAEKA--KNASAVFIC 147 (337)
T ss_pred HHHHHHHHh--CCCeEEEeCCChHHHHH---------HHHHcC--CeEEEeecC-CCCCcCHHHHHHhc--cCCCEEEEe
Confidence 777776665 89999999999875421 112334 355566655 34789999998865 3567665 4
Q ss_pred c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc-EEEeCCCCc--CCCCCeEEEEeeCCCCC
Q 012104 188 G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH-IVTTTTHKS--LRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 188 ~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD-iv~~s~~K~--l~GprgG~i~~~~~~~~ 262 (471)
+ +||+|..++.+++.++|+ +++++++|++|. .+... .....+. ... +++.|++|+ ++|.|.||+++++
T Consensus 148 ~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~---- 220 (337)
T PRK03967 148 SPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE---- 220 (337)
T ss_pred CCCCCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhccc-chHHHHhhCCCEEEEecchHhhcchhhhheeeecCH----
Confidence 4 789999999999999995 699999999996 44311 1111111 112 788999999 4789999999976
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTE 342 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~ 342 (471)
++.+.+.+...+. +.+.....+...++.. .+.+.+..+.+.++.+.+.+.|.+..+ +.+
T Consensus 221 -----------~~i~~~~~~~~~~---~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~-----~~~ 279 (337)
T PRK03967 221 -----------EIIDALYRIKPPF---SLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEYAY-----PSD 279 (337)
T ss_pred -----------HHHHHHHhhcCCC---CCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccCcC-----CCC
Confidence 5556565543322 1222233333334432 124455566667777788888876421 234
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+.++|+++. +.+.|.++||.+++. ++ ...+++||++. ..++.+++.+.|+++.+.
T Consensus 280 ~~~~~~~~~--------~~~~l~~~gi~v~~~--~~----~~~~~~Ri~~~-------~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 280 ANFLLLKLD--------AYDYLLENGIVVRKL--SG----RLEGHIRVTVG-------KREENDEFIKALKEIKEG 334 (337)
T ss_pred CcEEEEhHH--------HHHHHHHCCEEEEeC--CC----CCCCeEEEecC-------CHHHHHHHHHHHHHHHHh
Confidence 556787652 567777889999753 11 12468999973 267888999999876553
No 194
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=1.1e-19 Score=183.81 Aligned_cols=288 Identities=19% Similarity=0.151 Sum_probs=184.8
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+..+..+| +++++++|.++ + +.++||+.|+.+++.++++|||+|++..+.|++.+.-. . ..+...|
T Consensus 62 ~p~~~~le----~~lA~l~g~~~----a-v~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~--~---~~~~~~G 127 (389)
T PRK05968 62 NPTVRAFE----EMLAKLEGAED----A-RGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLF--E---TILKRMG 127 (389)
T ss_pred ChhHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH--H---HHHHHcC
Confidence 34456666 57889999876 3 55689999999999999999999999999887653210 0 0111223
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
.+++.+ + ..|++++++.+ .++|+|++. .++.+...|+++|.++|+++|+++++|++|+.+.. .
T Consensus 128 --~~v~~v--d----~~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~-----~ 192 (389)
T PRK05968 128 --VEVDYV--D----GRDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVF-----Q 192 (389)
T ss_pred --ceEEEe--C----CCCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhc-----c
Confidence 344433 2 23899999887 368888754 45566778999999999999999999999975542 2
Q ss_pred CCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHH
Q 012104 230 NPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305 (471)
Q Consensus 230 ~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~ 305 (471)
.|+. ++|++++|+||++.|| +||+++.++ ++.+++.....+...+.... ..+++ .+..
T Consensus 193 ~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~---------------~~~~~l~~~~~~~~g~~~~~-~~A~~--~l~~ 254 (389)
T PRK05968 193 RPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK---------------EHIARINAEAYPYLGAKLSP-FEAWL--LLRG 254 (389)
T ss_pred CchhcCCcEEEeeccccccCCCCeEEEEEEECH---------------HHHHHHHHHHHHhCCCCCCh-HHHHH--HHcc
Confidence 2444 7899999999999886 578887665 44444443222222122222 22222 2333
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcC-CceEee-CCCCC----------eeEEEEccCCCCCHHHHHHHHhhcCeEecc
Q 012104 306 ASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVT-GGTEN----------HLVLWDLRPLGLTGNKVEKLCDLCNITVNK 373 (471)
Q Consensus 306 ~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~-~~~~~----------~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 373 (471)
+. .+....++..++++.+++.|++. ++..+. ++..+ .++.+++.. +.+..++.+.|+..++.++-
T Consensus 255 L~--tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-~~~~~~f~~~L~~~~~~~s~ 331 (389)
T PRK05968 255 LR--TLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE-GIDVRAFADALKLFRLGVSW 331 (389)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC-HHHHHHHHHhCCccEEecCC
Confidence 32 35677788888999999999987 564433 32111 255566642 44556677888877777776
Q ss_pred CCc-----CCCC-------C----C--CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 374 NAV-----FGDS-------S----A--LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 374 ~~~-----p~~~-------~----~--~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
|.. |... . . ..++.||+|+. + ++.+.|.+-|.+++.
T Consensus 332 G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvG------l--E~~~dl~~dl~~al~ 385 (389)
T PRK05968 332 GGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVG------L--EGTEALWADLEQALA 385 (389)
T ss_pred CCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEec------c--CCHHHHHHHHHHHHH
Confidence 532 2110 0 0 11467999873 2 455566666666554
No 195
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=1.9e-19 Score=182.16 Aligned_cols=214 Identities=21% Similarity=0.213 Sum_probs=148.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.....+| +++++++|.+++ +.++||+.|+.+++.++++|||+|++.++.|++.+... . . .....
T Consensus 61 p~~~~Le----~~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~--~----~-~~~~~ 124 (388)
T PRK07811 61 PTRTALE----EQLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLI--D----K-VFTRW 124 (388)
T ss_pred ccHHHHH----HHHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHH--H----H-hCcCC
Confidence 4455666 678889998862 45679999999999999999999999999988653210 0 0 01111
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
+.++..+ + ..|++++++.+.+ ++|+|++. .||+|...|+++|+++|+++|++|++|++|+.+.. ..
T Consensus 125 gi~~~~~--d----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 192 (388)
T PRK07811 125 GVEYTPV--D----LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----QQ 192 (388)
T ss_pred CeEEEEe--C----CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----CC
Confidence 2333333 2 3589999998864 78988854 67899999999999999999999999999975532 23
Q ss_pred CCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCC-CCCCCCcHHHHHHHHHHHHH
Q 012104 231 PFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFP-SLQGGPHNHQIGALAVALKQ 305 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~-~~~g~p~~~~iaa~a~al~~ 305 (471)
|+. ++|++++|++|++.|| +||+++++++ ++.+++...... +...+| .. + +.++..
T Consensus 193 p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~--------------~l~~~~~~~~~~~g~~~s~--~~-a--~l~~~~ 253 (388)
T PRK07811 193 PLALGADVVVHSTTKYIGGHSDVVGGALVTNDE--------------ELDEAFAFLQNGAGAVPGP--FD-A--YLTLRG 253 (388)
T ss_pred chhhCCcEEEecCceeecCCCCcEEEEEEECCH--------------HHHHHHHHHHHhcCCCCCH--HH-H--HHHHhc
Confidence 555 7999999999999887 4798888764 455544322111 111111 11 1 123333
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 306 ASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 306 ~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
+. .+....++..+|++.+++.|++. ++.
T Consensus 254 L~--tl~~R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 254 LK--TLAVRMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 32 35567778889999999999876 443
No 196
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=2.8e-19 Score=177.74 Aligned_cols=271 Identities=13% Similarity=0.034 Sum_probs=177.5
Q ss_pred HHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~ 162 (471)
+.+++++|.+.. +|..++|+ +++..++. +++||+ |++.+|+|+.+.. .+...|. +++.++++
T Consensus 47 ~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~---------~~~~~G~--~v~~vp~~ 109 (332)
T PRK06425 47 DQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG---------YAFTHGI--RISALPFN 109 (332)
T ss_pred HHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH---------HHHHcCC--eEEEEeCC
Confidence 567788998863 46666666 58877776 578875 5566898876542 1233454 55555555
Q ss_pred CCCCCCCHHHHHHHhhhCCCcEEE-Ec-CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhccccCCCCC---C-
Q 012104 163 SSTGYIDYDKLEEKALDFRPKLII-CG-GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQEAANPF---E- 233 (471)
Q Consensus 163 ~~~~~iD~~~le~~~~~~~pklIi-~~-~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~~~~p~---~- 233 (471)
. ..+|.+.++ ..++|+|+ ++ +||+|..++.++ |.++|+++|++||+|++|. .+...+ .++.. +
T Consensus 110 ~--~~~~~~~l~----~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~-~~~~~~-~~~~~~~~~~ 181 (332)
T PRK06425 110 L--INNNPEILN----NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFI-DFVPNR-AEEDVLLNRS 181 (332)
T ss_pred c--ccCcHHHHh----hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchh-cccccc-chhHHHHhcc
Confidence 3 345655544 24788887 45 789999998655 4566788999999999986 554432 11111 1
Q ss_pred Ccc-EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 234 YCH-IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 234 ~aD-iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
+.. |++.|++|+ ++|.|.||+++++ ++.+.+.....+... ...+.. ++.......
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~---------------~li~~l~~~~~~~~~-----~~~~~~--~l~~~~~~~ 239 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDD---------------YNMKISRKITEPWSV-----CDPAID--FIRSIDLDY 239 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCH---------------HHHHHHHHcCCCCcc-----CHHHHH--HHHHhhhHH
Confidence 112 788999998 6899999999987 566656543222211 111111 122111112
Q ss_pred -HHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 311 -FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 311 -~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
.++..+.+.++.+.+.+.|++.|+.++..+ .+.++|+.+. +..++.+.|.++||.|.++..++. ...+++|
T Consensus 240 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~-~g~f~~~~~~----~~~~~~~~l~~~gi~v~~~~~f~~---~~~~~iR 311 (332)
T PRK06425 240 VAKHSLDIMENERSYLINNLEAMGFRAAGDP-SANFITFMIP----DAHDFYSYLLKNGILVRLLDDYEC---LGEQYIR 311 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEECCCC-CceEEEEEcC----CHHHHHHHHHHCCeEEEECCCCCC---CCCCEEE
Confidence 245667777888899999998888775333 3456788764 567787888889999988765431 1247999
Q ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 390 IGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 390 ig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
|++. ..++++++.++|.+++
T Consensus 312 is~~-------~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 312 IAIR-------RRSFNIKLVNALRNFL 331 (332)
T ss_pred EEeC-------CHHHHHHHHHHHHHHh
Confidence 9972 2689999999998754
No 197
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=2.1e-19 Score=182.93 Aligned_cols=223 Identities=11% Similarity=0.077 Sum_probs=154.0
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|.+. + +.++||++|+.+++.++++|||+|++.++.|+++... .... .....
T Consensus 74 ~~Pt~~~LE----~~lA~l~g~~~----~-l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~--~~~~--~~~~~ 140 (418)
T PLN02242 74 FNPTVLNLG----RQMAALEGTEA----A-YCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHAL--LAHF--LPRKC 140 (418)
T ss_pred CChhHHHHH----HHHHHHhCCCe----E-EEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHH--HHHh--hhhcc
Confidence 456666777 57889999886 3 4578999999999999999999999999988766320 0000 00112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.+ + ..|++++++++...++|+|++. +||+|.+.|+++|+++|+++|++|++|++|. .+..
T Consensus 141 G--~~~~~~--d----~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~---- 207 (418)
T PLN02242 141 N--ITTTFV--D----ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVL---- 207 (418)
T ss_pred C--ceEEEc--C----CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCC----
Confidence 2 233333 2 2489999998865358988854 7889999999999999999999999999995 3322
Q ss_pred CCCCC-CccEEEeCCCCcCCCC--C-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCC--CCCCCCcHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGP--R-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFP--SLQGGPHNHQIGALAVA 302 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gp--r-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~--~~~g~p~~~~iaa~a~a 302 (471)
.+.. ++|++++|++|++.|+ + ||++++++ ++.+.+...... ...|.+...+.|++. +
T Consensus 208 -~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~---------------~li~~l~~~~~~~~~~~g~~~~~~~A~l~-~ 270 (418)
T PLN02242 208 -SPARLGADVVVHSISKFISGGADIIAGAVCGPA---------------ELVNSMMDLHHGALMLLGPTMNPKVAFEL-S 270 (418)
T ss_pred -CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH---------------HHHHHHHHHhhhhhhccCCCCCHHHHHHH-H
Confidence 2333 6899999999997654 3 79998876 444444432110 122333333433332 2
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeC
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG 339 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~ 339 (471)
. .+. .+....++..+|++++++.|++.++++..+
T Consensus 271 ~-~l~--tl~~r~~~~~~~a~~la~~L~~~~~~V~yP 304 (418)
T PLN02242 271 E-RLP--HLSLRMKEHCRRAMEYAKRMKELGLKVIYP 304 (418)
T ss_pred c-CCC--cHHHHHHHHHHHHHHHHHHHHhCCCEEECC
Confidence 2 222 455667788999999999999998888654
No 198
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=7.6e-19 Score=174.73 Aligned_cols=304 Identities=16% Similarity=0.123 Sum_probs=196.3
Q ss_pred ccCCeeEecCCCCC--cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC---CCCCCCceeeecC
Q 012104 30 QCRGIELIASENFT--SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH---LDPTQWGVNVQPY 104 (471)
Q Consensus 30 ~~~~i~li~s~n~~--s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg---~~~~~~~~~v~~~ 104 (471)
.++.|.|..++|.. |+.+++++...+.......||.. ....+. +.+++.++ .+.+ +|..+
T Consensus 18 ~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~-------~~~~Lr----~aia~~~~~~~~~~~----~i~it 82 (335)
T PRK14808 18 KRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS-------PDEELI----EKILSYLDTDFLSKN----NVSVG 82 (335)
T ss_pred CCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-------ChHHHH----HHHHHHhCCCCCCcc----eEEEc
Confidence 35678998888754 78889988765432211112221 122333 44556666 5543 45556
Q ss_pred ChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCc
Q 012104 105 SGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 105 sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pk 183 (471)
+|+ +++..++.++ |.|++.+|+|.++.. .+...|. +++.++.++ ++.+|... + .+++
T Consensus 83 ~Ga~~~i~~~~~~~----d~v~v~~P~y~~~~~---------~~~~~g~--~~~~v~~~~-~~~~~~~~----~--~~~~ 140 (335)
T PRK14808 83 NGADEIIYVMMLMF----DRSVFFPPTYSCYRI---------FAKAVGA--KFLEVPLTK-DLRIPEVN----V--GEGD 140 (335)
T ss_pred CCHHHHHHHHHHHh----CcEEECCCCHHHHHH---------HHHHcCC--eEEEecCCC-cCCCChhH----c--cCCC
Confidence 665 6888888877 789999999887642 1233444 555565553 35555332 2 2457
Q ss_pred EEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc-EEEeCCCCc--CCCCCeEEEEee
Q 012104 184 LII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH-IVTTTTHKS--LRGPRAGMIFYR 257 (471)
Q Consensus 184 lIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD-iv~~s~~K~--l~GprgG~i~~~ 257 (471)
+|+ ++ +||+|..++.+++.+++ +++++|++|++|. .+. .....+.+. ... +++.|++|+ ++|.|.||++++
T Consensus 141 ~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~ 217 (335)
T PRK14808 141 VVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFH-GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSS 217 (335)
T ss_pred EEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhc-CCchHHHHHhCCCEEEEEechhhccCcccceEEEEeC
Confidence 776 44 78999999999999999 5799999999986 442 111111122 222 788999999 569999999998
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
+ ++.+.+.....+. +.+...+. +...++.. ...+++..+++.++.+.+.+.|++.|+++.
T Consensus 218 ~---------------~~~~~l~~~~~~~--~~~~~~q~-a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ 277 (335)
T PRK14808 218 E---------------KFIDAYNRVRLPF--NVSYVSQM-FAKVALDH--REIFEERTKFIVEERERMKSALREMGYRIT 277 (335)
T ss_pred H---------------HHHHHHHHhcCCC--CCCHHHHH-HHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCEEC
Confidence 7 5666665543222 22222233 33344542 124566667777788889999998898864
Q ss_pred eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 338 TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
. + .+.++|+.+.. .+..++.+.|.++||.|.. . ..++||++. ..++++++.+.|..
T Consensus 278 ~-~-~g~f~~~~l~~--~~~~~~~~~l~~~Gi~V~~----~------~~~~Risi~-------~~~~~~~~~~~l~~ 333 (335)
T PRK14808 278 D-S-RGNFVFIFMEK--EEKERLLEHLRAKNIAVRS----F------REGVRITIG-------KREENDMILKELEV 333 (335)
T ss_pred C-C-CCeEEEEeCCC--ccHHHHHHHHHHCCeEEEE----C------CCCeEEecC-------CHHHHHHHHHHHHh
Confidence 3 3 44567887752 3557788899999999973 1 257999972 26899999988853
No 199
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.85 E-value=3e-19 Score=182.30 Aligned_cols=267 Identities=18% Similarity=0.231 Sum_probs=165.5
Q ss_pred cCChHHHHHHHHH---HhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec-CCCCCCCHHHHHHHhh
Q 012104 103 PYSGSPANFAAYT---AVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN-SSTGYIDYDKLEEKAL 178 (471)
Q Consensus 103 ~~sGt~A~~~~~~---all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~-~~~~~iD~~~le~~~~ 178 (471)
+.+|+.|+.+++. ++++|||+|++.+|+|+++.. .+...|. +++.+++. ++++.+|++.+++.++
T Consensus 103 t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~---------~~~~~G~--~~~~v~l~~~~~~~~d~~~l~~~~~ 171 (404)
T PTZ00376 103 ALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN---------IFKSAGL--NVKEYRYYDPKTKGLDFDGMLEDLR 171 (404)
T ss_pred ccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH---------HHHHcCC--ceeeccccCcccCCcCHHHHHHHHH
Confidence 4455667766654 678999999999999988753 1233443 55566653 2457899999999986
Q ss_pred hCC--CcEEE-Ec-CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcccc---CCC--CCC-Cc-c-EEEeCCC
Q 012104 179 DFR--PKLII-CG-GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQE---AAN--PFE-YC-H-IVTTTTH 243 (471)
Q Consensus 179 ~~~--pklIi-~~-~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~---~~~--p~~-~a-D-iv~~s~~ 243 (471)
+.+ .++++ ++ +||+|..++.+ +|.++|+++|++||+|++|. ++.+.+. .++ .+. .. . |++.|++
T Consensus 172 ~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 172 TAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQ-GFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred hCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhc-CccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 433 35555 34 89999998865 45577899999999999986 6655321 111 111 12 2 8899999
Q ss_pred Cc--CCCCCeEEEE---eeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhc--c---HHHHH
Q 012104 244 KS--LRGPRAGMIF---YRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQAS--T---PAFKA 313 (471)
Q Consensus 244 K~--l~GprgG~i~---~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~--~---~~~~~ 313 (471)
|+ ++|.|.||++ .++++.+ .+.+.+.+...... +++......+.+.++..-. . ...++
T Consensus 251 K~~~~~GlRvG~~~~~~~~~~~~~-----------~l~~~~~~~~~~~~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 318 (404)
T PTZ00376 251 KNMGLYGERIGALHIVCANKEEAA-----------NVLSQLKLIIRPMY-SSPPIHGARIADRILSDPELRAEWLSELKE 318 (404)
T ss_pred CcccccccccceEEEEeCCHHHHH-----------HHHHHHHHHHhhhc-CCCchHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99 5799999984 3431000 12222222111111 2222222223333343210 0 11234
Q ss_pred HHHHHHHHHHHHHHHHHcCC----ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 314 YAKQVKANAVALGNYLTGKG----YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~g----~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
..+++.++.+.+.+.|.+.+ +.+. .+.++.++|+++ +.+.+..++++.||.+.++ + |
T Consensus 319 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~p~gg~f~~~~~-----~~~~~~~L~~~~~v~v~p~------------~-R 379 (404)
T PTZ00376 319 MSGRIQNMRQLLYDELKALGSPGDWEHI-INQIGMFSFTGL-----TKEQVERLIEKYHIYLLDN------------G-R 379 (404)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccc-ccCceEEEecCC-----CHHHHHHHHHhCCEeecCC------------C-e
Confidence 44566788888999998875 3332 345677888865 2344566677779998542 2 9
Q ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 390 IGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 390 ig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
|++.+ ++.++++.+++.|++++.
T Consensus 380 is~~~-----~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 380 ISVAG-----LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred EEEec-----cCHHhHHHHHHHHHHHHh
Confidence 98843 347899999999988765
No 200
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=3.6e-19 Score=179.68 Aligned_cols=213 Identities=17% Similarity=0.157 Sum_probs=148.6
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++.....+| +++++++|.+. + +.++||+.|+.+++.++++|||+|++.++.|++..... ..+...
T Consensus 51 ~np~~~~lE----~~lA~l~g~~~----~-l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~------~~~~~~ 115 (385)
T PRK08574 51 ENPTLRPLE----EALAKLEGGVD----A-LAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL------KSLEKF 115 (385)
T ss_pred CCccHHHHH----HHHHHHhCCCc----E-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH------HHhhcc
Confidence 445666777 57889999875 3 55789999999999999999999999999988753210 001111
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ .+|++++++++.+.++|+|++. .||+|...|+++|.++|+++|+++++|++|+.|+..
T Consensus 116 g--~~v~~~-------~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~---- 182 (385)
T PRK08574 116 G--VKVVLA-------YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY---- 182 (385)
T ss_pred C--cEEEEE-------CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 2 222222 2478999998875478988865 788999999999999999999999999999866543
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
.|+. ++|++++|+||++.||. ||++++.++ ++.+++...... .|.......++ .+++
T Consensus 183 -~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~--------------~~~~~~~~~~~~--~g~~~~p~~a~--l~l~ 243 (385)
T PRK08574 183 -RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG--------------EFLEELWEWRRR--LGTIMQPFEAY--LVLR 243 (385)
T ss_pred -ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH--------------HHHHHHHHHHHh--cCCCCCHHHHH--HHHc
Confidence 2444 68999999999998873 686777543 454444321111 12111112222 2333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+. .+....++..+|+..+++.|++.
T Consensus 244 ~l~--tL~~R~~~~~~na~~la~~L~~~ 269 (385)
T PRK08574 244 GLK--TLEVRFERQCRNAMAIAEFLSEH 269 (385)
T ss_pred ccC--cHHHHHHHHHHHHHHHHHHHHcC
Confidence 333 35667788888999999999876
No 201
>PLN02397 aspartate transaminase
Probab=99.84 E-value=2.5e-19 Score=183.68 Aligned_cols=264 Identities=19% Similarity=0.239 Sum_probs=169.9
Q ss_pred CChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee-cCCCCCCCHHHHHHHhhhC--
Q 012104 104 YSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV-NSSTGYIDYDKLEEKALDF-- 180 (471)
Q Consensus 104 ~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v-~~~~~~iD~~~le~~~~~~-- 180 (471)
++|+.++...+.+++.|||+|++++|.|++|.. .+...|. +++.++. +++++.+|++.+++.+...
T Consensus 125 g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~---------~~~~~g~--~~~~v~l~~~~~~~~d~~~l~~~l~~~~~ 193 (423)
T PLN02397 125 GTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN---------IFRDAGV--PVRTYRYYDPKTRGLDFDGLLEDLKAAPD 193 (423)
T ss_pred chHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH---------HHHHcCC--eEEEeecccCcCCccCHHHHHHHHHhCCC
Confidence 344455666666777899999999999988753 1223443 4555554 3345789999998887642
Q ss_pred CCcEEEEc--CCCCCccccHHH---HHHHHHHhCCEEEEeccccchhhcccc---CCC--CCC-Ccc--EEEeCCCCc--
Q 012104 181 RPKLIICG--GSAYPRDWDYAR---FRAVADKCGALLLCDMAHISGLVAAQE---AAN--PFE-YCH--IVTTTTHKS-- 245 (471)
Q Consensus 181 ~pklIi~~--~s~~g~~~d~~~---i~~ia~~~g~~livD~a~~~glv~~g~---~~~--p~~-~aD--iv~~s~~K~-- 245 (471)
++++++.+ +||+|..++.++ |.++|+++|++||+|++|. ++.+.+. .++ .+. ..+ |++.|++|+
T Consensus 194 ~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~ 272 (423)
T PLN02397 194 GSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQ-GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMG 272 (423)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccC-CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCC
Confidence 44566654 799999987654 5678899999999999997 7766431 111 111 112 779999999
Q ss_pred CCCCCeEEEE--eeCCCCCCCCCCCCCcccchHh----hhhhcCCCCCCCCCcHHHHHHHHHHHHHh--ccH---HHHHH
Q 012104 246 LRGPRAGMIF--YRKGPKPPKKGQPEGAVYDFED----KINFAVFPSLQGGPHNHQIGALAVALKQA--STP---AFKAY 314 (471)
Q Consensus 246 l~GprgG~i~--~~~~~~~~~~~~~~i~~~~l~~----~i~~~~~~~~~g~p~~~~iaa~a~al~~~--~~~---~~~~~ 314 (471)
++|+|.||++ .... ++.+ .+.........+ +......+.+.++..- .+. .+++.
T Consensus 273 ~~G~RvG~~v~~~~~~--------------~~~~~~~~~~~~~~~~~~~~-~~~~~q~~~~~~L~~~~~~~~~~~~~~~~ 337 (423)
T PLN02397 273 LYGERVGALSVVCKSA--------------DVAVRVKSQLKLIARPMYSN-PPIHGASIVATILGDPELFSEWTKELKGM 337 (423)
T ss_pred CccccceEEEEEeCCH--------------HHHHHHHHHHHHHHhcccCC-CcHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5799999985 3221 2222 222221111122 2222223333334220 001 14556
Q ss_pred HHHHHHHHHHHHHHHHcCC----ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEE
Q 012104 315 AKQVKANAVALGNYLTGKG----YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRI 390 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g----~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 390 (471)
.+++.++.+.+.+.|++.| ++++ .+.+++++|+++. .+.+.++++++||.+.+ ++ ||
T Consensus 338 ~~~~~~rr~~l~~~L~~~~~~~~~~~~-~p~gg~fl~~~l~-----~~~~~~Ll~~~~V~v~~------------~~-Ri 398 (423)
T PLN02397 338 ADRIISMRQKLYDALEARGSPGDWSHI-TKQIGMFSFTGLN-----KEQVDRMTKEYHIYMTR------------DG-RI 398 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcc-cCCceEEEecCCC-----HHHHHHHHHhCCEEECC------------CC-eE
Confidence 6677888899999999877 6653 3567788898763 45567788999999852 23 99
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 391 GTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 391 g~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
++.. .+++.++++.+.|.+++.+
T Consensus 399 ~~~~-----~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 399 SMAG-----LSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred EEee-----CCHHHHHHHHHHHHHHHhc
Confidence 8833 3478999999999998753
No 202
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.84 E-value=2.5e-19 Score=181.79 Aligned_cols=221 Identities=21% Similarity=0.215 Sum_probs=149.7
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccc
Q 012104 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (471)
Q Consensus 62 g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 141 (471)
+|...|| ++...+.+| +++++++|+++ +.+ +.||+.|+..++.++++|||+|++.++.|+++.....
T Consensus 56 ~~~y~r~--~~p~~~~Le----~~lA~l~G~~~----~~~-~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~-- 122 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFE----KRMCALEGAED----ARA-TASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE-- 122 (398)
T ss_pred CceeecC--CCchHHHHH----HHHHHHhCCCe----eeE-ecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH--
Confidence 4444443 334456666 57889999987 333 6799999998888899999999999999887642100
Q ss_pred cCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 142 ~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
......| .++..+ + .+|++++++++. .++|+|++. +||+|...|+++|.++|+++|+++++|++|+
T Consensus 123 ---~~~~~~G--~~v~~v--d----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a 190 (398)
T PRK07504 123 ---TLLPRYG--IESTLV--D----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFA 190 (398)
T ss_pred ---HHHhhcC--eEEEEE--C----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCcc
Confidence 0001122 344433 2 379999999886 478988754 6889999999999999999999999999997
Q ss_pred chhhccccCCCCCC-CccEEEeCCCCcCCCC--C-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHH
Q 012104 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP--R-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (471)
Q Consensus 220 ~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gp--r-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ 295 (471)
.++. ..|+. ++|++++|+||++.|+ + ||+++++++ .+.+++...... .|......
T Consensus 191 ~~~~-----~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~--------------~i~~~~~~~~~~--~g~~~s~~ 249 (398)
T PRK07504 191 TPLF-----QKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA--------------WIEEHLQDYFRH--TGPSLSPF 249 (398)
T ss_pred cccc-----CCchhhCCCEEEeeccccccCCccceEEEEEeCcH--------------HHHHHHHHHHHH--hCCCCCHH
Confidence 6542 34555 7999999999998664 4 578877763 232233221110 12112222
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 296 iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+++ +++.+. .+....++..+|++.+++.|++.
T Consensus 250 ~A~~--~l~~L~--tl~~R~~~~~~na~~la~~L~~~ 282 (398)
T PRK07504 250 NAWT--LLKGLE--TLPVRVRQQTESAAAIADFLAGH 282 (398)
T ss_pred HHHH--HHhccc--hHHHHHHHHHHHHHHHHHHHHcC
Confidence 2222 333332 35677778889999999999986
No 203
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=3.9e-19 Score=180.02 Aligned_cols=245 Identities=20% Similarity=0.210 Sum_probs=159.3
Q ss_pred cCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh
Q 012104 38 ASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (471)
Q Consensus 38 ~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al 117 (471)
.+..+..+.+.++........ .|++..|+ ++...+.+| +++++++|.+. .+.++||+.|+.+++.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~--~~~~y~r~--~~p~~~~le----~~la~l~g~~~-----~v~~ssG~~Ai~~al~al 96 (390)
T PRK08133 30 LTSSFVFESAAEAAARFAGEE--PGNIYSRF--TNPTVTMFQ----ERLAALEGAEA-----CVATASGMAAILAVVMAL 96 (390)
T ss_pred CCCCcccCCHHHHHHhhcCCc--CCceeECC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHH
Confidence 344455555655554332211 24444454 234455555 67889999875 356789999999999999
Q ss_pred cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCcc
Q 012104 118 LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRD 195 (471)
Q Consensus 118 l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~ 195 (471)
++|||+|++.++.|++.+.... ..+...| .+++.+++ .|++++++.++ .++|+|++. .||+|..
T Consensus 97 ~~~Gd~Vi~~~~~y~~t~~~~~-----~~~~~~G--~~v~~vd~------~d~~~l~~~i~-~~tklV~ie~p~NptG~v 162 (390)
T PRK08133 97 LQAGDHVVSSRSLFGSTVSLFE-----KIFARFG--IETTFVDL------TDLDAWRAAVR-PNTKLFFLETPSNPLTEL 162 (390)
T ss_pred hCCCCEEEEccCcchhHHHHHH-----HHHHHcC--cEEEEECC------CCHHHHHHhcC-cCCeEEEEECCCCCCCCc
Confidence 9999999999988877542100 0011223 34444432 27899999886 478988864 6889999
Q ss_pred ccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCCC--C-eEEEEeeCCCCCCCCCCCCCc
Q 012104 196 WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGP--R-AGMIFYRKGPKPPKKGQPEGA 271 (471)
Q Consensus 196 ~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gp--r-gG~i~~~~~~~~~~~~~~~i~ 271 (471)
.|+++|.++|+++|+++++|++|..+.. ..|+. ++|++++|+||++.|+ + ||+++++++
T Consensus 163 ~dl~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~------------ 225 (390)
T PRK08133 163 ADIAALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE------------ 225 (390)
T ss_pred CCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCHH------------
Confidence 9999999999999999999999875432 23454 7899999999998664 2 578877763
Q ss_pred ccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 272 VYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 272 ~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
+.+++...... .| +......+. .+++.+. .+....++..+|++.+++.|++. ++.
T Consensus 226 ---~~~~~~~~~~~--~g-~~~~~~~a~-~~l~gl~--tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 226 ---LMEEVFGFLRT--AG-PTLSPFNAW-VFLKGLE--TLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred ---HHHHHHHHHHH--hC-CCCCHHHHH-HHHcccc--hHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 33333211111 11 111121221 2233322 46667778889999999999986 443
No 204
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=5.7e-19 Score=179.38 Aligned_cols=289 Identities=16% Similarity=0.217 Sum_probs=182.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.....+| +.+++++|.+. .+.++||+.|+.+++.++++|||+|++.++.|++.+.... ..+...|
T Consensus 64 p~~~~Le----~~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~-----~~~~~~G- 128 (400)
T PRK06234 64 PTSTEVE----NKLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLN-----HGLTRYG- 128 (400)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH-----HHHhhCC-
Confidence 4455666 56888999764 3668899999999999999999999999988876542100 0011233
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHh--CCEEEEeccccchhhccccC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~~g~~ 228 (471)
.+++.++ ..|++++++.+.+ ++|+|++. +||+|...|+++|.++|+++ |+++++|++|..+..
T Consensus 129 -~~v~~vd------~~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~----- 195 (400)
T PRK06234 129 -VEVTFVD------TSNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI----- 195 (400)
T ss_pred -eEEEEEC------CCCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc-----
Confidence 3444442 2389999998864 78988854 68899999999999999997 999999999975532
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|+. ++|++++|++|++.|+. ||++++++ ++.+++.........|.......+++ +++
T Consensus 196 ~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~---------------~~~~~l~~~~~~~~~g~~l~p~~a~l--~~~ 258 (400)
T PRK06234 196 QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE---------------EFINQVKLFGIKDMTGSVIGPFEAFL--IIR 258 (400)
T ss_pred CCchhhCCcEEEeeccccccCCCCceeEEEEecH---------------HHHHHHHHHHHHHhcCCCCCHHHHHH--HHh
Confidence 23444 78999999999987653 69998887 44444432111111122222222222 233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcCC-ce-EeeCC---------------CCCeeEEEEccCCCC-CHHHHHHHHhh
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGKG-YS-LVTGG---------------TENHLVLWDLRPLGL-TGNKVEKLCDL 366 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~~-i~~~~---------------~~~~~~~v~~~~~~~-~~~~~~~~L~~ 366 (471)
.+. .+....++..+|++++++.|++.. +. +..++ ..++++.+++.. +. ....+.+.|+-
T Consensus 259 ~l~--tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~-~~~~~~~f~~~l~~ 335 (400)
T PRK06234 259 GMK--TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG-GVEEGKVVMNNVKL 335 (400)
T ss_pred ccC--cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC-cHHHHHHHHHhCCc
Confidence 332 345677778899999999998762 22 22221 124466666642 21 12345666666
Q ss_pred cCeEeccCCc------CCCC--CC----------CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 367 CNITVNKNAV------FGDS--SA----------LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 367 ~gI~v~~~~~------p~~~--~~----------~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.++.++-|.. |... .. ..++-+||++ |+ ||.+.|.+-|.+++.
T Consensus 336 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv------Gl--E~~~dl~~dl~~al~ 396 (400)
T PRK06234 336 ATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSV------GL--EDVDDIIADLKQALD 396 (400)
T ss_pred ceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEe------CC--CCHHHHHHHHHHHHH
Confidence 6666655421 2110 00 1235789886 33 466666666666654
No 205
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=6.8e-19 Score=177.66 Aligned_cols=211 Identities=20% Similarity=0.225 Sum_probs=147.3
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+...+.+| ++++++.|.+. .+.+.||++|+..++.++++|||+|+++++.|++.+... .....
T Consensus 51 ~pt~~~L~----~~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~--------~~~~~ 113 (386)
T PRK08045 51 NPTRDVVQ----RALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF--------DSLAK 113 (386)
T ss_pred CccHHHHH----HHHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH--------HHHHh
Confidence 34455666 57888988643 466788999999999999999999999999998643210 01111
Q ss_pred -ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 152 -IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 152 -~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
...++..+ + ..|++++++.+.+ ++|+|++. +||+|..+|+++|.++|+++|+++++|++|..+. .
T Consensus 114 ~~gi~v~~v--d----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~-----~ 181 (386)
T PRK08045 114 RGCYRVLFV--D----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPA-----L 181 (386)
T ss_pred hCCeEEEEe--C----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccc-----c
Confidence 11233222 2 3689999998864 78988754 6889999999999999999999999999997542 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al 303 (471)
+.|+. ++|+++.|+||++.|+. +|+++++++ ++.+++.... ..+...+|. .+. .++
T Consensus 182 ~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~--------------~~~~~l~~~~~~~g~~~~p~----~~~-l~~ 242 (386)
T PRK08045 182 QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP--------------DVVTELAWWANNIGVTGGAF----DSY-LLL 242 (386)
T ss_pred CCchhhCCCEEEeecceeccCCCCceeEEEEeCcH--------------HHHHHHHHHHHhcCCCCCHH----HHH-HHH
Confidence 34566 79999999999998886 688877653 4544443221 112111221 111 122
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+.+. .+....++..+|+..+++.|++.
T Consensus 243 rgl~--tl~~R~~~~~~na~~la~~L~~~ 269 (386)
T PRK08045 243 RGLR--TLVPRMELAQRNAQAIVKYLQTQ 269 (386)
T ss_pred hhhc--cHHHHHHHHHHHHHHHHHHHHcC
Confidence 3222 35678889999999999999987
No 206
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=8.9e-19 Score=177.79 Aligned_cols=211 Identities=20% Similarity=0.227 Sum_probs=147.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
...+.+| +++++++|.+. .+.++||++|+.+++.++++|||+|++.++.|++.... + ... ....
T Consensus 60 p~~~~Le----~~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~-~-----~~~-~~~~ 123 (405)
T PRK08776 60 PTRDLLG----EALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRL-F-----NAL-AKKG 123 (405)
T ss_pred hHHHHHH----HHHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHH-H-----HHH-HHhc
Confidence 4445555 67888999764 46788999999999999999999999999998763210 0 000 1111
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE-c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC-G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~-~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
+.+++.+ + ..|++++++.++ .++|+|++ + +||+|...|+++|.++|+++|+++++|++|..+. ...
T Consensus 124 g~~v~~v--~----~~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~-----~~~ 191 (405)
T PRK08776 124 HFALITA--D----LTDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA-----LQK 191 (405)
T ss_pred CcEEEEE--C----CCCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc-----cCC
Confidence 2333333 2 258999999886 47898874 4 6899999999999999999999999999997542 234
Q ss_pred CCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHH
Q 012104 231 PFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQ 305 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~ 305 (471)
|+. ++|++++|+||++.|+. +|+++++++ ++.+++.... ..+.. +.... +. ..++.
T Consensus 192 pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~--------------~l~~~l~~~~~~~g~~--~s~~~--a~-l~~~g 252 (405)
T PRK08776 192 PLEFGADLVLHSTTKYINGHSDVVGGAVVARDA--------------ELHQQLVWWANALGLT--GSPFD--AF-LTLRG 252 (405)
T ss_pred cccccCCEEEecCceeecCCCCceEEEEEeCCH--------------HHHHHHHHHHHhcCCC--CCHHH--HH-HHHhh
Confidence 555 78999999999998874 688877653 5555554321 12221 22222 11 12222
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 306 ASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 306 ~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+ ..++...++..+|+..+++.|++.
T Consensus 253 l--~tl~~r~~~~~~na~~la~~L~~~ 277 (405)
T PRK08776 253 L--RTLDARLRVHQENADAIAALLDGH 277 (405)
T ss_pred h--CcHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 256778889999999999999976
No 207
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.84 E-value=2.1e-18 Score=189.41 Aligned_cols=309 Identities=16% Similarity=0.166 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh----cCCCC----EEEEeCCCCCCcccccccccCCccce
Q 012104 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV----LEPHD----RIMGLDLPSGGHLTHGYYTSGGKKIS 148 (471)
Q Consensus 77 ~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al----l~pGD----~Vl~~~~~~~g~~s~~~~~~~g~~~~ 148 (471)
+++...++++++++|.+. +.+++.+|++|+.+.+.++ .++|| +|++++..|+.+.. .+.
T Consensus 542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~---------sa~ 608 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA---------SAV 608 (954)
T ss_pred HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH---------HHH
Confidence 444456789999999985 6788888888886665544 36776 58888866655431 222
Q ss_pred eccceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEE-cCCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchhhc
Q 012104 149 ATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIIC-GGSAYPRD-WDYARFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 149 ~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~-~~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
..| ++++.++++ .++.+|+++|++++.++ ++..|++ .++.+|.. .|+++|+++|+++|+++++|++|..+++.
T Consensus 609 ~~G--~~vv~v~~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~ 685 (954)
T PRK05367 609 MAG--MKVVVVACD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVG 685 (954)
T ss_pred HCC--CEEEEECCC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccC
Confidence 334 466666666 46899999999999764 3444443 35556654 58999999999999999999999755442
Q ss_pred cccCCCCCC-CccEEEeCCCCcCCCCCe------EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCC-CCcHH-H
Q 012104 225 AQEAANPFE-YCHIVTTTTHKSLRGPRA------GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQG-GPHNH-Q 295 (471)
Q Consensus 225 ~g~~~~p~~-~aDiv~~s~~K~l~Gprg------G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g-~p~~~-~ 295 (471)
...|.. ++|++++|+||||.+|.| |++.+++.+.+..++.. +. . ...... .+... ++.-+ .
T Consensus 686 ---l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~-v~---~-~~~~~~--~g~v~ta~~g~al 755 (954)
T PRK05367 686 ---LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHP-VQ---I-AGGETG--IGAVSAAPFGSAS 755 (954)
T ss_pred ---CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCc-cC---c-CCCCCC--cCcchhHHHHHHH
Confidence 223433 899999999999876653 57777764433222110 00 0 000000 01111 11101 1
Q ss_pred HHH-HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCC---CCCeeEEEEccC----CCCCHHHHHHHHhhc
Q 012104 296 IGA-LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGG---TENHLVLWDLRP----LGLTGNKVEKLCDLC 367 (471)
Q Consensus 296 iaa-~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~---~~~~~~~v~~~~----~~~~~~~~~~~L~~~ 367 (471)
++- ..+.+..+..+++++..++...|++++++.|.+ ++++...+ ..-|-.++++.+ .+++..++.+.|.+.
T Consensus 756 ~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~-~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~ 834 (954)
T PRK05367 756 ILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKD-HYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDY 834 (954)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-hcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHC
Confidence 111 123345555667888899999999999999977 45543321 224456667642 146778899999999
Q ss_pred CeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 368 NITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 368 gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
||.....+.| ..+.+||.....+ +++|++++++++..+.....++
T Consensus 835 G~~~~t~~~p------v~~~l~i~ptE~~----s~~elDr~~~al~~i~~e~~~~ 879 (954)
T PRK05367 835 GFHAPTMSFP------VAGTLMVEPTESE----SKAELDRFCDAMIAIRAEIDEV 879 (954)
T ss_pred CCeEeecCCc------cCCEEEEEeeecC----CHHHHHHHHHHHHHHHHHHHHh
Confidence 9987653333 2478999875544 4899999999998887766543
No 208
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.83 E-value=5.5e-19 Score=178.00 Aligned_cols=249 Identities=18% Similarity=0.196 Sum_probs=165.7
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|.+. .+.++||+.|+.+++.++++|||+|++.++.|++..... . ......
T Consensus 38 ~~p~~~~le----~~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~--~---~~~~~~ 103 (369)
T cd00614 38 GNPTVDALE----KKLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLF--E---RLLPKL 103 (369)
T ss_pred CChhHHHHH----HHHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHH--H---HHHhhc
Confidence 445666777 57888999865 356789999999999999999999999998887643100 0 001122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..++. -|++++++++++ ++++|++. .||+|...|+++|+++|+++|+++++|++|+.+..
T Consensus 104 g--~~~~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~----- 169 (369)
T cd00614 104 G--IEVTFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL----- 169 (369)
T ss_pred C--eEEEEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----
Confidence 3 34444322 268999998864 78988864 67899999999999999999999999999976542
Q ss_pred CCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|+. ++|++++|++|++.|+ ++|+++++++ ++.+++...... .|+......+++ +++
T Consensus 170 ~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~--------------~l~~~l~~~~~~--~g~~~~p~~a~~--~l~ 231 (369)
T cd00614 170 QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE--------------ALIQRLRFLRLA--LGTILSPFDAWL--LLR 231 (369)
T ss_pred CChhhhCCcEEEeccceeccCCCCceEEEEEeCcH--------------HHHHHHHHHHHh--hCCCCCHHHHHH--HHc
Confidence 34555 7899999999999774 4899998762 344444432111 111111111222 233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcCC-ce-EeeCC---------------CCCeeEEEEccCCCCCHHHHHHHHhhc
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGKG-YS-LVTGG---------------TENHLVLWDLRPLGLTGNKVEKLCDLC 367 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~~-i~~~~---------------~~~~~~~v~~~~~~~~~~~~~~~L~~~ 367 (471)
.+. .+....++..+|++.+++.|++.+ +. +..++ ..+.++.+++. + +.+.+.++++..
T Consensus 232 ~l~--tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~--~-~~~~~~~f~~~l 306 (369)
T cd00614 232 GLK--TLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK--G-GLEAAKKFLNAL 306 (369)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC--C-CHHHHHHHHHcC
Confidence 332 355677888999999999999874 32 22221 12445666664 2 445566666665
Q ss_pred CeE
Q 012104 368 NIT 370 (471)
Q Consensus 368 gI~ 370 (471)
.+.
T Consensus 307 ~~~ 309 (369)
T cd00614 307 KLF 309 (369)
T ss_pred Ccc
Confidence 554
No 209
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=2.8e-18 Score=177.75 Aligned_cols=312 Identities=15% Similarity=0.096 Sum_probs=196.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCC----ceeeecCChHHHHHHHHHHh----cC-C-----CC-EEEEeCCCCCCccccc
Q 012104 74 FIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAV----LE-P-----HD-RIMGLDLPSGGHLTHG 138 (471)
Q Consensus 74 ~~~~lE~~~~~~~~~lfg~~~~~~----~~~v~~~sGt~A~~~~~~al----l~-p-----GD-~Vl~~~~~~~g~~s~~ 138 (471)
...++|+.+.+++++++|.+...| +.-+.+++||.||+.++.+. ++ . .. .|++.+ .+|.|..
T Consensus 119 ~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~---~aH~Sv~ 195 (490)
T PLN02880 119 AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASD---QTHSALQ 195 (490)
T ss_pred ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcC---CchHHHH
Confidence 356899999999999999986422 12345678899998777543 11 1 12 334444 3344421
Q ss_pred ccccCCccceecccee-EEEeeeecC-CCCCCCHHHHHHHhhhC-----CCcEEEE--cCCCCCccccHHHHHHHHHHhC
Q 012104 139 YYTSGGKKISATSIYF-ESLPYKVNS-STGYIDYDKLEEKALDF-----RPKLIIC--GGSAYPRDWDYARFRAVADKCG 209 (471)
Q Consensus 139 ~~~~~g~~~~~~g~~~-~~~~~~v~~-~~~~iD~~~le~~~~~~-----~pklIi~--~~s~~g~~~d~~~i~~ia~~~g 209 (471)
+.+...|.+. .++.+++|. +++.+|++.|++.+.+. .|-+|+. |.+.+|.+.|+++|+++|+++|
T Consensus 196 ------Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 196 ------KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred ------HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 2334556542 234455663 35789999999998642 3666663 4778999999999999999999
Q ss_pred CEEEEeccccchhhccccCC---CCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHh-------h
Q 012104 210 ALLLCDMAHISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFED-------K 278 (471)
Q Consensus 210 ~~livD~a~~~glv~~g~~~---~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~-------~ 278 (471)
+|++||+||+.++.....+. ..+..||.++.++|||+..|.+ |++++++.. .+.. .
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~-------------~l~~~~~~~~~Y 336 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRN-------------ALIQSLSTNPEF 336 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHH-------------HHHHHHccCHHH
Confidence 99999999985543322111 2234789999999999989987 888887521 1100 0
Q ss_pred hhhc------CC--C--CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEE
Q 012104 279 INFA------VF--P--SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVL 347 (471)
Q Consensus 279 i~~~------~~--~--~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~ 347 (471)
+... .+ . ..+.+-... ...+..+++....+++.++.++..++++++.+.|++. +++++.++ ...+++
T Consensus 337 l~~~~~~~~~~~~~~~~~i~~~rr~~-alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~ 414 (490)
T PLN02880 337 LKNKASQANSVVDYKDWQIPLGRRFR-SLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVC 414 (490)
T ss_pred hcCccccccCCCChhccCcCCCCccc-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEE
Confidence 1000 00 0 011111111 2234446666666788888888899999999999876 89987643 344666
Q ss_pred EEccCCCCCH---H----HHHHHH-hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 348 WDLRPLGLTG---N----KVEKLC-DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 348 v~~~~~~~~~---~----~~~~~L-~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+.+.+.+.+. . ++.+.| ++..+.+....+.+ ..++|+++.... .+++|++.+.+.|.++...
T Consensus 415 Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g------~~~lR~~~~n~~---tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 415 FRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSG------KYVLRFAVGAPL---TEERHVTAAWKVLQDEASK 484 (490)
T ss_pred EEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECC------EEEEEEEecCCC---CCHHHHHHHHHHHHHHHHH
Confidence 6665543332 1 232333 34556665543332 358999874332 3579999999999876544
No 210
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=6.5e-19 Score=177.13 Aligned_cols=289 Identities=14% Similarity=0.120 Sum_probs=180.1
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ++++++.|.+. .+.++||+.|+.+++.++++|||+|++.++.|++... ... ......
T Consensus 48 gnPt~~~lE----~~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~--~~~---~~~~~~ 113 (377)
T TIGR01324 48 GTLTHFALQ----DAMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRY--FCD---IVLKRM 113 (377)
T ss_pred CCccHHHHH----HHHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--HHH---HHHHhc
Confidence 556677777 56788999875 3557899999999999999999999999988865321 000 001112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ +. . +.+++++.++ .++|+|++. .|++|...|+++|+++|+++|+++++|++|+.|...
T Consensus 114 g--i~v~~~--d~---~-~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~---- 180 (377)
T TIGR01324 114 G--VDITYY--DP---L-IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLF---- 180 (377)
T ss_pred C--cEEEEE--CC---C-CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence 2 233333 21 1 2378888876 478998865 678999999999999999999999999999877543
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCC-cHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP-HNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p-~~~~iaa~a~al 303 (471)
.|+. ++|++++|+||++.|+. ||++++++ +..+++..... ..|.. .... +. ..+
T Consensus 181 -~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~---------------~~~~~l~~~~~--~~G~~l~p~~--a~-~~~ 239 (377)
T TIGR01324 181 -KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA---------------RTWDQLREHSY--LMGQMVDADD--AY-TTL 239 (377)
T ss_pred -CccccCceEEEecCceeccCCCCceEEEEEeCH---------------HHHHHHHHHHH--HhCCCCCHHH--HH-HHH
Confidence 3555 79999999999998874 68887765 33333332111 11221 2222 11 122
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc-eEeeCC---------------CCCeeEEEEccCCC-CCHHHHHHHHh
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK-GY-SLVTGG---------------TENHLVLWDLRPLG-LTGNKVEKLCD 365 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~-~i~~~~---------------~~~~~~~v~~~~~~-~~~~~~~~~L~ 365 (471)
+.+. .+....++..+|+..+++.|+++ .+ ++..++ ..++++.+++...+ .....+.+.|+
T Consensus 240 rgl~--tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~ 317 (377)
T TIGR01324 240 RGLR--TLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQ 317 (377)
T ss_pred hhhh--hHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC
Confidence 3222 34456788899999999999876 23 333221 12456667764211 11234555565
Q ss_pred hcCeEeccCCc------CC-CC-------CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 366 LCNITVNKNAV------FG-DS-------SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 366 ~~gI~v~~~~~------p~-~~-------~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
-.++.++-|.. |. .. .....+-|||++ |+ ||.+.|.+-|.+++.
T Consensus 318 ~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~sv------Gl--E~~~dl~~dl~~al~ 375 (377)
T TIGR01324 318 LFGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHI------GL--ENVDDLKADLKAGFE 375 (377)
T ss_pred cceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEe------CC--CCHHHHHHHHHHHHh
Confidence 55666655421 11 00 001224688876 33 466666666666553
No 211
>PLN02452 phosphoserine transaminase
Probab=99.83 E-value=2.2e-18 Score=171.81 Aligned_cols=341 Identities=16% Similarity=0.118 Sum_probs=218.7
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhhhccCCCCC----CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 32 RGIELIASENFTSFAVIEALGSALTNKYSEGM----PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~----~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
..+++.|++..+|++|++++...+.+.-..|. .++| +.++.+.++ .+++.++++++++.+ |.+.+...|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHR---s~~f~~i~~-~~~~~L~~l~~~p~~-y~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHR---GKEFLSIIQ-KAEADLRELLDIPDN-YEVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCC---chHHHHHHH-HHHHHHHHHhCCCCC-ceEEEEeCccH
Confidence 35789999999999999999888765443332 2233 446666665 467899999998543 44667678899
Q ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 108 PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 108 ~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
.++.++...|+.+||+++... .|.++..+.. .+...|........+....+..+|+++++. ..+++.|.+
T Consensus 82 ~~~ea~~~nl~~~~~~~l~~~---~G~fg~r~~~----~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~ 151 (365)
T PLN02452 82 TQFAAIPLNLCKPGDKADFVV---TGSWSKKAAK----EAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHI 151 (365)
T ss_pred HHHHHHHHhcCCCCCeEEEEE---CCHHHHHHHH----HHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEE
Confidence 999999999999999999887 4454433211 111223211111100011112567776522 224566654
Q ss_pred c--CCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCC-
Q 012104 188 G--GSAYPRD-WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKP- 262 (471)
Q Consensus 188 ~--~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~- 262 (471)
. .+++|.. .|++++. ++++++|+++.+|. .|.++...++..+|.||++ ||.| |+++.+++...
T Consensus 152 ~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~-----~pidv~~~~v~~~saqK~l-GP~Gl~~v~vr~~~l~~ 219 (365)
T PLN02452 152 CANETIHGVEFKDYPDVG------NVPLVADMSSNFLS-----KPVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKDLIGN 219 (365)
T ss_pred CCCCCCCcEecCcccccC------CCeEEEECCccccC-----cccCHHHcCEEEEeccccc-CCCCeEEEEEcHHHHhh
Confidence 4 5667874 6665553 38999999987652 3444444456668999998 7987 88888775321
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcC-CceEe-eC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK-GYSLV-TG 339 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~-g~~i~-~~ 339 (471)
.....+.. +++....+.. .+.++|+.+.+.++..+++.+.++ +++...++..+++++|.+.|++. |+... ..
T Consensus 220 ~~~~~~~~--~~~~~~~~~~---s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~ 294 (365)
T PLN02452 220 ARPITPGM--LDYKIHAEND---SLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVE 294 (365)
T ss_pred cccCCCch--hhHHHHHhcC---CccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 11111111 1222112221 234689999999999999998765 78999999999999999999885 77111 11
Q ss_pred CC-CCe-eEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 340 GT-ENH-LVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 340 ~~-~~~-~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.. .+. .+.+.+.... ..+++.+.++++|+..-++ ..+ -+++|+|+ +.. +..++++.|++++++--
T Consensus 295 ~~~rs~~~vsF~~~~~~-~~~~f~~~~~~~g~~~~~G----~r~---~gg~R~s~--yna--~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 295 KSVRSLMNVPFTLGGSE-LEAEFVKEAAKAGMVQLKG----HRS---VGGMRASI--YNA--MPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred hHHhCCeEEEEEcCCch-hHHHHHHHHHHCCCcccCC----ccc---cCceEEEC--cCC--CCHHHHHHHHHHHHHHH
Confidence 11 122 2333443322 4566899999999998654 321 24699998 432 56899999999997743
No 212
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.83 E-value=7.1e-18 Score=182.16 Aligned_cols=313 Identities=15% Similarity=0.138 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc--------CCCCEEEEeCCCCCCcccccccccCCccce
Q 012104 77 EIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--------EPHDRIMGLDLPSGGHLTHGYYTSGGKKIS 148 (471)
Q Consensus 77 ~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all--------~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~ 148 (471)
+++...++++++++|.+. +.+++.+|++|+.+.++++- ...++|+++.-.|+.... ...
T Consensus 530 q~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa---------sa~ 596 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA---------SAA 596 (939)
T ss_pred HHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH---------HHH
Confidence 344445689999999995 67999999999887666652 234678888877654321 122
Q ss_pred eccceeEEEeeeecCCCCCCCHHHHHHHhhh--CCCcEEEEc-CCCCCcccc-HHHHHHHHHHhCCEEEEeccccchhhc
Q 012104 149 ATSIYFESLPYKVNSSTGYIDYDKLEEKALD--FRPKLIICG-GSAYPRDWD-YARFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 149 ~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~--~~pklIi~~-~s~~g~~~d-~~~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
..| ++++.++++ +++.+|+++|++++.+ .++++|++. .|.+|...| +++|+++|+++|+++++|.++..++.
T Consensus 597 ~~G--~~Vv~V~~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~- 672 (939)
T TIGR00461 597 MAG--MQVVPVNCD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV- 672 (939)
T ss_pred HCC--CEEEEeccC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCC-
Confidence 334 566666666 6789999999999975 367777654 667888877 99999999999999999999965443
Q ss_pred cccCCCCCC-CccEEEeCCCCcCCCC-----Ce-EEEEeeCCCCCCCCCCCCCcccchH---hhhhhcCCCCCCCCCcHH
Q 012104 225 AQEAANPFE-YCHIVTTTTHKSLRGP-----RA-GMIFYRKGPKPPKKGQPEGAVYDFE---DKINFAVFPSLQGGPHNH 294 (471)
Q Consensus 225 ~g~~~~p~~-~aDiv~~s~~K~l~Gp-----rg-G~i~~~~~~~~~~~~~~~i~~~~l~---~~i~~~~~~~~~g~p~~~ 294 (471)
....|-. ++|++++|.||+|.+| .| |++.+++.+.+..+++.....++.. +.+. +......++..+.
T Consensus 673 --~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Ig-a~s~~~~g~a~~~ 749 (939)
T TIGR00461 673 --GLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIG-SVSAAPYGSASIL 749 (939)
T ss_pred --CCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccc-cccccccCcHHHH
Confidence 1223433 7999999999997743 33 8888887654443332211100110 0011 1111011211111
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC---CCeeEEEEccC----CCCCHHHHHHHHhhc
Q 012104 295 QIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT---ENHLVLWDLRP----LGLTGNKVEKLCDLC 367 (471)
Q Consensus 295 ~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~---~~~~~~v~~~~----~~~~~~~~~~~L~~~ 367 (471)
.+ ..+.++.+...++++..++...|+++|++.|.+ +++++..+. .-|-+++++++ .|++..++.+.|.+.
T Consensus 750 l~--a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~ 826 (939)
T TIGR00461 750 PI--SWMYIKMMGNEGLPKASVVAILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDY 826 (939)
T ss_pred HH--HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhC
Confidence 22 223455566678999999999999999999987 777765432 23456778764 256788899999999
Q ss_pred CeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 368 NITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 368 gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
|+.....+.| ..+.+=|-... ..+.+|++++++++..+-....++
T Consensus 827 G~hapt~~~p------v~g~lmiepTE----~eskeelD~f~~al~~I~~e~~~~ 871 (939)
T TIGR00461 827 GFHAPTLSFP------VPGTLMVEPTE----SESLEELDRFCDAMIAIKEEINAL 871 (939)
T ss_pred CeeccccCCc------cCCeEEEEeec----cCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9986543222 12232232211 235899999999998876665543
No 213
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.83 E-value=2e-18 Score=175.54 Aligned_cols=213 Identities=18% Similarity=0.188 Sum_probs=147.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
...+.+| +++++++|+++ .+.++||+.|+.+++.++++|||+|++..+.|++.+... . ..+...|
T Consensus 65 p~~~~le----~~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~--~---~~~~~~G- 129 (403)
T PRK07503 65 PTLALLE----QRMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL--H---HGLGEFG- 129 (403)
T ss_pred chHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH--H---HHHhhCC-
Confidence 4556666 57889999875 366789999999999999999999999998886543200 0 0011223
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
.++..+++ .|++++++.+.. ++|+|++. .||+|...|+++|.++|+++|+++++|++|..+.. ..
T Consensus 130 -~~v~~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~~ 196 (403)
T PRK07503 130 -VTVRHVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----QR 196 (403)
T ss_pred -EEEEEeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----CC
Confidence 34444422 379999998864 78998864 78899999999999999999999999999975532 23
Q ss_pred CCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHh
Q 012104 231 PFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~ 306 (471)
|+. ++|++++|++|++.|+ +||+++.++ ++.+++.........|.......+++ +++.+
T Consensus 197 ~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~---------------~l~~~l~~~~~~~~~g~~~s~~~a~l--~l~~L 259 (403)
T PRK07503 197 PLELGADLVVHSATKYLGGHGDITAGLVVGGK---------------ALADRIRLEGLKDMTGAVMSPFDAFL--LMRGL 259 (403)
T ss_pred chhhCCCEEEccccccccCCCceeEEEEEcCH---------------HHHHHHHhhhHHhCcCCCCCHHHHHH--HHcCc
Confidence 444 7899999999999875 478887554 45555542111112222222222222 33333
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 307 STPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 307 ~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
. .+..+.++..+|++.+.+.|++.
T Consensus 260 ~--tl~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 260 K--TLALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 45566777789999999999876
No 214
>PRK04311 selenocysteine synthase; Provisional
Probab=99.83 E-value=4.7e-18 Score=174.01 Aligned_cols=319 Identities=18% Similarity=0.197 Sum_probs=195.9
Q ss_pred CCCCcHHHHHHHhhhhhccCCCCC---CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHH
Q 012104 40 ENFTSFAVIEALGSALTNKYSEGM---PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTA 116 (471)
Q Consensus 40 ~n~~s~~v~~a~~~~l~~~~~~g~---~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~a 116 (471)
-..+|+++++++...+.+.....| .+.| | +.++.+ ++.+++++|+++ + +.++||+.|+.+++.+
T Consensus 95 ~s~l~~~v~eav~~~~~~~~~le~~l~~g~~---g-~r~~~~----e~~lA~l~Gae~----a-~vv~sgtaAl~l~l~~ 161 (464)
T PRK04311 95 RALLSEAAIEAVTEAARGYSNLEYDLATGKR---G-SRDRAL----AALLCALTGAED----A-LVVNNNAAAVLLALNA 161 (464)
T ss_pred CCCCCHHHHHHHHHHHhcccccccchhhccc---c-hHHHHH----HHHHHHHhCCCe----E-EEECCHHHHHHHHHHH
Confidence 345789999999877754321111 1111 1 223344 467889999986 3 5578899999888865
Q ss_pred hcCCCCEEEEeCCCCC---CcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-CCC-
Q 012104 117 VLEPHDRIMGLDLPSG---GHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-GSA- 191 (471)
Q Consensus 117 ll~pGD~Vl~~~~~~~---g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~s~- 191 (471)
+.+||+|++.+.++. |.+.. . ..+...| .+++.++.+ ...+++++++++. .++++|+.. .++
T Consensus 162 -l~~GdeVIvs~~e~~~~ggs~~i----~--~~~~~~G--~~l~~v~~~---~~t~~~dle~aI~-~~TklV~~vh~sN~ 228 (464)
T PRK04311 162 -LAAGKEVIVSRGELVEIGGAFRI----P--DVMRQAG--ARLVEVGTT---NRTHLRDYEQAIN-ENTALLLKVHTSNY 228 (464)
T ss_pred -hCCCCEEEEcchhhhhcCcchhh----H--HHHHHCC--cEEEEECCC---CCCCHHHHHHhcC-ccCeEEEEEcCCCc
Confidence 589999999875432 21110 0 0111234 344444432 3468999999886 478887744 333
Q ss_pred ----CCccccHHHHHHHHHHhCCEEEEeccccchhhc----cc--cCC---CCCC-CccEEEeCCCCcCCCCCeEEEEee
Q 012104 192 ----YPRDWDYARFRAVADKCGALLLCDMAHISGLVA----AQ--EAA---NPFE-YCHIVTTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 192 ----~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~----~g--~~~---~p~~-~aDiv~~s~~K~l~GprgG~i~~~ 257 (471)
++...|+++|+++|+++|+++++|.++ |... .| ..| .++. ++|++++|+||+|.||.+|+++++
T Consensus 229 ~i~G~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~ 306 (464)
T PRK04311 229 RIEGFTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGK 306 (464)
T ss_pred cccccCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEc
Confidence 245689999999999999999999964 3321 11 112 2333 799999999999999999999988
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCC-CCCCCCCcHHHHHHHHHHHHHhccHH-----------HHHHHHHHHHHHHHH
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQASTPA-----------FKAYAKQVKANAVAL 325 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~-~~~~g~p~~~~iaa~a~al~~~~~~~-----------~~~~~~~~~~na~~l 325 (471)
+ ++.+++.+... ..+ ...-..++++..++.....+. +....++..++++.+
T Consensus 307 ~---------------~li~~l~~~~~~r~l--r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~l 369 (464)
T PRK04311 307 K---------------ELIARLKKHPLKRAL--RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERL 369 (464)
T ss_pred H---------------HHHHHHhhchhHHHH--hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHH
Confidence 7 45544442100 000 001224455555555443221 112236777899999
Q ss_pred HHHHHcC---Cc--eEee------CCCC--C--eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEE
Q 012104 326 GNYLTGK---GY--SLVT------GGTE--N--HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRI 390 (471)
Q Consensus 326 ~~~L~~~---g~--~i~~------~~~~--~--~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 390 (471)
++.|+.. ++ .+.. ||+. . .-..+.+.+.+.+..++.+.|++....|-.. + ..+.+.+
T Consensus 370 a~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-~-------~~~~~~l 441 (464)
T PRK04311 370 AAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR-I-------EDGRLLL 441 (464)
T ss_pred HHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-E-------ECCEEEE
Confidence 9999875 23 3432 2211 1 1233455555778899999998755433221 1 1355666
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 391 GTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 391 g~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
-+ |-+.++|++.+++.+.+++
T Consensus 442 d~-----r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 442 DL-----RTLEEEDEERLAAALLEAL 462 (464)
T ss_pred Ee-----CcCCHHHHHHHHHHHHHHh
Confidence 55 4467899999999998865
No 215
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=1.3e-18 Score=175.55 Aligned_cols=289 Identities=20% Similarity=0.198 Sum_probs=185.7
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| +++++++|++. .+.++||+.|+.+++. +++|||+|++.++.|++...... ..+...
T Consensus 45 ~~p~~~~le----~~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~-----~~~~~~ 109 (378)
T TIGR01329 45 GNPTRTALE----SLLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLT-----QVVPRS 109 (378)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHH-----HHHHHc
Confidence 344556666 67888999864 3567899988887665 78999999999988876431000 001112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.+++ .|++++++.++ .++|+|++. .|++|...|+++|+++|+++|+++++|++|..+. .
T Consensus 110 G--~~v~~vd~------~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~-----~ 175 (378)
T TIGR01329 110 G--VVVVHVDT------TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPL-----L 175 (378)
T ss_pred C--cEEEEeCC------CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccc-----c
Confidence 3 34444422 38999999886 478988854 6789999999999999999999999999987553 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|+. ++|++++|+||++.||. +|+++++++ ++.+++...... .|......-+.+ .+.
T Consensus 176 ~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~--------------~~~~~~~~~~~~--~G~~~~~~~a~l--~~~ 237 (378)
T TIGR01329 176 CNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE--------------EIAKKVYFLQNS--TGSGLAPFDCWL--LLR 237 (378)
T ss_pred CChhhcCCcEEEEecceeccCCccceeEEEEeCcH--------------HHHHHHHHHHHh--cCCcCCHHHHHH--HHc
Confidence 34555 79999999999998864 788888664 454544432221 111111111222 233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc-eEeeCCC---------------CCeeEEEEccCCCCC-HHHHHHHHhh
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK-GY-SLVTGGT---------------ENHLVLWDLRPLGLT-GNKVEKLCDL 366 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~-~i~~~~~---------------~~~~~~v~~~~~~~~-~~~~~~~L~~ 366 (471)
.+. .+....++..+|+..+++.|+++ .. ++..++- .+.++.+++. +.. ..++...|+.
T Consensus 238 ~l~--tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~--~~~~~~~~~~~L~~ 313 (378)
T TIGR01329 238 GIK--TLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG--SVALSKRLVEATKL 313 (378)
T ss_pred cCC--CHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC--CHHHHHHHHHhCcC
Confidence 322 46677888899999999999875 22 2322110 1234555552 333 4567788888
Q ss_pred cCeEeccCCc------CCCC-----C-----C--CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 367 CNITVNKNAV------FGDS-----S-----A--LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 367 ~gI~v~~~~~------p~~~-----~-----~--~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+|.++-|.. |... . . ..++-|||++ |+ ||.+.|.+-|.+++..
T Consensus 314 ~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv------Gl--E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 314 FSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSV------GI--EDVDDLISDLDIAFVT 375 (378)
T ss_pred cccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEe------cc--CCHHHHHHHHHHHHHh
Confidence 8888876642 2211 0 0 1235788886 33 5677777777777653
No 216
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.83 E-value=3e-18 Score=170.22 Aligned_cols=288 Identities=19% Similarity=0.201 Sum_probs=180.2
Q ss_pred cCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH-H
Q 012104 31 CRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP-A 109 (471)
Q Consensus 31 ~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~-A 109 (471)
++.+.|..++|..++.+++...+.+ .+ ||. .. ...+ ++++++++|.+.+ +|..++|+. +
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~----y~~------~~-~~~l----r~~la~~~~~~~~----~i~~t~G~~~~ 76 (330)
T TIGR01140 17 EDWLDFSTGINPLGPPVPPIPASAW-AR----YPD------PE-YDEL----RAAAAAYYGLPAA----SVLPVNGAQEA 76 (330)
T ss_pred hheeEccccCCCCCCChhhcchHHH-hh----CCC------cc-HHHH----HHHHHHHhCCChh----hEEECCCHHHH
Confidence 3567888777766544444332221 22 222 11 1333 4677788898653 455667664 6
Q ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-Ec
Q 012104 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CG 188 (471)
Q Consensus 110 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~ 188 (471)
+.++. .++.+| .|++.+|.|.++.. .+...| ++++.++ |++++++.+. ++++|+ ++
T Consensus 77 i~~~~-~~l~~g-~vl~~~p~y~~~~~---------~~~~~g--~~~~~~~--------d~~~l~~~~~--~~~~v~i~~ 133 (330)
T TIGR01140 77 IYLLP-RLLAPG-RVLVLAPTYSEYAR---------AWRAAG--HEVVELP--------DLDRLPAALE--ELDVLVLCN 133 (330)
T ss_pred HHHHH-HHhCCC-eEEEeCCCcHHHHH---------HHHHcC--CEEEEeC--------CHHHHHhhcc--cCCEEEEeC
Confidence 66654 446788 68888988876542 112233 3444442 8899998884 466554 44
Q ss_pred -CCCCCccccH---HHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcC--CCCCeEEEEeeCCC
Q 012104 189 -GSAYPRDWDY---ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL--RGPRAGMIFYRKGP 260 (471)
Q Consensus 189 -~s~~g~~~d~---~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l--~GprgG~i~~~~~~ 260 (471)
+||+|..++. ++|+++|+++|++|++|++|. ++........-.+ ..++++.|+||++ +|.|.|++++++
T Consensus 134 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~-- 210 (330)
T TIGR01140 134 PNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP-- 210 (330)
T ss_pred CCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--
Confidence 6899999995 556678899999999999996 4433211100011 2359999999995 667889999877
Q ss_pred CCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHHcCC-ceEee
Q 012104 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLTGKG-YSLVT 338 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~-~~~~~~~~~na~~l~~~L~~~g-~~i~~ 338 (471)
++.+.+.... +.. +++....+++...++ ..++ +...+++..+.+.+.+.|++.+ +++.
T Consensus 211 -------------~~~~~l~~~~-~~~--~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 270 (330)
T TIGR01140 211 -------------ALLARLREAL-GPW--TVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVV- 270 (330)
T ss_pred -------------HHHHHHHhcC-CCC--CchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-
Confidence 5555565432 221 112222222222332 3334 5667788888999999999886 5553
Q ss_pred CCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 339 GGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 339 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
+ ..+.++|+++. +..++.+.|.+.||.+.++..++. ..+++|||++
T Consensus 271 ~-~~~~f~~~~~~----~~~~l~~~l~~~gi~v~pg~~f~~---~~~~~iRi~~ 316 (330)
T TIGR01140 271 G-GTALFLLVRTP----DAAALHEALARRGILIRDFDNFPG---LDPRYLRFAL 316 (330)
T ss_pred C-CCCeEEEEEcC----CHHHHHHHHHHCCEEEEECCCCCC---CCCCEEEEEe
Confidence 3 34567888875 346787888889999998876532 1246999997
No 217
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.83 E-value=2.9e-18 Score=184.01 Aligned_cols=310 Identities=18% Similarity=0.190 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcC-------C-CCEEEEeCCCCCCcccccccccCCcc
Q 012104 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE-------P-HDRIMGLDLPSGGHLTHGYYTSGGKK 146 (471)
Q Consensus 75 ~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~-------p-GD~Vl~~~~~~~g~~s~~~~~~~g~~ 146 (471)
.+.+.++ ++++++++|.+. +.+++.||++|++++++++-. + .++|+++.-.|+.+.
T Consensus 542 lq~i~el-q~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp----------- 605 (954)
T PRK12566 542 RAMIDEL-EAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP----------- 605 (954)
T ss_pred HHHHHHH-HHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH-----------
Confidence 3444443 378999999998 789999999999888888632 3 356777775554332
Q ss_pred ceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE--EE-cCCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchh
Q 012104 147 ISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI--IC-GGSAYPRD-WDYARFRAVADKCGALLLCDMAHISGL 222 (471)
Q Consensus 147 ~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI--i~-~~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~gl 222 (471)
......+++++.++.| ++|.+|+++|++++.++++++. ++ .+|.+|.. .|+++|+++|+++|+++++|.+|..++
T Consensus 606 asa~~~GieVv~Vp~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~ 684 (954)
T PRK12566 606 ASAQMAGMRVVIVECD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ 684 (954)
T ss_pred HHHHHCCCEEEEeccC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc
Confidence 1122234566777777 5789999999999975556644 33 34545543 459999999999999999999997554
Q ss_pred hccccCCCCCC-CccEEEeCCCCcCCCCCe-E-----EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCC-CCCcHH
Q 012104 223 VAAQEAANPFE-YCHIVTTTTHKSLRGPRA-G-----MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQ-GGPHNH 294 (471)
Q Consensus 223 v~~g~~~~p~~-~aDiv~~s~~K~l~Gprg-G-----~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~-g~p~~~ 294 (471)
. ....|-+ +|||+++++||||++|+| | .+.+++.+.+...+.+.+ +.... .. ..+.. ..+..+
T Consensus 685 ~---~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~---d~~G~--~~-r~ga~S~~~~gs 755 (954)
T PRK12566 685 V---GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVV---PVEGP--DP-NNGAVSAAPWGS 755 (954)
T ss_pred c---CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCc---CCCCC--CC-CCCceeecccch
Confidence 3 2333444 899999999999998875 2 222333222211111100 00000 00 00100 111122
Q ss_pred -HHHHHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC-CC--eeEEEEccC----CCCCHHHHHHHHh
Q 012104 295 -QIGALAVAL-KQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT-EN--HLVLWDLRP----LGLTGNKVEKLCD 365 (471)
Q Consensus 295 -~iaa~a~al-~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~-~~--~~~~v~~~~----~~~~~~~~~~~L~ 365 (471)
.++..+.++ ..+.. +.++.......|+.++++.|.+ ++.+...+. .. |-..+++.+ .+++..++.+.|.
T Consensus 756 a~~l~~A~~Yi~~lG~-eLk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~ 833 (954)
T PRK12566 756 ASILPISWMYIAMMGP-QLADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM 833 (954)
T ss_pred HHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH
Confidence 122222222 33333 3555555567899999999977 565543322 12 445556542 3567788888888
Q ss_pred hcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 366 LCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 366 ~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
+.||....-++| ..+.+||...... +++|+++++++|..+.++..++
T Consensus 834 d~Gihapt~~fP------v~~~LmIepTE~e----skeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 834 DYGFHAPTMSFP------VPGTLMVEPTESE----SKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred HCCcEEeEEeec------cCCEEEEEeeeeC----CHHHHHHHHHHHHHHHHHHHHH
Confidence 999987653333 2578999876554 4899999999999888876655
No 218
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=1.6e-18 Score=175.63 Aligned_cols=290 Identities=16% Similarity=0.110 Sum_probs=185.7
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++..++.+| +++++++|.+. .+.+.||+.|+.+++.++++|||+|++.++.|++...... ......
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~-----~~~~~~ 128 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE-----WLARDF 128 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH-----HHHHhc
Confidence 455566666 57888999764 3557899999999999999999999999999986532110 001122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ +. -|.+++++.++ .++|+|++. .|+++...|+++|+++|+++|+++++|++|..|...
T Consensus 129 G--i~v~~v--d~----~~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~---- 195 (394)
T PRK07050 129 G--ITVRFY--DP----LIGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF---- 195 (394)
T ss_pred C--eEEEEE--CC----CCHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc----
Confidence 3 344444 21 14578888876 478988854 678889999999999999999999999999876532
Q ss_pred CCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC-CCCCCCCcHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~-~~~~g~p~~~~iaa~a~al 303 (471)
.|+. ++|+++.|++|++.|. .||+++++++ ++.+++..... .|. +.. ...+ ..++
T Consensus 196 -~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~--------------~~~~~~~~~~~~~G~--~~~--~~~a-~l~l 255 (394)
T PRK07050 196 -KPFEHGVDISVQALTKYQSGGSDVLMGATITADA--------------ELHAKLKLARMRLGI--GVS--ADDC-SLVL 255 (394)
T ss_pred -CHHHcCCeEEEEECCceecCCCCeeEEEEEECCH--------------HHHHHHHHHHHhcCC--CCC--HHHH-HHHH
Confidence 3444 7899999999998754 3788888654 56555543222 121 111 1122 1233
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce-EeeCC---------------CCCeeEEEEccCCCC---CHHHHHHH
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK-GYS-LVTGG---------------TENHLVLWDLRPLGL---TGNKVEKL 363 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~-i~~~~---------------~~~~~~~v~~~~~~~---~~~~~~~~ 363 (471)
+.+. .+....++..+|+..+++.|+++ ++. +..++ ...+++.+.+.. +. +..++.+.
T Consensus 256 r~l~--tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~-~~~~~~~~~~~~~ 332 (394)
T PRK07050 256 RGLP--SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDE-RYSPAQVDAFVEA 332 (394)
T ss_pred cCCC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC-CCCHHHHHHHHHc
Confidence 3332 35567788889999999999876 333 22111 124555566642 22 23445666
Q ss_pred HhhcCeEeccCCc-----CCCC-------CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 364 CDLCNITVNKNAV-----FGDS-------SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 364 L~~~gI~v~~~~~-----p~~~-------~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
|+..++.++-|.. |... .+...+-|||++ |+ ||.+.|.+-|.+++..
T Consensus 333 l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~sv------Gl--E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 333 LELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYI------GL--EDEADLIADLEQALEA 391 (394)
T ss_pred CCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEe------Cc--CCHHHHHHHHHHHHHH
Confidence 6677776665431 2110 011235789886 33 4666666666666653
No 219
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.82 E-value=1.1e-17 Score=173.69 Aligned_cols=315 Identities=15% Similarity=0.113 Sum_probs=191.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCC------------CCCCceeeecCChHHHHHHHHHHh----cC-----------------
Q 012104 73 EFIDEIENLCRSRALQTFHLD------------PTQWGVNVQPYSGSPANFAAYTAV----LE----------------- 119 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~------------~~~~~~~v~~~sGt~A~~~~~~al----l~----------------- 119 (471)
....++|+.+.++++++++.. ...+| +.+++||.||+.++.+. ++
T Consensus 125 pa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G--~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 125 KAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLG--AFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred cchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCe--EEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 345689999999999998521 11233 44678899998877542 21
Q ss_pred -----CCCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCCCCCCHHHHHHHhhh---CCCc--EEE--
Q 012104 120 -----PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSSTGYIDYDKLEEKALD---FRPK--LII-- 186 (471)
Q Consensus 120 -----pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~~~iD~~~le~~~~~---~~pk--lIi-- 186 (471)
++..|++.+..|.+.. +.+...|.+ .+++.+++| +++.+|+++|++.+.+ .+.+ .|+
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~---------kaa~~lglg~~~v~~vp~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vvat 272 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLG---------KAADVLGIGRDNLIAIKTD-ANNRIDVDALRDKCAELAEQNIKPLAIVGV 272 (522)
T ss_pred hhccCCceEEEECCCchHHHH---------HHHHHcCCCcccEEEEEeC-CCCcCCHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 2346776664443321 122334432 145566777 5689999999998863 2333 333
Q ss_pred EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC---CCCCCccEEEeCCCCcCCCCCe-EEEEeeCCC--
Q 012104 187 CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGP-- 260 (471)
Q Consensus 187 ~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~---~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~-- 260 (471)
.+.+.+|.+.|+++|+++|+++|+|+++|+||+.+........ ..+..+|.+++++|||+.+|.| |+++++++.
T Consensus 273 aGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~ 352 (522)
T TIGR03799 273 AGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM 352 (522)
T ss_pred ecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH
Confidence 2356799999999999999999999999999974433221111 1234689999999999999997 888887641
Q ss_pred CCCCCCCCCCcccchHhh--hhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEe
Q 012104 261 KPPKKGQPEGAVYDFEDK--INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLV 337 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~--i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~ 337 (471)
....... .+... -......+++|+..... ..+..+++.+...++++..++..+++++|.+.|++. +|+++
T Consensus 353 ~~~~~~~------~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~ 425 (522)
T TIGR03799 353 SAIEHHA------EYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELV 425 (522)
T ss_pred HHhccCc------chhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 0000000 00000 00000012344444333 356778888877899999999999999999999876 89997
Q ss_pred eCCCCCeeEEEEccCCCCC--------------H-------HHHHHHHhhcCeEe-ccCCcCCCC-CCCCCCeeEEecCC
Q 012104 338 TGGTENHLVLWDLRPLGLT--------------G-------NKVEKLCDLCNITV-NKNAVFGDS-SALAPGGVRIGTPA 394 (471)
Q Consensus 338 ~~~~~~~~~~v~~~~~~~~--------------~-------~~~~~~L~~~gI~v-~~~~~p~~~-~~~~~~~iRig~~~ 394 (471)
..+ ..+++.+.+.+.++. . ..+.+.+.+.|... +...+.... .....-.+|+.+..
T Consensus 426 ~~p-~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~n 504 (522)
T TIGR03799 426 TEP-ELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLAN 504 (522)
T ss_pred cCC-CccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecC
Confidence 643 344666665443321 0 12444555556553 322221100 00112469998732
Q ss_pred CCCcCCCHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGE 410 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~ 410 (471)
.+ .++++++.+.+
T Consensus 505 --p~-tt~~~i~~~l~ 517 (522)
T TIGR03799 505 --PL-TTHEILQDILD 517 (522)
T ss_pred --CC-CCHHHHHHHHH
Confidence 22 34788887654
No 220
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=2.1e-18 Score=172.69 Aligned_cols=228 Identities=15% Similarity=0.175 Sum_probs=154.6
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| ++++++.|.++ .+.++||+.|+.+++ .+++|||+|+++.+.|++.... +...
T Consensus 52 ~~p~~~~le----~~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~~---------~~~~ 112 (364)
T PRK07269 52 KNPTRAKLE----ETLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFRW---------FNQQ 112 (364)
T ss_pred CCccHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHHH---------HHHH
Confidence 345566777 56888888775 366789999999888 4679999999999888764311 0000
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
.... .+.+ ++..|++++++.+. .++|+|++. .||+|...|+++|+++|+++|+++++|+++..++ .
T Consensus 113 ~~~~---~~~~---~~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~-----~ 180 (364)
T PRK07269 113 EKEG---RFHF---TYANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPI-----Y 180 (364)
T ss_pred HhcC---cEEE---EecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccc-----c
Confidence 0000 0111 24568999999886 478998754 6789999999999999999999999999986543 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|++ ++|++++|+||++.|+. ||+|+++++ ++.+++..... ..|......-+++ +++
T Consensus 181 ~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~--------------~l~~~~~~~~~--~~G~~~s~~~a~l--~~~ 242 (364)
T PRK07269 181 QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL--------------ELYEKLFYNLN--TTGAVLSPFDSYL--LMR 242 (364)
T ss_pred CCchhhCCcEEEecCceeccCCCcccceEEEeCcH--------------HHHHHHHHHHH--HhCCCCCHHHHHH--HHc
Confidence 35566 89999999999998864 788888764 55555543211 1122112222222 344
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC-Cc-eEeeCCCCCeeEEEEc
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK-GY-SLVTGGTENHLVLWDL 350 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~-~i~~~~~~~~~~~v~~ 350 (471)
.+. .+....++..+|++.+++.|++. ++ +++.++.+ -++.+.+
T Consensus 243 ~L~--tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~g-g~~sf~~ 287 (364)
T PRK07269 243 GLK--TLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKG-GMISFKV 287 (364)
T ss_pred CCC--cHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcC-cEEEEEE
Confidence 433 36778888999999999999986 33 44434433 3445554
No 221
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.82 E-value=1.3e-18 Score=183.42 Aligned_cols=301 Identities=16% Similarity=0.125 Sum_probs=196.0
Q ss_pred HHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 81 ~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
.+++.++++||++... ..+++.|.+|.++++++++|||+||+...+|-+.+ |+. +.++|. .++++.
T Consensus 178 eAq~~AA~~fgAd~ty----FlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~-hga-------LiLsGa--~PVYl~ 243 (720)
T PRK13578 178 DAQKHAAKVFNADKTY----FVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH-HGA-------LIQAGA--TPVYLE 243 (720)
T ss_pred HHHHHHHHHhCCCceE----EEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH-HHH-------HHHcCC--eEEEee
Confidence 4678899999999853 22334457999999999999999999996654432 321 233443 333332
Q ss_pred --ecCC--CCCCCH-----HHHHHHhhhC--------CC-cEEE-EcCCCCCccccHHHHHHH-HHHhCCEEEEeccccc
Q 012104 161 --VNSS--TGYIDY-----DKLEEKALDF--------RP-KLII-CGGSAYPRDWDYARFRAV-ADKCGALLLCDMAHIS 220 (471)
Q Consensus 161 --v~~~--~~~iD~-----~~le~~~~~~--------~p-klIi-~~~s~~g~~~d~~~i~~i-a~~~g~~livD~a~~~ 220 (471)
.++- -+.|++ +.|++.++++ +| |+++ ++.+-+|...|++.|+++ |+.++ +|++|+||++
T Consensus 244 P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 244 TARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh
Confidence 1110 134565 4499888765 33 6554 568889999999999998 78888 9999999987
Q ss_pred hhhcccc---C-CCCCC-Ccc----EEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCC
Q 012104 221 GLVAAQE---A-ANPFE-YCH----IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGG 290 (471)
Q Consensus 221 glv~~g~---~-~~p~~-~aD----iv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~ 290 (471)
.+.+... . ++.+. ++| +++-|+||+|++.. +++|..++.... |..- |--.++++.+..-..+++
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~----g~~~--~v~~~r~~~al~m~qSTS 396 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIK----GQAR--YCPHKRLNNAFMLHASTS 396 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccc----cccc--cCCHHHHHHHHHHHcCCC
Confidence 7665442 2 23344 789 99999999999975 567766543100 0000 001245555433334578
Q ss_pred CcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-HcC-CceEeeC---------------------------C-
Q 012104 291 PHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL-TGK-GYSLVTG---------------------------G- 340 (471)
Q Consensus 291 p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L-~~~-g~~i~~~---------------------------~- 340 (471)
|+...+|++.+|-..+..+.-++..+..++.+..+++.| +.. +|+++.. +
T Consensus 397 PsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~ 476 (720)
T PRK13578 397 PFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGE 476 (720)
T ss_pred hHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCc
Confidence 999999999987776654344677788888888888888 433 6665410 0
Q ss_pred --------------CCCeeEEEEccCCCCC------------HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 341 --------------TENHLVLWDLRPLGLT------------GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 341 --------------~~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
-|.--+++.+ .|++ +..+.+.|++.||.+.... ...+=+
T Consensus 477 ~whgf~~~~~~~~~lDP~KltI~t--~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---------~~~vL~---- 541 (720)
T PRK13578 477 KWHGFEGYAEDQYFVDPCKLLLTT--PGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---------LNSILF---- 541 (720)
T ss_pred cccccccccccccccCCceEEEEc--CCcCcccccccccCccHHHHHHHHHHcCCEEEecC---------CCeEEE----
Confidence 0111223333 2444 7889999987799987642 122222
Q ss_pred CCCcCCCHHHHHHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+.+.|.++++++++.+.|.+.-+
T Consensus 542 l~s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 542 LLTPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred EeCCCCCHHHHHHHHHHHHHHHH
Confidence 34556778999999998877633
No 222
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=4.1e-18 Score=172.57 Aligned_cols=250 Identities=16% Similarity=0.181 Sum_probs=164.3
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+...+.+| +++++++|++. .+.++||+.|+.+++. +++|||+|++.++.|++.+.... ..+...|
T Consensus 53 ~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~-----~~~~~~G 117 (390)
T PRK08064 53 NPTREALE----DIIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT-----EVLSRFG 117 (390)
T ss_pred ChhHHHHH----HHHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH-----HHHHHcC
Confidence 34555665 67889999875 3557899999988886 78999999999999986542110 0111233
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
.+++.+++ .|++++++.+.+ ++|+|++. .||+|...|+++|.++|+++|+++++|++|..+.. .
T Consensus 118 --~~v~~v~~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 --IEHTFVDM------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred --CEEEEECC------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 34444332 378999988864 78988754 67899999999999999999999999999875431 2
Q ss_pred CCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHH
Q 012104 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ 305 (471)
Q Consensus 230 ~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~ 305 (471)
.|++ ++|+++.|+||++.|+. +|+++++++ ++.+++.....+. |......-+.+ +++.
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~--------------~~~~~l~~~~~~~--g~~~~~~~a~l--~~~g 245 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE--------------ELAQKLYFLQNSF--GAVLGVQDCWL--VLRG 245 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH--------------HHHHHHHHHHHhc--CCCCCHHHHHH--HHcc
Confidence 3444 78999999999998875 488777653 4555555432221 22111111222 2333
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcCC-c-eEeeCCC---------------CCeeEEEEccCCCCCHHHHHHHHhhcC
Q 012104 306 ASTPAFKAYAKQVKANAVALGNYLTGKG-Y-SLVTGGT---------------ENHLVLWDLRPLGLTGNKVEKLCDLCN 368 (471)
Q Consensus 306 ~~~~~~~~~~~~~~~na~~l~~~L~~~g-~-~i~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~~~g 368 (471)
+. .+....++..+|+..+.+.|++++ + ++..++- .+.++.+++. + .+++.++++..+
T Consensus 246 l~--tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~--~--~~~~~~f~~~l~ 319 (390)
T PRK08064 246 LK--TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ--S--EEAVRQFVSHVK 319 (390)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC--C--HHHHHHHHHhCC
Confidence 22 345677788999999999999863 2 2322211 1224445553 2 356778888888
Q ss_pred e---EeccC
Q 012104 369 I---TVNKN 374 (471)
Q Consensus 369 I---~v~~~ 374 (471)
+ .++-|
T Consensus 320 l~~~~~s~G 328 (390)
T PRK08064 320 LPVFAVSLG 328 (390)
T ss_pred cceEcccCC
Confidence 7 44444
No 223
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.82 E-value=1.2e-17 Score=170.45 Aligned_cols=314 Identities=18% Similarity=0.206 Sum_probs=189.1
Q ss_pred CCCcHHHHHHHhhhhhccCCCCCC---CCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh
Q 012104 41 NFTSFAVIEALGSALTNKYSEGMP---GNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (471)
Q Consensus 41 n~~s~~v~~a~~~~l~~~~~~g~~---~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al 117 (471)
..+|++|++++...+.+.....|. +.| | ...+.+ ++.+++++|+++ + +.++||+.|+.+++.+
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~---g-~r~~~l----e~~lA~l~gae~----a-lvv~sg~aAi~l~l~~- 156 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKR---G-SRYSHV----EGLLCELTGAED----A-LVVNNNAAAVLLALNT- 156 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhcccccccc---c-hHHHHH----HHHHHHHhCCCc----E-EEECCHHHHHHHHHHH-
Confidence 456899999998777543211111 111 1 223344 467899999986 3 4467999999888854
Q ss_pred cCCCCEEEEeCCC---CCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-CCC--
Q 012104 118 LEPHDRIMGLDLP---SGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-GSA-- 191 (471)
Q Consensus 118 l~pGD~Vl~~~~~---~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~s~-- 191 (471)
+.+||+|++.+.. |||..... . .+...| .+++.++.+ ...|++++++++. .++++|+.. .++
T Consensus 157 l~~GdeVIvs~~e~v~~ggs~~i~----~--~~~~~G--~~~~~v~~~---~~~~l~dle~aI~-~~T~lv~~~h~sN~~ 224 (454)
T TIGR00474 157 LAKGKEVIVSRGELVEIGGSFRIP----D--VMEQSG--AKLVEVGTT---NRTHLKDYEDAIT-ENTALLLKVHTSNYR 224 (454)
T ss_pred hCCcCEEEECCChhhhhcchhhHH----H--HHHHcC--CEEEEeCCC---CCCCHHHHHHhcC-cCCEEEEEEccCccc
Confidence 7899999998865 33332110 0 112234 344444332 3468999999886 478887744 333
Q ss_pred -CC--ccccHHHHHHHHHHhCCEEEEeccccchhhcc----c--cCC---CCCC-CccEEEeCCCCcCCCCCeEEEEeeC
Q 012104 192 -YP--RDWDYARFRAVADKCGALLLCDMAHISGLVAA----Q--EAA---NPFE-YCHIVTTTTHKSLRGPRAGMIFYRK 258 (471)
Q Consensus 192 -~g--~~~d~~~i~~ia~~~g~~livD~a~~~glv~~----g--~~~---~p~~-~aDiv~~s~~K~l~GprgG~i~~~~ 258 (471)
.| ...|+++|+++|+++|+++++|.+ +|.... | ..| .++. ++|++++|+||+|.||.+|++++++
T Consensus 225 ~~G~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~ 302 (454)
T TIGR00474 225 IVGFTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK 302 (454)
T ss_pred ccCCCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH
Confidence 24 478999999999999999999975 343311 1 112 2233 7999999999999999999999887
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCCCC-CCCcHHHHHHHHHHHHHhccHHH-----------HHHHHHHHHHHHHHH
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQ-GGPHNHQIGALAVALKQASTPAF-----------KAYAKQVKANAVALG 326 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~-g~p~~~~iaa~a~al~~~~~~~~-----------~~~~~~~~~na~~l~ 326 (471)
+ +.+++... |... --..-..++++..+++....+.- ....++..+++..++
T Consensus 303 ~---------------~i~~l~~~--~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la 365 (454)
T TIGR00474 303 E---------------LIERLKKN--PLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLA 365 (454)
T ss_pred H---------------HHHhhhhc--hhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHH
Confidence 3 33333221 1000 00011233455555555443210 112336777899999
Q ss_pred HHHHcC---Cc--eEee------CCC--CC--eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 327 NYLTGK---GY--SLVT------GGT--EN--HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 327 ~~L~~~---g~--~i~~------~~~--~~--~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
+.|++. |+ .+.. ||+ +. .-..+.+.+.+.+..++++.|++....|-.. + ..+.+.+-
T Consensus 366 ~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~-------~~~~~~ld 437 (454)
T TIGR00474 366 KRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR-I-------EDDRFLLD 437 (454)
T ss_pred HHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE-E-------ECCEEEEE
Confidence 999763 33 3332 221 11 1233445555778899999999876433221 1 13456665
Q ss_pred cCCCCCcCCCHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i 412 (471)
+ |-+.++|++.+++.+
T Consensus 438 ~-----r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 438 L-----RTLLEDEEELLIEAL 453 (454)
T ss_pred e-----CcCCHHHHHHHHHHh
Confidence 4 446688999988765
No 224
>PRK08637 hypothetical protein; Provisional
Probab=99.82 E-value=1.1e-17 Score=169.90 Aligned_cols=276 Identities=15% Similarity=0.142 Sum_probs=164.7
Q ss_pred eecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhh-
Q 012104 101 VQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKAL- 178 (471)
Q Consensus 101 v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~- 178 (471)
|..++| ++|+..++.++++|||+|++.+|.|+.+.... ....| .+++.+++..+++.+|++++++.++
T Consensus 72 I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~--------~~~~g--~~vv~v~~~~~~~~~d~~~l~~~~~~ 141 (388)
T PRK08637 72 PIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF--------NTRRG--AEIVTYPIFDEDGGFDTDALKEALQA 141 (388)
T ss_pred eeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH--------HHhcC--CEEEEecccCCCCcCCHHHHHHHHHh
Confidence 444555 57999999999999999999999998764210 01233 3556666532445789999999876
Q ss_pred -hCCCc-EEE-Ec-CCCCCccccHHHHH---HHHHH-----hCCEEEEeccccchhhccccCCCC-C----C-CccE---
Q 012104 179 -DFRPK-LII-CG-GSAYPRDWDYARFR---AVADK-----CGALLLCDMAHISGLVAAQEAANP-F----E-YCHI--- 237 (471)
Q Consensus 179 -~~~pk-lIi-~~-~s~~g~~~d~~~i~---~ia~~-----~g~~livD~a~~~glv~~g~~~~p-~----~-~aDi--- 237 (471)
..+++ +++ ++ +||+|..++.+++. ++|++ ++++||+|++|. ++++.+..+.+ + + ...+
T Consensus 142 ~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~-~l~~~~~~~~~~~~~~~~~~~~vi~i 220 (388)
T PRK08637 142 AYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYF-GLFYEDSYKESLFAALANLHSNILAV 220 (388)
T ss_pred hccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccch-hcccCCccchhhHHHhhcccccceEE
Confidence 22344 444 44 89999998876554 55554 899999999997 77665432211 1 1 1122
Q ss_pred EEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhh----cCCCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 238 VTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF----AVFPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 238 v~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~----~~~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
++.|++|. ++|.|.||++++.... ++ -++.+.+.. .......+.+.. ..++...++. .+.+
T Consensus 221 ~~~s~SK~~~~pGlRlG~~~~~~~~~-----~~----~~l~~~~~~~~~~~~~~~~~~~s~~-~q~a~~~~l~---~~~~ 287 (388)
T PRK08637 221 KLDGATKEEFVWGFRVGFITFGTKAG-----SS----QTVKEALEKKVKGLIRSNISNGPHP-SQSAVLRALN---SPEF 287 (388)
T ss_pred EeccccccCCCcccceEEEEEccccC-----Cc----HHHHHHHHHHHHHHhhcccCCCCcH-HHHHHHHHhC---CHHH
Confidence 34599996 7899999998753000 00 034444332 111111122222 3333333342 2334
Q ss_pred HH----HHHHHHHHHHHHHHHHHcC----CceEeeCCCCCeeEEEEccCCCCCHHHHHHHH-hhcCeEeccCCcCCCCCC
Q 012104 312 KA----YAKQVKANAVALGNYLTGK----GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLC-DLCNITVNKNAVFGDSSA 382 (471)
Q Consensus 312 ~~----~~~~~~~na~~l~~~L~~~----g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L-~~~gI~v~~~~~p~~~~~ 382 (471)
.+ ......++.+.+.+.|++. ++.+. .+..+.++|+++. +.+..++.+.| +++||.+.. .
T Consensus 288 ~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~----~---- 356 (388)
T PRK08637 288 DKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIA----L---- 356 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-cccceEEEEecCC--hHHHHHHHHHHhhhcceEEEe----c----
Confidence 33 2333455556667777654 45554 3345678888875 34566776555 678998753 1
Q ss_pred CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 383 LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 383 ~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..+++||++.. ..++++++..+.|.++++
T Consensus 357 -~~~~iRi~~~~-----~~~~~i~~~~~~l~~~~~ 385 (388)
T PRK08637 357 -NETDLRIAFSC-----VEEEDIPELFDSIYKAIK 385 (388)
T ss_pred -cCCceEEEeec-----CCHHHHHHHHHHHHHHHH
Confidence 24689999843 235677777776666654
No 225
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.82 E-value=3e-18 Score=173.18 Aligned_cols=221 Identities=19% Similarity=0.211 Sum_probs=149.2
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccc
Q 012104 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (471)
Q Consensus 62 g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 141 (471)
++...|| ++...+.+| +++++++|++. + +.+.||+.|+.+++.++++|||+|++.++.|++..... .
T Consensus 45 ~~~y~r~--~~p~~~~le----~~la~l~g~~~----~-~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~--~ 111 (380)
T TIGR01325 45 GFVYSRY--ANPTVAAFE----ERIAALEGAER----A-VATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFI--S 111 (380)
T ss_pred CcceecC--CCchHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHH--H
Confidence 3444454 234456666 57888999865 3 55789999999999999999999999988887643210 0
Q ss_pred cCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 142 ~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
..+...| .++..++. .|++++++.+. .++++|++. .||+|...|+++|.++|+++|+++++|++|.
T Consensus 112 ---~~~~~~g--~~v~~v~~------~d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~ 179 (380)
T TIGR01325 112 ---EILPRFG--IEVSFVDP------TDLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFA 179 (380)
T ss_pred ---HHHHHhC--CEEEEECC------CCHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc
Confidence 0011223 33333322 27899998886 378988864 6789999999999999999999999999997
Q ss_pred chhhccccCCCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHH
Q 012104 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQ 295 (471)
Q Consensus 220 ~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ 295 (471)
.+.. ..|++ ++|++++|+||++.|+ .||++++++ ++.+.+...... .|......
T Consensus 180 ~~~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~---------------~~~~~l~~~~~~--~g~~~~p~ 237 (380)
T TIGR01325 180 TPVL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE---------------ELMAEVAVYLRH--TGPAMSPF 237 (380)
T ss_pred cccc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCH---------------HHHHHHHHHHHh--hCCCCCHH
Confidence 4432 23455 7899999999999875 258888776 344444332111 12211111
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC
Q 012104 296 IGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG 333 (471)
Q Consensus 296 iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g 333 (471)
.+ +.+++.+. .+....++..+|++.+.+.|++++
T Consensus 238 -~a-~~~l~~l~--tl~~r~~~~~~~a~~la~~L~~~p 271 (380)
T TIGR01325 238 -NA-WVLLKGLE--TLSLRMQKQFDSALAIAEWLQAQP 271 (380)
T ss_pred -HH-HHHHhccC--cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 12 22333332 355678888999999999999873
No 226
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=7.3e-18 Score=169.18 Aligned_cols=289 Identities=12% Similarity=0.107 Sum_probs=183.2
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ++++++-|.+. .+.+.||+.|+.+++.++++|||+|++.+..|++..... . ..+...
T Consensus 60 ~nPt~~~le----~~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~--~---~~l~~~ 125 (395)
T PRK08114 60 GTLTHFSLQ----EAMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC--S---KILSKL 125 (395)
T ss_pred CChhHHHHH----HHHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH--H---HHHHhc
Confidence 567777887 57788888775 355778999999999999999999999987777643210 0 001112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhC--CEEEEeccccchhhccc
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCG--ALLLCDMAHISGLVAAQ 226 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g--~~livD~a~~~glv~~g 226 (471)
| .++..+ + ..|.++++++++. ++|+|++. .|+++.+.|+++|+++|+++| +++++|.++++++.
T Consensus 126 G--i~v~~v--d----~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~--- 193 (395)
T PRK08114 126 G--VTTTWF--D----PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL--- 193 (395)
T ss_pred C--cEEEEE--C----CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc---
Confidence 3 344443 2 2478999999864 78999876 688999999999999999985 99999999987643
Q ss_pred cCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHH
Q 012104 227 EAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 227 ~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~a 302 (471)
..|++ ++|++++|.||+|.|+. +|+++.++ ++.+.+..... ..|......-+.+ .
T Consensus 194 --~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~---------------~~~~~l~~~~~--~~G~~~~p~~a~l--~ 252 (395)
T PRK08114 194 --FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA---------------RCWEQLRENSY--LMGQMVDADTAYM--T 252 (395)
T ss_pred --cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH---------------HHHHHHHHHHH--hccCCCCHHHHHH--H
Confidence 35666 79999999999999983 57665554 33333332211 1122111111222 2
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcCC-c-eEeeCCC---------------CCeeEEEEccCCCCCHHHHHHHHh
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGKG-Y-SLVTGGT---------------ENHLVLWDLRPLGLTGNKVEKLCD 365 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~-~i~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~ 365 (471)
++-+. -+.-+.++..+|+..+++.|+++. + +|..++- .+-++.+++.. +.+.+++.++++
T Consensus 253 ~rgl~--TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~-~~~~~~~~~f~~ 329 (395)
T PRK08114 253 SRGLR--TLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK-KLTDEQLANYLD 329 (395)
T ss_pred HcCCC--cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC-cccHHHHHHHHH
Confidence 33333 355678889999999999999873 2 2333221 12355566642 223455666666
Q ss_pred hcCe---EeccCC----c----CCCC--------CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 366 LCNI---TVNKNA----V----FGDS--------SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 366 ~~gI---~v~~~~----~----p~~~--------~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
...+ .++-+. + |... .....+.||+++ |+ ||.+.|.+-|.+++.
T Consensus 330 ~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSv------Gl--Ed~~DLi~Dl~~Al~ 392 (395)
T PRK08114 330 NFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHI------GL--EDVDDLIADLAAGFA 392 (395)
T ss_pred hCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEe------cc--CCHHHHHHHHHHHHH
Confidence 5554 333331 1 1000 001235789886 32 466666666666654
No 227
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=1.2e-17 Score=169.22 Aligned_cols=309 Identities=15% Similarity=0.163 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhc--C-CCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVL--E-PHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 75 ~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all--~-pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
.-.+.+...+.+++++|++.... .+.+++|| .++.+++.++- + +||.|++++.+|.+.. +.+...
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~---------kAi~~~ 171 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI---------KAISTA 171 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH---------HHHHHc
Confidence 34455555678889999983211 24456777 57877777763 2 6999999886543221 234455
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc-CCCC--CccccHHHHHHHHHHhCCEEEEeccccchhhcc
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG-GSAY--PRDWDYARFRAVADKCGALLLCDMAHISGLVAA 225 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~-~s~~--g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~ 225 (471)
|....+++..++++++.+|+++|++++.+. +..+++++ .+.+ +...|+++|+++|+++|+++++|+||+.+....
T Consensus 172 G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~ 251 (444)
T TIGR03531 172 GFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKY 251 (444)
T ss_pred CCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhh
Confidence 654333332246678999999999999753 23444443 3323 367899999999999999999999997543221
Q ss_pred ccCC-CCCC--CccEEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHH
Q 012104 226 QEAA-NPFE--YCHIVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAV 301 (471)
Q Consensus 226 g~~~-~p~~--~aDiv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~ 301 (471)
...+ ..+. .+|++++|+||++..|- ||+++++++ ++.+.+... +++.. . ..... .+++
T Consensus 252 ~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~--------------el~~~i~~~-y~g~~-~-~s~~~-~~~~ 313 (444)
T TIGR03531 252 MELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE--------------NFIQEISKS-YPGRA-S-ASPSL-DVLI 313 (444)
T ss_pred hhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH--------------HHHHHHHHh-ccCCC-C-ChHHH-HHHH
Confidence 1111 1222 47999999999976654 677777664 566666543 23322 1 11222 2333
Q ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHcC----CceEeeCCCCCee-EEEEccCC-CCCHHHHHHHHhhcCeEeccCC
Q 012104 302 ALKQASTPAFKAYAKQVKANAVALGNYLTGK----GYSLVTGGTENHL-VLWDLRPL-GLTGNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 302 al~~~~~~~~~~~~~~~~~na~~l~~~L~~~----g~~i~~~~~~~~~-~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~ 375 (471)
++..+...++++..++..++++++.+.|++. |-+++.. ..|.+ +-+.+... +-+...+-..|-.++|.-....
T Consensus 314 ~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~-~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v 392 (444)
T TIGR03531 314 TLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDT-PENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVV 392 (444)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecC-CCCceeEEEecccccccCHHHHHHHHHhCCCCCceee
Confidence 4445556788999999999999999988764 7777532 23433 23343321 2345567677766666422211
Q ss_pred cCCCCCCCCCCeeEE---ec-------C---CCCCcCCCHHHHHHHHHHHHHH
Q 012104 376 VFGDSSALAPGGVRI---GT-------P---AMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 376 ~p~~~~~~~~~~iRi---g~-------~---~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.|++.... ++..+ |. + +.+..|++.+|++.+.+.|+++
T Consensus 393 ~~~~~~~~--~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 393 TNGDSKTV--GGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred cCCCceEE--CCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 23321111 11111 11 1 1335688999999999988765
No 228
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=3.3e-18 Score=173.64 Aligned_cols=214 Identities=17% Similarity=0.180 Sum_probs=148.7
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|.+. .+.+.||+.|+..++.++++|||+|++.+..|++.+... . ..+...
T Consensus 68 ~~p~~~~le----~~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~--~---~~~~~~ 133 (403)
T PRK07810 68 GNPTVSMFE----ERLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVC--N---EILPRW 133 (403)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHH--H---HHHHHc
Confidence 344566776 57889999875 466889999999999999999999999987776543210 0 011122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.++ ..|++++++++++ ++++|++. .||+|...|+++|+++|+++|+++++|++|+.+...
T Consensus 134 G--~~v~~vd------~~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~---- 200 (403)
T PRK07810 134 G--VETVFVD------GEDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQ---- 200 (403)
T ss_pred C--cEEEEEC------CCCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccC----
Confidence 3 3444442 2489999998864 78988864 678999999999999999999999999999866432
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
.|++ ++|++++|+||++.|+. ||+++++++ .+.+++..... . .|.......+++ +++
T Consensus 201 -~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~--------------~~~~~l~~~~~-~-~g~~~s~~~a~l--~l~ 261 (403)
T PRK07810 201 -RGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE--------------YIDGPVQKLMR-H-TGPALSAFNAWV--LLK 261 (403)
T ss_pred -ChhhcCCcEEEccCCceecCCcCceeEEEEeChH--------------HHHHHHHHHHH-H-hCCCCCHHHHHH--HHh
Confidence 3444 79999999999987643 688888763 23333332111 1 122222222222 333
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+. .+....++..+|+..+++.|++.
T Consensus 262 ~L~--tl~~R~~~~~~~a~~~a~~L~~~ 287 (403)
T PRK07810 262 GLE--TLALRVRHSNASALRIAEFLEGH 287 (403)
T ss_pred ccC--cHHHHHHHHHHHHHHHHHHHhcC
Confidence 332 46678888899999999999976
No 229
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.81 E-value=8.8e-18 Score=167.58 Aligned_cols=339 Identities=15% Similarity=0.153 Sum_probs=211.2
Q ss_pred EecCCCCCcHH-HHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 36 LIASENFTSFA-VIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 36 li~s~n~~s~~-v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
+.+++.-.-|. .++++.+.+-. +.+-+.++.+.+. .+.+.++++|+.+.+ +.+.+.+.|||.++.+++
T Consensus 7 f~~gp~~~~~~~~~~~~~~~~~~---------~~HRs~~F~~i~~-e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~ 75 (374)
T TIGR01365 7 FSSGPCAKRPGWSIEELKNAPLG---------RSHRSKLGKEKLA-EAIKKTREMLGVPAD-YLIGIVPASDTGAVEMAL 75 (374)
T ss_pred cCCCccCCCchhhHHHHhhhhcc---------cCcCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHH
Confidence 44555555566 55555432111 1122446666655 467899999998543 336777899999999999
Q ss_pred HHhc-CCCCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCCC
Q 012104 115 TAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSA 191 (471)
Q Consensus 115 ~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s~ 191 (471)
.+++ ++||+|++.. .++..+.. ..+...|.. +..+. .+ .+..+|+++++. +..+.+ .+.++
T Consensus 76 ~nl~~~~g~~vLv~g-----~FG~r~~~---eia~~~g~~~v~~l~--~~-~g~~~~~~~ve~-----~~~v~~vhnETS 139 (374)
T TIGR01365 76 WSMLGCRGVDVLAWE-----SFGKGWVT---DVTKQLKLPDVRVLE--AE-YGKLPDLKKVDF-----KNDVVFTWNGTT 139 (374)
T ss_pred HHcCCCCCCeEEEEC-----HHHHHHHH---HHHHhcCCCCcEEEc--CC-CCCCCCHHHcCC-----CCCEEEecCCCc
Confidence 9999 5899999753 22222210 011123432 33333 22 456889999873 223444 34778
Q ss_pred CCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCC-CCCCCCC-
Q 012104 192 YPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPK-PPKKGQP- 268 (471)
Q Consensus 192 ~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~-~~~~~~~- 268 (471)
+|...|++++...+ +++++++|+.-++|. .|.+++..|++++|.+|+|.+|.| ++++.++... .......
T Consensus 140 TGv~npv~~i~~~~--~~~lliVDavSs~g~-----~~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y 212 (374)
T TIGR01365 140 SGVRVPNGDFIPAD--REGLTICDATSAAFA-----QDLDYHKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPA 212 (374)
T ss_pred hheecccccccccc--CCCcEEEEccchhcC-----CCCChhHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCC
Confidence 99999987655322 489999999876552 344455799999999999999988 6777766421 1111010
Q ss_pred -CCc-ccchHh--hhh-hcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCC-ceEeeC--
Q 012104 269 -EGA-VYDFED--KIN-FAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKG-YSLVTG-- 339 (471)
Q Consensus 269 -~i~-~~~l~~--~i~-~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g-~~i~~~-- 339 (471)
.+. .+++.. ... ...-..+..+|..+.+.++..+++.+.++ +++...++..++++.+++.+++.| +.++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~ 292 (374)
T TIGR01365 213 WPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETP 292 (374)
T ss_pred CCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCCh
Confidence 000 001100 000 00001233467777777777778776664 689999999999999999999998 776542
Q ss_pred CCCCe-eEEEEccCCCC-----C-----HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 340 GTENH-LVLWDLRPLGL-----T-----GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 340 ~~~~~-~~~v~~~~~~~-----~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
...++ .+.+.+...++ + ..++.+.|.+.||.+.++..+ .....||||+-. . ++.+|++.+
T Consensus 293 ~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~-----~~~~~fRIg~~G--~--i~~~di~~l 363 (374)
T TIGR01365 293 EIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYR-----DAPSGLRIWCGA--T--VEKSDLECL 363 (374)
T ss_pred hhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccc-----cCCCceEEecCC--c--CCHHHHHHH
Confidence 11233 23344433334 2 678899999999999765322 224789999832 2 568999999
Q ss_pred HHHHHHHHH
Q 012104 409 GEFLHRAVT 417 (471)
Q Consensus 409 ~~~i~~~l~ 417 (471)
.++|+=+.+
T Consensus 364 ~~~l~~~~~ 372 (374)
T TIGR01365 364 CPWLDWAFA 372 (374)
T ss_pred HHHHHHHHh
Confidence 999976654
No 230
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.81 E-value=1.1e-17 Score=166.17 Aligned_cols=262 Identities=18% Similarity=0.155 Sum_probs=168.3
Q ss_pred HHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeec
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVN 162 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~ 162 (471)
+.+++.+|.+ +|..++|+ +|+..++ ++.|||+|++.+|+|+++.. .+...|. +++.+++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~---------~~~~~g~--~~~~v~~- 115 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH---------AWRRAGH--QVRELDE- 115 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH---------HHHHcCC--eEEEech-
Confidence 5567777864 35556666 5776664 46899999999999987642 1223343 4444432
Q ss_pred CCCCCCCHHHHHHHhhhCCCcEE-EEc-CCCCCccccHHHHH---HHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc
Q 012104 163 SSTGYIDYDKLEEKALDFRPKLI-ICG-GSAYPRDWDYARFR---AVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH 236 (471)
Q Consensus 163 ~~~~~iD~~~le~~~~~~~pklI-i~~-~s~~g~~~d~~~i~---~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD 236 (471)
+++++.+. +++++ +++ +||+|..++.+++. ++|+++|++||+|++|. .+...... ..+. +..
T Consensus 116 --------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~ 183 (330)
T PRK05664 116 --------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPG 183 (330)
T ss_pred --------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCC
Confidence 34555553 56654 466 78999999876665 45678899999999985 33211000 1112 222
Q ss_pred -EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 237 -IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 237 -iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
+++.|++|+ ++|.|.||+++++ ++.+.+.....+... +.....+...+|.. ....++
T Consensus 184 vi~~~SfSK~~gl~GlRiG~~v~~~---------------~l~~~~~~~~~~~~~---~~~~~~~~~~~L~~--~~~~~~ 243 (330)
T PRK05664 184 LIVLRSFGKFFGLAGARLGFVLAEP---------------ALLRALAELLGPWTV---SGPTRWLAQAALAD--TPWQRR 243 (330)
T ss_pred EEEEeeccccccCCCcceEEEEeCH---------------HHHHHHHHhcCCCCC---CHHHHHHHHHHHhC--hHHHHH
Confidence 889999999 4899999999986 566666554333221 11222233334432 123455
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecC
Q 012104 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTP 393 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~ 393 (471)
..+++.++.+.+.+.|++.|+... + +...++|+.+. +..++.+.|.++||.|.. ++ .++++||++.
T Consensus 244 ~~~~~~~~r~~l~~~L~~~~~~~~-~-~~~~f~~~~~~----~~~~~~~~l~~~gi~v~~---f~-----~~~~iRis~~ 309 (330)
T PRK05664 244 QRERLLAASQRLAALLRRHGLTPA-G-GCALFQWVRTE----DAAALHEFLARRGILTRL---FE-----QPASLRFGLP 309 (330)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccc-C-CcceEEEEecC----CHHHHHHHHHHCCeEEEE---CC-----CCCeEEEECC
Confidence 667777788999999998887542 2 22346677642 567888889999999963 22 1369999974
Q ss_pred CCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 394 AMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 394 ~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
. +.++++++.+.|+++.+
T Consensus 310 ~------~~~~~~~l~~al~~~~~ 327 (330)
T PRK05664 310 A------DEADWARLDQALLAYRK 327 (330)
T ss_pred C------CHHHHHHHHHHHHHHHh
Confidence 2 36789999999877654
No 231
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.81 E-value=6.9e-18 Score=170.22 Aligned_cols=212 Identities=22% Similarity=0.245 Sum_probs=146.6
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +.+++++|.+. .+.+.||++|+.+++.++++|||+|++.++.|++.+... ....
T Consensus 49 ~~p~~~~le----~~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~--------~~~~ 111 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLL--------NALA 111 (382)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH--------HHHH
Confidence 344556666 56788888643 355778889999999999999999999999998654211 0111
Q ss_pred cc-eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcccc
Q 012104 151 SI-YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE 227 (471)
Q Consensus 151 g~-~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~ 227 (471)
+. ..++... + ..|++++++++.. ++|+|++. +||+|...|+++|+++|+++|+++++|++|..+..
T Consensus 112 ~~~~~~v~~~--d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~---- 180 (382)
T TIGR02080 112 KKGCFRVLFV--D----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL---- 180 (382)
T ss_pred hhcCeEEEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc----
Confidence 11 1222222 2 2489999998864 78988753 78999999999999999999999999999975532
Q ss_pred CCCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHH
Q 012104 228 AANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 228 ~~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~a 302 (471)
..|+. ++|++++|+||++.|+ ++|+++++++ ++.+++.... ..|...+|. -+.+ +
T Consensus 181 -~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~--------------~~~~~l~~~~~~~g~~~sp~---~a~l--~ 240 (382)
T TIGR02080 181 -QNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP--------------QVAEELAWWANNLGVTGGAF---DSYL--T 240 (382)
T ss_pred -CCchhhCCCEEEeecceeccCCCCceeEEEEeCCH--------------HHHHHHHHHHHccCCCCCHH---HHHH--H
Confidence 23455 7899999999998775 4788887654 4555554321 112222221 1222 2
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
++.+. .+..+.++..+|+..+++.|++.
T Consensus 241 lr~l~--tl~~R~~~~~~na~~~a~~L~~~ 268 (382)
T TIGR02080 241 LRGLR--TLVARMRLQQRNAQAIVEYLQTQ 268 (382)
T ss_pred Hcccc--hHHHHHHHHHHHHHHHHHHHHhC
Confidence 44332 35556778889999999999976
No 232
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.81 E-value=2.5e-18 Score=181.18 Aligned_cols=293 Identities=14% Similarity=0.070 Sum_probs=199.8
Q ss_pred HHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 81 ~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
.+++.++++||+++.. ..+++.|.+|.++++++++|||+||+...+|-+.+ |+ +.++|. .++.+.
T Consensus 199 eAe~~AA~~fgAd~ty----fvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-ha--------Lilsga--~PVYl~ 263 (714)
T PRK15400 199 EAEEYIARVFNADRSY----MVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT-HL--------MMMSDV--TPIYFR 263 (714)
T ss_pred HHHHHHHHHhCCCcEE----EEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCC--eEEEec
Confidence 4678899999999853 22334457999999999999999999996655432 22 334443 333332
Q ss_pred ecC-CC---CCCC-----HHHHHHHhhhC----CCc-EEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccc
Q 012104 161 VNS-ST---GYID-----YDKLEEKALDF----RPK-LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (471)
Q Consensus 161 v~~-~~---~~iD-----~~~le~~~~~~----~pk-lIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g 226 (471)
... +. +.|+ .+.+++.+.++ +|+ +|+++.+-+|...|++.|+++|+.++ |++|+||.+.+.+..
T Consensus 264 P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p 341 (714)
T PRK15400 264 PTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (714)
T ss_pred ccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCc
Confidence 111 11 2345 89999998753 232 55567888999999999999998877 789999987766655
Q ss_pred cCC--CCCC-Cc---c--EEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHH
Q 012104 227 EAA--NPFE-YC---H--IVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIG 297 (471)
Q Consensus 227 ~~~--~p~~-~a---D--iv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~ia 297 (471)
..+ +++. ++ | +++.|+||+|++.. +++|..+..+ + .++++.+..-...++|+...+|
T Consensus 342 ~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~v-------------d-~~~~n~a~~m~~STSPsY~l~A 407 (714)
T PRK15400 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDV-------------N-EETFNEAYMMHTTTSPHYGIVA 407 (714)
T ss_pred ccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCC-------------C-HHHHHHHHHHHcCCCcHHHHHH
Confidence 443 5553 55 5 99999999999975 4666554321 2 2455554333345789999999
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-C------ceEeeCC----------------------------CC
Q 012104 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G------YSLVTGG----------------------------TE 342 (471)
Q Consensus 298 a~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g------~~i~~~~----------------------------~~ 342 (471)
++.+|...+..+.-++..++.++.+..+++.|.+. + |.+.... .|
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 99988877754345678888888899999988765 4 5443210 02
Q ss_pred CeeEEEEccC---------CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 343 NHLVLWDLRP---------LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 343 ~~~~~v~~~~---------~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
.--+++.++. .|+++..+.+.|+++||.+.+.. ...+=+ +.+.|.++++++++.+.|.
T Consensus 488 P~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---------~~~iLf----l~s~g~t~~~~~~L~~aL~ 554 (714)
T PRK15400 488 PIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---------PYNLLF----LFSIGIDKTKALSLLRALT 554 (714)
T ss_pred CceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHHH
Confidence 2223444433 47788999999999999987642 122332 3455777899999999887
Q ss_pred HHHH
Q 012104 414 RAVT 417 (471)
Q Consensus 414 ~~l~ 417 (471)
+.-+
T Consensus 555 ~f~~ 558 (714)
T PRK15400 555 DFKR 558 (714)
T ss_pred HHHH
Confidence 7533
No 233
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=7.2e-18 Score=169.58 Aligned_cols=229 Identities=17% Similarity=0.202 Sum_probs=152.0
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|+++ .+.++||+.|+.+++ ++++|||+|++.++.|++..... . ..+...
T Consensus 50 ~~pt~~~le----~~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~--~---~~~~~~ 114 (366)
T PRK08247 50 GNPTRGVLE----QAIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLF--E---EHWKKW 114 (366)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHH--H---HHhhcc
Confidence 345566676 57889999976 366789999988765 68899999999999998743210 0 011123
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ + ..|++++++.+.+ ++|+|++. +||++...|+++|.++|+++|+++++|++|..++.
T Consensus 115 G--~~v~~v--d----~~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~----- 180 (366)
T PRK08247 115 N--VRFVYV--N----TASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL----- 180 (366)
T ss_pred C--ceEEEE--C----CCCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 3 344443 2 2489999998864 78988863 67888889999999999999999999999965432
Q ss_pred CCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC-CCCCCCCcHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~-~~~~g~p~~~~iaa~a~al 303 (471)
..|+. ++|+++.|++|++.|+ ++|+++++++ ++.+++..... .+...+| .. +. .++
T Consensus 181 ~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~--------------~l~~~~~~~~~~~g~~~s~--~~-a~--l~~ 241 (366)
T PRK08247 181 QRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ--------------ELCERLAYYQNAAGAVLSP--FD-SW--LLI 241 (366)
T ss_pred cCchhcCCcEEEeecceeccCCCceeeeEEecChH--------------HHHHHHHHHHHhcCCCCCh--HH-HH--HHH
Confidence 23444 6899999999999876 6799888643 44444432211 1111122 11 11 122
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceE-eeCCCCCeeEEEEc
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK-GYSL-VTGGTENHLVLWDL 350 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i-~~~~~~~~~~~v~~ 350 (471)
+.+. .+....++..+|++.+.+.|++. ++.. ..++.++ ++.+.+
T Consensus 242 ~~l~--tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg-~~sf~~ 287 (366)
T PRK08247 242 RGMK--TLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGG-MLSFRL 287 (366)
T ss_pred hccC--cHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCc-EEEEEE
Confidence 2222 34556667799999999999987 6653 3333344 333455
No 234
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=1.6e-17 Score=168.39 Aligned_cols=213 Identities=19% Similarity=0.225 Sum_probs=147.3
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|.+. .+.++||+.|+.+++.++++|||+|++.++.|++...... ..+...
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~-----~~~~~~ 127 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFT-----EFLPRM 127 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHH-----HHHhhC
Confidence 345556666 67889999865 4668899999999999999999999999999876421100 001122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ + ..|++++++++++ ++|+|++. .||+|...|+++|.++|+++|+++++|++|..++.
T Consensus 128 G--i~v~~v--d----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~----- 193 (398)
T PRK08249 128 G--VDVTLC--E----TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN----- 193 (398)
T ss_pred C--eEEEEc--C----CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----
Confidence 3 333333 2 3689999999864 78988863 78899999999999999999999999999975432
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|+. ++|++++|+||++.|+. ||+++.++ ++.+++..... ..|.......+++ +++
T Consensus 194 ~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~---------------~l~~~l~~~~~--~~g~~~s~~~a~l--~l~ 254 (398)
T PRK08249 194 QNPLALGADLVIHSATKFLSGHADALGGVVCGSK---------------ELMEQVYHYRE--INGATMDPMSAYL--ILR 254 (398)
T ss_pred CCchhhCCCEEeccCceecCCCCCceEEEEECCH---------------HHHHHHHHHHH--hcCCCCCHHHHHH--HHh
Confidence 22444 78999999999997753 57777655 45554433211 1122222222222 233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+. .+....++..+|++.+++.|++.
T Consensus 255 ~l~--tL~~R~~~~~~na~~la~~L~~~ 280 (398)
T PRK08249 255 GMK--TLKLRVRQQQESAMALAKYLQTH 280 (398)
T ss_pred Ccc--hHHHHHHHHHHHHHHHHHHHHcC
Confidence 322 45667788899999999999976
No 235
>PLN02590 probable tyrosine decarboxylase
Probab=99.80 E-value=4.8e-17 Score=168.74 Aligned_cols=318 Identities=17% Similarity=0.140 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCC----ceeeecCChHHHHHHHHHHh----cC-------CCCEEEEeCCCCCCcccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAV----LE-------PHDRIMGLDLPSGGHLTH 137 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~----~~~v~~~sGt~A~~~~~~al----l~-------pGD~Vl~~~~~~~g~~s~ 137 (471)
....++|+.+.+++++++|.+...| +--+++++||+||+.++.+. ++ |.=.|++.+. .|.|.
T Consensus 166 Pa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~Sv 242 (539)
T PLN02590 166 PAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSSF 242 (539)
T ss_pred chhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHHH
Confidence 3456899999999999999986311 11345678899998877653 11 1113333443 34332
Q ss_pred cccccCCccceecccee-EEEeeeecC-CCCCCCHHHHHHHhhhC-----CCcEEE--EcCCCCCccccHHHHHHHHHHh
Q 012104 138 GYYTSGGKKISATSIYF-ESLPYKVNS-STGYIDYDKLEEKALDF-----RPKLII--CGGSAYPRDWDYARFRAVADKC 208 (471)
Q Consensus 138 ~~~~~~g~~~~~~g~~~-~~~~~~v~~-~~~~iD~~~le~~~~~~-----~pklIi--~~~s~~g~~~d~~~i~~ia~~~ 208 (471)
. +.+...|.+. .++.+++|. +++.+|+++|++++.+. .|-+|+ ++.+.+|.+-|+++|+++|+++
T Consensus 243 ~------KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~ 316 (539)
T PLN02590 243 R------KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY 316 (539)
T ss_pred H------HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh
Confidence 1 2334555532 244455664 35799999999998642 366666 3577899999999999999999
Q ss_pred CCEEEEeccccchhhccccC---CCCCCCccEEEeCCCCcCCCCC-eEEEEeeCCC--C-CCCCCCCCCcccchHhh---
Q 012104 209 GALLLCDMAHISGLVAAQEA---ANPFEYCHIVTTTTHKSLRGPR-AGMIFYRKGP--K-PPKKGQPEGAVYDFEDK--- 278 (471)
Q Consensus 209 g~~livD~a~~~glv~~g~~---~~p~~~aDiv~~s~~K~l~Gpr-gG~i~~~~~~--~-~~~~~~~~i~~~~l~~~--- 278 (471)
|+|++||+|++..+...... ...++.+|.++.++|||+..|. +|++++++.. . ...... ++...
T Consensus 317 g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~------~YL~~~~~ 390 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNP------EYLEFKVS 390 (539)
T ss_pred CCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCH------HHhCCccc
Confidence 99999999997332222211 1234578999999999987775 4888887641 0 000000 01100
Q ss_pred -----hhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccC
Q 012104 279 -----INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRP 352 (471)
Q Consensus 279 -----i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~ 352 (471)
.+.. ..+.+.+-. .....+..+++.+..++|.+++++..+++++|.+.|++. +|+++..+ ...++++.+.+
T Consensus 391 ~~~~~~d~~-d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~-~l~iVcFr~~~ 467 (539)
T PLN02590 391 KKDTVVNYK-DWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR-YFSLVCFRLAP 467 (539)
T ss_pred ccccCCCcc-ccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceEEEEEEecC
Confidence 0000 001222222 233455667887777899999999999999999999886 79997643 34456666655
Q ss_pred CCCCH---H----HHHHHHhhcCe-EeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 353 LGLTG---N----KVEKLCDLCNI-TVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 353 ~~~~~---~----~~~~~L~~~gI-~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+.+. . ++.+.|.+.|. .+++..+.+ ...||+.+... -.+++|++.+.+.|.+...
T Consensus 468 ~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g------~~~lR~~i~n~---~T~~~dv~~~~~~i~~~a~ 531 (539)
T PLN02590 468 VDGDEDQCNERNRELLAAVNSTGKIFISHTALSG------KFVLRFAVGAP---LTEEKHVTEAWQIIQKHAS 531 (539)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECC------EEEEEEEecCC---CCCHHHHHHHHHHHHHHHH
Confidence 33221 1 23444444444 444332222 34899987322 2458999999999877643
No 236
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=8.2e-18 Score=171.70 Aligned_cols=193 Identities=17% Similarity=0.105 Sum_probs=133.2
Q ss_pred eEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 35 ELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 35 ~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
.+..+..|..+.+.+++... ... ..++.-.|+ ++...+.+| +++++++|++. .|.++||+.|+.+++
T Consensus 35 Pi~~sstf~~~~~~~~~~~~-~~~-~~~~~Y~r~--~~pt~~~le----~~la~l~g~~~-----~v~fsSG~~Ai~~al 101 (437)
T PRK05613 35 PIYQTTSYVFDSAEHAKQRF-ALE-DLGPIYSRL--TNPTVEALE----NRIASLEGGVH-----AVAFASGQAAETAAI 101 (437)
T ss_pred CEeCCCCcccCCHHHHHHhh-ccc-cCCceeeCc--cChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHH
Confidence 34455566655555554321 111 123322333 345556665 67889999864 477899999999999
Q ss_pred HHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCC
Q 012104 115 TAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAY 192 (471)
Q Consensus 115 ~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~ 192 (471)
.++++|||+|++++..|++...... ..+...| +++..++ ++ .|++++++.+.+ ++|+|++. .|++
T Consensus 102 ~~ll~~Gd~VI~~~~~y~~t~~~~~-----~~l~~~G--i~v~~vd-~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~ 168 (437)
T PRK05613 102 LNLAGAGDHIVTSPRLYGGTETLFL-----VTLNRLG--IEVTFVE-NP----DDPESWQAAVQP-NTKAFFGETFANPQ 168 (437)
T ss_pred HHhcCCCCEEEECCCccHHHHHHHH-----HHHHhcC--eEEEEEC-CC----CCHHHHHHhCCc-cCeEEEEECCCCCC
Confidence 9999999999999988887632100 0111223 4544443 21 289999998874 68888764 5778
Q ss_pred CccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeC
Q 012104 193 PRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (471)
Q Consensus 193 g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~ 258 (471)
+.+.|+++|+++|+++|+++++|++|+.|.. ..|++ ++|++++|+||++.|+. ||+++.+.
T Consensus 169 ~~v~di~~I~~la~~~gi~livD~t~a~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 169 ADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred CcccCHHHHHHHHHHcCCeEEEECCCccccc-----cChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 8999999999999999999999999976542 34555 89999999999987753 57777543
No 237
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.3e-17 Score=167.87 Aligned_cols=210 Identities=16% Similarity=0.133 Sum_probs=143.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.....+| ++++++.|.+. + +.+.||+.|+.+++.++++|||+|++.++.|++....- . ..+...|
T Consensus 61 pt~~~Le----~~iA~le~~~~----~-~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~--~---~~l~~~G- 125 (394)
T PRK09028 61 PTHFAFQ----AAIVELEGGAG----T-ALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC--D---KILKGFG- 125 (394)
T ss_pred chHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H---Hhhhhcc-
Confidence 3445565 56777777653 3 55789999999999999999999999999987653210 0 0111122
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
.++..+ ++ -|.+.+++.+. .++|+|+++ .||++...|+++|+++|+++|+++++|++|++++ ...
T Consensus 126 -i~v~~v--~~----~~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~-----~~~ 192 (394)
T PRK09028 126 -IETTYY--DP----MIGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPI-----NSR 192 (394)
T ss_pred -eEEEEE--CC----CCHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccc-----cCC
Confidence 233333 21 25678888876 478999876 6889999999999999999999999999998653 235
Q ss_pred CCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-CCCCCCCCCcHHHHHHHHHHHHH
Q 012104 231 PFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIGALAVALKQ 305 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-~~~~~~g~p~~~~iaa~a~al~~ 305 (471)
|++ ++|+++.|.|||+.|+. +|+++.++ ++.+++... ...|...+| . .+. ..++-
T Consensus 193 Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~---------------~~~~~l~~~~~~~G~~~~p--~--~a~-l~~rg 252 (394)
T PRK09028 193 PFEMGVDISIQAATKYIVGHSDVMLGTATANE---------------KHWDQLREHSYLMGQCTSP--D--DVY-LAMRG 252 (394)
T ss_pred ccccCceEEEEeCCeEecCCCCEEEEEEECCH---------------HHHHHHHHHHHhcCCCCCH--H--HHH-HHHcc
Confidence 667 79999999999999984 57665444 344434321 111211111 1 122 22333
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 306 ASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 306 ~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+. -+.-+.++..+|+..+++.|+++
T Consensus 253 l~--TL~lR~~~~~~na~~la~~L~~~ 277 (394)
T PRK09028 253 LR--TLGVRLAQHEKNALKVANWLATR 277 (394)
T ss_pred cC--cHHHHHHHHHHHHHHHHHHHhcC
Confidence 33 35677888999999999999987
No 238
>PRK08354 putative aminotransferase; Provisional
Probab=99.80 E-value=7.2e-17 Score=158.96 Aligned_cols=292 Identities=17% Similarity=0.105 Sum_probs=172.0
Q ss_pred CCeeEecCCCCC-cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH-HH
Q 012104 32 RGIELIASENFT-SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PA 109 (471)
Q Consensus 32 ~~i~li~s~n~~-s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A 109 (471)
+.|+|..++|.. ++.+.+++...+.. . .+||. ...+ ++.+++.+|. +|..++|+ +|
T Consensus 9 ~~i~l~~~~np~~p~~~~~a~~~~~~~-~-~~yp~---------~~~l----~~~ia~~~~~-------~I~vt~G~~~a 66 (311)
T PRK08354 9 GLIDFSASVNPYPPEWLDEMFERAKEI-S-GRYTY---------YEWL----EEEFSKLFGE-------PIVITAGITEA 66 (311)
T ss_pred ceeEecCCCCCCCCHHHHHHHHHHHHH-h-hcCCC---------hHHH----HHHHHHHHCC-------CEEECCCHHHH
Confidence 467888887765 67788888655432 1 23442 1223 3566777773 34455665 68
Q ss_pred HHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE-EEc
Q 012104 110 NFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI-ICG 188 (471)
Q Consensus 110 ~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI-i~~ 188 (471)
+..++. ++.|||+|++.+|+|+++.. .+...|. +++.+ .+|++.+++.+. +++++ +++
T Consensus 67 l~~~~~-~~~~gd~vlv~~P~y~~~~~---------~~~~~g~--~~~~~-------~~d~~~l~~~~~--~~~~vi~~~ 125 (311)
T PRK08354 67 LYLIGI-LALRDRKVIIPRHTYGEYER---------VARFFAA--RIIKG-------PNDPEKLEELVE--RNSVVFFCN 125 (311)
T ss_pred HHHHHH-hhCCCCeEEEeCCCcHHHHH---------HHHHcCC--EEeec-------CCCHHHHHHhhc--CCCEEEEec
Confidence 777664 44599999999999987642 1223332 33332 368899988875 34544 456
Q ss_pred -CCCCCccccHHHH---HHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCc--CCCCCeEEEEeeCCCCC
Q 012104 189 -GSAYPRDWDYARF---RAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKS--LRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 189 -~s~~g~~~d~~~i---~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~--l~GprgG~i~~~~~~~~ 262 (471)
+||+|..++.+++ .++|+++|+++|+|++|. ++...+..++ ..--+++.|++|+ ++|.|.||+++..
T Consensus 126 P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~-~f~~~~~~~~--~~~vi~~~S~SK~~~l~GlRiG~~v~~~---- 198 (311)
T PRK08354 126 PNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFI-DFVKKPESPE--GENIIKLRTFTKSYGLPGIRVGYVKGFE---- 198 (311)
T ss_pred CCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcch-hccccccccC--CCcEEEEeccHhhcCCccceeeeeeehH----
Confidence 7899999987655 566788999999999996 6655432111 1123888999999 5899999998722
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCC
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTE 342 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~ 342 (471)
+. +.....+... ...+.++. .++..-....+.+..+.+.+..+.+.+.+ . ..+..
T Consensus 199 -----------~~---l~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l------~-~~~~~ 253 (311)
T PRK08354 199 -----------EA---FRSVRMPWSI---GSTGYAFL-EFLIEDDFEHLRKTMPLIWREKERFEKAL------Y-VKSDA 253 (311)
T ss_pred -----------HH---HHHcCCCccC---CHHHHHHH-HHHHHhHHHHHHHHHHHHHHHHHHHHHhc------C-CCCCC
Confidence 22 2222222211 11222222 22221000111222222222222222221 1 12333
Q ss_pred CeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 343 NHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 343 ~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+ ++++++. +..++.+.|.++||.+.++..++. ++++||++. ..++.+++.+.++++
T Consensus 254 ~-~~~~~~~----~~~~~~~~l~~~gv~v~~g~~f~~-----~~~iRi~~~-------~~~~~~~l~~al~~~ 309 (311)
T PRK08354 254 N-FFIKDVG----DAEKFVEFLKRNGILVRDCTSFGL-----PGYIRFSVR-------DREENEKLIRALREW 309 (311)
T ss_pred c-EEEEECC----CHHHHHHHHHHCCeEEEecccCCC-----CCeEEEEeC-------CHHHHHHHHHHHHHh
Confidence 4 4456653 456788888999999998865541 479999983 256788888888764
No 239
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.79 E-value=2.2e-17 Score=174.15 Aligned_cols=292 Identities=15% Similarity=0.050 Sum_probs=196.2
Q ss_pred HHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee
Q 012104 81 LCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK 160 (471)
Q Consensus 81 ~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~ 160 (471)
.+++.++++||++... ..+++.|.+|.++++++++|||+|++...+|-+.+ |+ +.++|. .++++.
T Consensus 199 eAe~~aA~~fgAd~ty----fvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~-~a--------Lilsga--~PVYl~ 263 (713)
T PRK15399 199 EAEEYIARTFGAEQSY----IVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA-HL--------LMMSDV--VPIWLK 263 (713)
T ss_pred HHHHHHHHHhCCCcEE----EEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH-HH--------HHHcCC--eeEEec
Confidence 4678899999999853 22334457999999999999999999996665433 22 234443 333332
Q ss_pred ec-CCC---CCCCH-----HHHHHHhhhC----CCcEE-EEcCCCCCccccHHHHHHHHHHhCCEE-EEeccccchhhcc
Q 012104 161 VN-SST---GYIDY-----DKLEEKALDF----RPKLI-ICGGSAYPRDWDYARFRAVADKCGALL-LCDMAHISGLVAA 225 (471)
Q Consensus 161 v~-~~~---~~iD~-----~~le~~~~~~----~pklI-i~~~s~~g~~~d~~~i~~ia~~~g~~l-ivD~a~~~glv~~ 225 (471)
.. .+. +.|+. +.++++++++ +|+.+ +++.+.+|...|+++|.++| |+.+ ++|+||++.+.+.
T Consensus 264 P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~ 340 (713)
T PRK15399 264 PTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFH 340 (713)
T ss_pred ccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcC
Confidence 11 111 34555 9999998753 34444 45678889999999999988 6766 6999998766554
Q ss_pred ccCC--CCCC---CccEE---EeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHH
Q 012104 226 QEAA--NPFE---YCHIV---TTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 226 g~~~--~p~~---~aDiv---~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~i 296 (471)
...+ +++. ++|.+ +-|+||+|++.. +++|..+..+ + .++++.+..-...++|+...+
T Consensus 341 p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~v-------------d-~~~~n~a~~m~~STSPsY~Lm 406 (713)
T PRK15399 341 PIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEY-------------D-EETFNEAFMMHTSTSPSYPIV 406 (713)
T ss_pred cccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCC-------------C-HHHHHHHHHHHcCCCcHHHHH
Confidence 4332 4442 47866 999999999985 5777665421 2 345555533334578999999
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-C------ceEeeC----------------------------CC
Q 012104 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G------YSLVTG----------------------------GT 341 (471)
Q Consensus 297 aa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g------~~i~~~----------------------------~~ 341 (471)
|++.+|...+..+.-++..+..++.+..+++.|.+. + |++... ..
T Consensus 407 ASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~l 486 (713)
T PRK15399 407 ASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFL 486 (713)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccC
Confidence 999988877754345677788888888889888765 3 344311 00
Q ss_pred CCeeEEEEcc---------CCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 342 ENHLVLWDLR---------PLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 342 ~~~~~~v~~~---------~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
|.--+++.++ ..|+++..+.+.|+++||.+.+.. ...+=+ +.+.|.++++++++.+.|
T Consensus 487 DP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---------~~~vL~----l~s~g~t~~~~~~L~~aL 553 (713)
T PRK15399 487 DPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---------PYNLLF----LFSIGIDKTKAMGLLRGL 553 (713)
T ss_pred CCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---------CCeEEE----EeCCCCCHHHHHHHHHHH
Confidence 2222344443 347899999999999999997642 122222 345577789999999988
Q ss_pred HHHHH
Q 012104 413 HRAVT 417 (471)
Q Consensus 413 ~~~l~ 417 (471)
.+.-+
T Consensus 554 ~~f~~ 558 (713)
T PRK15399 554 TEFKR 558 (713)
T ss_pred HHHHH
Confidence 77633
No 240
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=1.4e-17 Score=167.24 Aligned_cols=244 Identities=14% Similarity=0.121 Sum_probs=159.9
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++..++.+| ++++++.|.++ .|.++||+.|+.+++.++++|||+|+++...|++.+.... ..+...
T Consensus 62 ~~P~~~~lE----~~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~-----~~~~~~ 127 (384)
T PRK06434 62 GNPTVQAFE----EKYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFN-----KVLKTL 127 (384)
T ss_pred CChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHH-----HHHHhc
Confidence 567788888 56888999876 3778999999999999999999999998887877653110 011122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.+++++. ..++ +...++|+|++. .|+++...|+++|+++|+++| +++|.+++++. .
T Consensus 128 G--i~v~fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~-----~ 190 (384)
T PRK06434 128 G--IHVDYIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY-----N 190 (384)
T ss_pred C--cEEEEECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc-----c
Confidence 3 45555554421 1122 222368998876 568889999999999999998 56799985442 3
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|++ ++|++++|.||++.|+. ||+++++++ ++.+++..... ..|......-|++ .++
T Consensus 191 ~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~--------------~~~~~~~~~~~--~~G~~~~~~~A~l--~~~ 252 (384)
T PRK06434 191 QNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK--------------SIFNNLVERRK--TLGSNPDPIQAYL--ALR 252 (384)
T ss_pred CCchhcCCCEEEeecccccCCCCCceEEEEecCcH--------------HHHHHHHHHHH--hcCCCCCHHHHHH--HHh
Confidence 34666 79999999999998865 788888664 45555442210 1122212222222 344
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcCC-c-eEeeCC---------CCCeeEEEEccCCCCCHHHHHHHHhhcCe
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGKG-Y-SLVTGG---------TENHLVLWDLRPLGLTGNKVEKLCDLCNI 369 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~g-~-~i~~~~---------~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 369 (471)
.+. .+..+.++..+|+..+++.|++.. + +|..++ ..+.++.+++. + .+++.++++...+
T Consensus 253 gL~--tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~--~--~~~~~~f~~~l~l 322 (384)
T PRK06434 253 GLK--TLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR--S--MEDVHKFIRNLEI 322 (384)
T ss_pred CCC--cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC--C--HHHHHHHHHhCCc
Confidence 443 467888899999999999999863 3 233322 12335566664 2 3445555555543
No 241
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.79 E-value=3.4e-17 Score=163.07 Aligned_cols=264 Identities=18% Similarity=0.172 Sum_probs=171.3
Q ss_pred HHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
++.+++.+|.+.. -+|..++|+ +++.++ ..+++||| |++.+|+|+++.. .+...| .+++.++.
T Consensus 59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~l-~~~~~~g~-v~v~~P~y~~y~~---------~~~~~g--~~~~~v~~ 122 (339)
T PRK06959 59 AACAARYYGAPDA---AHVLPVAGSQAAIRAL-PALLPRGR-VGIAPLAYSEYAP---------AFARHG--HRVVPLDE 122 (339)
T ss_pred HHHHHHHhCCCCc---ccEEECcCHHHHHHHH-HHhcCCCe-EEEcCCCcHHHHH---------HHHHCC--CEEEeecc
Confidence 3567889998642 146667776 466654 45678887 8889999887642 122334 34445443
Q ss_pred cCCCCCCCHHHHHHHhhhCCCc-EEEEc-CCCCCccccHHHHHHHH---HHhCCEEEEeccccchhhccccCCCC--C-C
Q 012104 162 NSSTGYIDYDKLEEKALDFRPK-LIICG-GSAYPRDWDYARFRAVA---DKCGALLLCDMAHISGLVAAQEAANP--F-E 233 (471)
Q Consensus 162 ~~~~~~iD~~~le~~~~~~~pk-lIi~~-~s~~g~~~d~~~i~~ia---~~~g~~livD~a~~~glv~~g~~~~p--~-~ 233 (471)
+. +.+.+ ..+ +++|+ +||+|..++.+++.+++ ++++.++|+|++|. .+... ++. + +
T Consensus 123 ~~-------~~~~~-----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~---~s~~~~~~ 186 (339)
T PRK06959 123 AA-------DTLPA-----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPA---ASLAAHTD 186 (339)
T ss_pred cc-------hhccc-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCc---ccchhccC
Confidence 31 22221 234 45566 78999999988887764 56799999999987 44321 111 1 1
Q ss_pred Ccc-EEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 234 YCH-IVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 234 ~aD-iv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
+.+ +++.|++|. ++|.|.||+++++ ++.+.+.+...+... +....++...++.. ...
T Consensus 187 ~~~vi~l~SfSK~~gl~GlRiGy~v~~~---------------~li~~l~~~~~~~~v---s~~~q~a~~~~L~~--~~~ 246 (339)
T PRK06959 187 RPGLVVLRSVGKFFGLAGVRAGFVLAAP---------------ALLAALRDALGAWTV---SGPARHAVRAAFAD--AAW 246 (339)
T ss_pred CCCEEEEecChhhcCCcchheEEEecCH---------------HHHHHHHHhcCCCCC---cHHHHHHHHHHhCc--HHH
Confidence 212 889999998 5899999999986 566666654433221 12222333334432 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEE
Q 012104 311 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRI 390 (471)
Q Consensus 311 ~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRi 390 (471)
.++..+++.++.+.+.+.|++.|+++.. ...++|+++. +..++.+.|.++||.|+.- + ..+++||
T Consensus 247 ~~~~~~~~~~~r~~l~~~L~~~g~~~~~---~~~f~~~~~~----~~~~l~~~l~~~GI~vr~~---~-----~~~~lRi 311 (339)
T PRK06959 247 QAAMRERLAADGARLAALLRAHGFAVHA---TPLFSWTDDP----RAAALHAALARRGIWTRYF---A-----PPPSVRF 311 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCccC---cceEEEEeCC----CHHHHHHHHHhCCeEEEEC---C-----CCCeEEE
Confidence 3566777788889999999998987742 2456788763 4567888899999999631 1 1358999
Q ss_pred ecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 391 GTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 391 g~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
++. -+.++++++.+.|++++...
T Consensus 312 si~------~~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 312 GLP------ADEAEWQRLEDALAECVPTL 334 (339)
T ss_pred ECC------CCHHHHHHHHHHHHHHHHHH
Confidence 962 12579999999998876643
No 242
>PRK05939 hypothetical protein; Provisional
Probab=99.79 E-value=3.4e-17 Score=165.82 Aligned_cols=150 Identities=15% Similarity=0.124 Sum_probs=117.0
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ++++++.|.++ .+.++||+.|+.+++.++++|||+|++.++.|++|.... ..+...
T Consensus 45 g~p~~~~lE----~~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~------~~l~~~ 109 (397)
T PRK05939 45 GTPTTAALE----AKITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLF------GTLRGL 109 (397)
T ss_pred CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHH------HHHHhc
Confidence 567777787 57888999876 366789999999999999999999999999988764311 011123
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.+++ .|++++++++. .++|+|++. +||+|.+.|+++|+++|+++|+++++|++|.++..
T Consensus 110 G--~~v~~v~~------~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----- 175 (397)
T PRK05939 110 G--VEVTMVDA------TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----- 175 (397)
T ss_pred C--CEEEEECC------CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-----
Confidence 3 34444432 48999999886 478988865 68899999999999999999999999999976532
Q ss_pred CCCCC-CccEEEeCCCCcCCCC
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGP 249 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gp 249 (471)
..|.. ++|+++.|+||++.|+
T Consensus 176 ~~~~~~gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 176 FRPKDVGASLVINSLSKYIAGH 197 (397)
T ss_pred cCccccCCEEEEecCeecccCC
Confidence 23444 7999999999998775
No 243
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.79 E-value=3.4e-17 Score=167.12 Aligned_cols=300 Identities=19% Similarity=0.174 Sum_probs=198.8
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-
Q 012104 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV- 117 (471)
Q Consensus 39 s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al- 117 (471)
++..+++.+.+++.+.++..- +.++ .| ....++|+.+..+++++++++...+ -+.+++||+||+.++.+.
T Consensus 70 ~~~~~~~~a~~~~~~~~~~nl--~d~~--~~---p~a~~~E~~~v~~l~~l~~~~~~~~--G~~t~GgTean~lal~aar 140 (460)
T COG0076 70 CPTRVPPVAAELLVSALNKNL--GDPD--ES---PAAAELEERVVNMLSDLLGAPEEAS--GTFTSGGTEANLLALLAAR 140 (460)
T ss_pred CCCCCHHHHHHHHHHHHhhcC--CCcc--cC---hhHHHHHHHHHHHHHHHhCCCCCCc--eEEEcChHHHHHHHHHHHH
Confidence 345566777778777765443 2222 11 2345889999999999999964433 455778899999777653
Q ss_pred --cC--C---CC------EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCc-
Q 012104 118 --LE--P---HD------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPK- 183 (471)
Q Consensus 118 --l~--p---GD------~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pk- 183 (471)
.. . +. +|+++. .+|+|.- +.+...|.+.+.++. ++.+..+|+++|++++.+....
T Consensus 141 ~~~~~~~~~~~~~~~~~P~ii~s~---~aH~s~~------Kaa~~lG~~~~~v~~--~~~~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 141 ERWRKRALAESGKPGGKPNIVCSE---TAHFSFE------KAARYLGLGLRRVPT--VPTDYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred HHHHHHhhhcccccCCCCeEEecC---cchhHHH------HHHHHhCCCceeEEe--ccCccccCHHHHHHHHHhhccCc
Confidence 11 1 11 577666 3444421 334556766655544 4336899999999999876555
Q ss_pred -EEE-EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-ccC--C--CCCCCccEEEeCCCCcCCCCCe-EEEE
Q 012104 184 -LII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QEA--A--NPFEYCHIVTTTTHKSLRGPRA-GMIF 255 (471)
Q Consensus 184 -lIi-~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~~--~--~p~~~aDiv~~s~~K~l~Gprg-G~i~ 255 (471)
+|- ++.+++|.+-|+++|++||+++|+|++||+|.+ |++.. ... . .-++++|.++.++||++..|.+ |+++
T Consensus 210 ~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~G-G~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il 288 (460)
T COG0076 210 VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFG-GFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVL 288 (460)
T ss_pred eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEcccc-ceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEE
Confidence 443 568899999999999999999999999999987 65442 111 1 2234789999999999777765 9999
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhh--hcCCCC-------CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKIN--FAVFPS-------LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALG 326 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~--~~~~~~-------~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~ 326 (471)
.+++. .+.+.+. ....++ ..++..-...++....++.+..++|++..++..+++++|+
T Consensus 289 ~rd~e-------------~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la 355 (460)
T COG0076 289 FRDEE-------------ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLA 355 (460)
T ss_pred EECHH-------------HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHH
Confidence 98851 1222111 111111 1122233355566667888777899999999999999999
Q ss_pred HHHHcCC-ceEeeCCCCCeeEEEEccCCCCC-HHHHHHHHhhcCeEeccC
Q 012104 327 NYLTGKG-YSLVTGGTENHLVLWDLRPLGLT-GNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 327 ~~L~~~g-~~i~~~~~~~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~~ 374 (471)
+.|++.| |+++..+ ....+.+.+.+ ..+ ..+....+++.|..+...
T Consensus 356 ~~l~~~~~~e~~~~p-~l~~V~fr~~~-~~~~~~~~~~~~~~~gw~v~~~ 403 (460)
T COG0076 356 EELEKLGDFELVNEP-ELPIVAFRLKD-DEDTLADLSERLDRRGWQVPAQ 403 (460)
T ss_pred HHHHhCCCcEeecCC-ccceEEEEcCC-cccchhchHHHHHhcCceeecc
Confidence 9999986 9997654 23345555532 122 344566677778877653
No 244
>PRK06460 hypothetical protein; Provisional
Probab=99.79 E-value=5.9e-17 Score=163.34 Aligned_cols=211 Identities=17% Similarity=0.179 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
...+.+| +++++++|++. .+.++||+.|+..++.++++|||+|++..+.|++.+.. + . ..+...|.
T Consensus 45 p~~~~L~----~~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~-~-~---~~~~~~G~ 110 (376)
T PRK06460 45 PTVLELT----KKIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRF-F-T---DYLKNWGV 110 (376)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHH-H-H---HHHHhhCc
Confidence 4445555 67889999875 35568999999999999999999999998777643321 0 0 01122343
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
++..++.+ |.+.+++.+ ..++|+|++. +||+|..+|+++|+++|+++|+++++|++|..+. ...
T Consensus 111 --~v~~~~~~------~~~~l~~~~-~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~-----~~~ 176 (376)
T PRK06460 111 --NVDASNPG------SDNIIEKAK-SKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPI-----NQK 176 (376)
T ss_pred --EEEEECCC------CHHHHHHhc-CCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccc-----cCC
Confidence 33333222 234455544 3578888754 7899999999999999999999999999987432 112
Q ss_pred CCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHh
Q 012104 231 PFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQA 306 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~ 306 (471)
++. ++|+++.|+||++.|++ +|++++++ ++.+++.....+.. .++.. ..+. .+++.
T Consensus 177 ~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~---------------~l~~~l~~~~~~~g-~~~~~--~~a~-~~l~~- 236 (376)
T PRK06460 177 PLELGADIVVHSASKFLAGHNDVIAGLAAGYG---------------KLLNVIDQMRRTLG-TSLDP--HAAY-LTLRG- 236 (376)
T ss_pred hhhcCCCEEEeecceeccCCCCceEEEEecCH---------------HHHHHHHHHHHhcC-CCCCH--HHHH-HHHhc-
Confidence 333 68999999999998865 79988776 45555543222211 11121 1222 22322
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 307 STPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 307 ~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+.++...+++.+|++.+++.|++.
T Consensus 237 -~~~l~~r~~~~~~n~~~l~~~L~~~ 261 (376)
T PRK06460 237 -IKTLKIRMDVINRNAEQIAEFLEGH 261 (376)
T ss_pred -hhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 2356778889999999999999976
No 245
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.79 E-value=7.3e-17 Score=163.43 Aligned_cols=324 Identities=18% Similarity=0.162 Sum_probs=191.5
Q ss_pred CCeeEecC--CCC---CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIAS--ENF---TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s--~n~---~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
..|++..+ .|+ .+|.|.+++.+.+.+.- ....+| . .+...++| +++++++|.+. .+.+.||
T Consensus 28 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~---~~~~~~-~-~~~~~~l~----~~la~~~g~~~-----~~~~~sg 93 (379)
T TIGR00707 28 EYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLV---HVSNLY-Y-TEPQEELA----EKLVEHSGADR-----VFFCNSG 93 (379)
T ss_pred EEEEcCcchhhccCCCCCHHHHHHHHHHHhhcc---cccccc-C-CHHHHHHH----HHHHhhCCCCE-----EEEeCCc
Confidence 34666553 343 35899998877664321 112222 2 23333444 67888999764 3556789
Q ss_pred HHHHHHHHHHh---cC----CCCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCC---CCCCHHHHHH
Q 012104 107 SPANFAAYTAV---LE----PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSST---GYIDYDKLEE 175 (471)
Q Consensus 107 t~A~~~~~~al---l~----pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~---~~iD~~~le~ 175 (471)
++|+.+++.++ .. +||+|+++++.|.|+..... ...+.. +.....++..+. ...|++++++
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 165 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGAL--------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKK 165 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHH--------HhcCChhhhccCCCCCCCceeeCCCCHHHHHH
Confidence 99999888765 22 48999999988866532110 011100 000001111110 1128999999
Q ss_pred HhhhCCCcEEEEc--CCCCCcc-c---cHHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcC
Q 012104 176 KALDFRPKLIICG--GSAYPRD-W---DYARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSL 246 (471)
Q Consensus 176 ~~~~~~pklIi~~--~s~~g~~-~---d~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l 246 (471)
.+.. ++++|+++ ++++|.. . ++++|.++|+++|+++++|++|. |+...|.. + .... ..|++ |++|++
T Consensus 166 ~~~~-~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~sK~~ 241 (379)
T TIGR00707 166 AIDD-ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TLAKGL 241 (379)
T ss_pred Hhhh-CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EEcccc
Confidence 8864 68888765 3344432 2 36888999999999999999996 66443321 1 1112 34665 468996
Q ss_pred -CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 012104 247 -RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (471)
Q Consensus 247 -~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l 325 (471)
+|.|.|++++++ ++.+.+.........+. +...+++...+++.+.. .++.++..++.+.+
T Consensus 242 ~~G~riG~~~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~ 302 (379)
T TIGR00707 242 GGGVPIGATLAKE---------------EVAEAFTPGDHGSTFGG-NPLACAAALAVLEVIEK---ERLLENVKEKGDYF 302 (379)
T ss_pred cCCcccEEEEEcH---------------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHH
Confidence 456889999876 44444443211122232 33344444456665432 24556667777777
Q ss_pred HHHHHcCCceEe--eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHH
Q 012104 326 GNYLTGKGYSLV--TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEK 403 (471)
Q Consensus 326 ~~~L~~~g~~i~--~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~ 403 (471)
++.|++.+.... .....+.++++.+.+ +..++.+.|.+.||.+.+. ..+.+||+++... +++
T Consensus 303 ~~~l~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~v~~~---------~~~~lRi~~~~~~----t~~ 366 (379)
T TIGR00707 303 KERLEELGKNYPNKEVRGKGLMLGIELEA---PCKDIVKKALEKGLLVNCA---------GPKVLRFLPPLII----TKE 366 (379)
T ss_pred HHHHHHHHhhCCCCccccCceEEEEEecC---cHHHHHHHHHHCCcEEeeC---------CCCEEEEECCCcC----CHH
Confidence 777766433221 011234466777643 3577888899999999752 1368999975433 378
Q ss_pred HHHHHHHHHHHHH
Q 012104 404 DFEQIGEFLHRAV 416 (471)
Q Consensus 404 d~~~l~~~i~~~l 416 (471)
+++++.+.|++++
T Consensus 367 ~i~~~~~~l~~~~ 379 (379)
T TIGR00707 367 EIDEAVSALEEAI 379 (379)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999987653
No 246
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.79 E-value=2.5e-17 Score=166.03 Aligned_cols=219 Identities=18% Similarity=0.155 Sum_probs=145.8
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccc
Q 012104 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (471)
Q Consensus 62 g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 141 (471)
||.-.|+ ++...+.+| ++++++.|.+. .+.++||+.|+.+++ ++++|||+|++.++.|++.+....
T Consensus 41 ~~~y~r~--~~p~~~~Le----~~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~~-- 106 (380)
T PRK06176 41 GYEYSRS--GNPTRFALE----ELIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLFD-- 106 (380)
T ss_pred CCcccCC--CChhHHHHH----HHHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHHH--
Confidence 3444443 345566776 57888999876 366789999998766 578999999999998876542100
Q ss_pred cCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 142 ~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
.. ....++++..+ + ..|++++++.+.. ++++|++. .||+|...|+++|.++|+++|+++++|++|+
T Consensus 107 ----~~-~~~~gi~v~~v--d----~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a 174 (380)
T PRK06176 107 ----KV-LVKNGLSCTII--D----TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFA 174 (380)
T ss_pred ----HH-HHhcCeEEEEc--C----CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcc
Confidence 00 11122333333 2 2489999998864 78988863 6789999999999999999999999999997
Q ss_pred chhhccccCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC-CCCCCCCcHH
Q 012104 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF-PSLQGGPHNH 294 (471)
Q Consensus 220 ~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~-~~~~g~p~~~ 294 (471)
.+.. ..|+. ++|++++|+||++.||. ||+++++++ ++.+++..... .+..-+|.
T Consensus 175 ~~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~--------------~~~~~~~~~~~~~G~~~~~~-- 233 (380)
T PRK06176 175 TPYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE--------------ALAQEIAFFQNAIGGVLGPQ-- 233 (380)
T ss_pred cccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH--------------HHHHHHHHHHHHhcCCCCHH--
Confidence 5421 23455 79999999999998874 788887653 44444432111 11111111
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 295 QIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 295 ~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
. +.+ .++.+. .+..+.++..+|+..+++.|+++
T Consensus 234 ~-~~l--~~~gl~--tl~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 234 D-SWL--LQRGIK--TLGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred H-HHH--HHhccC--cHHHHHHHHHHHHHHHHHHHHhC
Confidence 1 111 122221 34566777788999999999876
No 247
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.1e-17 Score=151.06 Aligned_cols=317 Identities=22% Similarity=0.252 Sum_probs=211.9
Q ss_pred CeeEecCCCC--CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH
Q 012104 33 GIELIASENF--TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN 110 (471)
Q Consensus 33 ~i~li~s~n~--~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~ 110 (471)
+..|- |+++ .+.+.+++|.... .|...||......++| ++.+++||-+. .++.+|||.+|
T Consensus 23 ~vDLR-SDTvT~PTdeMr~am~eA~--------vgDdVyGeD~tt~rLE----~~vA~l~GKEA-----gLFv~SGTmgN 84 (384)
T KOG1368|consen 23 SVDLR-SDTVTVPTDEMRRAMAEAS--------VGDDVYGEDPTTNRLE----QRVAELFGKEA-----GLFVPSGTMGN 84 (384)
T ss_pred ccccc-cccccCChHHHHHHHhhcc--------cCcccccCCccHHHHH----HHHHHHhCccc-----eeeeccccccc
Confidence 34444 4444 3567888886543 2334555556667788 57889999885 46678999999
Q ss_pred HHHHHHhc-CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCC-------C
Q 012104 111 FAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR-------P 182 (471)
Q Consensus 111 ~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~-------p 182 (471)
+++++.-+ +||.+|++-+..| + |.| ++|....+.|... .++. +++++.+|++++|+.+...+ +
T Consensus 85 llaIm~Hc~~rg~eii~gd~~H---I-~~~--E~gg~s~l~gv~~--~tv~-~e~dgtm~ledIe~~ir~~~GD~H~p~T 155 (384)
T KOG1368|consen 85 LLAIMVHCHQRGSEIIVGDRAH---I-HRY--EQGGISQLAGVHV--RTVK-NENDGTMDLEDIEAAIRVPKGDCHMPPT 155 (384)
T ss_pred HHHHHHHhcCCCceEEeccchh---e-eeh--hccChhhhcccee--Eeee-eCCCCeeeHHHHHHhhcCCCCCccCCCc
Confidence 99988876 5999999887554 2 221 2222223445433 3333 33678999999999997433 4
Q ss_pred cEEEEc--CCCC-CccccHHHH---HHHHHHhCCEEEEeccccchh-hccccCCCCCC----CccEEEeCCCCcCCCCCe
Q 012104 183 KLIICG--GSAY-PRDWDYARF---RAVADKCGALLLCDMAHISGL-VAAQEAANPFE----YCHIVTTTTHKSLRGPRA 251 (471)
Q Consensus 183 klIi~~--~s~~-g~~~d~~~i---~~ia~~~g~~livD~a~~~gl-v~~g~~~~p~~----~aDiv~~s~~K~l~Gprg 251 (471)
+||.+. ++.. |...|++++ .++|+++|+.|+.|+|..... ++.| .|+. .+|-|.-.++|.|..|-|
T Consensus 156 ~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasg---V~vk~i~~~fDSVsiCLSKglgAPVG 232 (384)
T KOG1368|consen 156 KLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASG---VPVKKICSAFDSVSICLSKGLGAPVG 232 (384)
T ss_pred eEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcC---CCHHHHHHhhhhhhhhhhccCCCCcc
Confidence 788764 3444 488888755 578999999999999876332 2222 2332 578898999999999999
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhh---hhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDK---INFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNY 328 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~---i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~ 328 (471)
.+|++++ ++.++ ++++. .||.-...+.+.| |+ .++.+.+. ..++..+.++.|++.
T Consensus 233 SViVG~k---------------~FI~kA~~~RKal----GGGmRQsGvLaaa-aL-val~~~~~-~L~~dHk~A~~lAe~ 290 (384)
T KOG1368|consen 233 SVIVGSK---------------DFIDKARHFRKAL----GGGMRQSGVLAAA-AL-VALDENVP-LLRADHKRAKELAEY 290 (384)
T ss_pred cEEEccH---------------HHHHHHHHHHHHh----cCchhHHHHHHHH-HH-HHhhcchH-HHHHHHHHHHHHHHH
Confidence 9999988 44443 33332 1222222222111 22 22233444 556778889999999
Q ss_pred HHcCC-ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 329 LTGKG-YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 329 L~~~g-~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
++..+ +++-....+++++.+.+...+++.+++.+.+++.||.+-.+ + ...+||.+.. ..+.++++.
T Consensus 291 ~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~----~-----s~r~Rivlh~----Qvt~~~ve~ 357 (384)
T KOG1368|consen 291 INTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGG----A-----SRRIRIVLHH----QVTDEDVEY 357 (384)
T ss_pred hccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeec----c-----ccceEEEEEE----ecCHHHHHH
Confidence 98875 88755546677777777777899999999999999998442 1 3469998743 456899999
Q ss_pred HHHHHHH
Q 012104 408 IGEFLHR 414 (471)
Q Consensus 408 l~~~i~~ 414 (471)
+...+.+
T Consensus 358 ~~~~~~k 364 (384)
T KOG1368|consen 358 VKSVLSK 364 (384)
T ss_pred HHHHHHH
Confidence 9888853
No 248
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.79 E-value=1.3e-16 Score=162.85 Aligned_cols=310 Identities=12% Similarity=0.067 Sum_probs=190.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcC----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~---- 119 (471)
.|.+.+++.+.+.+ +..+. +.+. .+...++| ++++++++.+. .+.++||++|+.+++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~---~~~~-~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTS---RAFR-NDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccc---cccC-CHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 78999998877744 22121 1111 23333444 56778888653 46678999999999988742
Q ss_pred -----CC-CEEEEeCCCCCCcccccccccCCccceeccce-----e-----EEEeeeecCCCCCCCHHHHHHHhhhCCCc
Q 012104 120 -----PH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----F-----ESLPYKVNSSTGYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 120 -----pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~-----~~~~~~v~~~~~~iD~~~le~~~~~~~pk 183 (471)
+| ++|++.+-.|.|... +. +...+.. + .+..+ ...|++++++.+.+ +++
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~le~~i~~-~~~ 189 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTL-SI-------VGFSTDPDARGGFGPFTPGFRVV------PFGDAEALEAAITP-NTV 189 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccH-HH-------HhccCCccccccCCCCCCCeEEe------CCCCHHHHHHHhCC-CeE
Confidence 24 788888765533210 00 0011000 0 11111 13589999998864 788
Q ss_pred EEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCC--CCeE
Q 012104 184 LIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG--PRAG 252 (471)
Q Consensus 184 lIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~G--prgG 252 (471)
+|++. .+++|...+ +++|+++|+++|+++|+|++|. |+...|... .... .+|++++| |+|.| .++|
T Consensus 190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig 266 (401)
T PRK00854 190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVS 266 (401)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeE
Confidence 88866 678888886 8999999999999999999996 654433210 1112 46887764 99754 3688
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+++++++ +.+.+.........++ +....++...+|+.+.. ....++..++.+++.+.|++.
T Consensus 267 ~v~~~~~---------------~~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 267 AVLSNSE---------------VLGVLKPGQHGSTFGG-NPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred EEEEcHH---------------HHhcccCCCCCCCCCc-CHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh
Confidence 9998873 3333332212222333 33333444445654322 235567777888889999876
Q ss_pred CceEeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 333 GYSLVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 333 g~~i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
++..+.. .....++.+.+.+...+..++.+.|.+.||.+.+. ..+.+|++++.. .++++++++.+.
T Consensus 328 ~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~---------~~~~lR~~p~~~----~t~e~i~~~i~~ 394 (401)
T PRK00854 328 RSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDT---------HDHTIRLAPPLV----ITREQVDWALEQ 394 (401)
T ss_pred ccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecC---------CCCEEEEeCCcc----cCHHHHHHHHHH
Confidence 5442211 12234444555333335667888888889998531 236899997544 348999999999
Q ss_pred HHHHHH
Q 012104 412 LHRAVT 417 (471)
Q Consensus 412 i~~~l~ 417 (471)
|++++.
T Consensus 395 l~~~l~ 400 (401)
T PRK00854 395 IAKVLA 400 (401)
T ss_pred HHHHhh
Confidence 988763
No 249
>PRK07505 hypothetical protein; Provisional
Probab=99.78 E-value=3.2e-16 Score=159.91 Aligned_cols=333 Identities=15% Similarity=0.091 Sum_probs=186.1
Q ss_pred CCeeEecCCCCC----cHHHHHHHhhhhhccCC-CCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASENFT----SFAVIEALGSALTNKYS-EGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n~~----s~~v~~a~~~~l~~~~~-~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
..|++.. .+++ .|+|++|+...+. +|. .+..+.+.....+...+ .+++++++++. . .+..+||
T Consensus 47 ~~ld~~s-~~~lgl~~~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~~~~~----l~~~la~~~~~-~-----~~~~~sG 114 (402)
T PRK07505 47 TFVNFVS-CSYLGLDTHPAIIEGAVDALK-RTGSLHLSSSRTRVRSQILKD----LEEALSELFGA-S-----VLTFTSC 114 (402)
T ss_pred eEEEeec-CCccCCCCCHHHHHHHHHHHH-HhCCCCCCccchhhhhHHHHH----HHHHHHHHhCC-C-----EEEECCh
Confidence 3466654 3444 7999999988774 332 11112221112222233 34678889887 3 2556789
Q ss_pred HHHHHHHHHHh----cCCCC-EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCC
Q 012104 107 SPANFAAYTAV----LEPHD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR 181 (471)
Q Consensus 107 t~A~~~~~~al----l~pGD-~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~ 181 (471)
+.|+..++..+ ..+|+ .|++.+..+ |+..... ......+ ..++.++ ..|++++++++.. +
T Consensus 115 ~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~-----H~s~~~~-~~~~~~~--~~v~~~~------~~d~~~l~~~~~~-~ 179 (402)
T PRK07505 115 SAAHLGILPLLASGHLTGGVPPHMVFDKNA-----HASLNIL-KGICADE--TEVETID------HNDLDALEDICKT-N 179 (402)
T ss_pred HHHHHHHHHHHHhcccCCCCCCEEEEchhh-----hHhHHhh-hhhhhcC--CeEEEeC------CCCHHHHHHHHhc-C
Confidence 99998777543 23343 244444322 2211000 0111111 2333332 2589999998864 4
Q ss_pred CcEEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhc-cccC-C---CC--CCCccEEEeCCCCcCCCCCeE
Q 012104 182 PKLII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVA-AQEA-A---NP--FEYCHIVTTTTHKSLRGPRAG 252 (471)
Q Consensus 182 pklIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~-~g~~-~---~p--~~~aDiv~~s~~K~l~GprgG 252 (471)
+++++ ++ .+++|..+++++|+++|+++|++||+|++|+.+... .|.. . .. .+...++++|++|++.++ ||
T Consensus 180 ~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg 258 (402)
T PRK07505 180 KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GG 258 (402)
T ss_pred CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-Ce
Confidence 55554 54 678899999999999999999999999999643221 1211 0 11 112247788999998654 78
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCC-CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQ-GGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~-g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
++++.++ ++.+.+.....+... ++++...+++...+++....+.+.+..+++.++.+.+.+.+..
T Consensus 259 ~~~~~~~--------------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 324 (402)
T PRK07505 259 VIMLGDA--------------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT 324 (402)
T ss_pred EEEeCCH--------------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh
Confidence 8776442 455555543333333 3344445555545555333334444455555555444333221
Q ss_pred CCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 332 KGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 332 ~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
. + .+....+.++.+.. ..+..++.+.|.+.||.+.+...|.. +...+.|||+.+... +++|++++.+.
T Consensus 325 ~---~--~g~~~~i~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~~~p~~--~~~~~~lRi~~~~~~----t~eei~~~~~~ 392 (402)
T PRK07505 325 E---Q--SGSFLPIRLIYIGD-EDTAIKAAKQLLDRGFYTSPVFFPVV--AKGRAGLRIMFRASH----TNDEIKRLCSL 392 (402)
T ss_pred c---C--CCCCCCEEEEEeCC-HHHHHHHHHHHHHCCCeEeeecCCCC--CCCCceEEEecCccC----CHHHHHHHHHH
Confidence 1 1 11222222333321 11345677888889999987543321 112368999986543 48999999999
Q ss_pred HHHHHHH
Q 012104 412 LHRAVTL 418 (471)
Q Consensus 412 i~~~l~~ 418 (471)
|.+++..
T Consensus 393 l~~~l~~ 399 (402)
T PRK07505 393 LKEILDE 399 (402)
T ss_pred HHHHHHh
Confidence 9988754
No 250
>PLN02368 alanine transaminase
Probab=99.78 E-value=3.4e-17 Score=166.38 Aligned_cols=244 Identities=11% Similarity=0.029 Sum_probs=157.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCceeeecCChH-HHHHHHHHHhc-CCCCEEEEeCCCCCCcccccccccCCccceeccce
Q 012104 76 DEIENLCRSRALQTFHLDPTQWGVNVQPYSGS-PANFAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY 153 (471)
Q Consensus 76 ~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt-~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~ 153 (471)
..+.+...+++.+.+|.+.+. -+|..++|+ +|+..++.+++ +|||+|++++|.|.++.. .+...|.
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~--~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~---------~~~~~g~- 177 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDP--ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA---------TISLLGG- 177 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCCh--hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH---------HHHHcCC-
Confidence 344444446666666754221 245555665 69999999998 799999999999987643 1223443
Q ss_pred eEEEeeeecCC-CCCCCHHHHHHHhhhC-----CCcEE-EEc-CCCCCccccHHHH---HHHHHHhCCEEEEeccccchh
Q 012104 154 FESLPYKVNSS-TGYIDYDKLEEKALDF-----RPKLI-ICG-GSAYPRDWDYARF---RAVADKCGALLLCDMAHISGL 222 (471)
Q Consensus 154 ~~~~~~~v~~~-~~~iD~~~le~~~~~~-----~pklI-i~~-~s~~g~~~d~~~i---~~ia~~~g~~livD~a~~~gl 222 (471)
++++++++++ ++.+|++++++.++.. ++|++ +++ +||+|.+++.+++ .++|+++|++||+|++|. .+
T Consensus 178 -~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~-~l 255 (407)
T PLN02368 178 -TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQ-QN 255 (407)
T ss_pred -EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcccc-cc
Confidence 5566666643 4789999999988631 57855 466 7899999987655 567899999999999997 66
Q ss_pred hcccc--CCCC------C----C-Ccc-EEEeCCCCcC---CCCCeEEEEe---eCCCCCCCCCCCCCcccchHhhhhhc
Q 012104 223 VAAQE--AANP------F----E-YCH-IVTTTTHKSL---RGPRAGMIFY---RKGPKPPKKGQPEGAVYDFEDKINFA 282 (471)
Q Consensus 223 v~~g~--~~~p------~----~-~aD-iv~~s~~K~l---~GprgG~i~~---~~~~~~~~~~~~~i~~~~l~~~i~~~ 282 (471)
++.+. +++. + . +.. |++.|++|++ +|+|.||+++ ++ ++.+.+.+.
T Consensus 256 ~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~---------------~li~~~~~~ 320 (407)
T PLN02368 256 IYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP---------------KTVEEIYKV 320 (407)
T ss_pred ccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH---------------HHHHHHHHH
Confidence 66542 2221 1 1 112 7789999984 7999999985 43 445545443
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHhc---------cHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEcc
Q 012104 283 VFPSLQGGPHNHQIGALAVALKQAS---------TPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLR 351 (471)
Q Consensus 283 ~~~~~~g~p~~~~iaa~a~al~~~~---------~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~ 351 (471)
.. ...+.+...+. +...++..-. ..+.+++.+...++++.+.+.|++. |+.+. .+.+++++|+++.
T Consensus 321 ~~-~~~~~~~~~Q~-aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~~i~ 396 (407)
T PLN02368 321 AS-IALSPNVSGQI-FMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFPQIK 396 (407)
T ss_pred hc-ccCCCCcHHHH-HHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC-CCCeeeEeccCCC
Confidence 21 11222233333 3333453210 0112345667788888999999987 88764 4567888887664
No 251
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=3.5e-17 Score=164.88 Aligned_cols=213 Identities=18% Similarity=0.192 Sum_probs=144.7
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +.+++++|.+. .+.++||+.|+.+++ ++++|||+|++.++.|++.+.... ..+...
T Consensus 48 ~~p~~~~Le----~~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~-----~~~~~~ 112 (377)
T PRK07671 48 GNPTRAALE----ELIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMT-----KVLNRF 112 (377)
T ss_pred CChHHHHHH----HHHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHH-----HHHhcC
Confidence 345566666 57889999875 355789998877665 578999999999998876532100 001112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.++ ..|++++++++++ ++|+|++. +||+|...|+++|+++|+++|+++++|++|..+..
T Consensus 113 G--~~v~~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~----- 178 (377)
T PRK07671 113 G--IEHTFVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW----- 178 (377)
T ss_pred C--eEEEEEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc-----
Confidence 3 3444442 2489999998864 78988753 67899999999999999999999999999864322
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|+. ++|++++|++|++.||. +|+++++++ ++.+++...... .|+......+.+ +++
T Consensus 179 ~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~--------------~l~~~~~~~~~~--~g~~~~~~~a~l--~~~ 240 (377)
T PRK07671 179 QSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP--------------ELAEDLHFVQNS--TGGILGPQDSWL--LLR 240 (377)
T ss_pred CChhhhCCeEEEecCcccccCCccceeEEEEeCcH--------------HHHHHHHHHHHh--hcCCCCHHHHHH--HHc
Confidence 23455 78999999999998884 587777653 455444432111 112111121222 233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+. .+....++..+|++.+.+.|++.
T Consensus 241 ~l~--tl~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 241 GLK--TLGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred CcC--hHHHHHHHHHHHHHHHHHHHHcC
Confidence 332 35567788889999999999976
No 252
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.78 E-value=7e-17 Score=165.45 Aligned_cols=331 Identities=18% Similarity=0.100 Sum_probs=196.7
Q ss_pred CCeeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~n-----~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
..|++..+.+ ..+|.|.+++...+... . .++... +..+... ...++++++++.+.+ ..+.++||
T Consensus 37 ~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~-~-~~~~~~--~~~~~~~----~l~~~l~~~~~~~~~---~v~~~~sg 105 (413)
T cd00610 37 RYLDFLSGIGVLNLGHNHPEVVEALKEQLAKL-T-HFSLGF--FYNEPAV----ELAELLLALTPEGLD---KVFFVNSG 105 (413)
T ss_pred EEEEcCccHHhhccCCCCHHHHHHHHHHHHhC-c-CccCcc--cCCHHHH----HHHHHHHHhCCCCCC---EEEEcCcH
Confidence 4566665422 24789999988777321 1 111100 0122222 334678889985433 24567899
Q ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceeccc----------eeEEEeeeecC-----CCCCCC
Q 012104 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI----------YFESLPYKVNS-----STGYID 169 (471)
Q Consensus 107 t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~----------~~~~~~~~v~~-----~~~~iD 169 (471)
++|+.+++..+ ..++|+|++.++.|.|+.... +...+. ...++.++.++ .....|
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 177 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGA--------LSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADD 177 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHH--------HHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHH
Confidence 99999999877 468999999998876643211 111110 11222333221 113448
Q ss_pred HHHHHHHhhhC--CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEE
Q 012104 170 YDKLEEKALDF--RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIV 238 (471)
Q Consensus 170 ~~~le~~~~~~--~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv 238 (471)
++++++.+..+ ++++|++. ++++|...+ +++|+++|+++|+++++|++|. |+...|.. . .... ..|++
T Consensus 178 ~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~ 256 (413)
T cd00610 178 LEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV 256 (413)
T ss_pred HHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE
Confidence 99999988753 56777776 455677776 8999999999999999999997 54222211 1 1111 34665
Q ss_pred EeCCCCcCCC-CCeEEEEeeCCCCCCCCCCCCCcccchHhhh--hhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHH
Q 012104 239 TTTTHKSLRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKI--NFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (471)
Q Consensus 239 ~~s~~K~l~G-prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i--~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~ 315 (471)
|++|++.+ .+.|++++++ ++.+.+ ....+.+..+++. ..+++...+++.+.. .+..
T Consensus 257 --t~sK~l~~g~~~g~~~~~~---------------~~~~~~~~~~~~~~~t~~~~~-~~~~a~~a~l~~l~~---~~~~ 315 (413)
T cd00610 257 --TLGKGLGGGLPLGAVLGRE---------------EIMDAFPAGPGLHGGTFGGNP-LACAAALAVLEVLEE---EGLL 315 (413)
T ss_pred --EEcccccCccccEEEEEcH---------------HHHHhhccCCCCCCCCCCcCH-HHHHHHHHHHHHHHh---ccHH
Confidence 45699754 5678888876 455443 2221222223322 233444445655433 2455
Q ss_pred HHHHHHHHHHHHHHHcCCc--eEee-CCCCCeeEEEEccCCC-------CCHHHHHHHHhhcCeEeccCCcCCCCCCCCC
Q 012104 316 KQVKANAVALGNYLTGKGY--SLVT-GGTENHLVLWDLRPLG-------LTGNKVEKLCDLCNITVNKNAVFGDSSALAP 385 (471)
Q Consensus 316 ~~~~~na~~l~~~L~~~g~--~i~~-~~~~~~~~~v~~~~~~-------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 385 (471)
+++.++.+++.+.|++.+. .++. ....+.++++.+.... .+...+.+.|.++||.+.++. .
T Consensus 316 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~---------~ 386 (413)
T cd00610 316 ENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG---------G 386 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC---------C
Confidence 6677777888887776421 2221 1123456677664321 245667788889999997642 3
Q ss_pred CeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 386 GGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 386 ~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+.+|++++.. .++++++++.+.|.+++
T Consensus 387 ~~lR~~~~~~----~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 387 NVIRLLPPLI----ITEEEIDEGLDALDEAL 413 (413)
T ss_pred CEEEEECCCc----CCHHHHHHHHHHHHHhC
Confidence 6799987554 34899999999887653
No 253
>PRK07049 methionine gamma-lyase; Validated
Probab=99.78 E-value=3.4e-17 Score=167.39 Aligned_cols=216 Identities=18% Similarity=0.139 Sum_probs=146.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.....+| +.++++.|.+. .+.++||+.|+.+++.++++|||+|++.+|.|+++.... . ..+...|
T Consensus 83 Pt~~~Le----~~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~--~---~~l~~~G- 147 (427)
T PRK07049 83 PNSEIVE----DRLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLL--A---KTFRNFG- 147 (427)
T ss_pred cCHHHHH----HHHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHH--H---HHHHhcC-
Confidence 3445666 56788998764 466789999999999999999999999999998874210 0 0011123
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhh----hCCCcEEEEc--CCCCCccccHHHHHHHHHH------hCCEEEEeccccc
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKAL----DFRPKLIICG--GSAYPRDWDYARFRAVADK------CGALLLCDMAHIS 220 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~----~~~pklIi~~--~s~~g~~~d~~~i~~ia~~------~g~~livD~a~~~ 220 (471)
.+++.+. + ..|++++++.+. ..++|+|++. +||+|..+|++++.++|+. +++++++|+++..
T Consensus 148 -i~~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 -VGAVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred -cEEEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 3434442 1 367888877664 2468888754 7899999999999999988 7999999999763
Q ss_pred hhhccccCCCCCC-CccEEEeCCCCcCCC---CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHH
Q 012104 221 GLVAAQEAANPFE-YCHIVTTTTHKSLRG---PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 221 glv~~g~~~~p~~-~aDiv~~s~~K~l~G---prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~i 296 (471)
.+ ...|+. ++|+++.|++|++.| .|+|+++.++ ++.+++.....+. .++......
T Consensus 222 ~~-----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~---------------~l~~~l~~~~~~~-g~~ls~~~a 280 (427)
T PRK07049 222 PV-----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK---------------ALIRQVRALRSAI-GTQLDPHSC 280 (427)
T ss_pred cc-----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH---------------HHHHHHHHHHHhc-CCCCCHHHH
Confidence 22 223555 689999999999764 5899998776 4555554332221 112222221
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce
Q 012104 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYS 335 (471)
Q Consensus 297 aa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~ 335 (471)
.. +++.+ . .+....++..+|++.+++.|++. ++.
T Consensus 281 ~l---~~r~L-~-tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 281 WM---LGRSL-E-TLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred HH---HHcCC-C-hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 11 22222 2 35566778899999999999987 443
No 254
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=7.8e-17 Score=163.59 Aligned_cols=159 Identities=18% Similarity=0.241 Sum_probs=121.5
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+..++.+| +.++++.|.++ + +.+.||+.|+.+++.++++|||+|+++.+.|++.... .. ..+...
T Consensus 59 ~nPtv~~lE----~~la~leg~~~----a-v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~--~~---~~l~~~ 124 (432)
T PRK06702 59 GNPTLAAFE----QKLAELEGGVG----A-VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNL--FG---VSLRKL 124 (432)
T ss_pred CCcHHHHHH----HHHHHHhCCCc----E-EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--HH---HHHHHC
Confidence 456677787 57888999876 3 6688999999999999999999999999998865321 00 001223
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .++..+ + ..+|++++++++++ ++|+|++. .||.+.+.|+++|+++|+++|+++++|+++...+ .
T Consensus 125 G--i~v~~v--d---~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~-----~ 191 (432)
T PRK06702 125 G--IDVTFF--N---PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPY-----L 191 (432)
T ss_pred C--CEEEEE--C---CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchh-----h
Confidence 3 344443 2 35799999999974 79999865 6788999999999999999999999999985332 3
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEe
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~ 256 (471)
..|++ +|||++.|++|++.|.- +|+++.
T Consensus 192 ~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 192 CQAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred CChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 45676 79999999999998864 355553
No 255
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=2.9e-17 Score=168.17 Aligned_cols=212 Identities=20% Similarity=0.200 Sum_probs=143.0
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| +++++++|.+. .+.++||+.|+.+++ .+++|||+|++.++.|+++.... . ..+...
T Consensus 131 gnpt~~aLE----~~lA~leg~e~-----ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll--~---~~l~~~ 195 (464)
T PLN02509 131 GNPTRDALE----SLLAKLDKADR-----AFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLL--S---QVVPRS 195 (464)
T ss_pred CCHHHHHHH----HHHHHHhCCCE-----EEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHH--H---HHHHHC
Confidence 555666666 56788888764 355688988875544 67999999999999988753100 0 001112
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
| .+++.+ + ..|++++++.+. .++|+|++. .||+|...|+++|+++|+++|+++++|++|+.+..
T Consensus 196 G--~~v~~v--d----~~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~----- 261 (464)
T PLN02509 196 G--VVVKRV--N----TTNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL----- 261 (464)
T ss_pred C--eEEEEe--C----CCCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-----
Confidence 3 333333 2 347899999886 468888754 68899999999999999999999999999976643
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al 303 (471)
..|+. ++|++++|+||++.|+. ||++.++++ .+.+++.... ..+ +...... +++ .+
T Consensus 262 ~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~--------------~l~~~~~~~~~~~g--~~l~p~~-A~l--~l 322 (464)
T PLN02509 262 SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------KLAKEVYFLQNSEG--SGLAPFD-CWL--CL 322 (464)
T ss_pred CChhhcCCcEEEecCcccccCCCccceeEEEeccH--------------HHHHHHHHHHHhcC--CCcCHHH-HHH--HH
Confidence 23454 79999999999998864 688877653 3333322111 111 1112222 222 23
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+.+. .+....++..+|++.+++.|+++
T Consensus 323 r~L~--tL~~R~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 323 RGIK--TMALRIEKQQENARKIAMYLSSH 349 (464)
T ss_pred hhhh--hHHHHHHHHHHHHHHHHHHHhcC
Confidence 3322 45678889999999999999876
No 256
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.78 E-value=2.2e-16 Score=156.52 Aligned_cols=336 Identities=15% Similarity=0.147 Sum_probs=220.0
Q ss_pred CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcC-C
Q 012104 42 FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE-P 120 (471)
Q Consensus 42 ~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~-p 120 (471)
.+|++.++||.. |...|+|...+..+| +.++++||.++ .+.+++|..|+..++..+++ |
T Consensus 54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Le----e~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----------CCcccccCchHHHHH----HHHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 368888888863 223455666667787 56788999886 47788999999999999998 8
Q ss_pred CCEEEEeCC----CCCCcccccccccCCccceeccceeEEEee------ee-cCCCCCCCHHHHHHHhhhCCC---cEEE
Q 012104 121 HDRIMGLDL----PSGGHLTHGYYTSGGKKISATSIYFESLPY------KV-NSSTGYIDYDKLEEKALDFRP---KLII 186 (471)
Q Consensus 121 GD~Vl~~~~----~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~------~v-~~~~~~iD~~~le~~~~~~~p---klIi 186 (471)
||++.+... .|..|+. .++..+...|.....+.. .+ .+..|.+|+++|++.++++.+ -.+.
T Consensus 114 g~e~g~~~~~~~v~hn~~fe-----tt~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~ 188 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFD-----TTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_pred cccccccccccccceEEEEe-----cchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeee
Confidence 999886554 3333322 111122344433222211 11 123589999999999985322 2222
Q ss_pred ---EcCCCCCccccHH---HHHHHHHHhCCEEEEeccccch-h--------hccccCCCC-----CCCccEEEeCCCCcC
Q 012104 187 ---CGGSAYPRDWDYA---RFRAVADKCGALLLCDMAHISG-L--------VAAQEAANP-----FEYCHIVTTTTHKSL 246 (471)
Q Consensus 187 ---~~~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~g-l--------v~~g~~~~p-----~~~aDiv~~s~~K~l 246 (471)
++++.-|.+++++ +++++|+++|+.++.|+|-.+. . .+.+..+.. +.++|.++.|++|-+
T Consensus 189 ~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKgl 268 (467)
T TIGR02617 189 ATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_pred eeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCC
Confidence 2233346666665 6668999999999999987543 2 233332222 258999999999999
Q ss_pred CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-----CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 012104 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (471)
Q Consensus 247 ~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-----~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~n 321 (471)
..|-||+++++++- + +++.++.+.. -|+. .||..-.-+.|+|+.|.+... ..|.++....
T Consensus 269 gApvGg~Lag~d~~---------~--~~l~~~~~~~~i~~EGf~t-YGGlagrd~ea~a~Gl~e~~~---~~yl~~ri~q 333 (467)
T TIGR02617 269 MVPMGGLLCFKDDS---------F--FDVYTECRTLCVVQEGFPT-YGGLEGGAMERLAVGLYDGMN---LDWLAYRINQ 333 (467)
T ss_pred CCcccceEEecchh---------H--HHHHHHHHhhcccccCCcC-cCchhHHHHHHHHhhhhhccc---HHHHHHHHHH
Confidence 89999999998850 0 0233333321 2333 467777888899999998765 3677777888
Q ss_pred HHHHHHHHHcCCceEeeCCCCCeeEEEEccC-------CCCCHHHH-HHHHhhcCeEe-ccCCcCC--CC---CCCC--C
Q 012104 322 AVALGNYLTGKGYSLVTGGTENHLVLWDLRP-------LGLTGNKV-EKLCDLCNITV-NKNAVFG--DS---SALA--P 385 (471)
Q Consensus 322 a~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~-------~~~~~~~~-~~~L~~~gI~v-~~~~~p~--~~---~~~~--~ 385 (471)
.++|.+.|.+.|+.++. ++.|-+++|... ....++.+ ..+-.+.||.. ..+++.. |+ .... -
T Consensus 334 v~yl~~~L~~~Gvpi~~--~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~ 411 (467)
T TIGR02617 334 VQYLVNGLEEIGVVCQQ--AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPA 411 (467)
T ss_pred HHHHHHHHHhCCCcEEe--cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCcc
Confidence 89999999999999975 778888888532 12334444 44446778862 2333311 11 1111 2
Q ss_pred CeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 386 GGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 386 ~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
.-+|+..| +|-.+.+.|+.+++.+..+.++...+
T Consensus 412 el~Rlaip---Rrvyt~~h~d~v~~~~~~~~~~~~~i 445 (467)
T TIGR02617 412 ELLRLTIP---RATYTQTHMDFIIEAFKHVKENAPNI 445 (467)
T ss_pred ceeeeccc---cccccHhHHHHHHHHHHHHHhhhhhc
Confidence 47898754 46677899999999999988876544
No 257
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=7.9e-17 Score=164.63 Aligned_cols=160 Identities=19% Similarity=0.165 Sum_probs=119.3
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| ++++++.|.+. .+.++||+.|+.+++.++++|||+|++.++.|++.+.- + . .. ..
T Consensus 62 ~~p~~~~Le----~~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~-~-~---~~--~~ 125 (431)
T PRK08248 62 MNPTTDVFE----KRIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNL-F-A---HT--LP 125 (431)
T ss_pred CCchHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHH-H-H---HH--HH
Confidence 344566676 56888999765 46689999999999999999999999999888764320 0 0 00 11
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
..+.+++.+++ .|++++++++.+ ++++|++. .||+|...|+++|.++|+++|+++++|+++..+. .
T Consensus 126 ~~Gv~v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~-----~ 193 (431)
T PRK08248 126 KLGITVKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY-----L 193 (431)
T ss_pred hCCEEEEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc-----c
Confidence 22345555432 489999998864 78988764 6889999999999999999999999999986442 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeC
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~ 258 (471)
..|+. ++|+++.|+||++.|+. ||+++.+.
T Consensus 194 ~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 194 LRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred CChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 34555 79999999999998774 45555443
No 258
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.5e-17 Score=165.21 Aligned_cols=158 Identities=20% Similarity=0.191 Sum_probs=119.6
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++..++.+| ++++++.|.++ + +.+.||+.|+.+++.+++++||+|++.+..|++...-. . . ...
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~----a-v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~---~---~-~l~ 125 (433)
T PRK08134 62 SNPTVAVLE----ERVAALEGGVG----A-IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLL---H---Y-TLR 125 (433)
T ss_pred cChHHHHHH----HHHHHHhCCCc----E-EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHH---H---H-HHh
Confidence 345566666 57889999876 3 66899999999999999999999999998887642100 0 0 011
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
..+.+++.++++ |++++++++.. ++|+|++. .|++|.+.|+++|+++|+++|+++++|++|.++..
T Consensus 126 ~~Gi~v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~----- 193 (433)
T PRK08134 126 RFGIETTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL----- 193 (433)
T ss_pred hCCeEEEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 123455554322 89999999874 78988865 67889999999999999999999999999986643
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEe
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~ 256 (471)
+.|+. ++|++++|.||++.|+. ||+++.
T Consensus 194 ~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 194 LRPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred CCchhcCCCEEEeccccccCCCCCceEEEEEe
Confidence 34566 89999999999987765 355553
No 259
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=6.8e-17 Score=164.92 Aligned_cols=153 Identities=19% Similarity=0.096 Sum_probs=115.4
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
++...+.+| +++++++|.+. .+.++||+.|+.+++.++++|||+|++....|++...-. . . ...
T Consensus 67 ~~p~~~~Le----~~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~--~----~-~l~ 130 (436)
T PRK07812 67 MNPTQDVVE----QRIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLF--H----Y-TLP 130 (436)
T ss_pred CCchHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHH--H----H-Hhh
Confidence 345566676 57889999876 366789999999999999999999999988877643100 0 0 011
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
..+++++.++ + ..|++++++.++ .++++|++. .||+|...|+++|+++|+++|+++++|++|..+. .
T Consensus 131 ~~Gi~v~~vd-d----~~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~-----~ 199 (436)
T PRK07812 131 KLGIEVSFVE-D----PDDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPY-----L 199 (436)
T ss_pred cCeEEEEEEC-C----CCCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccc-----c
Confidence 1233444432 2 238999999886 478888864 6889999999999999999999999999997653 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR 250 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr 250 (471)
+.|+. ++|+++.|+||++.|+.
T Consensus 200 ~~pl~~GaDivv~S~tK~lgg~G 222 (436)
T PRK07812 200 IRPLEHGADIVVHSATKYLGGHG 222 (436)
T ss_pred CCchhcCCCEEEEecccccCCCC
Confidence 45666 79999999999997764
No 260
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=3.6e-16 Score=159.43 Aligned_cols=318 Identities=18% Similarity=0.141 Sum_probs=190.1
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCC-C
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH-D 122 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pG-D 122 (471)
+|.+.+++...+... . ....+| ..... .++ .++++++++.+..+ ..+.+.||++|+.+++..+..+| +
T Consensus 61 ~p~v~~ai~~~~~~~-~--~~~~~~-~~~~~-~~l----a~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLATL-G--HVSNLF-ATEPQ-IAL----AERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHHhc-c--CccCcc-CCHHH-HHH----HHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 589999887776442 1 111222 21111 222 35677788754211 24557889999999998776676 5
Q ss_pred EEEEeCCCCCCcccccccccCCccceeccceeEEEee-eecCCC---CCCCHHHHHHHhhhCCCcEEEEc--CCCCCccc
Q 012104 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSST---GYIDYDKLEEKALDFRPKLIICG--GSAYPRDW 196 (471)
Q Consensus 123 ~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-~v~~~~---~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~ 196 (471)
.|+..++.|.|+.. + .+...+.......+ +...+. ...|++.+++.+. .++++|++. +|++|...
T Consensus 130 ~ii~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aviiep~~~~~G~~~ 200 (398)
T PRK03244 130 KIVAAEGGFHGRTM-G-------ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD-DDTAAVFLEPIQGEAGVVP 200 (398)
T ss_pred eEEEECCCcCCccH-H-------HHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc-CCeEEEEEecccCCCCCcC
Confidence 67777766655421 0 01111110000000 000000 1248999998885 467877755 67888888
Q ss_pred c----HHHHHHHHHHhCCEEEEeccccchhhccccCC-CCC-C-CccEEEeCCCCcCC-CCCeEEEEeeCCCCCCCCCCC
Q 012104 197 D----YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NPF-E-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQP 268 (471)
Q Consensus 197 d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~-~p~-~-~aDiv~~s~~K~l~-GprgG~i~~~~~~~~~~~~~~ 268 (471)
+ +++|+++|+++|+++|+|++|. |+-..|... ... . ..|+++ ++|+|. |.+.|+++.++
T Consensus 201 ~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t--~sK~l~~G~~ig~~~~~~---------- 267 (398)
T PRK03244 201 PPAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVT--LAKGLGGGLPIGACLAFG---------- 267 (398)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEE--EchhhhCCcccEEEEEcH----------
Confidence 7 7899999999999999999996 653333211 111 1 357764 469975 45778888876
Q ss_pred CCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeC-CCCCeeEE
Q 012104 269 EGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG-GTENHLVL 347 (471)
Q Consensus 269 ~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~-~~~~~~~~ 347 (471)
++.+.+.........+++.. ..++...+++.+.. .++.+++.+..++|.+.|++.++.++.. .....+++
T Consensus 268 -----~~~~~~~~~~~~~t~~~~~~-~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~ 338 (398)
T PRK03244 268 -----PAADLLTPGLHGSTFGGNPV-ACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLG 338 (398)
T ss_pred -----HHHhhccCCCCcCCCCCCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEE
Confidence 44444433222222333333 33333345554432 2455667777888999998866542211 11345677
Q ss_pred EEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 348 WDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 348 v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+.+... ....+.+.|.++||.+.+. ..+.||++++... +++|++++.+.|.+++..
T Consensus 339 i~~~~~--~~~~~~~~l~~~Gv~~~~~---------~~~~iR~~p~~~~----t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 339 IVLTAP--VAKAVEAAAREAGFLVNAV---------APDVIRLAPPLII----TDAQVDAFVAALPAILDA 394 (398)
T ss_pred EEEecc--HHHHHHHHHHHCCeEEeec---------CCCEEEEECCCcC----CHHHHHHHHHHHHHHHHh
Confidence 777432 3566788888899999652 1368999976543 489999999999998864
No 261
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=1.2e-16 Score=160.47 Aligned_cols=244 Identities=18% Similarity=0.164 Sum_probs=154.2
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+.....+| +.++++++ +. .+.++||+.|+.+++.++++|||+|++.++.|++...... ..+...|
T Consensus 50 ~p~~~~Le----~~lA~l~~-~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~-----~~l~~~G 114 (366)
T PRK07582 50 NPTWRALE----AALGELEG-AE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAR-----EYLAPLG 114 (366)
T ss_pred CccHHHHH----HHHHHHcC-CC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHH-----HHHhcCe
Confidence 34455666 45677773 22 4667899999999999999999999999988866431100 0011123
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
.+++.++.+. . .+ .+. .++++|++. .||++...|+++|.++|+++|+++++|++|.... +.
T Consensus 115 --~~v~~v~~~~-~----~~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~~-- 177 (366)
T PRK07582 115 --VTVREAPTAG-M----AE----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---GQ-- 177 (366)
T ss_pred --EEEEEECCCC-h----HH----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---cc--
Confidence 3444444331 1 11 122 367888754 6788888999999999999999999999986321 22
Q ss_pred CCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHH
Q 012104 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 230 ~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~ 304 (471)
.|++ ++|++++|+||++.||. +|+++++++ ++.+++.... +.+ +.+.... +. .+++
T Consensus 178 ~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~--------------~l~~~l~~~~~~~g--~~~~~~~-a~--l~~r 238 (366)
T PRK07582 178 RPLELGADLVVASDTKALTGHSDLLLGYVAGRDP--------------ELMAAVERWRLLAG--AIPGPFE-AW--LAHR 238 (366)
T ss_pred CchhcCCcEEEecccccccCCCCeeEEEEEcCcH--------------HHHHHHHHHHHHhC--CCCCHHH-HH--HHHh
Confidence 3444 68999999999998865 588887643 4555444321 111 1222222 12 2233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce-EeeCCC---------------CCeeEEEEccCCCCCHHHHHHHHhhc
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK-GYS-LVTGGT---------------ENHLVLWDLRPLGLTGNKVEKLCDLC 367 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~-i~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~L~~~ 367 (471)
.+. .+....++..+|++.+++.|++. .+. +..++- .+-++.+++. +.+++.++|++.
T Consensus 239 ~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~----~~~~~~~~~~~l 312 (366)
T PRK07582 239 SLG--TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA----DAAAAERFVAAS 312 (366)
T ss_pred ccc--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC----CHHHHHHHHHhC
Confidence 332 34566688889999999999986 333 322221 1234555653 466788888888
Q ss_pred CeEec
Q 012104 368 NITVN 372 (471)
Q Consensus 368 gI~v~ 372 (471)
++...
T Consensus 313 ~~~~~ 317 (366)
T PRK07582 313 RLVVA 317 (366)
T ss_pred Cccee
Confidence 87654
No 262
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.9e-17 Score=164.10 Aligned_cols=159 Identities=21% Similarity=0.226 Sum_probs=117.8
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+...+.+| ++++++.|.+. .+.++||+.|+.+++.++++|||+|++..+.|++.+. ... ..+...|
T Consensus 57 ~pt~~~Le----~~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~--~~~---~~l~~~g 122 (425)
T PRK06084 57 NPTNDVLE----QRVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYN--LLA---HTLPRIG 122 (425)
T ss_pred CchHHHHH----HHHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHH--HHH---Hhcccce
Confidence 34455666 67888999765 3567899999999999999999999999988876432 100 0001112
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
.++..+ + ..|++++++.+.+ ++++|++. +||+|...|+++|.++|+++|++|++|++|+.+.. .
T Consensus 123 --i~v~~~--d----~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~-----~ 188 (425)
T PRK06084 123 --IETRFA--A----HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL-----C 188 (425)
T ss_pred --eEEEEE--C----CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 232222 2 2589999998864 78988865 68999999999999999999999999999985542 3
Q ss_pred CCCC-CccEEEeCCCCcCCCCC---eEEEEeeC
Q 012104 230 NPFE-YCHIVTTTTHKSLRGPR---AGMIFYRK 258 (471)
Q Consensus 230 ~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~ 258 (471)
.|+. ++|++++|+||++.|+. ||+++.+.
T Consensus 189 ~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 189 RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred ChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 4555 79999999999998763 56666543
No 263
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.77 E-value=5.5e-16 Score=157.57 Aligned_cols=313 Identities=16% Similarity=0.130 Sum_probs=181.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh----c
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV----L 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al----l 118 (471)
-.|.|.+++...+.+-+..+ ..+ ..+...++ .++++++++.+. .+.+.||++|+.+++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---NLY--RIPEQERL----AERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---ccc--CChHHHHH----HHHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 37899999888775422111 111 12222222 356667765442 356789999999998876 5
Q ss_pred CCCC----EEEEeCCCCCCcccccccccCCccceeccceeEEEee-eecCC---CCCCCHHHHHHHhhhCCCcEEEEc--
Q 012104 119 EPHD----RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSS---TGYIDYDKLEEKALDFRPKLIICG-- 188 (471)
Q Consensus 119 ~pGD----~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-~v~~~---~~~iD~~~le~~~~~~~pklIi~~-- 188 (471)
.||| +|++.++.|.|+.... +...+.......+ +..++ -...|++++++.+.. ++++|++.
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~ 184 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTLAT--------IAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPI 184 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcHHH--------HhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEecc
Confidence 6787 8999998876553211 1111110000000 00000 013689999998864 78888876
Q ss_pred CCCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcC-CCCCeEEEEeeCCC
Q 012104 189 GSAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSL-RGPRAGMIFYRKGP 260 (471)
Q Consensus 189 ~s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l-~GprgG~i~~~~~~ 260 (471)
+++.|... .+++|+++|+++|+++|+|++|. |+...|.... ... ..|++ |++|.+ +|.|.|++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-- 259 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE-- 259 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH--
Confidence 34455222 57899999999999999999997 7644343111 111 24654 567997 466889998887
Q ss_pred CCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cce-Ee
Q 012104 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYS-LV 337 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~-i~ 337 (471)
++.+.+.........++ +....++...+++.+..+ ++.+++.++.+.+++.|++. .+. ++
T Consensus 260 -------------~~~~~~~~~~~~~t~~~-~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~ 322 (389)
T PRK01278 260 -------------EAAKGMTPGTHGSTYGG-NPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVI 322 (389)
T ss_pred -------------HHHhccCCCCCCCCCCc-cHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 34444433222223333 333333443456654332 23444555555666655542 121 22
Q ss_pred e--CCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 338 T--GGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 338 ~--~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
. .+ ...++++.+.. +..++.+.|.+.||.+.++ ..+.+||+++... ++++++++.+.|.++
T Consensus 323 ~~v~g-~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~---------~~~~lR~~p~~~~----~~~~i~~~l~~l~~~ 385 (389)
T PRK01278 323 EEVRG-KGLLLGLKCVV---PNRDLVQALRDEGLLTVGA---------GDNVVRLLPPLII----TEEEIDEALERLERA 385 (389)
T ss_pred eeEec-ccEEEEEEEec---CHHHHHHHHHHCCeEEeec---------CCCEEEEeCCccc----CHHHHHHHHHHHHHH
Confidence 1 12 23345565532 4667777777779998653 1368999975433 478999999999887
Q ss_pred HH
Q 012104 416 VT 417 (471)
Q Consensus 416 l~ 417 (471)
+.
T Consensus 386 l~ 387 (389)
T PRK01278 386 AE 387 (389)
T ss_pred HH
Confidence 64
No 264
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.5e-16 Score=162.69 Aligned_cols=156 Identities=21% Similarity=0.226 Sum_probs=117.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccc
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI 152 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~ 152 (471)
.....+| +++++++|.+. .+.++||+.|+.+++.++++|||+|++..+.|++.... + . ..+...|
T Consensus 63 p~~~~le----~~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~-~-~---~~~~~~G- 127 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQ-F-G---HAFKSFG- 127 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHH-H-H---HHHHhcC-
Confidence 3455566 57888999875 46678999999999999999999999999998765320 0 0 0011123
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
.+++.++ ..|++++++.+.. ++|+|++. .||+|...|+++|.++|+++|+++++|++|+.++. ..
T Consensus 128 -~~v~~vd------~~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~~ 194 (427)
T PRK05994 128 -WQVRWAD------ADDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----IR 194 (427)
T ss_pred -cEEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----CC
Confidence 3444432 2388999998864 78988864 68899999999999999999999999999986542 34
Q ss_pred CCC-CccEEEeCCCCcCCCCC---eEEEEe
Q 012104 231 PFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (471)
Q Consensus 231 p~~-~aDiv~~s~~K~l~Gpr---gG~i~~ 256 (471)
|++ ++|+++.|+||++.|+. ||+++.
T Consensus 195 pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 195 PIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred ccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 565 79999999999998765 466653
No 265
>PLN02263 serine decarboxylase
Probab=99.77 E-value=1.7e-16 Score=160.71 Aligned_cols=295 Identities=15% Similarity=0.122 Sum_probs=191.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCC-CCCceeeecCChHHHHHHHHHHhc--CCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 74 FIDEIENLCRSRALQTFHLDP-TQWGVNVQPYSGSPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 74 ~~~~lE~~~~~~~~~lfg~~~-~~~~~~v~~~sGt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
...++|+...++++++||.+. +.|| +.+++||+||+.++.+.- .+...|++++-. |.|.. |.+...
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~a---H~Sv~------KAa~ll 198 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRES---HYSVF------KAARMY 198 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCc---cHHHH------HHHHhc
Confidence 356899999999999999976 4465 446888999998877652 244466666644 33321 234455
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCC--CcEEE--EcCCCCCccccHHHHHHHHHHhCC-----EEEEeccccch
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFR--PKLII--CGGSAYPRDWDYARFRAVADKCGA-----LLLCDMAHISG 221 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~--pklIi--~~~s~~g~~~d~~~i~~ia~~~g~-----~livD~a~~~g 221 (471)
|.. .+.++++ +++.+|+++|++.+.+.+ |-+|+ +|.+++|.+-|+++|.++|+++|+ |++||+|++ |
T Consensus 199 gi~--~~~Vp~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~G-G 274 (470)
T PLN02263 199 RME--CVKVDTL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALF-G 274 (470)
T ss_pred CCc--ceEeccC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccch-h
Confidence 654 4455566 578999999999887543 55665 357789999999999999999997 999999997 6
Q ss_pred hhccc-cCCCCCC---CccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHH
Q 012104 222 LVAAQ-EAANPFE---YCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 222 lv~~g-~~~~p~~---~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~i 296 (471)
++..- ....+++ .+|-++.++||++..|-+ |+++++++..... . .-.+.+.. ..++..|+-.....
T Consensus 275 ~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~--~------~~~~Yl~~-~d~ti~gSR~g~~a 345 (470)
T PLN02263 275 LMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVL--S------SNVEYLAS-RDATIMGSRNGHAP 345 (470)
T ss_pred hHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhh--c------cChHhhCC-CCCCcCCCCCcHHH
Confidence 54311 1111233 489999999999888865 8888886421000 0 00111111 12344555444445
Q ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCc
Q 012104 297 GALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV 376 (471)
Q Consensus 297 aa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 376 (471)
+.+..+++.....++++..++..++++++.+.|++.|+.++..+. ...+.+ ... +... ...|..++.
T Consensus 346 l~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~-s~~V~f--~~p--~~~~-----~~~gW~L~~--- 412 (470)
T PLN02263 346 IFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAMLNEL-SSTVVF--ERP--KDEE-----FVRRWQLAC--- 412 (470)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCC-ceEEEE--ecC--chHH-----hhcceEEcc---
Confidence 667778888777899999999999999999999999998765433 333333 221 1111 124555543
Q ss_pred CCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 377 FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 377 p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.+..+||.+.. ..+.+.++++.+-|.+..
T Consensus 413 -------~~~~~Hivvmp----hv~~~~id~fi~DL~~~~ 441 (470)
T PLN02263 413 -------QGNIAHVVVMP----SVTIEKLDYFLKELVEKR 441 (470)
T ss_pred -------CCCcEEEEEcC----CCCHHHHHHHHHHHHHHH
Confidence 12358876532 234566666666665543
No 266
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.4e-16 Score=158.44 Aligned_cols=213 Identities=15% Similarity=0.085 Sum_probs=145.2
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ++++.+-+.+. .+.++||+.|+.+++.++++|||+|++.++.|+++..... ..+...
T Consensus 62 gnPt~~~Le----~~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~-----~~l~~~ 127 (395)
T PRK05967 62 GTPTTDALC----KAIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCD-----TMLKRL 127 (395)
T ss_pred CChHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHH-----HHHHhc
Confidence 566666776 56667776554 4667889999999999999999999999999987642100 011123
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
|. ++..+ +.. +.+.+++++++ ++|+|++. .||++...|+++|+++|+++|+++++|+++..++ .
T Consensus 128 Gi--~v~~v--d~~----~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~ 193 (395)
T PRK05967 128 GV--EVEYY--DPE----IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y 193 (395)
T ss_pred Ce--EEEEe--CCC----CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence 33 33333 211 35778888864 78999876 6788999999999999999999999999987443 2
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALK 304 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~ 304 (471)
..|++ ++|+++.|.+|+++|.. +|+++.++ ++.+++..... ..|+.. ....+. ..++
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~---------------~~~~~l~~~~~--~~G~~~-~p~da~-l~~r 254 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE---------------KCWPQLLEAHG--TLGLCA-GPDDTY-QILR 254 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH---------------HHHHHHHHHHH--HcCCCC-CHHHHH-HHHc
Confidence 35666 79999999999987743 57665544 33333332111 112221 111222 2233
Q ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 305 QASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 305 ~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
.+. -+.-+.++..+|+..+++.|+++
T Consensus 255 gl~--Tl~lR~~~~~~na~~lA~~L~~h 280 (395)
T PRK05967 255 GLR--TMGIRLEHHRKSALEIARWLEGR 280 (395)
T ss_pred Ccc--cHHHHHHHHHHHHHHHHHHHHhC
Confidence 332 35677888899999999999986
No 267
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.76 E-value=6.2e-16 Score=157.47 Aligned_cols=312 Identities=13% Similarity=0.083 Sum_probs=184.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.. +... .+.. ..+...++ .++++++++.+. .+.+.||++|+.+++....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~---~~~~-~~~~~~~l----~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLT---SRAF-HSDQLGPW----YEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-cccc---cccc-CCHHHHHH----HHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 368999998777643 2211 1111 11222222 256777777543 4567899999999888652
Q ss_pred -----CCC-CEEEEeCCCCCCcccccccccCCccceeccce-----eEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEE
Q 012104 119 -----EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIIC 187 (471)
Q Consensus 119 -----~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~ 187 (471)
++| ++|+..+-.|.|... + .+..++.. +.....++.. -...|++++++.+. .++++|++
T Consensus 123 ~~~g~~~~r~~ii~~~~~~HG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~l~~~i~-~~~~~vii 192 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNFHGRTM-A-------AVSLSSEEEYKRGFGPMLPGIKK-IPYGDLEALKAAIT-PNTAAFLV 192 (396)
T ss_pred hccCCCCCCCEEEEECCCcCCCCH-H-------HHhhcCCcccccCCCCCCCCceE-eCCCCHHHHHHhcc-cCeEEEEE
Confidence 144 788888755533211 1 11111110 0000000000 01237899998885 36788887
Q ss_pred c--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCC-CC-CccEEEeCCCCcCCC--CCeEEEEe
Q 012104 188 G--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANP-FE-YCHIVTTTTHKSLRG--PRAGMIFY 256 (471)
Q Consensus 188 ~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p-~~-~aDiv~~s~~K~l~G--prgG~i~~ 256 (471)
+ ++++|...+ +++|+++|+++|+++++|++|. |+...|.. ... .. ..|++++ +|.+.+ .|.|++++
T Consensus 193 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~ 269 (396)
T PRK04073 193 EPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVAA 269 (396)
T ss_pred cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEEE
Confidence 7 567887776 7899999999999999999997 65333321 111 12 3577764 699654 57899998
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceE
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSL 336 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i 336 (471)
++ ++.+.+.........+++... .++..++|+.+.++ .+.++..++.++|.+.|++.+...
T Consensus 270 ~~---------------~i~~~~~~~~~~~t~~~~~~~-~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~ 330 (396)
T PRK04073 270 NR---------------DILGVFTPGSHGSTFGGNPLA-CAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPM 330 (396)
T ss_pred cH---------------HHHhhhcCCCCCCCCCCCHHH-HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCc
Confidence 87 444444332222223333333 33333466544322 344566667888888888764322
Q ss_pred eeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 337 VTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 337 ~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+.. .....++.+++.. +..++.+.|.+.||.+.+. ..+.|||+.+... ++++++++.+.|.++
T Consensus 331 i~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~~---------~~~~iRi~p~l~~----t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 331 IKEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKET---------HETVIRFAPPLVI----TKEELDWAFEKIKAV 394 (396)
T ss_pred ccceecceEEEEEEecc---hHHHHHHHHHHCCeEEecC---------CCCEEEEECCccc----CHHHHHHHHHHHHHH
Confidence 211 1123456666642 4567777888899998642 1368999976543 489999999999876
Q ss_pred H
Q 012104 416 V 416 (471)
Q Consensus 416 l 416 (471)
+
T Consensus 395 l 395 (396)
T PRK04073 395 L 395 (396)
T ss_pred h
Confidence 5
No 268
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.76 E-value=1.1e-16 Score=162.37 Aligned_cols=295 Identities=20% Similarity=0.198 Sum_probs=194.4
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEee--
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-- 159 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-- 159 (471)
+++.+++.||+++.. .++.+.|.||.++++++++|||.||+...+|-++. || +.++|. ..+++
T Consensus 75 Aqe~aA~~fgAd~ty----FvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~-~g--------lilaGa--~Pvyl~p 139 (557)
T COG1982 75 AQELAARVFGADHTY----FVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIH-HG--------LILAGA--TPVYLEP 139 (557)
T ss_pred HHHHHHHHhCCCceE----EEECCccHHHHHHHHhhcCCCCEEEecCCccHHHH-HH--------HHHcCC--ceEEecC
Confidence 568899999999853 33344457999999999999999999997776543 33 234443 33332
Q ss_pred eecCC---CCCCCHHHHHHHhhhCCC--cE-EEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCC-C
Q 012104 160 KVNSS---TGYIDYDKLEEKALDFRP--KL-IICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANP-F 232 (471)
Q Consensus 160 ~v~~~---~~~iD~~~le~~~~~~~p--kl-Ii~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p-~ 232 (471)
..|+. -+.|+.+.+++.+.+++- |+ |+++.+-+|...+.+++.+.++..++|+.+|++|.+.....+..|.+ .
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 12321 157999999998876543 44 44668889999999999999999999999999997666555555442 2
Q ss_pred -CCccEEEeCCCCcCCCCC-eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 233 -EYCHIVTTTTHKSLRGPR-AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 233 -~~aDiv~~s~~K~l~Gpr-gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
..+|+++-|+||.+++.. +.+|..++. +. --.++++.+..-...++|+...+|++.+|-..... .
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~-~~-----------~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~-~ 286 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDG-RA-----------VNHERFNEALMMHQSTSPSYPLMASLDVARMQEGN-A 286 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCC-cc-----------CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhh-h
Confidence 278999999999998875 466666542 00 12345666544445678999999999875443332 2
Q ss_pred HHHH----HHHHHHHHHHHHHHHHcC-CceEeeCCC--------------------CCeeEEEEccCCCCCHHHHHHHHh
Q 012104 311 FKAY----AKQVKANAVALGNYLTGK-GYSLVTGGT--------------------ENHLVLWDLRPLGLTGNKVEKLCD 365 (471)
Q Consensus 311 ~~~~----~~~~~~na~~l~~~L~~~-g~~i~~~~~--------------------~~~~~~v~~~~~~~~~~~~~~~L~ 365 (471)
-++. .....+.++.+++...+. +|.++..+. |.--+.+..+..|+++..+.+.|+
T Consensus 287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~ 366 (557)
T COG1982 287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLR 366 (557)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCCCCcHHHHHHHHH
Confidence 2344 344455556666666555 466654321 111234445577999999999999
Q ss_pred hcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 366 LCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 366 ~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
++||...... + ...-+=++.. . |-...++++|.++..+.
T Consensus 367 e~gii~e~~~---d----~~~lll~~~~-~---gk~~~lv~~L~~f~r~~ 405 (557)
T COG1982 367 EHGIIPEETG---D----YSNLLLFSPG-I---GKWQTLVDRLLEFKRRY 405 (557)
T ss_pred HcCCeeeecC---C----ceeeEEeeec-c---chHHHHHHHHHHHHHhh
Confidence 9999876531 1 0112222221 1 33467788888877653
No 269
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.75 E-value=2.4e-16 Score=161.15 Aligned_cols=159 Identities=18% Similarity=0.148 Sum_probs=117.5
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceecc
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATS 151 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g 151 (471)
+.....+| +++++++|.+. .+.++||+.|+.+++.++++|||+|++.++.|++..... . ..+...|
T Consensus 56 ~p~~~~le----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~--~---~~~~~~G 121 (418)
T TIGR01326 56 NPTTDVLE----QRIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF--K---HTLKRLG 121 (418)
T ss_pred ChhHHHHH----HHHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH--H---HHHHHcC
Confidence 34455565 67889999764 467889999999999999999999999998887643210 0 0011223
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAA 229 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~ 229 (471)
.+++.++. .|++++++.+.+ ++++|++. +||+|...|+++|+++|+++|+++++|++|+.+. ..
T Consensus 122 --~~v~~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~-----~~ 187 (418)
T TIGR01326 122 --IEVRFVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPY-----LC 187 (418)
T ss_pred --cEEEEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhh-----cC
Confidence 34444431 289999998864 78888865 6889999999999999999999999999997553 23
Q ss_pred CCCC-CccEEEeCCCCcCCC--CCeEEEEeeC
Q 012104 230 NPFE-YCHIVTTTTHKSLRG--PRAGMIFYRK 258 (471)
Q Consensus 230 ~p~~-~aDiv~~s~~K~l~G--prgG~i~~~~ 258 (471)
.|+. ++|++++|+||++.| .+.|+++++.
T Consensus 188 ~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CchhcCCeEEEECccccccCCccceEEEEEec
Confidence 4555 689999999999765 4556666643
No 270
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.75 E-value=1.5e-15 Score=155.01 Aligned_cols=318 Identities=16% Similarity=0.110 Sum_probs=186.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
.+|.|++++...+.. +. +.+..++ .+.... +++.++++++.+. .+.++||+.||..++..+.
T Consensus 48 ~~p~v~~a~~~~~~~-~~--~~~~~~~--~~~~~~----~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQK-LT--LTSRAFY--NDVLGL----AEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHHh-cc--ccccccc--CHHHHH----HHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 479999999887643 22 1111121 222223 3466777887653 4567899999999998663
Q ss_pred ------CCCCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecC---CCCCCCHHHHHHHhhhCCCcEEEEc
Q 012104 119 ------EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNS---STGYIDYDKLEEKALDFRPKLIICG 188 (471)
Q Consensus 119 ------~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~---~~~~iD~~~le~~~~~~~pklIi~~ 188 (471)
..+++|+..+-.|.|... + .+...+.. +.....+..+ .-...|++++++.++..++++|++.
T Consensus 114 ~~~~~~~~~~~vl~~~~~~Hg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNFSGRTI-G-------ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred hccCCCCCCCeEEEECCCcCCccH-H-------HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 135788888855533221 0 11111110 0000000000 0023489999999864568888875
Q ss_pred --CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCCCC--CccEEEeCCCCcCCC--CCeEEEEee
Q 012104 189 --GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE--YCHIVTTTTHKSLRG--PRAGMIFYR 257 (471)
Q Consensus 189 --~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p~~--~aDiv~~s~~K~l~G--prgG~i~~~ 257 (471)
+|++|...+ +++|+++|+++|+++|+|++|. |+...|.. ..... ..|++++ +|++.| ++.|+++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~-g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~~~ig~v~~~ 262 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT-GLGRTGKLLAHDHEGVKPDIVLL--GKALSGGLYPISAVLAN 262 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhHHHhcCCCCCEEEE--cccccCCCcCcEEEEEc
Confidence 678898887 8999999999999999999995 65333321 11111 3577765 499764 377899888
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC----C
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK----G 333 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~----g 333 (471)
+ ++.+.+.........+++.. ..++...+++.+.+++ +.++..+..+.+++.|++. +
T Consensus 263 ~---------------~~~~~~~~~~~~~t~~~~~~-~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~ 323 (400)
T PTZ00125 263 D---------------DVMLVIKPGEHGSTYGGNPL-ACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSP 323 (400)
T ss_pred H---------------HHHhhccCCCCCCCCCcCHH-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7 44444433222222333333 3333334565543323 3344555666666666553 3
Q ss_pred ceEeeCCCCCeeEEEEccC-CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 334 YSLVTGGTENHLVLWDLRP-LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~-~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.....+ .+.+.++.+.. .+.+...+.+.|.++||.+.+. ..+.+||+++.. .++++++++.+.|
T Consensus 324 ~~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~lRi~~~~~----~~~~~i~~~l~~l 389 (400)
T PTZ00125 324 WVKEIRG-KGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT---------HDNIIRFAPPLV----ITKEQLDQALEII 389 (400)
T ss_pred CeEEEec-ccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec---------CCCEEEEECCcc----CCHHHHHHHHHHH
Confidence 2111112 23455666643 2345566777787899998652 246899997543 3589999999999
Q ss_pred HHHHHH
Q 012104 413 HRAVTL 418 (471)
Q Consensus 413 ~~~l~~ 418 (471)
.+++..
T Consensus 390 ~~~l~~ 395 (400)
T PTZ00125 390 KKVLKS 395 (400)
T ss_pred HHHHHH
Confidence 887764
No 271
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.75 E-value=8.3e-17 Score=161.24 Aligned_cols=289 Identities=20% Similarity=0.226 Sum_probs=177.5
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ++++++.|.+. .+.+.||..|+.+++.+++++||+|++.+..|++-... .. -.+.
T Consensus 53 gnPt~~~le----~~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~--~~-----~~l~ 116 (386)
T PF01053_consen 53 GNPTVRALE----QRLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRL--LE-----ELLP 116 (386)
T ss_dssp C-HHHHHHH----HHHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHH--HH-----HCHH
T ss_pred ccccHHHHH----HHHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchhh--hh-----hhhc
Confidence 567777777 57888998865 35578999999999999999999999999888765321 00 0122
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhC-CEEEEeccccchhhcccc
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCG-ALLLCDMAHISGLVAAQE 227 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g-~~livD~a~~~glv~~g~ 227 (471)
..++++..+ | .-|++++++++++ ++++|++. .||+..+.|+++|+++|+++| +++++|.+.+.++
T Consensus 117 ~~gv~v~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~----- 184 (386)
T PF01053_consen 117 RFGVEVTFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPY----- 184 (386)
T ss_dssp HTTSEEEEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTT-----
T ss_pred ccCcEEEEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeecccccee-----
Confidence 223444443 3 2589999999975 89999976 688999999999999999999 9999999987543
Q ss_pred CCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHH
Q 012104 228 AANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVAL 303 (471)
Q Consensus 228 ~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al 303 (471)
...|+. +|||++.|.+|.+.|.. +|.++++..- ++.+++.... ...|..... ..+. ..+
T Consensus 185 ~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-------------~~~~~l~~~~--~~~G~~~~p-~da~-ll~ 247 (386)
T PF01053_consen 185 NQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-------------ELYDRLREFR--RLLGATLSP-FDAW-LLL 247 (386)
T ss_dssp TC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-------------HHHHHHHHHH--HHHT-B--H-HHHH-HHH
T ss_pred eeccCcCCceEEEeeccccccCCcceeeEEEEECchh-------------hhhhhhcchh--hhcCccchH-HHHH-HHh
Confidence 345777 79999999999998876 6888876510 3444443221 011221111 1222 123
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHcC-Cce-EeeCC---------------CCCeeEEEEccCCCCCHHHHHHHHhh
Q 012104 304 KQASTPAFKAYAKQVKANAVALGNYLTGK-GYS-LVTGG---------------TENHLVLWDLRPLGLTGNKVEKLCDL 366 (471)
Q Consensus 304 ~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~-i~~~~---------------~~~~~~~v~~~~~~~~~~~~~~~L~~ 366 (471)
+.+. -+.-+.++..+|+..+++.|+++ .+. |..++ ..+.++.+++... .+++.++++.
T Consensus 248 rgl~--Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~---~~~~~~f~~~ 322 (386)
T PF01053_consen 248 RGLR--TLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG---EEAARRFLDA 322 (386)
T ss_dssp HHHT--THHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH---HHHHHHHHHH
T ss_pred cCCC--cHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc---hhhhHhHHhh
Confidence 3333 35677888999999999999987 343 43331 1123666676531 2356666666
Q ss_pred cCeE---eccCC------cCCCC------------CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 367 CNIT---VNKNA------VFGDS------------SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 367 ~gI~---v~~~~------~p~~~------------~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..+. ++-|. .|... ....++.|||+. |+ ||.+.|.+-|.++++
T Consensus 323 l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSv------Gl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 323 LKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSV------GL--EDPDDLIADLEQALE 386 (386)
T ss_dssp -SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--------S--S-HHHHHHHHHHHHH
T ss_pred hhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEe------cc--CCHHHHHHHHHHhcC
Confidence 6654 22221 12110 011235789886 33 567777777776653
No 272
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.74 E-value=7.1e-16 Score=152.77 Aligned_cols=214 Identities=21% Similarity=0.216 Sum_probs=151.3
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| +++++|-|.+. .+.+.||..|+..++.+++++||+|++.+..||+-+.. +. .+ ..
T Consensus 61 ~nPT~~~lE----~~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~--~~----~~-l~ 124 (396)
T COG0626 61 GNPTRDALE----EALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRL--FE----KI-LQ 124 (396)
T ss_pred CCccHHHHH----HHHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHH--HH----HH-HH
Confidence 567778888 56777878775 36678999999999999999999999999888876421 00 11 11
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA 228 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~ 228 (471)
..++++..+ | .-|.+++++.+.+.++|+|++. .||+..+.|+++|+++|+++|+++++|.+.+.++ .
T Consensus 125 ~~gi~~~~~--d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~-----~ 193 (396)
T COG0626 125 KFGVEVTFV--D----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPV-----L 193 (396)
T ss_pred hcCeEEEEE--C----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccc-----c
Confidence 222344433 3 2345566666664579999975 7889999999999999999999999999987543 4
Q ss_pred CCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC--CCCCCCCcHHHHHHHHHH
Q 012104 229 ANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF--PSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 229 ~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~--~~~~g~p~~~~iaa~a~a 302 (471)
..|++ +||||+.|.+|.+.|.. +|+++++++ .+.+.+..... -|..-+| . -|. ..
T Consensus 194 q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~--------------~~~~~~~~~~~~~~G~~l~p--~--dA~-l~ 254 (396)
T COG0626 194 QRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE--------------ELYELLFFAQRANTGAVLSP--F--DAW-LL 254 (396)
T ss_pred cChhhcCCCEEEEeccccccCCcceeeeEEecChH--------------HHHHHHHHHHHhhcCCCCCH--H--HHH-HH
Confidence 56787 79999999999998864 587777764 45554422111 1211122 1 121 23
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
++-+. -+.-+.++..+|+..+++.|++.
T Consensus 255 lRGlk--TL~~Rm~~~~~nA~~IA~~L~~~ 282 (396)
T COG0626 255 LRGLR--TLALRMERHNENALKIAEFLADH 282 (396)
T ss_pred Hhccc--hHHHHHHHHHHHHHHHHHHHhcC
Confidence 44443 35677888999999999999986
No 273
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.74 E-value=1.3e-15 Score=138.55 Aligned_cols=323 Identities=15% Similarity=0.159 Sum_probs=200.0
Q ss_pred CCeeEec--CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCC-c------chhHHHHHHHHHHHHHHhcCCCCCCCceeee
Q 012104 32 RGIELIA--SENFTSFAVIEALGSALTNKYSEGMPGNRYYG-G------NEFIDEIENLCRSRALQTFHLDPTQWGVNVQ 102 (471)
Q Consensus 32 ~~i~li~--s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~-g------~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~ 102 (471)
..||+.| --..+++++++|+-. |.+||.=-.|.+ | +..+..+ .+.+++++|++. +.
T Consensus 16 ~~iNv~PiQrGGiLt~eArkal~E-----~gDGYSvCD~C~~Grldei~kPpI~~F----~~dlaeFlg~D~------~R 80 (382)
T COG1103 16 GFINVNPIQRGGILTEEARKALLE-----WGDGYSVCDFCLEGRLDEITKPPIKDF----LEDLAEFLGMDE------VR 80 (382)
T ss_pred CccccChhhccCcCCHHHHHHHHH-----hcCCcchhhhhccCccccccCCcHHHH----HHHHHHHhCCce------ee
Confidence 4566644 335679999999864 445553222221 1 1122222 234788999985 45
Q ss_pred cCChH-HHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh--
Q 012104 103 PYSGS-PANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD-- 179 (471)
Q Consensus 103 ~~sGt-~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~-- 179 (471)
++.|. .|-++++.+++++||.|++..+.| +|. |. .....|..+..++- ..-.+..|+++...+.+.+
T Consensus 81 ~t~GARe~KfavMhal~~~gd~vV~D~~aH---Ytt-yv-----AAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~ 150 (382)
T COG1103 81 VTAGAREAKFAVMHALCKEGDWVVVDSLAH---YTT-YV-----AAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVK 150 (382)
T ss_pred ecccchhhHHHHHHHhccCCCEEEEcCcch---HHH-HH-----HHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHH
Confidence 56665 799999999999999999988654 431 11 12234443333331 1123467788877766643
Q ss_pred ----CCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCC-CC
Q 012104 180 ----FRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRG-PR 250 (471)
Q Consensus 180 ----~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~G-pr 250 (471)
..|.|.++. ...||...|.+.+++||+++|++++...||..| .+|.... ++|++++|.||++.. -.
T Consensus 151 ~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~G-----rmpvs~ke~g~DFiVgSGHKsmAAs~P 225 (382)
T COG1103 151 DEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVG-----RMPVSGKEIGADFIVGSGHKSMAASAP 225 (382)
T ss_pred hccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeec-----cccccccccCCCEEEecCccchhccCC
Confidence 236666654 467999999999999999999999999999876 4454443 899999999999643 23
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhh-c--CCC-------C--CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-A--VFP-------S--LQGGPHNHQIGALAVALKQASTPAFKAYAKQV 318 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~-~--~~~-------~--~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~ 318 (471)
.|++..+.+ +.+.+-+ . .|+ | ..|.|..-.+|++-.-.+ .. +.+.+-
T Consensus 226 iGvl~~~eE---------------~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~e-----RV-krWdeE 284 (382)
T COG1103 226 IGVLAMSEE---------------WAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVE-----RV-KRWDEE 284 (382)
T ss_pred eeEEeehhH---------------HHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHH-----HH-HHHHHH
Confidence 577777663 3332211 1 011 1 234555544444432211 12 234455
Q ss_pred HHHHHHHHHHHHcCC-ceEeeCCCCCe-eEEEEccCC-------CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 319 KANAVALGNYLTGKG-YSLVTGGTENH-LVLWDLRPL-------GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 319 ~~na~~l~~~L~~~g-~~i~~~~~~~~-~~~v~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
+++++++.+.|++.| +..+.....+| ++.+..+.. .-.+..+.+.|.++||.--. || .+.++.
T Consensus 285 v~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~---~G-----~Tk~~K 356 (382)
T COG1103 285 VEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQ---PG-----QTKYFK 356 (382)
T ss_pred HHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccc---cC-----ceeEEE
Confidence 788999999999984 76654334455 333322110 00122357778888886321 22 346788
Q ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 390 IGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 390 ig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+++ .|++.++++.+++.++++++.
T Consensus 357 ~sv-----yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 357 LSV-----YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred EEe-----ecCCHHHHHHHHHHHHHHHHh
Confidence 876 688999999999999998764
No 274
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.74 E-value=1.2e-15 Score=150.74 Aligned_cols=341 Identities=13% Similarity=0.063 Sum_probs=219.9
Q ss_pred ccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCC----CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC
Q 012104 30 QCRGIELIASENFTSFAVIEALGSALTNKYSEGM----PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (471)
Q Consensus 30 ~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~----~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s 105 (471)
+.+.+++.|++..+|++|++++...+.+....|. .+.| +.++.+.++ .+++.++++|+.+.++ .+.+...|
T Consensus 2 ~~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHR---s~~F~~i~~-~~~~~Lr~Ll~~P~~y-~Vlfl~Gg 76 (364)
T PRK12462 2 HRNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHR---SSWFSSLLA-QAEADLRDLLGIPDEY-GVVFLQGG 76 (364)
T ss_pred CcccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccc---cHHHHHHHH-HHHHHHHHHhCCCCCC-eEEEEecc
Confidence 3457899999999999999999988877654443 2233 456666665 4678999999995433 36677788
Q ss_pred hHHHHHHHHHHhcCCCCEEE-EeCCCCCCcccccccccCCccceeccceeEEEee--eecCCCCCCCHHHHHHHhhhCCC
Q 012104 106 GSPANFAAYTAVLEPHDRIM-GLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY--KVNSSTGYIDYDKLEEKALDFRP 182 (471)
Q Consensus 106 Gt~A~~~~~~all~pGD~Vl-~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~--~v~~~~~~iD~~~le~~~~~~~p 182 (471)
||.++.++...|+++||+++ ... .|++++.+... +...| .++.+.. +.+ .+..+++++++ +. .+.
T Consensus 77 gT~~~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~~e----a~~~g-~v~~~~~~~~~~-~~~~p~~~~~~--~~-~d~ 144 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVT---TGYWSRKAIGE----ASRVA-AMRVVWDGAASG-YRTLPSLAELD--WD-ARA 144 (364)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEe---CCHHHHHHHHH----HHhcC-CceEecCcCCCC-CCcCCCHHHhc--cC-CCC
Confidence 99999999999999999765 444 55555433211 11122 2222221 111 12456666652 11 235
Q ss_pred cEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCC
Q 012104 183 KLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKG 259 (471)
Q Consensus 183 klIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~ 259 (471)
+.|.+. .+.+|...+ ++.+.+++++++|++..+| ..|.+++..|++.++.+|+|. |.| ++++.+++
T Consensus 145 ~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~-----s~pid~~~~dvi~agsQKnlg-P~Gltvvivs~~ 213 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFM-----SRPFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRA 213 (364)
T ss_pred cEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhh-----CCCCChHHccEEEeeccccCC-CCceEEEEECHH
Confidence 666533 566787775 3344469999999986543 234445555999999999995 877 77777764
Q ss_pred CCC-CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH--HHHHHHHHHHHHHHHHHHHHHcCC-ce
Q 012104 260 PKP-PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP--AFKAYAKQVKANAVALGNYLTGKG-YS 335 (471)
Q Consensus 260 ~~~-~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~--~~~~~~~~~~~na~~l~~~L~~~g-~~ 335 (471)
... ....-+.+ +++....++. .+..+|....+-++..+|+.+.++ +++...++..+.++.+++.+.+.. |.
T Consensus 214 al~~~~~~~p~~--ldy~~~~~~~---s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~ 288 (364)
T PRK12462 214 LLERVPDTLPPM--LDFRTHVEHR---SNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVI 288 (364)
T ss_pred HHhhccccCCch--hhHHHHHhcC---CCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 321 11111112 2343333332 123488999999999999998877 889999999999999999998873 54
Q ss_pred Eee-CCCC-Ce-eEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 336 LVT-GGTE-NH-LVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 336 i~~-~~~~-~~-~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
... .+.. +. -+.+.+.... -..++.+.++++|+.--++. . .-+++|++. ++ .+..++++.|++++
T Consensus 289 ~~~~~~~~RS~mnv~f~~~~~~-l~~~f~~~a~~~gl~~lkGh----r---~vgg~Ras~--yn--a~~~e~v~~L~~fm 356 (364)
T PRK12462 289 DCHAHRAARSTMNVAFRFRQPR-LDTLFKEQSTEAGFCGLSGH----R---SIGGIRASL--YN--AVSEQAVSRLCAFL 356 (364)
T ss_pred cCCCChhhcCcceEEEEcCCHH-HHHHHHHHHHHCCCccccCC----c---ccCceEEEc--CC--CCCHHHHHHHHHHH
Confidence 321 1111 22 2334444332 23557788889999876642 1 247899998 33 25579999999999
Q ss_pred HHH
Q 012104 413 HRA 415 (471)
Q Consensus 413 ~~~ 415 (471)
++-
T Consensus 357 ~~f 359 (364)
T PRK12462 357 KDF 359 (364)
T ss_pred HHH
Confidence 764
No 275
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.73 E-value=4.2e-15 Score=151.66 Aligned_cols=310 Identities=17% Similarity=0.140 Sum_probs=186.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
..|+|.+++...+.. +..+ + +.+ ..+...+++ +++++++|.+. .+.++||++||..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~--~-~~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLS--S-RAF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccc--c-ccc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 379999999877643 3211 1 111 123333343 56778888543 4668899999999998741
Q ss_pred -----CC-CCEEEEeCCCCCCcccccccccCCccceeccce-----e-----EEEeeeecCCCCCCCHHHHHHHhhhCCC
Q 012104 119 -----EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----F-----ESLPYKVNSSTGYIDYDKLEEKALDFRP 182 (471)
Q Consensus 119 -----~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~-----~~~~~~v~~~~~~iD~~~le~~~~~~~p 182 (471)
.+ .++|+.....|.|... + .+...+.. + .++.+ ...|++++++++++..+
T Consensus 120 ~~~~~~~~~~~i~~~~~~yhg~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~le~~l~~~~~ 185 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNFHGRTL-G-------AISMSTDPDSRTNFGPYVPGFKKI------PYNNLEALEEALEDHGP 185 (401)
T ss_pred hhcCCCCCCCEEEEECCCcCcccH-H-------HHhCcCCcccccccCCCCCCceEe------CCCCHHHHHHHHHhcCC
Confidence 23 4677878766543210 0 11121110 0 01111 13479999998865333
Q ss_pred --cEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCC-C-CC-CccEEEeCCCCcCCC--C
Q 012104 183 --KLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAAN-P-FE-YCHIVTTTTHKSLRG--P 249 (471)
Q Consensus 183 --klIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~-p-~~-~aDiv~~s~~K~l~G--p 249 (471)
..|++. .+++|...+ +++|+++|+++|+++++|++|. |+...|.... . .. ..|++++| |.+.| .
T Consensus 186 ~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~ 262 (401)
T TIGR01885 186 NVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-GLGRTGKLLCVDHENVKPDIVLLG--KALSGGVY 262 (401)
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHHhhcCCCCCEEEee--ccccCCCC
Confidence 345443 566777776 8999999999999999999995 7644443211 1 11 35777654 99865 4
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
+.|++++++ ++.+.+.........+++ ....++...+++.+.++ ...++...+.+++.+.|
T Consensus 263 ~ig~v~~~~---------------~i~~~~~~~~~~~t~~~~-p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L 323 (401)
T TIGR01885 263 PVSAVLADD---------------DVMLTIKPGEHGSTYGGN-PLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQL 323 (401)
T ss_pred CcEEEEEcH---------------HHHhhccCCCCCCCCCCC-HHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 678888876 444444332222233433 33334444566655432 34456667788999999
Q ss_pred HcCCceEee--CCCCCeeEEEEccCC--CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHH
Q 012104 330 TGKGYSLVT--GGTENHLVLWDLRPL--GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDF 405 (471)
Q Consensus 330 ~~~g~~i~~--~~~~~~~~~v~~~~~--~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~ 405 (471)
++.+..++. .+. +.+..+.+... +.+..++.+.|.++||.+.+. ..+.+||+++.. ++++++
T Consensus 324 ~~l~~~~~~~~~g~-g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~---------~~~~lRi~p~l~----~t~~~i 389 (401)
T TIGR01885 324 KKLPKPIITEVRGR-GLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT---------HGNIIRLAPPLV----ITEEQL 389 (401)
T ss_pred HhccCCceeEEeec-CeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec---------CCCEEEEeCCcc----CCHHHH
Confidence 887644432 122 22333334322 234567888888999998642 246899997533 458999
Q ss_pred HHHHHHHHHHH
Q 012104 406 EQIGEFLHRAV 416 (471)
Q Consensus 406 ~~l~~~i~~~l 416 (471)
+++.+.|.+++
T Consensus 390 ~~~l~~l~~~l 400 (401)
T TIGR01885 390 DEGLEIIKKVI 400 (401)
T ss_pred HHHHHHHHHHh
Confidence 99999998765
No 276
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=7.9e-15 Score=148.47 Aligned_cols=313 Identities=16% Similarity=0.123 Sum_probs=183.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pG 121 (471)
.+|.|.+++...+.+... .+..++ ..++....+++.+.++.+. .+.++||++|+.+++... .-+|
T Consensus 46 ~~p~v~~a~~~~~~~~~~---~~~~~~------~~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWH---VSNLFT------NSLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhccc---cccccC------CHHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 478999998887754321 111111 1233333355666665432 455789999999999854 2344
Q ss_pred -CEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCC---CCCCHHHHHHHhhhCCCcEEEEc--CCCCCc
Q 012104 122 -DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSST---GYIDYDKLEEKALDFRPKLIICG--GSAYPR 194 (471)
Q Consensus 122 -D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~---~~iD~~~le~~~~~~~pklIi~~--~s~~g~ 194 (471)
++|++.+..|.|....+ +..++.. +.....+..++. ...|++++++.+. .++++|++. .++.|.
T Consensus 112 ~~~vi~~~~~~Hg~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~ 182 (377)
T PRK02936 112 KSKIVTFEQSFHGRTFGT--------MSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGV 182 (377)
T ss_pred CCeEEEECCCcCCCcHHh--------hhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCC
Confidence 67888887664432111 1111110 000000000000 1237899999886 367777764 344443
Q ss_pred c----ccHHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcCC-CCCeEEEEeeCCCCCCCCC
Q 012104 195 D----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKG 266 (471)
Q Consensus 195 ~----~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l~-GprgG~i~~~~~~~~~~~~ 266 (471)
. -.+++|+++|+++|+++|+|++|. |+...|.... .+. ..|++ +++|++. |.|+|++++++
T Consensus 183 ~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~-------- 251 (377)
T PRK02936 183 IPADPAFLQEVQTLCKKFGALLIIDEVQT-GIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK-------- 251 (377)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH--------
Confidence 3 237899999999999999999995 7654443211 111 24665 5789974 55789998887
Q ss_pred CCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEeeC-CCCC
Q 012104 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVTG-GTEN 343 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~~-~~~~ 343 (471)
++.+.+.........++ +...+++...+++.... .++.+++.++.+++++.|++. ++..+.. ....
T Consensus 252 -------~~~~~~~~~~~~~t~~~-~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 320 (377)
T PRK02936 252 -------ELGTAFGPGSHGSTFGG-NPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKG 320 (377)
T ss_pred -------HHHhhccCCCCCCCCCC-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecc
Confidence 44444433222222333 33344444456665422 345567777778888877663 3332211 1134
Q ss_pred eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.++++++.. +...+.+.|.+.||.+.+. ..+.+||+++.. .++++++++.+.|.+++
T Consensus 321 ~~~~i~~~~---~~~~~~~~l~~~gv~v~~~---------g~~~lRi~p~~~----~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 321 LMIGIECTE---EVAPVIEQLREEGLLVLSA---------GPNVIRLLPPLV----VTKEELDQAVYLLKKVL 377 (377)
T ss_pred eEEEEEecc---hHHHHHHHHHHCCeEEecC---------CCCEEEEECCcc----cCHHHHHHHHHHHHHhC
Confidence 678888754 2566788899999998542 136899997544 34899999999887653
No 277
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.72 E-value=3.6e-16 Score=151.58 Aligned_cols=315 Identities=20% Similarity=0.156 Sum_probs=203.2
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcc-hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGN-EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHD 122 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~-~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD 122 (471)
.+.+.+++. +|.-...++|.-.|+ +...++| +..++++|.++ + +..+-|..+|...+.+|+.||.
T Consensus 157 a~~~~~~~~-----kygl~~css~~e~G~~~~hkelE----~l~A~f~g~e~----a-~vF~mGf~TNs~~~p~l~~~gs 222 (519)
T KOG1357|consen 157 AEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELE----ELVARFLGVED----A-IVFSMGFATNSMNIPSLLGKGS 222 (519)
T ss_pred ChHHHHHHH-----HhcccccccchhcccHHHHHHHH----HHHHHhcCCcc----e-EEEeccccccccCcceeecCCc
Confidence 466666664 343334444544444 4455676 45778999987 3 4466788889999999999999
Q ss_pred EEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh---------CCC--cEEEEc---
Q 012104 123 RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD---------FRP--KLIICG--- 188 (471)
Q Consensus 123 ~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~---------~~p--klIi~~--- 188 (471)
.|+...+.|.+... | +..+|...++.. +-|+..||+++++ ++| |++++.
T Consensus 223 LIiSDelNHaSi~~-G--------aRLSgAtiRVfk--------HNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi 285 (519)
T KOG1357|consen 223 LIISDELNHASLIT-G--------ARLSGATTRVFR--------HNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI 285 (519)
T ss_pred ceeeccccchheec-c--------ccccCceEEEEe--------cCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence 99999988766542 1 235565444332 3467777777753 233 455554
Q ss_pred CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc-ccCC----CCC-CCccEEEeCCCCcCCCCCeEEEEeeCCCCC
Q 012104 189 GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA-QEAA----NPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKP 262 (471)
Q Consensus 189 ~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~-g~~~----~p~-~~aDiv~~s~~K~l~GprgG~i~~~~~~~~ 262 (471)
.|.-|.+.+++++.++++++.++|+.|+||+.|.... |.-. .+- ..+||++++|.|++ |--||+|.++++
T Consensus 286 ysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk~--- 361 (519)
T KOG1357|consen 286 YSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSKE--- 361 (519)
T ss_pred eeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcHH---
Confidence 5677899999999999999999999999999887743 2211 111 15789999999987 446899998873
Q ss_pred CCCCCCCCcccchHhhhhhcC---CCCCCCCCcHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHHHHHcCCce
Q 012104 263 PKKGQPEGAVYDFEDKINFAV---FPSLQGGPHNHQIGALAVALKQAS----TPAFKAYAKQVKANAVALGNYLTGKGYS 335 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~---~~~~~g~p~~~~iaa~a~al~~~~----~~~~~~~~~~~~~na~~l~~~L~~~g~~ 335 (471)
+.+.+.... ....+-+|...++. ..+++-+. +...++..+++.+|.++++..|++.||-
T Consensus 362 ------------lid~lrt~s~~~~yat~~sppvaqq~--~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfi 427 (519)
T KOG1357|consen 362 ------------LIDYLRTPSPSALYATSLSPPVAQQI--LTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFI 427 (519)
T ss_pred ------------HHhhhccCCCceeecccCChHHHHHH--HHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEE
Confidence 333332211 11111122222211 12333332 2345788889999999999999999987
Q ss_pred EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 336 LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+. +..++..+.+-+.... .-..+.+.|.+.+|.+-....|. .|...+..|+..++.. +.++++++.+.+.++
T Consensus 428 vy-G~~dSpVvplll~~~~-k~~~f~r~~l~~nigvVvvgfPa--tpl~e~r~R~c~Sa~h----t~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 428 VY-GNNDSPVVPLLLYGPA-KIVAFSREMLERNIGVVVVGFPA--TPLLESRARFCLSASH----TKEDLDRALEVIDRV 499 (519)
T ss_pred Ee-cCCCCCcceeeecCcc-cccHHHHHHHhcCceEEEEeCCC--chHHHhHHHhhhcccc----cHHHHHHHHHHHhhh
Confidence 74 5555654433332211 12356777777788776554443 3455678898776554 478888888887764
No 278
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.71 E-value=5.3e-15 Score=143.27 Aligned_cols=307 Identities=18% Similarity=0.178 Sum_probs=203.5
Q ss_pred HHHHHHhcCCCCCCCceeeecCChHHHHHHHHH---Hh-cCC----CCEEEEeCCCCCCcccccccccCCccceecccee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT---AV-LEP----HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF 154 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~---al-l~p----GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~ 154 (471)
+++++++.|.+. +.+||.+|+++-++-++ +. -.. .+.||+++-.||-. +.+..-.++
T Consensus 115 q~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN-----------PASAam~G~ 179 (496)
T COG1003 115 QEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN-----------PASAAMAGF 179 (496)
T ss_pred HHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC-----------hhhHhhcCc
Confidence 478999999987 89999999986555444 33 222 36888888766643 334444557
Q ss_pred EEEeeeecCCCCCCCHHHHHHHhhhCCCcEE-EEcCCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC
Q 012104 155 ESLPYKVNSSTGYIDYDKLEEKALDFRPKLI-ICGGSAYPRD-WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (471)
Q Consensus 155 ~~~~~~v~~~~~~iD~~~le~~~~~~~pklI-i~~~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~ 232 (471)
+++.++.+ ++|.+|+|+|++++.+ +...+ ++++|..|.. -++.+|++|.+++|..|..|+|.-.+++. ...|-
T Consensus 180 ~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG---~~rPG 254 (496)
T COG1003 180 KVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG---LARPG 254 (496)
T ss_pred eEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhc---ccccc
Confidence 88888887 6799999999999974 55544 4567777744 47899999999999999999998655443 22344
Q ss_pred C-CccEEEeCCCCcCCCCCeE------EEEeeCCCCCCCCCC---CCCcccchHhhhh--hcCCCCCCCCCcHHHHHHHH
Q 012104 233 E-YCHIVTTTTHKSLRGPRAG------MIFYRKGPKPPKKGQ---PEGAVYDFEDKIN--FAVFPSLQGGPHNHQIGALA 300 (471)
Q Consensus 233 ~-~aDiv~~s~~K~l~GprgG------~i~~~~~~~~~~~~~---~~i~~~~l~~~i~--~~~~~~~~g~p~~~~iaa~a 300 (471)
+ ++||+-.-+||||+.|.|| =|.+++.+.+..++. .....|.+..... -++....+|+.....++..
T Consensus 255 d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~- 333 (496)
T COG1003 255 DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWA- 333 (496)
T ss_pred ccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHH-
Confidence 4 7999999999999887653 344455444433321 0000011000000 0111122344444444322
Q ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCC--CCeeEEEEcc----CCCCCHHHHHHHHhhcCeEeccC
Q 012104 301 VALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGT--ENHLVLWDLR----PLGLTGNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 301 ~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~--~~~~~~v~~~----~~~~~~~~~~~~L~~~gI~v~~~ 374 (471)
-+..+...++++..+.-+-|+.+++++|+. .|++...+. ..|-+++|.+ ..|++..++.++|-+.|+..-.-
T Consensus 334 -YI~~mG~~GL~~ase~AvLNANYia~rL~~-~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~ 411 (496)
T COG1003 334 -YIRMMGADGLKQASEVAVLNANYIARRLKG-YYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTM 411 (496)
T ss_pred -HHHHHhHHHHHHHHHHHHHhHHHHHHHhhh-cCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcc
Confidence 233444567888888888999999999987 566654444 4677788876 35889999999999999987665
Q ss_pred CcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH
Q 012104 375 AVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL 420 (471)
Q Consensus 375 ~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~ 420 (471)
++|- .+.+.+-|=. |..-+.++++++++++..+.....
T Consensus 412 ~FPl----iV~~tLMIEP----TEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 412 YFPL----IVAGTLMIEP----TESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred cCcc----ccccceeecC----CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5542 1234455432 223457899999999988877654
No 279
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.71 E-value=2.2e-16 Score=140.47 Aligned_cols=163 Identities=23% Similarity=0.229 Sum_probs=114.6
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
++++++++|+.+.+ + +.+ +++|+.|+.+++.++.++|++|++.++.|+++... .....| .+++.++.
T Consensus 5 ~~~~l~~~~~~~~~-~-~~~-~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------~~~~~g--~~~~~v~~ 71 (170)
T cd01494 5 LEEKLARLLQPGND-K-AVF-VPSGTGANEAALLALLGPGDEVIVDANGHGSRYWV--------AAELAG--AKPVPVPV 71 (170)
T ss_pred HHHHHHHHcCCCCC-c-EEE-eCCcHHHHHHHHHHhCCCCCEEEEeecccceehhh--------HHHhcC--CEEEEecc
Confidence 34788899953332 2 444 45889999999999999999999999998877520 112334 34445554
Q ss_pred cCCC-CCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEE
Q 012104 162 NSST-GYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIV 238 (471)
Q Consensus 162 ~~~~-~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv 238 (471)
+..+ ...|.+.+++.....+|+++++. .++.|...|.++|+++|+++|+++++|++|..+....+....+..++|++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~ 151 (170)
T cd01494 72 DDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVV 151 (170)
T ss_pred CCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEE
Confidence 4322 22233366665555678888765 55778888999999999999999999999985544321111122379999
Q ss_pred EeCCCCcCCCCCeEEEEee
Q 012104 239 TTTTHKSLRGPRAGMIFYR 257 (471)
Q Consensus 239 ~~s~~K~l~GprgG~i~~~ 257 (471)
+.|+||++.+|++|+++++
T Consensus 152 ~~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 152 TFSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEEcccccCCCceEEEEeC
Confidence 9999999988999999864
No 280
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.71 E-value=3.5e-15 Score=143.29 Aligned_cols=265 Identities=16% Similarity=0.164 Sum_probs=173.8
Q ss_pred eeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccce-eccceeEEEeeeecC-CCCCCCHHHHHHHh
Q 012104 100 NVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS-ATSIYFESLPYKVNS-STGYIDYDKLEEKA 177 (471)
Q Consensus 100 ~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~-~~g~~~~~~~~~v~~-~~~~iD~~~le~~~ 177 (471)
+|.+.++|.||.++...|..|||.-|++.|.|+|+--+ +. ..| ++++++.... .++.|+.+++|++.
T Consensus 149 ~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrd---------l~~rTg--veivpv~c~Ss~~f~itv~alE~A~ 217 (471)
T KOG0256|consen 149 VVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRD---------LRWRTG--VEIVPVHCSSSNGFQITVEALEAAL 217 (471)
T ss_pred eEEecccchhhHHHHHHhcCCCceeeecCCCCCccccc---------ceeccC--ceEEEEEeecCCCccccHHHHHHHH
Confidence 45566778899999999999999999999999987432 21 234 5777776654 45799999999887
Q ss_pred hh-----CCCc-EEEEc-CCCCCccccHHHHH---HHHHHhCCEEEEeccccchhhcccc-CCCCCC-------Ccc--E
Q 012104 178 LD-----FRPK-LIICG-GSAYPRDWDYARFR---AVADKCGALLLCDMAHISGLVAAQE-AANPFE-------YCH--I 237 (471)
Q Consensus 178 ~~-----~~pk-lIi~~-~s~~g~~~d~~~i~---~ia~~~g~~livD~a~~~glv~~g~-~~~p~~-------~aD--i 237 (471)
.+ .+.| +|+++ +||.|...+-+++. +.|.++++.+|+|+.|+ |-++... ..+-+. ..| -
T Consensus 218 ~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya-~sVF~~~~F~Sv~ev~~~~~~~~~rvH 296 (471)
T KOG0256|consen 218 NQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA-GSVFDKSEFRSVLEVRKDPHLDPDRVH 296 (471)
T ss_pred HHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc-ccccCccCceEHHHHhhccccCCCcEE
Confidence 53 2344 66677 78999999877665 66789999999999997 6565432 111111 112 3
Q ss_pred EEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHH
Q 012104 238 VTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (471)
Q Consensus 238 v~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~ 315 (471)
++-|++|- |+|.|-|.|.+.++ +......+...-+.. ++..+.+++...+=++..+..+.+..
T Consensus 297 ivyslSKD~GlpGfRvGviYS~ne--------------~VvsaA~kmssf~~v-Ss~tQ~~la~LLSD~~f~~~yl~en~ 361 (471)
T KOG0256|consen 297 IVYSLSKDFGLPGFRVGVIYSNNE--------------DVVSAATKMSSFGLV-SSQTQYLLASLLSDEEFTREYLRENN 361 (471)
T ss_pred EEEEeccccCCCceEEEEEEecCh--------------HHHHHHHHHhhccCC-cHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 56788998 78889999988775 444333332111211 22222222221122222222235556
Q ss_pred HHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCC---C-CCHH-H-HHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 316 KQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPL---G-LTGN-K-VEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 316 ~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~---~-~~~~-~-~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
+++....+++.+.|+++|+..+.. ..+.++|+|++.. . ..++ + ..+.+++.++-++||+-+ ....++++|
T Consensus 362 ~Rl~~rh~~~~~gLk~lgI~cl~s-~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~---~C~EpGWFR 437 (471)
T KOG0256|consen 362 KRLRIRHRYIVEGLKALGIPCLKS-NAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSC---HCHEPGWFR 437 (471)
T ss_pred HHHHHHHHHHHhhHHhcCCceeec-CCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcc---eecCCCeEE
Confidence 677777888999999999998754 4567889998642 1 1222 1 367778889999887533 122468999
Q ss_pred EecCCC
Q 012104 390 IGTPAM 395 (471)
Q Consensus 390 ig~~~~ 395 (471)
+.+..+
T Consensus 438 vcFAn~ 443 (471)
T KOG0256|consen 438 VCFANM 443 (471)
T ss_pred EEeccC
Confidence 998543
No 281
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=2e-14 Score=146.41 Aligned_cols=312 Identities=15% Similarity=0.114 Sum_probs=180.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCC--
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH-- 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pG-- 121 (471)
.|.+.+++...+.... +....| . .+.... ..++++++++.+. .+.+.||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~~---~~~~~~-~-~~~~~~----la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKLI---HTSNLY-Y-IEPQEE----LAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhcc---cccccc-C-CHHHHH----HHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 4889988877764321 111111 1 222222 2366777777653 3557889999999998775444
Q ss_pred -----CEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCC----CCCCHHHHHHHhhhCCCcEEEEc--C
Q 012104 122 -----DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSST----GYIDYDKLEEKALDFRPKLIICG--G 189 (471)
Q Consensus 122 -----D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~----~~iD~~~le~~~~~~~pklIi~~--~ 189 (471)
++|++.++.|.|.... .+...+.. +.....++. .+ ...|++++++.+. .++++|++. +
T Consensus 123 ~~~~~~~ii~~~~~yhg~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~ 192 (396)
T PRK02627 123 KGIEKPEIITAENSFHGRTLA--------TLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ 192 (396)
T ss_pred cCCCCCeEEEECCCcCcccHH--------HHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence 6788888777543210 01111110 000000111 11 1238999999885 478888865 4
Q ss_pred CCCC-ccc---cHHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcCC-CCCeEEEEeeCCCC
Q 012104 190 SAYP-RDW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPK 261 (471)
Q Consensus 190 s~~g-~~~---d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l~-GprgG~i~~~~~~~ 261 (471)
+++| ... .+++|+++|+++|++||+|++|. |+...|.... .+. ..|+++ ++|.+. |.|.|++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~--- 266 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIMT--LAKGLGGGVPIGAVLAKE--- 266 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEEE--EcchhhCCcccEEEEEcH---
Confidence 4555 333 36889999999999999999997 6644442211 111 346654 679974 56889999886
Q ss_pred CCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC--ceEee-
Q 012104 262 PPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--YSLVT- 338 (471)
Q Consensus 262 ~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g--~~i~~- 338 (471)
++.+.+.........++ +....++...+++.... .++.+++.++.+.+++.|.+.. +..+.
T Consensus 267 ------------~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 330 (396)
T PRK02627 267 ------------KVADVFTPGDHGSTFGG-NPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKE 330 (396)
T ss_pred ------------HHHhccCCCCCCCCCCC-CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeee
Confidence 44444433212222233 23333344445554322 2345566666666666665431 21111
Q ss_pred CCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 339 GGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 339 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
......++++.+. .+..++.+.|.+.||.+.+. ..+.+||+++.. .++++++++.+.|.++++
T Consensus 331 ~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~---------~~~~lRi~~~~~----~~~~~i~~~~~~l~~~l~ 393 (396)
T PRK02627 331 VRGLGLMIGIELD---RPAAEIVKKALEKGLLINVT---------GDNVLRLLPPLI----ISKEEIDEAVDRLEEVLK 393 (396)
T ss_pred eccCcEEEEEEec---CcHHHHHHHHHHCCeEEeec---------CCCEEEEECCcc----cCHHHHHHHHHHHHHHHH
Confidence 1112446777762 25677877777789999753 136799986533 348999999999988775
No 282
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.69 E-value=6.4e-15 Score=147.82 Aligned_cols=251 Identities=19% Similarity=0.156 Sum_probs=160.7
Q ss_pred chhHHHHHHHHHHHHHHhcCCCCCCC----ceeeecCChHHHHHHHHHHhc--------CCC-----C-EEEEeCCCCCC
Q 012104 72 NEFIDEIENLCRSRALQTFHLDPTQW----GVNVQPYSGSPANFAAYTAVL--------EPH-----D-RIMGLDLPSGG 133 (471)
Q Consensus 72 ~~~~~~lE~~~~~~~~~lfg~~~~~~----~~~v~~~sGt~A~~~~~~all--------~pG-----D-~Vl~~~~~~~g 133 (471)
.....++|..+.+++++++|.+.+.. +.-+.+++||.||+.++.+.- ..| . .|++.+ .+
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~---~a 150 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE---QA 150 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET---TS
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc---cc
Confidence 35677899999999999999982110 145667889999988775531 112 2 344444 33
Q ss_pred cccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC--C---CcEEE--EcCCCCCccccHHHHHHHHH
Q 012104 134 HLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF--R---PKLII--CGGSAYPRDWDYARFRAVAD 206 (471)
Q Consensus 134 ~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~--~---pklIi--~~~s~~g~~~d~~~i~~ia~ 206 (471)
|+|.. +.+...|.+ ++.++++ +++.+|+++|++++.+. + |-+|+ +|.+.+|.+-|+++|++||+
T Consensus 151 H~S~~------Kaa~~lGlg--~~~I~~~-~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~ 221 (373)
T PF00282_consen 151 HYSIE------KAARILGLG--VRKIPTD-EDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICE 221 (373)
T ss_dssp -THHH------HHHHHTTSE--EEEE-BB-TTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHH
T ss_pred ccHHH------HhcceeeeE--EEEecCC-cchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcc
Confidence 44321 234456665 5556667 46899999999988642 2 43444 34778999999999999999
Q ss_pred HhCCEEEEeccccchhhccccC---CCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHhhh---
Q 012104 207 KCGALLLCDMAHISGLVAAQEA---ANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKI--- 279 (471)
Q Consensus 207 ~~g~~livD~a~~~glv~~g~~---~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~~i--- 279 (471)
++++|++||+|++..+...... ..-++.+|-++.++||++..|-+ |+++++++. .+...+
T Consensus 222 ~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~-------------~l~~~~~~~ 288 (373)
T PF00282_consen 222 KYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKS-------------DLRDAFSIN 288 (373)
T ss_dssp HCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGG-------------GHHGGGEEE
T ss_pred ccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeeccc-------------chHHHhccC
Confidence 9999999999997322222111 12234799999999999888864 888888741 111111
Q ss_pred ----h----------hcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCe
Q 012104 280 ----N----------FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENH 344 (471)
Q Consensus 280 ----~----------~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~ 344 (471)
. .....+.+++- -...+.+..+++....+++.+.+++..+++++|++.|++. +++++.. ....
T Consensus 289 ~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~-~~~~ 366 (373)
T PF00282_consen 289 ADYLGNDDRESDESYDYGDYTLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNE-PDLN 366 (373)
T ss_dssp ETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESST-TSSS
T ss_pred hhhhcccccccccccccccccccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcC-CCce
Confidence 0 00011233443 2334455567777777889999999999999999999988 5888653 3333
Q ss_pred eEEEE
Q 012104 345 LVLWD 349 (471)
Q Consensus 345 ~~~v~ 349 (471)
++++.
T Consensus 367 ~vcFr 371 (373)
T PF00282_consen 367 IVCFR 371 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44443
No 283
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=1.7e-14 Score=158.20 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=178.1
Q ss_pred HHHHHHHhcCCCCCCCceeee-cCChHHHHHHHHHHh-cCCC--CEEEEeCCCCCCcccccccccCCccceeccceeEEE
Q 012104 82 CRSRALQTFHLDPTQWGVNVQ-PYSGSPANFAAYTAV-LEPH--DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~-~~sGt~A~~~~~~al-l~pG--D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~ 157 (471)
.+..+++|.|++.+ |+. ..++|.+..+++.++ +++| |+|++.+..|++.+.-. .-...+.+++++
T Consensus 153 ~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~-------~t~a~~~GieV~ 221 (993)
T PLN02414 153 YQTMITDLTGLPMS----NASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVC-------QTRADGLGLEVV 221 (993)
T ss_pred HHHHHHHHhCCChh----hEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHH-------HHhhhhcCCEEE
Confidence 56789999999974 333 345666777777776 5655 88999998887654211 001122334444
Q ss_pred eeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH 236 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD 236 (471)
.++++. .| ...+.-..+++..+|.+|.+.|+++|.++|+++|+++++ .++..++.. ...|-+ +||
T Consensus 222 ~v~~~~----~~------~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~---l~~pge~GAD 287 (993)
T PLN02414 222 VADEKD----FD------YSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTM---LKPPGEWGAD 287 (993)
T ss_pred Eecchh----hc------cccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcC---CCCHhhccCc
Confidence 443321 11 011111123333467799999999999999999999999 777665532 222333 899
Q ss_pred EEEeCCCCcC-----CCCCeEEEEeeCCCCCCCCC---CCCC-----cccch--HhhhhhcCCCCCCCCCcHH----HHH
Q 012104 237 IVTTTTHKSL-----RGPRAGMIFYRKGPKPPKKG---QPEG-----AVYDF--EDKINFAVFPSLQGGPHNH----QIG 297 (471)
Q Consensus 237 iv~~s~~K~l-----~GprgG~i~~~~~~~~~~~~---~~~i-----~~~~l--~~~i~~~~~~~~~g~p~~~----~ia 297 (471)
|++++.|||+ +||+.|++.+++++....++ |-.. ..|.+ ..+-+...+ ..++.+.- ..+
T Consensus 288 i~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRr--EkaTsNict~qaL~A 365 (993)
T PLN02414 288 IVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRR--DKATSNICTAQALLA 365 (993)
T ss_pred EEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhh--cccccchhHHHHHHH
Confidence 9999999997 78888999998764221110 1000 00000 000000001 12333432 222
Q ss_pred HHHHH-HHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCc
Q 012104 298 ALAVA-LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV 376 (471)
Q Consensus 298 a~a~a-l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~ 376 (471)
+++.. +..+...++++..+++..++.++++.|.+.|+++... .....+.+.+. +..++.+.|.++||.++...
T Consensus 366 ~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~-~~f~~vt~~~~----~~~~v~~~L~~~gI~l~~~~- 439 (993)
T PLN02414 366 NMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSL-PFFDTVKVKCS----DADAIADAAAKVGINLRVVD- 439 (993)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCC-CCcCeEEEecC----CHHHHHHHHHHCCCeeEEec-
Confidence 33222 2233345788889999999999999998889888543 22234555542 45778899999999776421
Q ss_pred CCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 377 FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 377 p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.+.+|+++...++ ++|++++++++..
T Consensus 440 --------~~~lrvs~~e~~T----~edId~L~~~l~~ 465 (993)
T PLN02414 440 --------ANTVTVSFDETTT----LEDVDKLFKVFAG 465 (993)
T ss_pred --------CCeEEEEeeccCC----HHHHHHHHHHHcc
Confidence 2569999877765 8999999999964
No 284
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.68 E-value=5.5e-14 Score=136.22 Aligned_cols=288 Identities=13% Similarity=0.129 Sum_probs=181.0
Q ss_pred CCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHH
Q 012104 94 PTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKL 173 (471)
Q Consensus 94 ~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~l 173 (471)
...|++ +.+++.|.++..++..++++||.|++...+|.+-++ .+...| +.+++++.| ...+|+|.|
T Consensus 122 ~~~wdi-iit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~---------s~~a~g--v~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNWDI-IITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQ---------SMEALG--VKIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCCceE-EEecCCchHHHHHHHHhhcCCCceEEecccchHHHH---------hccccC--ceEEecccc--CCCCCHHHH
Confidence 355743 334444679999999999999999999988876553 223344 566666554 467999999
Q ss_pred HHHhhh--------CCCcEEEE---cCCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhcc---c----------
Q 012104 174 EEKALD--------FRPKLIIC---GGSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAA---Q---------- 226 (471)
Q Consensus 174 e~~~~~--------~~pklIi~---~~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~---g---------- 226 (471)
++.+.. .+|++.++ ++||+|..++.+ +|.+||++|+.+|++|+.|. -|-+. +
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy-~Lq~~~y~~~~~~~~p~~s 266 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY-FLQMNTYNPSLELESPAHS 266 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccc-eeeccccCCCccccCcccc
Confidence 998853 34788884 589999998874 77899999999999999985 12111 0
Q ss_pred -------cCCCCCC-Ccc---EEEeCCCCcC-CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHH
Q 012104 227 -------EAANPFE-YCH---IVTTTTHKSL-RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNH 294 (471)
Q Consensus 227 -------~~~~p~~-~aD---iv~~s~~K~l-~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~ 294 (471)
..|+.+. ..| |-..||+|-+ +|.|-||+.+++. -+...++.+-... + +|+..
T Consensus 267 ~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~--------------~l~ril~~ae~~t-~-~pSg~ 330 (472)
T KOG0634|consen 267 SSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL--------------FLKRILDLAEVAT-S-GPSGF 330 (472)
T ss_pred HHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH--------------HHHHHhhhcceee-c-Ccccc
Confidence 1222222 112 5578999984 7889999999873 2333344332221 2 23322
Q ss_pred HHHHHHHHHHHhccHHHHHHHHHH----HHHHHHHHHHHHcC---C-ceEeeCCCCCeeEEEEcc------CCCCC-HH-
Q 012104 295 QIGALAVALKQASTPAFKAYAKQV----KANAVALGNYLTGK---G-YSLVTGGTENHLVLWDLR------PLGLT-GN- 358 (471)
Q Consensus 295 ~iaa~a~al~~~~~~~~~~~~~~~----~~na~~l~~~L~~~---g-~~i~~~~~~~~~~~v~~~------~~~~~-~~- 358 (471)
...-+...|+...+++|-++.+++ -.++..+..+|.+. + +.+. .+..+.++||.+. +++++ -+
T Consensus 331 sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~-~P~aGmFiwv~i~~~~~~~~~~i~q~~e 409 (472)
T KOG0634|consen 331 SQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYH-PPKAGMFIWVEIPYINFDTKKSINQIEE 409 (472)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEe-cCCcceEEEEEecccccccccchHHHHH
Confidence 222233345555555554444433 33445566666553 4 4554 5678889999874 23444 22
Q ss_pred HHHHHHhhcCeEeccCCcCCCC-CCC-CCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 359 KVEKLCDLCNITVNKNAVFGDS-SAL-APGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 359 ~~~~~L~~~gI~v~~~~~p~~~-~~~-~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+...+.+.||.+-.|..+... ... ..-.+|++.+.+. .+++++-.+.+..++++
T Consensus 410 ~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~-----~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 410 IIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAE-----PEKLDEGIERFGSVIKE 466 (472)
T ss_pred HHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCC-----HHHHHHHHHHHHHHHHH
Confidence 2467778999999888755322 111 2238999985542 45666666666666554
No 285
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.68 E-value=4.3e-14 Score=144.33 Aligned_cols=311 Identities=15% Similarity=0.099 Sum_probs=183.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---c-
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---L- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---l- 118 (471)
-.|+|.+++...+.+....+. ....+...++ .++++++++.+. ....+||++||.+++... .
T Consensus 57 ~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~~~l----~~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHISN-----VFTNEPALRL----AKKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCcccC-----ccCCHHHHHH----HHHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 479999999887754321111 1122222223 356667776543 356789999999998754 1
Q ss_pred ----CCCCEEEEeCCCCCCcccccccccCCccceeccc-----ee-----EEEeeeecCCCCCCCHHHHHHHhhhCCCcE
Q 012104 119 ----EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-----YF-----ESLPYKVNSSTGYIDYDKLEEKALDFRPKL 184 (471)
Q Consensus 119 ----~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-----~~-----~~~~~~v~~~~~~iD~~~le~~~~~~~pkl 184 (471)
...++|+..+-.|.|... + .++..+. .+ .++.+ ...|++++++.+. .++++
T Consensus 123 ~~~~~~~~~ii~~~~~~HG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~~l~~~l~-~~~aa 187 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSFHGRTL-F-------TVSVGGQPKYSDGFGPKPADITHV------PFNDLAAVKAVID-DHTCA 187 (403)
T ss_pred hcCCCCCCeEEEEcCCcCCchh-h-------hHhhcCChhhhhcCCCCCCCcEEe------CCCCHHHHHHHhc-CCeEE
Confidence 124577777755433211 0 0111110 00 01111 1238999999885 46887
Q ss_pred EEEc-CCCCCccc--c---HHHHHHHHHHhCCEEEEeccccchhhccccCCCC--CC-CccEEEeCCCCcC-CCCCeEEE
Q 012104 185 IICG-GSAYPRDW--D---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--FE-YCHIVTTTTHKSL-RGPRAGMI 254 (471)
Q Consensus 185 Ii~~-~s~~g~~~--d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p--~~-~aDiv~~s~~K~l-~GprgG~i 254 (471)
|++. .++.|... + +++|+++|++||+++|+|++|. |+...|..... .. ..|++ |++|++ +|.|.|++
T Consensus 188 iiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--s~sK~l~~G~rig~v 264 (403)
T PRK05093 188 VVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPIGAM 264 (403)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCEE--EecccccCCcceEEE
Confidence 7766 34444332 2 7899999999999999999998 76555532211 11 24554 667996 57789999
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCc
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGY 334 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~ 334 (471)
++++ ++.+.+.........+++... .++...+++.+.. .++.+++.++.+++.+.|++.+.
T Consensus 265 v~~~---------------~i~~~l~~~~~~~t~~~~~~~-~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 325 (403)
T PRK05093 265 LTTA---------------EIASHFKVGTHGSTYGGNPLA-CAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQ 325 (403)
T ss_pred EEcH---------------HHHhhcCCCCCCCCCCCCHHH-HHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh
Confidence 9987 444444432222233333333 3344445655432 24556777788888888887532
Q ss_pred --eEee-CCCCCeeEEEEccCCC-CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHH
Q 012104 335 --SLVT-GGTENHLVLWDLRPLG-LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGE 410 (471)
Q Consensus 335 --~i~~-~~~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~ 410 (471)
.++. ......++++.+.+.. -+..++...|.+.||.+.+. ..+.+||+.+... ++++++++.+
T Consensus 326 ~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------g~~~lRl~~~~~~----~~~~i~~~~~ 392 (403)
T PRK05093 326 KYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA---------GPDVLRFAPSLVI----EEADIDEGLA 392 (403)
T ss_pred hCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC---------CCCEEEEeCCCCC----CHHHHHHHHH
Confidence 2211 1122446677764321 13456777777889998642 1368999875543 4789999999
Q ss_pred HHHHHHH
Q 012104 411 FLHRAVT 417 (471)
Q Consensus 411 ~i~~~l~ 417 (471)
.|.+++.
T Consensus 393 ~l~~~l~ 399 (403)
T PRK05093 393 RFEKAVA 399 (403)
T ss_pred HHHHHHH
Confidence 9888774
No 286
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.67 E-value=5.2e-14 Score=143.32 Aligned_cols=316 Identities=17% Similarity=0.153 Sum_probs=181.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+-+..+ ..+ ..+...++ .++++++++.+. ...++||++||.+++....
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~---~~~--~~~~~~~l----a~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~ 117 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIG---NGY--TNEPVLRL----AKKLVDATFADK-----VFFCNSGAEANEAALKLARRYAL 117 (397)
T ss_pred CCHHHHHHHHHHHHhccccc---Ccc--CCHHHHHH----HHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 37999999988775432111 111 12222233 356777777543 3567899999999998651
Q ss_pred ----CCCCEEEEeCCCCCCcccccccccCCccceeccce-----eEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-
Q 012104 119 ----EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG- 188 (471)
Q Consensus 119 ----~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~- 188 (471)
...++|+..+-.|.|... + .++..+.. +....-++. .-...|++++++++. .++++|++.
T Consensus 118 ~~~~~~r~~ii~~~~~yHG~~~-~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~aavi~Ep 187 (397)
T TIGR03246 118 DKHGADKSEIVAFKNSFHGRTL-F-------TVSVGGQPKYSQGFAPLPGGIK-HAPYNDLAAAKALIS-DKTCAVIVEP 187 (397)
T ss_pred hcCCCCCCEEEEECCCcCCccH-H-------HHHhcCCcccccCCCCCCCceE-EeCCCCHHHHHHHhc-cCeEEEEEec
Confidence 123677777754433210 1 11111110 000000000 001348999999886 367777766
Q ss_pred -CCCCCcc----ccHHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcC-CCCCeEEEEeeCC
Q 012104 189 -GSAYPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSL-RGPRAGMIFYRKG 259 (471)
Q Consensus 189 -~s~~g~~----~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l-~GprgG~i~~~~~ 259 (471)
+++.|.. -.+++|+++|+++|+++|+|++| .|+-..|.... .+. ..|++ +++|.+ .|.+.|++++++
T Consensus 188 i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~- 263 (397)
T TIGR03246 188 IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTT- 263 (397)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcH-
Confidence 3334432 23789999999999999999999 47733333211 111 35776 467998 566778888887
Q ss_pred CCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC--ceEe
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--YSLV 337 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g--~~i~ 337 (471)
++.+.+.......+.++.. ...++..++++.... .+..+++.++.++|.+.|++.+ +.++
T Consensus 264 --------------~i~~~~~~~~~~~t~~~~p-~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~ 325 (397)
T TIGR03246 264 --------------EIAAHLKVGTHGTTYGGNP-LACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVF 325 (397)
T ss_pred --------------HHHHhccCCCcCCCCCCCH-HHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 4444443322222233322 333343445655432 3466777788888888887754 2222
Q ss_pred e--CCCCCeeEEEEccCC-CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 338 T--GGTENHLVLWDLRPL-GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 338 ~--~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
. .+. ..++.+.+.+. ......+.+.|.+.||.+.+. .++.+|+..+.. .+++|++++.+.|.+
T Consensus 326 ~~vrg~-G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~~lR~~p~~~----~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 326 SEIRGK-GLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------GPNVVRFAPSLV----ISDDDIDEGLARFER 391 (397)
T ss_pred EeeecC-ceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CCHHHHHHHHHHHHH
Confidence 1 122 23334444321 113456777888899998642 136899986544 458999999999988
Q ss_pred HHHH
Q 012104 415 AVTL 418 (471)
Q Consensus 415 ~l~~ 418 (471)
++..
T Consensus 392 ~l~~ 395 (397)
T TIGR03246 392 AIEQ 395 (397)
T ss_pred HHHH
Confidence 7753
No 287
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.67 E-value=1.1e-16 Score=154.65 Aligned_cols=252 Identities=19% Similarity=0.191 Sum_probs=156.9
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc
Q 012104 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL 118 (471)
Q Consensus 39 s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all 118 (471)
|+| .+|+++++|.... . |. .-|++.++...+| ++++++||.+. .+.++|||.||.+++++++
T Consensus 4 SD~-~~~~m~~a~~~a~-~----gd---~~Yg~D~~~~~l~----~~i~~l~g~e~-----a~f~~sGT~An~~al~~~~ 65 (290)
T PF01212_consen 4 SDT-PTPAMLEAMAAAN-V----GD---DAYGEDPTTARLE----ERIAELFGKEA-----ALFVPSGTMANQLALRAHL 65 (290)
T ss_dssp -SS-S-HHEEHHHHHTT-S----B----CCTTSSHHHHHHH----HHHHHHHTSSE-----EEEESSHHHHHHHHHHHHH
T ss_pred ccC-CCHHHHHHHHccc-c----CC---cccCCChhHHHHH----HHHHHHcCCCE-----EEEeCCCChHHHHHHHHHH
Confidence 666 8899999995432 1 11 1366777888777 67889999886 3567899999999999999
Q ss_pred CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhh-----CCCcEEEEc-CCCC
Q 012104 119 EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALD-----FRPKLIICG-GSAY 192 (471)
Q Consensus 119 ~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~-----~~pklIi~~-~s~~ 192 (471)
+|++.|++.+.. |+. ..+.|....+.|. ++++++.+ +.+.+|+++|++.+.. .+|++|++. .+.+
T Consensus 66 ~~~~~vi~~~~a---Hi~---~~E~ga~~~~~G~--~~~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 66 RPGESVICADTA---HIH---FDETGAIEELSGA--KLIPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp HTTEEEEEETTE---HHH---HSSTTHHHHHTTC--EEEEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred hcCCceeccccc---eee---eeccchhhHhcCc--EEEECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 999999998863 331 1122222223443 44555433 3389999999999986 457888765 5555
Q ss_pred --CccccHHHH---HHHHHHhCCEEEEeccccchhh-ccccCCCCC-CCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCC
Q 012104 193 --PRDWDYARF---RAVADKCGALLLCDMAHISGLV-AAQEAANPF-EYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKK 265 (471)
Q Consensus 193 --g~~~d~~~i---~~ia~~~g~~livD~a~~~glv-~~g~~~~p~-~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~ 265 (471)
|.++++++| .++|+++|++++.|+|...... +.+..+..+ .++|++++|++|.+..|-|++++.+++
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~------ 210 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKE------ 210 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHH------
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechH------
Confidence 888876654 5789999999999999653322 112222122 389999999999988888999998873
Q ss_pred CCCCCcccchHhhhhhcCCCCCCCCCcHH---HHHH----HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 266 GQPEGAVYDFEDKINFAVFPSLQGGPHNH---QIGA----LAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 266 ~~~~i~~~~l~~~i~~~~~~~~~g~p~~~---~iaa----~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
.+.+....... .|+ .+. .+++ ...++.. .+.+ .....+..++++.|++.|+..|+.+.
T Consensus 211 --------~i~~~~~~~k~---~gg-~~~~~G~~~a~~~~~~~~l~~-l~~~-~~~~~~~~~~A~~La~~l~~~~~~~~ 275 (290)
T PF01212_consen 211 --------FIAKARRQRKR---LGG-GMRQAGVLAAAELYQFAALRA-LELW-LERARHANAMAKRLAAGLEALGGVLP 275 (290)
T ss_dssp --------HHHHHHHHHHH---HTH-HHHHTTHHHHHHHHHHHHHCH-EECS-HHHHHCHHHHHHCHHHCHHEECEEEE
T ss_pred --------HHHHHHHHHHH---hcc-CeeecceeeeechhhHHHHHH-HHhh-HHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 12221111100 011 111 1122 0112221 2212 45667778889999999999888764
No 288
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.66 E-value=5.8e-14 Score=143.37 Aligned_cols=316 Identities=18% Similarity=0.141 Sum_probs=185.6
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.|.+|+...+.+-+..+ ..+. .+...++ .++++++++.+. .+.+.||++|+..++....
T Consensus 57 ~p~v~~A~~~~~~~~~~~~---~~~~--~~~~~~l----a~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~~ 122 (406)
T PRK12381 57 HPALREALNEQASKFWHTG---NGYT--NEPVLRL----AKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAHD 122 (406)
T ss_pred CHHHHHHHHHHHhhccccc---CccC--CHHHHHH----HHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHhh
Confidence 7899999888775422111 1111 1222222 356777776543 4667899999999988641
Q ss_pred ---CCCCEEEEeCCCCCCcccccccccCCccceeccce-eE----EEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-C
Q 012104 119 ---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FE----SLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG-G 189 (471)
Q Consensus 119 ---~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~----~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~ 189 (471)
.+..+|+..+..|.|... + .+...+.. +. ..+-++. .-...|++++++.+. .++++|++. .
T Consensus 123 ~~~~~r~~ii~~~~~yHG~t~-~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~-~~~aaviiEPv 192 (406)
T PRK12381 123 RYGSHKSGIVAFKNAFHGRTL-F-------TVSAGGQPKYSQDFAPLPPDIR-HAAYNDLNSASALID-DQTCAVIVEPI 192 (406)
T ss_pred cCCCCCCeEEEECCCcCCcch-h-------HHhhcCCcccccCCCCCCCCee-EeCCCCHHHHHHhcc-CCeeEEEEeCC
Confidence 245789998877654321 1 11222210 00 0000000 012458999999886 367777766 3
Q ss_pred CCCCc-----cccHHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcC-CCCCeEEEEeeCCC
Q 012104 190 SAYPR-----DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSL-RGPRAGMIFYRKGP 260 (471)
Q Consensus 190 s~~g~-----~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l-~GprgG~i~~~~~~ 260 (471)
++.|. .-.+++|+++|++||+++|+|++|. |+...|.... .+. ..|++ |++|++ +|.+.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~gr~G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhh-CCCCCcchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcH--
Confidence 33433 2346899999999999999999994 7744443211 111 34664 677998 567888988887
Q ss_pred CCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC--ceEee
Q 012104 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--YSLVT 338 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g--~~i~~ 338 (471)
++.+.+.........++ +....++...+++.+.. .+..+++.++.++|.+.|++.+ +.++.
T Consensus 268 -------------~~~~~~~~~~~~~t~~~-~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~ 330 (406)
T PRK12381 268 -------------KCASVMTVGTHGTTYGG-NPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFS 330 (406)
T ss_pred -------------HHHhhcCCCCCCCCCCC-CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 45554443222222333 33333444445555432 2456677777888888887653 32222
Q ss_pred CC-CCCeeEEEEccCCC-CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 339 GG-TENHLVLWDLRPLG-LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 339 ~~-~~~~~~~v~~~~~~-~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
.. ....++++.+.+.. .....+.+.|.++||.+.+. .++.+||..+... ++++++++.+.|.+++
T Consensus 331 ~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------g~~~lRl~p~~~~----t~~~i~~~~~~l~~~l 397 (406)
T PRK12381 331 EIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA---------GPNVVRFAPALNI----SEEEITTGLDRFARAC 397 (406)
T ss_pred EEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC---------CCCEEEEeCCccC----CHHHHHHHHHHHHHHH
Confidence 11 12345566654311 12456778888999998532 1358999876543 4899999999998887
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
..
T Consensus 398 ~~ 399 (406)
T PRK12381 398 ER 399 (406)
T ss_pred HH
Confidence 54
No 289
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.3e-14 Score=139.24 Aligned_cols=323 Identities=16% Similarity=0.200 Sum_probs=203.1
Q ss_pred CCeeEecC-------CCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCC-----CCCce
Q 012104 32 RGIELIAS-------ENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDP-----TQWGV 99 (471)
Q Consensus 32 ~~i~li~s-------~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~-----~~~~~ 99 (471)
+.++|..+ ...+=++|.+|....+.+... ++|.+-+..+.+.+ ...+-+||.++ ..+ +
T Consensus 27 ~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~------k~Yl~i~G~~~f~~---~~~~llFG~d~~~l~~~Rv-~ 96 (396)
T COG1448 27 NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKT------KNYLPIEGLPEFLE---AVQKLLFGADSPALAEDRV-A 96 (396)
T ss_pred CeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccc------cccCCcCCcHHHHH---HHHHHhcCCCcHHHHhhhH-h
Confidence 56888533 233457888887666544432 33444444444432 22334688553 223 6
Q ss_pred eeecCChHHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeee-ecCCCCCCCHHHHHHH
Q 012104 100 NVQPYSGSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYK-VNSSTGYIDYDKLEEK 176 (471)
Q Consensus 100 ~v~~~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~-v~~~~~~iD~~~le~~ 176 (471)
.+|+.+||.|+..+..-+ ..|..+|.+++|+++-|.. .+...++++..|+ .|.++..+|++.+-+.
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~-----------If~~aGl~v~~Y~Yyd~~~~~~df~~mla~ 165 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA-----------IFEAAGLEVETYPYYDAETKGLDFDGMLAD 165 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH-----------HHHhcCCceeeeeccccccccccHHHHHHH
Confidence 789999999988766544 6788899999999988742 2333444554444 3667778999998888
Q ss_pred hhhCCCc-EEE---EcCCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCC--CC-----Cc-cEEEeC
Q 012104 177 ALDFRPK-LII---CGGSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANP--FE-----YC-HIVTTT 241 (471)
Q Consensus 177 ~~~~~pk-lIi---~~~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p--~~-----~a-Div~~s 241 (471)
++..... +|+ |.+||||...+ |++|.++.++.|.+-+.|.||- |+-. |.-... +. +. =+|++|
T Consensus 166 L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQ-GF~~-GleeDa~~lR~~a~~~~~~lva~S 243 (396)
T COG1448 166 LKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQ-GFAD-GLEEDAYALRLFAEVGPELLVASS 243 (396)
T ss_pred HHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhh-hhcc-chHHHHHHHHHHHHhCCcEEEEeh
Confidence 7754333 444 55999998775 4567778889999999999986 6422 211110 11 11 388999
Q ss_pred CCCc--CCCCCeEEE-EeeCCCCCCCCCCCCCcccchHh----hhhhcCCCCCCCCCcHHHHHHHHHHH-----HHhccH
Q 012104 242 THKS--LRGPRAGMI-FYRKGPKPPKKGQPEGAVYDFED----KINFAVFPSLQGGPHNHQIGALAVAL-----KQASTP 309 (471)
Q Consensus 242 ~~K~--l~GprgG~i-~~~~~~~~~~~~~~~i~~~~l~~----~i~~~~~~~~~g~p~~~~iaa~a~al-----~~~~~~ 309 (471)
++|. |.|-|.|.+ +..+.- +... ++...+ .+..++|..|...-.+.-| +..-..
T Consensus 244 ~SKnfgLYgERVGa~~vva~~~-------------~~a~~v~sqlk~~i-R~~ySnPP~~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 244 FSKNFGLYGERVGALSVVAEDA-------------EEADRVLSQLKAII-RTNYSNPPAHGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred hhhhhhhhhhccceeEEEeCCH-------------HHHHHHHHHHHHHH-HhccCCCchhhHHHHHHHhCCHHHHHHHHH
Confidence 9999 677786543 332210 2222 222222 2345677776655444322 222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCC
Q 012104 310 AFKAYAKQVKANAVALGNYLTGK----GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAP 385 (471)
Q Consensus 310 ~~~~~~~~~~~na~~l~~~L~~~----g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 385 (471)
+...+++++.+.++.|.+.|++. .|..+.. ...++ .+ .|++.+++.++.++.||.+..
T Consensus 310 El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~-Q~GMF---sy--~Gls~~QV~rLree~~IY~v~------------ 371 (396)
T COG1448 310 ELEEMRQRILEMRQALVDALKALGAPRNFDFIIS-QRGMF---SY--TGLSPEQVDRLREEFGIYLVA------------ 371 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh-cCcee---ec--CCCCHHHHHHHHHhccEEEec------------
Confidence 45667788888888999999874 3554422 22222 22 278999999999999999853
Q ss_pred CeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 386 GGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 386 ~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
++ ||++. |+++..++.+++.|.++
T Consensus 372 sG-Ri~va-----Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 372 SG-RINVA-----GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred CC-eeeec-----cCChhhHHHHHHHHHhh
Confidence 23 88873 56678999999999775
No 290
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=2.3e-13 Score=137.63 Aligned_cols=307 Identities=17% Similarity=0.142 Sum_probs=175.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|++++++...+...+ +++. .++ ..++ ..+++.+..... + ..+.+.||++||.+++... ...+
T Consensus 46 ~p~v~~a~~~~~~~~~--~~~~-~~~------~~~~----~~la~~l~~~~~-~-~~~~~~SGseA~~~Al~~ar~~~~~ 110 (375)
T PRK04260 46 HPQVQQALQKQAGLIW--HSPN-LYL------NSLQ----EEVAQKLIGDKD-Y-LAFFCNSGAEANEAAIKIARKATGK 110 (375)
T ss_pred CHHHHHHHHHHHHhcC--cccC-ccC------CHHH----HHHHHHHhcCcC-C-EEEEcCccHHHHHHHHHHHHHhcCC
Confidence 7889999988774422 2221 111 1222 223333222221 1 3456789999999888765 3457
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccce-----eEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCc
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPR 194 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~ 194 (471)
++|++.+..|.|..... +...+.. +....-.+. .....|++.+++.+. .++.+|++. .++.|.
T Consensus 111 ~~vv~~~~~yHg~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~ 180 (375)
T PRK04260 111 QEIITFQNSFHGRTFGS--------MSATGQDKIKDGFGDGVPHFS-YAIFNDLNSVKALVN-KNTAAVMLELVQGESGV 180 (375)
T ss_pred CeEEEECCCcCcccHHH--------HhccCCcccCCCCCCCCCCeE-EeCCCCHHHHHHhcC-CCeEEEEECCeECCCCC
Confidence 88998887664432111 1111110 000000000 001358999998775 356666654 455665
Q ss_pred ccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcCC-CCCeEEEEeeCCCCCCCCC
Q 012104 195 DWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKG 266 (471)
Q Consensus 195 ~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l~-GprgG~i~~~~~~~~~~~~ 266 (471)
..+ ++++.++|+++|+++++|++|. |+...|.... -.. ..|++ |++|+|. |.+.|++++++
T Consensus 181 ~~~~~~~l~~~~~l~~~~~~~~i~De~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-------- 249 (375)
T PRK04260 181 LPADKDFVKALADYCQETGILLIVDEVQT-GMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS-------- 249 (375)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcH--------
Confidence 544 7899999999999999999996 7644443211 111 35655 6789985 56889999987
Q ss_pred CCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc----CC-ceEeeCCC
Q 012104 267 QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KG-YSLVTGGT 341 (471)
Q Consensus 267 ~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~----~g-~~i~~~~~ 341 (471)
++.+.+.........+++.. ..++...+++.... .++.+++.++.+.+++.|.+ .+ +..+.+
T Consensus 250 -------~~~~~~~~~~~~~t~~~~~~-~~~aa~a~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 316 (375)
T PRK04260 250 -------SLGGAFGYGSHGSTFGGNKL-SMAAASATLDIMLT---AGFLEQALENGNYLQEQLQKALQDKETVTTVRG-- 316 (375)
T ss_pred -------HHHhhcCCCCCCCCCCcCHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec--
Confidence 44444433222222232222 33334345555432 24445555555555555543 33 222222
Q ss_pred CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 342 ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 342 ~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
...++|+++. .+..++.+.|.+.||.+.+. ..+.+|+.++.. ++++|++++.+.|.++
T Consensus 317 ~g~~~~~~~~---~~~~~~~~~l~~~Gi~v~~~---------~~~~lR~~~~~~----~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 317 LGYMIGIETT---ADLSQLVEAARDKGLIVLTA---------GTNVIRLLPPLT----LTKEEIEQGIAILSEV 374 (375)
T ss_pred cceEEEEEec---CcHHHHHHHHHhCCCEEecC---------CCCEEEEcCCCc----cCHHHHHHHHHHHHHh
Confidence 3456788773 24677888999999998542 236899987543 4489999999988765
No 291
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=1.6e-13 Score=126.82 Aligned_cols=342 Identities=15% Similarity=0.113 Sum_probs=195.0
Q ss_pred cCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCC-C-CCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 31 CRGIELIASENFTSFAVIEALGSALTNKYSEGMPG-N-RYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 31 ~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~-~-r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
...|.|..+....-|++.+.+...+..-.++|.-. . -.|+|.+..+.+-+.....+.+-+|.+-.. -|+..+.||+
T Consensus 30 ~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~--~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA--QNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc--ceeeecCCcc
Confidence 34566665555556788777765554333333111 0 134455544444333346677777876543 3777888986
Q ss_pred -HHHHHHHHhc---CCCC--EEEE-eCCCCCCcccccccccCCccceeccceeE-EEe-eeecCC---CCCCCHHHHHHH
Q 012104 109 -ANFAAYTAVL---EPHD--RIMG-LDLPSGGHLTHGYYTSGGKKISATSIYFE-SLP-YKVNSS---TGYIDYDKLEEK 176 (471)
Q Consensus 109 -A~~~~~~all---~pGD--~Vl~-~~~~~~g~~s~~~~~~~g~~~~~~g~~~~-~~~-~~v~~~---~~~iD~~~le~~ 176 (471)
|.+-++.-+- ..|+ +|+. +.|+|-|+-..+ ..+..+. ..+ ++..+. ..++|.++|.-.
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~----------l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~ 177 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG----------LEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG 177 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccc----------cCccceeeccCCcccccccceeeccCHHHcccc
Confidence 6666555542 3454 3444 477886653211 1111010 000 111211 257888887632
Q ss_pred hhhCCCcEEEEc--CCCCCccccHH---HHHHHHHHhCCEEEEeccccchhhccccCCCCCC---Ccc-EEEeCCCCc-C
Q 012104 177 ALDFRPKLIICG--GSAYPRDWDYA---RFRAVADKCGALLLCDMAHISGLVAAQEAANPFE---YCH-IVTTTTHKS-L 246 (471)
Q Consensus 177 ~~~~~pklIi~~--~s~~g~~~d~~---~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~---~aD-iv~~s~~K~-l 246 (471)
..+.+|+++ .||+|.++.-+ ++.++|++||+++++|.||+. -+.+...+... +-. +.++|++|. |
T Consensus 178 ---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~--PFP~iifsd~~~~w~~NiilC~SLSK~GL 252 (417)
T COG3977 178 ---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV--PFPGIIFSDATPLWNENIILCMSLSKLGL 252 (417)
T ss_pred ---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC--CCCceecccccccCCCCEEEEeehhhcCC
Confidence 467788887 78999887655 445789999999999999952 22222222221 222 779999999 9
Q ss_pred CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-----CCCCCCCCCcHHHHHHHHHHHHHhccHHHHH--------
Q 012104 247 RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----VFPSLQGGPHNHQIGALAVALKQASTPAFKA-------- 313 (471)
Q Consensus 247 ~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-----~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~-------- 313 (471)
+|-|+|+++.+++ +.+.+.+. ..|+-.| ..+++- .+.+.++.+
T Consensus 253 PG~R~GIiIane~---------------viqaitnmn~iisLap~~~G----~Aia~~-----mie~gdl~rlseqVIrP 308 (417)
T COG3977 253 PGSRCGIIIANEK---------------VIQAITNMNGIISLAPGRMG----PAIAAE-----MIESGDLLRLSEQVIRP 308 (417)
T ss_pred CCcceeEEEccHH---------------HHHHHHhccceeeecCCCcc----HHHHHH-----HhhcchHHHHHHHhhhH
Confidence 9999999999873 34333321 1222221 122221 111112222
Q ss_pred -HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCC--C--CCCCCCee
Q 012104 314 -YAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD--S--SALAPGGV 388 (471)
Q Consensus 314 -~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~--~--~~~~~~~i 388 (471)
|.+++......|++.|-+.-+.+. .+.+.-+.|+-|....++..++.+.|+++|+.+.|+..++. . -|-....+
T Consensus 309 FY~~~~q~~~~~l~~~lp~~~~~iH-kpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~ 387 (417)
T COG3977 309 FYRNRVQTTIAILRRYLPEYRCLIH-KPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCM 387 (417)
T ss_pred HHHHHHHHHHHHHHHhcCccceeee-cCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceE
Confidence 233333334455666655556665 34566677877777778999999999999999998865432 2 23334679
Q ss_pred EEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 389 RIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 389 Rig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
|++. ...-...+..+.++++.++++.
T Consensus 388 Rmn~--~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 388 RMNY--VPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred EEec--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9987 2222233556666666666554
No 292
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.62 E-value=3.3e-13 Score=126.25 Aligned_cols=336 Identities=18% Similarity=0.146 Sum_probs=211.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHH-HHHHHHh--cC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPAN-FAAYTAV--LE 119 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~-~~~~~al--l~ 119 (471)
.++.+.....+.....|.++...++..+...+.+.-|.+ -++++-+.|+...+ + | .+.++..| +-++.+. ..
T Consensus 43 ~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~l-gdklApLiGA~~~E--v-v-v~dtts~nl~k~L~aalr~~ 117 (407)
T COG3844 43 RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERL-GDKLAPLIGARAGE--V-V-VTDTTSINLFKVLAAALRPQ 117 (407)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHH-HHHhhhhhcCCCCc--e-E-EeCCcchHHHHHHHHHhccC
Confidence 465776666677777777776665554445566655544 47889999998764 3 3 23444444 3344444 45
Q ss_pred CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCC--CCcccc
Q 012104 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSA--YPRDWD 197 (471)
Q Consensus 120 pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~--~g~~~d 197 (471)
+|++|++++-.. +.| .++...| .+...+.. +++ .+.++++++++.+.+ ...+|+.++.. +|...|
T Consensus 118 ~~r~vIv~E~~~--fpT-dly~a~g-~~~~~~~~-----~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~d 184 (407)
T COG3844 118 EGRRVIVSEGDN--FPT-DLYIAEG-LADLLGIG-----YDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLD 184 (407)
T ss_pred CCceEEeecCCC--CCc-chhhhcc-hhhhhccc-----ccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceee
Confidence 699999886322 222 2222111 11222222 222 256788899998874 57778777433 699999
Q ss_pred HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcCCCCCe--EEEEeeCCCC-CC-CCCCCCCc
Q 012104 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSLRGPRA--GMIFYRKGPK-PP-KKGQPEGA 271 (471)
Q Consensus 198 ~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l~Gprg--G~i~~~~~~~-~~-~~~~~~i~ 271 (471)
+.+|.++|+++|++++-|-+|++|.+ |..+. ++|+-+.++||.|.|..| ++++..+... .. +.-+.+.-
T Consensus 185 m~aiT~~AH~~galv~wDLAHsaGav-----p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~g 259 (407)
T COG3844 185 MRAITALAHQHGALVGWDLAHSAGAV-----PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWG 259 (407)
T ss_pred HHHHHHHHHhcCceEEeehhcccCCc-----ceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccC
Confidence 99999999999999999999998853 33443 799999999999865433 5555544322 11 11111100
Q ss_pred ---ccchHhhhhh--cCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC----CceEeeCC--
Q 012104 272 ---VYDFEDKINF--AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK----GYSLVTGG-- 340 (471)
Q Consensus 272 ---~~~l~~~i~~--~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~----g~~i~~~~-- 340 (471)
-+.+.+.... ......+|++....++++--+|.....-++.+.+++.+....++.+-++.. ++++.++-
T Consensus 260 ha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~ 339 (407)
T COG3844 260 HARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAH 339 (407)
T ss_pred CCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchh
Confidence 0122221111 111224567777777777777776655567888888888888888877654 67776532
Q ss_pred --CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 341 --TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 341 --~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.++|. .+.. -.+.++.+.|.++||.... ..++.+|+|+..+- .+-.|+-...+.|.++++.
T Consensus 340 ~~rGsqv-S~~h----p~~~~V~qaLi~rGVigD~---------R~P~vlRfgftPlY---~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 340 EERGSQV-SLYH----PHGYQVMQALIDRGVIGDF---------REPDVLRFGFTPLY---VSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred hhcccee-eEec----CcHHHHHHHHHHcCccccc---------cCCCeeeecCccce---echhHHHHHHHHHHHHHHh
Confidence 23443 2222 2688999999999998643 23589999985542 2357888888888888765
No 293
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.62 E-value=3.6e-13 Score=138.44 Aligned_cols=324 Identities=17% Similarity=0.096 Sum_probs=176.6
Q ss_pred CCeeEecCC-----CCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh
Q 012104 32 RGIELIASE-----NFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG 106 (471)
Q Consensus 32 ~~i~li~s~-----n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG 106 (471)
..|.+..+- .+.+|.|.+++...+.+.. .|+...+. ..++ .+++++++.... -.+.++||
T Consensus 49 ~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-------~~~~~~~~---~~~l-ae~l~~~~~~~~----~v~~~~sG 113 (423)
T TIGR00713 49 EYIDYVLSWGPLILGHAHPRVVEAVKEALERGT-------SYGAPTEA---EILL-AKEIISRVPSVE----MVRFVNSG 113 (423)
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCC-------cCCCCCHH---HHHH-HHHHHHhCCccc----EEEEeCCH
Confidence 345665443 1457999999988775422 11111111 1222 355666665322 23557899
Q ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEE---------------EeeeecCCCCCCC
Q 012104 107 SPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES---------------LPYKVNSSTGYID 169 (471)
Q Consensus 107 t~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~---------------~~~~v~~~~~~iD 169 (471)
++|+.+++... ....++|+..++.|.|+.. +. ...++..... ..+.+. ..|
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d 181 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHD-AL-------LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP----YND 181 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChh-hh-------hccccCcccccCCCCCCCCCcccccceEEeC----CCC
Confidence 99999988753 2356999999988866421 00 0000000000 001111 238
Q ss_pred HHHHHHHhhh--CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCCCC-CccEEE
Q 012104 170 YDKLEEKALD--FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE-YCHIVT 239 (471)
Q Consensus 170 ~~~le~~~~~--~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p~~-~aDiv~ 239 (471)
++++++.+.. .+++.|++. .++.|...+ +++|+++|+++|+++|+|++|. |+..+... ...+. ..|++
T Consensus 182 ~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~r~g~~~~~~~~~~~pDi~- 259 (423)
T TIGR00713 182 LEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMT-GFRVALGGAQEYFGVEPDLT- 259 (423)
T ss_pred HHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-ccccCcchhHHHhCCCcchh-
Confidence 9999998864 345677654 445676655 6799999999999999999995 77432111 01111 34655
Q ss_pred eCCCCcCC-CCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc---CCCCCCCCCcHHHHHHHHHHHHHhccHHH-HHH
Q 012104 240 TTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA---VFPSLQGGPHNHQIGALAVALKQASTPAF-KAY 314 (471)
Q Consensus 240 ~s~~K~l~-GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~---~~~~~~g~p~~~~iaa~a~al~~~~~~~~-~~~ 314 (471)
+++|.+. |.|.|++++++ ++.+.+... .....++++.... ++..++++.+.++.+ +..
T Consensus 260 -t~sK~l~~G~pig~v~~~~---------------~i~~~~~~~~~~~~~~T~~~~~~~~-aaa~a~l~~~~~~~~~~~~ 322 (423)
T TIGR00713 260 -TLGKIIGGGLPVGAFGGRR---------------EIMERLAPEGPVYQAGTLSGNPLAM-AAGLATLKLLDEEGVYTEL 322 (423)
T ss_pred -hhhhhhcCCCceeeeeEHH---------------HHHHhhCcCCCeeeccCCCCCHHHH-HHHHHHHHHHhcccHHHHH
Confidence 5789974 56889999987 455555421 1112233333333 333345665543322 222
Q ss_pred HHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCC---------CCHH---HHHHHHhhcCeEeccCCcCCCCCC
Q 012104 315 AKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLG---------LTGN---KVEKLCDLCNITVNKNAVFGDSSA 382 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~---------~~~~---~~~~~L~~~gI~v~~~~~p~~~~~ 382 (471)
.+......+.|.+.+.+.++.....+.+. ++.+.+.... .+.. .+.+.|.++||.+.+..
T Consensus 323 ~~~~~~~~~~l~~~~~~~~~~~~v~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~------- 394 (423)
T TIGR00713 323 DELAKRLAEGLSEVLEDTGIPHTVNRVGS-MFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ------- 394 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEEeecc-EEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC-------
Confidence 22222233334444455565432112222 3333232111 1222 45566777999986421
Q ss_pred CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 383 LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 383 ~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.+.+|++.+ .++++++++.+.+.+++.
T Consensus 395 --~~~~~l~~~------~t~~~i~~~~~~l~~~l~ 421 (423)
T TIGR00713 395 --FEACFLSAA------HTEEDIENTIEAAEEVFA 421 (423)
T ss_pred --ccceeeECC------CCHHHHHHHHHHHHHHHh
Confidence 134788652 358999999999988775
No 294
>PLN02624 ornithine-delta-aminotransferase
Probab=99.61 E-value=1.7e-12 Score=134.69 Aligned_cols=317 Identities=17% Similarity=0.134 Sum_probs=175.3
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcC----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE---- 119 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~---- 119 (471)
.|.|.+++.+.+.+ +..+ ..++. .+...+ + .++++++++.+. .+..+||++|+.+++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~--~~~~~--~~~~~~---l-a~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLS--SRAFY--NDKFPE---F-AEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cCCc--ccccC--CHHHHH---H-HHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 79999999887754 3212 11222 121112 2 356777887653 35578999999998863321
Q ss_pred ----C-CC-EEEEeCCCCCCcccccccccCCccceeccceeEEEee-eecCCC---CCCCHHHHHHHhhhC--CCcEEEE
Q 012104 120 ----P-HD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPY-KVNSST---GYIDYDKLEEKALDF--RPKLIIC 187 (471)
Q Consensus 120 ----p-GD-~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-~v~~~~---~~iD~~~le~~~~~~--~pklIi~ 187 (471)
+ |. +|+...-.| ||.-.. .++..+.......+ +..+.. ...|++.+++.++.. +..+|++
T Consensus 159 ~~g~~~~~~~ii~~~~~y-----HG~t~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiii 230 (474)
T PLN02624 159 KKGIPKNEAIIVSCCGCF-----HGRTLA---AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLF 230 (474)
T ss_pred hcCCCCCCcEEEEECCCc-----CCCCHH---HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEE
Confidence 2 33 466665333 332100 11121110000000 000000 123789999988642 3456666
Q ss_pred c--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCCC-C-CccEEEeCCCCcCCC--CCeEEEEe
Q 012104 188 G--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPF-E-YCHIVTTTTHKSLRG--PRAGMIFY 256 (471)
Q Consensus 188 ~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p~-~-~aDiv~~s~~K~l~G--prgG~i~~ 256 (471)
. +++.|...+ +++|+++|+++|+++|+|++|. |+-..|.. .... . ..|+++. +|.+.| .+.|+++.
T Consensus 231 Epv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~ 307 (474)
T PLN02624 231 EPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLA 307 (474)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeee
Confidence 5 667887777 8999999999999999999997 65333321 1111 1 3577775 599755 46788887
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC--c
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--Y 334 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g--~ 334 (471)
++ ++...+.........+++... .++..++++.+..+ +..++..++.+.|++.|++.. +
T Consensus 308 ~~---------------~i~~~~~~~~~~~T~~g~pl~-~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~ 368 (474)
T PLN02624 308 DK---------------DVMLCIKPGEHGSTFGGNPLA-SAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQF 368 (474)
T ss_pred cH---------------HHHhHhccCCcCCCCCCCHHH-HHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 76 333333322111222333333 33444456554332 233444555566666665531 2
Q ss_pred e----EeeCCCCCeeEEEEccCCC---CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 335 S----LVTGGTENHLVLWDLRPLG---LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 335 ~----i~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
. -+. +. ..++.+.+.... ....++.+.|.++||.+.+. ..+.+||+.+.. ++++++++
T Consensus 369 ~~~i~~vr-g~-G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~---------~~~~lR~~p~l~----~t~e~id~ 433 (474)
T PLN02624 369 PKLIKEVR-GR-GLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPT---------HDTIIRLAPPLS----ISEDELQE 433 (474)
T ss_pred CCceEEEE-ee-EEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecC---------CCCEEEEECCcc----CCHHHHHH
Confidence 1 111 22 223333443211 12346777788999999642 246899987544 45899999
Q ss_pred HHHHHHHHHHHH
Q 012104 408 IGEFLHRAVTLT 419 (471)
Q Consensus 408 l~~~i~~~l~~~ 419 (471)
+.+.|.+++...
T Consensus 434 ~l~~L~~~l~~~ 445 (474)
T PLN02624 434 CSKALSDVLEHD 445 (474)
T ss_pred HHHHHHHHHHHH
Confidence 999998887654
No 295
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.60 E-value=6.3e-14 Score=133.52 Aligned_cols=165 Identities=19% Similarity=0.157 Sum_probs=124.2
Q ss_pred CCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccc
Q 012104 62 GMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYT 141 (471)
Q Consensus 62 g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~ 141 (471)
||.-.|. ++...+.+| +|++.+=|--. .+.+.||..|...++..++++||.|+..+--|||..+. +.
T Consensus 53 G~iYsRi--~NPT~~vlE----~RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~l--f~ 119 (426)
T COG2873 53 GNIYTRI--MNPTTDVLE----ERIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNL--FS 119 (426)
T ss_pred Cceeeec--cCchHHHHH----HHHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHH--HH
Confidence 6655564 456677888 57777765322 35578999999999999999999999999999986531 11
Q ss_pred cCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 142 SGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 142 ~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
..+...+.++..+ | ..|++.+++.+++ ++|+|++. .||-+.+.|++.|++||+++|++++||....
T Consensus 120 -----~tl~~~Gi~v~fv--d----~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~a 187 (426)
T COG2873 120 -----HTLKRLGIEVRFV--D----PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFA 187 (426)
T ss_pred -----HHHHhcCcEEEEe--C----CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCC
Confidence 1122223344443 2 3479999999974 89999975 7899999999999999999999999999865
Q ss_pred chhhccccCCCCCC-CccEEEeCCCCcCCCCC---eEEEEe
Q 012104 220 SGLVAAQEAANPFE-YCHIVTTTTHKSLRGPR---AGMIFY 256 (471)
Q Consensus 220 ~glv~~g~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~ 256 (471)
.. ....|++ +||||+.|++|++.|-. ||+|+-
T Consensus 188 tp-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 188 TP-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred cc-----eecchhhcCCCEEEEeecccccCCccccceEEEe
Confidence 33 3456787 89999999999997753 455553
No 296
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.60 E-value=5.7e-13 Score=127.45 Aligned_cols=272 Identities=18% Similarity=0.274 Sum_probs=144.3
Q ss_pred HHHHHHHhhh-hhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeee--cCChHHHHHHHHHHhcCCC
Q 012104 45 FAVIEALGSA-LTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQ--PYSGSPANFAAYTAVLEPH 121 (471)
Q Consensus 45 ~~v~~a~~~~-l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~--~~sGt~A~~~~~~all~pG 121 (471)
..|++|+... +......|..| |--+....+.+| +-.++.||++. +.|+ ..|||+|+.+++.++|+||
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTG--YGY~D~GRd~le----~iyA~vfgaE~----ALVRpq~vSGTHAi~~~Lfg~LrpG 96 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTG--YGYDDIGRDKLE----RIYADVFGAED----ALVRPQFVSGTHAIALALFGVLRPG 96 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---T--T-TT-HHHHHHH----HHHHHHCT-SE----EEEETTS-SHHHHHHHHHHHH--TT
T ss_pred HHHHHHHHHcCCChhhcCCCCc--CCCCCccHHHHH----HHHHHHhCchh----hhhcccccchHHHHHHHHHhcCCCC
Confidence 4677777543 22222222222 111334556677 35678999997 4555 5699999999999999999
Q ss_pred CEEEEeC-CCCC------Ccc--cccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCC-C
Q 012104 122 DRIMGLD-LPSG------GHL--THGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGS-A 191 (471)
Q Consensus 122 D~Vl~~~-~~~~------g~~--s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s-~ 191 (471)
|+++... .+|- |.- ..| .+.-.|..|+-+++ . +++.+|++.+++.++ .++|+|++--| -
T Consensus 97 D~ll~~tG~PYDTL~~VIG~~g~~~G-------SL~e~Gi~Y~~v~L--~-~dg~~D~~~i~~~~~-~~tk~v~IQRSrG 165 (403)
T PF06838_consen 97 DELLSITGKPYDTLEEVIGIRGNGPG-------SLKEFGIKYREVPL--T-EDGTIDWEAIKKALK-PNTKMVLIQRSRG 165 (403)
T ss_dssp -EEEESSSS--CCHHHHHTSSSSSSS-------STGGGT-EEEE--B----TTSSB-HHHHHHHHH-TTEEEEEEE-S-T
T ss_pred CeEEEcCCCchhhHHHHhCCCCCCCC-------ChHHhCceeEEEee--c-CCCCcCHHHHHHhhc-cCceEEEEecCCC
Confidence 9999753 3331 100 111 12234555554444 4 458999999999998 58899986421 1
Q ss_pred C--CccccHHHHHHHH---HHh--CCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCC---CCeEEEEeeCCC
Q 012104 192 Y--PRDWDYARFRAVA---DKC--GALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRG---PRAGMIFYRKGP 260 (471)
Q Consensus 192 ~--g~~~d~~~i~~ia---~~~--g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~G---prgG~i~~~~~~ 260 (471)
| -..+.+++|.+++ |+. +++++||.+|. .++- ...|.. +||++.+|+=|+..| |-||+|+.++
T Consensus 166 Ys~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~-- 239 (403)
T PF06838_consen 166 YSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK-- 239 (403)
T ss_dssp TSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH--
T ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH--
Confidence 2 2234555665554 443 89999999996 4432 223444 899999999999755 6899999998
Q ss_pred CCCCCCCCCCcccchHhhhh-hcCCCCCC--CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEe
Q 012104 261 KPPKKGQPEGAVYDFEDKIN-FAVFPSLQ--GGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLV 337 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~-~~~~~~~~--g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~ 337 (471)
++.++.. +..-||.. .|+.....-.+...| .+.| ....+-++-+-..+..++++||++.
T Consensus 240 -------------~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGl--FlAP---~vV~eAlKgaif~A~~fe~lG~~v~ 301 (403)
T PF06838_consen 240 -------------DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGL--FLAP---HVVGEALKGAIFAAALFEKLGFEVS 301 (403)
T ss_dssp -------------HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHH--HHHH---HHHHHHHHHHHHHHHHHHHTT-EEE
T ss_pred -------------HHHHHHHhhhcCCccccccccCcchHHHHHhHH--hhch---HHHHHHHHHHHHHHHHHHHcCCcCC
Confidence 5665543 33446542 122222111121122 1122 3344556666677778888999996
Q ss_pred eCCCCC--e-eEEEEccCCCCCHHHHHHHHh
Q 012104 338 TGGTEN--H-LVLWDLRPLGLTGNKVEKLCD 365 (471)
Q Consensus 338 ~~~~~~--~-~~~v~~~~~~~~~~~~~~~L~ 365 (471)
+...+. - +-.+.+. +.+.+..+++
T Consensus 302 P~~~~~R~DiIQai~l~----~~e~l~~FC~ 328 (403)
T PF06838_consen 302 PKPDDPRSDIIQAIELG----SPEKLIAFCQ 328 (403)
T ss_dssp S-TTS--SSS-EEEE-S----SHHHHHHHHH
T ss_pred CCCCCCCCceEEEEECC----CHHHHHHHHH
Confidence 533221 1 2244553 5677776665
No 297
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=2.7e-13 Score=122.95 Aligned_cols=273 Identities=18% Similarity=0.137 Sum_probs=179.7
Q ss_pred eeecCChH-HHHHHHHHHhcCCC-CEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHh
Q 012104 100 NVQPYSGS-PANFAAYTAVLEPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKA 177 (471)
Q Consensus 100 ~v~~~sGt-~A~~~~~~all~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~ 177 (471)
++...-|+ +.+.+++.+.+-|| ++|+..+|+|+-+. +...-...+++..+.++ ++.+|.|++.+.+
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~-----------v~A~iNd~eVvkvpl~p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV-----------VDAAINDAEVVKVPLNP-DFSLNVDAIAEVL 155 (375)
T ss_pred ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE-----------EEeecCCceEEEecCCC-CccccHHHHHHHH
Confidence 55556677 57889999999999 99999999987542 11221234666666664 6899999999988
Q ss_pred hhC-CCcEEEE-c-CCCCCccccHHHHHHHHHHh-CCEEEEeccccchhhcccc-CCCCCCCcc-EEEeCCCCc--CCCC
Q 012104 178 LDF-RPKLIIC-G-GSAYPRDWDYARFRAVADKC-GALLLCDMAHISGLVAAQE-AANPFEYCH-IVTTTTHKS--LRGP 249 (471)
Q Consensus 178 ~~~-~pklIi~-~-~s~~g~~~d~~~i~~ia~~~-g~~livD~a~~~glv~~g~-~~~p~~~aD-iv~~s~~K~--l~Gp 249 (471)
... ++|++++ + .||+|..+..+.|.+|-+-- +.++++|+||+ .+.+.+. .+..-+|.. ++.-+++|+ |.|.
T Consensus 156 ~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYi-dFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGi 234 (375)
T KOG0633|consen 156 ELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYI-DFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGI 234 (375)
T ss_pred hccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeE-eeccccccchHhHhCCceeehhhhhhhcCccee
Confidence 755 7898874 4 78999999888888887643 78999999997 4433111 111112555 778899999 7888
Q ss_pred CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 250 RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 250 rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
|.|+-.++. .+++.++++.-|+..+.+. ..+|++ |+..-.-..++.+...+.+...+|...|
T Consensus 235 RvG~~~~~~---------------~ia~iln~~KaPYNiS~~~--s~~AL~-Als~~n~kkme~~rdaiv~er~RL~keL 296 (375)
T KOG0633|consen 235 RVGYGAFPL---------------SIAEILNRAKAPYNISVAG--SVAALA-ALSDSNGKKMEDVRDAIVRERERLFKEL 296 (375)
T ss_pred EeecccccH---------------HHHHHHHhccCCccccchh--HHHHHH-hcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 999988887 5777788777776543321 223332 2321111235667777777788888888
Q ss_pred HcC-CceEeeCCCCCeeEEEEccC--CCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 330 TGK-GYSLVTGGTENHLVLWDLRP--LGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 330 ~~~-g~~i~~~~~~~~~~~v~~~~--~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
.+. ++.-+.+|.+.+++++.+.. .+.......+.+...|+.|+-. +. .+...+++||+.. ++++-.
T Consensus 297 t~v~~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfr---gs-e~~c~G~lRitvG-------t~Eent 365 (375)
T KOG0633|consen 297 TEVPFLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFR---GS-EEGCKGYLRITVG-------TPEENT 365 (375)
T ss_pred hcCccccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEc---CC-ccccceeEEEEcC-------Ccccch
Confidence 876 44433467788888887653 1222223456677899999742 21 1223578999762 134555
Q ss_pred HHHHHHHH
Q 012104 407 QIGEFLHR 414 (471)
Q Consensus 407 ~l~~~i~~ 414 (471)
.+.+.+++
T Consensus 366 vL~k~~K~ 373 (375)
T KOG0633|consen 366 VLMKCLKQ 373 (375)
T ss_pred HHHHHHHh
Confidence 55555543
No 298
>PLN00144 acetylornithine transaminase
Probab=99.57 E-value=3.6e-12 Score=128.91 Aligned_cols=315 Identities=20% Similarity=0.157 Sum_probs=174.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc---C
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---E 119 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---~ 119 (471)
-.|+|.+++...+.... +.+..++ ++. .+ ++ .+++.++++.+. .....|||+|+.+++.... .
T Consensus 32 ~~p~v~~ai~~q~~~~~---~~~~~~~--~~~--~~-~l-a~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~~ 97 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLA---HVSNVYH--TIP--QV-EL-AKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQR 97 (382)
T ss_pred CCHHHHHHHHHHHHhcC---Ccccccc--CHH--HH-HH-HHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHHh
Confidence 36888888877775321 1111111 111 11 22 245556655432 3557899999998887431 1
Q ss_pred ------C------CCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCC---CCCCHHHHHHHhhhCCCc
Q 012104 120 ------P------HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSST---GYIDYDKLEEKALDFRPK 183 (471)
Q Consensus 120 ------p------GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~---~~iD~~~le~~~~~~~pk 183 (471)
+ ..+|+...-.|.|.-. + .++..+.. ++....+..+.. ...|++.+++.+...+++
T Consensus 98 ~~~~~~~~~~~~~r~~ii~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~a 169 (382)
T PLN00144 98 VRAPDKKDPAASSATEFVSFSNSFHGRTL-G-------ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTA 169 (382)
T ss_pred ccCCCCccccccccceEEEECCCcccccH-H-------HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeE
Confidence 1 2578888866544310 1 11111110 000000000000 123789999888656778
Q ss_pred EEEEc--CCCCCccc--c--HHHHHHHHHHhCCEEEEeccccchhhccccCC-CCC-C-CccEEEeCCCCcC-CCCCeEE
Q 012104 184 LIICG--GSAYPRDW--D--YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NPF-E-YCHIVTTTTHKSL-RGPRAGM 253 (471)
Q Consensus 184 lIi~~--~s~~g~~~--d--~~~i~~ia~~~g~~livD~a~~~glv~~g~~~-~p~-~-~aDiv~~s~~K~l-~GprgG~ 253 (471)
.|++. +++.|... . +++++++|+++|+++|+|++|. |+-..|... ... . ..|+ .|++|+| +|.+.|+
T Consensus 170 avi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~PDi--~t~sK~l~~G~pig~ 246 (382)
T PLN00144 170 AVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQC-GLGRTGYLWAHEAYGVEPDI--MTLAKPLAGGLPIGA 246 (382)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchHhhhhhcCCCCCE--EEecccccCCcceEE
Confidence 88765 44422221 2 6789999999999999999986 664444321 111 1 3574 4556997 4667899
Q ss_pred EEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH----
Q 012104 254 IFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL---- 329 (471)
Q Consensus 254 i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L---- 329 (471)
+++++ ++.+.+.........+++... .++..++++.+.++++.+ ++....+.|.+.|
T Consensus 247 v~~~~---------------~~~~~~~~~~~~~T~~~~pl~-~aaa~a~l~~i~~~~~~~---~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 247 VLVTE---------------KVASAINPGDHGSTFAGGPLV-CNAALAVLDKISKPGFLA---SVAKKGEYLRELLRRKL 307 (382)
T ss_pred EEEcH---------------HHHhccCCCCCCCCCCCCHHH-HHHHHHHHHHHhhchHHH---HHHHHHHHHHHHHHHHH
Confidence 99987 344444332222233333333 333444566654434433 3333334444433
Q ss_pred HcCC-ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHH
Q 012104 330 TGKG-YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQI 408 (471)
Q Consensus 330 ~~~g-~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l 408 (471)
.+.+ +.-+.+ ...++|+.+. .+...+...+.+.||.+.+. + ..+.||+..+... +++++++.
T Consensus 308 ~~~~~~~~vrg--~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~~~---~-----~~~~lrl~p~~~~----~~~~i~~~ 370 (382)
T PLN00144 308 GGNPHVKEVRG--VGLLVGIQLD---VPAGPLVDACRDSGLLVLTA---G-----KGDVVRLVPPLVI----SEAELEQA 370 (382)
T ss_pred hhCCCceeeec--CceEEEEEec---CccHHHHHHHHHCCeEEeec---C-----CCCEEEEeCCCcc----CHHHHHHH
Confidence 3332 111122 3556788772 23467888888999999653 1 1368999876532 37899999
Q ss_pred HHHHHHHHHH
Q 012104 409 GEFLHRAVTL 418 (471)
Q Consensus 409 ~~~i~~~l~~ 418 (471)
.+.|.+++..
T Consensus 371 ~~~l~~~l~~ 380 (382)
T PLN00144 371 VEILADCLPA 380 (382)
T ss_pred HHHHHHHHHh
Confidence 9999988753
No 299
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=4.7e-13 Score=147.49 Aligned_cols=286 Identities=15% Similarity=0.060 Sum_probs=178.4
Q ss_pred HHHHHHHhcCCCCCCCceeee-cCChHHHHHHHHHHh-cCCC--CEEEEeCCCCCCcccccccccCCccceeccceeEEE
Q 012104 82 CRSRALQTFHLDPTQWGVNVQ-PYSGSPANFAAYTAV-LEPH--DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~-~~sGt~A~~~~~~al-l~pG--D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~ 157 (471)
.+..+++|.|++.+ |+. ..++|.+..++++++ +++| |+|++.+..|+....-. .-.....+++++
T Consensus 126 ~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~-------~t~a~~~G~ev~ 194 (954)
T PRK05367 126 FQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVL-------RTRAEPLGIEVV 194 (954)
T ss_pred HHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHH-------HHHHHhCCCEEE
Confidence 56789999999874 333 335666777777776 5664 99999998887654210 001123345555
Q ss_pred eeeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Cc
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC 235 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~a 235 (471)
..+.+. |.+ ..+...++ ..++.+|...|+++|.++|+++|+++++|..+.+.. ....|-+ +|
T Consensus 195 ~~~~~~-----d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~----~l~~pge~Ga 258 (954)
T PRK05367 195 VGDAAK-----ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALT----LLTPPGEMGA 258 (954)
T ss_pred EecCcc-----CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhcc----CCCChhhcCC
Confidence 554331 111 11233333 347789999999999999999999999999774332 2233434 89
Q ss_pred cEEEeCCCCc-----CCCCCeEEEEeeCCCCC-CCCC--C-----CCCcccchH--hhhhhcCCCCCCCCCcH---HHHH
Q 012104 236 HIVTTTTHKS-----LRGPRAGMIFYRKGPKP-PKKG--Q-----PEGAVYDFE--DKINFAVFPSLQGGPHN---HQIG 297 (471)
Q Consensus 236 Div~~s~~K~-----l~GprgG~i~~~~~~~~-~~~~--~-----~~i~~~~l~--~~i~~~~~~~~~g~p~~---~~ia 297 (471)
||+++++||| ++||..|++.++++++. .... | .+-..|.+. .+-+...+ ..++.+. +.+.
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRr--ekaTsNict~qaL~ 336 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRR--EKATSNICTAQVLL 336 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccc--cccccccchHHHHH
Confidence 9999999999 77887799999876422 1110 1 000001110 00000011 1122222 1222
Q ss_pred HHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCC
Q 012104 298 ALAVA--LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 298 a~a~a--l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~ 375 (471)
+..++ +..+...++++..+++..++.++++.|.+.|+++... ..-..+.+++. .+..++.+.|.++||.++..
T Consensus 337 a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~-~~f~~~~~~~~---~~~~~i~~~l~~~gi~~~~~- 411 (954)
T PRK05367 337 AVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHD-SFFDTLTVEVG---GDAAAVLARALAAGINLRRV- 411 (954)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCC-CCCCeEEEeCC---CCHHHHHHHHHHCCceeccc-
Confidence 22212 2334456788999999999999999998889887533 21223444442 36788999999999998432
Q ss_pred cCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 376 VFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 376 ~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
..+.+|+++...++ ++|++++++++.
T Consensus 412 --------~~~~l~is~~e~~t----~~did~l~~~l~ 437 (954)
T PRK05367 412 --------DDDHVGISLDETTT----REDLAALLAVFG 437 (954)
T ss_pred --------cCCEEEEEecccCC----HHHHHHHHHHHc
Confidence 13579999877765 899999999996
No 300
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.55 E-value=9.1e-12 Score=121.80 Aligned_cols=330 Identities=18% Similarity=0.189 Sum_probs=193.1
Q ss_pred cCCeeEecCCC-----CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-CCCCCCceeeecC
Q 012104 31 CRGIELIASEN-----FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPY 104 (471)
Q Consensus 31 ~~~i~li~s~n-----~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~ 104 (471)
+..|+++++-. ...|.+.+++......-+- .+.-|+. +..++++ +++.++.+ .+. .+..+
T Consensus 42 ~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h---~sn~~~~-----~~~~~la-~~L~~~s~~~d~-----vff~N 107 (404)
T COG4992 42 REYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWH---VSNLFYN-----EPQAELA-EKLVELSPFADR-----VFFCN 107 (404)
T ss_pred CEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhh---cccccCC-----hHHHHHH-HHHHhhCccccE-----EEEcC
Confidence 45677765432 2479999998876544332 1222321 2233333 45666775 433 46688
Q ss_pred ChHHHHHHHHHHh--c-C-C-CCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCC---CCCCCHHHHHH
Q 012104 105 SGSPANFAAYTAV--L-E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSS---TGYIDYDKLEE 175 (471)
Q Consensus 105 sGt~A~~~~~~al--l-~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~---~~~iD~~~le~ 175 (471)
||++||.+++... . . | .-+|+.+.-.+.|.- -+ .++..+.. |+--..|.-+. -..-|++++++
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT-~g-------alS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRT-LG-------ALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCcc-ce-------eeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 9999999999754 2 2 2 247888876654431 11 23444432 21111111111 12458999999
Q ss_pred HhhhCCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC-CC-CC-CccEEEeCCCCcC
Q 012104 176 KALDFRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA-NP-FE-YCHIVTTTTHKSL 246 (471)
Q Consensus 176 ~~~~~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~-~p-~~-~aDiv~~s~~K~l 246 (471)
++.+ ++..|++- +-..|...+ ++.++++|++||+++|.|+.|. |+--.|.+- .- .. ..||++.. |.|
T Consensus 180 ai~~-~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQt-G~GRTGk~fA~e~~gV~PDI~tla--K~L 255 (404)
T COG4992 180 AIDE-DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQT-GLGRTGKLFAYEHYGVEPDILTLA--KAL 255 (404)
T ss_pred Hhcc-CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecccc-CCCccchHHHHHHhCCCCCEEEee--ccc
Confidence 9986 67666654 222333322 5788999999999999999997 763333211 00 01 35888755 998
Q ss_pred CCC-CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 012104 247 RGP-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (471)
Q Consensus 247 ~Gp-rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l 325 (471)
.|. ..|.+++++ ++.+.+.......++|| +....|+..++++.+.+++ ..+++.+...+|
T Consensus 256 gGG~PigA~la~~---------------~~~~~~~~G~HgSTfGG-NpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~ 316 (404)
T COG4992 256 GGGFPIGAMLATE---------------EIASAFTPGDHGSTFGG-NPLACAVALAVLEVLLEEG---LLENVREKGEYL 316 (404)
T ss_pred cCCccceeeEEch---------------hhhhcCCCCcccCCCCc-CHHHHHHHHHHHHHHcchh---HHHHHHHHHHHH
Confidence 653 345555554 33333322222222333 3333344445677766654 456667777788
Q ss_pred HHHHHcC--CceEeeCCC-CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 326 GNYLTGK--GYSLVTGGT-ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 326 ~~~L~~~--g~~i~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
.+.|+++ .+.++..-. ...++-+.+.... ...++.+.|.+.|+.+... .++.+|+..|-. +++
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-~a~~~~~~~~~~gvL~~~a---------~~~ViR~~PpL~----i~~ 382 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-RARDIVRALREEGVLVLPA---------GPNVIRFLPPLV----ITE 382 (404)
T ss_pred HHHHHHHhhcCCceeeeecceeEEEEEecCcc-cHHHHHHHHHHCCeEEecC---------CCCeEEecCCcc----CCH
Confidence 8888775 344433211 2334445665422 4678899999999999753 246899976544 458
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~~~ 419 (471)
+++++..+.+.+++...
T Consensus 383 eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 383 EEIDEALDALERALAAA 399 (404)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988753
No 301
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.54 E-value=7.2e-12 Score=128.72 Aligned_cols=328 Identities=16% Similarity=0.060 Sum_probs=172.3
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.+.+++...+.+. . +.....+ +.+ ..+ +++ +++.++.+.+... -.+..+||++|+..++... ....
T Consensus 59 ~~~i~~a~~~~~~~~-~--~~~~~~~-~~~--~~~-~la-~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~r 128 (425)
T PRK08088 59 HPKVVAAVEAQLKKL-S--HTCFQVL-AYE--PYL-ELC-EKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATKR 128 (425)
T ss_pred CHHHHHHHHHHHhhC-C--Ccccccc-CCH--HHH-HHH-HHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhCC
Confidence 788888888776532 1 1110000 011 122 233 4556666543211 3466889999888777643 2334
Q ss_pred CEEEEeCCCCCCcccccccccCCccc-eeccc-----eeEEEeeeecCCCCCCC----HHHHHHHhhh----CCCcEEEE
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKI-SATSI-----YFESLPYKVNSSTGYID----YDKLEEKALD----FRPKLIIC 187 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~-~~~g~-----~~~~~~~~v~~~~~~iD----~~~le~~~~~----~~pklIi~ 187 (471)
.+|++.++.|.|... +.....+... ...+. .+..++++.+. + .++ ++.+++++.. .++..|++
T Consensus 129 ~~iv~~~~~yHG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~-~~~~~~~~~~l~~~l~~~~~~~~~aavi~ 205 (425)
T PRK08088 129 SGVIAFTGAYHGRTH-YTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-H-GVSEDDAIASIERIFKNDAAPEDIAAIII 205 (425)
T ss_pred CeEEEECCccCCccH-HHHHhhCCCCccccCCCCCCCCcEEcCCCccc-c-CccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 567777877755421 1100000000 00000 01111222221 1 122 5568887752 34556665
Q ss_pred c--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC--CccEEEeCCCCcC-CCCCeEEEEeeC
Q 012104 188 G--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE--YCHIVTTTTHKSL-RGPRAGMIFYRK 258 (471)
Q Consensus 188 ~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~--~aDiv~~s~~K~l-~GprgG~i~~~~ 258 (471)
. .+.-|...+ +++|+++|+++|+++|+|++|. |+...|... ++. +.+.-+.|++|++ +|.|.|++++++
T Consensus 206 Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~-~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~ 283 (425)
T PRK08088 206 EPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLF-AMEQMGVAADLTTFAKSIAGGFPLAGVTGRA 283 (425)
T ss_pred CcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchh-HHhhcCCCCCEEEEeccccCCCcceeeEecH
Confidence 4 222233333 6789999999999999999987 653333221 111 2222356778996 566889999987
Q ss_pred CCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc----CCc
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KGY 334 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~----~g~ 334 (471)
++.+.+.........+++ ....++....++.... ++..+++.+..+++.+.|.+ .+.
T Consensus 284 ---------------~~~~~~~~~~~~~t~~~~-~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~ 344 (425)
T PRK08088 284 ---------------EVMDAIAPGGLGGTYAGN-PIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHPE 344 (425)
T ss_pred ---------------HHHhhcCCCCCCCCCCcC-HHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 444444433322233332 2333344445554422 23444444444555444433 232
Q ss_pred -eEeeCCCCCeeEEEEccCC-------CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 335 -SLVTGGTENHLVLWDLRPL-------GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 335 -~i~~~~~~~~~~~v~~~~~-------~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
.-+.+ . ..++|+.+... ......+.+.+.+.||.+.+.. . .++.|||+++... ++++++
T Consensus 345 ~~~v~g-~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~----~---~~~~iRl~~~~~~----t~~ei~ 411 (425)
T PRK08088 345 IGDVRG-L-GAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCG----P---YYNVLRILVPLTI----EDAQIR 411 (425)
T ss_pred eEEEec-c-ceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCC----C---CCCEEEEECCCCc----CHHHHH
Confidence 12222 2 45678877321 1124567777888898875421 1 1368999986433 478999
Q ss_pred HHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTL 418 (471)
Q Consensus 407 ~l~~~i~~~l~~ 418 (471)
+..+.|.+++..
T Consensus 412 ~~i~~l~~~l~~ 423 (425)
T PRK08088 412 QGLEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHHHh
Confidence 999999888764
No 302
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=7.2e-12 Score=127.19 Aligned_cols=312 Identities=16% Similarity=0.108 Sum_probs=174.5
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|+|.+++...+..- ..++. .++ .+.+....+++.+..+.+ -.+.++||++||.+++..+.
T Consensus 54 ~p~v~~a~~~q~~~~-~~~~~--~~~------~~~~~~la~~l~~~~~~~-----~v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 54 NPGMVEALAAQAEKL-INPSP--AFY------NEPMAKLAGLLTQHSCFD-----KVFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CHHHHHHHHHHHHhc-ccccc--ccc------CHHHHHHHHHHhhccCCC-----EEEEeCCcHHHHHHHHHHHHHHhhc
Confidence 799999988776432 11111 111 122222234444444333 24668899999999998763
Q ss_pred -CCC-CEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecC---CCCCCCHHHHHHHhhhCCCcEEEEc--CC
Q 012104 119 -EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNS---STGYIDYDKLEEKALDFRPKLIICG--GS 190 (471)
Q Consensus 119 -~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~---~~~~iD~~~le~~~~~~~pklIi~~--~s 190 (471)
++| .+|+..+..|.|... + .++.++.. +.....+..+ .....|++++++.+. .++.+|++. .+
T Consensus 120 ~~~~r~~ii~~~~~yHG~t~-~-------~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~ 190 (395)
T PRK03715 120 HKNGAYEIITFDHSFHGRTL-A-------TMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG 190 (395)
T ss_pred cCCCCcEEEEECCCcCCChH-H-------HHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence 233 678887755533211 1 12222211 1100000000 012358899998885 356777765 44
Q ss_pred CCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCCCC-CeEEEEeeCCCCC
Q 012104 191 AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLRGP-RAGMIFYRKGPKP 262 (471)
Q Consensus 191 ~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~Gp-rgG~i~~~~~~~~ 262 (471)
..|...+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|++++ .|.|.|. ..|.++++++
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~~~--- 264 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAKAE--- 264 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEccc---
Confidence 4565555 8999999999999999999998 75222321 1 1112 3688665 5998762 3566677764
Q ss_pred CCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC----CceEee
Q 012104 263 PKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK----GYSLVT 338 (471)
Q Consensus 263 ~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~----g~~i~~ 338 (471)
+.. +......+++++ +....++...+++.+.+ .+..+++.++.++|.+.|++. ++.-+.
T Consensus 265 ------------i~~-~~~~~~~~T~~g-~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr 327 (395)
T PRK03715 265 ------------VAV-FEAGDQGGTYNG-NPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER 327 (395)
T ss_pred ------------ccc-ccCCCcCCCCCC-CHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE
Confidence 211 111111122233 23333333345655532 345667777788888887653 443222
Q ss_pred CCCCCeeEEEEccCCCCCHHHHHHHHhhc---CeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 339 GGTENHLVLWDLRPLGLTGNKVEKLCDLC---NITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 339 ~~~~~~~~~v~~~~~~~~~~~~~~~L~~~---gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
+ ...++-+.+... ....+.+.+.+. ||.+... .++.+||..+.. .+++|++++.+.|.++
T Consensus 328 -G-~Glm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~---------~~~~lR~~p~l~----~t~~ei~~~~~~l~~~ 390 (395)
T PRK03715 328 -G-EGLLRALLLGKD--IGPQIVEKARDMQPDGLLLNAP---------RPNLLRFMPALN----VTTEEIDQMIAMLRSV 390 (395)
T ss_pred -c-ceeEEEEEecCc--hHHHHHHHHHhccCCCEEEeec---------CCCEEEEeCCcc----cCHHHHHHHHHHHHHH
Confidence 2 244555666431 234455555555 9998642 135799987654 4589999999999988
Q ss_pred HHH
Q 012104 416 VTL 418 (471)
Q Consensus 416 l~~ 418 (471)
+..
T Consensus 391 l~~ 393 (395)
T PRK03715 391 LDK 393 (395)
T ss_pred HHh
Confidence 763
No 303
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=2.3e-13 Score=133.33 Aligned_cols=212 Identities=18% Similarity=0.169 Sum_probs=143.4
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
|+...+.+| ..++++-|+++ .+.+.||..|...++..|+++||.|++.+..|+|... . ++..
T Consensus 75 ~nPt~~~le----~~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~-------l~~~ 136 (409)
T KOG0053|consen 75 GNPTRDVLE----SGIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--I-------LRKF 136 (409)
T ss_pred CCCchHHHH----HHHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--H-------HHHH
Confidence 456667777 56788889886 3557899999999999999999999999999988632 1 1111
Q ss_pred ccee--EEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccc
Q 012104 151 SIYF--ESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQ 226 (471)
Q Consensus 151 g~~~--~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g 226 (471)
...+ +...+ | .-|++.+++.+.+ ++++|++. .||+..+.|+++++++|+++|+++++|.+.+.+
T Consensus 137 ~~~~gie~~~v--d----~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p----- 204 (409)
T KOG0053|consen 137 LPKFGGEGDFV--D----VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP----- 204 (409)
T ss_pred HHHhCceeeee--c----hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc-----
Confidence 1111 11111 1 1245566666654 68899875 789999999999999999999999999987633
Q ss_pred cCCCCCC-CccEEEeCCCCcCCCCC---eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHH
Q 012104 227 EAANPFE-YCHIVTTTTHKSLRGPR---AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 227 ~~~~p~~-~aDiv~~s~~K~l~Gpr---gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~a 302 (471)
....|++ +||||+.|..|++.|-. +|.++.+.+ ++.+++..... .+.+.++ .+.+. ..
T Consensus 205 ~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~--------------~~~~~l~~~~~-~lg~~~~--p~~~~-ll 266 (409)
T KOG0053|consen 205 YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE--------------ELASRLKFLQE-DLGWCED--PFDLF-LL 266 (409)
T ss_pred cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH--------------HHHHHHHHHHH-HhcCCCC--HHHHH-HH
Confidence 3456777 69999999999998864 577777642 56665543221 1111222 22222 12
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
++-+. .+.-++++..+|+..+++.|++.
T Consensus 267 ~Rglk--tl~lRi~~~~ena~~~A~~Le~~ 294 (409)
T KOG0053|consen 267 SRGLK--TLHLRINKHSENALKIALLLEAH 294 (409)
T ss_pred hcCcc--hhhhhHHHHHHHHHHHHHHhhhC
Confidence 22222 23345667778888889988875
No 304
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.52 E-value=5.2e-12 Score=132.73 Aligned_cols=254 Identities=18% Similarity=0.178 Sum_probs=161.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc--C--C-----C------------------C----
Q 012104 74 FIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--E--P-----H------------------D---- 122 (471)
Q Consensus 74 ~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all--~--p-----G------------------D---- 122 (471)
....+|+.+.+++++++|.+. .||. ++++||.||+.++.+.- + | + |
T Consensus 120 ~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~ 196 (608)
T TIGR03811 120 ATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMD 196 (608)
T ss_pred hHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccc
Confidence 456889999999999999876 4754 46789999987665421 1 0 0 0
Q ss_pred ---------------------------EEEEeCCCCCCcccccccccCCccceecccee-EEEeeeecCCCCCCCHHHHH
Q 012104 123 ---------------------------RIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYKVNSSTGYIDYDKLE 174 (471)
Q Consensus 123 ---------------------------~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~-~~~~~~v~~~~~~iD~~~le 174 (471)
+|+++. ..|+|.. +.+...|.+. .++.+++| +++++|++.|+
T Consensus 197 l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~~------KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L~ 266 (608)
T TIGR03811 197 LLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSWL------KAADIIGIGLDQVIPVPVD-SNYRMDINELE 266 (608)
T ss_pred cccccccchhhhhhhccccccccccceEEEECC---CccHHHH------HHHHHcCCCcccEEEeecC-CCCcCCHHHHH
Confidence 233333 2344321 2334456543 35566777 56899999999
Q ss_pred HHhhhC----CCc-EEE--EcCCCCCccccHHHHHHHH---HHhCC--EEEEeccccchhh---ccc-c---CC------
Q 012104 175 EKALDF----RPK-LII--CGGSAYPRDWDYARFRAVA---DKCGA--LLLCDMAHISGLV---AAQ-E---AA------ 229 (471)
Q Consensus 175 ~~~~~~----~pk-lIi--~~~s~~g~~~d~~~i~~ia---~~~g~--~livD~a~~~glv---~~g-~---~~------ 229 (471)
+.+.+. .|- .|+ +|.+.+|.+-|+++|.++| +++|+ |++||+|++ |.. ... . .|
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyG-G~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYG-GYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeecccc-chhhhhhccccccccccchhhc
Confidence 988632 232 344 4577899999999999998 66887 699999997 532 100 0 00
Q ss_pred -----------------------CCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCCCCCCCCCCCcccchHhhhhh----
Q 012104 230 -----------------------NPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPKPPKKGQPEGAVYDFEDKINF---- 281 (471)
Q Consensus 230 -----------------------~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~---- 281 (471)
..++.+|-++..+||++.-|-+ |++++++. .+.+.+..
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~--------------~~~~~~~~~a~Y 411 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI--------------RMRDVISYFATY 411 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH--------------HHHHHHhcCcch
Confidence 1235799999999999777754 88888874 11111100
Q ss_pred -----cCCC------CCCCCCcHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHHHcCC-------ceE--eeC
Q 012104 282 -----AVFP------SLQGGPHNHQIGALAVALKQA--STPAFKAYAKQVKANAVALGNYLTGKG-------YSL--VTG 339 (471)
Q Consensus 282 -----~~~~------~~~g~p~~~~iaa~a~al~~~--~~~~~~~~~~~~~~na~~l~~~L~~~g-------~~i--~~~ 339 (471)
...| +..|+..-...+++..+++.+ ...++.++.++..++++++.+.|++.+ +++ +.+
T Consensus 412 l~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~ 491 (608)
T TIGR03811 412 VFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTK 491 (608)
T ss_pred hccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCC
Confidence 0011 122332223445566677776 566899999999999999999998743 444 333
Q ss_pred CCCCeeEEEEccCCCCC
Q 012104 340 GTENHLVLWDLRPLGLT 356 (471)
Q Consensus 340 ~~~~~~~~v~~~~~~~~ 356 (471)
.+.+++.+.+.+.|.+
T Consensus 492 -pdlniV~Fr~~~~g~~ 507 (608)
T TIGR03811 492 -PDFNMVDYVFNEKGND 507 (608)
T ss_pred -CCcceEEEEEecCCCc
Confidence 3455666666665643
No 305
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.52 E-value=9.4e-12 Score=127.50 Aligned_cols=329 Identities=13% Similarity=0.081 Sum_probs=176.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++...+.... +.....+. .+ ...+++ +++.+++...... -.+..+||++|+.+++... ...
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~~-~~---~~~~la-~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK09792 57 RHPDLVAAVEQQLQQFT---HTAYQIVP-YE---SYVTLA-EKINALAPVSGQA--KTAFFTTGAEAVENAVKIARAHTG 126 (421)
T ss_pred CCHHHHHHHHHHHHhcc---CcccCccC-CH---HHHHHH-HHHHHhCCCCCCc--eEEEeCChHHHHHHHHHHHHHhcC
Confidence 37889988887765421 11111111 11 112233 4455665421101 2355679999999888654 223
Q ss_pred CCEEEEeCCCCCCcccccccccCCccc-eecc-----ceeEEEeeeecCCCCC---CCHHHHHHHhhh----CCCcEEEE
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKI-SATS-----IYFESLPYKVNSSTGY---IDYDKLEEKALD----FRPKLIIC 187 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~-~~~g-----~~~~~~~~~v~~~~~~---iD~~~le~~~~~----~~pklIi~ 187 (471)
..+|+...-.|.|.-. +.....+... ...+ ..+..++++.+. ++. -|.+.+++.+.+ .++..|++
T Consensus 127 r~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~iaavi~ 204 (421)
T PRK09792 127 RPGVIAFSGGFHGRTY-MTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQVAAIIF 204 (421)
T ss_pred CCeEEEECCCcCCccH-HHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCceEEEEE
Confidence 4578888866654311 1100000000 0000 012223333221 110 135788887763 34567776
Q ss_pred c--CCCCCccc-c---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----CccEEEeCCCCcCC-CCCeEEEEe
Q 012104 188 G--GSAYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTTTTHKSLR-GPRAGMIFY 256 (471)
Q Consensus 188 ~--~s~~g~~~-d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aDiv~~s~~K~l~-GprgG~i~~ 256 (471)
. +++.|... + +++|+++|+++|+++|+|+++. |+-..|.. .++. ..|++ +++|+|. |.+.|++++
T Consensus 205 EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~-~a~~~~~~~pDi~--t~gK~l~~G~pigav~~ 280 (421)
T PRK09792 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQS-GFARTGKL-FAMDHYADKPDLM--TMAKSLAGGMPLSGVVG 280 (421)
T ss_pred ccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCch-hHHHhcCCCCcEE--EeehhhcCCCceEEEEE
Confidence 5 55666544 5 6788999999999999999987 66444432 1211 35764 5579974 567888888
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GY 334 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~ 334 (471)
++ ++.+.+......+.+++......++++ .++.+.++ +..+++.+..+++.+.|++. .+
T Consensus 281 ~~---------------~i~~~~~~~~~~~T~~gnpl~~aaa~a-~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~ 341 (421)
T PRK09792 281 NA---------------NIMDAPAPGGLGGTYAGNPLAVAAAHA-VLNIIDKE---SLCERANQLGQRLKNTLIDAKESV 341 (421)
T ss_pred cH---------------HHHhccCCCCcCCCCCCCHHHHHHHHH-HHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77 344433322222233333333333333 45544332 34455555556666655442 12
Q ss_pred eEeeCCCC-CeeEEEEccCCC------CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 335 SLVTGGTE-NHLVLWDLRPLG------LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 335 ~i~~~~~~-~~~~~v~~~~~~------~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
..+....+ ..++++.+.... .....+...+.++||.+.+. + + ..+.|||..+.. ++++++++
T Consensus 342 p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---g---~-~~~~irl~P~l~----i~~~ei~~ 410 (421)
T PRK09792 342 PAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC---G---A-YGNVIRFLYPLT----IPDAQFDA 410 (421)
T ss_pred CCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec---C---C-CCCEEEEeCCCc----CCHHHHHH
Confidence 21222222 456778875321 12345667777899998421 1 1 247899987553 34899999
Q ss_pred HHHHHHHHHH
Q 012104 408 IGEFLHRAVT 417 (471)
Q Consensus 408 l~~~i~~~l~ 417 (471)
+.+.+.+++.
T Consensus 411 ~~~~l~~~l~ 420 (421)
T PRK09792 411 AMKILQDALS 420 (421)
T ss_pred HHHHHHHHHh
Confidence 9999988774
No 306
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=2.6e-11 Score=124.81 Aligned_cols=329 Identities=16% Similarity=0.051 Sum_probs=177.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+|+...+.+... .+..++. .+ ...+++ +++.+++....+ -...+.|||+|+.+++... ...
T Consensus 58 ~~p~v~~Ai~~ql~~~~~---~~~~~~~-~~---~~~~la-~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~tg 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLIH---YTPIYGF-PV---EPLLLA-EKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYTK 126 (443)
T ss_pred CCHHHHHHHHHHHHhccC---ccccccC-cH---HHHHHH-HHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhcC
Confidence 368999988877754311 1111111 11 112233 456666654322 2355789999999888743 233
Q ss_pred CCEEEEeCCCCCCcccccccccCCcc-cee--cc--ceeEEEeeeec-CCCCC--------CCHHHHHHHhhh----CCC
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKK-ISA--TS--IYFESLPYKVN-SSTGY--------IDYDKLEEKALD----FRP 182 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~-~~~--~g--~~~~~~~~~v~-~~~~~--------iD~~~le~~~~~----~~p 182 (471)
..+|+...-.|.|.-. +.....|.. ... .+ .....++++-. ...+. -+.+.+++++.. .++
T Consensus 127 r~~ii~~~~~yHG~t~-~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 127 RRKILSYLRSYYGSTY-GAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred CCeEEEEeCCcCCcCH-HHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 4678877755544310 100000000 000 00 01112222100 00000 234556666642 346
Q ss_pred cEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcCC-CCCeE
Q 012104 183 KLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLR-GPRAG 252 (471)
Q Consensus 183 klIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l~-GprgG 252 (471)
+.|++. .+++|...+ +++++++|+++|+++|+|++|. |+...|.... .+. ..|+++ ++|++. |.+.|
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiit--lsK~l~~G~pig 282 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIIT--LGKPLGGGLPIS 282 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEE--ecccccCCceeE
Confidence 777765 466776554 6788999999999999999997 6544443211 112 357775 489974 55789
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
++++++ ++.+.+......+..+++... .++...+++.+.++ +..+++.++.++|.+.|++.
T Consensus 283 av~~~~---------------~i~~~~~~~~~~~T~~~~p~~-~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l 343 (443)
T PRK08360 283 ATIGRA---------------EIMDSLPPLAHAFTLSGNPVA-SAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEM 343 (443)
T ss_pred EEEEcH---------------HHHhhhcCCCCCCCCCcCHHH-HHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHH
Confidence 998886 444444332222233333333 33333456655432 34566666777777777653
Q ss_pred --CceEee--CCCCCeeEEEEccCCC----CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 333 --GYSLVT--GGTENHLVLWDLRPLG----LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 333 --g~~i~~--~~~~~~~~~v~~~~~~----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
.+.++. .+. ..++-+++.... .+ ...+...|.++||.+.+. ..+.+|+..+.. ++
T Consensus 344 ~~~~~~v~~vrg~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lr~~P~l~----~t 409 (443)
T PRK08360 344 KKKHELIGDVRGI-GLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------SGNVLRIQPPLT----IE 409 (443)
T ss_pred HHhCCCeeeeecc-ceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------CCCEEEEeCCCC----CC
Confidence 233221 122 223344443211 11 234667788899998542 136799987554 35
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~ 419 (471)
++|++++.+.+.+++...
T Consensus 410 ~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 410 KEVLDEGLDILEEAIEDV 427 (443)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999998754
No 307
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.50 E-value=2.4e-12 Score=123.19 Aligned_cols=330 Identities=17% Similarity=0.170 Sum_probs=200.3
Q ss_pred cCCCCC----cHHHHHHHhhhhhccCCCCCCCCC-CCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHH
Q 012104 38 ASENFT----SFAVIEALGSALTNKYSEGMPGNR-YYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFA 112 (471)
Q Consensus 38 ~s~n~~----s~~v~~a~~~~l~~~~~~g~~~~r-~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~ 112 (471)
+|.||. ++.+.+.....+ .+|.-|..|.| |||.-+..-.+| +++++++|++. .+..+-|-.++..
T Consensus 100 aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~-----aivYs~gF~ti~S 169 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTED-----AIVYSYGFSTIES 169 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcc-----eeeeccccchhhh
Confidence 577775 577777766555 56777888877 776555554566 68899999986 3556677888899
Q ss_pred HHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhC------CCc---
Q 012104 113 AYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDF------RPK--- 183 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~------~pk--- 183 (471)
++.|+.+.||.|.+..-.+.+.. +.++.+. -.+..+ .+.|++.++....+. +||
T Consensus 170 ~ipafsKrGDIi~~de~~nfaIq---------~GlqlSR--S~i~~F------khndm~~lerll~E~~~~~~K~~k~~~ 232 (467)
T KOG1358|consen 170 AIPAFSKRGDIIFVDEAVNFAIQ---------KGLQLSR--STISYF------KHNDMEDLERLLPEQEDEDQKNPKKAL 232 (467)
T ss_pred cchhhhccCcEEEEehhhhHHHH---------HHHhhhh--heeEEe------cCCCHHHHHHhccCcchhhhhcccccc
Confidence 99999999999998874332211 1111111 022233 356888888776431 122
Q ss_pred ---EEEE-c-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhcc---cc--CC-CCCCCccEEEeCCCCcCCCCCeE
Q 012104 184 ---LIIC-G-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAA---QE--AA-NPFEYCHIVTTTTHKSLRGPRAG 252 (471)
Q Consensus 184 ---lIi~-~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~---g~--~~-~p~~~aDiv~~s~~K~l~GprgG 252 (471)
.|++ + .-++|..+|+.+|.++..++...++.|++.+.|..+. |. ++ .|....|++++|..-+|.+ .||
T Consensus 233 ~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas-~Gg 311 (467)
T KOG1358|consen 233 TRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS-GGG 311 (467)
T ss_pred ceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc-cCc
Confidence 3333 3 6689999999999999999999999999999887764 21 22 2334678999998877743 567
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK 332 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~ 332 (471)
+.+++.-+ -..+++....+-..-+-|.....||. .++.... +-.+..+.+++....+-+.|+..
T Consensus 312 Fc~G~~~i-------------~~hQrLSg~~Y~fSAslPp~la~aa~-~ai~i~~--~~p~~~~~L~~k~~~~H~~l~~~ 375 (467)
T KOG1358|consen 312 FCAGKSFI-------------ADHQRLSGSGYCFSASLPPYLAGAAI-KAILIEE--WNPEIVQPLRAKVAKFHAALSSN 375 (467)
T ss_pred eeecceee-------------EeeeeccccceeeeccCchhhhhhHH-HHHHHHh--hCcchhhhhhccccccchhhhcC
Confidence 77764311 11122322111111122332222222 1222111 11234555666666677777765
Q ss_pred -CceEeeCCCCCeeEEEEccCCCCCHHH--------HHHHHhhcCeEeccCCcC-CCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 333 -GYSLVTGGTENHLVLWDLRPLGLTGNK--------VEKLCDLCNITVNKNAVF-GDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 333 -g~~i~~~~~~~~~~~v~~~~~~~~~~~--------~~~~L~~~gI~v~~~~~p-~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
|+.+ ++...+.++.+.+.....+.++ +.+.+.+ |+.+.....- .......+..|||.+ +.++++
T Consensus 376 s~~~v-~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~----~a~~se 449 (467)
T KOG1358|consen 376 SGFIV-SGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICV----SAGMSE 449 (467)
T ss_pred CceEE-ecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEE----eCCCCH
Confidence 6776 4445566666666543222221 2333344 7766554322 222222356899976 457889
Q ss_pred HHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVT 417 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~ 417 (471)
+|++++++.|++...
T Consensus 450 eel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 450 EELERAAELIKEVAS 464 (467)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988654
No 308
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=3.2e-11 Score=124.26 Aligned_cols=330 Identities=15% Similarity=0.086 Sum_probs=176.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++...+.. ...+..+.+. .+.. .++ .+++++++.-..+ ..+.++||++||.+++... ...
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~~~---~~~~---~~l-a~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tg 128 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGVIY---YESI---LKL-AEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTK 128 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCccccccC---CHHH---HHH-HHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 368999998877643 2212111111 1222 222 3567777731111 3455689999999998753 223
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceecc------ceeEEEeeeec---CCC------CCCCHHHHHHHhhh----CC
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATS------IYFESLPYKVN---SST------GYIDYDKLEEKALD----FR 181 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g------~~~~~~~~~v~---~~~------~~iD~~~le~~~~~----~~ 181 (471)
..+|+..+-.|.|... +.....+....... ..+..++++-. +.. ...|+++++++++. .+
T Consensus 129 r~~ii~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 129 RPYIISFTGCFHGRTL-GALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred CCeEEEECCCcCCcCH-HHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 4678877754433210 10000000000000 00111222100 000 00256777777653 23
Q ss_pred CcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCC-CCCe
Q 012104 182 PKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRA 251 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~-Gprg 251 (471)
+..|++. .+..|...+ +++++++|++||+++|+|++|. |+...|..- ..+. ..|+ .|++|.|. |.+.
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~lg~G~pi 284 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGIASGLPL 284 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhccCCCcc
Confidence 4566654 455566666 8999999999999999999998 764444321 1111 2465 57789985 4567
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
|++++++ ++.+.+......+..++ +....++...+++.+..+ ...+++.++.++|++.|.+
T Consensus 285 gav~~~~---------------~i~~~~~~~~~~~T~~~-np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 345 (433)
T PRK08117 285 SAVVASK---------------ELMEQWPLGSHGTTFGG-NPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEV 345 (433)
T ss_pred eeEEEcH---------------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHH
Confidence 8888876 34443432222222333 333444444566655332 3455666667777777765
Q ss_pred CC--ceEee--CCCCCeeEEEEccCCC-----CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 332 KG--YSLVT--GGTENHLVLWDLRPLG-----LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 332 ~g--~~i~~--~~~~~~~~~v~~~~~~-----~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
.. +.++. .+. ..++.+.+.... .....+.+.|.+.||.+.+. +. ..+.+|+..+... ++
T Consensus 346 l~~~~~~~~~vrg~-Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~----~~~~lRl~p~~~~----t~ 413 (433)
T PRK08117 346 LKEKHPVIGDVRGI-GLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC---GN----AGNVLRMIPPLTV----TK 413 (433)
T ss_pred HHhcCCceeeeecC-CcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec---CC----CCCEEEEeCCccC----CH
Confidence 42 22211 112 223445553211 11234667788899988542 11 1368999876544 48
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVTL 418 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~~ 418 (471)
++++++.+.|.++++.
T Consensus 414 ~~i~~~~~~l~~~l~~ 429 (433)
T PRK08117 414 EEIDEGLDILDEALTE 429 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988754
No 309
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.49 E-value=6.1e-11 Score=120.84 Aligned_cols=320 Identities=18% Similarity=0.169 Sum_probs=175.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+-.. .+..++ ++. .+ ++ .+++.+++.... -...++||++|+.+++....
T Consensus 57 ~~p~v~~ai~~q~~~~~~---~~~~~~--~~~--~~-~l-a~~L~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~~ 123 (408)
T PRK04612 57 NDPDLVAALTEQAGKLWH---TSNVFY--SAP--PL-KL-AEELVTASRFAE----KVFLCNSGTEANEAAIKLVRKWAS 123 (408)
T ss_pred CCHHHHHHHHHHHHhccc---cccccC--CHH--HH-HH-HHHHHhhCCCCC----EEEEcCchHHHHHHHHHHHHHHHH
Confidence 368999988877754221 111111 111 11 12 245555553211 24567899999998886432
Q ss_pred --C--C-CCEEEEeCCCCCCcccccccccCCccceeccc-----eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc
Q 012104 119 --E--P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-----YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (471)
Q Consensus 119 --~--p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-----~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~ 188 (471)
+ + ..+|+...-.|.|.-. + .++.++. .+...+.++. .-...|++.+++.+...++.+|++.
T Consensus 124 ~~g~~~~r~~ii~~~~~yHG~t~-~-------~~s~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~aavi~e 194 (408)
T PRK04612 124 SQGRPADKRVIVTFRGSFHGRTL-A-------AVTATAQPKYQEGYEPLPGGFR-YVDFNDVEALEAAMAGGDVAAVMLE 194 (408)
T ss_pred hhCCCCCCcEEEEECCCcCCccH-H-------HHHhcCCcccccCCCCCCCCce-EcCCCCHHHHHHhhCCCCEEEEEEC
Confidence 1 2 2468888866544311 1 1111111 0110000000 0012478999988864456677765
Q ss_pred C-CCCCcccc-----HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCC-CCCeEEEEeeCCC
Q 012104 189 G-SAYPRDWD-----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLR-GPRAGMIFYRKGP 260 (471)
Q Consensus 189 ~-s~~g~~~d-----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~-GprgG~i~~~~~~ 260 (471)
+ .+.|..++ +++|+++|+++|+++|+|++|. |+-..|....... +....+.|++|.+. |.+.|++++++
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~-- 271 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP-- 271 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH--
Confidence 2 22332222 6799999999999999999997 6544342111011 22233455679974 45678888776
Q ss_pred CCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEee
Q 012104 261 KPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVT 338 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~ 338 (471)
++.+.+......+..+++ ....++...+++.+.+ .+..++..++.++|.+.|++. .+.++.
T Consensus 272 -------------~~~~~~~~~~~~~t~~~~-p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~ 334 (408)
T PRK04612 272 -------------KVAETMQFGAHGTTFGGN-PLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFA 334 (408)
T ss_pred -------------HHHhhhcCCCcCCCCCCC-HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCee
Confidence 344444332222333433 3333444445655533 245666777777777777664 222221
Q ss_pred --CCCCCeeEEEEccCC-CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 339 --GGTENHLVLWDLRPL-GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 339 --~~~~~~~~~v~~~~~-~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.+. ..++-+.+.+. .-....+.+.|.+.||.+.+. ..+.+|+.++.. .+++|++++.+.+.++
T Consensus 335 ~vrg~-Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~---------g~~~lRl~Ppl~----it~eeid~~l~~l~~~ 400 (408)
T PRK04612 335 QVRGR-GLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA---------GPDVLRFVPALN----LTDAELADGLARLRLA 400 (408)
T ss_pred eeecc-ceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC---------CCCEEEEcCCcc----CCHHHHHHHHHHHHHH
Confidence 122 23444555321 112456778888999998542 236899976543 5589999999999998
Q ss_pred HHH
Q 012104 416 VTL 418 (471)
Q Consensus 416 l~~ 418 (471)
+..
T Consensus 401 l~~ 403 (408)
T PRK04612 401 LAD 403 (408)
T ss_pred HHH
Confidence 864
No 310
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=2.5e-11 Score=124.66 Aligned_cols=326 Identities=15% Similarity=0.092 Sum_probs=174.7
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.|.+++.+.+..-.. .... .+. ++ ..+++ .+++.+++.-..+ -...+.||++|+.+++....
T Consensus 60 ~p~v~~ai~~q~~~~~~-~~~~-~~~--~~---~~~~l-a~~l~~~~p~~~~---~v~f~~sGseA~e~A~klar~~~~~ 128 (423)
T PRK05964 60 HPYIDQAIREQLDRLDH-VIFA-GFT--HE---PAERL-AQRLVALTPGGLD---HVFFSDSGSVAVEVALKMALQYWRN 128 (423)
T ss_pred CHHHHHHHHHHHhhCCC-cccc-ccC--CH---HHHHH-HHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 68999988877643210 0000 011 11 11223 3556666642111 23557899999999887531
Q ss_pred -C-C-CCEEEEeCCCCCCcccccccccCCccce---eccc--eeEEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc
Q 012104 119 -E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKIS---ATSI--YFESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG 188 (471)
Q Consensus 119 -~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~---~~g~--~~~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~ 188 (471)
. + ..+|+...-.|.|... +.....+.... ..+. ....++++.+ +....+.+.+++.+.+. +...|++.
T Consensus 129 ~~~~~r~~ii~~~~~yHG~t~-~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~iaavi~E 206 (423)
T PRK05964 129 RGEPGRSRFLSLRGGYHGDTI-GTMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEIAAFIVE 206 (423)
T ss_pred cCCCCCcEEEEEcCCcCCccH-HHHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 1 2 3689888866654311 11000000000 0000 0112222211 00112278888888643 23455544
Q ss_pred C---CCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCCCC--CeEEEEe
Q 012104 189 G---SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLRGP--RAGMIFY 256 (471)
Q Consensus 189 ~---s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~Gp--rgG~i~~ 256 (471)
+ ...|...+ +++++++|+++|+++|+|++|. |+...|.. . .... ..|+++. .|+|.|+ +.|++++
T Consensus 207 p~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p~~av~~ 283 (423)
T PRK05964 207 PLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIAT-GFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLPLAATLC 283 (423)
T ss_pred cccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhHHHhcCCCCCeeee--ehhhhcCcccceEEEE
Confidence 2 23444432 6789999999999999999995 65333321 1 1111 3577654 5998654 5677777
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhc------CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~------~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
++ ++.+.+... .+.+.++ .+....++..++++.+.. ..+.+++.++.+++.+.|+
T Consensus 284 ~~---------------~i~~~~~~~~~~~~~~~~~T~~-~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~ 344 (423)
T PRK05964 284 TA---------------EIFEAFYSDDRAKAFMHSPSYT-ANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLE 344 (423)
T ss_pred cH---------------HHHHhhhcCCcccccccCCCCC-cCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 76 444444211 1111122 233344444455665433 2355677777788888877
Q ss_pred cC-CceEeeC-CCCCeeEEEEccCCC--CCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 331 GK-GYSLVTG-GTENHLVLWDLRPLG--LTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 331 ~~-g~~i~~~-~~~~~~~~v~~~~~~--~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
+. ++..+.. ...+.++.+.+.... .....+.+.|.++||.+.+. .+.+||+.+... +++|++
T Consensus 345 ~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~----------~~~lR~~p~l~~----t~edId 410 (423)
T PRK05964 345 PFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL----------GNTIYLMPPYII----TAEELD 410 (423)
T ss_pred hhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec----------CCEEEEeCCccc----CHHHHH
Confidence 65 3332211 112334455554321 01456788888999998642 247999876554 489999
Q ss_pred HHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTL 418 (471)
Q Consensus 407 ~l~~~i~~~l~~ 418 (471)
++.+.+++++++
T Consensus 411 ~~v~~l~~al~~ 422 (423)
T PRK05964 411 RITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHhh
Confidence 999999988753
No 311
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=2.9e-11 Score=124.25 Aligned_cols=328 Identities=16% Similarity=0.146 Sum_probs=180.2
Q ss_pred CCeeEecCC--C---CCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhc-CCCCCCCceeeecCC
Q 012104 32 RGIELIASE--N---FTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTF-HLDPTQWGVNVQPYS 105 (471)
Q Consensus 32 ~~i~li~s~--n---~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lf-g~~~~~~~~~v~~~s 105 (471)
..|++..+. . +.+|.|.+++...+.+.. + ++...+ ...++ .+++.+++ +.+ -...+.|
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~--~-----~~~~~~---~~~~l-a~~L~~~~~~~~-----~v~~~~s 114 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGL--S-----FGAPTE---LEVEL-AELVIELVPSIE-----MVRMVNS 114 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHHHhCC--c-----CCCCCH---HHHHH-HHHHHHhCCCCC-----EEEEecC
Confidence 456666543 2 457899999888775521 1 111111 11223 35566655 322 2355789
Q ss_pred hHHHHHHHHHHhc--CCCCEEEEeCCCCCCcccccccccCCcc-ce----eccceeEEE---eeeecCCCCCCCHHHHHH
Q 012104 106 GSPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKK-IS----ATSIYFESL---PYKVNSSTGYIDYDKLEE 175 (471)
Q Consensus 106 Gt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~-~~----~~g~~~~~~---~~~v~~~~~~iD~~~le~ 175 (471)
|++|+..++.... ..+++|+..+..|.|+. .+.....|.. .. ..+.....+ .+.+ ...|++++++
T Consensus 115 GseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~ 189 (426)
T PRK00062 115 GTEATMSAIRLARGYTGRDKIIKFEGCYHGHA-DSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEE 189 (426)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEcCccCCch-hhhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHH
Confidence 9999999998753 33689999998886652 0110000000 00 000000000 0111 1248899998
Q ss_pred HhhhC--CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCCCC-CccEEEeCCCCc
Q 012104 176 KALDF--RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE-YCHIVTTTTHKS 245 (471)
Q Consensus 176 ~~~~~--~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p~~-~aDiv~~s~~K~ 245 (471)
.+... ++..|++. .+..|...+ +++|+++|+++|+++|+|++|. |+..++.. ..-+. ..|+ .+++|.
T Consensus 190 ~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK~ 266 (426)
T PRK00062 190 LFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGKI 266 (426)
T ss_pred HHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--HhhhhH
Confidence 88642 44566655 556677777 8899999999999999999997 77332111 11111 2465 456799
Q ss_pred CC-CCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhh--cCCC-CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 012104 246 LR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF--AVFP-SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (471)
Q Consensus 246 l~-GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~--~~~~-~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~n 321 (471)
+. |.+.|++++++ ++.+.+.. ..+. ...+++ ....++...+++.+... ++.+++.++
T Consensus 267 l~~G~p~ga~~~~~---------------~i~~~~~~~~~~~~~~T~~~~-p~~~aaa~a~L~~~~~~---~~~~~~~~~ 327 (426)
T PRK00062 267 IGGGLPVGAFGGRR---------------EIMEQLAPLGPVYQAGTLSGN-PLAMAAGLATLKLLKEP---GFYEELEAL 327 (426)
T ss_pred hhCCCcceeeeEHH---------------HHHHhhccCCCceecccCcCC-HHHHHHHHHHHHHHhcc---hHHHHHHHH
Confidence 75 44577777776 45554431 1111 122333 33334444456655432 355666666
Q ss_pred HHHHHHHHHc----CCceEeeCCCCCeeEEEEccCCCC---------C---HHHHHHHHhhcCeEeccCCcCCCCCCCCC
Q 012104 322 AVALGNYLTG----KGYSLVTGGTENHLVLWDLRPLGL---------T---GNKVEKLCDLCNITVNKNAVFGDSSALAP 385 (471)
Q Consensus 322 a~~l~~~L~~----~g~~i~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~ 385 (471)
.+++++.|++ .++..-..+. ..++-+.+.+... + ...+...|.++||.+.+.. .
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~vrg~-G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~---------~ 397 (426)
T PRK00062 328 TKRLAEGLKEAAKKAGIPLTVNRV-GSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ---------F 397 (426)
T ss_pred HHHHHHHHHHHHHHcCCceEEEEe-cceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC---------c
Confidence 6777666653 3544311122 2233333322111 1 2357778888999986531 1
Q ss_pred CeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 386 GGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 386 ~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+.+|+.. -++++|++++.+.+.+++..
T Consensus 398 ~~~~~~~------~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 398 EAGFVSA------AHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred Cceeeec------cCCHHHHHHHHHHHHHHHHh
Confidence 2356542 24589999999999888753
No 312
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.46 E-value=1.5e-10 Score=120.72 Aligned_cols=320 Identities=14% Similarity=0.094 Sum_probs=169.3
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-CCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
.|.|.+++...+.. +..... .+....+...+ + .+++.+++. .+.+ -...++||++||.+++....
T Consensus 107 hp~v~~Av~~ql~~-~~~~~~--~~~~~~~~~~~---l-ae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~~~ 176 (504)
T PLN02760 107 EPRLVAAATEQLNK-LPFYHS--FWNRTTKPSLD---L-AKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYYNN 176 (504)
T ss_pred CHHHHHHHHHHHhh-ccceec--ccccCcHHHHH---H-HHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHHHH
Confidence 78999998887743 211111 00011222222 2 245556643 2221 23557899999999988652
Q ss_pred ---CCC-CEEEEeCCCCCCcccccccccCCccceeccce------------eEEEeeeec-----CCCC-----CCCHHH
Q 012104 119 ---EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY------------FESLPYKVN-----SSTG-----YIDYDK 172 (471)
Q Consensus 119 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~------------~~~~~~~v~-----~~~~-----~iD~~~ 172 (471)
.+| .+|+..+-.|.|.. .+ .++.+|.. +...+++-. +... ...+++
T Consensus 177 ~~g~~~r~~iI~~~~~yHG~t-~~-------a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 248 (504)
T PLN02760 177 ALGRPNKKKFIARSKSYHGST-LI-------SASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADN 248 (504)
T ss_pred hcCCCCCcEEEEECCCccCCh-Hh-------hhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHH
Confidence 133 67888876554431 11 11122210 111111100 0000 011355
Q ss_pred HHHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEe
Q 012104 173 LEEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (471)
Q Consensus 173 le~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~ 240 (471)
+++++... ++..|++. ....|...+ +++++++|+++|+++|+|++|. |+--.|..- .-+. ..|++++
T Consensus 249 le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~T-GfGRtG~~~a~e~~gv~PDivtl 327 (504)
T PLN02760 249 LENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVIC-AFGRLGTMFGCDKYNIKPDLVSL 327 (504)
T ss_pred HHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhh-CCcccchhhHHHhcCCCCcEEEe
Confidence 77766422 34455654 344566666 8999999999999999999994 431112110 0011 3687665
Q ss_pred CCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-------CCCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 241 TTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 241 s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-------~~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
.|.|.|. ..|.+++++ ++.+.+... ...+++++. +...++..++++.+.++
T Consensus 328 --gK~lggG~~PigAv~~~~---------------~i~d~~~~~~~~~~~~~h~~T~~gn-Pl~~Aaala~Le~i~~~-- 387 (504)
T PLN02760 328 --AKALSSAYMPIGAVLVSP---------------EISDVIHSQSNKLGSFAHGFTYSGH-PVSCAVALEALKIYKER-- 387 (504)
T ss_pred --cccccCCccccceEeecH---------------HHHhhhhcccccccCcccCCCCCCC-HHHHHHHHHHHHHHHhC--
Confidence 5998762 244466666 343333211 112233443 33333333456655432
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-----C--C---HHHHHHHHhhcCeEeccCCcCC
Q 012104 312 KAYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-----L--T---GNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-----~--~---~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
+..+++.++.++|++.|++. ...++. .+.+ .++-+.+.... . + ...+.+.|.++||.+.+.
T Consensus 388 -~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---- 461 (504)
T PLN02760 388 -NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG-LILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA---- 461 (504)
T ss_pred -CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc-eEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec----
Confidence 45677777778888877654 222221 1222 23344443211 0 0 234667778899998542
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
...+|++.+.. ++++|++++.+++.+++..
T Consensus 462 ------g~~lrl~Ppl~----it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 462 ------GDNIMMSPPLI----ITPEEVDELISIYGKALKA 491 (504)
T ss_pred ------CCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 24689986544 3589999999999988764
No 313
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=2.5e-10 Score=117.76 Aligned_cols=322 Identities=15% Similarity=0.063 Sum_probs=175.1
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---cC-
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---LE- 119 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---l~- 119 (471)
.|.|.+|+...+..-.. . .+++. .+ ...++ .+++.+++....+ ....+.|||+|+.+++... ..
T Consensus 100 ~p~v~~Ai~~ql~~l~~---~-~~~~~-~~---~~~~l-ae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~~ 167 (459)
T PRK11522 100 NPVVVSAVQNQLAKQPL---H-SQELL-DP---LRAML-AKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQSP 167 (459)
T ss_pred CHHHHHHHHHHHhhCcc---c-ccccC-CH---HHHHH-HHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhcc
Confidence 68999998877643211 1 12211 11 12222 3456666543221 2355789999999988743 21
Q ss_pred CC-CEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCCC---CCCCHHHHHHHhhh-----CCCcEEEEc-
Q 012104 120 PH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSST---GYIDYDKLEEKALD-----FRPKLIICG- 188 (471)
Q Consensus 120 pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~~---~~iD~~~le~~~~~-----~~pklIi~~- 188 (471)
.| .+|+...-.|.|.-. + .++.++.. +..-..+..+.. ...|.+++++.+.. .++..|++.
T Consensus 168 ~gr~~ii~~~~~yHG~t~-~-------~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEp 239 (459)
T PRK11522 168 RGKFTFIATSGAFHGKSL-G-------ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEP 239 (459)
T ss_pred CCCcEEEEecCCCCCCcH-H-------HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEec
Confidence 22 468887755544311 1 11222211 110000000000 12378888887753 123355544
Q ss_pred -CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCCCC--CeEEEEeeC
Q 012104 189 -GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRK 258 (471)
Q Consensus 189 -~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~Gp--rgG~i~~~~ 258 (471)
.+..|...+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|+++ +.|.|.|. ..|.+++++
T Consensus 240 v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pigav~~~~ 316 (459)
T PRK11522 240 IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQT-GMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIGATIATE 316 (459)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEecccee-cCCccchhhhhhccCCCCCEEE--echhhhCCCccceeEEEcH
Confidence 445566666 7899999999999999999995 65222321 0 0111 368875 56998752 244444544
Q ss_pred CCCCCCCCCCCCcccchHhhhhhc--CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GY 334 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~--~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~ 334 (471)
++.+.+... .+.+++++. ....++..++++.+.++ +..+++.++.++|.+.|++. .+
T Consensus 317 ---------------~i~~~~~~~~~~~~~T~~gn-p~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~ 377 (459)
T PRK11522 317 ---------------EVFSVLFDNPFLHTTTFGGN-PLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREY 377 (459)
T ss_pred ---------------HHHHHhccCCcccCCCCCCC-HHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhC
Confidence 333333211 122223333 33333333467766543 45667777788888888764 23
Q ss_pred e-EeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 335 S-LVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 335 ~-i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
. ++.. .....++-+.+.... ....+.+.|.++||.+.+.. + ..+.+|+..+.. ++++|++++.+.+
T Consensus 378 ~~~i~~VrG~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~-~------~~~~lr~~Ppl~----~t~~~id~~l~~l 445 (459)
T PRK11522 378 PDLVQEARGKGMLMAIEFVDNE-IGYNFASEMFRQRVLVAGTL-N------NAKTIRIEPPLT----LTIEQCEQVLKAA 445 (459)
T ss_pred CCceeeEEeceeEEEEEecCch-HHHHHHHHHHHCCeEEEecC-C------CCCEEEEECCcc----CCHHHHHHHHHHH
Confidence 2 2111 012334555664321 24557777888999986421 1 236899987554 4589999999999
Q ss_pred HHHHHHH
Q 012104 413 HRAVTLT 419 (471)
Q Consensus 413 ~~~l~~~ 419 (471)
.+++...
T Consensus 446 ~~~l~~~ 452 (459)
T PRK11522 446 RKALAAM 452 (459)
T ss_pred HHHHHHH
Confidence 9988754
No 314
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.44 E-value=1.2e-10 Score=119.49 Aligned_cols=319 Identities=16% Similarity=0.072 Sum_probs=171.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---c--
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---L-- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---l-- 118 (471)
.|.|.+|+...+.+-.. . .+++. .+. ..++ .+++.+++....+ ....++|||+|+.+++... .
T Consensus 93 hp~v~~Av~~ql~~l~~---~-~~~~~-~~~---~~~l-Ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t~~ 160 (442)
T TIGR03372 93 NPNVIAAVENQLAKQPL---H-SQELL-DPL---RALL-AKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQSP 160 (442)
T ss_pred CHHHHHHHHHHHHhCCC---c-ccccC-CHH---HHHH-HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHhh
Confidence 68999998877643221 1 12221 111 1222 3556666643322 2455789999999988743 1
Q ss_pred CCCCEEEEeCCCCCCcccccccccCCccceeccce-eEEEeeeecCC---CCCCCHHHHHHHhhh-----CCCcEEEEc-
Q 012104 119 EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FESLPYKVNSS---TGYIDYDKLEEKALD-----FRPKLIICG- 188 (471)
Q Consensus 119 ~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~~~~~~v~~~---~~~iD~~~le~~~~~-----~~pklIi~~- 188 (471)
+...+|++..-.|.|.-. + .++.++.. ++....+..+. -...|.+++++.++. .+...|++.
T Consensus 161 ~gr~~ii~~~~~yHG~t~-~-------~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEp 232 (442)
T TIGR03372 161 RGKFTFIAASGAFHGKSL-G-------ALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEP 232 (442)
T ss_pred cCCcEEEEECCCccCCCH-H-------HhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 124678888866644311 1 11122110 00000000000 012367777776642 233455544
Q ss_pred -CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC--CeEEEEeeC
Q 012104 189 -GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRK 258 (471)
Q Consensus 189 -~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp--rgG~i~~~~ 258 (471)
.+.-|...+ +++++++|+++|+++|+|++|. |+--.|... .-+. ..|+++ +.|.|.|. ..|.+++++
T Consensus 233 v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~~ 309 (442)
T TIGR03372 233 IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT-GMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIATE 309 (442)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeccc-CCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEecH
Confidence 445566666 7899999999999999999995 642223210 0111 368887 57998652 345565665
Q ss_pred CCCCCCCCCCCCcccchHhhhhhc--CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINFA--VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GY 334 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~~--~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~ 334 (471)
++.+.+... .+.+++++ ++...++..++++.+.++ +..+++.+..++|.+.|++. .+
T Consensus 310 ---------------~i~~~~~~~~~~~~~T~~g-np~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~ 370 (442)
T TIGR03372 310 ---------------AVFSVLFDNPFLHTTTFGG-NPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEY 370 (442)
T ss_pred ---------------HHHHhhhccCccccCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344433211 12222333 233333333456655432 34455666667777777654 12
Q ss_pred e-EeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 335 S-LVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 335 ~-i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
. .+.. .....++-+.+.... ....+.+.|.++||.+.+.. | ..+.+||..+.. ++++|++++.+.+
T Consensus 371 ~~~i~~vRG~Gl~~giel~~~~-~~~~i~~~l~~~Gvl~~~~~-~------~~~~lr~~Ppl~----~t~~~id~~~~~l 438 (442)
T TIGR03372 371 PDLIIEARGKGLLMAIEFRDNE-IGYAFAKELFQQNILVAGTL-N------NAKSIRIEPPLT----ITIEQCALVIKAA 438 (442)
T ss_pred CCceEEEecceEEEEEEeCChH-HHHHHHHHHHHCCcEEeecC-C------CCCEEEEECCcc----cCHHHHHHHHHHH
Confidence 2 1111 112345556664321 24567788888999986431 1 136899987544 4589999999998
Q ss_pred HHHH
Q 012104 413 HRAV 416 (471)
Q Consensus 413 ~~~l 416 (471)
++++
T Consensus 439 ~~~~ 442 (442)
T TIGR03372 439 KDAL 442 (442)
T ss_pred HHhC
Confidence 8753
No 315
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.43 E-value=1e-10 Score=120.03 Aligned_cols=329 Identities=11% Similarity=0.011 Sum_probs=166.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+|+...+.... +.+..++. . ....+++ +++.+++.-.. +.-....+|||+|+.+++... ...
T Consensus 50 ~~p~v~~a~~~ql~~~~---~~~~~~~~-~---~~~~~la-~~l~~~~p~~~--~~~v~f~~sGseA~e~AlklAr~~tg 119 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEFT---HTCFMVTP-Y---EGYVALA-EKLNRIAPGSG--PKKSVFFNSGAEAVENAVKIARSYTG 119 (420)
T ss_pred CCHHHHHHHHHHHHhcc---CccccccC-C---hHHHHHH-HHHHHhCCCCC--CCEEEEeCCcHHHHHHHHHHHHHhcC
Confidence 47899999887775421 11110010 1 1112233 45556653211 112455789999999888643 233
Q ss_pred CCEEEEeCCCCCCcccccccccCCccc-eecc-----ceeEEEeeeecCC--------CCCCCHHHHHHHhh--h--CCC
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKI-SATS-----IYFESLPYKVNSS--------TGYIDYDKLEEKAL--D--FRP 182 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~-~~~g-----~~~~~~~~~v~~~--------~~~iD~~~le~~~~--~--~~p 182 (471)
..+|+...-.|.|.-. +.....+... ...+ .....++++.... ...-+++.+++.+. . .+.
T Consensus 120 r~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 198 (420)
T TIGR00700 120 RPGVVAFDHGFHGRTN-MTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNV 198 (420)
T ss_pred CCcEEEECCCcCCCcH-HHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcE
Confidence 4678888766544311 1110000000 0000 0011122210000 00012456776653 1 233
Q ss_pred cEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcC-CCCCeE
Q 012104 183 KLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSL-RGPRAG 252 (471)
Q Consensus 183 klIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l-~GprgG 252 (471)
..|++. ....|...+ +++|+++|+++|+++|+|+++. |+...|... ..+. ..|+++ ++|.+ +|.+.|
T Consensus 199 Aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-g~gr~g~~~a~~~~~~~pDi~~--lsK~l~~G~pig 275 (420)
T TIGR00700 199 AALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQT-GFARTGAMFACEHEGPEPDLIT--TAKSLADGLPLS 275 (420)
T ss_pred EEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccchhHHHhhcCCCCCEEE--eeccccCCcceE
Confidence 455554 333454444 7899999999999999999987 764444221 1122 357765 67996 467889
Q ss_pred EEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc-
Q 012104 253 MIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG- 331 (471)
Q Consensus 253 ~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~- 331 (471)
++++++ ++.+.+.........++....+.+++ ++++.+..+.+ .+++.+..+.+++.|++
T Consensus 276 ~v~~~~---------------~i~~~~~~~~~~~T~~~~pl~~aaa~-a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l 336 (420)
T TIGR00700 276 GVTGRA---------------EIMDAPAPGGLGGTYAGNPLACAAAL-AVLAIIESEGL---IERARQIGRLVTDRLTTL 336 (420)
T ss_pred EEEecH---------------HHHhhcCCCCcCCCCCcCHHHHHHHH-HHHHHHHhccH---HHHHHHHHHHHHHHHHHH
Confidence 999887 44444432222233333333333333 34554433333 33334444445555543
Q ss_pred ---CC-ceEeeCCCCCeeEEEEccCC--CC-C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 332 ---KG-YSLVTGGTENHLVLWDLRPL--GL-T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 332 ---~g-~~i~~~~~~~~~~~v~~~~~--~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
.+ +.-+. +. ..++++.+.+. .. + ...+.+.+.+.||.+.++..+ .+.+||+++.. .+
T Consensus 337 ~~~~~~~~~vr-g~-G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-------~~~lRl~p~l~----~~ 403 (420)
T TIGR00700 337 KAVDPRIGDVR-GL-GAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF-------GNIIRFLPPLT----IG 403 (420)
T ss_pred HhhCCCEEEee-cc-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC-------CCEEEEECCCC----cC
Confidence 22 22222 33 33556655321 11 1 234555667899999764322 26899987543 34
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVT 417 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~ 417 (471)
++++++..+.|.+++.
T Consensus 404 ~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 404 DELLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 7899999988887763
No 316
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.43 E-value=1e-10 Score=114.75 Aligned_cols=273 Identities=13% Similarity=0.114 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---cCC--C---CEEEEeCCCCCCcccccccccCCcc
Q 012104 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---LEP--H---DRIMGLDLPSGGHLTHGYYTSGGKK 146 (471)
Q Consensus 75 ~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---l~p--G---D~Vl~~~~~~~g~~s~~~~~~~g~~ 146 (471)
...+|..|...++.+|+.+.+.. -..+++||.+..++...- .+. | -.|+++...|-+.- +-
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~~~~~--g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~e---------K~ 186 (491)
T KOG1383|consen 118 VRKLEAECVNMIANLFNAPSDSC--GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFE---------KA 186 (491)
T ss_pred hHHHHHHHHHHHHHHhcCCcccc--CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHH---------HH
Confidence 34788889999999999987643 334566777855544332 111 2 12222221111100 00
Q ss_pred ceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCccccHHHHHHHHHH-hCCEEEEeccccchhh
Q 012104 147 ISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWDYARFRAVADK-CGALLLCDMAHISGLV 223 (471)
Q Consensus 147 ~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~~i~~ia~~-~g~~livD~a~~~glv 223 (471)
....+ ++...+++++.++.+|+..+.+.+.+ ++.++++. +.|+|..-|++++.++.-+ +++.+++|++-+ |++
T Consensus 187 a~yf~--v~l~~V~~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~G-gFi 262 (491)
T KOG1383|consen 187 ARYFE--VELREVPLDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLG-GFI 262 (491)
T ss_pred HhhEE--EEEEeeeccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCc-ccc
Confidence 01112 34445667778899999999999975 67777644 6789999999999999888 999999999877 777
Q ss_pred cc-ccC-CCCCC----CccEEEeCCCCcCCCCCe-EEEEeeCC-CCCCCCCCCCCcccchHhhhhh--c--CCCCCCCCC
Q 012104 224 AA-QEA-ANPFE----YCHIVTTTTHKSLRGPRA-GMIFYRKG-PKPPKKGQPEGAVYDFEDKINF--A--VFPSLQGGP 291 (471)
Q Consensus 224 ~~-g~~-~~p~~----~aDiv~~s~~K~l~Gprg-G~i~~~~~-~~~~~~~~~~i~~~~l~~~i~~--~--~~~~~~g~p 291 (471)
.. +.. +.+++ +.--++.++||.=..|.| +++++++. +++. ++.-.++. + ..|++-|+-
T Consensus 263 ~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~----------q~~~~~~w~Gg~y~s~TlngSR 332 (491)
T KOG1383|consen 263 NPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPH----------QLFFHTDWLGGIYASPTLNGSR 332 (491)
T ss_pred ccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccc----------eEEEeccccCccccCcccccCC
Confidence 63 322 22333 445788999998334555 88888764 2110 11101110 0 112233333
Q ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeE
Q 012104 292 HNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNIT 370 (471)
Q Consensus 292 ~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~ 370 (471)
.-+++++..+++-.+..++|.+..++++++++.|++.+++. ++.+++. .+-. ++.+....++-.++...|.+.|-.
T Consensus 333 ~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk-p~vs--~~~~~s~~~~i~elsd~l~~~GW~ 409 (491)
T KOG1383|consen 333 PGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK-PLVS--FILFGSNDVNIFELSDLLRKKGWI 409 (491)
T ss_pred cccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC-CcEE--EEEccCCccchhhhhHHHHhcCcC
Confidence 34566666667766677899999999999999999999987 7888643 2222 233344456777899999999999
Q ss_pred eccCC
Q 012104 371 VNKNA 375 (471)
Q Consensus 371 v~~~~ 375 (471)
++.-.
T Consensus 410 lnalq 414 (491)
T KOG1383|consen 410 LNALQ 414 (491)
T ss_pred ccccC
Confidence 87643
No 317
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=7e-10 Score=113.69 Aligned_cols=329 Identities=15% Similarity=0.090 Sum_probs=173.1
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++...+.+-. +.....+ ..+ ...++ .+++.+++.-.... -....+|||+|+.+++... ...
T Consensus 57 ~~p~v~~ai~~ql~~l~---~~~~~~~-~~~---~~~~l-a~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~tg 126 (425)
T PRK07495 57 RHPRVIAAVKAQLDRFT---HTCHQVV-PYE---NYVRL-AERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAATG 126 (425)
T ss_pred CCHHHHHHHHHHHhhcc---CcccCcc-CCH---HHHHH-HHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 36889998887765421 1100001 011 12223 35566666422111 2456789999999988743 233
Q ss_pred CCEEEEeCCCCCCcccccccccCCcccee-cc-----ceeEEEeeeecCCCCCCC----HHHHHHHhhh----CCCcEEE
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISA-TS-----IYFESLPYKVNSSTGYID----YDKLEEKALD----FRPKLII 186 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~g-----~~~~~~~~~v~~~~~~iD----~~~le~~~~~----~~pklIi 186 (471)
..+|+...-.|.|.- .+.....|..... .+ ..+..++++.+ .. .++ ++.+++.+.. .++..|+
T Consensus 127 r~~ii~~~~~yHG~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-g~~~~~~~~~l~~~~~~~~~~~~iaavi 203 (425)
T PRK07495 127 RSAVIAFGGGFHGRT-FMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LH-GVSVEQSLAALDKLFKADVDPQRVAAII 203 (425)
T ss_pred CCeEEEECCCcCCcc-HHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cc-cccHHHHHHHHHHHHHhccCCCceEEEE
Confidence 567888886664431 0110000000000 00 01122333221 11 122 4455766542 3456776
Q ss_pred Ec--CCCCCcc-cc---HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCC-CCCeEEEEe
Q 012104 187 CG--GSAYPRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGMIFY 256 (471)
Q Consensus 187 ~~--~s~~g~~-~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~-GprgG~i~~ 256 (471)
+. ....|.. .| +++++++|+++|+++|+|++|. |+-..|... .... ..|++ +++|.|. |.+.|++++
T Consensus 204 ~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi~--tlsK~l~~G~pigav~~ 280 (425)
T PRK07495 204 IEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADLT--TMAKGLAGGFPLAAVTG 280 (425)
T ss_pred ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCEE--eehhhhcCCccceEEEE
Confidence 55 2234432 22 5788999999999999999996 764444321 1111 24654 4569974 456788888
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GY 334 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~ 334 (471)
++ ++.+.+........++++.... ++..++++.+..+ .+.+++.+..++|++.|++. .+
T Consensus 281 ~~---------------~i~~~~~~~~~~~T~~~~pl~~-aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~ 341 (425)
T PRK07495 281 RA---------------EIMDAPGPGGLGGTYGGNPLGI-AAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETV 341 (425)
T ss_pred cH---------------HHHhccCCCCcCCCCCCCHHHH-HHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhC
Confidence 87 3444333222222333333333 3333456655433 34455555666666666543 12
Q ss_pred eEee--CCCCCeeEEEEccCCC---CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHH
Q 012104 335 SLVT--GGTENHLVLWDLRPLG---LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFE 406 (471)
Q Consensus 335 ~i~~--~~~~~~~~~v~~~~~~---~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~ 406 (471)
..+. .+. ..++++.+.+.. .+ ...+.+.+.+.|+.+.+. + + ..+.+||..|-. +++++++
T Consensus 342 ~~i~~vrG~-Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g---~-~~~~~r~~Ppl~----it~~~id 409 (425)
T PRK07495 342 PEIADIRGP-GFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G---V-HGNVIRFLAPIT----IQDDVFA 409 (425)
T ss_pred CCeeeeecC-ceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C---C-CCCEEEEeCCCc----cCHHHHH
Confidence 2211 122 456677774321 11 234667777899998542 1 1 136899976543 4589999
Q ss_pred HHHHHHHHHHHH
Q 012104 407 QIGEFLHRAVTL 418 (471)
Q Consensus 407 ~l~~~i~~~l~~ 418 (471)
++.+.|.+++..
T Consensus 410 ~~~~~l~~~l~~ 421 (425)
T PRK07495 410 EALDILEASILE 421 (425)
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 318
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.41 E-value=4.6e-10 Score=114.99 Aligned_cols=319 Identities=12% Similarity=0.091 Sum_probs=169.9
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++.+.+.+....+.+ ++ .. .+++ +++.++++...+ -.....||++|+.+++... ...
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~~~-------~~--~~-~~la-~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~tg 135 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYGLT-------SE--QE-ILFA-EELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGITG 135 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCCCC-------CH--HH-HHHH-HHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 3689999988777543211111 11 12 2233 556666653321 2355789999999888754 223
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceeccceeEE--Eee---eecCC---CCCCCHHHHHHHhhhC--CCcEEEEc--
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES--LPY---KVNSS---TGYIDYDKLEEKALDF--RPKLIICG-- 188 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~--~~~---~v~~~---~~~iD~~~le~~~~~~--~pklIi~~-- 188 (471)
..+|+...-.|.|+-. +... .++..+..... ..+ +..+. -..-|++.+++.+.++ ++..|++.
T Consensus 136 r~~ii~~~~~yHG~td-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 136 RSIIIKFLGCYHGHAD-TLLQ----GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred CCEEEEEcCccCCCCc-ccCc----ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 4678888766644310 0000 11111110000 000 00000 0124789999888643 34466655
Q ss_pred CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeCCCCcCCC-CCeEEEEeeCCC
Q 012104 189 GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKGP 260 (471)
Q Consensus 189 ~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~~ 260 (471)
.+..|...+ +++|+++|+++|+++|+|++|. |+. .|.. ..-+. ..|+++ +.|.|.| -.+|++++++
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R-~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~-- 284 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFR-VAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK-- 284 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-ccc-ccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH--
Confidence 444565555 3599999999999999999995 772 2221 11112 468876 5799864 3478888887
Q ss_pred CCCCCCCCCCcccchHhhhhh--cCCC-CCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----cCC
Q 012104 261 KPPKKGQPEGAVYDFEDKINF--AVFP-SLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT----GKG 333 (471)
Q Consensus 261 ~~~~~~~~~i~~~~l~~~i~~--~~~~-~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~----~~g 333 (471)
++.+.+.. ..+. ++.++ +....++..++++.+.++ ...+++.++.++|.+.|+ +.|
T Consensus 285 -------------~i~~~~~~~~~~~~~~T~~g-~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g 347 (433)
T PRK00615 285 -------------SIMDHLAPEGTIFQAGTLSG-NPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQG 347 (433)
T ss_pred -------------HHHhhhcCCCCcccCCCCcc-cHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444421 1111 12222 333344444466655432 345556666666655554 446
Q ss_pred ceEeeCCCCCeeEEEEccCCC---C------C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCC
Q 012104 334 YSLVTGGTENHLVLWDLRPLG---L------T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLL 401 (471)
Q Consensus 334 ~~i~~~~~~~~~~~v~~~~~~---~------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~ 401 (471)
+.+.... ...++.+.+.... + + ...+...|.++||.+.+...|. ..++ ...+
T Consensus 348 ~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-------~~ls--------~~ht 411 (433)
T PRK00615 348 FPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEA-------SFLS--------SAHS 411 (433)
T ss_pred CCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccc-------ccee--------cCCC
Confidence 6542222 2223444443211 1 1 1246777788999987542111 1222 1236
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012104 402 EKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~ 419 (471)
++|++++.+++++++++.
T Consensus 412 ~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 412 MENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999999988764
No 319
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=6.4e-10 Score=114.00 Aligned_cols=321 Identities=12% Similarity=0.056 Sum_probs=172.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++...+.+-. +.....+. ++ ..+ +++ +++.+++...... -.+.++|||+|+.+++... ...
T Consensus 57 ~~p~v~~ai~~ql~~~~---~~~~~~~~-~~--~~~-~la-~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK06777 57 RHPKVVAAVRQQLDQFT---HTAYQIVP-YA--SYV-TLA-ERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYTG 126 (421)
T ss_pred CCHHHHHHHHHHHhhcc---cccccccC-Ch--HHH-HHH-HHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhhC
Confidence 36889888887775421 11111111 11 112 233 5566666421101 2355789999999888643 233
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceeccc-------------eeEEEeeeecCC--CCCCCHHHHHHHhhh----CC
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI-------------YFESLPYKVNSS--TGYIDYDKLEEKALD----FR 181 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-------------~~~~~~~~v~~~--~~~iD~~~le~~~~~----~~ 181 (471)
..+|+...-.|.|.- .+. ++..+. .+..++++-... ...-|++.+++.+.. .+
T Consensus 127 r~~ii~~~~~yHG~t-~~~-------~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 127 RPGVIAFGGAFHGRT-LLT-------MALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred CCeEEEEcCCcCCcc-HHH-------HhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCc
Confidence 467888886664432 111 111111 011111210000 011246678887753 23
Q ss_pred CcEEEEc--CCCCCc-ccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcC-CCCCe
Q 012104 182 PKLIICG--GSAYPR-DWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSL-RGPRA 251 (471)
Q Consensus 182 pklIi~~--~s~~g~-~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l-~Gprg 251 (471)
...|++. .++.|. ..+ +++++++|+++|+++|+|++|. |+...|.... .++ ..|++ +++|.+ +|.+.
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pi 275 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPI 275 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCce
Confidence 4556654 333443 234 7899999999999999999997 7644443211 112 36776 477997 45678
Q ss_pred EEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 252 GMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 252 G~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
|++++++ ++.+.+......++.+++.. ..++...+|+.+.+ ++..+++.++.++|.+.|++
T Consensus 276 gav~~~~---------------~i~~~~~~~~~~~T~~~~p~-~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~ 336 (421)
T PRK06777 276 SAVVGRA---------------EVMDAPAPGGLGGTYAGNPL-AVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEK 336 (421)
T ss_pred EEEEEcH---------------HHHhccCCCCCCCCCCcCHH-HHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 9999887 44444433222233343333 33444446665433 34566677777778877765
Q ss_pred C----Cc-eEeeCCCCCeeEEEEccC--CCCCH----HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 332 K----GY-SLVTGGTENHLVLWDLRP--LGLTG----NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 332 ~----g~-~i~~~~~~~~~~~v~~~~--~~~~~----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
. ++ .-+ .+.+..+ .+.+.. .+.+. ..+.+.|.+.||.+.++..+ .+.+||..|-. .
T Consensus 337 l~~~~~~i~~v-rg~G~~~-~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~-------g~~lr~~ppl~----i 403 (421)
T PRK06777 337 AKASCPAIVDI-RARGSMV-AVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVH-------GNVIRFLYPLT----I 403 (421)
T ss_pred HHHhCCCeEEe-cCceEEE-EEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCC-------CCEEEEeCCCC----C
Confidence 3 21 112 2333333 333322 12111 23444567799999664211 25899986533 4
Q ss_pred CHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAV 416 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l 416 (471)
++++++++.+.|.+++
T Consensus 404 ~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 404 PDAQFSKALNILTRLL 419 (421)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 5899999999888776
No 320
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.40 E-value=4.3e-10 Score=115.51 Aligned_cols=332 Identities=16% Similarity=0.088 Sum_probs=170.0
Q ss_pred CcHHHHHHHhhhhhcc-CCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCC--CCCCceeeecCChHHHHHHHHHHh--
Q 012104 43 TSFAVIEALGSALTNK-YSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLD--PTQWGVNVQPYSGSPANFAAYTAV-- 117 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~-~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~--~~~~~~~v~~~sGt~A~~~~~~al-- 117 (471)
-.|.|.+++.+.+... +..+ ..+. + ...++++ +++.+++..+ .... +.+..+||++|+.+++...
T Consensus 56 ~~p~v~~ai~~ql~~~~~~~~----~~~~-~---~~~~~la-e~l~~~~~~~~~~~~~-~~f~~~sGseA~e~AlklAr~ 125 (425)
T PRK09264 56 NNPVLKQALIDYLQRDGITHG----LDMH-T---TAKREFL-ETFEETILKPRGLDYK-VQFTGPTGTNAVEAALKLARK 125 (425)
T ss_pred CCHHHHHHHHHHHHhcccccc----cccC-c---HHHHHHH-HHHHHhhcCCcCCCce-EEEeCCCHHHHHHHHHHHHHH
Confidence 3789999998877531 2111 1111 1 1122233 4455544222 1100 2232469999999988754
Q ss_pred cCCCCEEEEeCCCCCCcccccccccCCccceec--c---ceeEEEeeeecCCCCCCCHHHHHHHhhhC-----CCcEEEE
Q 012104 118 LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT--S---IYFESLPYKVNSSTGYIDYDKLEEKALDF-----RPKLIIC 187 (471)
Q Consensus 118 l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~--g---~~~~~~~~~v~~~~~~iD~~~le~~~~~~-----~pklIi~ 187 (471)
.....+|+...-.|.|.- .+.....|...... + ..+..++++.......-|++++++.+.+. ++..|++
T Consensus 126 ~tgr~~ii~~~~~yHG~t-~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~ 204 (425)
T PRK09264 126 VTGRTNIVAFTNGFHGMT-LGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIV 204 (425)
T ss_pred hcCCCeEEEECCccCCcc-HHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEE
Confidence 233467888876554431 11100000000000 0 01122222100000113678888888642 2345555
Q ss_pred c--CCCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCC--CCCeEEEEe
Q 012104 188 G--GSAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLR--GPRAGMIFY 256 (471)
Q Consensus 188 ~--~s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~--GprgG~i~~ 256 (471)
. .+..|... .+++|+++|++||+++|+|++|. |+--.|.. . .-+. ..|++++ +|.|. |.+.|++++
T Consensus 205 Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PDi~t~--~K~l~~~G~pigav~~ 281 (425)
T PRK09264 205 ETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPDIVTL--SKSISGYGLPMALVLI 281 (425)
T ss_pred ecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCCEEEe--ccccCCCccceEEEEE
Confidence 4 33344333 47899999999999999999996 54222221 0 1112 3577765 59974 445688888
Q ss_pred eCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--Cc
Q 012104 257 RKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GY 334 (471)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~ 334 (471)
+++ +. .+......+..++ +....++...++.+.... .++.+++.++.++|.+.|++. .+
T Consensus 282 ~~~---------------i~-~~~~~~~~~T~~g-np~~~aaa~a~l~~~~~~--~~l~~~~~~~g~~l~~~l~~l~~~~ 342 (425)
T PRK09264 282 KPE---------------LD-VWKPGEHNGTFRG-NNLAFVTATAALEEYWSD--DAFEKEVKAKGELVRERLEEIAAKY 342 (425)
T ss_pred chh---------------hh-ccCCCccCCCCCC-CHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 863 21 1211111122222 222233332345332221 245566666667777766543 22
Q ss_pred e--EeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 335 S--LVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 335 ~--i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
. +........++++.+.+. .....+.+.|.+.||.+.+.. .....||++.+... ++++++++.+.|
T Consensus 343 ~~~~~~vrg~Gl~~~i~l~~~-~~~~~l~~~~~~~Gv~~~~~~-------~~~~~lr~~p~l~~----t~~ei~~~~~~l 410 (425)
T PRK09264 343 PGLGAEVRGRGMMQGIDFGDG-ELAGKIAAEAFENGLIIETSG-------PEDEVVKLLPPLTI----DEEELEEGLDIL 410 (425)
T ss_pred CCceecceecccEEEEEecCh-HHHHHHHHHHHHCCCEEeccC-------CCCCEEEEeCCCCC----CHHHHHHHHHHH
Confidence 2 111111234557776432 124467788888999986521 11367999865443 489999999999
Q ss_pred HHHHHHH
Q 012104 413 HRAVTLT 419 (471)
Q Consensus 413 ~~~l~~~ 419 (471)
.+++...
T Consensus 411 ~~~l~~~ 417 (425)
T PRK09264 411 EEAVAEV 417 (425)
T ss_pred HHHHHHH
Confidence 9988653
No 321
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.40 E-value=4.9e-10 Score=114.52 Aligned_cols=329 Identities=14% Similarity=0.097 Sum_probs=168.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCC-CCceeeecCChHHHHHHHHHHh--cC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPT-QWGVNVQPYSGSPANFAAYTAV--LE 119 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~-~~~~~v~~~sGt~A~~~~~~al--l~ 119 (471)
-.|.|.+++...+.+. ++.....+ .++ ...+++ +++.++...+.. ...+.+..+||++|+.+++... ..
T Consensus 52 ~~p~v~~ai~~ql~~~---~~~~~~~~-~~~---~~~~la-e~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~t 123 (412)
T TIGR02407 52 NNPKLKQALIDYLADD---GIIHSLDM-ATE---AKREFL-ETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVT 123 (412)
T ss_pred CCHHHHHHHHHHHhhc---cceecccc-CcH---HHHHHH-HHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhc
Confidence 4799999988777532 11111111 011 122222 445554321110 0002232479999999988754 23
Q ss_pred CCCEEEEeCCCCCCcccccccccCCccceec--c---ceeEEEeeeecCCC-CCCCHHHHHHHhhhC-----CCcEEEEc
Q 012104 120 PHDRIMGLDLPSGGHLTHGYYTSGGKKISAT--S---IYFESLPYKVNSST-GYIDYDKLEEKALDF-----RPKLIICG 188 (471)
Q Consensus 120 pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~--g---~~~~~~~~~v~~~~-~~iD~~~le~~~~~~-----~pklIi~~ 188 (471)
...+|+...-.|.|.- .+.....+...... + ..+..++++ +... ..-|++.+++.+.++ ++..|++.
T Consensus 124 gr~~ii~~~~~yHG~t-~~als~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~E 201 (412)
T TIGR02407 124 GRSNVVSFTNAFHGMT-LGSLSVTGNRFKRQGAGVPLSNVSRMPYD-GYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILE 201 (412)
T ss_pred CCCeEEEECCCcCCch-HHHHHhcCCcccccCCCCCCCCeEECCCC-CccccchhHHHHHHHHHHhccCCCCceEEEEec
Confidence 3478988886664431 11100000000000 0 001111211 0000 012467788877542 34566654
Q ss_pred --CCCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCC--CCCeEEEEee
Q 012104 189 --GSAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLR--GPRAGMIFYR 257 (471)
Q Consensus 189 --~s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~--GprgG~i~~~ 257 (471)
.++.|... -+++|+++|+++|+++|+|+++. |+--.|.. . .... ..|++++ .|+|. |.+.|+++++
T Consensus 202 pi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~--~K~lg~~G~pigav~~~ 278 (412)
T TIGR02407 202 TVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCL--SKSISGYGLPLALTLIK 278 (412)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEe--chhccCCccceeEEEEc
Confidence 34445422 25788999999999999999986 54222211 1 1112 4688765 49975 4467888887
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHHHHc----C
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQ-ASTPAFKAYAKQVKANAVALGNYLTG----K 332 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~-~~~~~~~~~~~~~~~na~~l~~~L~~----~ 332 (471)
++ + ..+......+.+++ +....++..++++. +.++ ++.+++.+..++|.+.|+. .
T Consensus 279 ~~---------------~-~~~~~~~~~~T~~g-npl~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~ 338 (412)
T TIGR02407 279 PE---------------L-DVWKPGEHNGTFRG-NNLAFVTATAALEYYWSDD---AFEKAVQRKSEIIQERLDRIVAEY 338 (412)
T ss_pred hh---------------h-hccCCCccCCCCCc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhhC
Confidence 63 2 11211111122222 33333333334553 3332 3445555555666665553 2
Q ss_pred C-ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHH
Q 012104 333 G-YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEF 411 (471)
Q Consensus 333 g-~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~ 411 (471)
+ +.. .......++++.+.+. .....+.+.|.++||.+.+.. ...+.|||..+.. ++++|++++.+.
T Consensus 339 ~~~~~-~vrg~Gl~~~l~l~~~-~~~~~~~~~~~~~Gv~v~~~~-------~~~~~lr~~p~l~----~t~~~i~~~~~~ 405 (412)
T TIGR02407 339 PELIK-QVRGRGLMQGIECGDG-DLAGKIAKAAFENGLIIETSG-------PNDEVIKLLPPLT----IDEETLQQGLDI 405 (412)
T ss_pred CCceE-eeecceeEEEEEecCh-HHHHHHHHHHHHCCCEEeccC-------CCCCEEEEECCCC----CCHHHHHHHHHH
Confidence 2 211 1112345668877532 234567788888999986521 1236799987654 458999999999
Q ss_pred HHHHHH
Q 012104 412 LHRAVT 417 (471)
Q Consensus 412 i~~~l~ 417 (471)
+++++.
T Consensus 406 l~~~l~ 411 (412)
T TIGR02407 406 LEQAVE 411 (412)
T ss_pred HHHHHh
Confidence 998874
No 322
>PRK06541 hypothetical protein; Provisional
Probab=99.39 E-value=4.4e-10 Score=116.21 Aligned_cols=322 Identities=16% Similarity=0.094 Sum_probs=170.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.|.+|+...+..- ... ....+. .+ ...++ .+++.+++..+.+ -...++||++|+.+++....
T Consensus 70 ~p~v~~Av~~q~~~~-~~~-~~~~~~--~~---~~~~l-a~~l~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~~ 138 (460)
T PRK06541 70 RAELAEAAAKQAGTL-AFF-PLWSYA--HP---PAIEL-AERLAALAPGDLN---RVFFTTGGSEAVESAWKLAKQYFKL 138 (460)
T ss_pred CHHHHHHHHHHHhhC-cCc-cccccC--CH---HHHHH-HHHHHHhCCCCcC---EEEEcCCcHHHHHHHHHHHHHHHHh
Confidence 688998887776432 100 011111 11 12222 3556666543222 23557899999998886431
Q ss_pred -C--CCCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeec-C-CCCCCC--------HHHH
Q 012104 119 -E--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVN-S-STGYID--------YDKL 173 (471)
Q Consensus 119 -~--pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~-~-~~~~iD--------~~~l 173 (471)
. ...+|+...-.|.|.-. +. ++.++. .+..++++.- . ..+.-| .+.+
T Consensus 139 ~g~~~r~~ii~~~~~yHG~t~-~a-------~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 210 (460)
T PRK06541 139 TGKPGKHKVISRAIAYHGTTQ-GA-------LAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRI 210 (460)
T ss_pred cCCCCccEEEEEcCcccCcch-hh-------hcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHH
Confidence 1 24788888766544321 11 111111 0111111100 0 000112 3677
Q ss_pred HHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeC
Q 012104 174 EEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s 241 (471)
++.+... ++..|++. .++.|...+ +++++++|+++|+++|+|++|. |+--.|.. ..-+. ..|+++
T Consensus 211 ~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-GfGR~G~~~a~~~~gv~PDivt-- 287 (460)
T PRK06541 211 EEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVIC-AFGRLGEMFGCERFGYVPDIIT-- 287 (460)
T ss_pred HHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchhhhhhhcCCCCCEEE--
Confidence 7777532 23455554 456677666 8899999999999999999994 43111211 00011 368876
Q ss_pred CCCcCCC-C-CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc--CC--CCCCCCCcHHHHHHHHHHHHHhccHHHHHHH
Q 012104 242 THKSLRG-P-RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA--VF--PSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (471)
Q Consensus 242 ~~K~l~G-p-rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~--~~--~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~ 315 (471)
+.|.|.| . +.|.+++++ ++.+.+... .+ .+..++ +....++...+++.+..+ ...
T Consensus 288 ~gK~l~~G~~pigav~~~~---------------~i~~~~~~~~~~~~~~~T~~g-np~~~aaala~l~~l~~~---~~~ 348 (460)
T PRK06541 288 CAKGITSGYSPLGAMIASD---------------RLFEPFLDGPTMFLHGYTFGG-HPVSAAVALANLDIFERE---GLL 348 (460)
T ss_pred ecccccCCccceeEEEEcH---------------HHHHHhhcCCCccccCCCCCC-CHHHHHHHHHHHHHHHhc---cHH
Confidence 6799865 2 456666665 333333221 11 112222 223333333345544332 455
Q ss_pred HHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCC-----CCCH--------HHHHHHHhhcCeEeccCCcCCC
Q 012104 316 KQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPL-----GLTG--------NKVEKLCDLCNITVNKNAVFGD 379 (471)
Q Consensus 316 ~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~-----~~~~--------~~~~~~L~~~gI~v~~~~~p~~ 379 (471)
+++.++.++|.+.|++. .+.++. .+ ...++-+.+... ..+. ..+.+.|.++||.+.+. +
T Consensus 349 ~~~~~~g~~l~~~L~~l~~~~~v~~vrg-~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~-- 423 (460)
T PRK06541 349 DHVRDNEPAFRATLEKLLDLPIVGDVRG-DGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD--D-- 423 (460)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEe-cceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec--C--
Confidence 77778888888888765 232211 12 233444454211 0110 23556777899999752 1
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
...+.+||..+.. ++++|++++.+.+.+++..
T Consensus 424 ---~g~~~lrl~Ppl~----~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 424 ---RGDPVVQLAPPLI----SGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred ---CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 1236799987543 4589999999999998864
No 323
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.38 E-value=1.5e-10 Score=109.89 Aligned_cols=310 Identities=17% Similarity=0.198 Sum_probs=192.2
Q ss_pred HHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCC--CCCcccccccccCCccceeccceeEEEee--
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLP--SGGHLTHGYYTSGGKKISATSIYFESLPY-- 159 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~--~~g~~s~~~~~~~g~~~~~~g~~~~~~~~-- 159 (471)
+.+++.||.++ .+-++-|-.|-...+..++++|+.+...... .+.|+... .| .+...|.-..-++.
T Consensus 86 ~avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT----r~-h~~~ng~~~~n~~~~e 155 (471)
T COG3033 86 DAVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTT----RG-HIQINGATPRNVYVDE 155 (471)
T ss_pred HHHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecch----hH-HHHhcCCccccccccc
Confidence 45678999875 3556788888888888888877766542111 13333211 10 11122221111111
Q ss_pred ----eec-CCCCCCCHHHHHHHhhhCCCc---EEE---EcCCCCCcccc---HHHHHHHHHHhCCEEEEeccccch---h
Q 012104 160 ----KVN-SSTGYIDYDKLEEKALDFRPK---LII---CGGSAYPRDWD---YARFRAVADKCGALLLCDMAHISG---L 222 (471)
Q Consensus 160 ----~v~-~~~~~iD~~~le~~~~~~~pk---lIi---~~~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~g---l 222 (471)
.++ |-.|.+|++.|++++.+..+. .|+ ++++.-|...+ +++.++||+++|+.++.|++..+. +
T Consensus 156 a~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYF 235 (471)
T COG3033 156 AFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYF 235 (471)
T ss_pred cccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhh
Confidence 111 124789999999999875443 343 34555666554 567789999999999999986643 2
Q ss_pred hcc---ccCCCC--------CCCccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhh-----hcCCCC
Q 012104 223 VAA---QEAANP--------FEYCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN-----FAVFPS 286 (471)
Q Consensus 223 v~~---g~~~~p--------~~~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~-----~~~~~~ 286 (471)
+-. |..... +.|||-++.|.-|--..+-||++..+++- . +++..... .-.||.
T Consensus 236 Ik~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~---------~--fDvy~~~~~~~V~~eG~~t 304 (471)
T COG3033 236 IKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDS---------F--FDVYEECRTLVVVQEGFPT 304 (471)
T ss_pred hhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCcc---------H--HHHHHHHHhheEeeccccc
Confidence 211 111111 23799999999998445678999888750 0 12222221 122443
Q ss_pred CCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccC-------CCCCHHH
Q 012104 287 LQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRP-------LGLTGNK 359 (471)
Q Consensus 287 ~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~-------~~~~~~~ 359 (471)
.||..-..+.++|+.|.+.... .|.+..++..++|.+.|.+.|++++ .+.+.|-+++|... +...++.
T Consensus 305 -YGgl~GrdmealAvGL~e~~~~---~yl~~Rv~Qv~YL~~~l~~~GVpi~-~paGGHavfvda~~~lphip~eqFpaqa 379 (471)
T COG3033 305 -YGGLAGRDMEALAVGLREGVNF---DYLAHRVAQVQYLADGLEEAGVPIV-QPAGGHAVFVDAGKFLPHIPAEQFPAQA 379 (471)
T ss_pred -cCcccchhHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHhcCCeeE-ecCCCceEEeehhhhcCCCChhhCcHHH
Confidence 3555666788899999887653 5667778888999999999999975 45678888888532 1223444
Q ss_pred H-HHHHhhcCeEecc-CCc--CCCC-C----CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 360 V-EKLCDLCNITVNK-NAV--FGDS-S----ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 360 ~-~~~L~~~gI~v~~-~~~--p~~~-~----~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
+ .++-.+.||...- +.+ ..|+ . +..-.-+|+..|- +-.+.+.|+.+++.+.++.++...+
T Consensus 380 la~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR---rtYt~~HmD~V~~a~~~l~e~~~~i 448 (471)
T COG3033 380 LACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR---RTYTQTHMDFVIEAFKALKENAEDI 448 (471)
T ss_pred HHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccc---cccchhHHHHHHHHHHHHHhccccC
Confidence 4 4555788987543 222 2222 1 1112579998654 3457899999999999988876544
No 324
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.38 E-value=8.4e-10 Score=111.14 Aligned_cols=329 Identities=16% Similarity=0.070 Sum_probs=177.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
+|.|.+|+...+..-. ....++......++.. +++.+++..+.. ......+||+.||.+++... ...+
T Consensus 74 hP~Vv~Av~~q~~~~~---h~~~~~~~~e~~v~~a-----e~L~~~~p~~~~--~~~~f~~sGaeA~E~AiKiAr~~Tgr 143 (447)
T COG0160 74 HPRVVEAVKRQLAKLN---HTHTRDLYYEPYVELA-----EKLTALAPGSGL--KKVFFGNSGAEAVEAAIKIARAYTGR 143 (447)
T ss_pred CHHHHHHHHHHHHHhh---cccCCcccchhHHHHH-----HHHHHhCCcccC--CeEEecCCcHHHHHHHHHHHHHHhCC
Confidence 6999999877653321 1122322222222222 455566554211 13566789999999998754 2345
Q ss_pred CEEEEeCCCCCCcccccccccCCcccee-c--c---ceeEEEeeeecCCC-C--------CCCHHHHHHHhhh-----CC
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISA-T--S---IYFESLPYKVNSST-G--------YIDYDKLEEKALD-----FR 181 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~--g---~~~~~~~~~v~~~~-~--------~iD~~~le~~~~~-----~~ 181 (471)
..|+.+.-.|.|. |++...-.|+.... . + ..+..++|+..... + .-..+.++..+.. .+
T Consensus 144 ~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~ 222 (447)
T COG0160 144 PGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEE 222 (447)
T ss_pred CcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCc
Confidence 7788887665443 12221111111111 0 0 11233344321110 1 1123345554432 23
Q ss_pred CcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----CccEEEeCCCCcCCC-CC
Q 012104 182 PKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTTTTHKSLRG-PR 250 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aDiv~~s~~K~l~G-pr 250 (471)
|..|++. ++.-|...+ +++++++|++||+++|+|++|. |+--.|.+ ..++ ..||+|+| |.+.| ..
T Consensus 223 vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQt-G~GRTG~~-fa~E~~gv~PDivt~a--K~ig~G~P 298 (447)
T COG0160 223 VAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQT-GFGRTGKM-FAFEHFGVEPDIVTLA--KSLGGGLP 298 (447)
T ss_pred eeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccccc-hhhhhcCCCCCEEEec--ccccCCCc
Confidence 4555554 444454443 5788999999999999999997 76544532 1222 36899876 99865 34
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
.|.++++++ +.+ .....+.++.+|-.....+|+ +.|+.+.+ +...++..+.-++|.+.|.
T Consensus 299 l~avv~r~e---------------i~~-~~~g~~~~Tf~GNpva~Aaa~-AvL~vie~---e~L~~~a~~~G~~l~~~L~ 358 (447)
T COG0160 299 LSAVVGRAE---------------IMD-WPPGGHGGTFGGNPVACAAAL-AVLDVIEE---ENLLERAAELGEYLRDRLE 358 (447)
T ss_pred eeEEeccHH---------------hcc-cCCcccCCCCCcCHHHHHHHH-HHHHHHHH---ccHHHHHHHHHHHHHHHHH
Confidence 577777763 322 222222233444333333333 34554432 2566666777777788776
Q ss_pred cC--CceEeeCCCC-CeeEEEEccCC----CCCH---HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 331 GK--GYSLVTGGTE-NHLVLWDLRPL----GLTG---NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 331 ~~--g~~i~~~~~~-~~~~~v~~~~~----~~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
++ -+..+..-.+ ..++-+++... ..+. ..+...+.++|+.+.... ...+.|||-.|-. +
T Consensus 359 ~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G-------~~~nviRi~PPL~----i 427 (447)
T COG0160 359 ELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCG-------PHGNVLRILPPLT----I 427 (447)
T ss_pred HHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccC-------CCCcEEEEeCCcc----c
Confidence 54 3444432111 22344454321 1232 345677788998775421 1247899976533 5
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~~ 418 (471)
+++++++..++|.+++..
T Consensus 428 s~e~~d~~l~il~~al~~ 445 (447)
T COG0160 428 SDEELDEGLDILEEALKE 445 (447)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 689999999999998864
No 325
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.37 E-value=9.5e-10 Score=113.52 Aligned_cols=329 Identities=11% Similarity=0.037 Sum_probs=167.7
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+.+. . +... ....++ ...++ .+++.+++...... -...++||++|+.+++... ....
T Consensus 74 ~p~v~~ai~~q~~~~-~--~~~~-~~~~~~---~~~~l-a~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tgr 143 (443)
T PRK06058 74 APRVVEAVREQVARF-T--HTCF-MVTPYE---GYVAV-AEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYTGR 143 (443)
T ss_pred CHHHHHHHHHHHHhc-c--Cccc-cccCCH---HHHHH-HHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhhCC
Confidence 689999888777542 1 1000 000111 22223 35566666422111 2356789999999988732 2234
Q ss_pred CEEEEeCCCCCCcccccccccCCcccee-cc-----ceeEEEee--eec-CCCCCCC--------HHHHHHHhhhCCCcE
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISA-TS-----IYFESLPY--KVN-SSTGYID--------YDKLEEKALDFRPKL 184 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~g-----~~~~~~~~--~v~-~~~~~iD--------~~~le~~~~~~~pkl 184 (471)
++|+.....|.|.-. +.....+..... .+ .....+++ +.+ +.....+ .+.+++.+...++..
T Consensus 144 ~~ii~~~~~yHG~t~-~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa 222 (443)
T PRK06058 144 QAVVVFDHAYHGRTN-LTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA 222 (443)
T ss_pred CeEEEECCCcCcChH-HHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence 789998877655421 110000000000 00 00111111 111 0000111 222333332234566
Q ss_pred EEEcC--CCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCC-CCCeEEE
Q 012104 185 IICGG--SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR-GPRAGMI 254 (471)
Q Consensus 185 Ii~~~--s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~-GprgG~i 254 (471)
|++.+ ...|...+ +++++++|+++|+++|+|+++. |+...|... .-+. ..|+++.+ |.+. |.+.|++
T Consensus 223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~G~Pi~av 299 (443)
T PRK06058 223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAGGLPLSAV 299 (443)
T ss_pred EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccCCCccEEE
Confidence 66552 22343332 7899999999999999999987 763333221 1111 35888775 9975 4456788
Q ss_pred EeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--
Q 012104 255 FYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-- 332 (471)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-- 332 (471)
++++ ++.+.+......+++++ +....++...+++.+.++ +..+++.+..++|.+.|++.
T Consensus 300 ~~~~---------------~i~~~~~~~~~~~T~~g-npl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~ 360 (443)
T PRK06058 300 TGRA---------------EIMDAPHPGGLGGTYGG-NPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAA 360 (443)
T ss_pred EEcH---------------HHHhhccCCCCCCCCCC-CHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHh
Confidence 8876 34443432222223333 333334444456554332 34556666667777777653
Q ss_pred CceEee--CCCCCeeEEEEccCC--CC-C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHH
Q 012104 333 GYSLVT--GGTENHLVLWDLRPL--GL-T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKD 404 (471)
Q Consensus 333 g~~i~~--~~~~~~~~~v~~~~~--~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d 404 (471)
.+.++. .+.+. ++.+.+... .. + ...+.+.|.+.||.+.+... ..+.||+..+.. +++++
T Consensus 361 ~~~~i~~vrg~G~-~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~-------~~~~lr~~Ppl~----~t~~~ 428 (443)
T PRK06058 361 EDDRIGDVRGRGA-MIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT-------YGNVIRLLPPLV----IGDEL 428 (443)
T ss_pred hCCcEEeeeccce-EEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC-------CCCEEEEECCCc----cCHHH
Confidence 123211 22332 334444221 11 1 23355666789999965311 125899976544 45899
Q ss_pred HHHHHHHHHHHHH
Q 012104 405 FEQIGEFLHRAVT 417 (471)
Q Consensus 405 ~~~l~~~i~~~l~ 417 (471)
++++.+.+.++++
T Consensus 429 i~~~~~~l~~~l~ 441 (443)
T PRK06058 429 LREGLDVLEAALA 441 (443)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 326
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.37 E-value=1.6e-09 Score=111.57 Aligned_cols=320 Identities=17% Similarity=0.117 Sum_probs=170.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+- ..+.. +....+ ...++ .+++.+++....+ -...++||++|+..++....
T Consensus 63 ~~p~v~~ai~~ql~~l-~~~~~---~~~~~~---~~~~l-a~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~~ 131 (442)
T PRK13360 63 GRPEIVEAVRAQAGEL-DYAPA---FQMGHP---KAFEL-ANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYHR 131 (442)
T ss_pred CCHHHHHHHHHHHHhC-CCccc---CCcCCH---HHHHH-HHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 4689999988776432 11110 101111 12223 3566677632111 23557899999998886432
Q ss_pred ---CC-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCCC--CC--------CCHHH
Q 012104 119 ---EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSST--GY--------IDYDK 172 (471)
Q Consensus 119 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~~--~~--------iD~~~ 172 (471)
++ ..+|++..-.|.|.- .+. ++.++. .+..++++.+... +. -+.++
T Consensus 132 ~~g~~~r~~ii~~~~~yHG~t-~ga-------ls~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 132 ARGEGSRTRLIGRERGYHGVG-FGG-------ISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred hcCCCCCcEEEEEcCCcCCcc-Hhh-------hhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 12 368998886664431 111 111110 0111222111000 00 02467
Q ss_pred HHHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEe
Q 012104 173 LEEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (471)
Q Consensus 173 le~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~ 240 (471)
+++++... ++..|++. .+..|...+ +++|+++|+++|+++|+|++|. |+--.|..- .-+. ..|+++
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDivt- 281 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAPFAAQYFGVTPDLLT- 281 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCceee-
Confidence 78877533 23455554 445566667 8999999999999999999995 541112210 0111 368775
Q ss_pred CCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-------CCCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 241 TTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-------VFPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 241 s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-------~~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
+.|.|.|. ..|.+++++ ++.+.+... ...+++++ +....++...+++.+.++
T Consensus 282 -~gK~l~gG~~P~gav~~~~---------------~i~~~~~~~~~~~~~~~~~~T~~g-~pl~~aaa~a~L~~l~~~-- 342 (442)
T PRK13360 282 -CAKGLTNGAIPMGAVFVSS---------------EIHDAFMQGPEAGIEFFHGYTYSG-HPLACAAALATLDLYERE-- 342 (442)
T ss_pred -eeeccccCccceEEEEEcH---------------HHHHHhhcCCccccccccCCCCCC-CHHHHHHHHHHHHHHHhC--
Confidence 56998642 244465665 333322211 11223333 333344444466665432
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-ceEee--CCCCCeeEEEEccCC--CC--CHHHHHHHHhhcCeEeccCCcCCCCCCCC
Q 012104 312 KAYAKQVKANAVALGNYLTGKG-YSLVT--GGTENHLVLWDLRPL--GL--TGNKVEKLCDLCNITVNKNAVFGDSSALA 384 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~g-~~i~~--~~~~~~~~~v~~~~~--~~--~~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 384 (471)
...+++.++.++|.+.|++.+ +..+. .+.+. +.-+.+.+. +. ...++...|.++||.+...
T Consensus 343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl-~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~---------- 410 (442)
T PRK13360 343 -GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGL-VGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT---------- 410 (442)
T ss_pred -CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccce-EEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec----------
Confidence 355677777778888887542 32211 11111 222333221 11 2345666777899998642
Q ss_pred CCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 385 PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 385 ~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.+||..+... +++|++++.+.+.++++.
T Consensus 411 ~~~lr~~Ppl~~----t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 411 GDILALSPPLII----EEAQIDELFDILAQALKE 440 (442)
T ss_pred CCEEEEeCCCcc----CHHHHHHHHHHHHHHHHH
Confidence 257999865443 589999999999988753
No 327
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.36 E-value=4e-11 Score=117.25 Aligned_cols=229 Identities=16% Similarity=0.159 Sum_probs=139.2
Q ss_pred CCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh
Q 012104 39 SENFTSFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV 117 (471)
Q Consensus 39 s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al 117 (471)
+-+..++++++++...+.. |.+- .|+-+ ......+-. ..+.++.++|++. + +.++..+.|.+++..++
T Consensus 35 G~s~~~~e~iea~~~~~~~-~v~L----e~~l~~g~~~~R~~~-~~~~~~~~~~aea----~-~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRA-PVEL----ETDLKTGKRGARLTE-LAELLCGLTGAEA----A-AIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhcc-ccee----eeecccchhhHHHHH-HHHHHhcccchhh----e-eeECCcHHHHHHHHhhh
Confidence 5567799999998766543 2210 11111 122233322 2244556666664 2 33456677888888888
Q ss_pred cCCCCEEEEeCCCC-CCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCCCCCc-
Q 012104 118 LEPHDRIMGLDLPS-GGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSAYPR- 194 (471)
Q Consensus 118 l~pGD~Vl~~~~~~-~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s~~g~- 194 (471)
..++..|+..-+.- |||+.-. ..+...|. +.+.++ .+..-...+++..+.+ ++++++ +..+.||.
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v~------d~~~~aG~--~l~EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~ 171 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRVP------DIIRLAGA--KLVEVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFT 171 (395)
T ss_pred ccCCeEEEEccccccCCCCChh------HHHHHcCC--EEEEec---ccCcCCHHHHHHHhcc-CCeeEEEEeecccccc
Confidence 88666666543322 4554311 12334454 334443 2345677888888874 677775 33343443
Q ss_pred -cccHHHHHHHHHHhCCEEEEeccccchhhccccCCC---CCC-CccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCC
Q 012104 195 -DWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN---PFE-YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPE 269 (471)
Q Consensus 195 -~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~---p~~-~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~ 269 (471)
..+.+++.+||+++|+++++|.+.. .... ..|. -+. ++|+|++|++|.|.||++|+|++++
T Consensus 172 ~~l~~~~l~~ia~~~~lpvivD~aSg--~~v~-~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK----------- 237 (395)
T COG1921 172 GMLSEEELVEIAHEKGLPVIVDLASG--ALVD-KEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK----------- 237 (395)
T ss_pred ccccHHHHHHHHHHcCCCEEEecCCc--cccc-cccchhHHHhcCCCEEEEecchhcCCCccceEechH-----------
Confidence 3567889999999999999999753 2111 1111 122 7999999999999999999999998
Q ss_pred CcccchHhhhhhcCC-CCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 270 GAVYDFEDKINFAVF-PSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 270 i~~~~l~~~i~~~~~-~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
++.+++++... .++-- .-..++++..||+....++
T Consensus 238 ----elI~~lq~~~l~Ralrv--~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 238 ----ELIEKLQSHPLKRALRV--DKETLAALEAALELYLQPE 273 (395)
T ss_pred ----HHHHHHHhhhhhhhhhc--CcHhHHHHHHHHHHHcCch
Confidence 56666654211 11111 2346788888888877654
No 328
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.36 E-value=1.7e-09 Score=107.04 Aligned_cols=314 Identities=19% Similarity=0.139 Sum_probs=177.5
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCC-CCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHL-DPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~-~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
+|.|.+|+...+.+..+-|.|. ++|-...+.+.+++.. +. + -.++|||+|+..++... ..-
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e~----v-rfvnSGTEAtmsAiRlARa~Tg 134 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIEK----V-RFVNSGTEATMSAIRLARAYTG 134 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcccE----E-EEecchhHHHHHHHHHHHHhhC
Confidence 6889999999888777666554 3343345778888876 43 2 33689999999888654 345
Q ss_pred CCEEEEeCCCCCCcccccccccCCcc------ceeccce----eEEEeeeecCCCCCCCHHHHHHHhhhCC--CcEEEEc
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKK------ISATSIY----FESLPYKVNSSTGYIDYDKLEEKALDFR--PKLIICG 188 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~------~~~~g~~----~~~~~~~v~~~~~~iD~~~le~~~~~~~--pklIi~~ 188 (471)
.|+|+.++-+|.||....... .|.. ....|.. -.++.+ ...|++.+++++++.. ...|++.
T Consensus 135 R~kIikF~G~YHG~~D~~lv~-agsg~~t~g~p~s~Gvp~~~a~~ti~~------~yND~~al~~~~~~~g~~IAaVIvE 207 (432)
T COG0001 135 RDKIIKFEGCYHGHSDSLLVK-AGSGAATLGSPSSPGVPADVAKHTLVL------PYNDLEALEEAFEEYGDDIAAVIVE 207 (432)
T ss_pred CCeEEEEcCCCCCCccHHHhh-cCcCcccCCCCCCCCCChhhhccEEEe------cCCCHHHHHHHHHHcCCcEEEEEec
Confidence 689999998887775321110 0000 0001110 011111 2469999999998753 3455554
Q ss_pred --CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhcc-ccCCCCCC-CccEEEeCCCCcCCC-CCeEEEEeeCC
Q 012104 189 --GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAA-QEAANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKG 259 (471)
Q Consensus 189 --~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~-g~~~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~ 259 (471)
..+.|.+.| ++.|+++|+++|++||.|+... |+... |....-+. ..|+.| +.|.+.| ...|.+-+++
T Consensus 208 Pv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT-GFR~~~gGaq~~~gi~PDltt--lGKiIGGGlP~ga~gGr~- 283 (432)
T COG0001 208 PVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT-GFRVALGGAQGYYGVEPDLTT--LGKIIGGGLPIGAFGGRA- 283 (432)
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh-hcccCCcccccccCcCcchhh--hhhhhcCCcceeeeccHH-
Confidence 334555444 4688999999999999999976 66432 21111122 356655 5599754 4567777777
Q ss_pred CCCCCCCCCCCcccchHhhhhhcCCCCCCC-C--CcHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHH----Hc
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFAVFPSLQG-G--PHNHQIGALAVALKQAST-PAFKAYAKQVKANAVALGNYL----TG 331 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g-~--p~~~~iaa~a~al~~~~~-~~~~~~~~~~~~na~~l~~~L----~~ 331 (471)
++.+.+.... +-+|+ + -+...++|-.++++++.+ ++ ..+++.+..++|++.| .+
T Consensus 284 --------------eiM~~~~p~g-~vyqaGT~sgnplamaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~ 345 (432)
T COG0001 284 --------------EIMEQLAPLG-PVYQAGTLSGNPLAMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAER 345 (432)
T ss_pred --------------HHHhhhCCCC-CccccCCCCCcHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHH
Confidence 4555443221 11121 1 133344555567777654 22 2334444555555555 45
Q ss_pred CCceEeeCCCCCeeEEEEccCCCC---------CH---HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 332 KGYSLVTGGTENHLVLWDLRPLGL---------TG---NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 332 ~g~~i~~~~~~~~~~~v~~~~~~~---------~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
.|+++.....++. +.+-|...++ +. ..+.+.|.+.||.+.+.. -...=+|+ .
T Consensus 346 ~g~~~~v~~~gsm-~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~---------~ea~flS~------a 409 (432)
T COG0001 346 HGIPLTVNRVGSM-FGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQ---------FEAGFLST------A 409 (432)
T ss_pred hCCCeEEeeecce-EEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcc---------ccceeeec------c
Confidence 5776643333332 2333322111 11 123446678899885421 01122222 3
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l~~ 418 (471)
.+++|+++..+.+.++++.
T Consensus 410 hte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 410 HTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 4589999999999887764
No 329
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=6.6e-10 Score=114.57 Aligned_cols=322 Identities=15% Similarity=0.086 Sum_probs=170.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+.... +....++ .++.. .++ .+++.+++...... -...++||++|+.+++... ....
T Consensus 60 ~p~v~~Ai~~ql~~~~---~~~~~~~-~~~~~---~~l-ae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tgr 129 (445)
T PRK08593 60 PPRVVEAIKAQADKFI---HYTPAYM-YHEPL---VRL-AKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTGR 129 (445)
T ss_pred CHHHHHHHHHHHHhcc---Ccccccc-CCHHH---HHH-HHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhCC
Confidence 6899999887764321 1111111 11211 222 35666776432101 2355689999999988743 2224
Q ss_pred CEEEEeCCCCCCcccccccccCCccceecc-------------ceeEEEeeeecCC--CCCCC-------HHHHHHHhhh
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATS-------------IYFESLPYKVNSS--TGYID-------YDKLEEKALD 179 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g-------------~~~~~~~~~v~~~--~~~iD-------~~~le~~~~~ 179 (471)
.+|+...-.|.|.. .+. ++.++ ..+..++++-... ....+ ++++++++..
T Consensus 130 ~~ii~~~~~YHG~t-~~a-------ls~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (445)
T PRK08593 130 PYIISFTNAYHGST-YGS-------LSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEK 201 (445)
T ss_pred CeEEEECCCcCCCc-HHH-------HhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHh
Confidence 57888776654431 111 11111 0111122210000 00111 2445544432
Q ss_pred ----CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcC
Q 012104 180 ----FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSL 246 (471)
Q Consensus 180 ----~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l 246 (471)
.+...|++. .+..|...+ +++++++|+++|+++|+|++|. |+--.|... .-+. ..|+++ +.|.+
T Consensus 202 ~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t--~gK~l 278 (445)
T PRK08593 202 YLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMS--FGKSL 278 (445)
T ss_pred hcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEee--ecccc
Confidence 234566655 334455545 7899999999999999999985 542222211 0111 357775 56998
Q ss_pred CC-CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Q 012104 247 RG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVAL 325 (471)
Q Consensus 247 ~G-prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l 325 (471)
.| .++|++++++ ++.+.+.....-.+.++ +....++..++++.+.++ +..+++.++.++|
T Consensus 279 ~~G~p~gav~~~~---------------~i~~~~~~~~~~~T~~~-~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l 339 (445)
T PRK08593 279 AGGMPMSAIVGRK---------------EIMESLEAPAHLFTTGA-NPVSCAAALATIDMIEDE---SLLQRSAEKGEYA 339 (445)
T ss_pred cCCcccEEEEEcH---------------HHHhhhccCCCCCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHH
Confidence 64 4678888887 45544432211122233 333344444456655432 4566677777777
Q ss_pred HHHHHcC--CceEee--CCCCCeeEEEEccCC---CC-C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 326 GNYLTGK--GYSLVT--GGTENHLVLWDLRPL---GL-T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 326 ~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~---~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
.+.|++. .+.++. .+.+ .++-+.+... .. + ...+...|.+.||.+.+. ..+.+|+..+.
T Consensus 340 ~~~L~~l~~~~~~v~~vrG~G-l~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------~~~~lr~~p~l 409 (445)
T PRK08593 340 RKRFDQWVSKYNFVGDVRGYG-LSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------AGNVLRFQPPL 409 (445)
T ss_pred HHHHHHHHhcCCcEEEEeccc-eEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------CCCEEEEECCC
Confidence 7777653 222221 1121 1223333211 11 1 234667777899998542 12579998755
Q ss_pred CCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
. ++++|++++.+.+.+++...
T Consensus 410 ~----~t~~~id~~~~~l~~~l~~~ 430 (445)
T PRK08593 410 V----ITYEQLDTALNTIEQAFTAL 430 (445)
T ss_pred c----cCHHHHHHHHHHHHHHHHHH
Confidence 4 45899999999999988753
No 330
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.36 E-value=1.3e-09 Score=112.41 Aligned_cols=320 Identities=17% Similarity=0.111 Sum_probs=171.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|+|.+++.+.+.+- ..+. ... + ..+ ...+++ +++.+++....+ -...++||++|+.+++....
T Consensus 66 ~~p~v~~ai~~ql~~l-~~~~-~~~-~-~~~---~~~~la-~~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 134 (445)
T PRK09221 66 GRPEIVEAVARQAATL-DYAP-AFQ-M-GHP---LAFELA-ERLAELAPGGLD---HVFFTNSGSESVDTALKIALAYHR 134 (445)
T ss_pred CCHHHHHHHHHHHHhc-cCcc-ccc-c-CCH---HHHHHH-HHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 4789999988776542 1111 100 1 111 222233 556677642211 23557899999998886432
Q ss_pred --C-C-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCCC--CC--------CCHHH
Q 012104 119 --E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSST--GY--------IDYDK 172 (471)
Q Consensus 119 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~~--~~--------iD~~~ 172 (471)
. + ..+|+...-.|.|.- .+. ++..+. .+..++++.+... +. -..++
T Consensus 135 ~~g~~~r~~ii~~~~~yHG~t-~ga-------ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (445)
T PRK09221 135 ARGQGTRTRLIGRERGYHGVG-FGG-------ISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADD 206 (445)
T ss_pred hcCCCCCcEEEEECCCcCccc-hhh-------hccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHH
Confidence 1 2 357888886654431 111 111110 0111222110000 00 01357
Q ss_pred HHHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEe
Q 012104 173 LEEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (471)
Q Consensus 173 le~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~ 240 (471)
+++++... ++..|++. .+..|...+ +++++++|+++|+++|+|++|. |+--.|..- .-+. ..|++++
T Consensus 207 l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~~ 285 (445)
T PRK09221 207 LERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIITF 285 (445)
T ss_pred HHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEEe
Confidence 77777543 23455554 455676677 8999999999999999999996 542112110 0111 3587765
Q ss_pred CCCCcCCC--CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------C-CCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 241 TTHKSLRG--PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------V-FPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 241 s~~K~l~G--prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~-~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
.|.|.| ...|.+++++ ++.+.+... . ...+.+++... .++...+++.+.++
T Consensus 286 --gK~l~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~~~~T~~~~pl~-~aaa~a~L~~i~~~-- 345 (445)
T PRK09221 286 --AKGLTNGAIPMGAVIASD---------------EIYDAFMQGPEYAIEFFHGYTYSAHPVA-CAAGLATLDIYREE-- 345 (445)
T ss_pred --ccccccCcccceeeEEcH---------------HHHHhhccCcccccccccccCCCcCHHH-HHHHHHHHHHHHhc--
Confidence 598864 2356677766 333332210 1 11233333333 33333456655432
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CceEeeC--CCCCeeEEEEccCC----CCCHHHHHHHHhhcCeEeccCCcCCCCCCCC
Q 012104 312 KAYAKQVKANAVALGNYLTGK-GYSLVTG--GTENHLVLWDLRPL----GLTGNKVEKLCDLCNITVNKNAVFGDSSALA 384 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~-g~~i~~~--~~~~~~~~v~~~~~----~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 384 (471)
...+++.++.++|++.|++. ++..+.. +.+ .+.-+.+.+. ......+.+.|.+.||.+...
T Consensus 346 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~G-l~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------- 413 (445)
T PRK09221 346 -DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIG-LVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT---------- 413 (445)
T ss_pred -cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCc-eEEEEEEecccccccchHHHHHHHHHHCCeEEeec----------
Confidence 45677777888888888765 3332221 111 1223344321 112345677788899998642
Q ss_pred CCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 385 PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 385 ~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.+||..+.. ++++|++++.+.+++++..
T Consensus 414 ~~~lr~~Ppl~----~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 414 GDTIALSPPLI----IEKAQIDELVDALGDALRA 443 (445)
T ss_pred CCEEEEECCcc----CCHHHHHHHHHHHHHHHHh
Confidence 25799986543 3589999999999998853
No 331
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.36 E-value=6.2e-10 Score=114.22 Aligned_cols=319 Identities=14% Similarity=0.054 Sum_probs=174.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcC---
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLE--- 119 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~--- 119 (471)
-.|.+.+++...+.. +.....+ .++ ... .++ + .+++.++++...+ ....+.||++|+..++.....
T Consensus 62 ~~p~v~~ai~~~~~~-~~~~~~~-~~~-~~~---~~~-l-a~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~~ 130 (427)
T TIGR00508 62 NHPRLNAAAQKQIDK-MSHVMFG-GFT-HKP---AIE-L-CQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYWQ 130 (427)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc-ccC-CHH---HHH-H-HHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478999988776643 2211111 111 111 222 2 2455666643322 245578999999988875321
Q ss_pred ----C-CCEEEEeCCCCCCcccccccccCCccceeccce-------------eEEEeeeecCCC---CCCCHHHHHHHhh
Q 012104 120 ----P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-------------FESLPYKVNSST---GYIDYDKLEEKAL 178 (471)
Q Consensus 120 ----p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-------------~~~~~~~v~~~~---~~iD~~~le~~~~ 178 (471)
+ ..+|+..+-.|.|+.. +. +...+.. ...++++..... ..-|++++++++.
T Consensus 131 ~~~~~~r~~il~~~~~yHG~t~-~~-------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 131 AKGEKNRQKFLTIRSGYHGDTF-GA-------MSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred hhCCCCccEEEEEcCCcCCccH-hh-------hcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 2 3689988876655421 11 1111110 001111111000 0125677888776
Q ss_pred hC--CCcEEEEcC--CCC-C----ccccHHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeCCCCcC
Q 012104 179 DF--RPKLIICGG--SAY-P----RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSL 246 (471)
Q Consensus 179 ~~--~pklIi~~~--s~~-g----~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s~~K~l 246 (471)
.. +...|++.+ ... | ..-.+++++++|+++|+++|+|++| .|+-..|.. ..-+. ..|+++ +.|.|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 43 234555442 222 2 2245789999999999999999999 476333322 11122 468886 57998
Q ss_pred CCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-----CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 012104 247 RGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-----FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (471)
Q Consensus 247 ~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-----~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~ 319 (471)
.|. ..+.++.++ ++.+.+.... +...+++ +....++...+++.+..+ +..+++.
T Consensus 280 ~gG~~p~~a~~~~~---------------~~~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~l~~~---~~~~~~~ 340 (427)
T TIGR00508 280 TGGYMTLSATVTTD---------------KVAQTISSGEAGCFMHGPTFMG-NPLACAVAEASLAILLEG---EWQKQVS 340 (427)
T ss_pred hcCcccceEEEEcH---------------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 542 345555555 4444443211 1112222 333334444456654332 4567788
Q ss_pred HHHHHHHHHHHcCCce-EeeCC-CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCC
Q 012104 320 ANAVALGNYLTGKGYS-LVTGG-TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTS 397 (471)
Q Consensus 320 ~na~~l~~~L~~~g~~-i~~~~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~ 397 (471)
++.++|.+.|++.+.. .+... ..+.++.+.+... .+...+.+.|.+.||.+.+. .+.+|+..+...
T Consensus 341 ~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-~~~~~~~~~l~~~Gv~~~~~----------~~~l~~~ppl~~- 408 (427)
T TIGR00508 341 AIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-VNVEELQKKFVEQGVWIRPF----------GKLIYVMPPYII- 408 (427)
T ss_pred HHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-cCHHHHHHHHHHCCeEEEec----------CCEEEEECCCCC-
Confidence 8888899988876421 11110 1133445555432 24567888888999998542 146999875443
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 012104 398 RGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 398 ~g~~~~d~~~l~~~i~~~l~ 417 (471)
+++|++++.+.+++++.
T Consensus 409 ---t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 409 ---TTEQLQKLTAALIEALH 425 (427)
T ss_pred ---CHHHHHHHHHHHHHHHh
Confidence 48999999999999875
No 332
>PRK12403 putative aminotransferase; Provisional
Probab=99.36 E-value=1.1e-09 Score=113.27 Aligned_cols=321 Identities=14% Similarity=0.112 Sum_probs=164.5
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCc-chhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc---
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGG-NEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g-~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all--- 118 (471)
-.|.|.+|+...+.. +..+ .+++++ .+...++ .++++++++...+ ..+.++||++||.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~---~~~~~~~~~~~~~l----ae~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~~ 139 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYY---NMFFHTTHPAVIEL----SELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRYW 139 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCe---ecccccCCHHHHHH----HHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 369999998877744 2211 112221 2222222 2567777763322 24667899999999887652
Q ss_pred ----CCCCE-EEEeCCCCCCcccccccccCCccceeccce-----------eEEEeeeec-CCCCCC--------CHHHH
Q 012104 119 ----EPHDR-IMGLDLPSGGHLTHGYYTSGGKKISATSIY-----------FESLPYKVN-SSTGYI--------DYDKL 173 (471)
Q Consensus 119 ----~pGD~-Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----------~~~~~~~v~-~~~~~i--------D~~~l 173 (471)
+++.. |+...-.| ||+... .++.++.. +..++++.. ...+.+ +.+++
T Consensus 140 ~~~g~~~r~~ii~~~~~y-----HG~t~~---~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (460)
T PRK12403 140 QVLGKPQKKIMIGRWNGY-----HGSTLA---ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQL 211 (460)
T ss_pred HhhCCCCCcEEEEECCCc-----CcccHh---hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 24444 44444344 332110 11222211 111111100 000001 13566
Q ss_pred HHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeC
Q 012104 174 EEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s 241 (471)
++.+.+. +...|++. .+..|...+ +++++++|+++|+++|+|++|. |+--.|..- .-+. ..|+++
T Consensus 212 e~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~e~~gv~PDiv~-- 288 (460)
T PRK12403 212 EEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG-GFGRTGEWFAHEHFGFEPDTLS-- 288 (460)
T ss_pred HHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhhhhhcCCCCCeEE--
Confidence 6655322 23455554 444566666 8999999999999999999995 552222211 1112 358887
Q ss_pred CCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh--cC--CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHH
Q 012104 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF--AV--FPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (471)
Q Consensus 242 ~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~--~~--~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~ 315 (471)
+.|.|.|. ..|.+++++ ++.+.+.. .. +.+++++ +....++..++|+.+.++ ...
T Consensus 289 ~gK~lggG~~Piga~v~~~---------------~i~~~~~~~~~~~~~~~T~~g-nPl~~Aaala~L~~i~~~---~l~ 349 (460)
T PRK12403 289 IAKGLTSGYVPMGGLVLSK---------------RIAEALVEQGGVFAHGLTYSG-HPVAAAVAIANLKALRDE---GVV 349 (460)
T ss_pred EcccccccccceEEEEECH---------------HHHHHHhcCCCccccCCCCCC-CHHHHHHHHHHHHHHHhc---cHH
Confidence 57998643 234444555 34443321 11 1223333 333344444456655432 245
Q ss_pred HHHH-HHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCCCC
Q 012104 316 KQVK-ANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFGDS 380 (471)
Q Consensus 316 ~~~~-~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~ 380 (471)
+++. ++.++|.+.|++. .+.++. .+. ..+..+.+.... .. ...+...+.+.|+.+.+.
T Consensus 350 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------ 422 (460)
T PRK12403 350 TRVKDDTGPYLQRCLREVFGDHPLVGEVQGA-GLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST------ 422 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeEeec-ceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec------
Confidence 5664 6667777776542 222221 112 223344543211 11 122345567789998631
Q ss_pred CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 381 SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 381 ~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+.+|+..+-. ++++|++++.+.+++++...
T Consensus 423 ----~~~~~l~Ppl~----it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 423 ----LGRMIMAPALV----AGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred ----CCEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 13588875433 45899999999999988653
No 333
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.36 E-value=1.5e-09 Score=112.26 Aligned_cols=324 Identities=13% Similarity=0.082 Sum_probs=164.6
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+.+....+. ..+. .+ ...++ .+++.+++.....+ -...++|||+|+.+++... ....
T Consensus 72 ~p~v~~ai~~q~~~~~~~~~--~~~~--~~---~~~~l-a~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tgr 141 (451)
T PRK06918 72 HPKVKEALHKQVDQYIHTGF--NVMM--YE---PYIEL-AEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYTKR 141 (451)
T ss_pred CHHHHHHHHHHHHhccCccc--cccc--cH---HHHHH-HHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHhCC
Confidence 68899988877754321111 0111 11 11222 35566776532211 2456789999999988743 2334
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccc-------------eeEEEeeeecC-CCCCCC--------HHHHHHHhh-
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-------------YFESLPYKVNS-STGYID--------YDKLEEKAL- 178 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-------------~~~~~~~~v~~-~~~~iD--------~~~le~~~~- 178 (471)
.+|+...-.|.|.-. +. ++..+. .+..++++... ....+. .+.+++.+.
T Consensus 142 ~~ii~~~~~yHG~t~-~~-------ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 142 QGIISFSRGFHGRTL-MT-------MTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred CcEEEECCCcCccch-hh-------hhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 678888766644321 11 111110 01111221000 000111 223444332
Q ss_pred ---hCCCcEEEEc--CCCCCccc---c-HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----CccEEEeCCCCc
Q 012104 179 ---DFRPKLIICG--GSAYPRDW---D-YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTTTTHKS 245 (471)
Q Consensus 179 ---~~~pklIi~~--~s~~g~~~---d-~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aDiv~~s~~K~ 245 (471)
..+...|++. ....|... + +++|+++|+++|+++|+|+.+. |+...|... ++. ..|++ |++|.
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~t-g~gr~g~~~-a~~~~~v~pDi~--t~sK~ 289 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT-GFARTGKYF-AIEHFDVVPDLI--TVSKS 289 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CcCccCcee-hhHhcCCCCCEE--eeehh
Confidence 1234455544 22223322 2 6789999999999999999986 765444321 222 25755 57899
Q ss_pred C-CCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Q 012104 246 L-RGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVA 324 (471)
Q Consensus 246 l-~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~ 324 (471)
+ +|.|.|++++++ ++.+.+......+..++......++. .+++.+.++++.+ ++....+.
T Consensus 290 l~~G~pig~v~~~~---------------~i~~~~~~~~~~~T~~g~~l~~aaa~-a~l~~i~~~~~~~---~~~~~g~~ 350 (451)
T PRK06918 290 LGAGVPISGVIGRK---------------EIMDESAPGELGGTYAGSPLGCAAAL-AVLDIIEKENLND---RAIELGKV 350 (451)
T ss_pred hcCCCccEEEEEcH---------------HHHhccCCCCcCcCCCcCHHHHHHHH-HHHHHHHHCCHHH---HHHHHHHH
Confidence 6 567889999887 44444433222233333333333333 3455443333333 33333445
Q ss_pred HHHHHHcC--CceEe--eCCCCCeeEEEEccCC--CC----CHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCC
Q 012104 325 LGNYLTGK--GYSLV--TGGTENHLVLWDLRPL--GL----TGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPA 394 (471)
Q Consensus 325 l~~~L~~~--g~~i~--~~~~~~~~~~v~~~~~--~~----~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~ 394 (471)
|.+.|++. .+..+ ..+.+..+.|.-..+. .. ....+.+.|.++||.+.++..+ .+.+||+++.
T Consensus 351 l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-------~~~lrl~p~l 423 (451)
T PRK06918 351 VMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY-------GNVIRVLMPL 423 (451)
T ss_pred HHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC-------CCEEEEECCC
Confidence 55555432 22221 1223333333221110 11 1334566678899999764211 2689998754
Q ss_pred CCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 395 MTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 395 ~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
. .+++++++..+.|.+++...
T Consensus 424 ~----~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 424 V----ITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred c----cCHHHHHHHHHHHHHHHHHH
Confidence 3 34789999999999888653
No 334
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.36 E-value=1.7e-10 Score=125.56 Aligned_cols=286 Identities=12% Similarity=0.048 Sum_probs=175.7
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-c--CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEe
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-L--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~ 158 (471)
.+..+++|.|++... +.++. .+|.+-.+++++. . +++++|++.+..|+...... +......+++++.
T Consensus 114 ~Qt~i~eLtGm~~aN--aSl~d-~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~-------~t~a~~~g~~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVAN--ASLLD-EGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVL-------HTRAKPFGIEVIV 183 (939)
T ss_pred HHHHHHHHHCCChhh--hhccc-hhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHH-------HHHHHhcCcEEEE
Confidence 457799999998631 23332 3444455555553 2 34589999997776543110 0011233344443
Q ss_pred eeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc
Q 012104 159 YKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH 236 (471)
Q Consensus 159 ~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD 236 (471)
. |+++|++.+ +...++ .++|.+|.+.|+++|.++++++|++++++.-.. +.+....|-+ ++|
T Consensus 184 ~---------~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~----al~ll~~Pge~GaD 247 (939)
T TIGR00461 184 V---------DCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLM----ALTLLTPPGHYGAD 247 (939)
T ss_pred E---------cHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechH----HhCCcCCHHHcCCc
Confidence 2 455665544 234444 357889999999999999999999999966443 2233445555 899
Q ss_pred EEEeCCCCc-----CCCCCeEEEEeeCCCCCCCC----------CCCCCcccch--H---hhhhhcCCCCCCCCCcHHHH
Q 012104 237 IVTTTTHKS-----LRGPRAGMIFYRKGPKPPKK----------GQPEGAVYDF--E---DKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 237 iv~~s~~K~-----l~GprgG~i~~~~~~~~~~~----------~~~~i~~~~l--~---~~i~~~~~~~~~g~p~~~~i 296 (471)
|++++.+++ +.||..|++.++++++..-+ .|+.- |.+ . +-|++-. .+..-...+..
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~--~~l~LqtReqhIrRek--AtSNICt~qaL 323 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTA--LRLALQTREQHIRRDK--ATSNICTAQVL 323 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCcc--ceeecccccccccccc--cCcchhHHHHH
Confidence 999888887 45899999999887532211 11110 111 0 1111110 00000112222
Q ss_pred HHHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccC
Q 012104 297 GALAVA--LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 297 aa~a~a--l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~ 374 (471)
.|+.++ +..+...++++..+++..++.+|++.|.+.|++++.. .--.-+.+++. +.+.+++.+.|.++||.++..
T Consensus 324 ~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~-~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~~~ 400 (939)
T TIGR00461 324 LANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHELINK-TWFDTLTVKVG--NGISSELLKAAEEFNINLRAV 400 (939)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-CccceEEEEeC--CCCHHHHHHHHHHCCCeeeec
Confidence 332222 3444556789999999999999999999999998643 11112344542 235778888999999997652
Q ss_pred CcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 375 AVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 375 ~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
..+.+++++...++ ++|++.+.+++.
T Consensus 401 ---------~~~~i~~s~~E~~t----~~di~~l~~~~~ 426 (939)
T TIGR00461 401 ---------DTTTVGIALDETTT----KADVENLLKVFD 426 (939)
T ss_pred ---------CCCEEEEEeecCCC----HHHHHHHHHHhc
Confidence 12579999876655 799999999985
No 335
>PRK06105 aminotransferase; Provisional
Probab=99.33 E-value=2.2e-09 Score=111.07 Aligned_cols=322 Identities=14% Similarity=0.069 Sum_probs=171.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-+|.|.+|+.+.+.+. .......++. .+ ...++ .+++.+++..+.+ -...+.||++|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~~-~~~~~~~~~~--~~---~~~~l-ae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~~ 134 (460)
T PRK06105 65 SEQRLVEAAARQMKKL-PFYHTFSHKS--HG---PVIDL-AEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYNN 134 (460)
T ss_pred CCHHHHHHHHHHHHhC-CCeecccccC--CH---HHHHH-HHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 3799999998877542 1001111111 11 11222 3566677653322 23557899999999887642
Q ss_pred --C-C-CCEEEEeCCCCCCcccccccccCCccceeccce------------eEEEeeeecCC---CC-------CCCHHH
Q 012104 119 --E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY------------FESLPYKVNSS---TG-------YIDYDK 172 (471)
Q Consensus 119 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~------------~~~~~~~v~~~---~~-------~iD~~~ 172 (471)
. + ..+|+...-.|.|.- .+. ++..+.. +..++++-... .+ ...+++
T Consensus 135 ~~g~t~r~~il~~~~~yHG~t-~~a-------~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06105 135 ALGRPEKKKIISRQRGYHGVT-IAS-------ASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANE 206 (460)
T ss_pred hcCCCCCcEEEEecCccCCcc-hhh-------eeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHH
Confidence 1 2 357888876654432 111 1111110 11111110000 00 012466
Q ss_pred HHHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEe
Q 012104 173 LEEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (471)
Q Consensus 173 le~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~ 240 (471)
+++++... ++..|++. ....|...+ +++++++|+++|+++|+|++|. |+--.|..- .-+. ..|+++.
T Consensus 207 le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~t-G~GRtG~~f~~~~~~v~PDi~~~ 285 (460)
T PRK06105 207 LEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVIC-GFGRTGNMFGCETFGIKPDILVM 285 (460)
T ss_pred HHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEecccc-CCCcCchhhhHHhcCCCCCeeee
Confidence 77777432 34566654 344455555 7899999999999999999995 441122110 0011 3688865
Q ss_pred CCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-----C--CCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 241 TTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----V--FPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 241 s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-----~--~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
.|.|.|. ..|.+++++ ++.+.+... . ..+++++..... ++..++++.+.++
T Consensus 286 --gK~lggG~~P~~av~~~~---------------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~-aaa~a~L~~i~~~-- 345 (460)
T PRK06105 286 --SKQLSSSYQPLSAVLMNE---------------KVYDPIADESGKIGTFGHGFTASGHPVAA-AVALENLAIIEER-- 345 (460)
T ss_pred --ecccccCcccceEEEEcH---------------HHHHHHhcccccCcccccCCCCCCCHHHH-HHHHHHHHHHHhc--
Confidence 5998763 467777776 344433321 0 112223322222 3333356665432
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCC
Q 012104 312 KAYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
+..+++.+..++|.+.|++. .+.++. .+.+ .+.-+++.... .+ ...+...+.+.||.+.+.
T Consensus 346 -~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~---- 419 (460)
T PRK06105 346 -DLVGNAAERGARLQARLRALADHPLVGEVRGVG-LIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM---- 419 (460)
T ss_pred -cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec----
Confidence 45677777778888877664 222221 1122 23334442211 01 234667778899998541
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+.+|+..+.. ++++|++++.+.+.+++...
T Consensus 420 ------g~~i~l~Ppl~----it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 420 ------GDTLAFCPPLI----ITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred ------CCEEEEECCCc----cCHHHHHHHHHHHHHHHHHH
Confidence 24799986543 35899999999999998753
No 336
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=2.2e-09 Score=110.50 Aligned_cols=327 Identities=16% Similarity=0.095 Sum_probs=169.2
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+.+....+.+ .+. ++ ..+++ .+++.+++...... -...++|||+|+.+++... ....
T Consensus 72 ~p~v~~Ai~~ql~~~~~~~~~--~~~--~~---~~~~l-Ae~L~~~~p~~~~~--~v~f~~SGsEA~e~AlklAr~~tgr 141 (441)
T PRK05769 72 HPKVVKAVKEQAEKFLHYSLT--DFY--YE---PAVEL-AERLVEIAPGGFEK--KVFFTNSGTESNEAAIKIARYHTGR 141 (441)
T ss_pred CHHHHHHHHHHHHhccCccCc--ccC--CH---HHHHH-HHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHHhCC
Confidence 588888888776542110100 111 11 12223 35666666421111 2355789999999988643 2234
Q ss_pred CEEEEeCCCCCCcccccccccCCc-cce---e--ccceeEEEeeee------cCCCC----CCCHHHHHHHh-hh----C
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGK-KIS---A--TSIYFESLPYKV------NSSTG----YIDYDKLEEKA-LD----F 180 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~-~~~---~--~g~~~~~~~~~v------~~~~~----~iD~~~le~~~-~~----~ 180 (471)
++|+...-.|.|+-. +.....+. ... + ...++..++++- +..+. .-+.+.+++.+ +. .
T Consensus 142 ~~Ii~~~~~yHG~t~-~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~ 220 (441)
T PRK05769 142 KYIIAFLGAFHGRTY-GSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPE 220 (441)
T ss_pred CeEEEECCCcCCccH-HHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCC
Confidence 688888765544321 10000000 000 0 000111122210 00000 00134466523 21 2
Q ss_pred CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCCCCcCCC-CC
Q 012104 181 RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTTHKSLRG-PR 250 (471)
Q Consensus 181 ~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~~K~l~G-pr 250 (471)
++..|++. .+..|...+ +++++++|+++|+++|+|++|. |+-..|.... .+. ..|+++ ++|.+.| .+
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt--~~K~l~~G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIIT--LAKAIAGGLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEE--EcccccCCcc
Confidence 34555654 445566677 8999999999999999999997 6533332211 112 358886 4599754 45
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
.|+++++++ +....... ..+++++... ..++...+++.+. + +..+++.++.++|++.|+
T Consensus 298 ~gav~~~~~---------------i~~~~~~~-~~~T~~g~p~-~~aaa~a~L~~l~--~--~~~~~~~~~g~~l~~~L~ 356 (441)
T PRK05769 298 LGAVIGRAE---------------LMFLPPGS-HANTFGGNPV-AAAAALATLEELE--E--GLLENAQKLGEYLRKELK 356 (441)
T ss_pred cEEEEEehh---------------hhhcCCCC-CCCCCCcCHH-HHHHHHHHHHHHH--H--HHHHHHHHHHHHHHHHHH
Confidence 688888774 22222211 1122233222 3333334565543 2 456677777788888886
Q ss_pred cCC--ceEeeCCC-CCeeEEEEccCCC--CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 331 GKG--YSLVTGGT-ENHLVLWDLRPLG--LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 331 ~~g--~~i~~~~~-~~~~~~v~~~~~~--~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
+.. +.++..-. -..++-+.+.... .+ ...+.+.|.+.||.+.+. ....+|+..+.. +++
T Consensus 357 ~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~---------~~~~lr~~p~l~----~t~ 423 (441)
T PRK05769 357 ELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGA---------GKSAIRIIPPLI----ITE 423 (441)
T ss_pred HHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecC---------CCCEEEEeCCCC----CCH
Confidence 542 33321111 1223344443210 01 234566777899998531 235799987543 358
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVTL 418 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~~ 418 (471)
+|++++.+.+.+++..
T Consensus 424 ~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 424 EEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998863
No 337
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.31 E-value=2.8e-09 Score=106.70 Aligned_cols=303 Identities=17% Similarity=0.143 Sum_probs=166.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPH 121 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pG 121 (471)
-.|.|.+++...+.+-.. .+..|. .+. .+++ .++++++++.+. .+.++|||+|+.+++... ..+|
T Consensus 41 ~~p~v~~ai~~ql~~~~~---~~~~~~--~~~---~~~l-a~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~g 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVV---AGPMFE--HEE---KEEM-LEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTG 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCC---ccCCcC--CHH---HHHH-HHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhC
Confidence 368899998877755321 111221 122 2222 256777776553 356789999999998865 3455
Q ss_pred -CEEEEeCCCCCCcccccccccCCccceeccc-----eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcC--CCCC
Q 012104 122 -DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-----YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGG--SAYP 193 (471)
Q Consensus 122 -D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-----~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~--s~~g 193 (471)
++|++++..|.|... +. +...+. .+....-++..- ...|++.+++.+. .++..|++.+ ...|
T Consensus 107 r~~Ii~~~~syHG~t~-~~-------ls~~~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~i~-~~~aAvivEpi~g~gG 176 (364)
T PRK04013 107 RKEIIAMTNAFHGRTM-GA-------LSATWKPKYREDFEPLVPGFKHI-PFNDVEAAKEAIT-KETAAVIFEPIQGEGG 176 (364)
T ss_pred CCEEEEECCccccCch-hh-------ccCCCCcccccCCCCCCCCcEEe-cCCCHHHHHHHhc-CCcEEEEEcCCcCCCC
Confidence 899999877755421 11 111110 011100011100 1237888988886 3677777653 2223
Q ss_pred -cccc---HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC-CeEEEEeeCCCCCCCC
Q 012104 194 -RDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP-RAGMIFYRKGPKPPKK 265 (471)
Q Consensus 194 -~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp-rgG~i~~~~~~~~~~~ 265 (471)
...| +++++++|+++|+++|+|+++. |+ -.|..- .-+. ..|+++. .|.|.|. ..|.++.+.+
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~------ 246 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFD------ 246 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEeccc------
Confidence 2345 8899999999999999999997 76 344321 1122 4688887 5998652 3455656552
Q ss_pred CCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCee
Q 012104 266 GQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHL 345 (471)
Q Consensus 266 ~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~ 345 (471)
+. .....+++++ +....++....++.+.++++ .+++.+. | +.+...-+.-+. +. ..+
T Consensus 247 ---------~~----~~~~~~T~~g-np~~~aaa~a~l~~i~~~~l---~~~~~~~---l-~~l~~~~v~~vR-G~-Gl~ 303 (364)
T PRK04013 247 ---------VE----RGKHGSTFGG-NPLACKAVAVTLRILRRERL---VEKAGEK---F-IEIKGERVVTTR-GR-GLM 303 (364)
T ss_pred ---------cc----CCCcCCCCCc-CHHHHHHHHHHHHHHHhccH---HHHHHHH---H-HHhccCcceeee-eC-cEE
Confidence 21 1111222333 23333333345666544333 2222221 2 233221111111 12 234
Q ss_pred EEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 346 VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 346 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+-+++.. ....+.+.+.++|+.+.+. ..+.+|+..|-. +++++++++.+.|.+++..
T Consensus 304 ~gve~~~---~~~~i~~~~~~~Gll~~~~---------g~~vlr~~Ppl~----it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 304 IGIVLKK---PVGKYVEELQNRGYLVHTA---------GQRVIRLLPPLI----ISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred EEEEeCC---cHHHHHHHHHhCCcEEeeC---------CCCEEEEeCCcc----cCHHHHHHHHHHHHHHHHH
Confidence 4456542 2456777788899998542 136799976543 4589999999999998864
No 338
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.30 E-value=2.4e-09 Score=109.65 Aligned_cols=320 Identities=15% Similarity=0.103 Sum_probs=172.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+|+...+.+-.. ...+ .+ ..+ ...+++ +++.+++....+ -.....|||+|+.+++....
T Consensus 60 ~~p~i~~Ai~~q~~~~~~-~~~~-~~--~~~---~~~~la-~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~~ 128 (428)
T PRK07986 60 NHPQLNAAMKSQIDAMSH-VMFG-GI--THP---PAIELC-RKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (428)
T ss_pred CCHHHHHHHHHHHhhcCC-cccc-cc--CCH---HHHHHH-HHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 368999998777643211 0000 00 111 122233 456666643221 23557899999998887432
Q ss_pred ---CCCCEEEEeCCCCCCcccccccccCCccceeccc------e-------eEEEeeeecCCC---CCCCHHHHHHHhhh
Q 012104 119 ---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------Y-------FESLPYKVNSST---GYIDYDKLEEKALD 179 (471)
Q Consensus 119 ---~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------~-------~~~~~~~v~~~~---~~iD~~~le~~~~~ 179 (471)
....+|+...-.|.|.- .+. ++..+. . ...++++..... ..-|++++++.++.
T Consensus 129 ~~g~~r~kii~~~~~yHG~t-~~a-------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~ 200 (428)
T PRK07986 129 AKGEPRQRFLTLRHGYHGDT-FGA-------MSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA 200 (428)
T ss_pred hcCCCCcEEEEECCCcCCCc-Hhh-------hcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh
Confidence 23478999886664431 111 111110 0 011111100000 12367788888764
Q ss_pred CC--CcEEEEcC--CC-CCcc----ccHHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCC
Q 012104 180 FR--PKLIICGG--SA-YPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLR 247 (471)
Q Consensus 180 ~~--pklIi~~~--s~-~g~~----~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~ 247 (471)
.. ...|++.+ .. .|.. -.+++|+++|+++|+++|+|++| .|+--.|..- .-+. ..|+++ +.|.|.
T Consensus 201 ~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~ 277 (428)
T PRK07986 201 HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALT 277 (428)
T ss_pred CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhh
Confidence 32 23444432 22 2322 23789999999999999999999 4762223211 1111 358886 679985
Q ss_pred CC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-----CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 012104 248 GP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-----FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (471)
Q Consensus 248 Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-----~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~ 320 (471)
|. ..|.+++++ ++.+.+.... ..+++++ +....++...+++.+.++ ++.+++.+
T Consensus 278 gG~~p~~av~~~~---------------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~L~~i~~~---~~~~~~~~ 338 (428)
T PRK07986 278 GGTMTLSATLTTR---------------EVAETISNGEAGCFMHGPTFMG-NPLACAVANASLSLLESG---DWQQQVAA 338 (428)
T ss_pred CCcccCcchhchH---------------HHHHHhhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence 42 344455665 3444443211 1222333 333334444456655432 35667777
Q ss_pred HHHHHHHHHHcC-CceEeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 321 NAVALGNYLTGK-GYSLVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 321 na~~l~~~L~~~-g~~i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
+.++|.+.|++. .+..+.. .....++.+.+... .....+.+.|.++||.+.+. .+.+|+..|-.
T Consensus 339 ~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~-~~~~~~~~~l~~~Gl~~~~~----------g~~i~~~Ppl~--- 404 (428)
T PRK07986 339 IEAQLREELAPLRDAPMVADVRVLGAIGVVETTRP-VNMAALQRFFVEQGVWIRPF----------GKLIYLMPPYI--- 404 (428)
T ss_pred HHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCc-ccHHHHHHHHHHCCcEEEec----------CCEEEEeCCCC---
Confidence 778888888764 2332221 01133444555432 23556788888999998642 25799975543
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~~ 418 (471)
++++|++++.+.+.+++..
T Consensus 405 -it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 405 -ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred -CCHHHHHHHHHHHHHHHhh
Confidence 3589999999999998864
No 339
>PRK06062 hypothetical protein; Provisional
Probab=99.30 E-value=5.2e-09 Score=108.02 Aligned_cols=319 Identities=13% Similarity=0.044 Sum_probs=166.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+..- . +....+ . .+ ...++ .+++.+++....+ -...+.|||+|+.+++... ....
T Consensus 71 ~p~v~~Ai~~q~~~~-~--~~~~~~-~-~~---~~~~l-ae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~tgr 138 (451)
T PRK06062 71 HPKVVAAIQEQAARL-C--TVAPAH-A-ND---ARSEA-ARLIAERAPGDLS---KVFFTNGGADANEHAVRMARLHTGR 138 (451)
T ss_pred CHHHHHHHHHHHHhc-C--CcCCcc-C-CH---HHHHH-HHHHHHhCCCCCC---EEEEcCChHHHHHHHHHHHHHhhCC
Confidence 688988887776432 1 111111 1 11 11223 2456666542221 2355789999999988753 2234
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccc-----------eeEEEeee--ecC-CCCCCC-------HHHHHHHhhhC
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-----------YFESLPYK--VNS-STGYID-------YDKLEEKALDF 180 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-----------~~~~~~~~--v~~-~~~~iD-------~~~le~~~~~~ 180 (471)
.+|+...-.|.|.-. +. ++..+. .+..++++ ... ....-| ++.+++++...
T Consensus 139 ~~ii~~~~~yHG~t~-~a-------ls~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 210 (451)
T PRK06062 139 PKVLSAYRSYHGGTG-SA-------INLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE 210 (451)
T ss_pred ceEEEEeCCCCCCCH-HH-------HhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc
Confidence 678888765544311 11 111110 00111111 000 000012 67788887532
Q ss_pred ---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeCCCCcCCC
Q 012104 181 ---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRG 248 (471)
Q Consensus 181 ---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s~~K~l~G 248 (471)
++..|++. .+..|...+ +++++++|+++|+++|+|++|. |+--.|.. ..-+. ..|++++ .|.|.|
T Consensus 211 ~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~--gK~lgg 287 (451)
T PRK06062 211 GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITF--AKGVNS 287 (451)
T ss_pred CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeee--chhhhc
Confidence 34456654 344566666 8899999999999999999997 65212221 01112 4687764 699876
Q ss_pred C--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCC--CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-H
Q 012104 249 P--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVF--PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANA-V 323 (471)
Q Consensus 249 p--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~--~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na-~ 323 (471)
. ..|.+++++ ++.+.+....+ .+++++. ....++..++++.+.+++ ..+++.+.. +
T Consensus 288 G~~Pigav~~~~---------------~i~~~~~~~~~~~~~T~~gn-pl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~ 348 (451)
T PRK06062 288 GYVPLGGVAISE---------------AIAATFADRPYPGGLTYSGH-PLACAAAVATINAMEEEG---IVENAARIGAE 348 (451)
T ss_pred CCcCcEEEEEcH---------------HHHHHhccCCCCCCCCCCCC-HHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 2 344555555 34443432211 1233332 333334334566554332 344444443 3
Q ss_pred HHHHHHHcC--CceEee--CCCCCeeEEEEccCC-----CCC--------HHHHHHHHhhcCeEeccCCcCCCCCCCCCC
Q 012104 324 ALGNYLTGK--GYSLVT--GGTENHLVLWDLRPL-----GLT--------GNKVEKLCDLCNITVNKNAVFGDSSALAPG 386 (471)
Q Consensus 324 ~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~-----~~~--------~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 386 (471)
+|.+.|++. .+.++. .+.+ .++-+.+... .++ ...+.+.|.+.||.+.+. .+
T Consensus 349 ~l~~~L~~l~~~~~~v~~vrG~G-l~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----------~~ 417 (451)
T PRK06062 349 VLGPGLRELAERHPSVGEVRGLG-VFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN----------GN 417 (451)
T ss_pred HHHHHHHHHHhcCCcEEeEeccc-cEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec----------CC
Confidence 555555542 122211 1222 2333444211 111 235677788899987531 25
Q ss_pred eeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 387 GVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 387 ~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+||..+.. ++++|++++.+.+.++++..
T Consensus 418 ~lrl~ppl~----~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 418 RIHVVPPCT----VTEDEVREGLAILDAALAVA 446 (451)
T ss_pred EEEEECCcc----CCHHHHHHHHHHHHHHHHHh
Confidence 799976544 35899999999999988753
No 340
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=3.9e-09 Score=108.20 Aligned_cols=320 Identities=13% Similarity=0.055 Sum_probs=172.4
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|+|.+++...+.+-. +.....+. + +...+++ +++.+++....+ -...+.||++|+.+++....
T Consensus 61 ~~p~v~~ai~~q~~~~~---~~~~~~~~-~---~~~~~la-e~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 129 (429)
T PRK06173 61 NHPRLNAAATNQLAKMS---HIMFGGFT-H---EPAVELA-QKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQQ 129 (429)
T ss_pred CCHHHHHHHHHHHHhcC---CccccccC-C---HHHHHHH-HHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 36889888877664321 10000010 1 1112233 455566532211 23557899999998886532
Q ss_pred ---CCC-CEEEEeCCCCCCcccccccccCCccceeccc-------------eeEEEeeeecCCC---CCCCHHHHHHHhh
Q 012104 119 ---EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-------------YFESLPYKVNSST---GYIDYDKLEEKAL 178 (471)
Q Consensus 119 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-------------~~~~~~~~v~~~~---~~iD~~~le~~~~ 178 (471)
++| .+|+...-.|.|. +.+. ++.++. ....++++..... ..-+++.+++.+.
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~-t~~a-------~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~ 201 (429)
T PRK06173 130 AKGEVQRTKFATIRSGYHGD-TWHA-------MSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLE 201 (429)
T ss_pred HhCCCCCcEEEEECCCcCCc-chhh-------hccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHH
Confidence 133 6788888666543 1111 111110 0111121100000 0114666777775
Q ss_pred hC--CCcEEEEcC---CCCCccc-c---HHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeCCCCcC
Q 012104 179 DF--RPKLIICGG---SAYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSL 246 (471)
Q Consensus 179 ~~--~pklIi~~~---s~~g~~~-d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s~~K~l 246 (471)
.+ +...|++.+ ...|... | +++++++|+++|+++|+|++| .|+--.|.. ..-+. ..||++ +.|.|
T Consensus 202 ~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l 278 (429)
T PRK06173 202 QKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKAL 278 (429)
T ss_pred hCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhh
Confidence 32 334555442 2223322 2 578899999999999999999 585222321 11112 368887 67998
Q ss_pred CCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc-----CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Q 012104 247 RGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA-----VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVK 319 (471)
Q Consensus 247 ~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~-----~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~ 319 (471)
.|. ..+.++.++ ++.+.+... .+.+++++ +....++...+++.+.++ ...+++.
T Consensus 279 ~gG~~p~~a~~~~~---------------~i~~~~~~~~~~~~~~~~T~~g-~p~~~aaa~a~l~~i~~~---~~~~~~~ 339 (429)
T PRK06173 279 TGGYLTLSATITTE---------------AIAQTICSGEAKCFMHGPTFMA-NPLACAIAAESIRLLLES---PWQQNIQ 339 (429)
T ss_pred hCCccccceEEecH---------------HHHHHHhcCCCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 542 344555554 333333210 11112233 333444444466655432 3466777
Q ss_pred HHHHHHHHHHHcC-CceEeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCC
Q 012104 320 ANAVALGNYLTGK-GYSLVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTS 397 (471)
Q Consensus 320 ~na~~l~~~L~~~-g~~i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~ 397 (471)
++.++|.+.|++. ++..+.. ...++++-+.+... .+...+.+.|.+.||.+.+. .+.|||..|-.
T Consensus 340 ~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-~~~~~i~~~l~e~Gi~v~~~----------g~~l~~~Ppl~-- 406 (429)
T PRK06173 340 RIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-VNMATLQPRFVEHGIWVRPF----------GKLVYIMPPFI-- 406 (429)
T ss_pred HHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEeCCcc--
Confidence 8888888888764 4543321 01344555666432 23567788888899998542 25799976543
Q ss_pred cCCCHHHHHHHHHHHHHHHHH
Q 012104 398 RGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 398 ~g~~~~d~~~l~~~i~~~l~~ 418 (471)
++++|++++.+.+.+++..
T Consensus 407 --it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 407 --ISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred --CCHHHHHHHHHHHHHHHHH
Confidence 4589999999999998864
No 341
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.26 E-value=2.2e-09 Score=103.78 Aligned_cols=339 Identities=18% Similarity=0.160 Sum_probs=166.3
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhh---hccC--CCCCCCCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCC
Q 012104 32 RGIELIASENFTSFAVIEALGSAL---TNKY--SEGMPGNRYY-GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYS 105 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l---~~~~--~~g~~~~r~~-~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~s 105 (471)
..|+|--+-.-.|++=++.-...+ ...+ .+| ...|.| |+.+.+.++ ++.+++++|++.+ +|...+
T Consensus 23 ~~L~LdmtRGKPs~eQLdLS~~lL~~~~~~~~~~dG-~D~RNY~G~l~Gipe~----r~l~a~llgv~~~----~viv~g 93 (425)
T PF12897_consen 23 KGLKLDMTRGKPSPEQLDLSNPLLDLPGSSDYLADG-TDCRNYPGGLDGIPEA----RELFAELLGVPPE----NVIVGG 93 (425)
T ss_dssp TT--EES---S--HHHHHGGGGGGGSSTTCCBECTT-EBTTSS-S-SS--HHH----HHHHHHHHTS-GG----GEEE-S
T ss_pred cCCCcccCCCCCCHHHHhhhHHHhcCCCCccccCCC-ccccCCCCccCChHHH----HHHHHHHhCCCHH----HEEEec
Confidence 456665454455555444322222 1111 123 245888 776766544 4678899999985 343322
Q ss_pred hH--HHHH-HHHHHhc----C--------CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCH
Q 012104 106 GS--PANF-AAYTAVL----E--------PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDY 170 (471)
Q Consensus 106 Gt--~A~~-~~~~all----~--------pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~ 170 (471)
.| +-++ ++..+++ . +.=+.|++.|.|--|++ .....| ++.++++.++ ...|+
T Consensus 94 NSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa---------i~E~~G--iemi~VpM~~--dGPDm 160 (425)
T PF12897_consen 94 NSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA---------ITEHFG--IEMIPVPMTE--DGPDM 160 (425)
T ss_dssp S-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH---------HHHHCT---EEEEEEEET--TEE-H
T ss_pred cchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH---------HHHhhC--cEEEecCCCC--CCCCH
Confidence 22 2222 2222321 1 12357888988887763 122334 4666666663 35899
Q ss_pred HHHHHHhh-hCCCcEEEEc---CCCCCccccHHHHHHHHH----HhCCEEEEeccccchhhccc-cCC---CCCC-----
Q 012104 171 DKLEEKAL-DFRPKLIICG---GSAYPRDWDYARFRAVAD----KCGALLLCDMAHISGLVAAQ-EAA---NPFE----- 233 (471)
Q Consensus 171 ~~le~~~~-~~~pklIi~~---~s~~g~~~d~~~i~~ia~----~~g~~livD~a~~~glv~~g-~~~---~p~~----- 233 (471)
|.+|++.. +...|-|+|. .||+|.+++-+.++++|. ..+..|+-|.||+..-.+.. ... +.+.
T Consensus 161 D~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~A 240 (425)
T PF12897_consen 161 DMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKA 240 (425)
T ss_dssp HHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHT
T ss_pred HHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHc
Confidence 99999985 3456888876 689999998887777773 46999999999986644321 111 1111
Q ss_pred -Ccc--EEEeCCCCc-CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCc-HHHHHHHHHHHHHhcc
Q 012104 234 -YCH--IVTTTTHKS-LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPH-NHQIGALAVALKQAST 308 (471)
Q Consensus 234 -~aD--iv~~s~~K~-l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~-~~~iaa~a~al~~~~~ 308 (471)
+.| ++.+||+|- ++|-..+++.++.. .+........... . +|. .+++.-. .-|+..
T Consensus 241 Gnpdrv~~F~STSKITf~GaGva~~aaS~~--------------Nl~~~~~~~~~~t-I-gpdKvNQLRHv-rff~d~-- 301 (425)
T PF12897_consen 241 GNPDRVYVFASTSKITFPGAGVAFFAASEA--------------NLAWIKKHLSVQT-I-GPDKVNQLRHV-RFFKDA-- 301 (425)
T ss_dssp T-TTSEEEEEESTTTS-TTSS-EEEEE-HH--------------HHHHHHHHHHHH--S----HHHHHHHH-HHHHSH--
T ss_pred CCCCeEEEEecccccccCCcceeeeecCHH--------------HHHHHHHHhcCce-e-CccHHHHHHHH-HHhcCh--
Confidence 234 778899998 78876688877763 2221111111111 1 222 2332211 122221
Q ss_pred H-HHHHHHHHHHH--------HHHHHHHHHH-cCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccC--Cc
Q 012104 309 P-AFKAYAKQVKA--------NAVALGNYLT-GKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKN--AV 376 (471)
Q Consensus 309 ~-~~~~~~~~~~~--------na~~l~~~L~-~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~--~~ 376 (471)
+ ++++..++..+ ..+.|.++|. ..|+--.+.+.+.++++++..+ | +...+.+++.++||.+.+. +.
T Consensus 302 ~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~-G-~AkrvV~lakeAGV~LT~AGAtf 379 (425)
T PF12897_consen 302 EGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD-G-TAKRVVELAKEAGVALTPAGATF 379 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-T--HHHHHHHHHHTTEE---TTTTS
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-C-hHHHHHHHHHHhCceeCCCCCCC
Confidence 2 33333333222 2345666666 4455444567788899998754 4 6788999999999999873 35
Q ss_pred CCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 377 FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 377 p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
|....| ..+.|||..+.. ..+|++...+.+.-|++..
T Consensus 380 Pyg~DP-~D~nIRiAPS~P-----~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 380 PYGKDP-RDSNIRIAPSYP-----SLEELETAMDVFATCVKLA 416 (425)
T ss_dssp GGG--T-TS-EEEE--SSS------HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCC-CCCcEEecCCCC-----CHHHHHHHHHHHHHHHHHH
Confidence 543333 357999986432 2588999888888887764
No 342
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.25 E-value=1.6e-08 Score=104.68 Aligned_cols=313 Identities=14% Similarity=0.082 Sum_probs=163.3
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-CCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
.|.|.+++...+......+. .++ .++| + .+++.+.+. .+. ...+.|||+|+..++... ...
T Consensus 117 ~p~v~~av~~ql~~~~~~~~-------~~~--~~~~-l-Ae~l~~~~p~~~~-----v~f~~SGsEA~e~AlklAR~~tg 180 (474)
T PLN02482 117 DDEVLAALAETMKKGTSFGA-------PCL--LENV-L-AEMVIDAVPSVEM-----VRFVNSGTEACMGVLRLARAYTG 180 (474)
T ss_pred CHHHHHHHHHHHhhCCCCCC-------CCH--HHHH-H-HHHHHHhCCCCCE-----EEEeCChHHHHHHHHHHHHHhcC
Confidence 58888888877754321111 111 1222 2 355566653 222 345789999999888754 223
Q ss_pred CCEEEEeCCCCCCccc-ccccccCCcc-c---eecccee----EEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEc-
Q 012104 121 HDRIMGLDLPSGGHLT-HGYYTSGGKK-I---SATSIYF----ESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICG- 188 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s-~~~~~~~g~~-~---~~~g~~~----~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~- 188 (471)
.++|+...-.|.|+.. .+.....+.. . ...+... .++.+ ..-|++.+++.+..+ +...|++.
T Consensus 181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~nd~~~l~~~l~~~~~~iAavI~Ep 254 (474)
T PLN02482 181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTA------PYNDLEAVKKLFEANKGEIAAVILEP 254 (474)
T ss_pred CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEe------cCCChHHHHHHHHhCCCceEEEEECC
Confidence 4688888766644321 0000000000 0 0000000 00111 123889999888653 23455654
Q ss_pred -CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCC-CCeEEEEeeCC
Q 012104 189 -GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKG 259 (471)
Q Consensus 189 -~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~ 259 (471)
.+..|...+ +++++++|+++|+++|+|++|. |+.. |..- .-+. ..|++++ .|.|.| ...|.+++++
T Consensus 255 v~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~-g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~- 329 (474)
T PLN02482 255 VVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRI-AYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR- 329 (474)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Ceec-CcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH-
Confidence 344454444 4689999999999999999995 8732 2110 0112 3688654 699865 2234556766
Q ss_pred CCCCCCCCCCCcccchHhhhhhc--CC-CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC----
Q 012104 260 PKPPKKGQPEGAVYDFEDKINFA--VF-PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK---- 332 (471)
Q Consensus 260 ~~~~~~~~~~i~~~~l~~~i~~~--~~-~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~---- 332 (471)
++.+.+... .+ .+++++ +....++...+|+.+.++ +..+++.++.++|++.|++.
T Consensus 330 --------------ei~~~~~~~~~~~~~~T~~g-npl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~ 391 (474)
T PLN02482 330 --------------EIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKA 391 (474)
T ss_pred --------------HHHHhhccCCCcccccCcch-hHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhc
Confidence 444444321 11 112222 233333433456665442 35566667777777777654
Q ss_pred CceEeeCCCCCeeEEEEccCCC---------CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCC
Q 012104 333 GYSLVTGGTENHLVLWDLRPLG---------LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGL 400 (471)
Q Consensus 333 g~~i~~~~~~~~~~~v~~~~~~---------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~ 400 (471)
|+.++.++... ++-+.+.... -+ ...+.+.|.++||.+.+...+ . +++. ...
T Consensus 392 g~~~~~~~v~g-~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~--------~----~~ps---l~h 455 (474)
T PLN02482 392 GHEMCGGYISG-MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFE--------A----GFTS---LAH 455 (474)
T ss_pred CCCEEEcccce-EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCC--------C----CcCC---CCC
Confidence 44443222112 3223222110 12 124567777899998653211 0 1121 234
Q ss_pred CHHHHHHHHHHHHHHHH
Q 012104 401 LEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 401 ~~~d~~~l~~~i~~~l~ 417 (471)
+++|++++.+.+.+++.
T Consensus 456 t~~dId~~l~al~~~l~ 472 (474)
T PLN02482 456 TEEDIDFTIAAAERVLA 472 (474)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 68999999999998875
No 343
>PRK07046 aminotransferase; Validated
Probab=99.25 E-value=1.3e-08 Score=105.14 Aligned_cols=317 Identities=12% Similarity=0.093 Sum_probs=166.0
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+......+.+ + ..+....+++.++++.+. ...++|||+|+..++... ....
T Consensus 93 ~p~i~~Av~~q~~~~~~~~~~-------~----~~~~~lAe~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TGr 156 (453)
T PRK07046 93 PAPVARALAEQARRGLTTMLP-------S----EDAAWVGEELARRFGLPY-----WQVATTATDANRFVLRWARAVTGR 156 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCCC-------C----HHHHHHHHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhCC
Confidence 588888887776543321211 1 112223356667776543 355789999999888754 2345
Q ss_pred CEEEEeCCCCCCcccccccc-cCCccc---eeccceeEEE-eeeecCCCCCCCHHHHHHHhhhCCCcEEEEc--CCCCCc
Q 012104 122 DRIMGLDLPSGGHLTHGYYT-SGGKKI---SATSIYFESL-PYKVNSSTGYIDYDKLEEKALDFRPKLIICG--GSAYPR 194 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~-~~g~~~---~~~g~~~~~~-~~~v~~~~~~iD~~~le~~~~~~~pklIi~~--~s~~g~ 194 (471)
++|+...-.|.|+....... ..+... ...|...... ...+- ..-|++.+++.+...+...|++. ....|.
T Consensus 157 ~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~ 233 (453)
T PRK07046 157 PKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVV---EFNDLAALEAALADGDVAAVLAEPAMTNIGM 233 (453)
T ss_pred CEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEee---CCCCHHHHHHHhCCCCeEEEEECCCCCCCCC
Confidence 78988886665541100000 000000 0001000000 00000 12489999998854445566655 233344
Q ss_pred ccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEEeCCCCcCCC-CCeEEEEeeCCCCCCCCCCC
Q 012104 195 DWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKGPKPPKKGQP 268 (471)
Q Consensus 195 ~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~~~~~~~~~~ 268 (471)
..+ +++++++|+++|+++|.|+++..++-.+|. ..-+. ..|+++ +.|.|.| ...|.+++++
T Consensus 234 ~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~---------- 300 (453)
T PRK07046 234 VLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TRAHGLEPDFLV--VGKPIAGGVPCAVYGFSA---------- 300 (453)
T ss_pred cCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hHHhCCCcccee--ehhhhcCCCcceeeeehH----------
Confidence 433 689999999999999999998522111121 11112 468886 4699864 3457777776
Q ss_pred CCcccchHhhhhhc-------C--CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc----CCce
Q 012104 269 EGAVYDFEDKINFA-------V--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KGYS 335 (471)
Q Consensus 269 ~i~~~~l~~~i~~~-------~--~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~----~g~~ 335 (471)
++.+.+... . ..++.++ +....++..+.++.+.+++ ..+++.+..++|++.|++ .++.
T Consensus 301 -----~i~~~~~~~~~~~~~~~~~~~~T~~g-npl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~ 371 (453)
T PRK07046 301 -----ELAERAQAAKASAPPGHSGIGTTLSA-NALAMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLP 371 (453)
T ss_pred -----HHHHHHhhccccCCCCCceeCCCCcc-cHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 444444311 0 1112222 2333333334566554433 345555566666666653 3543
Q ss_pred EeeCCCCCeeEEEEccCCC----------CCH---HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCH
Q 012104 336 LVTGGTENHLVLWDLRPLG----------LTG---NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLE 402 (471)
Q Consensus 336 i~~~~~~~~~~~v~~~~~~----------~~~---~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~ 402 (471)
....+.+. ++.+.+.... .+. ..+...|.++||.+.+. .+.++++.+ +++
T Consensus 372 ~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----------~~~~~~~p~------~t~ 434 (453)
T PRK07046 372 WHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF----------HNMMLVCPA------TTA 434 (453)
T ss_pred eEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc----------cCcEEEeCC------CCH
Confidence 21112222 2333332111 011 23455667789998541 134777652 458
Q ss_pred HHHHHHHHHHHHHHHH
Q 012104 403 KDFEQIGEFLHRAVTL 418 (471)
Q Consensus 403 ~d~~~l~~~i~~~l~~ 418 (471)
+|++++.+.+++++..
T Consensus 435 ~did~~~~~~~~~l~~ 450 (453)
T PRK07046 435 ADVDRLVAAFDACLGE 450 (453)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998864
No 344
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.25 E-value=1.6e-08 Score=103.89 Aligned_cols=311 Identities=14% Similarity=0.081 Sum_probs=164.9
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+|+.+.+......+++ ++. . .++ .+++.+++.- .+ -...++||++|+.+++... ....
T Consensus 71 ~p~v~~ai~~q~~~~~~~~~~-------~~~--~-~~l-a~~l~~~~p~-~~---~v~f~~sGseA~e~AlklAr~~tgr 135 (428)
T PRK12389 71 HPHITKAITEAAENGVLYGTP-------TEL--E-IEF-AKMLKEAIPS-LE---KVRFVNSGTEAVMTTIRVARAYTGR 135 (428)
T ss_pred CHHHHHHHHHHHHhCCccCCC-------CHH--H-HHH-HHHHHHhCCC-Cc---EEEEeCCHHHHHHHHHHHHHHhhCC
Confidence 688998888777532111111 111 1 222 3455555531 11 2355789999999988754 2334
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccce-eE---EEeeeec----CCC---CCCCHHHHHHHhhhC--CCcEEEEc
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY-FE---SLPYKVN----SST---GYIDYDKLEEKALDF--RPKLIICG 188 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-~~---~~~~~v~----~~~---~~iD~~~le~~~~~~--~pklIi~~ 188 (471)
.+|+...-.|.|.-. +. ++..+.. .. ....++. ++. ...|++.+++.+.++ ++..|++.
T Consensus 136 ~~ii~~~~~yHG~t~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 136 TKIIKFAGCYHGHSD-LV-------LVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred CEEEEECCCcCCChH-HH-------HHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 688888765544311 10 1111100 00 0000000 000 123789999888643 23455554
Q ss_pred --CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC--CCCCC-CccEEEeCCCCcCCC-CCeEEEEeeC
Q 012104 189 --GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA--ANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRK 258 (471)
Q Consensus 189 --~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~--~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~ 258 (471)
.+..|...+ +++++++|+++|+++|+|++|. |+.. +.. ..-+. ..|+++ +.|.|.| ...|.+++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt-~~~~a~~~~gv~PDivt--~gK~lggG~Pi~av~~~~ 283 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFRF-MYGGAQDLLGVEPDLTA--LGKIIGGGLPIGAYGGRK 283 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-cccc-CcchhhHHhCCCCCeee--echhhcCCCceeEEeEHH
Confidence 445566666 8899999999999999999997 6522 111 11112 468865 4699865 2245556766
Q ss_pred CCCCCCCCCCCCcccchHhhhhh--cCC-CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc----
Q 012104 259 GPKPPKKGQPEGAVYDFEDKINF--AVF-PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG---- 331 (471)
Q Consensus 259 ~~~~~~~~~~~i~~~~l~~~i~~--~~~-~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~---- 331 (471)
++.+.+.. ..+ .+++++ +....++..++++.+.++ +..+++.++.++|.+.|++
T Consensus 284 ---------------~i~~~~~~~~~~~~~~T~~g-npl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~ 344 (428)
T PRK12389 284 ---------------DIMEQVAPLGPAYQAGTMAG-NPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEK 344 (428)
T ss_pred ---------------HHHhhhccCCCcccccCCcc-CHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444431 111 122232 233333333456665443 3556677777777777764
Q ss_pred CCceE-eeCCCCCeeEEEEccCCCC---------C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 332 KGYSL-VTGGTENHLVLWDLRPLGL---------T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 332 ~g~~i-~~~~~~~~~~~v~~~~~~~---------~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
.++.. +.++.. ++-+.+..... + ...+.+.|.++||.+.+.. .+.+.+. +
T Consensus 345 ~~~~~~v~r~~g--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------~~~~~~~---l--- 407 (428)
T PRK12389 345 HGITITINRLKG--ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK---------YEAWFLT---T--- 407 (428)
T ss_pred CCCCEEEEecCc--EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC---------CCCeeec---C---
Confidence 34322 112222 33333321111 1 2346777788999986531 1123322 1
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~ 417 (471)
-.+++|++++.+.+.++++
T Consensus 408 ~~t~e~id~~~~~l~~~l~ 426 (428)
T PRK12389 408 AHTEEDIEETLEAVDRAFA 426 (428)
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 2468999999999998875
No 345
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.25 E-value=4.7e-09 Score=105.30 Aligned_cols=286 Identities=19% Similarity=0.165 Sum_probs=142.1
Q ss_pred HHHHHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHh---cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEE
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~ 157 (471)
-+..++++.|.+. +|.....| +.+-.+++++. -+.+++|+++.-.|+.+... . .....+.+++++
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v-~------~t~a~~~g~~iv 183 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAV-L------RTYAAPLGIEIV 183 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHH-H------HHHCCHCCEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHH-H------HHhhhhCCeEEE
Confidence 3578999999986 44444333 33333444433 33457999999777755421 0 112334556777
Q ss_pred eeeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Cc
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YC 235 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~a 235 (471)
.++.+ +++..| ..++..|+ .++|.+|...|+++|.++++++|+++++ .+ .+.+-+...+|-+ ++
T Consensus 184 ~~~~~-~~~~~d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~a---d~~aL~~l~~Pge~GA 249 (429)
T PF02347_consen 184 EVPLD-EDGTTD---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GA---DPNALGGLKSPGEYGA 249 (429)
T ss_dssp EE-BB-TTCSB----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CG---GCCGCCTC--GGGGT-
T ss_pred Eeccc-ccCCcc---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ec---CHHHHhCcCChhhcCc
Confidence 77666 345555 23455444 5688899999999999999999999987 54 3334344556666 89
Q ss_pred cEEEeCCCCcC------CCCCeEEEEeeCCCCCCCC----------CCCCCcccch---HhhhhhcCCCCCCCCCcHHHH
Q 012104 236 HIVTTTTHKSL------RGPRAGMIFYRKGPKPPKK----------GQPEGAVYDF---EDKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 236 Div~~s~~K~l------~GprgG~i~~~~~~~~~~~----------~~~~i~~~~l---~~~i~~~~~~~~~g~p~~~~i 296 (471)
||++++ ||+| .||..|++.+++.+...-+ .|+.-....+ .+-|++-.-....++ ++.+
T Consensus 250 DI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIct--nqaL 326 (429)
T PF02347_consen 250 DIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICT--NQAL 326 (429)
T ss_dssp SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---S--S-HH
T ss_pred cEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhh--hHHH
Confidence 999777 8873 5677799999886532111 1221100011 112322111111122 1222
Q ss_pred HHH--HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEecc
Q 012104 297 GAL--AVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNK 373 (471)
Q Consensus 297 aa~--a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~ 373 (471)
.|+ ++-+..+..+++++..++...++.++++.|.+. ++.+ .+..-...+... .. . ..+.+ |.+.++.-.-
T Consensus 327 ~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e~v~~~-~~-~---~~~~~-l~~~~~~~gl 399 (429)
T PF02347_consen 327 LALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFEFVVVF-SK-D---KEVEE-LLKRGIEGGL 399 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSSEEEEE-SS-----HHHHH-HHHTT----E
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCceeeeeec-CC-c---HHHHH-HHHHHHhcCC
Confidence 221 122334456689999999999999999999986 3332 221111123332 22 1 33333 3333343321
Q ss_pred CC-cCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 374 NA-VFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 374 ~~-~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+. .+ ..+.+-+++...+ +++|++++++++
T Consensus 400 ~~~~~------~~~~~li~~TE~~----t~edid~lv~~f 429 (429)
T PF02347_consen 400 NLRYP------DDGALLICVTETR----TKEDIDRLVEAF 429 (429)
T ss_dssp EEGGG-------SSEEEEE--TT------HHHHHHHHH--
T ss_pred Ccccc------CCCeEEEEccCCC----CHHHHHHHHhcC
Confidence 10 11 1246667664444 479999998864
No 346
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.24 E-value=5.4e-10 Score=103.72 Aligned_cols=228 Identities=18% Similarity=0.204 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCCCEEEEeC-CCCCCccc-ccccccCCccceeccc
Q 012104 75 IDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLD-LPSGGHLT-HGYYTSGGKKISATSI 152 (471)
Q Consensus 75 ~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~-~~~~g~~s-~~~~~~~g~~~~~~g~ 152 (471)
.|.+| +-.++.||++.+- |-+|..|||+|+..++..+|+|||++|... -+|--... -|......-.+.-.|.
T Consensus 67 RdtLe----~vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi 140 (416)
T COG4100 67 RDTLE----RVYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGI 140 (416)
T ss_pred hhHHH----HHHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCc
Confidence 35565 3467899999853 566778999999999999999999998753 12210000 0000000001112244
Q ss_pred eeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc----C--CCCCccccHHHHHHHHHHh--CCEEEEeccccchhhc
Q 012104 153 YFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICG----G--SAYPRDWDYARFRAVADKC--GALLLCDMAHISGLVA 224 (471)
Q Consensus 153 ~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~----~--s~~g~~~d~~~i~~ia~~~--g~~livD~a~~~glv~ 224 (471)
.|+.+++ . .++.+|++.+...+. .++|+|.+. + -|.-.+.+++++.++.++. +++++||.+|. .++-
T Consensus 141 ~Y~~v~L--t-~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-EFvE 215 (416)
T COG4100 141 KYKAVPL--T-ADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-EFVE 215 (416)
T ss_pred ceeeccc--c-cCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-hhhh
Confidence 4555554 2 358999999999997 479998743 2 2223334556666666665 79999999986 4443
Q ss_pred cccCCCCCC-CccEEEeCCCCcCCCC---CeEEEEeeCCCCCCCCCCCCCcccchHhhhh-hcCCCCCC--CCCcHHHHH
Q 012104 225 AQEAANPFE-YCHIVTTTTHKSLRGP---RAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN-FAVFPSLQ--GGPHNHQIG 297 (471)
Q Consensus 225 ~g~~~~p~~-~aDiv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~-~~~~~~~~--g~p~~~~ia 297 (471)
. ..|.. ++|++.+|+-|.-.|. -||++..+++ +.+... +...||.. ++....
T Consensus 216 ~---~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~---------------~ve~~~yRlTaPGIG~e~Gat~~--- 274 (416)
T COG4100 216 E---KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAE---------------LVEAAAYRLTAPGIGREGGATLY--- 274 (416)
T ss_pred c---cCccccchhhhccceeeCCCCceeeccceeechHH---------------HHHhhceeeecCCccccccccHH---
Confidence 2 23444 8999999999985443 4788888773 333221 12234432 222222
Q ss_pred HHHHHHHHhccHHH--HHHHHHHHHHHHHHHHHHHcCCceEee
Q 012104 298 ALAVALKQASTPAF--KAYAKQVKANAVALGNYLTGKGYSLVT 338 (471)
Q Consensus 298 a~a~al~~~~~~~~--~~~~~~~~~na~~l~~~L~~~g~~i~~ 338 (471)
+++++-+.-| .....+..+-+...+..|.++|+++.+
T Consensus 275 ----~l~~myqGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P 313 (416)
T COG4100 275 ----SLREMYQGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNP 313 (416)
T ss_pred ----HHHHHHhhhccchHHHHHHhhhhHHHHHHHHHcCCCCCC
Confidence 2333222111 344556666777777888888998743
No 347
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.24 E-value=2.3e-09 Score=108.61 Aligned_cols=303 Identities=19% Similarity=0.180 Sum_probs=182.2
Q ss_pred HHHHHHhcCCCCCCCceeeecCChHH---HHHHHHHHhc---CCCCEEEEeCCCCCCcccccccccCCccceeccceeEE
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGSP---ANFAAYTAVL---EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFES 156 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt~---A~~~~~~all---~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~ 156 (471)
.+.++++.|-+. +.+||.||.+ |-+.++.+.+ ..|.+=+++-|.. . ||- .+.+..-.+.++
T Consensus 588 e~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvS-A---HGT-----NPASA~Magmkv 654 (1001)
T KOG2040|consen 588 EKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVS-A---HGT-----NPASAAMAGMKV 654 (1001)
T ss_pred HHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeec-c---cCC-----ChhhHHhcCCEE
Confidence 367888889886 6899999986 4445566654 2343333333321 1 221 233444445678
Q ss_pred EeeeecCCCCCCCHHHHHHHhhhCCCc--EEEEc-CCCCCcc-ccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC
Q 012104 157 LPYKVNSSTGYIDYDKLEEKALDFRPK--LIICG-GSAYPRD-WDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (471)
Q Consensus 157 ~~~~v~~~~~~iD~~~le~~~~~~~pk--lIi~~-~s~~g~~-~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~ 232 (471)
++++++ .+|.||+.+|++++.+++-+ .+++. +|.+|.. .+++++.++.+++|--+..|+|.-...+ ....|-
T Consensus 655 vpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV---Glc~pG 730 (1001)
T KOG2040|consen 655 VPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV---GLCRPG 730 (1001)
T ss_pred EEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcccee---cccCCc
Confidence 888877 67999999999999877654 33333 6667754 4689999999999999999998642211 123454
Q ss_pred C-CccEEEeCCCCcCCCCCe------EEEEeeCCCCCCCCCCCCCccc--chHhhhhh-cCCCCCCCCCcHHHHHHHHHH
Q 012104 233 E-YCHIVTTTTHKSLRGPRA------GMIFYRKGPKPPKKGQPEGAVY--DFEDKINF-AVFPSLQGGPHNHQIGALAVA 302 (471)
Q Consensus 233 ~-~aDiv~~s~~K~l~Gprg------G~i~~~~~~~~~~~~~~~i~~~--~l~~~i~~-~~~~~~~g~p~~~~iaa~a~a 302 (471)
+ ++|+.--.+||+|+=|.| |=|-+++.+.+..++.+-+.-. +-...+.. ...| .|+.....|.. +-
T Consensus 731 d~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP--~Gsa~ILpISw--aY 806 (1001)
T KOG2040|consen 731 DIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAP--WGSALILPISW--AY 806 (1001)
T ss_pred cccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccC--CCcceeehhHH--HH
Confidence 5 799999999999754443 4454554433332222111100 00000100 0011 12222222211 23
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeC---CCCCeeEEEEccC----CCCCHHHHHHHHhhcCeEeccCC
Q 012104 303 LKQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTG---GTENHLVLWDLRP----LGLTGNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 303 l~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~---~~~~~~~~v~~~~----~~~~~~~~~~~L~~~gI~v~~~~ 375 (471)
++.+...++++-.+-..-|+.+++++|+.. ++++.. +...|-+++|+++ .|+...++.++|.+.|.....-+
T Consensus 807 ikmMG~~GL~~as~~AiLNaNYMakRLe~h-Ykil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTms 885 (1001)
T KOG2040|consen 807 IKMMGSGGLKDASKIAILNANYMAKRLESH-YKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMS 885 (1001)
T ss_pred HHHhcccccchhhHHHhhhhHHHHHHHhhc-cceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccc
Confidence 445555567666666788999999999875 454432 2345667888865 36888899999999999876655
Q ss_pred cCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 376 VFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 376 ~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
+|- .+.+-|-. |..-..+|++|+.+++-.+-+
T Consensus 886 wPV------~gtLMIEP----TESE~k~ElDRfcdAliSIre 917 (1001)
T KOG2040|consen 886 WPV------AGTLMIEP----TESEDKAELDRFCDALISIRE 917 (1001)
T ss_pred ccc------CCceEecc----CccccHHHHHHHHHHHHHHHH
Confidence 552 34555533 223346788888777655433
No 348
>PRK07678 aminotransferase; Validated
Probab=99.21 E-value=3.6e-08 Score=101.94 Aligned_cols=321 Identities=17% Similarity=0.090 Sum_probs=166.1
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|+|.+|+...+..-. +... .+ .++. .+| + .+++.++++... -...+.||++|+.+++....
T Consensus 65 ~p~v~~ai~~q~~~~~---~~~~-~~-~~~~--~~~-l-ae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t~~ 131 (451)
T PRK07678 65 RKELAEAAYEQLKTLS---YFPL-TQ-SHEP--AIK-L-AEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYHAQ 131 (451)
T ss_pred CHHHHHHHHHHHHhcC---cccc-cc-CCHH--HHH-H-HHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 6888888877764321 1111 11 1121 122 2 356667765432 23557899999998886531
Q ss_pred --CCC-CEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCCCCC---------CC---HH
Q 012104 119 --EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSSTGY---------ID---YD 171 (471)
Q Consensus 119 --~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~~~~---------iD---~~ 171 (471)
+|| .+|+...-.|.|.-. +. ++.++. .+..++++ +... .| .+
T Consensus 132 ~g~~~r~~ii~~~~~yHG~t~-~a-------ls~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK07678 132 KGEPHRYKFISRYRAYHGNSM-GA-------LAATGQAQRKYKYEPLAPGFLHVPPP---DCYRMPGIESEDIYDLECVK 200 (451)
T ss_pred cCCCCCcEEEEECCCcCCccH-HH-------hhcCCCcccccccCCCCCCCEEeCCC---ccccccccCChHHHHHHHHH
Confidence 133 678888766644321 11 111111 01111111 1111 11 23
Q ss_pred HHHHHhhh---CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEE
Q 012104 172 KLEEKALD---FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVT 239 (471)
Q Consensus 172 ~le~~~~~---~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~ 239 (471)
.+++.+.. .++..|++. ....|...+ +++++++|+++|+++|+|+++. |+--.|.. . .-+. ..|+++
T Consensus 201 ~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~gv~PDivt 279 (451)
T PRK07678 201 EIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVIC-GFGRTGKAFGFMNYGVKPDIIT 279 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-cCCcCchhHHHHhcCCCCCEEE
Confidence 35666642 234455554 223444433 6789999999999999999985 54222211 0 0122 468887
Q ss_pred eCCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------CCCCCCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 240 TTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 240 ~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~~~~~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
+ .|.|.|. ..|.+++++ ++.+.+... ...+++++... ..++..++++.+.++
T Consensus 280 ~--gK~lggG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~h~~T~~gnp~-~~aaa~a~l~~l~~~-- 339 (451)
T PRK07678 280 M--AKGITSAYLPLSATAVKK---------------EIYEAFKGKGEYEHFRHVNTFGGNPA-ACALALKNLEIMENE-- 339 (451)
T ss_pred e--ecccccCCcceeEEEEcH---------------HHHHHHhccCcccccccCCCCCcCHH-HHHHHHHHHHHHHhC--
Confidence 6 5998653 456666766 344433321 11122333333 333333456655432
Q ss_pred HHHHHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----CC---HHHHHHHHhhcCeEeccCCcCCC
Q 012104 312 KAYAKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----LT---GNKVEKLCDLCNITVNKNAVFGD 379 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~~---~~~~~~~L~~~gI~v~~~~~p~~ 379 (471)
...+++.+..++|.+.|++. .+.++. .+. ..++-+.+.... .+ ...+...|.+.||.+.+.. |.
T Consensus 340 -~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-~~- 415 (451)
T PRK07678 340 -NLIERSAQLGELLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNG-DT- 415 (451)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEee-ceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecC-cc-
Confidence 34556666667777766432 122211 122 223334442110 11 2346677888999986421 10
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+...+.+||+.+... +++|++++.+.+.+++..
T Consensus 416 -v~~~~~~lrl~Ppl~i----t~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 416 -VAGYNNVLTLSPPLVI----SSEEIAFIVGTLKTALER 449 (451)
T ss_pred -ccCCCCEEEEECCCcC----CHHHHHHHHHHHHHHHHh
Confidence 0112367999876543 489999999999998864
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.21 E-value=2.2e-08 Score=103.53 Aligned_cols=319 Identities=16% Similarity=0.124 Sum_probs=167.7
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+++...+.. +. +...++. ++...+ ..++++++++...+ ....++||++|+.+++... ....
T Consensus 89 ~p~v~~Ai~~ql~~-~~--~~~~~~~--~~~~~~----lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tgr 156 (459)
T PRK06082 89 HPHVIEKVKEQMAK-LP--FSPRRFT--NETAIE----CAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITGN 156 (459)
T ss_pred CHHHHHHHHHHHHh-CC--CccCccC--CHHHHH----HHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcCC
Confidence 68999998877753 22 1112221 222222 23567777753221 2456789999999888643 2334
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCC--CCCCC------HHHHHHHhhhC-
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSS--TGYID------YDKLEEKALDF- 180 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~--~~~iD------~~~le~~~~~~- 180 (471)
.+|+...-.|.|.- .+. ++..+. .+..++.+.... -...| ++.+++.+...
T Consensus 157 ~~ii~~~~~yHG~t-~~a-------~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 157 FKVVSLWDSFHGAS-LDA-------ISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CEEEEEeCCCcCcc-HHH-------HhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 78888876554431 111 111111 011111110000 00011 35577777532
Q ss_pred CCcEEEEc--CCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCCCC--C
Q 012104 181 RPKLIICG--GSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLRGP--R 250 (471)
Q Consensus 181 ~pklIi~~--~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~Gp--r 250 (471)
+...|++. .+.-+...| +++++++|+++|+++|+|+++. |+--.|.. . .-+. ..|+++ +.|.|.|. .
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence 23455544 222122334 6899999999999999999987 65222321 0 0112 468887 57998652 3
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLT 330 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~ 330 (471)
.|.++++++ +..........+++++.... .++..++++.+.++ +..+++.++.++|.+.|+
T Consensus 306 ~~av~~~~~---------------i~~~~~~~~~~~T~~gnpl~-~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~ 366 (459)
T PRK06082 306 IAAMITKDK---------------YNTAAQISLGHYTHEKSPLG-CAAALATIEVIEQE---GLLEKVKADSQFMRERLL 366 (459)
T ss_pred ceEEEEcHH---------------HHhhccCCCCCCCCCcCHHH-HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHH
Confidence 566666653 33222211111223332222 33333345554332 456677777778888776
Q ss_pred cC--CceEee--CCCCCeeEEEEccCCC----CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcC
Q 012104 331 GK--GYSLVT--GGTENHLVLWDLRPLG----LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRG 399 (471)
Q Consensus 331 ~~--g~~i~~--~~~~~~~~~v~~~~~~----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g 399 (471)
+. .+.++. .+.+ .++-+++.... .+ ...+...+.+.||.+.+. ..+.+|+..+..
T Consensus 367 ~l~~~~~~i~~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---------~~~~i~~~Ppl~---- 432 (459)
T PRK06082 367 EMKAKYPLIGDVRGIG-LLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS---------QGNVIQLSPPLI---- 432 (459)
T ss_pred HHHhhCCCeeeeeecc-ceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec---------CCCEEEEeCCCc----
Confidence 53 222221 1222 23344543111 11 234556667899988542 136799986543
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 012104 400 LLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 400 ~~~~d~~~l~~~i~~~l~~ 418 (471)
++++|++++.+.+++++..
T Consensus 433 it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 433 ITREELTQALAILEEAIAK 451 (459)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 3489999999999998865
No 350
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.20 E-value=6e-08 Score=100.12 Aligned_cols=322 Identities=12% Similarity=0.059 Sum_probs=164.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCC
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEP 120 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~p 120 (471)
-.|.|.+++...+..... ....++. ++ ...++ .+++.+++.-....+.+.+.++||++|+.+++... ...
T Consensus 56 ~~p~i~~ai~~q~~~~~~---~~~~~~~-~~---~~~~l-ae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tg 127 (442)
T TIGR00709 56 NHPNMKQKILDYLQSGLP---LHTLDLT-TP---LKDAF-IEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTG 127 (442)
T ss_pred CCHHHHHHHHHHHHhccC---ccccccC-cH---HHHHH-HHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcC
Confidence 378999998877654210 0001111 11 11223 35667776422100112333479999999988743 233
Q ss_pred CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCCCCCC--------CHH----HHHHH
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSSTGYI--------DYD----KLEEK 176 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~~~~i--------D~~----~le~~ 176 (471)
..+|+...-.|.|.-. +. +..++. .+..++++ ..... +.+ .+++.
T Consensus 128 r~~Ii~~~~~yHG~t~-~~-------~s~t~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (442)
T TIGR00709 128 RTNVISFSGGFHGMTI-GA-------LAVTGNLFAKNAVGMLMPGVQFMPYP---HEYRCPFGIGGEAGSNASIEYFENF 196 (442)
T ss_pred CCeEEEEcCCcCCchH-HH-------HhhcCChhhhccCCCCCCCcEEeCCC---ccccccccCCchhHHHHHHHHHHHH
Confidence 4678888866644321 11 111110 01111221 11111 111 23333
Q ss_pred hhh-----CCCcEEEEc--CCCCCcc-cc---HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-CccEEEeCC
Q 012104 177 ALD-----FRPKLIICG--GSAYPRD-WD---YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YCHIVTTTT 242 (471)
Q Consensus 177 ~~~-----~~pklIi~~--~s~~g~~-~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~aDiv~~s~ 242 (471)
+.. .+...|++. .++.|.. .| +++++++|+++|+++|.|+++. |+-..|.... -+. ..|+++ +
T Consensus 197 ~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~--~ 273 (442)
T TIGR00709 197 IEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA-GFGRSGTMFAFEHAGIEPDFVV--M 273 (442)
T ss_pred HHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCCchhHHHHcCCCCcEEE--E
Confidence 321 234444443 2333333 22 5788999999999999999987 6643343211 112 468888 5
Q ss_pred CCcCC-CCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Q 012104 243 HKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKAN 321 (471)
Q Consensus 243 ~K~l~-GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~n 321 (471)
.|.|. |.+.|+++++++ + +.+......+++++ +....++..++++.+.++ ...+++.++
T Consensus 274 gK~l~~G~Pigav~~~~~---------------~-~~~~~~~~~~T~~g-npla~aaa~a~L~~i~~~---~l~~~~~~~ 333 (442)
T TIGR00709 274 SKAVGGGLPLAVLLIAPE---------------F-DAWQPAGHTGTFRG-NQLAMVTGTEALNYWKDD---NLAQNAQER 333 (442)
T ss_pred cccccCCcccEEEEEchH---------------H-hccCCCcCCCCCCc-CHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 69974 456678887763 1 11211111222333 333333333456554433 344566666
Q ss_pred HHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC--------C--C---HHHHHHHHhhcCeEeccCCcCCCCCCCC
Q 012104 322 AVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG--------L--T---GNKVEKLCDLCNITVNKNAVFGDSSALA 384 (471)
Q Consensus 322 a~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~--------~--~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~ 384 (471)
.++|.+.|++. .+.++. .+. ..++-+.+.... . + ...+...|.+.||.+.+.. ..
T Consensus 334 g~~l~~~L~~l~~~~~~v~~vrG~-Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------~~ 405 (442)
T TIGR00709 334 GERITSFLDDMIKEHPCIGNVRGR-GLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG-------RE 405 (442)
T ss_pred HHHHHHHHHHHHHhCCCeeeeecc-ceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC-------CC
Confidence 67777777643 222221 122 223344443210 0 1 2345667778999986421 11
Q ss_pred CCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 385 PGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 385 ~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.+|+..+.. ++++|++++.+.+.+++..
T Consensus 406 ~~~l~~~Ppl~----it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 406 GEVFRLLCPIT----IDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 36799976543 4589999999999998864
No 351
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.20 E-value=3.1e-11 Score=117.12 Aligned_cols=244 Identities=16% Similarity=0.228 Sum_probs=54.5
Q ss_pred CCCcHHHHHHHhhhhhccCC------CCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHH
Q 012104 41 NFTSFAVIEALGSALTNKYS------EGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAY 114 (471)
Q Consensus 41 n~~s~~v~~a~~~~l~~~~~------~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~ 114 (471)
..+|+++++++.....++.. .|-.|.|| +.++ +.+++++|++.+ +..++.+.|+++++
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~-------~~v~----~ll~~ltgAeaA-----~VvNnnaAAv~L~l 79 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRY-------AHVE----ELLCELTGAEAA-----LVVNNNAAAVLLAL 79 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc-------cccc----cccccccccccc-----cccccccccccccc
Confidence 34678888887665543221 34455553 2344 457789999863 33566777888888
Q ss_pred HHhcCCCCEEEEeC---CCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEE-EcCC
Q 012104 115 TAVLEPHDRIMGLD---LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLII-CGGS 190 (471)
Q Consensus 115 ~all~pGD~Vl~~~---~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi-~~~s 190 (471)
.++. +|.+|++.. .+.||.+- .+ ..+..+|. +.+.++.. ..-.+++.++.+.+ ++.+|+ +..|
T Consensus 80 ~~la-~~~EvIvsRGelVeiGgsFR----ip--~vm~~sGa--~lvEVGtt---N~t~~~Dye~AI~e-~Ta~ll~Vh~S 146 (367)
T PF03841_consen 80 NTLA-KGKEVIVSRGELVEIGGSFR----IP--DVMRQSGA--RLVEVGTT---NRTHLSDYEKAITE-NTAALLKVHTS 146 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccc-cccccccccccccccccccc----cc--cccccccc--cccccccc---cccccccccccccc-ccccccccccc
Confidence 8875 466666653 22344321 00 01223443 34444432 23345666777864 677665 4434
Q ss_pred CC---C--ccccHHHHHHHHHHhCCEEEEeccccchhhcc----ccC--CC---CCC-CccEEEeCCCCcCCCCCeEEEE
Q 012104 191 AY---P--RDWDYARFRAVADKCGALLLCDMAHISGLVAA----QEA--AN---PFE-YCHIVTTTTHKSLRGPRAGMIF 255 (471)
Q Consensus 191 ~~---g--~~~d~~~i~~ia~~~g~~livD~a~~~glv~~----g~~--~~---p~~-~aDiv~~s~~K~l~GprgG~i~ 255 (471)
+| | ...+++++.++|+++|+++++|.+. |.... |.. |+ -+. ++|+|+||..|.|.||+.|+|+
T Consensus 147 n~~i~GFt~~~~~~el~~la~~~~lp~i~Dlgs--G~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~ 224 (367)
T PF03841_consen 147 NFRIQGFTGEVSLEELAELAKEHGLPVIVDLGS--GLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIV 224 (367)
T ss_dssp --------------HHHHHHHHHT--EEEE-TT--HHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEE
T ss_pred ccccccccccccHHHHHHHHhhcCCcEEEECCC--CCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEE
Confidence 44 2 3468899999999999999999965 33221 221 22 133 7999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHHhccHH-----------HHHHHHHHHHHHH
Q 012104 256 YRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPA-----------FKAYAKQVKANAV 323 (471)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~~~~~~-----------~~~~~~~~~~na~ 323 (471)
+++ ++.+++++.. ...+ -..-..++++..+|+....++ +..-.+.+.+.++
T Consensus 225 Gkk---------------~lI~~lk~~pl~Ral--rvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~ 287 (367)
T PF03841_consen 225 GKK---------------ELIEKLKKHPLGRAL--RVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAE 287 (367)
T ss_dssp EEH---------------HHHHHHHHHHHTTT---B--HHHHHHHHHHHHH-----------------------------
T ss_pred eCH---------------HHHHHHhhCCCcceE--eeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccc
Confidence 998 6777665421 1111 123456788887887765321 1122334445566
Q ss_pred HHHHHHHcC
Q 012104 324 ALGNYLTGK 332 (471)
Q Consensus 324 ~l~~~L~~~ 332 (471)
.|...|...
T Consensus 288 ~l~~~l~~~ 296 (367)
T PF03841_consen 288 RLAAQLKAA 296 (367)
T ss_dssp ---------
T ss_pred ccccccccc
Confidence 666666543
No 352
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.19 E-value=3.2e-09 Score=102.08 Aligned_cols=340 Identities=13% Similarity=0.116 Sum_probs=196.6
Q ss_pred CeeEecCCCCCcHHHHHHHhhhhhccCCCCC----CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHH
Q 012104 33 GIELIASENFTSFAVIEALGSALTNKYSEGM----PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSP 108 (471)
Q Consensus 33 ~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~----~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~ 108 (471)
..++.+++..++++|++.....+.+....|+ .++| +.++...++ .+++.++++++.+.++ .+.+...++|.
T Consensus 6 ~~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHR---sk~~~~v~~-~a~~~lreLl~iPd~Y-~VlflqGGat~ 80 (365)
T COG1932 6 VYNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHR---SKEFKNVLE-EAEKDLRELLNIPDDY-KVLFLQGGATG 80 (365)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccc---cHHHHHHHH-HHHHHHHHHhCCCCCc-eEEEEcCccHH
Confidence 4577888888999999988877766554443 2334 334444444 4678899999998764 35555667778
Q ss_pred HHHHHHHHhcCCCCE--EEEeCCCCCCcccccccccCCccceeccceeEEEeeee--cCCCCCCCHHHHHHHhhhCCCc-
Q 012104 109 ANFAAYTAVLEPHDR--IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV--NSSTGYIDYDKLEEKALDFRPK- 183 (471)
Q Consensus 109 A~~~~~~all~pGD~--Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v--~~~~~~iD~~~le~~~~~~~pk- 183 (471)
+..++...|+.++.+ |.... ++.-.. +.+...+.......... ..-....|++... +. .+-.
T Consensus 81 qf~~~p~nLl~~~~~~yv~~g~------Ws~~a~----~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~-~~~ay 147 (365)
T COG1932 81 QFAMAPMNLLGKRGTDYVDTGA------WSEFAI----KEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FS-DNDAY 147 (365)
T ss_pred HHHHHHHhhhcccCceeEeeee------hhHhHH----HHHHHhcccccccccceeccCccCCCChhhcc--cC-CCccE
Confidence 888888999866643 44322 211100 01111111011111000 0012334444332 11 1222
Q ss_pred EEEEc-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEEeeCCCC
Q 012104 184 LIICG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIFYRKGPK 261 (471)
Q Consensus 184 lIi~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~~~~~~~ 261 (471)
+.+|. .+.+|..++ ....+... .++++|++.. +. ..+.++...|+++++.+|.+ ||.| ++++.++.+.
T Consensus 148 v~~~~NeTi~Gv~v~--~~p~~~~~--~~~v~D~SS~--il---sr~iDvsk~dviyagaQKnl-GpaGltvvIvr~~~l 217 (365)
T COG1932 148 VHFCWNETISGVEVP--ELPDIGSD--GLLVADASSA--IL---SRPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPDLL 217 (365)
T ss_pred EEEecCCcccceEcc--CCCCCCCC--ceEEEecccH--Hh---cCCCChhHcceEEEehhhcc-CccceEEEEEcHHHH
Confidence 44454 445676554 22222222 8999999754 22 13444557799999999998 7777 7777776432
Q ss_pred CCCCC--CCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcCCceEe-
Q 012104 262 PPKKG--QPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGKGYSLV- 337 (471)
Q Consensus 262 ~~~~~--~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~g~~i~- 337 (471)
..... -+.+. ++.. .+....+..+|.+..+.-....|+.+... +.+...++..++++.|.+.+.+.+|-..
T Consensus 218 ~r~~~~~~P~if--~y~~---~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~ 292 (365)
T COG1932 218 ERAESYTLPSIF--DYLT---HADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNL 292 (365)
T ss_pred hcccccCCchHh--hchh---hhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 21110 11111 1111 11122345678888777777778777644 5688899999999999999998765321
Q ss_pred -eCCC-CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHH
Q 012104 338 -TGGT-ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRA 415 (471)
Q Consensus 338 -~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~ 415 (471)
.... ...-+.+++.+..++ ..+...++++|...-++. ...+++|++. ++. +..++++.|.++++..
T Consensus 293 v~~~~RS~mnV~f~~~~~~ld-~~fv~eae~~gl~~lkGh-------r~vgGmRasi--ynA--~~~e~veaL~~fm~~f 360 (365)
T COG1932 293 VAKANRSRMNVTFTLVDAELD-KGFVAEAEAAGLIYLKGH-------RSVGGLRASI--YNA--VPLEDVEALTDFMDWF 360 (365)
T ss_pred cchhhccceeEEEEcCcHHHH-HHHHHHHHHcCCceeccc-------cCCCceeeee--ecC--CCHHHHHHHHHHHHHH
Confidence 1111 122345566544443 345666677787776652 1246799998 333 4579999999999876
Q ss_pred HH
Q 012104 416 VT 417 (471)
Q Consensus 416 l~ 417 (471)
.+
T Consensus 361 ~~ 362 (365)
T COG1932 361 EE 362 (365)
T ss_pred HH
Confidence 54
No 353
>PRK05965 hypothetical protein; Provisional
Probab=99.17 E-value=2.6e-08 Score=103.13 Aligned_cols=328 Identities=13% Similarity=0.050 Sum_probs=166.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|+|.+|+.+.+.+-. +....+....+ ...++ .+++.+++..+.+ -...+.|||+|+.+++....
T Consensus 64 ~p~i~~Ai~~q~~~~~---~~~~~~~~~~~---~~~~l-ae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~~ 133 (459)
T PRK05965 64 QESIVEAAAEQMRELP---YATGYFHFGSE---PAIRL-AAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYWNA 133 (459)
T ss_pred CHHHHHHHHHHHHhcC---CcccccccCCH---HHHHH-HHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHHHh
Confidence 6899999888775421 10101100111 11223 3556666632221 23556899999998886431
Q ss_pred -C-C-CCEEEEeCCCCCCcccccccccCCcccee--cc---ceeEEEeeeecC-CCCCCC--------HHHHHHHhhhCC
Q 012104 119 -E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISA--TS---IYFESLPYKVNS-STGYID--------YDKLEEKALDFR 181 (471)
Q Consensus 119 -~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~--~g---~~~~~~~~~v~~-~~~~iD--------~~~le~~~~~~~ 181 (471)
. + ..+|+...-.|.|.-. +.....+..... .+ .....++++... ....-| ++.+++.+....
T Consensus 134 ~g~~~r~kii~~~~~YHG~t~-~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 212 (459)
T PRK05965 134 TGRPSKKQFISLERGYHGSSS-VGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG 212 (459)
T ss_pred cCCCCccEEEEecCCcCcccH-HHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC
Confidence 1 2 3678988866644311 000000000000 00 001112111100 000123 256777776432
Q ss_pred ---CcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC
Q 012104 182 ---PKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP 249 (471)
Q Consensus 182 ---pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp 249 (471)
...|++. ....|...+ +++++++|+++|+++|+|+.+. |+--.|..- .-+. ..|+++.+ |.|.|.
T Consensus 213 ~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG 289 (459)
T PRK05965 213 ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT-GFGRTGPLFACEAEGVVPDLMTVA--KGLTSG 289 (459)
T ss_pred CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-cCccCchhhhHhhcCCCCCeEEec--hhhccC
Confidence 3445543 222333322 5788999999999999999986 652222210 0111 46898875 998654
Q ss_pred --CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------C-CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHH
Q 012104 250 --RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------V-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKA 320 (471)
Q Consensus 250 --rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~ 320 (471)
..|.+++++ ++.+.+... . ..+++++ +....++...+++.+.++ +..+++.+
T Consensus 290 ~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~l~~~---~l~~~~~~ 350 (459)
T PRK05965 290 YVPMGAVLMSD---------------HVYQGIADGAGAAAPVGHGYTYSA-HPVSAAVGLEVLRLYHEG---GLLANGQK 350 (459)
T ss_pred CcceeEEEEcH---------------HHHHHHhccccccccccccCCCCC-CHHHHHHHHHHHHHHHhc---cHHHHHHH
Confidence 456777776 344333211 1 1122222 223333333345554332 35566667
Q ss_pred HHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCCCCCCCCCCe
Q 012104 321 NAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFGDSSALAPGG 387 (471)
Q Consensus 321 na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~ 387 (471)
..++|.+.|++. .+.++. .+. ..++-+.+.... .+ ...+...+.+.||.+.+. ..+.
T Consensus 351 ~g~~l~~~l~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~---------g~~~ 420 (459)
T PRK05965 351 AGPRFAAGLDALRAHPLVGDVRGR-GLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAF---------GDGV 420 (459)
T ss_pred HHHHHHHHHHhhccCCCEEEEeec-ceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------CCcE
Confidence 777777777654 222221 112 223344442110 01 234667778899998641 1356
Q ss_pred eEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 388 VRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 388 iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
||+..|-. ++++|++++.+.+.+++..
T Consensus 421 i~~~PpL~----it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 421 LGFAPALC----CTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred EEEECCCc----CCHHHHHHHHHHHHHHHHH
Confidence 99976543 3589999999999999875
No 354
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.16 E-value=4.6e-08 Score=101.12 Aligned_cols=329 Identities=14% Similarity=0.093 Sum_probs=167.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+|+...+.+-. +....++. .+ ...+++ +++.+++....+ -.....||++|+.+++... ....
T Consensus 71 ~p~i~~Ai~~ql~~~~---~~~~~~~~-~~---~~~~la-e~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tgr 139 (457)
T PRK05639 71 HPKLVKAVQEQVALIQ---HSMIGYTH-SE---RAIRVA-EKLAEISPIENP---KVLFGLSGSDAVDMAIKVSKFSTRR 139 (457)
T ss_pred CHHHHHHHHHHHHhcc---ccccCccC-CH---HHHHHH-HHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHhcCC
Confidence 6899998887775421 11111111 11 112232 456666653322 2355789999999888754 2344
Q ss_pred CEEEEeCCCCCCcccccccccCCcccee-cc-----ceeEEEeeeecCC-----CCCCCHH--------HHHHHhhh---
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISA-TS-----IYFESLPYKVNSS-----TGYIDYD--------KLEEKALD--- 179 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~g-----~~~~~~~~~v~~~-----~~~iD~~--------~le~~~~~--- 179 (471)
.+|+...-.|.|.-. +.....+..... .+ ..+..++++-... +..-|.+ .+++.+..
T Consensus 140 ~~ii~~~~~yHG~t~-~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 218 (457)
T PRK05639 140 PWILAFIGAYHGQTL-GATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV 218 (457)
T ss_pred CeEEEECCCcCCccH-HHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence 678888765544210 100000000000 00 0112222221000 0001222 34444321
Q ss_pred --CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcCCC
Q 012104 180 --FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSLRG 248 (471)
Q Consensus 180 --~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l~G 248 (471)
.+...|++. ....|...+ +++++++|+++|+++|+|++|. |+--.|.. . .-+. ..|+++ +.|.|.|
T Consensus 219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~--~gK~l~g 295 (457)
T PRK05639 219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII--FGKGVAS 295 (457)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--echhhcC
Confidence 234455544 222233222 5789999999999999999997 75223321 0 1112 468888 5799864
Q ss_pred -CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 012104 249 -PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGN 327 (471)
Q Consensus 249 -prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~ 327 (471)
-..|.++++++ +.+......+ ++.++... ..++..++++.+.+ ....++...+.++|.+
T Consensus 296 G~pi~av~~~~~---------------i~~~~~~~~~-~T~~g~p~-~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~ 355 (457)
T PRK05639 296 GMGLSGVIGRKE---------------LMDLTSGSAL-LTPAANPV-ISAAAEATLEIIEE---ENLLKNALKVGEFIKK 355 (457)
T ss_pred CCcceeEEehHH---------------HHhhcCCCcc-cCCCcCHH-HHHHHHHHHHHHHH---ccHHHHHHHHHHHHHH
Confidence 33477777763 3332211111 22233222 33333345655533 2455666667788888
Q ss_pred HHHcC--CceEee--CCCCCeeEEEEccCC-CC-C---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 328 YLTGK--GYSLVT--GGTENHLVLWDLRPL-GL-T---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 328 ~L~~~--g~~i~~--~~~~~~~~~v~~~~~-~~-~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
.|++. ++.++. .+. ..++-+.+... .. + ...+.+.|.++|+.+.+. + ...+.+|+..+..
T Consensus 356 ~L~~l~~~~~~~~~VrG~-Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---g----~~~~~lr~~Ppl~--- 424 (457)
T PRK05639 356 RLLEMKESFEVIGDVRGK-GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY---G----MFGNVIRITPPLV--- 424 (457)
T ss_pred HHHHHHHhCCCEEeeccc-eeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEeCCCc---
Confidence 88763 344322 122 22333444221 10 1 234667777899998642 1 1236899987654
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+++|++++.+.+.+++...
T Consensus 425 -it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 425 -ITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred -cCHHHHHHHHHHHHHHHHHH
Confidence 45899999999999998753
No 355
>PRK07480 putative aminotransferase; Validated
Probab=99.16 E-value=6.6e-08 Score=99.96 Aligned_cols=321 Identities=14% Similarity=0.078 Sum_probs=161.9
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.|.+++...+..- ........+ .++ ...++ .+++.+++....+ -...+.||++|+.+++....
T Consensus 68 ~p~v~~Ai~~q~~~~-~~~~~~~~~--~~~---~~~~l-ae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~~ 137 (456)
T PRK07480 68 RKELADAAARQMREL-PYYNTFFKT--THP---PAIEL-AAKLAEVAPPGFN---HVFFTNSGSEANDTVLRMVRHYWAL 137 (456)
T ss_pred CHHHHHHHHHHHHhc-CCccccccc--CCH---HHHHH-HHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 688998887776532 100000001 111 22223 3566677643221 23557899999998886431
Q ss_pred -C-C-CCEEEEeCCCCCCcccccccccCCccceeccce------------eEEEeeee--c-CCCC-CCC-----HHHHH
Q 012104 119 -E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY------------FESLPYKV--N-SSTG-YID-----YDKLE 174 (471)
Q Consensus 119 -~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~------------~~~~~~~v--~-~~~~-~iD-----~~~le 174 (471)
. + ..+|+...-.|.|... + .++..+.. +..++++. . +.+. ..+ .+.++
T Consensus 138 ~g~~~r~~ii~~~~~yHG~tl-~-------a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 209 (456)
T PRK07480 138 KGKPQKKVIISRKNGYHGSTV-A-------GASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLE 209 (456)
T ss_pred cCCCCCcEEEEECCCcCCcch-h-------hhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHH
Confidence 1 3 3578888765544311 1 11111110 11111110 0 0000 001 25666
Q ss_pred HHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC-C-CCC-CccEEEeCC
Q 012104 175 EKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA-N-PFE-YCHIVTTTT 242 (471)
Q Consensus 175 ~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~-~-p~~-~aDiv~~s~ 242 (471)
+.+... +...|++. ....|...+ +++++++|+++|+++|+|+++. |+--.|..- . -+. ..|++++
T Consensus 210 ~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~-- 286 (456)
T PRK07480 210 AKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVIC-GFGRTGEWFGSQHFGIKPDLMTI-- 286 (456)
T ss_pred HHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCcchhhhhhcCCCCCeeee--
Confidence 555332 23455544 233454444 6899999999999999999986 652222210 0 111 3688765
Q ss_pred CCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhh--hcC--CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHH
Q 012104 243 HKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKIN--FAV--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (471)
Q Consensus 243 ~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~--~~~--~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~ 316 (471)
.|.|.|. ..|.+++++ ++.+.+. ... ..+++++ +....++...+++.+.++ ...+
T Consensus 287 gK~l~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~T~~g-npl~~Aaa~a~L~~l~~~---~l~~ 347 (456)
T PRK07480 287 AKGLTSGYIPMGAVGVGD---------------RVAEVLIEEGGEFNHGFTYSG-HPVAAAVALANLRILRDE---GIVE 347 (456)
T ss_pred ehhhccCCccceEEEEcH---------------HHHHHHhcCCCCcccCCCCCc-CHHHHHHHHHHHHHHHhC---CHHH
Confidence 5998762 345555665 3444341 111 1223333 233334444456655432 3444
Q ss_pred HH-HHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-----C-C----HHHHHHHHhhcCeEeccCCcCCCCCC
Q 012104 317 QV-KANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-----L-T----GNKVEKLCDLCNITVNKNAVFGDSSA 382 (471)
Q Consensus 317 ~~-~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-----~-~----~~~~~~~L~~~gI~v~~~~~p~~~~~ 382 (471)
++ .+..++|.+.|++. .+.++. .+. ..++-+.+.... . + ...+...|.+.||.+.+.
T Consensus 348 ~~~~~~g~~l~~~l~~l~~~~~i~~vrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------- 418 (456)
T PRK07480 348 RVRDDTGPYLQKRLRELADHPLVGEVRGV-GLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-------- 418 (456)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeEEee-cceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec--------
Confidence 55 35556666666542 122111 112 223334442111 0 1 234566777899998531
Q ss_pred CCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 383 LAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 383 ~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+.+||..+.. ++++|++++.+.+++++...
T Consensus 419 --~~~l~~~Ppl~----it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 419 --GDRMIISPPLV----ITHAEIDELVEKARKALDAT 449 (456)
T ss_pred --CCEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 25799975433 35899999999999998753
No 356
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.16 E-value=5.7e-10 Score=108.23 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh---cCCC----------CEEEEeCCCCCCcccccccccCC
Q 012104 78 IENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV---LEPH----------DRIMGLDLPSGGHLTHGYYTSGG 144 (471)
Q Consensus 78 lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al---l~pG----------D~Vl~~~~~~~g~~s~~~~~~~g 144 (471)
.|........++.|.+..- ..+...+|+.+|.-++.+- .-|+ +-|+-.+ ..+|+|--
T Consensus 142 mE~~vl~km~~ivGw~~~~--DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtS--eesHYSi~------ 211 (510)
T KOG0629|consen 142 MEEEVLAKMREIVGWEEGG--DGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTS--EESHYSIK------ 211 (510)
T ss_pred ehHHHHHHHHHHhCCCCCC--CceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEec--ccchhhHH------
Confidence 3555566777888887642 3567778888877666543 1122 3344333 23454421
Q ss_pred ccceeccce-eEEEeeeecCCCCCCCHHHHHHHhhhCC-----CcEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 145 KKISATSIY-FESLPYKVNSSTGYIDYDKLEEKALDFR-----PKLIICG--GSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 145 ~~~~~~g~~-~~~~~~~v~~~~~~iD~~~le~~~~~~~-----pklIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
+...+.|.+ ..++.++.+ +.|.+++++||+++.+.+ |-+|-++ .+.+|..-|++.+++||++|+.|++||+
T Consensus 212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence 112234433 234455556 678999999999986543 4444443 5678999999999999999999999999
Q ss_pred cccchhhccccCC---CCCCCccEEEeCCCCcCCCC-CeEEEEeeCCC-----CCC-----CCCCCCCcccchHhhhhhc
Q 012104 217 AHISGLVAAQEAA---NPFEYCHIVTTTTHKSLRGP-RAGMIFYRKGP-----KPP-----KKGQPEGAVYDFEDKINFA 282 (471)
Q Consensus 217 a~~~glv~~g~~~---~p~~~aDiv~~s~~K~l~Gp-rgG~i~~~~~~-----~~~-----~~~~~~i~~~~l~~~i~~~ 282 (471)
|..-|+.....+- +.++.+|.|+-+.||++..| +++.++++.+- .+. +...+. |+. ..+.
T Consensus 291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~---Ydv--S~DT- 364 (510)
T KOG0629|consen 291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKF---YDV--SYDT- 364 (510)
T ss_pred ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCce---eec--cccc-
Confidence 9985554432221 22347899999999998766 56777766531 000 000000 000 0000
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeC
Q 012104 283 VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTG 339 (471)
Q Consensus 283 ~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~ 339 (471)
..-..|+|-|.... -+...++.-...+|++.+++..++|++|.+.|++. |+..+-.
T Consensus 365 gdK~iQCGRh~D~F-KlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 365 GDKAIQCGRHVDVF-KLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred ccchhhcCccccHH-HHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 01123555444332 23333444445689999999999999999999988 5555443
No 357
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.15 E-value=4e-08 Score=100.61 Aligned_cols=315 Identities=16% Similarity=0.023 Sum_probs=167.6
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|+|.+++...+.+-.. .... .++ .+ ...++ .+++.++.....+ -....+|||+|+.+++....
T Consensus 58 ~p~i~~ai~~q~~~~~~-~~~~-~~~--~~---~~~~l-ae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~~ 126 (422)
T PRK05630 58 HPRLKAAAHKQIDTMSH-VMFG-GLT--HE---PAIKL-TRKLLNLTDNGLD---HVFYSDSGSVSVEVAIKMALQYSKG 126 (422)
T ss_pred CHHHHHHHHHHHHhCCC-cccC-CcC--CH---HHHHH-HHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 68888888777654211 0000 010 11 11223 2455566532211 23557899999998886432
Q ss_pred --CCC-CEEEEeCCCCCCcccccccccCCccceeccc-------------eeEEEeeeecCCCCCCC-------HHHHHH
Q 012104 119 --EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI-------------YFESLPYKVNSSTGYID-------YDKLEE 175 (471)
Q Consensus 119 --~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~-------------~~~~~~~~v~~~~~~iD-------~~~le~ 175 (471)
++| .+|+...-.|.|.- .+. ++.++. ....++++. . ...+ .+.+++
T Consensus 127 ~g~~~r~~ii~~~~~yHG~t-~~a-------ls~~~~~~~~~~~~~~~~~~~~~~p~~~--~-~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 127 QGHPERTRLLTWRSGYHGDT-FAA-------MSVCDPEGGMHSLWKGTLPEQIFAPAPP--V-RGSSPQEISEYLRSLEL 195 (422)
T ss_pred cCCCCCcEEEEECCCcCCcc-HHH-------hccCCCcccccccccccCCCCeEcCCCc--c-cCCChHHHHHHHHHHHH
Confidence 133 57888886664431 111 111110 001111110 0 0112 234444
Q ss_pred HhhhCCCcEEEEcC---CCCCcc----ccHHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCc
Q 012104 176 KALDFRPKLIICGG---SAYPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKS 245 (471)
Q Consensus 176 ~~~~~~pklIi~~~---s~~g~~----~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~ 245 (471)
.+. .+...|++.+ ...|.. -.+++++++|+++|+++|+|++|. |+--.|..- .-.. ..||++ +.|.
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDi~t--~gK~ 271 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIAT-GFGRTGELFATLAAGVTPDIMC--VGKA 271 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccee-CCCcCchhhHHHhcCCCCCeee--eech
Confidence 443 3455555442 222322 246789999999999999999995 762223210 0111 367884 5699
Q ss_pred CCC--CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------CCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHH
Q 012104 246 LRG--PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQ 317 (471)
Q Consensus 246 l~G--prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~ 317 (471)
|.| +.+|++++++ ++.+.+... ...+++++ +....++...+++.+.++ ...++
T Consensus 272 l~gG~~p~~av~~~~---------------~i~~~~~~~~~~~~~~h~~T~~g-~Pla~aaa~aaL~~l~~~---~~~~~ 332 (422)
T PRK05630 272 LTGGFMSFAATLCTD---------------KVAQLISTPNGGGALMHGPTFMA-NPLACAVAHASLEIIETG---MWRKQ 332 (422)
T ss_pred hhcCccccceeeccH---------------HHHHHHhccCCCCccccCCCCcC-CHHHHHHHHHHHHHHHhC---cHHHH
Confidence 955 5678888887 344433211 01112222 334444444567665432 33456
Q ss_pred HHHHHHHHHHHHHcC-CceEeeC-CCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCC
Q 012104 318 VKANAVALGNYLTGK-GYSLVTG-GTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAM 395 (471)
Q Consensus 318 ~~~na~~l~~~L~~~-g~~i~~~-~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~ 395 (471)
+.++.++|.+.|++. .+..+.. ..-..++-+.+... .+...+...|.++||.+.+. .+.+||..+-.
T Consensus 333 ~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~-~~~~~~~~~~~~~Gl~~~~~----------g~~l~~~PpL~ 401 (422)
T PRK05630 333 VKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQP-VDMEEATQAAVDHGVWLRPF----------GRLVYVMPPYI 401 (422)
T ss_pred HHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCc-ccHHHHHHHHHHCCeEEEec----------CCEEEEECCcc
Confidence 667777777777643 1221211 01133455566432 23556778888899998541 25789975433
Q ss_pred CCcCCCHHHHHHHHHHHHHHHHH
Q 012104 396 TSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 396 t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
++++|++++.+.+++++..
T Consensus 402 ----it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 ----TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred ----CCHHHHHHHHHHHHHHHhc
Confidence 3589999999999998864
No 358
>PRK07482 hypothetical protein; Provisional
Probab=99.13 E-value=8.1e-08 Score=99.52 Aligned_cols=322 Identities=16% Similarity=0.038 Sum_probs=165.1
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.|.+|+...+..-. ...+...+. + +...+++ +++.+++..+.+ -.....|||+|+.+++....
T Consensus 68 ~p~v~~Av~~q~~~~~-~~~~~~~~~--~---~~~~~lA-e~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~~ 137 (461)
T PRK07482 68 RTEVAEAIAEQAKELA-YYHTYVGHG--T---EASITLS-KRIIDRAPAGMS---KVYYGLSGSDANETQIKLVWYYNNV 137 (461)
T ss_pred CHHHHHHHHHHHHhcC-ccccccccC--C---HHHHHHH-HHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHHh
Confidence 6899999887765421 000000010 1 1222233 556666642221 23557899999998887542
Q ss_pred -C-C-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeee--c-CC-C------CCCCHHHH
Q 012104 119 -E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKV--N-SS-T------GYIDYDKL 173 (471)
Q Consensus 119 -~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v--~-~~-~------~~iD~~~l 173 (471)
. + ..+|+...-.|.|.- .+. .+.++. .+..++++. + +. + ..-+.+.+
T Consensus 138 ~g~~~r~~Ii~~~~~YHG~t-~ga-------~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 209 (461)
T PRK07482 138 LGRPEKKKIISRWRGYHGSG-VVT-------GSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADEL 209 (461)
T ss_pred cCCCCCceEEEecCccCCcc-Hhh-------hhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHH
Confidence 1 2 367888886664431 111 111110 011111110 0 00 0 00146778
Q ss_pred HHHhhhC---CCcEEEEc--CCCCCccc-c---HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeC
Q 012104 174 EEKALDF---RPKLIICG--GSAYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~---~pklIi~~--~s~~g~~~-d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s 241 (471)
++.+... +...|++. ....|... | +++++++|+++|+++|+|+.+. |+--.|.. . .-+. ..|+++.+
T Consensus 210 ~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g 288 (461)
T PRK07482 210 EELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVT-GFGRLGSMFGSDHYGIEPDLITVA 288 (461)
T ss_pred HHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCcchhhHHhcCCCCCEEEEc
Confidence 8877432 23455544 22223332 2 5788999999999999999986 65212211 0 0112 46899864
Q ss_pred CCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh------cC-CCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF------AV-FPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 242 ~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~------~~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
|.|.|. ..|.+++++ ++.+.+.. .. ..+++++ +....++..++++.+.++
T Consensus 289 --Kgl~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~~~~~--- 347 (461)
T PRK07482 289 --KGLTSAYAPLSGSIVGE---------------KVWDVLEQGSDEHGAIGHGWTYSG-HPICAAAALANLDILERE--- 347 (461)
T ss_pred --cccccCccccceeeecH---------------HHHHHHhcccccCCccccCCCCCc-CHHHHHHHHHHHHHHHhC---
Confidence 998652 345555655 33333321 11 1122222 333333333456655432
Q ss_pred HHHHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCC
Q 012104 313 AYAKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
+..+++.+..++|.+.|++. .+.++. .+. ..++-+.+.... .+ ...+...|.+.||.+.+. |
T Consensus 348 ~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--~- 423 (461)
T PRK07482 348 NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGV-GMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM--P- 423 (461)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeec-eeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--C-
Confidence 34556666667777777542 222221 122 223344553211 11 234667777899988531 1
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
..+.+|+..+.. ++++|++++.+.++++++.
T Consensus 424 -----~~~~i~~~Ppl~----it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 424 -----HGDILGFAPPLV----LTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred -----CCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Confidence 135799875443 3589999999999998864
No 359
>PRK07481 hypothetical protein; Provisional
Probab=99.13 E-value=7e-08 Score=99.71 Aligned_cols=328 Identities=15% Similarity=0.122 Sum_probs=163.3
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|+|.+|+...+..-.. .. .+ .+... +...++ .+++.++++-.. ..-...++||++|+.+++....
T Consensus 59 ~~p~v~~Ai~~ql~~~~~---~~-~~-~~~~~-~~~~~l-ae~L~~~~~~~~--~~~v~f~~sGsEAve~AlklAr~~~~ 129 (449)
T PRK07481 59 NREEVKEAIVRQLDELEY---YS-TF-DGTTH-PRAIEL-SYELIDMFAPEG--MRRVFFSSGGSDSVETALKLARQYWK 129 (449)
T ss_pred CCHHHHHHHHHHHHhccc---ee-cc-cccCC-HHHHHH-HHHHHHhcCCCC--CCEEEEcCchHHHHHHHHHHHHHHHH
Confidence 368898888777653210 00 00 00111 111223 356667763111 1123557899999998887432
Q ss_pred ---CCC-CEEEEeCCCCCCcccccccccCCccceecc------ceeEEEeeeecCC-CCC-CCHHHH--------HHHhh
Q 012104 119 ---EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATS------IYFESLPYKVNSS-TGY-IDYDKL--------EEKAL 178 (471)
Q Consensus 119 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g------~~~~~~~~~v~~~-~~~-iD~~~l--------e~~~~ 178 (471)
++| .+|+...-.|.|.- .+.....+... ... ..+..++++.... .+. -|++.+ |+.+.
T Consensus 130 ~~g~~~r~~ii~~~~~yHG~t-~ga~s~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~ 207 (449)
T PRK07481 130 VRGQPERTKFISLKQGYHGTH-FGGASVNGNTV-FRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIA 207 (449)
T ss_pred hcCCCCCcEEEEECCCcCCcc-hhhhccCCCcc-cccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHH
Confidence 133 67888886654421 11110000000 000 0011111110000 000 144443 44343
Q ss_pred -h--CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEEEeCCCCcC
Q 012104 179 -D--FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIVTTTTHKSL 246 (471)
Q Consensus 179 -~--~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv~~s~~K~l 246 (471)
. .++..|++. ....|...+ +++++++|+++|+++|.|+.+. |+--.|.. . .-+. ..|+++.+ |.|
T Consensus 208 ~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl 284 (449)
T PRK07481 208 FQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGI 284 (449)
T ss_pred hcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecc
Confidence 1 234455554 223344333 6899999999999999999986 65222211 0 1112 46888874 998
Q ss_pred CCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------C-CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHH
Q 012104 247 RGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------V-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQ 317 (471)
Q Consensus 247 ~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~ 317 (471)
.|. ..|.+++++ ++.+.+... . ..+++++ +....++...+++.+.++ +..++
T Consensus 285 ~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~L~~l~~~---~l~~~ 345 (449)
T PRK07481 285 TSGYVPLGATMVNA---------------RIADAFEANADFGGAIMHGYTYSG-HPVACAAALATLDIVVRE---DLPAN 345 (449)
T ss_pred cCCCcCceEEEEcH---------------HHHHHHhccCccccccccCCCCCC-CHHHHHHHHHHHHHHHhh---hHHHH
Confidence 752 356666766 344433321 1 1122222 222333333456555432 34556
Q ss_pred HHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCCCCCCC
Q 012104 318 VKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFGDSSAL 383 (471)
Q Consensus 318 ~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~~~~~ 383 (471)
+.+..++|.+.|++. .+.++. .+. ..++.+++.... .+ ...+...|.+.||.+.+.
T Consensus 346 ~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~--------- 415 (449)
T PRK07481 346 AAKRGAYLLEGLQPLKERFELVGDVRGK-GLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS--------- 415 (449)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEeec-ceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec---------
Confidence 666667777777653 233221 122 223445553210 11 234566777899998642
Q ss_pred CCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 384 APGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 384 ~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.+||..+.. ++++|++++.+.+.++++.
T Consensus 416 -g~~i~l~Ppl~----it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 416 -GTKIILSPPLV----IQREDVDRIVDALDAGLSA 445 (449)
T ss_pred -CCEEEEECCCC----CCHHHHHHHHHHHHHHHHh
Confidence 13589875433 3589999999999998865
No 360
>PRK06148 hypothetical protein; Provisional
Probab=99.12 E-value=6.7e-08 Score=108.93 Aligned_cols=320 Identities=16% Similarity=0.132 Sum_probs=167.4
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh--cCCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV--LEPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al--l~pG 121 (471)
.|.|.+|+...+..-. ...+|. .+ ...++ .+++.+++..+.+ ....++|||+|+.+++... ....
T Consensus 640 hp~v~~Ai~~q~~~l~----~~~~~~--~~---~~~~l-Ae~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARLN----TNTRYL--HD---AIVAY-AERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhcC----CcCCcC--CH---HHHHH-HHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 5888888877764321 111221 11 11222 3556666643221 2456789999999988754 2334
Q ss_pred CEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeec-CCCCC-CC-------HHHHHHHhhh-
Q 012104 122 DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVN-SSTGY-ID-------YDKLEEKALD- 179 (471)
Q Consensus 122 D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~-~~~~~-iD-------~~~le~~~~~- 179 (471)
.+|++..-.|.|.-. +. ++.++. .+..++.+-. ...+. .| .+.+++.+..
T Consensus 707 ~~ii~~~~~YHG~t~-~a-------~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 707 RDAIVLDHAYHGTTT-EL-------IDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred CeEEEEcCCccCCCc-ch-------hhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 678888765544311 11 111110 0111110000 00000 11 1345555531
Q ss_pred ----CCCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCC---CC-CccEEEeCCCCc
Q 012104 180 ----FRPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-YCHIVTTTTHKS 245 (471)
Q Consensus 180 ----~~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p---~~-~aDiv~~s~~K~ 245 (471)
.++..|++. ....|...+ +++++++|+++|+++|+|+++. |+--.|..... +. ..||++. .|.
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqt-GfGRtG~~~~a~e~~gv~PDivt~--gK~ 855 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQV-GFGRVGSHWWAFETQGVVPDIVTM--GKP 855 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEeccc-CCCCCCCcchhhhhcCCCcceeee--ccc
Confidence 234455554 333444444 6899999999999999999986 55222210001 12 4688776 599
Q ss_pred CCC-CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcC-CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Q 012104 246 LRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAV-FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAV 323 (471)
Q Consensus 246 l~G-prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~ 323 (471)
|.| -..|.+++++ ++.+.+.... +.+++++......+++ +.++.+.++ +..+++.+..+
T Consensus 856 lggG~Plgav~~~~---------------ei~~~~~~g~~~~~Tf~gnpla~aaa~-a~L~~i~~e---~l~~~~~~~G~ 916 (1013)
T PRK06148 856 IGNGHPMGAVVTTR---------------EIADSFDNGMEYFNTFGGNPVSCAIGL-AVLDIIEDE---DLQRNALEIGN 916 (1013)
T ss_pred ccCCcceEEEEEcH---------------HHHhhccCCCccccCCCCCHHHHHHHH-HHHHHHhhc---cHHHHHHHHHH
Confidence 864 3456777776 4444443321 2233343333333333 346555432 45566666677
Q ss_pred HHHHHHHcC--CceEee--CCCCCeeEEEEccCCC----CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 324 ALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG----LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 324 ~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~----~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
+|.+.|++. .+.++. .+.+ .++-+.+.... .+ ...+.+.|.++||.+.+. + + ..+.+||..
T Consensus 917 ~l~~~L~~l~~~~~~i~~VrG~G-l~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g---~-~~~vlr~~P 988 (1013)
T PRK06148 917 YLLAGLRELQDRFDIIGDVRGMG-LFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---G---P-HDNVLKIRP 988 (1013)
T ss_pred HHHHHHHHHHHhCCCceEEeeec-eEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc---C---C-CCCEEEEeC
Confidence 777777653 222211 1222 23344543211 11 234567777899999642 1 1 136899986
Q ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 393 PAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 393 ~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+.. +++++++++.+.+++++..
T Consensus 989 pl~----it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 989 PLI----FSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred Ccc----CCHHHHHHHHHHHHHHHHH
Confidence 544 3589999999999998864
No 361
>PRK06149 hypothetical protein; Provisional
Probab=99.12 E-value=6.3e-08 Score=109.03 Aligned_cols=325 Identities=13% Similarity=0.029 Sum_probs=165.6
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHH---HhcCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYT---AVLEP 120 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~---all~p 120 (471)
.|.|.+++...+..-. ...+++ .+.. .++ .+++++++.-..+ ....++||++||.+++. +..+
T Consensus 601 hp~v~~Ai~~q~~~l~----~~~~~~--~~~~---~el-ae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg- 666 (972)
T PRK06149 601 HPRLAAAAARQWSLLN----TNSRFH--YAAV---AEF-SERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG- 666 (972)
T ss_pred CHHHHHHHHHHHHhcc----cccccc--CHHH---HHH-HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC-
Confidence 6899988877664321 112332 1222 222 2556677632111 24557899999999987 3333
Q ss_pred CCEEEEeCCCCCCcccccccccCCcc---ceecc---ceeEEEeeeecCCC--C-CCC-----HHHHHHHhhh-----CC
Q 012104 121 HDRIMGLDLPSGGHLTHGYYTSGGKK---ISATS---IYFESLPYKVNSST--G-YID-----YDKLEEKALD-----FR 181 (471)
Q Consensus 121 GD~Vl~~~~~~~g~~s~~~~~~~g~~---~~~~g---~~~~~~~~~v~~~~--~-~iD-----~~~le~~~~~-----~~ 181 (471)
...|+..+-.|.|.- .+.....+.. ....+ .++..++++ +... + ..| .+++++.++. .+
T Consensus 667 r~~ii~~~~~yHG~t-~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 744 (972)
T PRK06149 667 RRDVVSVLEAYHGWT-VATDAVSTSIADNPQALETRPDWVHPVESP-NTYRGRFRGADSAADYVRDVVAQLEELDASGRG 744 (972)
T ss_pred CCeEEEEeCCCCCcC-hhHhhhcCCccccccccCCCCCCeEEeCCC-cccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence 456777765553321 0100000000 00000 001111111 0000 0 112 2444444321 23
Q ss_pred CcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCC---CC-CccEEEeCCCCcCCCC-C
Q 012104 182 PKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANP---FE-YCHIVTTTTHKSLRGP-R 250 (471)
Q Consensus 182 pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p---~~-~aDiv~~s~~K~l~Gp-r 250 (471)
+..|++. .+..|...+ +++++++|+++|+++|+|++|. |+--.|..... +. ..||+++ .|.|.|. .
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~t-GfGRtG~~~~a~e~~gv~PDivt~--gK~lg~G~P 821 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQV-GYGRLGHYFWGFEQQGVVPDIITM--AKGMGNGHP 821 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehh-cCCccCccchhhhhcCCCCCEEEe--cccccCCee
Confidence 4456654 344565666 7899999999999999999995 54222321101 11 3688854 6998642 3
Q ss_pred eEEEEeeCCCCCCCCCCCCCcccchHhhhhh-cCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 012104 251 AGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-AVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYL 329 (471)
Q Consensus 251 gG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~-~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L 329 (471)
.|++++++ ++.+.+.. ..+..++++......+++ ++++.+.++ +..+++.+.-++|.+.|
T Consensus 822 l~av~~~~---------------~i~~~~~~~~~~~sT~~gnP~~~aaal-a~L~~i~~e---~l~~~~~~~G~~l~~~L 882 (972)
T PRK06149 822 LGAVITRR---------------EIAEALEAEGYFFSSTGGSPVSCRIGM-AVLDVLREE---KLQENARRVGDHLKARL 882 (972)
T ss_pred eEEEEEcH---------------HHHhhhccCCcccCCCCCCHHHHHHHH-HHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 57777776 34444432 112222333333333333 356555432 34555556667777777
Q ss_pred HcC--CceEee--CCCCCeeEEEEccCC----CCC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCc
Q 012104 330 TGK--GYSLVT--GGTENHLVLWDLRPL----GLT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSR 398 (471)
Q Consensus 330 ~~~--g~~i~~--~~~~~~~~~v~~~~~----~~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~ 398 (471)
++. .+.++. .|.+ .++-+++... ..+ ...+.+.|.++||.+.+. + ...+.+||..+-.
T Consensus 883 ~~l~~~~~~i~~vrG~G-l~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~---g----~~~~vl~~~Ppl~--- 951 (972)
T PRK06149 883 EALADRHPLIGAVHGMG-LYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT---G----DHLNILKIKPPLC--- 951 (972)
T ss_pred HHHHHhCCCeEEEeecc-eEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec---C----CCCCEEEEECCCc---
Confidence 653 122221 1222 2333444211 011 234677778899998652 1 1136799975433
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 012104 399 GLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 399 g~~~~d~~~l~~~i~~~l~~ 418 (471)
+++++++++.+.+.+++..
T Consensus 952 -it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 952 -LDRESADFFVDMLDRVLTE 970 (972)
T ss_pred -CCHHHHHHHHHHHHHHHHh
Confidence 3589999999999998864
No 362
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.11 E-value=2.4e-08 Score=97.60 Aligned_cols=291 Identities=17% Similarity=0.109 Sum_probs=170.0
Q ss_pred HHHHHHHhcCCCCCCCceeeecC-ChHHHHHHHHHHh-c--CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEE
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPY-SGSPANFAAYTAV-L--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESL 157 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~-sGt~A~~~~~~al-l--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~ 157 (471)
.+..+++|.|.+- +|-... .+|.+-.++.++. + ++..++++..-.|+-+++.- +-...+.+++++
T Consensus 125 fQtlv~dLTGm~V----ANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl-------~Tra~~~g~~i~ 193 (450)
T COG0403 125 FQTLVADLTGLDV----ANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVL-------RTRAEGLGIEIE 193 (450)
T ss_pred HHHHHHHHhCCCc----ccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHH-------HhhcccCceEEE
Confidence 4577889999986 333222 3555666666665 2 23689999988777665311 112344445555
Q ss_pred eeeecCCCCCCCHHHHHHHhhhCCCcEEEEc-CCCCC-ccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-C
Q 012104 158 PYKVNSSTGYIDYDKLEEKALDFRPKLIICG-GSAYP-RDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-Y 234 (471)
Q Consensus 158 ~~~v~~~~~~iD~~~le~~~~~~~pklIi~~-~s~~g-~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~ 234 (471)
.++.+ |.+++++. .....-.|++. ++.+| ...|+.++.++++++|+++++=. ..++-+....|-+ +
T Consensus 194 ~~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~a----DplaL~LL~pPGe~G 262 (450)
T COG0403 194 VVDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAA----DPLALGLLKPPGEFG 262 (450)
T ss_pred Eeccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEe----chhHhhccCCccccC
Confidence 44322 77777776 43334445544 67788 55679999999999999888632 3344445556666 8
Q ss_pred ccEEEeCCCCc-----CCCCCeEEEEeeCCCC-CCC---------CCCCCCcccch---HhhhhhcCCCCCCCCCcHHHH
Q 012104 235 CHIVTTTTHKS-----LRGPRAGMIFYRKGPK-PPK---------KGQPEGAVYDF---EDKINFAVFPSLQGGPHNHQI 296 (471)
Q Consensus 235 aDiv~~s~~K~-----l~GprgG~i~~~~~~~-~~~---------~~~~~i~~~~l---~~~i~~~~~~~~~g~p~~~~i 296 (471)
|||++++++-. +.||..|++.++++.+ +++ ..|+.-.-..+ .+-|++..-....+ .++..
T Consensus 263 ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNIC--TnQaL 340 (450)
T COG0403 263 ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNIC--TNQAL 340 (450)
T ss_pred CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhh--HHHHH
Confidence 99999999976 6889999999988752 222 11221100001 11233322111111 22233
Q ss_pred HHHHHH--HHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEeeCCCCCeeE--EEEccCCCCCHHHHHHHHhhcCeE
Q 012104 297 GALAVA--LKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVTGGTENHLV--LWDLRPLGLTGNKVEKLCDLCNIT 370 (471)
Q Consensus 297 aa~a~a--l~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~~~~~~~~~--~v~~~~~~~~~~~~~~~L~~~gI~ 370 (471)
.|++++ .-.+...++++..+++...+.+|+++|++. |+.++.. .++- .+.+.. -....+.+.....||-
T Consensus 341 lA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~---~fFdt~~v~~~~--~~~~~l~~~~~~~G~~ 415 (450)
T COG0403 341 LALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFD---HFFDTFTVRVPE--EVAEALLAAAIAGGIN 415 (450)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccc---cceeeEEEecch--hHHHHHHHHHHhcCCc
Confidence 333322 223445688999999999999999999954 6887532 3332 333321 1123334444456666
Q ss_pred eccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 371 VNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 371 v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
++.- ....+=+++...+ +++|++.+.+++..
T Consensus 416 L~~~---------~~~~~~ia~tEt~----t~~~i~~l~~~~~~ 446 (450)
T COG0403 416 LRRV---------DADTVLIALTETT----TKEDIDALVAAFGG 446 (450)
T ss_pred eeee---------cCCceEEEeeccc----CHHHHHHHHHHHhh
Confidence 6432 1223444443333 47899999888754
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.11 E-value=7.4e-08 Score=99.10 Aligned_cols=307 Identities=17% Similarity=0.140 Sum_probs=158.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcC-CCCCCCceeeecCChHHHHHHHHHHhc-CCC
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFH-LDPTQWGVNVQPYSGSPANFAAYTAVL-EPH 121 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~sGt~A~~~~~~all-~pG 121 (471)
.|.|.+|+.+.+..-.. + . .....++| ..+++.+++. .+ -....+|||+|+.+++.... -.|
T Consensus 66 ~p~v~~Ai~~q~~~~~~-------~-~-~~~~~~~~--la~~l~~~~p~~~-----~v~f~~sGseA~e~AlklAr~~tg 129 (431)
T PRK06209 66 YPPVVEAVREALQDGCN-------F-T-RPSAIELD--AAESFLELIDGAD-----MVKFCKNGSDATSAAVRLARAYTG 129 (431)
T ss_pred CHHHHHHHHHHHHhCcC-------C-C-CCCHHHHH--HHHHHHHhCCccc-----eEEEecCHHHHHHHHHHHHHHHhC
Confidence 68899988877754321 1 1 11111222 2355666663 22 23557899999999887431 123
Q ss_pred -CEEEEeC-CCCCC-c-ccccccccCCccceeccce--e--EEEeeeecCCCCCCCHHHHHHHhhhC--CCcEEEEcC--
Q 012104 122 -DRIMGLD-LPSGG-H-LTHGYYTSGGKKISATSIY--F--ESLPYKVNSSTGYIDYDKLEEKALDF--RPKLIICGG-- 189 (471)
Q Consensus 122 -D~Vl~~~-~~~~g-~-~s~~~~~~~g~~~~~~g~~--~--~~~~~~v~~~~~~iD~~~le~~~~~~--~pklIi~~~-- 189 (471)
.+|+... -.|.| + ..|+. .....+.. . ....+ ..-|++++++++... ++..|++.+
T Consensus 130 r~~i~~~~~~~~h~~~~~~~g~------~~~~~~~~~~~~~~~~~~------~~~d~~~l~~~l~~~~~~~aavi~Epv~ 197 (431)
T PRK06209 130 RDLVARCADHPFFSTDDWFIGT------TPMSAGIPASVSALTVTF------RYNDIASLEALFEDHPGRIACVILEPAT 197 (431)
T ss_pred CCeEEEeccCcccccccccccc------CCCCCCCChhHhcccccc------CCCCHHHHHHHHHhCCCCEEEEEEcccc
Confidence 4565551 11111 1 01221 00001100 0 01111 134899999988643 244555542
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccccchhhcccc-CCCCCC-CccEEEeCCCCcCCC-CCeEEEEeeCCCCCCCCC
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQE-AANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKGPKPPKKG 266 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~-~~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~~~~~~~~ 266 (471)
+..+..-.+++++++|+++|+++|+|++| .|+...+. ...-+. ..|+++ +.|.|.| -.+|.++++++
T Consensus 198 g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~~~~------- 267 (431)
T PRK06209 198 ADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAGKRE------- 267 (431)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEEHHH-------
Confidence 22222334789999999999999999999 47643210 110111 357755 5699865 24677777763
Q ss_pred CCCCcccchHhh--h---h-hcCC-CCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc----CCce
Q 012104 267 QPEGAVYDFEDK--I---N-FAVF-PSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTG----KGYS 335 (471)
Q Consensus 267 ~~~i~~~~l~~~--i---~-~~~~-~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~----~g~~ 335 (471)
+.+. + + ...| .+..-+++...+++..++++.+.++ ...+++.++.++|++.|++ .++.
T Consensus 268 --------i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~~~ 336 (431)
T PRK06209 268 --------YMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDE---DVIERLHEQGAKLAAGVNEAAAEHGLQ 336 (431)
T ss_pred --------HHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3332 1 1 0111 1111123444555555567766543 3456666677777777654 3443
Q ss_pred E-ee-CCCCCeeEEEEccCCCCCH----HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 336 L-VT-GGTENHLVLWDLRPLGLTG----NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 336 i-~~-~~~~~~~~~v~~~~~~~~~----~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
. +. .+....+.++...+.+... ..+.+.|.+.||.+. .++|+. ..+++|++++.
T Consensus 337 ~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p--------------~l~is~------~ht~~dId~~l 396 (431)
T PRK06209 337 DHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMP--------------SLVVSY------AHGDADIERTI 396 (431)
T ss_pred eEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcccc--------------cccccc------cCCHHHHHHHH
Confidence 2 11 1221122222212111111 134566778898751 145542 23589999999
Q ss_pred HHHHHHHHHH
Q 012104 410 EFLHRAVTLT 419 (471)
Q Consensus 410 ~~i~~~l~~~ 419 (471)
+.+.+++...
T Consensus 397 ~~l~~~l~~~ 406 (431)
T PRK06209 397 DAVHGALGVY 406 (431)
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 364
>PRK07036 hypothetical protein; Provisional
Probab=99.10 E-value=1.2e-07 Score=98.42 Aligned_cols=320 Identities=16% Similarity=0.107 Sum_probs=164.9
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCC-CcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYY-GGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~-~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
.|.|.+++...+.. ..... .+. ..++. . .++ .+++.+++....+ ....++|||+|+.+++....
T Consensus 69 ~p~v~~Ai~~q~~~-~~~~~---~~~~~~~~~--~-~~l-ae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 137 (466)
T PRK07036 69 REEMADAIADQARR-LPYYT---PFGDMTNAP--A-AEL-AAKLAELAPGDLN---HVFLTTGGSTAVDSALRFVHYYFN 137 (466)
T ss_pred CHHHHHHHHHHHHh-Ccccc---cccccCCHH--H-HHH-HHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 68899888776643 21111 110 01111 1 222 3556666542221 23557899999998887431
Q ss_pred --C-C-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeec-CCCCCC--------CHHHH
Q 012104 119 --E-P-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVN-SSTGYI--------DYDKL 173 (471)
Q Consensus 119 --~-p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~-~~~~~i--------D~~~l 173 (471)
. + ..+|+...-.|.|.- .+. ++..+. .+..++.+.. ...... ..+.+
T Consensus 138 ~~g~t~r~~Ii~~~~~YHG~t-~~a-------~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 209 (466)
T PRK07036 138 VRGRPAKKHIITRGDAYHGST-YLT-------ASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEF 209 (466)
T ss_pred hcCCCCccEEEEEcCccCCcc-Hhh-------hcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHH
Confidence 1 2 368888876654431 111 111111 0111111100 000011 12445
Q ss_pred HHHhhhC---CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC---CCCCC-CccEEEe
Q 012104 174 EEKALDF---RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA---ANPFE-YCHIVTT 240 (471)
Q Consensus 174 e~~~~~~---~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~---~~p~~-~aDiv~~ 240 (471)
++.+... ++..|++. ....|...+ +++++++|+++|+++|+|+++. |+--.|.. ..-+. ..|+++.
T Consensus 210 ~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~~~~~~~gv~PDivt~ 288 (466)
T PRK07036 210 EDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVT-GFGRLGHFFASEAVFGIQPDIITF 288 (466)
T ss_pred HHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCcCchhhhhhhhcCCCCCEEEE
Confidence 5555432 33455554 333455554 7899999999999999999985 54222211 10122 4688876
Q ss_pred CCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc------CCCC-CCCCCcHHHHHHHHHHHHHhccHHH
Q 012104 241 TTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA------VFPS-LQGGPHNHQIGALAVALKQASTPAF 311 (471)
Q Consensus 241 s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~------~~~~-~~g~p~~~~iaa~a~al~~~~~~~~ 311 (471)
.|.|.|. ..|.+++++ ++.+.+... ...+ ++++ +....++....++.+.++
T Consensus 289 --gK~l~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~Le~i~~~-- 348 (466)
T PRK07036 289 --AKGLTSGYQPLGAVIISE---------------RLLDVISGPNAKGNVFTHGFTYSG-HPVACAAALKNIEIMERE-- 348 (466)
T ss_pred --ccccccCccccEEEEEcH---------------HHHHHHhcccCcCcccccCCCCCC-CHHHHHHHHHHHHHHHhC--
Confidence 5998663 356666766 344433211 1111 2222 333333333455554332
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-------CC---HHHHHHHHhhcCeEeccCCcCC
Q 012104 312 KAYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-------LT---GNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 312 ~~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
+..+++.+..++|.+.|++. .+.++. .+.+ .++.+.+.... .+ ...+.+.|.+.||.+.+.
T Consensus 349 -~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---- 422 (466)
T PRK07036 349 -GLCEHVREVGPYFEERLASLRELPLVGDVRGDH-LMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL---- 422 (466)
T ss_pred -CHHHHHHHHHHHHHHHHHHhccCCCEEEEEeec-eEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec----
Confidence 45566777777777777653 222211 1222 23445553211 01 234666778899998531
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+.+|+..+.. ++++|++++.+.+.++++..
T Consensus 423 ------~~~~~l~Ppl~----it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 423 ------EHLCVLSPPLI----ITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred ------CCEEEEeCCCc----CCHHHHHHHHHHHHHHHHHH
Confidence 14688875433 35899999999999988653
No 365
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.10 E-value=3.8e-07 Score=94.31 Aligned_cols=320 Identities=13% Similarity=0.068 Sum_probs=167.6
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+- ..... ..+ ..+ ..+ ++ .+++.++++...+ -...+.|||+|+.+++....
T Consensus 71 ~~p~v~~Ai~~ql~~~-~~~~~-~~~--~~~--~~~-~l-Ae~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~~ 139 (453)
T PRK06943 71 ANPRINAALKDQLDTL-EHAML-AGC--THE--PAI-EL-AERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAWR 139 (453)
T ss_pred CCHHHHHHHHHHHHhc-CCccc-ccc--CCH--HHH-HH-HHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3689999888776432 11000 001 111 122 23 3556667653321 23557899999998887541
Q ss_pred ---CC-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCC--CC-------CCCHHHH
Q 012104 119 ---EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSS--TG-------YIDYDKL 173 (471)
Q Consensus 119 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~--~~-------~iD~~~l 173 (471)
.+ ..+|+...-.|.|.-. + .++.++. ....++++-... .. .-|++.+
T Consensus 140 ~rg~~~r~~Ii~~~~~yHG~t~-g-------als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 211 (453)
T PRK06943 140 NRGRGDKREFVCLANGYHGETI-G-------ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADV 211 (453)
T ss_pred HhCCCCCCEEEEECCCcCCCcH-H-------hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHH
Confidence 12 3679888866644310 1 1111211 011122211000 00 0135777
Q ss_pred HHHhhhC--CCcEEEEcC---CCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeC
Q 012104 174 EEKALDF--RPKLIICGG---SAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~--~pklIi~~~---s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s 241 (471)
++.+..+ +...|++.+ ...|... =+++++++|+++|+++|.|+.+. |+--.|..- .-+. ..|+++.+
T Consensus 212 ~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~T-G~GRtG~~fa~~~~gv~PDivt~g 290 (453)
T PRK06943 212 RRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAV-GCGRTGTFFACEQAGVWPDFLCLS 290 (453)
T ss_pred HHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCCCcchhHHHhCCCCCCeEeee
Confidence 7777532 334444432 2233322 25788999999999999999986 652223211 0112 46898875
Q ss_pred CCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh-----cC-CCCCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-----AV-FPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 242 ~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~-----~~-~~~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
|.|.|. ..|.+++++ ++.+.+.. .. ..+++++ +....++..+.++.+.++ +
T Consensus 291 --Kgl~gG~~Pi~av~~~~---------------ei~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~i~~~---~ 349 (453)
T PRK06943 291 --KGISGGYLPLSLVLSRD---------------AIFAAFYDDDVTRGFLHSHSYTG-NPLACRAALATLDLFAED---D 349 (453)
T ss_pred --hhhccCcccceEEEEcH---------------HHHHhhcccCccCCccCCCCCCC-CHHHHHHHHHHHHHHHhc---C
Confidence 998653 456777776 33333321 11 1112222 233333333455555432 3
Q ss_pred HHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCC
Q 012104 314 YAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPG 386 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 386 (471)
..+++.+..++|.+.|++. ....+. .+.+ .+.-+++.... .. ...+.+.+.++||.+.+. .+
T Consensus 350 l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G-l~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~----------g~ 418 (453)
T PRK06943 350 VLARNARKSARLRAALAPLAAHPQVRHLRQRG-TIFAFDVALDGDAARTFSRRFFEAALERELLLRPI----------GT 418 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccc-cEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec----------CC
Confidence 4566666677777777654 111111 1222 23444553211 11 234667778899998542 14
Q ss_pred eeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 387 GVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 387 ~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+||..+.. ++++|++++.+.+++++..
T Consensus 419 ~l~~~Ppl~----it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 419 TVYLMPPYV----LDDDEIAWLAERTRATLDA 446 (453)
T ss_pred EEEEeCCCc----CCHHHHHHHHHHHHHHHHH
Confidence 699986544 4589999999999998865
No 366
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=1.3e-07 Score=91.05 Aligned_cols=283 Identities=16% Similarity=0.168 Sum_probs=165.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCCCCceeeecCCh-HHHHHHHHHHhc-CCCCEEEEeCCCCCCcccccccccCCccceec
Q 012104 73 EFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSG-SPANFAAYTAVL-EPHDRIMGLDLPSGGHLTHGYYTSGGKKISAT 150 (471)
Q Consensus 73 ~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sG-t~A~~~~~~all-~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~ 150 (471)
+.+..+.+...+.+.+.=| .++.| -+|..++| |.|...++..++ .+.|-||++-|-|+-+- +.+...
T Consensus 113 qGv~~vR~~VA~~I~rRDG-~p~~p-~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYs---------Ati~l~ 181 (475)
T KOG0258|consen 113 QGVPGVRKHVAEFIERRDG-IPADP-EDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYS---------ATISLL 181 (475)
T ss_pred cCChhHHHHHHHHHHhccC-CCCCH-HHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhH---------HHHHHh
Confidence 3334444444455656666 33334 35555565 568888887775 68899999999887431 123333
Q ss_pred cceeEEEeeeecC-CCCCCCHHHHHHHhhh----CCCc-EEEEc-CCCCCcccc---HHHHHHHHHHhCCEEEEeccccc
Q 012104 151 SIYFESLPYKVNS-STGYIDYDKLEEKALD----FRPK-LIICG-GSAYPRDWD---YARFRAVADKCGALLLCDMAHIS 220 (471)
Q Consensus 151 g~~~~~~~~~v~~-~~~~iD~~~le~~~~~----~~pk-lIi~~-~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~ 220 (471)
|. ..++|-+|+ .+|.+|.++|++...+ .+|+ ++++| .||+|.+.. +++|..+|.+.|++|+.|+.|-
T Consensus 182 ~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ- 258 (475)
T KOG0258|consen 182 GG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQ- 258 (475)
T ss_pred CC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHH-
Confidence 32 445665665 4699999999987754 4576 44567 799998775 5677788999999999999875
Q ss_pred hhhcccc--CCC------CC--CCcc----EEEeCCCCcC---CCCCeEEEEe-eCCCCCCCCCCCCCcccchHh-----
Q 012104 221 GLVAAQE--AAN------PF--EYCH----IVTTTTHKSL---RGPRAGMIFY-RKGPKPPKKGQPEGAVYDFED----- 277 (471)
Q Consensus 221 glv~~g~--~~~------p~--~~aD----iv~~s~~K~l---~GprgG~i~~-~~~~~~~~~~~~~i~~~~l~~----- 277 (471)
.-++.+. +.+ .+ ++.| +-..|+||.. +|+|||++=. +-.- .+. ..+.+
T Consensus 259 ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~p--------rv~-~qi~Kl~si~ 329 (475)
T KOG0258|consen 259 DNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDP--------RVK-QQIKKLASIK 329 (475)
T ss_pred hhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCCh--------hHH-HHHHHHHhhh
Confidence 3333321 111 01 1333 3345666773 5789998733 2110 000 00111
Q ss_pred ---------hhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEE
Q 012104 278 ---------KINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVL 347 (471)
Q Consensus 278 ---------~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~ 347 (471)
..+..+.|-..|.+..+...+ +-+.........++.+.+.+++. |+... ...+..+.+
T Consensus 330 lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-----------Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~f 397 (475)
T KOG0258|consen 330 LCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-----------EKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLF 397 (475)
T ss_pred hcCCccchhhhceecCCCCCCCcchhhhhh-----------hhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeec
Confidence 112223333344444333211 22345566777888889999887 77663 233444433
Q ss_pred --EEccC--------CCCCHHHH--HHHHhhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 348 --WDLRP--------LGLTGNKV--EKLCDLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 348 --v~~~~--------~~~~~~~~--~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
+++++ .++.++.+ .++|++-||.+-|++-+|-. .++=++|..+
T Consensus 398 P~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~--~GtyH~R~Ti 452 (475)
T KOG0258|consen 398 PQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQK--EGTYHFRTTI 452 (475)
T ss_pred ccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCC--CceeEEEEee
Confidence 23332 24455554 78999999999888776632 1234788876
No 367
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.07 E-value=1.7e-07 Score=97.09 Aligned_cols=320 Identities=16% Similarity=0.090 Sum_probs=167.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+-. .+. .+...++. .+ ++ .+++.+++....+ -....+|||+|+.+++....
T Consensus 73 ~~p~v~~Ai~~ql~~l~-~~~---~~~~~~~~--~~-~l-ae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~~ 141 (460)
T PRK06916 73 QVPELDEAIREQLNKIA-HST---LLGLANVP--SI-LL-AEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYWQ 141 (460)
T ss_pred CCHHHHHHHHHHHHhCC-Ccc---ccccCCHH--HH-HH-HHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 46889998887775421 111 11011121 12 22 3566677643222 24567899999998887432
Q ss_pred ---CC-CCEEEEeCCCCCCcccccccccCCccceeccce------------eEEEeeee--c-CCCC------CCCHHHH
Q 012104 119 ---EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIY------------FESLPYKV--N-SSTG------YIDYDKL 173 (471)
Q Consensus 119 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~------------~~~~~~~v--~-~~~~------~iD~~~l 173 (471)
.+ ..+|+...-.|.|.-. + .++.++.. ...++++- . +... .-|++.+
T Consensus 142 ~~g~tgr~~ii~~~~~YHG~t~-~-------als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 142 NKGKPKKQRFVTLKNAYHGDTI-G-------AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred hcCCCCCcEEEEECCcCCcccH-H-------hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 23 3688888866644311 1 11111110 11122210 0 0000 1235667
Q ss_pred HHHhhhC--CCcEEEEcC---CCCCccc-c---HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeC
Q 012104 174 EEKALDF--RPKLIICGG---SAYPRDW-D---YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~--~pklIi~~~---s~~g~~~-d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s 241 (471)
++.+..+ +...|++.+ ...|... | +++++++|+++|+++|+|+++. |+--.|..- .-+. ..|+++.
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~T-G~GRtG~~~a~~~~gv~PDiv~~- 291 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVAT-GFGRTGKMFACEHENVTPDIMTA- 291 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhh-CCCcCchhhHHHhcCCCCCeeee-
Confidence 7777532 334555432 2233332 2 5788999999999999999985 652223211 0112 4688865
Q ss_pred CCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh------cCC-CCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF------AVF-PSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 242 ~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~------~~~-~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
.|.|.|. ..|.+++++ ++.+.+.. ..+ .+++++ +....++..++++.+.++
T Consensus 292 -gK~l~gG~~Pi~av~~~~---------------ei~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~--- 351 (460)
T PRK06916 292 -GKGLTGGYLPIAITVTTD---------------EIYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEKT--- 351 (460)
T ss_pred -ehhhhcCccccceeeecH---------------HHHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHhc---
Confidence 5987643 356666666 33333321 111 123333 222333333455554332
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCC-------CC---HHHHHHHHhhcCeEeccCCcCCC
Q 012104 313 AYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLG-------LT---GNKVEKLCDLCNITVNKNAVFGD 379 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~-------~~---~~~~~~~L~~~gI~v~~~~~p~~ 379 (471)
.+.+++.++.++|.+.|++. .+..+. .+.+ .++-+.+.... .+ ...+...|.+.||.+.+.
T Consensus 352 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G-lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----- 425 (460)
T PRK06916 352 NLIEQVARKTEYVATQLEDLFALKHVGDIRQLG-LMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL----- 425 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCC-ceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec-----
Confidence 35566777777788777654 122211 1222 23334442211 01 235667788899998542
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.+|+..+.. ++++|++++.+.+++++..
T Consensus 426 -----g~~l~~~Ppl~----it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 426 -----GNTIVFMPPLA----STIDELDEMLRILYKAISD 455 (460)
T ss_pred -----CCEEEEeCCcc----cCHHHHHHHHHHHHHHHHh
Confidence 25789865433 4589999999999998864
No 368
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.06 E-value=3.3e-07 Score=95.08 Aligned_cols=213 Identities=14% Similarity=0.077 Sum_probs=112.8
Q ss_pred CHHHHHHHhhhC--CCcEEEEcC---CCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-Ccc
Q 012104 169 DYDKLEEKALDF--RPKLIICGG---SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCH 236 (471)
Q Consensus 169 D~~~le~~~~~~--~pklIi~~~---s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aD 236 (471)
+++.+++.+... ++..|++.+ ...|...+ +++++++|+++|+++|.|+.+. |+--.|..- .-+. ..|
T Consensus 222 ~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~T-GfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 222 AADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIAT-GFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchHHHhcCCCCC
Confidence 356777777532 334455432 23343322 5788999999999999999986 652223211 0112 468
Q ss_pred EEEeCCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh-----cCC-CCCCCCCcHHHHHHHHHHHHHhcc
Q 012104 237 IVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF-----AVF-PSLQGGPHNHQIGALAVALKQAST 308 (471)
Q Consensus 237 iv~~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~-----~~~-~~~~g~p~~~~iaa~a~al~~~~~ 308 (471)
+++.+ |.|.|. ..|.+++++ ++.+.+.. ... .+++++ +....++...+++.+.+
T Consensus 301 iv~~g--Kgl~gG~~Plaav~~~~---------------ei~~~~~~~~~~~~~~h~~T~~g-npl~~Aaa~a~L~~i~~ 362 (472)
T PRK08742 301 LLCLS--KGLTGGFLPLSAVLATQ---------------QLYDAFLDDSRERAFLHSHSYTG-NPLACAAALATLDIFAD 362 (472)
T ss_pred EEEEc--ccccCCCCCcceeeccH---------------HHHHHhhccCccCccCcCCCCCc-cHHHHHHHHHHHHHHHH
Confidence 98875 998643 356666665 33333321 111 112222 23333333345555543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCCC-----C-----HHHHHHHHhhcCeEeccCC
Q 012104 309 PAFKAYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLGL-----T-----GNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 309 ~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~~-----~-----~~~~~~~L~~~gI~v~~~~ 375 (471)
++ ..++..+..++|.+.++.. .+.++. .+. ..++-+.+....- + ...+.+.+.+.||.+.+.
T Consensus 363 ~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~-Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~- 437 (472)
T PRK08742 363 DD---VIARNQPTAARMTQLAAQIGEHPHVADVRQA-GMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL- 437 (472)
T ss_pred CC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEecc-ceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec-
Confidence 33 3334444444444433321 122221 122 2233444422110 1 134556677899998541
Q ss_pred cCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 376 VFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 376 ~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.|||..|-. ++++|++++.+.|.++|..
T Consensus 438 ---------g~vi~~~PpL~----it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 438 ---------GDVLYWMPPYC----VDEAQLALLADTTRHAIDE 467 (472)
T ss_pred ---------CCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 25799976543 4589999999999998875
No 369
>PRK07483 hypothetical protein; Provisional
Probab=99.06 E-value=3.2e-07 Score=94.58 Aligned_cols=329 Identities=17% Similarity=0.133 Sum_probs=166.2
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+.+-.. -.++ ++ ..+. ..++ .+++.+++.-..+ -...+.|||+|+.+++....
T Consensus 47 ~~p~v~~av~~ql~~~~~-~~~~--~~-~~~~---~~~l-ae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~~ 115 (443)
T PRK07483 47 SHPRVIAAIHAQIDRLAY-AHTS--FF-TTEP---AEAL-ADRLVAAAPAGLE---HVYFVSGGSEAVEAALKLARQYFV 115 (443)
T ss_pred CCHHHHHHHHHHHHhccC-cccc--cc-CCHH---HHHH-HHHHHHhCCCCCC---EEEEcCCcHHHHHHHHHHHHHHHH
Confidence 468888888777754210 0011 11 1121 1222 2556666642211 23557899999998886431
Q ss_pred ---CCC-CEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecCCCC--CC--------CHHH
Q 012104 119 ---EPH-DRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNSSTG--YI--------DYDK 172 (471)
Q Consensus 119 ---~pG-D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~~~~--~i--------D~~~ 172 (471)
++| .+|+...-.|.|.-. +. ++.++. ....++++...... .. .+++
T Consensus 116 ~~g~~~r~~Ii~~~~~YHG~t~-~a-------~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK07483 116 EIGQPQRRHFIARRQSYHGNTL-GA-------LAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADE 187 (443)
T ss_pred hcCCCCCcEEEEECCCcCCcCH-HH-------hhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHH
Confidence 133 578888766644311 11 111110 01111111000000 00 1256
Q ss_pred HHHHhhhC---CCcEEEEcCC---CCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEE
Q 012104 173 LEEKALDF---RPKLIICGGS---AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVT 239 (471)
Q Consensus 173 le~~~~~~---~pklIi~~~s---~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~ 239 (471)
+++.+... +...|++.+- .-|...+ +++++++|+++|+++|+|+.+. |+--.|..- .-+. ..|+++
T Consensus 188 l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~ 266 (443)
T PRK07483 188 LEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDLVT 266 (443)
T ss_pred HHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCeee
Confidence 67655422 2345554422 2233332 6789999999999999999986 652222211 0112 368888
Q ss_pred eCCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhhc--CC-C-CCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 240 TTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFA--VF-P-SLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 240 ~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~--~~-~-~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
. .|.|.|. ..|.+++++ ++.+.+... .+ . +++++ +....++..+.++.+.++ +
T Consensus 267 ~--gK~l~gG~~Pi~av~~~~---------------~i~~~~~~~~~~~~h~~T~~g-npl~~aaa~a~l~~i~~~---~ 325 (443)
T PRK07483 267 I--AKGLGAGYQPIGAVLASD---------------RIYDAIADGSGFFQHGHTYLG-HATACAAALAVQRVIAED---G 325 (443)
T ss_pred e--hhhhccCccccEEEEEcH---------------HHHHHHhcCCCccccCCCCCC-CHHHHHHHHHHHHHHHhc---C
Confidence 7 4998653 356777776 344434321 11 1 12222 222333333355554332 4
Q ss_pred HHHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----CC-----HHHHHHHHhhcCeEeccCCcCCC
Q 012104 314 YAKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----LT-----GNKVEKLCDLCNITVNKNAVFGD 379 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~~-----~~~~~~~L~~~gI~v~~~~~p~~ 379 (471)
..+++.+..++|.+.|++. .+.++. .+.+ .++-+++.... .+ ...+.+.+.+.||.+.+.. +.
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~G-lm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~--~~ 402 (443)
T PRK07483 326 LLANVRARGEQLRARLRERLGQHPHVGDIRGRG-LFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMG--GT 402 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecc-cEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecC--cc
Confidence 5566667777777777642 232221 1222 23334442110 01 2346677788999986421 00
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
......+.+||..|-. ++++|++++.+.|.++|...
T Consensus 403 ~~~~~~~~l~~~PpL~----it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 403 IDGVRGDHVLLAPPFI----ITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred ccCCCCCEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 0000135799976543 45899999999999998753
No 370
>PRK06917 hypothetical protein; Provisional
Probab=99.05 E-value=4.8e-07 Score=93.40 Aligned_cols=329 Identities=12% Similarity=0.084 Sum_probs=169.7
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++.+.+... ...+. ..+ . .+ ...++ .+++.+++....+ ....++|||+|+.+++....
T Consensus 48 ~hp~v~~Ai~~ql~~~-~~~~~-~~~-~-~~---~~~~l-ae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~~ 116 (447)
T PRK06917 48 GVKEIADAIKEQAEEV-SFVYR-SQF-T-SE---PAEKL-AKKLSDLSPGDLN---WSFFVNSGSEANETAMKIAIQHFQ 116 (447)
T ss_pred CCHHHHHHHHHHHhhC-cCccc-ccc-C-CH---HHHHH-HHHHHHhCCCCCC---EEEEeCChHHHHHHHHHHHHHHHH
Confidence 4799999988877542 11111 011 1 11 12223 3556666643221 23557899999999887541
Q ss_pred ---CC-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeec---CCCC------CCCHHHH
Q 012104 119 ---EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVN---SSTG------YIDYDKL 173 (471)
Q Consensus 119 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~---~~~~------~iD~~~l 173 (471)
.+ ..+|+...-.|.|.-. +. ++..+. .+..++++.. +.+. .-|.+.+
T Consensus 117 ~rg~t~r~~ii~~~~~yHG~t~-~a-------ls~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 188 (447)
T PRK06917 117 ERGIQGKHKILSRWMSYHGITM-GA-------LSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATEL 188 (447)
T ss_pred hcCCCCCCEEEEECCCcCCccH-HH-------HHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHH
Confidence 13 3688888866544311 11 111110 0011111100 0000 0134667
Q ss_pred HHHhhhC---CCcEEEEcCC---CCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEe
Q 012104 174 EEKALDF---RPKLIICGGS---AYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTT 240 (471)
Q Consensus 174 e~~~~~~---~pklIi~~~s---~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~ 240 (471)
++.+..+ +...|++.+- .-|...+ +++++++|+++|+++|+|+++. |+--.|..- .-+. ..|+++.
T Consensus 189 e~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~ 267 (447)
T PRK06917 189 ETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL 267 (447)
T ss_pred HHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe
Confidence 7777643 2445554421 2223222 5788999999999999999986 752222211 0112 3688765
Q ss_pred CCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh---cCCC-CCCCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 241 TTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF---AVFP-SLQGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 241 s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~---~~~~-~~~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
.|.|.|. ..|.+++++ ++.+.+.. ..+. +++++ +....++...+++.+.++ +.
T Consensus 268 --gK~l~~G~~Pi~a~~~~~---------------~i~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~---~l 326 (447)
T PRK06917 268 --GKGLGAGYTPIAATVVSD---------------RVMEPILRGSRSIMSGHTLSA-NPLSAATALAVLEYMEKH---NL 326 (447)
T ss_pred --eehhccCCcceEEEEEcH---------------HHHHHHhccCcccccccCCCC-CHHHHHHHHHHHHHHHHC---CH
Confidence 5998753 366777766 34443332 1121 22222 233333333456554332 35
Q ss_pred HHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCCC-----C--C---HHHHHHHHhhcCeEeccCCcCCCC
Q 012104 315 AKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPLG-----L--T---GNKVEKLCDLCNITVNKNAVFGDS 380 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~~-----~--~---~~~~~~~L~~~gI~v~~~~~p~~~ 380 (471)
.+++.++.++|.+.|++. .+.++. .+.+ .++.+.+.... . + ...+.+.|.+.||.+.+... ..
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G-l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~ 403 (447)
T PRK06917 327 PEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKG-LLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVA--GQ 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc-eEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccc--cc
Confidence 566667777777777653 122221 1222 23344442110 0 1 23456777889999865310 00
Q ss_pred CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 381 SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 381 ~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.....+.+|+..+-. ++++|++++.+.+.++++..
T Consensus 404 ~g~~~~~i~l~Ppl~----it~~eid~~~~~l~~~l~~~ 438 (447)
T PRK06917 404 DGKEGDAVIIAPPMT----ITYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CCCCCCEEEEECCCc----CCHHHHHHHHHHHHHHHHHH
Confidence 001136899986544 34899999999999998753
No 371
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.02 E-value=4.2e-07 Score=94.17 Aligned_cols=279 Identities=16% Similarity=0.156 Sum_probs=143.1
Q ss_pred CChHHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccce---ecc--ceeEEEeeeecCC--------C-CC
Q 012104 104 YSGSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKIS---ATS--IYFESLPYKVNSS--------T-GY 167 (471)
Q Consensus 104 ~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~---~~g--~~~~~~~~~v~~~--------~-~~ 167 (471)
.||++|+.+++... .....+|+...-.|.|.- .+.....+.... ..+ ..+..++++.... + ..
T Consensus 134 ~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t-~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 212 (464)
T PRK06938 134 PTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMS-QGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVR 212 (464)
T ss_pred CCcHHHHHHHHHHHHHhhCCCeEEEECCccCCcc-HHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHH
Confidence 69999999988754 223468888876664431 111100000000 000 0112222221100 0 00
Q ss_pred CCHHHHHHHhhhC-----CCcEEEEcC--CCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-
Q 012104 168 IDYDKLEEKALDF-----RPKLIICGG--SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE- 233 (471)
Q Consensus 168 iD~~~le~~~~~~-----~pklIi~~~--s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~- 233 (471)
.+.+.+++.+.+. ++..|++.+ ..-|...+ +++++++|+++|+++|.|+.+. |+--.|... .-+.
T Consensus 213 ~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t-GfGRtG~~~a~e~~gv 291 (464)
T PRK06938 213 ANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS-GFGRTGKMFAFEHAGI 291 (464)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcHHHHHHhcCC
Confidence 2367788877642 244555442 22233222 5789999999999999999986 652222210 0112
Q ss_pred CccEEEeCCCCcCCC-CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 234 YCHIVTTTTHKSLRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 234 ~aDiv~~s~~K~l~G-prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
..|+++.+ |.|.| -..|.++++++ + +.+......+++++ +....++..+.++.+.++
T Consensus 292 ~PDiv~~g--KglggG~PlsAv~~~~~---------------~-~~~~~~~~~~T~~g-npla~Aaa~a~L~~l~~~--- 349 (464)
T PRK06938 292 IPDVVVLS--KAIGGSLPLAVVVYREW---------------L-DTWQPGAHAGTFRG-NQMAMAAGSATLRYIKEH--- 349 (464)
T ss_pred CCCEEEee--ccccCCCceEEEeehhH---------------h-hccCCCCCCCCCCc-CHHHHHHHHHHHHHHHHh---
Confidence 46898875 99864 23466666652 2 22221111222232 222333333345554332
Q ss_pred HHHHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEEccCC-CC---------C---HHHHHHHHhhcCeEeccCC
Q 012104 313 AYAKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWDLRPL-GL---------T---GNKVEKLCDLCNITVNKNA 375 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~~~~~-~~---------~---~~~~~~~L~~~gI~v~~~~ 375 (471)
+..+++.+..++|.+.|+++ .+.++. .+. ..++-+.+... +. + ...+...|.++||.+.+..
T Consensus 350 ~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g 428 (464)
T PRK06938 350 RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGG 428 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecc-ceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecC
Confidence 34556666666777766553 222221 122 22344455321 10 1 2345666778999986421
Q ss_pred cCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 376 VFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 376 ~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
...+.||+..+.. ++++|++++.+.+.+++..
T Consensus 429 -------~~~~~l~~~Ppl~----it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 429 -------RHGSVVRFLPPLI----ITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred -------CCCCEEEEECCCc----cCHHHHHHHHHHHHHHHHH
Confidence 0135799975443 4589999999999998864
No 372
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.02 E-value=8.6e-08 Score=98.73 Aligned_cols=209 Identities=14% Similarity=0.157 Sum_probs=116.7
Q ss_pred CHHHHHHHhhhC--CCcEEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC----CCCC-Cc
Q 012104 169 DYDKLEEKALDF--RPKLIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA----NPFE-YC 235 (471)
Q Consensus 169 D~~~le~~~~~~--~pklIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~----~p~~-~a 235 (471)
+++.+++++.++ +...|++. ....|...+ +++++++|+++|+++|+|++|. |+-..|... ..+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQT-GVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeee-CCCCCcchhHHHhcCCCCCC
Confidence 456777777543 23455544 344466665 7899999999999999999995 763333210 1122 37
Q ss_pred cEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHH
Q 012104 236 HIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYA 315 (471)
Q Consensus 236 Div~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~ 315 (471)
|++++ .|.|.| ||+++.++ .+.. .......++.++ +....++..++++.+..+ +..
T Consensus 316 Di~t~--gK~lg~--gG~~~~~~---------------~~~~-~~~~~~~~T~~g-np~~~aaa~a~L~~l~~~---~l~ 371 (464)
T TIGR00699 316 DMVTF--SKKFQT--AGYFFHDP---------------AFRP-NKPYRQFNTWMG-DPSRALILREIIQEIKRK---DLL 371 (464)
T ss_pred CEEEe--hhhhcc--CCccccch---------------hccC-CCCcccccCCCC-CHHHHHHHHHHHHHHHhc---CHH
Confidence 88765 598842 24444332 1110 000001112222 333333333456655432 344
Q ss_pred HHHHHHHHHHHHHHHcCC--ce-EeeC--C-CCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeE
Q 012104 316 KQVKANAVALGNYLTGKG--YS-LVTG--G-TENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVR 389 (471)
Q Consensus 316 ~~~~~na~~l~~~L~~~g--~~-i~~~--~-~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iR 389 (471)
+++.+..++|.+.|++.. +. ++.. + ....++-+++.... ....+.+.|.+.||.+... ..+.||
T Consensus 372 ~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-~~~~i~~~~~~~Gvl~~~~---------g~~~ir 441 (464)
T TIGR00699 372 ENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-KRDKLLKKARNNGVNIGGC---------GVKAIR 441 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-HHHHHHHHHHHCCcEEecC---------CCCeEE
Confidence 555566677777776542 33 2221 1 12334445653211 1345677777889998642 136799
Q ss_pred EecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 390 IGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 390 ig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
|..+.. ++++|++.+.+.|.+++
T Consensus 442 ~~Ppl~----it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 442 LRPMLV----FQKHHADIFLEIISKII 464 (464)
T ss_pred EeCCCC----CCHHHHHHHHHHHHHhC
Confidence 986544 45899999999998764
No 373
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.00 E-value=3.1e-07 Score=94.51 Aligned_cols=209 Identities=15% Similarity=0.150 Sum_probs=112.0
Q ss_pred HHHHHHHhhh--CCCcEEEEc--CCCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccC-C-CCCC-CccEE
Q 012104 170 YDKLEEKALD--FRPKLIICG--GSAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEA-A-NPFE-YCHIV 238 (471)
Q Consensus 170 ~~~le~~~~~--~~pklIi~~--~s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~-~p~~-~aDiv 238 (471)
++++++.+.. .++..|++. ....|... -+++|+++|+++|+++|+|++|. |+-..|.. . .-++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4555566643 234555544 23334332 46899999999999999999997 65333321 0 1122 46888
Q ss_pred EeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHh-hhh-hcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHH
Q 012104 239 TTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFED-KIN-FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (471)
Q Consensus 239 ~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~-~i~-~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~ 316 (471)
+. .|.+ |-+|++..++ + . ++.. ... .....++.++ +....++..++++.+.+++ ..+
T Consensus 284 ~~--gK~~--~~~g~~~~~~-i----------~--~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~l~~~~---l~~ 342 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGRR-V----------D--EVADNVFAVPSRLNSTWGG-NLVDMVRATRILEIIEEER---LVD 342 (431)
T ss_pred Ee--cccC--ccceEEecch-H----------H--HhhhhcccCccccCCCCCC-CHHHHHHHHHHHHHHHhcC---HHH
Confidence 75 5876 4466665443 1 0 1111 011 0011122222 2233333334566554322 344
Q ss_pred HHHHHHHHHHHHHHcC--Cce-EeeCCC-CCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEec
Q 012104 317 QVKANAVALGNYLTGK--GYS-LVTGGT-ENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGT 392 (471)
Q Consensus 317 ~~~~na~~l~~~L~~~--g~~-i~~~~~-~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~ 392 (471)
++.+..++|.+.|++. .+. ++..-. ...++.+.+.... ....+.+.|.++||.+.+. ....+|+..
T Consensus 343 ~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~~---------g~~~lr~~P 412 (431)
T TIGR03251 343 NARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-DRDEVIRQLYREGVLLLGC---------GERSIRFRP 412 (431)
T ss_pred HHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-HHHHHHHHHHhCCeEEecC---------CCCeEEEEC
Confidence 5555666666666542 122 222111 1234455654211 2345777788999998542 125799987
Q ss_pred CCCCCcCCCHHHHHHHHHHHHH
Q 012104 393 PAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 393 ~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
+.. .+++|++++.+.+.+
T Consensus 413 ~l~----~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 413 PLT----VTREEIDAAIDAIRR 430 (431)
T ss_pred Ccc----CCHHHHHHHHHHHHh
Confidence 654 458999999998865
No 374
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.00 E-value=5.9e-07 Score=93.13 Aligned_cols=321 Identities=12% Similarity=0.082 Sum_probs=166.0
Q ss_pred CcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc----
Q 012104 43 TSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL---- 118 (471)
Q Consensus 43 ~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all---- 118 (471)
-.|.|.+++...+..- ..... ..+. .+ ...++ .+++.+++....+ -...+.||++|+.+++....
T Consensus 64 ~~p~v~~Ai~~ql~~l-~~~~~-~~~~--~~---~~~~l-ae~L~~~~p~~~~---~v~f~~sGsEAve~AlKlAr~~~~ 132 (466)
T PRK07030 64 ANPRINQRIKDQVDQL-EHVIL-AGFS--HE---PVIEL-SERLVKITPPGLS---RCFYADNGSSAIEVALKMSFHYWR 132 (466)
T ss_pred CCHHHHHHHHHHHHhc-CCccc-cccC--CH---HHHHH-HHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 3688999887776432 11110 0111 11 11223 3556666642221 23557899999998887541
Q ss_pred ---CC-CCEEEEeCCCCCCcccccccccCCccceeccc------------eeEEEeeeecC--CCC-------CCCHHHH
Q 012104 119 ---EP-HDRIMGLDLPSGGHLTHGYYTSGGKKISATSI------------YFESLPYKVNS--STG-------YIDYDKL 173 (471)
Q Consensus 119 ---~p-GD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~------------~~~~~~~~v~~--~~~-------~iD~~~l 173 (471)
.+ ..+|+...-.|.|.-. +. ++..+. ....++++... ..+ .-+++.+
T Consensus 133 ~~g~t~r~~ii~~~~~yHG~t~-ga-------~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~l 204 (466)
T PRK07030 133 NRGKPRKKRFVTLTNSYHGETL-AA-------MSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHM 204 (466)
T ss_pred HhCCCCCcEEEEECCCcCcccH-HH-------HhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHH
Confidence 12 3678888866544310 10 111111 01112211000 000 1135667
Q ss_pred HHHhhhC--CCcEEEEcC---CCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeC
Q 012104 174 EEKALDF--RPKLIICGG---SAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTT 241 (471)
Q Consensus 174 e~~~~~~--~pklIi~~~---s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s 241 (471)
++.+..+ +...|++.+ ...|...+ +++++++|+++|+++|+|+.+. |+--.|..- .-+. ..|+++++
T Consensus 205 e~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~T-GfGRtG~~~a~~~~gv~PDiv~~g 283 (466)
T PRK07030 205 EQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV-GFGRTGTMFACEQAGIRPDFLCLS 283 (466)
T ss_pred HHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCccccchHHHhcCCCCCEEeee
Confidence 7777532 234444432 22333222 5789999999999999999986 652222210 1112 46898874
Q ss_pred CCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh------c-CCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 242 THKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF------A-VFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 242 ~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~------~-~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
|.|.|. ..|.+++++ ++.+.+.. . ...+++++ +....++..++++.+.++
T Consensus 284 --Kgl~gG~~Pi~av~~~~---------------ei~~~~~~~~~~~~~~~h~~T~~g-npla~aaa~a~L~~i~~~--- 342 (466)
T PRK07030 284 --KALTGGYLPLAAVLTTD---------------TVYQAFYDDYPTLRAFLHSHSYTG-NPLACAAALATLDIFEQD--- 342 (466)
T ss_pred --hhccCCcccceEEEecH---------------HHHHHHhcccccccccccCCCCCC-CHHHHHHHHHHHHHHHhc---
Confidence 998654 456777776 34443321 1 11122222 233333333456655432
Q ss_pred HHHHHHHHHHHHHHHHHHcC-CceEee--CCCCCeeEEEEccCCCC-------C---HHHHHHHHhhcCeEeccCCcCCC
Q 012104 313 AYAKQVKANAVALGNYLTGK-GYSLVT--GGTENHLVLWDLRPLGL-------T---GNKVEKLCDLCNITVNKNAVFGD 379 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~-g~~i~~--~~~~~~~~~v~~~~~~~-------~---~~~~~~~L~~~gI~v~~~~~p~~ 379 (471)
+..++..+..++|.+.|++. .+..+. .+. ..++-+.+..... + ...+.+.+.+.|+.+.+.
T Consensus 343 ~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----- 416 (466)
T PRK07030 343 NVIENNRALARRMAEATAHLADHPHVAEVRQT-GMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL----- 416 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEec-eeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec-----
Confidence 34566666677777777653 222211 122 2234445432110 1 134667777899998541
Q ss_pred CCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 380 SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 380 ~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
.+.+|+..+.. ++++|++++.+.+.++++..
T Consensus 417 -----g~~i~~~Ppl~----it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 -----GSVVYFLPPYV----ITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -----CCEEEEECCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 25799875433 45899999999999998753
No 375
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.99 E-value=2.4e-08 Score=93.32 Aligned_cols=279 Identities=19% Similarity=0.199 Sum_probs=156.0
Q ss_pred eeeecCChHHHHHHHHHHh--cCCCCEEEEeCCCCCCcccccccccCCccceecccee-EEEeee-ecCCCCCCCHHHHH
Q 012104 99 VNVQPYSGSPANFAAYTAV--LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYF-ESLPYK-VNSSTGYIDYDKLE 174 (471)
Q Consensus 99 ~~v~~~sGt~A~~~~~~al--l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~-~~~~~~-v~~~~~~iD~~~le 174 (471)
.-||..|||.|+.+...-| .=+..+|.+.+|++..|.. .+...++ .+-.|+ .|.++..+|++.+.
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~-----------if~~aGf~tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHA-----------IFEKAGFTTVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred cceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHH-----------HHHHcCCceeeeeeeecCCCceecHHHHH
Confidence 3578889999988755433 3356789999999988732 1222222 222232 24466789999988
Q ss_pred HHhhhCCCc-EEE---EcCCCCCcccc---HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC------C-Ccc-EEE
Q 012104 175 EKALDFRPK-LII---CGGSAYPRDWD---YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF------E-YCH-IVT 239 (471)
Q Consensus 175 ~~~~~~~pk-lIi---~~~s~~g~~~d---~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~------~-~aD-iv~ 239 (471)
.-++.-.++ +|+ |-+||+|.... +..|++..++.+.+.+.|.||- |+..+....+.+ . +.. +|+
T Consensus 170 sdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQ-GfASGD~~~DawAiR~fV~~g~e~fv~ 248 (410)
T KOG1412|consen 170 SDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQ-GFASGDLDADAWAIRYFVEQGFELFVC 248 (410)
T ss_pred HHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhc-ccccCCccccHHHHHHHHhcCCeEEEE
Confidence 888643333 333 34899997654 4566666777899999999986 754332221221 1 222 788
Q ss_pred eCCCCc--CCCCCeEEEEe--eCC-CCCCCCCCCCCcccchHhhhhhc-CCCCCCCCCcHHHHHHHHHHHHHhccHHHHH
Q 012104 240 TTTHKS--LRGPRAGMIFY--RKG-PKPPKKGQPEGAVYDFEDKINFA-VFPSLQGGPHNHQIGALAVALKQASTPAFKA 313 (471)
Q Consensus 240 ~s~~K~--l~GprgG~i~~--~~~-~~~~~~~~~~i~~~~l~~~i~~~-~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~ 313 (471)
-||.|. |.++|.|-+.+ +++ .+. .+. ..+...++.. -.|.-+|.-..+.+...- .+.+--...++.
T Consensus 249 QSFaKNfGlYneRvGnltvv~~n~a~i~------~v~-SQl~lviR~~~SNPPAyGArIV~kvL~tP-~lre~W~~sik~ 320 (410)
T KOG1412|consen 249 QSFAKNFGLYNERVGNLTVVVNNPAVIA------GVK-SQLTLVIRSNWSNPPAYGARIVHKVLSTP-ELREQWIQSIKT 320 (410)
T ss_pred hhhhhhcccccccccceEEEecChhHHH------HHH-HHHHHHHhhccCCCcchhhHHHHHHhcCH-HHHHHHHHHHHH
Confidence 999999 67888775433 332 000 000 0111111111 112222211111111110 111100112334
Q ss_pred HHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeE--EEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 314 YAKQVKANAVALGNYLTGKGYSLVTGGTENHLV--LWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 314 ~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~--~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
...++.+.+..|++.|..+| ++|+-.|++ +--|+-.|+++.++..+.+.+.|.+.+. + ||+
T Consensus 321 MssRI~~MR~aLrd~L~aL~----TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~-----------G--RIn 383 (410)
T KOG1412|consen 321 MSSRIKKMRTALRDHLVALK----TPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSD-----------G--RIN 383 (410)
T ss_pred HHHHHHHHHHHHHHHHHhcC----CCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecC-----------C--cEe
Confidence 44455556666666666554 345555542 1112334889999999999999998541 3 444
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
. .|+....++.++.+|+++++..
T Consensus 384 i-----sGLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 384 I-----SGLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred e-----eccccccHHHHHHHHHHHHHhh
Confidence 4 2455678999999999988753
No 376
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.96 E-value=9.5e-07 Score=83.53 Aligned_cols=313 Identities=19% Similarity=0.183 Sum_probs=161.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh------
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV------ 117 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al------ 117 (471)
.|.+++++.+....-+ ..++-+|. ....++ .+.+.++||-+. .+...+|.+|+..++.-.
T Consensus 77 hpki~~aLqeq~~kLt---lssrafYn--d~~~~f----~~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy~ 142 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLT---LSSRAFYN--DVLGEF----AEYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGYR 142 (427)
T ss_pred CHHHHHHHHHHHhHhh---hhhHHHhh--hhHHHH----HHHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHHh
Confidence 5888888777664322 12222331 122233 367889999775 244567889999887532
Q ss_pred cC--CCC-EEEEeCCCCCCcccccccccCCccceeccce-----eEE-EeeeecCCCCCCCHHHHHHHhhhCCCcEEEEc
Q 012104 118 LE--PHD-RIMGLDLPSGGHLTHGYYTSGGKKISATSIY-----FES-LPYKVNSSTGYIDYDKLEEKALDFRPKLIICG 188 (471)
Q Consensus 118 l~--pGD-~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~-----~~~-~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~ 188 (471)
.+ |.| .+++.... .+ ||--. ..+++++.. |.. .|..++ .-..-|.++|+..++..+...+++.
T Consensus 143 ~K~ip~nka~il~~~~--nF--hGrT~---~ais~s~d~ds~~~fgp~~P~~~~-~v~Y~d~eale~~l~~~~vaaFivE 214 (427)
T KOG1402|consen 143 KKNIPKNKAKILSAEN--NF--HGRTL---GAISLSTDPDSWDGFGPFLPGVVD-KVPYGDAEALEVALKSPNVAAFIVE 214 (427)
T ss_pred hccCCccceeEEEecc--cc--cCcee---eeEEecCCcchhhccCCCCCCcce-eeccCCHHHHHHHhcCCCeeEEEee
Confidence 12 534 33333211 11 32100 012222211 110 111011 0123478889888876444544443
Q ss_pred --CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccC-CCCCC--CccEEEeCCCCcCCCC--CeEEEEee
Q 012104 189 --GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEA-ANPFE--YCHIVTTTTHKSLRGP--RAGMIFYR 257 (471)
Q Consensus 189 --~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~-~~p~~--~aDiv~~s~~K~l~Gp--rgG~i~~~ 257 (471)
+-.-|.++| +++.+++|.+|++++|.|+.|. |+--.|.+ ....+ ..|+++.. |.|.|. .-..+++.
T Consensus 215 PIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQT-Gl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~ 291 (427)
T KOG1402|consen 215 PIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQT-GLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLAD 291 (427)
T ss_pred ccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhh-cccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEec
Confidence 222333332 6788999999999999999997 76554542 11122 35888855 887663 12344455
Q ss_pred CCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcCC--c
Q 012104 258 KGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGKG--Y 334 (471)
Q Consensus 258 ~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~g--~ 334 (471)
+ ++.-.++..-...+ +|.|. ...+|+ ++++.+.+ ++..++....-..|+.+|.++. +
T Consensus 292 ~---------------~im~~~~pgeHgsTyggNpL-g~~vai-Aalevi~e---ekL~era~~lG~~l~~~L~~l~~~~ 351 (427)
T KOG1402|consen 292 D---------------DIMLNIKPGEHGSTYGGNPL-GCAVAI-AALEVIVE---EKLVERAAKLGEILRDQLNKLQKKF 351 (427)
T ss_pred H---------------HHHhccCCCccccccCCChH-HHHHHH-HHHHHHHH---HHHHHHHHHHHHHHHHHHHhccccc
Confidence 5 23222332211112 23332 222222 24544432 2444555555566777777652 2
Q ss_pred ----eEeeCCCCCeeEEEEccCC---CCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHH
Q 012104 335 ----SLVTGGTENHLVLWDLRPL---GLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQ 407 (471)
Q Consensus 335 ----~i~~~~~~~~~~~v~~~~~---~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~ 407 (471)
..+.+ . ..+..+.+.+. +.+.-++--.|.+.|+...+ .....||+..|-. +.++|+++
T Consensus 352 p~~v~~VRG-r-Gl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp---------tH~~IiRfaPPL~----I~e~dl~e 416 (427)
T KOG1402|consen 352 PHVVKEVRG-R-GLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP---------THGNIIRFAPPLV----ISEEDLRE 416 (427)
T ss_pred cchhheeec-c-ceEEEEEeccccccchhHHHHHHcccccccccCC---------CCCCeEEecCCcc----cCHHHHHH
Confidence 22222 2 22333333332 23444456667788887643 2346899986533 56999999
Q ss_pred HHHHHHHHH
Q 012104 408 IGEFLHRAV 416 (471)
Q Consensus 408 l~~~i~~~l 416 (471)
-.++|.+++
T Consensus 417 g~e~i~k~i 425 (427)
T KOG1402|consen 417 GIEAIEKTI 425 (427)
T ss_pred HHHHHHHHh
Confidence 999998866
No 377
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.94 E-value=6.9e-07 Score=89.85 Aligned_cols=215 Identities=19% Similarity=0.173 Sum_probs=120.5
Q ss_pred CHHHHHHHhhhCCCc---EEEEc---CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCC--CCC-Cc
Q 012104 169 DYDKLEEKALDFRPK---LIICG---GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAAN--PFE-YC 235 (471)
Q Consensus 169 D~~~le~~~~~~~pk---lIi~~---~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~--p~~-~a 235 (471)
+.++||+++.++.|. .+|+- ....|..++ ++++++||++||+++|+|+.-. |+--.|.+.- -.. -.
T Consensus 199 ~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~t-GFGRTG~~FA~e~~gi~P 277 (449)
T COG0161 199 AADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVAT-GFGRTGKMFACEHAGIVP 277 (449)
T ss_pred HHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeeccee-CCCcCchhhhhhhcCCCC
Confidence 367888888887654 33322 333444443 6899999999999999999843 6532232210 011 35
Q ss_pred cEEEeCCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcccchHhhhhh----cCCCCC-CCCCcHHHHHHHHHHHHHhcc
Q 012104 236 HIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF----AVFPSL-QGGPHNHQIGALAVALKQAST 308 (471)
Q Consensus 236 Div~~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~----~~~~~~-~g~p~~~~iaa~a~al~~~~~ 308 (471)
||++.+ |.|.|. ..|.+++.+ ++.+.+.. ..+.|. +++......+|+ ..|+.+.+
T Consensus 278 Di~~~a--KGLT~GY~Pl~a~l~~~---------------~I~~~~~~~~~~~f~HG~TYsghPlacAaAl-a~L~i~e~ 339 (449)
T COG0161 278 DILCLA--KGLTGGYLPLSAVLTSD---------------RIYEAFSDGDAGAFMHGHTYSGNPLACAAAL-ANLDILEE 339 (449)
T ss_pred Ceeeec--ccccccchhhHhHhhhH---------------HHHHHHhcccCCeeccCCccccCHHHHHHHH-HHHHHHHh
Confidence 788765 988663 224444444 23332222 112221 112111222222 23333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcC--CceEeeCC-CCCeeEEEEccCC-C-CC------HHHHHHHHhhcCeEeccCCcC
Q 012104 309 PAFKAYAKQVKANAVALGNYLTGK--GYSLVTGG-TENHLVLWDLRPL-G-LT------GNKVEKLCDLCNITVNKNAVF 377 (471)
Q Consensus 309 ~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~~~-~~~~~~~v~~~~~-~-~~------~~~~~~~L~~~gI~v~~~~~p 377 (471)
+.+.+++.+...+|.+.|++. +...+..- .-..+.-+++... + -. +..+.+.+.++|+.+++.
T Consensus 340 ---e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~--- 413 (449)
T COG0161 340 ---EDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL--- 413 (449)
T ss_pred ---cCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---
Confidence 356778888888999999872 33333211 1122334454321 1 11 456788888999999873
Q ss_pred CCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 378 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 378 ~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
+ ..+=+..|.+ .++++++++.+.+.+++...
T Consensus 414 g-------~~i~~~PPli----it~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 414 G-------DVIYLMPPLI----ITREEIDELVDALREALDET 444 (449)
T ss_pred C-------CEEEEcCCcc----CCHHHHHHHHHHHHHHHHHH
Confidence 2 2455554444 35899999999999988764
No 378
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.92 E-value=1.7e-06 Score=89.70 Aligned_cols=186 Identities=16% Similarity=0.202 Sum_probs=101.6
Q ss_pred HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC-CeEEEEeeCCCCCCCCCCCCCccc
Q 012104 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP-RAGMIFYRKGPKPPKKGQPEGAVY 273 (471)
Q Consensus 198 ~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp-rgG~i~~~~~~~~~~~~~~~i~~~ 273 (471)
+++++++|+++|+++|.|+.+. |+--.|... .-+. ..|+++.+ |.|.|. ..|.++.++
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~t-GfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~--------------- 309 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQA-GFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK--------------- 309 (459)
T ss_pred HHHHHHHHHHcCCEEEEecchh-cCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH---------------
Confidence 5789999999999999999986 652222210 0112 46888874 998542 345555554
Q ss_pred chHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEee--CCCCCeeEEEE
Q 012104 274 DFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVT--GGTENHLVLWD 349 (471)
Q Consensus 274 ~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~--~~~~~~~~~v~ 349 (471)
++ +.+......+++++ +....++..+.++.+.++ ...+++.+..++|.+.|++. .+.++. .+. ..++-+.
T Consensus 310 ~~-~~~~~~~~~~T~~g-npla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm~gie 383 (459)
T PRK06931 310 EF-DAWQPGGHTGTFRG-NQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGR-GLMIGIE 383 (459)
T ss_pred HH-hhccCCCCCCCCCC-CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceEEEEE
Confidence 22 22221111222222 222333333355554332 34455555666666666543 122211 122 2233344
Q ss_pred ccCC-C---------CC---HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHH
Q 012104 350 LRPL-G---------LT---GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 416 (471)
Q Consensus 350 ~~~~-~---------~~---~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l 416 (471)
+... . .+ ...+...|.+.||.+.+.. ...+.+|+..+.. ++++|++++.+.+.+++
T Consensus 384 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-------~~~~~l~~~Ppl~----it~~eid~~~~~l~~~l 452 (459)
T PRK06931 384 IVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG-------RNGNVVRLLPPLL----ITQAECEEFIDRFEQAL 452 (459)
T ss_pred EccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC-------CCCCEEEEECCCC----cCHHHHHHHHHHHHHHH
Confidence 4221 0 01 1345666778999986421 1136799976544 45899999999999988
Q ss_pred HH
Q 012104 417 TL 418 (471)
Q Consensus 417 ~~ 418 (471)
..
T Consensus 453 ~~ 454 (459)
T PRK06931 453 LA 454 (459)
T ss_pred HH
Confidence 65
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.92 E-value=3.8e-08 Score=96.59 Aligned_cols=299 Identities=14% Similarity=0.124 Sum_probs=161.6
Q ss_pred HHHhcCCCCCCCceeeecCChHHHHHHHHHHhc--CCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC
Q 012104 86 ALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL--EPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS 163 (471)
Q Consensus 86 ~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all--~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~ 163 (471)
+.+..|+.... .+.+.|...-.++.++++++- ..++.|+.+...|-.-+ +.+...|....+++-...+
T Consensus 65 ~~~~~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~---------kai~~AGl~~~vV~~~~~~ 134 (389)
T PF05889_consen 65 ALRLAGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF---------KAIERAGLEPVVVENVLEG 134 (389)
T ss_dssp HHHHTTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH---------HHHHHTT-EEEEE-EEEET
T ss_pred HHHHcCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH---------HHHHhcCCeEEEeeccCCC
Confidence 33457876421 145555443356666677763 46788888876542111 2334455544455433344
Q ss_pred CCCCCCHHHHHHHhhhCCCc--EEEEc--CCCCCcccc-HHHHHHHHHHhCCEEEEeccccchhhc-cccCCCC--CCCc
Q 012104 164 STGYIDYDKLEEKALDFRPK--LIICG--GSAYPRDWD-YARFRAVADKCGALLLCDMAHISGLVA-AQEAANP--FEYC 235 (471)
Q Consensus 164 ~~~~iD~~~le~~~~~~~pk--lIi~~--~s~~g~~~d-~~~i~~ia~~~g~~livD~a~~~glv~-~g~~~~p--~~~a 235 (471)
+.-..|.+.+|+.+++..+. +.+.+ ...+|+..| +++|++||+++|++.++..||+.--.. -...... ....
T Consensus 135 d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRv 214 (389)
T PF05889_consen 135 DELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRV 214 (389)
T ss_dssp TEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTC
T ss_pred CeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCc
Confidence 44567889999999765443 44444 334789888 999999999999999999999640000 0000000 1246
Q ss_pred cEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCC-CCCCcHHHHHHHHHHHHHhccHHHHHH
Q 012104 236 HIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSL-QGGPHNHQIGALAVALKQASTPAFKAY 314 (471)
Q Consensus 236 Div~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~-~g~p~~~~iaa~a~al~~~~~~~~~~~ 314 (471)
|+++-|+-|.|--|-||.+++...- .....+.+. +|+- ..+|..... ..+..+...++...
T Consensus 215 da~vqS~dkNF~VPvGgai~As~~~-------------~~i~~vs~~-YpGRas~sp~ld~~----itLl~LG~~g~~~l 276 (389)
T PF05889_consen 215 DAFVQSTDKNFMVPVGGAIMASFDP-------------SGILAVSKE-YPGRASASPSLDLF----ITLLSLGCTGYGAL 276 (389)
T ss_dssp SEEEEEHHHHHCEESSHEEEEESSH-------------HHHHHHHHT-SHSHBTSHHHHHHH----HHHHHHHHHHHHHH
T ss_pred ceeeeecCCCEEecCCCcEEEecCH-------------HHHHHHHHH-hhhhhhcccchHHH----HHHHHHhhhHHHHH
Confidence 8899999999777877665554320 344444432 3442 223333322 22333333466677
Q ss_pred HHHHHHHHHHHHHHHHc----CCceEeeCCCCCee-EEEEccCCC-C---CHHHHHHHHhhcCeEeccCCcCCCC-----
Q 012104 315 AKQVKANAVALGNYLTG----KGYSLVTGGTENHL-VLWDLRPLG-L---TGNKVEKLCDLCNITVNKNAVFGDS----- 380 (471)
Q Consensus 315 ~~~~~~na~~l~~~L~~----~g~~i~~~~~~~~~-~~v~~~~~~-~---~~~~~~~~L~~~gI~v~~~~~p~~~----- 380 (471)
..+..++-.++.++|++ .|-++. ....||. +-+++.... + +...+...|-.+||.-..+..|...
T Consensus 277 l~~r~~~f~~l~erl~~~aee~~e~ll-~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh 355 (389)
T PF05889_consen 277 LKERKASFPYLKERLKKWAEEVGERLL-ETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSH 355 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEBS-SSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhc-CCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCccccc
Confidence 77777777777777654 364442 3235664 344554321 1 2356788888888874442222221
Q ss_pred -CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 381 -SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 381 -~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
..+...++-+. +..|++.+|++.+.+.|+++++
T Consensus 356 ~~~yp~~Ylt~A----saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 356 SSNYPCPYLTAA----SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SS--SSSEEEEE----E-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHH----HHhCCCHHHHHHHHHHHHHHhC
Confidence 11223566653 3478999999999999999874
No 380
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.92 E-value=1.7e-06 Score=89.32 Aligned_cols=212 Identities=15% Similarity=0.118 Sum_probs=115.5
Q ss_pred HHHHHHHhhh--CCCcEEEEc--CCCCCcc----ccHHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEE
Q 012104 170 YDKLEEKALD--FRPKLIICG--GSAYPRD----WDYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIV 238 (471)
Q Consensus 170 ~~~le~~~~~--~~pklIi~~--~s~~g~~----~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv 238 (471)
++++++++.. .++..|++. ....|.. -.+++++++|+++|+++|+|+++. |+--.|..- .-++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4566666653 245566654 2223332 246899999999999999999986 652222210 0112 46888
Q ss_pred EeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchH-hhhh-hcCCCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHH
Q 012104 239 TTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFE-DKIN-FAVFPSLQGGPHNHQIGALAVALKQASTPAFKAYAK 316 (471)
Q Consensus 239 ~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~-~~i~-~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~ 316 (471)
++ .|.++ -+|++..++ + . +.. ..+. .....++.++ +....++...+++.+.++ +..+
T Consensus 291 ~~--gK~l~--~~a~l~~~~-i----------~--~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~L~~l~~~---~l~~ 349 (443)
T PRK08297 291 AF--GKKTQ--VCGIMAGRR-V----------D--EVEDNVFAVSSRINSTWGG-NLVDMVRARRILEVIEED---GLVE 349 (443)
T ss_pred Ee--ccccc--ccceecchH-H----------H--HhhhhhccCccccCCCCCc-cHHHHHHHHHHHHHHHhc---CHHH
Confidence 74 69873 356665443 0 0 111 0111 0001122222 222333333345544332 4555
Q ss_pred HHHHHHHHHHHHHHcC--CceEe---eCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEe
Q 012104 317 QVKANAVALGNYLTGK--GYSLV---TGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIG 391 (471)
Q Consensus 317 ~~~~na~~l~~~L~~~--g~~i~---~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig 391 (471)
++.+..++|.+.|++. .+..+ ..+. ..++.+.+.... ....+.+.|.++||.+.+. ....+||.
T Consensus 350 ~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~~~i~~~~~~-~~~~~~~~l~~~Gvl~~~~---------~~~~lr~~ 418 (443)
T PRK08297 350 NAARQGEYLLARLEELAAEFPAVVSNVRGR-GLMCAFDLPTTA-DRDEVIRRLWEEGVLVLPC---------GERSIRFR 418 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceEEEEEecCHH-HHHHHHHHHHHCCEEEecC---------CCCeEEEE
Confidence 6666677777776553 12211 1122 345556664321 2345677777899998542 12569997
Q ss_pred cCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 392 TPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 392 ~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.+.. ++++|++++.+.+.+++..
T Consensus 419 P~l~----~t~~eid~~l~~l~~~l~~ 441 (443)
T PRK08297 419 PALT----VTTEEIDAAIDALRRALPE 441 (443)
T ss_pred CCcc----CCHHHHHHHHHHHHHHHHh
Confidence 6433 4589999999999988753
No 381
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.90 E-value=4.6e-07 Score=87.60 Aligned_cols=180 Identities=21% Similarity=0.268 Sum_probs=107.6
Q ss_pred HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----CccEEEeCCCCcCC-CCCeEEEEeeCCCCCCCCCCCCCcc
Q 012104 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----YCHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAV 272 (471)
Q Consensus 198 ~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~aDiv~~s~~K~l~-GprgG~i~~~~~~~~~~~~~~~i~~ 272 (471)
+++..++|+++|.++|.|+++. |+--.| +-..++ -.||+|. .|.+. |...|.+++..
T Consensus 235 lka~~~~v~k~Ggl~IaDEVqt-GfGRtG-~~wgfe~h~v~PDIvTm--AKgiGnG~Pl~AVvtt~-------------- 296 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQT-GFGRTG-HMWGFESHGVVPDIVTM--AKGIGNGFPLGAVVTTP-------------- 296 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhhh-cccccc-ccccccccCCCccHHHH--HhhccCCCcceeeecCH--------------
Confidence 5888999999999999999997 654444 223333 2467664 49874 33445555555
Q ss_pred cchHhhhhhcC--CCCCCCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC--CceEeeCCCCCeeEE-
Q 012104 273 YDFEDKINFAV--FPSLQGGPHNHQIGALAVALKQASTPAFKAYAKQVKANAVALGNYLTGK--GYSLVTGGTENHLVL- 347 (471)
Q Consensus 273 ~~l~~~i~~~~--~~~~~g~p~~~~iaa~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~--g~~i~~~~~~~~~~~- 347 (471)
++++.+++.. |..++|. .+...++++ .|+-+.+ +.++++..+...+|.+.|.+. ++.++..-.+.-++|
T Consensus 297 -EIa~v~~~~~~~fnTyggn-P~a~avg~a-VL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~G 370 (442)
T KOG1404|consen 297 -EIADVLNQKSSHFNTYGGN-PVACAVGLA-VLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLG 370 (442)
T ss_pred -HHHHHHHhccccccccCCC-chhHHHHHH-HHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEE
Confidence 5666665543 3334443 344444443 3443322 345555666667788877764 566654222222322
Q ss_pred EEc---c--CCCC---CHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHH
Q 012104 348 WDL---R--PLGL---TGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 412 (471)
Q Consensus 348 v~~---~--~~~~---~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i 412 (471)
+.+ + +... -+..+.+.+.+.|+.|.++.+.| ..+||..|-+ ++.+|++.+.+..
T Consensus 371 vE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G-------~vfriaPPlc----iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 371 VELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG-------NVFRIAPPLC----ITKEDIDFAVEYF 432 (442)
T ss_pred EEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc-------eEEEecCCee----ccHHHHHHHHHHH
Confidence 222 2 1111 12346788999999998887665 4899987644 4578987666655
No 382
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.85 E-value=4.8e-08 Score=92.68 Aligned_cols=332 Identities=18% Similarity=0.214 Sum_probs=191.4
Q ss_pred HHHhcc--CCeeEecCC-------CCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCC-
Q 012104 26 EKRRQC--RGIELIASE-------NFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPT- 95 (471)
Q Consensus 26 e~~~~~--~~i~li~s~-------n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~- 95 (471)
.-++.. ..|||..+. .++-|.|++|-......... . .|..-..+.++.+++ ++-+||..++
T Consensus 45 Afk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ld-----K-EYlpI~Gl~eF~k~s---akLa~G~~s~~ 115 (427)
T KOG1411|consen 45 AFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLD-----K-EYLPITGLAEFNKLS---AKLALGDNSPV 115 (427)
T ss_pred HHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhccc-----c-hhccccchHHHHHHH---HHHhhcCCchh
Confidence 344443 457776542 35568898887655431111 0 111112223443332 2234665331
Q ss_pred ----CCceeeecCChHHHHH--HHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCC
Q 012104 96 ----QWGVNVQPYSGSPANF--AAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYID 169 (471)
Q Consensus 96 ----~~~~~v~~~sGt~A~~--~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD 169 (471)
.. +.||+.|||.|+. +-+.+..-|+..|.+++|+++-|.. .....|...+...|- ++.+..+|
T Consensus 116 ik~~Ri-~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~---------if~~ag~~~~~yrYy-d~~t~gld 184 (427)
T KOG1411|consen 116 IKEKRI-VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN---------IFKDAGLPVKFYRYY-DPKTRGLD 184 (427)
T ss_pred hhccce-eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc---------cccccCcceeeeeec-cccccccc
Confidence 12 6788889987654 4555666789999999999998742 123345444444442 66788999
Q ss_pred HHHHHHHhhhCCCc-EEE---EcCCCCCccc---cHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC------C-Cc
Q 012104 170 YDKLEEKALDFRPK-LII---CGGSAYPRDW---DYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF------E-YC 235 (471)
Q Consensus 170 ~~~le~~~~~~~pk-lIi---~~~s~~g~~~---d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~------~-~a 235 (471)
++-+-+.+.+..+. +|+ |-+||+|... .+++|.++.++.+.+-+.|+||- |+..+....... . +-
T Consensus 185 ~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQ-GfaSG~~d~DA~avR~F~~~g~ 263 (427)
T KOG1411|consen 185 FKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQ-GFASGDLDKDAQAVRLFVEDGH 263 (427)
T ss_pred hHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhc-ccccCCchhhHHHHHHHHHcCC
Confidence 99977777653233 444 4489997554 46677788888999999999986 654332211111 1 22
Q ss_pred c-EEEeCCCCc--CCCCCeEE--EEeeCCCCCCCCCCCCCcccchHhh----hhhcCCCCCCCCCcHHH--HHHHHHHHH
Q 012104 236 H-IVTTTTHKS--LRGPRAGM--IFYRKGPKPPKKGQPEGAVYDFEDK----INFAVFPSLQGGPHNHQ--IGALAVALK 304 (471)
Q Consensus 236 D-iv~~s~~K~--l~GprgG~--i~~~~~~~~~~~~~~~i~~~~l~~~----i~~~~~~~~~g~p~~~~--iaa~a~al~ 304 (471)
+ +++-|+-|. |.|-|.|. |+|.+. +.+.+ ++..+.|. .+.|..|. |++....--
T Consensus 264 ~~~laQSyAKNMGLYgERvGa~svvc~~a--------------d~A~rV~SQlk~liRpm-YSnPP~hGArIv~~Il~d~ 328 (427)
T KOG1411|consen 264 EILLAQSYAKNMGLYGERVGALSVVCKDA--------------DEAKRVESQLKILIRPM-YSNPPLHGARIVATILSDP 328 (427)
T ss_pred ceEeehhhhhhcchhhhccceeEEEecCH--------------HHHHHHHHHHHHHhccc-ccCCCccchhhhhhccCCh
Confidence 3 678899999 56667665 456553 33333 33334443 34555543 332221111
Q ss_pred HhccH---HHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCee----EEEEccCCCCCHHHHHHHHhhcCeEeccCCcC
Q 012104 305 QASTP---AFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHL----VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVF 377 (471)
Q Consensus 305 ~~~~~---~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~----~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p 377 (471)
.+... +.+-...++...++.|.+.|.+.|-.. .-.|+ -.+-+ .|++.++++.+-.+..|...+.
T Consensus 329 ~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~----~W~hI~~QIGMF~f--Tgl~peQv~~l~ke~~iYmT~d--- 399 (427)
T KOG1411|consen 329 DLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPG----NWSHITKQIGMFCF--TGLNPEQVDWLTKEYHIYLTKD--- 399 (427)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCc----cHHHHHHhhheeee--cCCCHHHHHHHHhhheeeeccC---
Confidence 11111 334556677777778888887765322 11121 11222 3788999999999999998642
Q ss_pred CCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 378 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 378 ~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
=|||...++ ...+..+++.|+.+.+
T Consensus 400 ----------GRiS~aG~s-----s~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 400 ----------GRISMAGLS-----SSNVPYLADAIHAVTK 424 (427)
T ss_pred ----------ceEeecccc-----ccCCcccchhhHhHhc
Confidence 467764443 4567778888877543
No 383
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.82 E-value=2.2e-06 Score=93.52 Aligned_cols=284 Identities=14% Similarity=0.072 Sum_probs=163.7
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cC--CCCEEEEeCCCCCCcccccccccCCccceeccceeEEEe
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LE--PHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLP 158 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~--pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~ 158 (471)
.+..+++|.|.+-.. +.+. -.+|.+-.+++++. .. ...+|++.+-.|+.++..- +....+.+++++.
T Consensus 129 ~Qtmi~~LtGm~vaN--ASl~-D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~-------~t~~~~~g~~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLAN--ASLL-DEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVL-------RTRAEGFGFELVV 198 (954)
T ss_pred HHHHHHHHhCchhhh--hhhc-cchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHH-------HHhhhcCCcEEEE
Confidence 457889999998521 1221 13344444444444 22 2568888886665433200 0011222233332
Q ss_pred eeecCCCCCCCHHHHHHHhhhCCCcEEEE-cCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-Ccc
Q 012104 159 YKVNSSTGYIDYDKLEEKALDFRPKLIIC-GGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCH 236 (471)
Q Consensus 159 ~~v~~~~~~iD~~~le~~~~~~~pklIi~-~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aD 236 (471)
+++++.+.+ +.-.|++ .+|.+|.+.|+++|.+++++.|++++ +.+ .+++-+.+..|-+ +||
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~---d~laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAA---DLLSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEe---CHHHHhCCCChhhcCCc
Confidence 233333322 3333444 57889999999999999999999866 443 3344445556666 899
Q ss_pred EEEeCCCCc-----CCCCCeEEEEeeCCCCC-CC---------CCCCCCcccch---HhhhhhcCCCCCCCCCcHHHHHH
Q 012104 237 IVTTTTHKS-----LRGPRAGMIFYRKGPKP-PK---------KGQPEGAVYDF---EDKINFAVFPSLQGGPHNHQIGA 298 (471)
Q Consensus 237 iv~~s~~K~-----l~GprgG~i~~~~~~~~-~~---------~~~~~i~~~~l---~~~i~~~~~~~~~g~p~~~~iaa 298 (471)
|++++.+-- +.||..|++.++++++. ++ ..|+.-.-..+ .+-|++-.-....+ ..+.+.|
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNIC--T~qaL~A 339 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNIC--TAQVLLA 339 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhh--HHHHHHH
Confidence 998876643 67899999999876432 11 11221000011 11233221111111 2233333
Q ss_pred HHHHH--HHhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCee--EEEEccCCCCCHHHHHHHHhhcCeEeccC
Q 012104 299 LAVAL--KQASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHL--VLWDLRPLGLTGNKVEKLCDLCNITVNKN 374 (471)
Q Consensus 299 ~a~al--~~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~--~~v~~~~~~~~~~~~~~~L~~~gI~v~~~ 374 (471)
+++++ -.+..+++++..+++..++.+|++.|.+.|+++... .++ +.+++ +.+..++.+...+.||-++..
T Consensus 340 ~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~---~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~ 413 (954)
T PRK12566 340 NIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNR---HFFDTLTLEV---GGAQAAIIESAEAARINLRIL 413 (954)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccC---CccceEEEEc---cCCHHHHHHHHHHCCCeeEEe
Confidence 33332 223456789999999999999999999999988532 222 33444 214566767777788888752
Q ss_pred CcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 375 AVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 375 ~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
..+.+.|++...++ ++|++.+.+++.
T Consensus 414 ---------~~~~~~~s~de~~~----~~~~~~~~~~f~ 439 (954)
T PRK12566 414 ---------GRGRLGVSLDETCD----EATVARLFDIFL 439 (954)
T ss_pred ---------CCCeEEEEeCCCCC----HHHHHHHHHHhc
Confidence 12467788766554 789999998884
No 384
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.76 E-value=5.3e-06 Score=90.80 Aligned_cols=185 Identities=14% Similarity=0.029 Sum_probs=99.1
Q ss_pred HHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC--CeEEEEeeCCCCCCCCCCCCCcc
Q 012104 198 YARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP--RAGMIFYRKGPKPPKKGQPEGAV 272 (471)
Q Consensus 198 ~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp--rgG~i~~~~~~~~~~~~~~~i~~ 272 (471)
+++++++|+++|+++|.|+++. |+--.|..- .-+. ..||++.+ |.|.|. ..|.+++++
T Consensus 608 l~~lr~lc~~~gilLI~DEV~T-GfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~-------------- 670 (817)
T PLN02974 608 QRALVQVCRSRKIPVIFDEVFT-GLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATE-------------- 670 (817)
T ss_pred HHHHHHHHHHhCCEEEEeeccc-CCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcH--------------
Confidence 5788999999999999999986 763223211 1112 36898866 998654 456677766
Q ss_pred cchHhhhhh-----cCCCC-CCCCCcHHHHHHHHHHHHHhccHHH-HHHHHHHHHHHHHHHHHHH-cC-CceEee--CCC
Q 012104 273 YDFEDKINF-----AVFPS-LQGGPHNHQIGALAVALKQASTPAF-KAYAKQVKANAVALGNYLT-GK-GYSLVT--GGT 341 (471)
Q Consensus 273 ~~l~~~i~~-----~~~~~-~~g~p~~~~iaa~a~al~~~~~~~~-~~~~~~~~~na~~l~~~L~-~~-g~~i~~--~~~ 341 (471)
++.+.+.. ..+.+ ++++ +....|+...+++.+.+++. ....++.......|.+.|. .. .+..+. .+.
T Consensus 671 -~I~~~f~~~~~~~~~~hg~Ty~g-npl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~ 748 (817)
T PLN02974 671 -EVFEAFRGPSKLDALLHGHSYTA-HPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL 748 (817)
T ss_pred -HHHHhhccccccCCcccCCCCCc-CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee
Confidence 33333321 11111 2222 23333333345666554322 2222222333333344441 11 122211 111
Q ss_pred CCeeEEEEccCC----CCC---HHHHHHHHh-hcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 342 ENHLVLWDLRPL----GLT---GNKVEKLCD-LCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 342 ~~~~~~v~~~~~----~~~---~~~~~~~L~-~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
..+.-+++... +.+ +..+.+.+. +.||.+++. .+.||+-.|.+++ +++++++.+.|.
T Consensus 749 -Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~----------Gnvi~l~pP~~i~----~e~l~~~~~~l~ 813 (817)
T PLN02974 749 -GTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL----------GNVVYLMCGPTTS----PETCTRLLRKVY 813 (817)
T ss_pred -eeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec----------CCEEEEeCCCCCC----HHHHHHHHHHHH
Confidence 22334455321 111 234556666 899999652 2578987766654 899999999988
Q ss_pred HHH
Q 012104 414 RAV 416 (471)
Q Consensus 414 ~~l 416 (471)
+.|
T Consensus 814 ~~~ 816 (817)
T PLN02974 814 RRL 816 (817)
T ss_pred HHh
Confidence 765
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.74 E-value=1.9e-06 Score=85.04 Aligned_cols=319 Identities=14% Similarity=0.088 Sum_probs=174.4
Q ss_pred cchhHHHHHHHHHHHHHHhcCCCCCC------CceeeecCChHHHHHHHHHHh-------cCCC-----------CEEEE
Q 012104 71 GNEFIDEIENLCRSRALQTFHLDPTQ------WGVNVQPYSGSPANFAAYTAV-------LEPH-----------DRIMG 126 (471)
Q Consensus 71 g~~~~~~lE~~~~~~~~~lfg~~~~~------~~~~v~~~sGt~A~~~~~~al-------l~pG-----------D~Vl~ 126 (471)
.+....++|....+|+.++.+.+... -|.-|..+|.+.+++.++.+- ++.+ +-|+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 45677899999999999998876310 123344456777777666542 2223 22322
Q ss_pred eCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHHHhhhCC-----CcEEEEc--CCCCCccccHH
Q 012104 127 LDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEEKALDFR-----PKLIICG--GSAYPRDWDYA 199 (471)
Q Consensus 127 ~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~-----pklIi~~--~s~~g~~~d~~ 199 (471)
.+ ..+ |.+.. +.....+. +...++.| ++..++.+.|++++.+.. |-+|+++ .+..-..-++.
T Consensus 187 ~S--Dqa---hssve---ka~~i~~V--klR~l~td-~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~ 255 (511)
T KOG0628|consen 187 CS--DQA---HSSVE---KACLIAGV--KLRALPTD-ENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELE 255 (511)
T ss_pred ec--Ccc---cchHH---HhHhhcce--eEEEeecc-cCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHH
Confidence 21 122 22211 11122333 33344555 478999999999997643 4455543 33333445789
Q ss_pred HHHHHHHHhCCEEEEeccccchhhc-cccC---CCCCCCccEEEeCCCCcCCC-CCeEEEEeeCCCC-C-CCCCCCCCcc
Q 012104 200 RFRAVADKCGALLLCDMAHISGLVA-AQEA---ANPFEYCHIVTTTTHKSLRG-PRAGMIFYRKGPK-P-PKKGQPEGAV 272 (471)
Q Consensus 200 ~i~~ia~~~g~~livD~a~~~glv~-~g~~---~~p~~~aDiv~~s~~K~l~G-prgG~i~~~~~~~-~-~~~~~~~i~~ 272 (471)
+|..||+++|+||++|+||+ |-.+ .... -..++++|-+.+..|||+.- -.+..+..++... . ... ...+
T Consensus 256 elg~Vc~~~glWLHVDAAYA-Gsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~-vdp~-- 331 (511)
T KOG0628|consen 256 ELGPVCREEGLWLHVDAAYA-GSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFN-VDPL-- 331 (511)
T ss_pred HhcchhhhcCEEEEeehhhc-cccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeee-cChH--
Confidence 99999999999999999997 4222 1111 12345789999999999422 2333333333210 0 000 0000
Q ss_pred cchHh-hhhhc-CCCCCCCCCcHHHHHHH--HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-CceEeeCCCCCeeEE
Q 012104 273 YDFED-KINFA-VFPSLQGGPHNHQIGAL--AVALKQASTPAFKAYAKQVKANAVALGNYLTGK-GYSLVTGGTENHLVL 347 (471)
Q Consensus 273 ~~l~~-~i~~~-~~~~~~g~p~~~~iaa~--a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g~~i~~~~~~~~~~~ 347 (471)
.+.. ..... .+... .-|..+..-++ +..++.+.-+.+++|+++..+.++.+.+-+.+- -|+++. .-++-+
T Consensus 332 -yL~h~~~~~~~Dyrhw-qipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~---~~~lgL 406 (511)
T KOG0628|consen 332 -YLKHAYQGSAPDYRHW-QIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN---KRILGL 406 (511)
T ss_pred -hhcchhhccCCCcccc-ccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec---ccccce
Confidence 0000 00000 01111 12233333333 345566666678888888888888888777654 588753 234333
Q ss_pred EEccCCCCC--HHHHH-HHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 348 WDLRPLGLT--GNKVE-KLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 348 v~~~~~~~~--~~~~~-~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
+-|+.++.+ -+.+. +.-....|.+.+.++-+ .=.||+... +.-.+++||++--+.|.+....
T Consensus 407 vcFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~g------k~vlRf~V~---s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 407 VCFRLKGDNEINEALLNRLNSSGRIHLVPASLHG------KFVLRFAVC---SPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred eEEeecCCcHHHHHHHHHHHhcCcEEEEEeeecc------eEEEEEEec---CCCCcHHHHHHHHHHHHHHHHH
Confidence 334333322 23333 33345667776544322 236888753 3334588999888888776655
No 386
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.49 E-value=5.9e-05 Score=73.80 Aligned_cols=217 Identities=20% Similarity=0.168 Sum_probs=110.2
Q ss_pred HHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc------CCCC--EEEEeCCCCCCcccccccccCCccceeccceeE
Q 012104 84 SRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL------EPHD--RIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE 155 (471)
Q Consensus 84 ~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all------~pGD--~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~ 155 (471)
+.+.+..+-...+ -.....|||+||.+++.... .|-+ .++.+.-.|.|+- .|+...+ ..+..+..++
T Consensus 105 ~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~t-lgals~~--~~s~y~~~~~ 179 (433)
T KOG1401|consen 105 EVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRT-LGALSVT--GNSKYGLPFD 179 (433)
T ss_pred HHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcc-hhHHHhh--cccccCCCCC
Confidence 4455555322222 13457899999999886532 1223 3888887765542 2221100 0001111111
Q ss_pred EEeeeecCC---CCCCCHHHHHHHhhhCCC--cEEEEc--CCCCCc-ccc---HHHHHHHHHHhCCEEEEeccccchhhc
Q 012104 156 SLPYKVNSS---TGYIDYDKLEEKALDFRP--KLIICG--GSAYPR-DWD---YARFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 156 ~~~~~v~~~---~~~iD~~~le~~~~~~~p--klIi~~--~s~~g~-~~d---~~~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
. .-|+ -..-|..+++++++.++- ..||+. .-.-|. ..+ +..|+.+|+++|+++|.|+.+. |+--
T Consensus 180 p----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR 254 (433)
T KOG1401|consen 180 P----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGR 254 (433)
T ss_pred C----CCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-Cccc
Confidence 1 1111 124579999999988762 333332 111221 122 3467899999999999999987 6432
Q ss_pred cccC--CCCCC-CccEEEeCCCCcCCC-CCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCC---cHHHHH
Q 012104 225 AQEA--ANPFE-YCHIVTTTTHKSLRG-PRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGP---HNHQIG 297 (471)
Q Consensus 225 ~g~~--~~p~~-~aDiv~~s~~K~l~G-prgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p---~~~~ia 297 (471)
.|.. ..-+. ..||.|. -|-|.| ...|..++++ +..+.++... +.++|+. +.....
T Consensus 255 ~g~~~a~e~~~~~PDI~t~--aK~L~gGlPigA~~v~~---------------kV~~~i~~~~-~l~hg~Tf~gnpLacs 316 (433)
T KOG1401|consen 255 LGYGWAQEYFGVTPDITTV--AKPLGGGLPIGATGVRD---------------KVAEMISPGD-HLYHGGTFSGNPLACS 316 (433)
T ss_pred cchHHHHHHhCcCCcceee--hhhccCCceeEEEeehH---------------HHHhhcCCCC-ccccCcccCCChhhhh
Confidence 2210 01111 3477664 498754 4557777776 3444444321 1111211 222333
Q ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Q 012104 298 ALAVALKQASTPAFKAYAKQVKANAVALGNYLTG 331 (471)
Q Consensus 298 a~a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~ 331 (471)
+...++.++.++++ .+++.+.-+.|++.|.+
T Consensus 317 a~~~~l~~l~~~e~---~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 317 AGIKVLDELKDPET---LKNVSKIGKELRKLLDE 347 (433)
T ss_pred HHHHHHHHHcCHHH---HHHHHHHHHHHHHHHHH
Confidence 34457788777765 33444444455554443
No 387
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.35 E-value=8.3e-06 Score=81.27 Aligned_cols=194 Identities=16% Similarity=0.062 Sum_probs=95.8
Q ss_pred cHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhc-----
Q 012104 44 SFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVL----- 118 (471)
Q Consensus 44 s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all----- 118 (471)
.|.+.+++...+.... ...+. .+. .+ ...++ .+++.++++-..+ -.....||++|+..++....
T Consensus 34 ~p~i~~ai~~~~~~~~-~~~~~-~~~--~~---~~~~l-a~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~~ 102 (339)
T PF00202_consen 34 HPEIAEAIAEQANKLN-YVSFS-GFT--HP---EAAEL-AEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHNK 102 (339)
T ss_dssp -HHHHHHHHHHHHHCS-SCSTT-TSE--EH---HHHHH-HHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHhhhcc-ccccc-cee--cc---chhhh-hhhhhhccccccc---eeeeccCchHHHHHHHHHhhccccc
Confidence 6888888877654321 11111 110 11 12222 3567777732211 23456899999998886544
Q ss_pred --C-CCCEEEEeCCCCCCcccccccccCCccceec--cce-eEEEeeeecCCCCCCCHHH----------HHHHhhh---
Q 012104 119 --E-PHDRIMGLDLPSGGHLTHGYYTSGGKKISAT--SIY-FESLPYKVNSSTGYIDYDK----------LEEKALD--- 179 (471)
Q Consensus 119 --~-pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~--g~~-~~~~~~~v~~~~~~iD~~~----------le~~~~~--- 179 (471)
. ...+|+...-.|.|.-. +.....+...... ... ..+..++. .|+.. +++.+.+
T Consensus 103 ~~~~~r~~il~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (339)
T PF00202_consen 103 RAYTGRRKILAFEGSYHGRTL-GALSLTGNPPYRKGFGPLYPGVVFVPF------PDPAADEEEQACLNALEELIAALNA 175 (339)
T ss_dssp THHHTTTEEEEETTTB-TSSH-HHHHHSSSTHHHTTTCSSSTTEEEEET------TCHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred ccccCCceEEEeeeeeeccCc-ccccccCCccccccccccccccccccC------CccchhhhHHHHHHHHHHHHHhhcC
Confidence 2 34799999877655321 1100000000000 000 01111111 22222 3333322
Q ss_pred CCCcEEEEcC--CCCCccc----cHHHHHHHHHHhCCEEEEeccccchhhccccCC--CCCC-CccEEEeCCCCcCCCC-
Q 012104 180 FRPKLIICGG--SAYPRDW----DYARFRAVADKCGALLLCDMAHISGLVAAQEAA--NPFE-YCHIVTTTTHKSLRGP- 249 (471)
Q Consensus 180 ~~pklIi~~~--s~~g~~~----d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~--~p~~-~aDiv~~s~~K~l~Gp- 249 (471)
.+...|++.+ ...|... =+++++++|+++|+++|+|+.+. |+--.|..- ..+. ..|+++++ |.|.|.
T Consensus 176 ~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~t-G~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~ 252 (339)
T PF00202_consen 176 DEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQT-GFGRTGKFFASEHYGVDPDIVTFG--KGLGGGL 252 (339)
T ss_dssp GGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTT-TTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTS
T ss_pred CcEEEEEEeccccccCccccccchhhehcccccccccceecccccc-cccccCCccceecccccCcccccc--cchhhhh
Confidence 2233555542 2233322 15899999999999999999987 652223211 0011 46999987 998653
Q ss_pred CeEEEEeeC
Q 012104 250 RAGMIFYRK 258 (471)
Q Consensus 250 rgG~i~~~~ 258 (471)
..|.+++++
T Consensus 253 p~sav~~~~ 261 (339)
T PF00202_consen 253 PISAVLGSE 261 (339)
T ss_dssp SEEEEEEEH
T ss_pred hcccccccc
Confidence 457777776
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.07 E-value=0.0014 Score=61.72 Aligned_cols=338 Identities=18% Similarity=0.174 Sum_probs=170.2
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChHHHHH
Q 012104 32 RGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGSPANF 111 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~ 111 (471)
++|+-.+--....|+|.+|....+..- ....||. .+++-+-++...+.+=++ .+..++.||++||.
T Consensus 51 DCInNVaHvghchp~VV~A~~kQmat~----~tN~RFl-----hd~lv~cA~~l~stlPeL-----svc~F~NSGSEAND 116 (452)
T KOG1403|consen 51 DCINNVAHVGHCHPEVVRAGAKQMATI----STNNRFL-----HDELVQCARTLTSTLPEL-----SVCFFVNSGSEAND 116 (452)
T ss_pred HHhhhhhhcccCCHHHHHHHHHHHhHh----cccchhh-----HHHHHHHHHHHhhcCCCc-----eEEEEecCCchhhH
Confidence 455555555556788888876554222 1223432 244443333333333333 26777899999999
Q ss_pred HHHHHh---cCCCCEEEEeCCCCCCcccccccccCCcccee-ccc------eeEEEeee-e---------cC--CCCCCC
Q 012104 112 AAYTAV---LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISA-TSI------YFESLPYK-V---------NS--STGYID 169 (471)
Q Consensus 112 ~~~~al---l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~-~g~------~~~~~~~~-v---------~~--~~~~iD 169 (471)
+++.-. .+..| |++++-.|.||++... +. .+-.+ .|. ++.+-+.| + .+ +.+..-
T Consensus 117 LALRLAR~ftkhqD-vItldHAYHGHl~s~m--E~-SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Y 192 (452)
T KOG1403|consen 117 LALRLARNFTKHQD-VITLDHAYHGHLQSVM--EV-SPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALY 192 (452)
T ss_pred HHHHHHHhhcccCc-eEEEechhccceeeee--ec-cceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhh
Confidence 988643 44444 5566777888876210 00 00000 011 11111111 0 00 001122
Q ss_pred HHHHHHHhhhC--CC-c--EEEEc--CCCCCcccc----HHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC----C
Q 012104 170 YDKLEEKALDF--RP-K--LIICG--GSAYPRDWD----YARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE----Y 234 (471)
Q Consensus 170 ~~~le~~~~~~--~p-k--lIi~~--~s~~g~~~d----~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~----~ 234 (471)
.|.+++.+++. +- + ..+.. .|.-|.++| ++.+++..+.+|-..|.|+.+. |+---|.+-..+. -
T Consensus 193 ad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQv-GFGRvG~hyWafq~y~fi 271 (452)
T KOG1403|consen 193 ADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQV-GFGRVGSHYWAFQTYNFI 271 (452)
T ss_pred hhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhh-cccccchhhhhhhhhccc
Confidence 34555555431 11 1 11211 444555554 3566777788999999999997 6533344433333 2
Q ss_pred ccEEEeCCCCcCC-CCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhh---cCCCCCCCCCcHHHHHHHHHHHHHhccHH
Q 012104 235 CHIVTTTTHKSLR-GPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINF---AVFPSLQGGPHNHQIGALAVALKQASTPA 310 (471)
Q Consensus 235 aDiv~~s~~K~l~-GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~---~~~~~~~g~p~~~~iaa~a~al~~~~~~~ 310 (471)
.|||+.. |.|. |...+.+.+.+ ++++.+.. ..|..+.|.| ....+++++ ++....+.
T Consensus 272 PDIVtmg--KpmGNGhPVa~Vattk---------------eIA~Af~atgv~YFNTyGGnP-VsCAv~laV-m~v~e~E~ 332 (452)
T KOG1403|consen 272 PDIVTMG--KPMGNGHPVAAVATTK---------------EIAQAFHATGVEYFNTYGGNP-VSCAVGLAV-MRVCEDEN 332 (452)
T ss_pred cchheec--ccCCCCCeeeEEeccH---------------HHHHHhccccceehhccCCCc-hhHHHHHHH-HHHHhhhh
Confidence 5787755 7763 44557777776 45555543 2344443444 444444442 45544444
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEeeCCCC-CeeEEEEccCC---CC-CHHH---HHHHH-hhcCeEeccCCcCCCCC
Q 012104 311 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTE-NHLVLWDLRPL---GL-TGNK---VEKLC-DLCNITVNKNAVFGDSS 381 (471)
Q Consensus 311 ~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~-~~~~~v~~~~~---~~-~~~~---~~~~L-~~~gI~v~~~~~p~~~~ 381 (471)
+.+..+++-+....+...++. ..+++..-.+ ..++-+|+-.. .. +..+ +...| +.++|.++.. +
T Consensus 333 Lq~ha~~vG~~L~~lL~~~k~-kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaD------G 405 (452)
T KOG1403|consen 333 LQEHAQQVGEKLEVLLRRLKQ-KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSAD------G 405 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecC------C
Confidence 555555554433333333332 2344332122 22334565321 11 1222 33444 4567888753 1
Q ss_pred CCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHH
Q 012104 382 ALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLT 419 (471)
Q Consensus 382 ~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~ 419 (471)
| ..+.+.|-.|-+ +++++.+++...++++|...
T Consensus 406 P-h~NilKiKPPmC----Fneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 406 P-HRNILKIKPPMC----FNEENADEFVLGLDEILTVM 438 (452)
T ss_pred C-CCceeecCCCcc----cChhhHHHHHHHHHHHHHHH
Confidence 1 246777765433 56889999999999988754
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.01 E-value=0.0009 Score=63.16 Aligned_cols=309 Identities=13% Similarity=0.059 Sum_probs=170.6
Q ss_pred HHHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHhcCCC---CEEEEeCCCCCCcccccccccCCccceeccceeE--E
Q 012104 82 CRSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAVLEPH---DRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFE--S 156 (471)
Q Consensus 82 ~~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~all~pG---D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~--~ 156 (471)
+-..++.+.|+..++ +.| ..|=|.-+..++.++.+|- -+|+... .++.|..|.... .+...|...+ .
T Consensus 116 il~l~~~iVGA~e~E--vav-mNsLTvNlh~Ll~sFyKPTekR~KILlE~---kaFPSDhYAies--Q~~lhG~~~e~sm 187 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENE--VAV-MNSLTVNLHSLLISFYKPTEKRFKILLEK---KAFPSDHYAIES--QCKLHGISPENSM 187 (465)
T ss_pred hhhhhhhhccCCchh--hhh-HhhhhhHHHHHHHHhcCCcchhhhhhhcc---CCCCchHHHHHh--hhhhcCCChHHhe
Confidence 345678889998764 333 2344444455666777765 3566544 333332222211 1223343322 1
Q ss_pred EeeeecCCCCCCCHHHHHHHhhhCCC--cEEEEc--CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCC
Q 012104 157 LPYKVNSSTGYIDYDKLEEKALDFRP--KLIICG--GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (471)
Q Consensus 157 ~~~~v~~~~~~iD~~~le~~~~~~~p--klIi~~--~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~ 232 (471)
+.+.-.+....+..+++-+.|.+..- .+|+++ +--+|...|+.+|...-+..|+++=.|-||+.|-+ |.-+
T Consensus 188 ~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV-----pL~L 262 (465)
T KOG3846|consen 188 IQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV-----PLQL 262 (465)
T ss_pred EEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCC-----ceEE
Confidence 12221223346777888888865443 344444 34578889999999666667999999999986632 2222
Q ss_pred C--CccEEEeCCCCcCC-CCCe--EEEEeeCCCCCCCCCCCCCcccchHhhh--hh------cCCCCCCCCCcHHHHHHH
Q 012104 233 E--YCHIVTTTTHKSLR-GPRA--GMIFYRKGPKPPKKGQPEGAVYDFEDKI--NF------AVFPSLQGGPHNHQIGAL 299 (471)
Q Consensus 233 ~--~aDiv~~s~~K~l~-Gprg--G~i~~~~~~~~~~~~~~~i~~~~l~~~i--~~------~~~~~~~g~p~~~~iaa~ 299 (471)
. +.|+.+-...|.+. |+.| |.++-.+..+...+.=-+++.-+..+++ +. .....-++.|..+..+|+
T Consensus 263 HdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al 342 (465)
T KOG3846|consen 263 HDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVAL 342 (465)
T ss_pred eecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHH
Confidence 2 67888888889863 4433 4444433221111100000000122211 11 111123467888888898
Q ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHcC-C-----------ceEeeCC---CCCeeEEEEccCCCCCHHHHHHHH
Q 012104 300 AVALKQASTPAFKAYAKQVKANAVALGNYLTGK-G-----------YSLVTGG---TENHLVLWDLRPLGLTGNKVEKLC 364 (471)
Q Consensus 300 a~al~~~~~~~~~~~~~~~~~na~~l~~~L~~~-g-----------~~i~~~~---~~~~~~~v~~~~~~~~~~~~~~~L 364 (471)
..+|+...+..+++.+++..-...+|..-++.. | +.++++. .....+.+.|.. +...+...|
T Consensus 343 ~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fss---p~~~vfqeL 419 (465)
T KOG3846|consen 343 RSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSS---PTPKVFQEL 419 (465)
T ss_pred HhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCC---CchHHHHHH
Confidence 888876655455666666666665555444332 3 2333321 011233344432 235678889
Q ss_pred hhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHH
Q 012104 365 DLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 418 (471)
Q Consensus 365 ~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~ 418 (471)
.++|+.+.+. .+++||+....+- .+-.|+.+...++.+++..
T Consensus 420 ~krGv~~DkR---------~PNvIRvAPvpLY---N~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 420 HKRGVIGDKR---------RPNVIRVAPVPLY---NTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred HHcCeecccc---------CCCceEeecchhh---ccHHHHHHHHHHHHHHHHH
Confidence 9999998663 4689999864321 2357899998888887654
No 390
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.77 E-value=0.00098 Score=62.27 Aligned_cols=338 Identities=15% Similarity=0.163 Sum_probs=177.3
Q ss_pred CCeeEecCCCCCcHHHHHHHhhhhhccCCCCC----CCCCCCCcchhHHHHHHHHHHHHHHhcCCCCCCCceeeecCChH
Q 012104 32 RGIELIASENFTSFAVIEALGSALTNKYSEGM----PGNRYYGGNEFIDEIENLCRSRALQTFHLDPTQWGVNVQPYSGS 107 (471)
Q Consensus 32 ~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~----~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~~~~~~v~~~sGt 107 (471)
..+++-|++--+|.+|+..+.+.+-|...-|. .+.| +.++...++ .+...+++|++.+... .+...-.+||
T Consensus 7 ~vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHR---sk~f~kii~-~tes~lreLlniPdn~-~vlf~QGGGt 81 (370)
T KOG2790|consen 7 RVVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHR---SKDFAKIIN-DTESLLRELLNIPDNY-KVLFLQGGGT 81 (370)
T ss_pred ceeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEeccc---chhHHHHHH-HHHHHHHHHHcCCCce-eEEEEeCCCc
Confidence 46788999999999999999888877655443 2334 334555554 3567788999998753 2444456777
Q ss_pred HHHHHHHHHhc--CCC---CEEEEeCCCCCCcccccccccCCccceeccce--eEEEeeeecCCC--CCCCHHHHHHHhh
Q 012104 108 PANFAAYTAVL--EPH---DRIMGLDLPSGGHLTHGYYTSGGKKISATSIY--FESLPYKVNSST--GYIDYDKLEEKAL 178 (471)
Q Consensus 108 ~A~~~~~~all--~pG---D~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~--~~~~~~~v~~~~--~~iD~~~le~~~~ 178 (471)
.-..++...|+ +.| |-|++-+ +|..+ ..-..++ ...+..+..+.+ ...|.+..+..
T Consensus 82 ~qFaAv~lNL~glK~g~~AdYiVTGs------WS~KA-------~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~~-- 146 (370)
T KOG2790|consen 82 GQFAAVPLNLIGLKHGRCADYVVTGS------WSAKA-------AEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWELN-- 146 (370)
T ss_pred ccccccchhhhccccCCccceEEecc------ccHHH-------HHHHHhhCCceEEeccccccccCcCCChhhcccC--
Confidence 65555555554 555 4444322 21111 0111111 111111111112 23454443321
Q ss_pred hCCCcEEE-Ec-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCcCCCCCe-EEEE
Q 012104 179 DFRPKLII-CG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKSLRGPRA-GMIF 255 (471)
Q Consensus 179 ~~~pklIi-~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~l~Gprg-G~i~ 255 (471)
.+-+.++ |. .+..|..+|.-. +-.-.|+++++|.+. .+.. .|..+...+++....+|++ ||-| -+++
T Consensus 147 -~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSS--nflS---rpvDvsk~gvi~aGAQKN~-G~aG~Tvvi 216 (370)
T KOG2790|consen 147 -PDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSS--NFLS---RPVDVSKFGVIFAGAQKNV-GPAGVTVVI 216 (370)
T ss_pred -CCccEEEEecCceeeceecCCCC---CCCCCCceEEEeccc--chhc---CCccchhcceEEecccccc-CccccEEEE
Confidence 1223554 43 333454332211 123469999999964 3332 2223334568889999996 7766 5666
Q ss_pred eeCCCCCCCC-CCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHHHHHHcC-
Q 012104 256 YRKGPKPPKK-GQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTP-AFKAYAKQVKANAVALGNYLTGK- 332 (471)
Q Consensus 256 ~~~~~~~~~~-~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~-~~~~~~~~~~~na~~l~~~L~~~- 332 (471)
.++++..... -.+.+.+|... .+. .....+|....+-.+...|+.+++. +.....+...+.++.|.+.+.+.
T Consensus 217 vr~dllg~~~~~tP~v~dyk~~--~~N---nSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 217 VRKDLLGNALDITPSVLDYKIM--DKN---NSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred EehhhhcccccCCccccceeee--ccc---cccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6775432211 12222222211 111 1122345444444555556666543 45667777788899999999876
Q ss_pred CceEee-CCCC-C-eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHH
Q 012104 333 GYSLVT-GGTE-N-HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIG 409 (471)
Q Consensus 333 g~~i~~-~~~~-~-~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~ 409 (471)
||-... .+.. + .-+.+.+.+.++..+.+.+..++ +..--++ +. .-+|||-|. ++. ++-++.++++
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKG----hR---SVGGiRASl--YNA--isv~~~q~L~ 359 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKDELEAEFLKEAAKE-HMVQLKG----HR---SVGGIRASL--YNA--ISVEEVQKLA 359 (370)
T ss_pred CeEEcccchhhhhhcccceeecchHHHHHHHHHHHHh-hhhcccc----cc---ccccchhhh--hcc--ccHHHHHHHH
Confidence 765422 1111 1 11233444434433333444443 3433232 21 247999987 332 4578999999
Q ss_pred HHHHHHH
Q 012104 410 EFLHRAV 416 (471)
Q Consensus 410 ~~i~~~l 416 (471)
+++.+-.
T Consensus 360 ~~m~~F~ 366 (370)
T KOG2790|consen 360 AFMKEFQ 366 (370)
T ss_pred HHHHHHH
Confidence 9987644
No 391
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.75 E-value=0.00014 Score=70.08 Aligned_cols=278 Identities=15% Similarity=0.116 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHhcC-CCCCCCceeeecCCh-HHHHHHHHHHhcCC----C--CEEEEeCCCCCCcccccccccCCccc
Q 012104 76 DEIENLCRSRALQTFH-LDPTQWGVNVQPYSG-SPANFAAYTAVLEP----H--DRIMGLDLPSGGHLTHGYYTSGGKKI 147 (471)
Q Consensus 76 ~~lE~~~~~~~~~lfg-~~~~~~~~~v~~~sG-t~A~~~~~~all~p----G--D~Vl~~~~~~~g~~s~~~~~~~g~~~ 147 (471)
.++|+.+ +++-++.| +..+. -.|.+.+| ||.+++++.||..+ + -.|+...|-|..+....-
T Consensus 46 ~eL~~~I-r~LH~~VGNAvt~g--r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~-------- 114 (363)
T PF04864_consen 46 PELERQI-RRLHRVVGNAVTDG--RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTD-------- 114 (363)
T ss_dssp HHHHHHH-HHHHHHH-SB--TT--SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCC--------
T ss_pred HHHHHHH-HHHHHHhccccccC--cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHH--------
Confidence 4666543 44555555 32221 12444555 57888888888422 2 367777777765532110
Q ss_pred eeccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEE--EEc-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhc
Q 012104 148 SATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLI--ICG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVA 224 (471)
Q Consensus 148 ~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklI--i~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~ 224 (471)
-+.+..|+ +.-|...+. +- ......| +++ +||-|..- ..+.+.-+..+|.|-||.=-
T Consensus 115 ~f~s~~y~---w~Gda~~~~-~~--------~~~~~~IElVTSPNNPDG~lr-----~~V~~g~~~k~I~D~AYYWP--- 174 (363)
T PF04864_consen 115 FFDSRLYK---WAGDASNFK-NS--------DNPSPYIELVTSPNNPDGQLR-----EAVLNGSSGKVIHDLAYYWP--- 174 (363)
T ss_dssp CT-BTTEE---EEEECCCGT-T---------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-ST---
T ss_pred hccccCcc---ccccHHhhc-cC--------CCCCCeEEEEeCCCCCccccc-----chhcCCCCcceeeeeeeecc---
Confidence 01122222 222322221 10 0112233 345 56666431 12345556778999987411
Q ss_pred cccCCCCCC---CccEEEeCCCCc--CCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHH
Q 012104 225 AQEAANPFE---YCHIVTTTTHKS--LRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGAL 299 (471)
Q Consensus 225 ~g~~~~p~~---~aDiv~~s~~K~--l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~ 299 (471)
+-.|+. .-||..||++|. =.|-|-||.+.+++ +..+++...+.-...|-..-.++-++
T Consensus 175 ---hyTpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~--------------~Va~kM~~y~~lnTiGvS~dsQLRa~ 237 (363)
T PF04864_consen 175 ---HYTPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE--------------EVAKKMTKYMELNTIGVSRDSQLRAL 237 (363)
T ss_dssp ---TTS---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H--------------HHHHHHHHHHHHHCSS--HHHHHHHH
T ss_pred ---cccccCCCCCCceEEEEEecccCccccccceeeecCH--------------HHHHHHHHHHHHhcccCcHHHHHHHH
Confidence 112333 347999999996 24567899999985 56665544332222232222222222
Q ss_pred HHHHHHhc----cH----HHHHHH-HHHHHHHHHHHHHHHcC-CceEee--C----------CCCCeeEEEEccCCCCCH
Q 012104 300 AVALKQAS----TP----AFKAYA-KQVKANAVALGNYLTGK-GYSLVT--G----------GTENHLVLWDLRPLGLTG 357 (471)
Q Consensus 300 a~al~~~~----~~----~~~~~~-~~~~~na~~l~~~L~~~-g~~i~~--~----------~~~~~~~~v~~~~~~~~~ 357 (471)
- -|+.+. .+ .+-.+. +.+.++-+.|++.+... -|.+.. + .....+.|+.+..++ .
T Consensus 238 k-iLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee--d 314 (363)
T PF04864_consen 238 K-ILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE--D 314 (363)
T ss_dssp H-HHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG--G
T ss_pred H-HHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc--c
Confidence 1 122211 11 122222 33445566777777654 244421 0 012336798886543 2
Q ss_pred HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHH
Q 012104 358 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 358 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~ 414 (471)
.++...|+++||..+.|..+|. .+.++||+. +- .+++++.+.+.|..
T Consensus 315 ~DC~~~l~~~~I~tr~G~~fga----~~ryVRlSm--l~----~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 315 EDCYAVLREAKIITRSGVLFGA----DSRYVRLSM--LK----RDDDFDQLLERLSK 361 (363)
T ss_dssp SSHHHHHHCTTEEEEEGGGGTS-----TTEEEEES--SS-----HHHHHHHHHHHHC
T ss_pred ccHHHHHHhCCcccCCCCccCC----CCCeEEEec--cC----CHHHHHHHHHHHHh
Confidence 5688999999999999987774 357999997 43 37899999887754
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.62 E-value=0.0017 Score=67.11 Aligned_cols=286 Identities=14% Similarity=0.108 Sum_probs=152.1
Q ss_pred HHHHHHhcCCCCCCCceeeecCChHHHHHHHHHHh-cCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeee
Q 012104 83 RSRALQTFHLDPTQWGVNVQPYSGSPANFAAYTAV-LEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKV 161 (471)
Q Consensus 83 ~~~~~~lfg~~~~~~~~~v~~~sGt~A~~~~~~al-l~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v 161 (471)
+..++++.|++-+. +.+ .--||.|-.++..+. ...+.+.++.+..|+-.++.- +....+.+.+ +
T Consensus 169 QTmi~dlTGL~~aN--ASL-LDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~-------~TRa~~~~i~-----v 233 (1001)
T KOG2040|consen 169 QTMITDLTGLPMAN--ASL-LDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVV-------KTRAKGFGIK-----V 233 (1001)
T ss_pred HHhhhhccCCcccc--hhh-hccchhHHHHHHHHHhhcccceEEecCCCCcchhhhh-------hcccccccee-----E
Confidence 34466777776531 111 234777766666655 566777888887776554311 0011121111 1
Q ss_pred cCCCCCCCHHHHHHHhhhCCCcEEEEc-CCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCC-CccEEE
Q 012104 162 NSSTGYIDYDKLEEKALDFRPKLIICG-GSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFE-YCHIVT 239 (471)
Q Consensus 162 ~~~~~~iD~~~le~~~~~~~pklIi~~-~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~-~aDiv~ 239 (471)
+ ..|+.+...-.+ ...-|++- +...|.+.|+.++++.|++.|..+++-. .|.+--....|-+ ++||++
T Consensus 234 ~----~~~~~~~~~s~~--~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~at----DLLaLtiLrpPgefGaDIav 303 (1001)
T KOG2040|consen 234 V----VSDIKEADYSSK--DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMAT----DLLALTILRPPGEFGADIAV 303 (1001)
T ss_pred E----ecCHHHhhcccc--ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEee----hhhHHHccCChhhcCceeee
Confidence 1 233333322221 22223333 5667999999999999999998876532 3433333344555 899999
Q ss_pred eCCCCc-----CCCCCeEEEEeeCCCCCCCC----------CCCCCcccchH-----hhhhhcCCCCCCCCCcHHHHHHH
Q 012104 240 TTTHKS-----LRGPRAGMIFYRKGPKPPKK----------GQPEGAVYDFE-----DKINFAVFPSLQGGPHNHQIGAL 299 (471)
Q Consensus 240 ~s~~K~-----l~GprgG~i~~~~~~~~~~~----------~~~~i~~~~l~-----~~i~~~~~~~~~g~p~~~~iaa~ 299 (471)
+|.+.. ..||..||+.+.+.+...-+ .|+.. |.++ +-|++-.-....++. ...+|-+
T Consensus 304 GSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a--~RLALQTREQHIrRDKATSNICTA-QALLANm 380 (1001)
T KOG2040|consen 304 GSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEA--YRLALQTREQHIRRDKATSNICTA-QALLANM 380 (1001)
T ss_pred ccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHH--HHHHHHHHHHHhhhhccchhhhHH-HHHHHHH
Confidence 999986 35777788777654321111 12111 1111 112211111100110 0011111
Q ss_pred HHHHH-HhccHHHHHHHHHHHHHHHHHHHHHHcCCceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCC
Q 012104 300 AVALK-QASTPAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG 378 (471)
Q Consensus 300 a~al~-~~~~~~~~~~~~~~~~na~~l~~~L~~~g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~ 378 (471)
++.+. +....+++++.+++....-.|...|+..|.+++.. .++=.+.+.- +-+.+++.....+.+|-++.-
T Consensus 381 aAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k---~fFDTLkI~~-~~s~~~~l~rA~~~~iNlr~~---- 452 (1001)
T KOG2040|consen 381 AAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHK---PFFDTLKIRC-GCSAEEVLDRAAKRQINLRLV---- 452 (1001)
T ss_pred HHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccc---cccceEEEEe-cCcHHHHHHHHHhhcCceEEe----
Confidence 11111 22345788999999999999999999888777522 2222222222 225677755555556655431
Q ss_pred CCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHH
Q 012104 379 DSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLH 413 (471)
Q Consensus 379 ~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~ 413 (471)
..+.|-+++-.- .+++|++.+...+.
T Consensus 453 -----ed~tigvslDET----v~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 -----EDGTIGVSLDET----VTEKDVDDLLWVFN 478 (1001)
T ss_pred -----ecCceEEeeccc----ccHHHHHHHHHHHc
Confidence 124566665433 34789998888775
No 393
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.56 E-value=0.0028 Score=61.14 Aligned_cols=207 Identities=16% Similarity=0.258 Sum_probs=115.4
Q ss_pred CHHHHHHHhhhCC----Cc-EEEEc--CC----CCCccccHHHHHHHHHHhCCEEEEeccccchhhccccC----CCCCC
Q 012104 169 DYDKLEEKALDFR----PK-LIICG--GS----AYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEA----ANPFE 233 (471)
Q Consensus 169 D~~~le~~~~~~~----pk-lIi~~--~s----~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~----~~p~~ 233 (471)
-++++|++|.+++ |- .||+. +| +++...=+..+++||++||+.+|+|+.|. |--+.|.+ ...++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT-GgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT-GGGATGKFWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec-CCCccCceeeehhcCCC
Confidence 3677888887654 32 23332 22 33333346899999999999999999997 43333321 12233
Q ss_pred -CccEEEeCCCCcCCCCCeEEEEeeCCCCCCCCCCCCCcccchHhhhhhcCCCCCCCCCcHHHHHHHHHHHHHhccHHHH
Q 012104 234 -YCHIVTTTTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPSLQGGPHNHQIGALAVALKQASTPAFK 312 (471)
Q Consensus 234 -~aDiv~~s~~K~l~GprgG~i~~~~~~~~~~~~~~~i~~~~l~~~i~~~~~~~~~g~p~~~~iaa~a~al~~~~~~~~~ 312 (471)
-.|+||+| |-|. .||+ +...+ ++..-....|....|.|.-..+... .++++.. +
T Consensus 333 ~PpD~vTFS--KK~q--~gGf-fh~~~---------------frpn~pYrifNTWmGdP~k~lll~~--vv~~I~~---~ 387 (484)
T KOG1405|consen 333 SPPDVVTFS--KKFQ--TGGF-FHDEE---------------FRPNEPYRIFNTWMGDPSKNLLLEE--VVQEIKR---E 387 (484)
T ss_pred CCccceehh--hhhh--cCcc-ccCcc---------------cCCCchHHHhhhhcCChHHHHHHHH--HHHHHhH---H
Confidence 46898876 5542 2453 33332 2211112234455577765544333 3444433 3
Q ss_pred HHHHHHHHHHHHHHHHHHcC-----C-ceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCCCCCCCC
Q 012104 313 AYAKQVKANAVALGNYLTGK-----G-YSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPG 386 (471)
Q Consensus 313 ~~~~~~~~na~~l~~~L~~~-----g-~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~ 386 (471)
....++...-+.|...|.++ | +.-+ .|.++ ++-+|+.... -.+.+...++..|+.+... | ..
T Consensus 388 ~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~-RGrGT-F~a~d~ps~~-~Rdk~i~~~~~nGv~~GGC---g------~~ 455 (484)
T KOG1405|consen 388 DLLNNVAHVGKALLKGLLELQAKYPGKINNL-RGRGT-FIAWDCPSGS-IRDKLILIARLNGVNLGGC---G------DK 455 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchhhhcc-cccce-EEEEeCCChH-HHHHHHHHHHHcCceeccc---c------cc
Confidence 45555555556666666543 1 2222 23444 4566876432 2456778888889988542 2 24
Q ss_pred eeEEecCCCCCcCCCHHHHHHHHHHHHHHHH
Q 012104 387 GVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 417 (471)
Q Consensus 387 ~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~ 417 (471)
.||+-.+-+ +.+...+.+.+.+.+++.
T Consensus 456 siRfRPsLv----f~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 456 SIRFRPSLV----FRKHHADIFLDIFDKILA 482 (484)
T ss_pred eeeecccee----ehhhhHHHHHHHHHHHhc
Confidence 677754222 457777777887777654
No 394
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.70 E-value=0.0056 Score=53.40 Aligned_cols=56 Identities=9% Similarity=-0.003 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHhcC--CCCCCCceeeecCCh-HHHHHHHHHHhcCCCCEEEEeCCCCCC
Q 012104 76 DEIENLCRSRALQTFH--LDPTQWGVNVQPYSG-SPANFAAYTAVLEPHDRIMGLDLPSGG 133 (471)
Q Consensus 76 ~~lE~~~~~~~~~lfg--~~~~~~~~~v~~~sG-t~A~~~~~~all~pGD~Vl~~~~~~~g 133 (471)
..+.+...+++.+.+| .+.+. -+|+.++| ++|+..++.++++|||.|++++|.|+|
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~p--d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDA--DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccch--hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 3454555677888877 32211 13444555 579999999999999999999998864
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.66 E-value=0.039 Score=51.29 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=63.6
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCC----Cccc-cHHHHHHHHHHhCCEEEEeccccch------hhccccCCCCCCC
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAY----PRDW-DYARFRAVADKCGALLLCDMAHISG------LVAAQEAANPFEY 234 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~----g~~~-d~~~i~~ia~~~g~~livD~a~~~g------lv~~g~~~~p~~~ 234 (471)
-.-|++.+++.+++..+..|+|-++.+ ++.. .+++|+.||..|+++-++..+|+.- .++.+ .....
T Consensus 139 l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~---~~~gr 215 (432)
T KOG3843|consen 139 LITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAA---AECGR 215 (432)
T ss_pred HHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHH---hhhcc
Confidence 456999999999887888776543322 3443 4799999999999999999998421 11111 11235
Q ss_pred ccEEEeCCCCcCCCCCeEEEEe
Q 012104 235 CHIVTTTTHKSLRGPRAGMIFY 256 (471)
Q Consensus 235 aDiv~~s~~K~l~GprgG~i~~ 256 (471)
.|.++-|+-|.+.-|-||.|+.
T Consensus 216 ida~vqsldknf~vpvggaiia 237 (432)
T KOG3843|consen 216 IDAFVQSLDKNFMVPVGGAIIA 237 (432)
T ss_pred HHHHHHHhhhcceeecchhHhh
Confidence 6888999999998998887765
No 396
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=80.67 E-value=20 Score=36.85 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHhhh-----CCCcEEE--EcCCCCCccccHHHHHHHHHHhC-CEEEEeccccchhhccccCCCCCC----
Q 012104 166 GYIDYDKLEEKALD-----FRPKLII--CGGSAYPRDWDYARFRAVADKCG-ALLLCDMAHISGLVAAQEAANPFE---- 233 (471)
Q Consensus 166 ~~iD~~~le~~~~~-----~~pklIi--~~~s~~g~~~d~~~i~~ia~~~g-~~livD~a~~~glv~~g~~~~p~~---- 233 (471)
|+||...+++.+++ .+|-+++ ++.+-.|..-.+-+|.+||+++. .|++.-+--.+.+++.. ..+.+.
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~ae-pnnil~HV~e 350 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCAE-PNNILGHVEE 350 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeecC-cccchhHHHH
Confidence 68999999998864 2444444 34677788777899999999987 88887654333444331 111222
Q ss_pred CccEEEeCCCCcCCCCCeEEEEeeCCC
Q 012104 234 YCHIVTTTTHKSLRGPRAGMIFYRKGP 260 (471)
Q Consensus 234 ~aDiv~~s~~K~l~GprgG~i~~~~~~ 260 (471)
..|-++-..--||.-|..-+++..+++
T Consensus 351 qldSMal~ialWLGiPSaPiV~LHRPl 377 (838)
T KOG0630|consen 351 QLDSMALNIALWLGIPSAPIVLLHRPL 377 (838)
T ss_pred HHhhccchhHHHhCCCCCceEEeeccc
Confidence 245555555567755655556555543
No 397
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=66.39 E-value=16 Score=30.66 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=41.5
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGA 210 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~ 210 (471)
..+|+++.++++ ..++++-+.+.+++|.+|.++.-.+.....++++.+..++.|.
T Consensus 25 ~~GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 25 EAGFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred HCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 455788877654 5688888888888999998876555566678888888887654
No 398
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=63.59 E-value=27 Score=29.72 Aligned_cols=53 Identities=13% Similarity=0.139 Sum_probs=38.8
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHh
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC 208 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~ 208 (471)
..+++++.++. .+.++++.+.+.+++|++|.++...+......+++.+..++.
T Consensus 29 ~~G~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 29 EAGFEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred HCCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 45578887754 367889999998899999988865555555667777666665
No 399
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=62.37 E-value=22 Score=28.79 Aligned_cols=49 Identities=18% Similarity=0.068 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEe
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD 215 (471)
..++++++++.+. .+|.+|+++.-.+|+.--.++-++.+++.++-+++-
T Consensus 47 Hkl~~eEle~~le-e~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLE-EGPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHh-cCCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 5799999999987 589999988777888766678889999988777654
No 400
>PRK09375 quinolinate synthetase; Provisional
Probab=61.04 E-value=61 Score=31.88 Aligned_cols=110 Identities=17% Similarity=0.215 Sum_probs=60.8
Q ss_pred ChHHHHHHHHHHHhccCCeeEecCCCCCcHHHHHHHhhhhhccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHhcCCCCC
Q 012104 16 DPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEFIDEIENLCRSRALQTFHLDPT 95 (471)
Q Consensus 16 d~~~~~~~~~e~~~~~~~i~li~s~n~~s~~v~~a~~~~l~~~~~~g~~~~r~~~g~~~~~~lE~~~~~~~~~lfg~~~~ 95 (471)
+.++.+-|. +++++++-+ |-.-+|..|+|.+.. .+. | |.++ +++ .+++ ..++
T Consensus 18 ~~~~~~~I~-~lk~e~~a~--ILaH~Yq~~eiq~~A-D~~---------G----------DSl~-Ls~-~A~~-~~a~-- 69 (319)
T PRK09375 18 KADLKERIK-RLKKERNAV--ILAHYYQRPEIQDLA-DFT---------G----------DSLE-LAR-FAAE-TDAD-- 69 (319)
T ss_pred hHHHHHHHH-HHHHhcCcE--EEEecCCCHHHHHHH-Hhh---------c----------cHHH-HHH-HHHh-CCCC--
Confidence 345555555 345666554 448899999995543 221 1 2344 332 2222 2433
Q ss_pred CCceeeecCChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHH
Q 012104 96 QWGVNVQPYSGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEE 175 (471)
Q Consensus 96 ~~~~~v~~~sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~ 175 (471)
+.|+.+---.|-.+ .+|+|+.+|+.+++.-|+-+ . ..++.+++++
T Consensus 70 ---~IvfcGV~FMaEtA---kIL~p~k~VllP~~~AgC~m--------------A---------------d~~~~~~i~~ 114 (319)
T PRK09375 70 ---TIVFCGVHFMAETA---KILSPEKTVLLPDLEAGCSL--------------A---------------DMCPAEEFRA 114 (319)
T ss_pred ---EEEEecceehhhhH---HhcCCCCeEECCCCCCCCcc--------------c---------------ccCCHHHHHH
Confidence 34443222233333 45779999999887544311 1 2578899998
Q ss_pred HhhhCCCcEEEEcC
Q 012104 176 KALDFRPKLIICGG 189 (471)
Q Consensus 176 ~~~~~~pklIi~~~ 189 (471)
+-++ +|..+++.+
T Consensus 115 lk~~-~p~a~vVaY 127 (319)
T PRK09375 115 FKEA-HPDATVVTY 127 (319)
T ss_pred HHHH-CCCCEEEEE
Confidence 7765 577665553
No 401
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=60.90 E-value=22 Score=30.14 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=40.9
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGA 210 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~ 210 (471)
..+|+++.++++ ..++++-+.+.+++|.+|.++.-.+.....++++.+.+++.|.
T Consensus 27 ~~GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 27 NAGFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 456788877654 5788888888888999998775444555567888888887763
No 402
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=60.31 E-value=31 Score=28.18 Aligned_cols=53 Identities=13% Similarity=-0.006 Sum_probs=36.9
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g 209 (471)
.+++++.++ ....++++.+.+.+.+|++|.++.+.+....+..++.+.+++.+
T Consensus 26 ~G~~V~~lg-----~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 26 AGFEVIDLG-----VDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCCEEEECC-----CCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 345665543 24668888888888899999887665555566777777777763
No 403
>COG2877 KdsA 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [Cell envelope biogenesis, outer membrane]
Probab=56.74 E-value=23 Score=32.93 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=31.6
Q ss_pred hCCCcEEEEc-CCCCCccccHHHHH--HHHHHhCCEEEEeccccc
Q 012104 179 DFRPKLIICG-GSAYPRDWDYARFR--AVADKCGALLLCDMAHIS 220 (471)
Q Consensus 179 ~~~pklIi~~-~s~~g~~~d~~~i~--~ia~~~g~~livD~a~~~ 220 (471)
.-++++++|. .+++|+..=+-.++ .|-++.|+++|.|.+|+.
T Consensus 157 ~gn~~v~lcERG~sFGYnnLV~DMrsl~iM~~~~~PViFDaTHSv 201 (279)
T COG2877 157 TGNNKVILCERGASFGYNNLVVDMRSLPIMKEFGAPVIFDATHSV 201 (279)
T ss_pred cCCCcEEEEeccCccCcchhHHHhhhhHHHHHcCCCeEEecccce
Confidence 3468899987 67777665444444 477899999999999974
No 404
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=56.21 E-value=47 Score=29.93 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=45.6
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCCCc
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTHKS 245 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~K~ 245 (471)
...++++++++.. ...+|.+..+.-.+..+++++.+-.|+.+.+++.|.+-.-.... ... -++|++.++++=.
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~~----A~~-~G~D~I~TTLsGY 123 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAIN----AAE-LGFDIIGTTLSGY 123 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHHH----HHH-TT-SEEE-TTTTS
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHHH----HHH-cCCCEEEcccccC
Confidence 3568888888864 78888888666666688999888788888999999875322111 011 1689999886654
No 405
>PLN02672 methionine S-methyltransferase
Probab=55.13 E-value=1.4e+02 Score=34.57 Aligned_cols=87 Identities=14% Similarity=0.252 Sum_probs=53.2
Q ss_pred HHHHHHhhhCCCcEEEEcCCCCCcc--ccHHHHHHHHHHhCCEEEEeccccchhhccccC--------CCCCC-CccEEE
Q 012104 171 DKLEEKALDFRPKLIICGGSAYPRD--WDYARFRAVADKCGALLLCDMAHISGLVAAQEA--------ANPFE-YCHIVT 239 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~~g~~--~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~--------~~p~~-~aDiv~ 239 (471)
+.+.+++++.+|++|+++--.+-+. --++.|.+.+++.|++++.|++-...+...... -.|++ ++ .++
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 595 (1082)
T PLN02672 517 DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHA-AII 595 (1082)
T ss_pred hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcch-hHh
Confidence 3677888889999999873332211 236788889999999999999865444322110 12222 22 344
Q ss_pred eCCCCc--CCCCCeEEEEeeC
Q 012104 240 TTTHKS--LRGPRAGMIFYRK 258 (471)
Q Consensus 240 ~s~~K~--l~GprgG~i~~~~ 258 (471)
+++-|. .+-...++++.-+
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~ 616 (1082)
T PLN02672 596 CGLVKNQVYSDLEVAFVISEN 616 (1082)
T ss_pred hhhhhccccccceEEEEecCc
Confidence 455555 4555667766543
No 406
>KOG4759 consensus Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=55.11 E-value=1.8e+02 Score=27.50 Aligned_cols=87 Identities=16% Similarity=0.228 Sum_probs=49.5
Q ss_pred CHHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH----HHHhhhh-h
Q 012104 356 TGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI----QKEYGKL-L 430 (471)
Q Consensus 356 ~~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~----~~~~~~~-~ 430 (471)
+-.++.++.++.|.-++|+ .....||++.|.+|+ +--+.++..+.+.....+.. ..++-++ -
T Consensus 154 ~ikai~kAI~~S~lnltP~--------~dg~~l~vsiP~~T~-----E~Re~laK~~~~~~ee~K~slr~ir~~~~kk~~ 220 (263)
T KOG4759|consen 154 DIKAILKAIEASGLNLTPN--------LDGTVLRVSIPPVTK-----ESREKLAKVLKRYFEEYKQSLRKIRTKSIKKSK 220 (263)
T ss_pred HHHHHHHHHHhCCCCCCcC--------CCCcEEEecCCCcCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677777777777664 234679999998875 55566666666655554422 1111111 1
Q ss_pred hhhhccCCChHHHHHHHHHHHHHHhcC
Q 012104 431 KDFNKGLVNNKDIEALKADVEKFASSF 457 (471)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~v~~~~~~~ 457 (471)
+.+.. ..+.++..+++++.++...|
T Consensus 221 k~~~~--~~~D~vkkae~~l~~l~k~~ 245 (263)
T KOG4759|consen 221 KNKKS--LSEDEVKKAEAELQKLAKDA 245 (263)
T ss_pred hcccc--CChhHHHHHHHHHHHHHHHH
Confidence 11111 23345677788888777654
No 407
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=54.03 E-value=38 Score=34.01 Aligned_cols=58 Identities=16% Similarity=0.259 Sum_probs=42.4
Q ss_pred CCCC-CCHHHHHHHhhh----CCCcEEEEc--CCCCC----ccccHHHHHHHHHHhCCEEEEeccccch
Q 012104 164 STGY-IDYDKLEEKALD----FRPKLIICG--GSAYP----RDWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 164 ~~~~-iD~~~le~~~~~----~~pklIi~~--~s~~g----~~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
.+|. .++++++.++.. .++++++|. .+.|+ ...|+..|..+.+.+++++++|..|+.|
T Consensus 231 k~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 231 KRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 3454 688888776642 346788874 34433 3368999998888899999999999866
No 408
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=53.97 E-value=42 Score=27.26 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=37.2
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHh--CCEEEEecccc
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC--GALLLCDMAHI 219 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~ 219 (471)
..+.+++.+.+.+.+|++|.++.+.........++.+..++. ++.+++=+.|.
T Consensus 37 ~~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 37 NVPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp SB-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 355699999888889999987754444444556666666665 78888877664
No 409
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=52.97 E-value=26 Score=33.39 Aligned_cols=57 Identities=16% Similarity=0.237 Sum_probs=41.1
Q ss_pred CCCC-CHHHHHHHhhh----CCCcEEEE--cCCCC-C---ccccHHHHHHHHHHhCCEEEEeccccch
Q 012104 165 TGYI-DYDKLEEKALD----FRPKLIIC--GGSAY-P---RDWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 165 ~~~i-D~~~le~~~~~----~~pklIi~--~~s~~-g---~~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
++.. ++++++.++.. .++++++| +.+.| + ...|+..|..+.+.++.+|+.|..|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 4444 78888776643 23567775 44455 4 3578899998888889999999999865
No 410
>TIGR00496 frr ribosome recycling factor. This model finds only eubacterial proteins. Mitochondrial and/or chloroplast forms might be expected but are not currently known. This protein was previously called ribosome releasing factor. By releasing ribosomes from mRNA at the end of protein biosynthesis, it prevents inappropriate translation from 3-prime regions of the mRNA and frees the ribosome for new rounds of translation. EGAD|53116|YHR038W is part of the frr superfamily.
Probab=52.87 E-value=1.7e+02 Score=26.09 Aligned_cols=88 Identities=14% Similarity=0.304 Sum_probs=46.2
Q ss_pred HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH----HHHHHhhhhhhh
Q 012104 357 GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL----EIQKEYGKLLKD 432 (471)
Q Consensus 357 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~----~~~~~~~~~~~~ 432 (471)
...+.+++...|+-++|.. ....|||.+|.+|. +-=+.++..+....+..+ .+-..+.+.++.
T Consensus 66 ~~~I~kAI~~s~lglnP~~--------dg~~Iri~iP~lT~-----E~RkelvK~~k~~~E~aKv~iRniRr~~~~~iKk 132 (176)
T TIGR00496 66 INAIEKAIQRSDLGLNPNN--------DGSVIRVNFPPLTE-----ERRKELVKHAKKIAEQAKVAVRNVRRDANDKVKK 132 (176)
T ss_pred HHHHHHHHHHCCCCCCccc--------CCCEEEecCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888888888777631 23579999988763 333344444433333222 111222333433
Q ss_pred hhc-cCCChHHHHHHHHHHHHHHhcC
Q 012104 433 FNK-GLVNNKDIEALKADVEKFASSF 457 (471)
Q Consensus 433 ~~~-~~~~~~~~~~~~~~v~~~~~~~ 457 (471)
+.+ ...++.+...+.++|.+++..|
T Consensus 133 ~~k~~~iseD~~k~~~~~iQkltd~~ 158 (176)
T TIGR00496 133 LEKDKEISEDEERRLQEEIQKLTDEY 158 (176)
T ss_pred HhhcCCCChhHHHHHHHHHHHHHHHH
Confidence 321 1123344566667777766544
No 411
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=52.16 E-value=85 Score=27.85 Aligned_cols=65 Identities=12% Similarity=0.069 Sum_probs=42.6
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccccchhhccccCCC
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHISGLVAAQEAAN 230 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~ 230 (471)
..+.++.+.+++.+-+--+|++|.-......-.+++.+++++.+++++.=....-+++..|..+.
T Consensus 20 ~~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~~ 84 (171)
T PRK00945 20 KIVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDAK 84 (171)
T ss_pred cccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccCC
Confidence 45688888888875433356666322221234678999999999999876543446666666554
No 412
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=51.39 E-value=40 Score=32.96 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=39.1
Q ss_pred cCCCCCCCHHHHHHHhhhC-----CCcEEE-EcCCCCCcccc-HHHHHHHHHHhCCEEEEecccc
Q 012104 162 NSSTGYIDYDKLEEKALDF-----RPKLII-CGGSAYPRDWD-YARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 162 ~~~~~~iD~~~le~~~~~~-----~pklIi-~~~s~~g~~~d-~~~i~~ia~~~g~~livD~a~~ 219 (471)
+.....++.+++++.+... +-.+|+ +|.-|-|...| +.++.++|++.|+.+++|.+..
T Consensus 105 n~~Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 105 NFPGPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 3344577777777765432 124454 55556555544 6899999999999999998754
No 413
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=50.91 E-value=47 Score=30.13 Aligned_cols=62 Identities=10% Similarity=0.113 Sum_probs=45.7
Q ss_pred ccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC----CEEEEec
Q 012104 150 TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG----ALLLCDM 216 (471)
Q Consensus 150 ~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g----~~livD~ 216 (471)
...+++++.++.+ +.++++.+.+.+.+|++|.++.+.+.....++++.+..++.| +.+++=+
T Consensus 109 ~~~G~~vi~LG~~-----vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG 174 (197)
T TIGR02370 109 RANGFDVIDLGRD-----VPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGG 174 (197)
T ss_pred HhCCcEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 3456788877643 678999999999999999988766666667788888888764 4565533
No 414
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=50.28 E-value=19 Score=31.15 Aligned_cols=44 Identities=18% Similarity=0.315 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g 209 (471)
..-|.+.|.+.+.+++|.+|.++.++....--.+.+.++.++..
T Consensus 48 ~~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 48 KEEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp SHHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 34577888889999999999986443333233566777776654
No 415
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=50.22 E-value=56 Score=32.99 Aligned_cols=69 Identities=17% Similarity=0.052 Sum_probs=41.0
Q ss_pred eeccceeEEEeeeecCCCCCCCHHHHHHHhhh--CCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 148 SATSIYFESLPYKVNSSTGYIDYDKLEEKALD--FRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 148 ~~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~--~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
......-+.+.++..+.....+...|-+.+.. .+-+.++.+.-.=|...+.+.+.++|++.|.++++|-
T Consensus 108 Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 108 RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 33333345555443311122334444444432 2346777764445666678999999999999999995
No 416
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.09 E-value=52 Score=31.15 Aligned_cols=58 Identities=17% Similarity=0.302 Sum_probs=41.6
Q ss_pred CCC-CCCHHHHHHHhhh----CCCcEEEEc--CCCCC---c-cccHHHHHHHHHHhCCEEEEeccccch
Q 012104 164 STG-YIDYDKLEEKALD----FRPKLIICG--GSAYP---R-DWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 164 ~~~-~iD~~~le~~~~~----~~pklIi~~--~s~~g---~-~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
.++ ..++++++..+.. .++++++|. .+.|+ + ..|+..|..+.+..+.+|++|-+|+.|
T Consensus 128 k~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G 196 (250)
T PRK13397 128 KRGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCc
Confidence 345 6788887776543 346788864 33333 2 678888888888899999999999866
No 417
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=49.10 E-value=50 Score=29.99 Aligned_cols=61 Identities=8% Similarity=0.063 Sum_probs=43.3
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC----CEEEEec
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG----ALLLCDM 216 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g----~~livD~ 216 (471)
..+++++.++. .+.++++.+.+.+.+|++|.++.+.+......+++.+..++.+ +.+++=+
T Consensus 108 ~~G~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG 172 (201)
T cd02070 108 ANGFEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGG 172 (201)
T ss_pred HCCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEEC
Confidence 45577776653 3678999999988999999888666555566777777777653 4555543
No 418
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=48.93 E-value=48 Score=30.21 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=48.3
Q ss_pred CCHHHHHHHhhhCCCcEEEEcCCCCCccc-cHHHHHHHHHHhCCEEEEeccccc-hhhccccCCCCCC-CccEEEeCCCC
Q 012104 168 IDYDKLEEKALDFRPKLIICGGSAYPRDW-DYARFRAVADKCGALLLCDMAHIS-GLVAAQEAANPFE-YCHIVTTTTHK 244 (471)
Q Consensus 168 iD~~~le~~~~~~~pklIi~~~s~~g~~~-d~~~i~~ia~~~g~~livD~a~~~-glv~~g~~~~p~~-~aDiv~~s~~K 244 (471)
..++++++++.. ...+|.+..+--.|.. ++++|.+-.+..|.+++.|.+-.- |+. ... ++||+-+|++-
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee~l~-------a~~~G~D~IGTTLsG 157 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEEGLN-------AHKLGFDIIGTTLSG 157 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHHHHH-------HHHcCCcEEeccccc
Confidence 346777787764 5777777765555555 889998888888999999997531 111 112 68999888664
Q ss_pred c
Q 012104 245 S 245 (471)
Q Consensus 245 ~ 245 (471)
.
T Consensus 158 Y 158 (229)
T COG3010 158 Y 158 (229)
T ss_pred c
Confidence 3
No 419
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=48.56 E-value=38 Score=32.00 Aligned_cols=55 Identities=11% Similarity=0.250 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHh----hhCCCcEEEEc-CCCCCc---cccHHHHHHHHHHhCCEEEEeccccch
Q 012104 166 GYIDYDKLEEKA----LDFRPKLIICG-GSAYPR---DWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 166 ~~iD~~~le~~~----~~~~pklIi~~-~s~~g~---~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
....+++....+ ..-++++|+|. ...+++ +.|+..+.-+ ++.+.+|++|.+|+..
T Consensus 125 ~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsvq 187 (258)
T TIGR01362 125 QFLSPWDMKNVVEKVLSTGNKNILLCERGTSFGYNNLVVDMRSLPIM-RELGCPVIFDATHSVQ 187 (258)
T ss_pred CcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCcccc
Confidence 345666544333 33478899986 334444 5688777744 4569999999999743
No 420
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=46.96 E-value=64 Score=26.62 Aligned_cols=50 Identities=16% Similarity=0.028 Sum_probs=38.1
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEecc
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a 217 (471)
.++.+++++++.. +|.+|++|.-.+++...-+++.+..++.|+=+.+-..
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5899999999874 7999998866666644456677788889988877544
No 421
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=45.63 E-value=68 Score=26.45 Aligned_cols=52 Identities=10% Similarity=-0.044 Sum_probs=34.5
Q ss_pred ceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHh
Q 012104 152 IYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC 208 (471)
Q Consensus 152 ~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~ 208 (471)
.+++++..+. ...++++-+.+.+.+|++|.++.+........+++.+..++.
T Consensus 26 ~G~~vi~lG~-----~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 26 AGFEVIYTGL-----RQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CCCEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 4466666542 366788888888889999987755444444566766666665
No 422
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.14 E-value=48 Score=33.05 Aligned_cols=55 Identities=18% Similarity=0.214 Sum_probs=39.9
Q ss_pred CCHHHHHHHhhh----CCCcEEEEc--C---C-CCC-ccccHHHHHHHHHHhCCEEEEeccccchh
Q 012104 168 IDYDKLEEKALD----FRPKLIICG--G---S-AYP-RDWDYARFRAVADKCGALLLCDMAHISGL 222 (471)
Q Consensus 168 iD~~~le~~~~~----~~pklIi~~--~---s-~~g-~~~d~~~i~~ia~~~g~~livD~a~~~gl 222 (471)
.+++++...+.. .++++++|. . . .|+ ...|+..|..+.+..+.++++|.+|+.|.
T Consensus 219 ~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 219 ATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 377777766542 356788753 1 2 344 55789999988777899999999998764
No 423
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=45.07 E-value=61 Score=29.85 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=43.1
Q ss_pred ccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC--CEEEE
Q 012104 150 TSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG--ALLLC 214 (471)
Q Consensus 150 ~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g--~~liv 214 (471)
...+++++.++.+ +.++++.+.+.+.+|++|.++.+.+......+++.+..++.+ +.+++
T Consensus 113 ~~~G~~Vi~LG~~-----vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~v 174 (213)
T cd02069 113 SNNGYEVIDLGVM-----VPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLI 174 (213)
T ss_pred HhCCCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEE
Confidence 3456788887644 678999999999999999888665555566777777666654 44443
No 424
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=44.37 E-value=51 Score=31.24 Aligned_cols=45 Identities=16% Similarity=0.235 Sum_probs=36.4
Q ss_pred hhhCCCcEEEEc------CCCCCccccHHHHHHHHHHhCCEEEEeccccch
Q 012104 177 ALDFRPKLIICG------GSAYPRDWDYARFRAVADKCGALLLCDMAHISG 221 (471)
Q Consensus 177 ~~~~~pklIi~~------~s~~g~~~d~~~i~~ia~~~g~~livD~a~~~g 221 (471)
+..-++.+|+|- ...+-...|+..+.-+-+....++|+|-+|.+|
T Consensus 176 ~s~GN~~vILCERGIRtfe~~TRntLDi~aV~~~kq~THLPVivDpSH~~G 226 (286)
T COG2876 176 LSHGNGNVILCERGIRTFEKATRNTLDISAVPILKQETHLPVIVDPSHATG 226 (286)
T ss_pred HhCCCCcEEEEecccccccccccceechHHHHHHHhhcCCCEEECCCCccc
Confidence 344578999874 345677789999998888889999999999876
No 425
>PRK00083 frr ribosome recycling factor; Reviewed
Probab=44.13 E-value=2.4e+02 Score=25.34 Aligned_cols=87 Identities=11% Similarity=0.296 Sum_probs=46.0
Q ss_pred HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH----HHHHHhhhhhhhh
Q 012104 358 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL----EIQKEYGKLLKDF 433 (471)
Q Consensus 358 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~----~~~~~~~~~~~~~ 433 (471)
..+.+++...++-++|.. .+..|||.+|.+|. +--..++..+.......+ .+-....+.++.+
T Consensus 76 ~~I~kAI~~s~lgl~P~~--------dg~~Iri~iP~lT~-----E~R~elvK~~k~~~E~aKv~iRniRr~~~~~iKk~ 142 (185)
T PRK00083 76 KAIEKAIRASDLGLNPSN--------DGTVIRLPIPPLTE-----ERRKELVKQVKKEAEEAKVAIRNIRRDANDKLKKL 142 (185)
T ss_pred HHHHHHHHHCCCCCCccc--------CCCEEEecCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457888888888777642 23689999988763 333444444444333322 1112222333333
Q ss_pred h-ccCCChHHHHHHHHHHHHHHhcC
Q 012104 434 N-KGLVNNKDIEALKADVEKFASSF 457 (471)
Q Consensus 434 ~-~~~~~~~~~~~~~~~v~~~~~~~ 457 (471)
. +...++.+...+.++|.+++..|
T Consensus 143 ~k~~~iseD~~k~~e~eiQkltd~~ 167 (185)
T PRK00083 143 EKDKEISEDELKRAEDEIQKLTDKY 167 (185)
T ss_pred hhcCCCChHHHHHHHHHHHHHHHHH
Confidence 2 11123334566666777766544
No 426
>TIGR03586 PseI pseudaminic acid synthase.
Probab=43.85 E-value=51 Score=32.56 Aligned_cols=89 Identities=19% Similarity=0.288 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHhhh----CCCcEEEEc-CCCCC---ccccHHHHHHHHHHhCCEE-EEeccccchhhccccCCCCCC-C
Q 012104 165 TGYIDYDKLEEKALD----FRPKLIICG-GSAYP---RDWDYARFRAVADKCGALL-LCDMAHISGLVAAQEAANPFE-Y 234 (471)
Q Consensus 165 ~~~iD~~~le~~~~~----~~pklIi~~-~s~~g---~~~d~~~i~~ia~~~g~~l-ivD~a~~~glv~~g~~~~p~~-~ 234 (471)
+|.-++++++.++.- .+++++++. .+.|+ ...++..|..+.++++.+| ++| |..|.... .-.+. +
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~---~aAva~G 215 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP---VAAVALG 215 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH---HHHHHcC
Confidence 455678888776642 245777743 34444 3357888888889999999 888 77664210 00112 6
Q ss_pred ccEE--EeCCCCcCCCCCeEEEEeeC
Q 012104 235 CHIV--TTTTHKSLRGPRAGMIFYRK 258 (471)
Q Consensus 235 aDiv--~~s~~K~l~GprgG~i~~~~ 258 (471)
|+++ =++..|++.||..-.-+.++
T Consensus 216 A~iIEkH~tld~~l~G~D~~~Sl~p~ 241 (327)
T TIGR03586 216 ACVIEKHFTLDRSDGGVDSAFSLEPD 241 (327)
T ss_pred CCEEEeCCChhhcCCCCChhccCCHH
Confidence 6755 45667888888664444444
No 427
>cd06919 Asp_decarbox Aspartate alpha-decarboxylase or L-aspartate 1-decarboxylase, a pyruvoyl group-dependent decarboxylase in beta-alanine production. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme L-aspartate decarboxylase (ADC), EC:4.1.1.11 which requires a pyruvoyl group for its activity. The pyruvoyl cofactor is covalently bound to the enzyme. The protein is synthesized as a proenzyme and cleaved via self-processing at Gly23-Ser24 to yield an alpha chain (C-terminal fragment) and beta chain (N-terminal fragment), and the pyruvoyl group. Beta-alanine is required for the biosynthesis of pantothenate, in which the enzyme plays a critical regulatory role. The active site of the tetrameric enzyme is located at the interface of two subunits, with a Lysine and a Histidine from the beta chain of one subunit forming the active site with residues from the alpha chain of the adjacent subunit. This alignment
Probab=43.17 E-value=22 Score=28.80 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=10.4
Q ss_pred HHHHhcCCCCEEEEeC
Q 012104 113 AYTAVLEPHDRIMGLD 128 (471)
Q Consensus 113 ~~~all~pGD~Vl~~~ 128 (471)
+-.-+.+|||+|++++
T Consensus 73 AAAr~~~~GD~vII~s 88 (111)
T cd06919 73 AAARLGQPGDRVIIMA 88 (111)
T ss_pred HHHhcCCCCCEEEEEE
Confidence 3334567888887765
No 428
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=41.59 E-value=74 Score=26.83 Aligned_cols=54 Identities=13% Similarity=0.070 Sum_probs=36.0
Q ss_pred cceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC
Q 012104 151 SIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG 209 (471)
Q Consensus 151 g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g 209 (471)
..+|+++..++ ...++++-+.+.++++++|.++..........+++.+..++.|
T Consensus 28 ~~GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 28 DLGFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred hCCcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 35577776543 3567888777777899988876554444445677777666654
No 429
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=41.33 E-value=82 Score=30.39 Aligned_cols=63 Identities=22% Similarity=0.256 Sum_probs=40.2
Q ss_pred CCCHHHHHHHhhhCCCcEEEEc--CCC-CCcccc-----------HHHHHHHHHHhCCEEEEeccccchhhccccCCCCC
Q 012104 167 YIDYDKLEEKALDFRPKLIICG--GSA-YPRDWD-----------YARFRAVADKCGALLLCDMAHISGLVAAQEAANPF 232 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~--~s~-~g~~~d-----------~~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~ 232 (471)
..|++.+++.+++.+|++||.. .+. -....+ ...++++|+++|++++-=. ...++.|....|.
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiS---TDyVFDG~~~~~Y 112 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIS---TDYVFDGEKGGPY 112 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEee---cceEecCCCCCCC
Confidence 4688999999999999999833 111 111111 2467799999999987422 2456655544433
No 430
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=40.77 E-value=27 Score=28.95 Aligned_cols=20 Identities=10% Similarity=-0.041 Sum_probs=12.3
Q ss_pred HHHHHHHHhcCCCCEEEEeC
Q 012104 109 ANFAAYTAVLEPHDRIMGLD 128 (471)
Q Consensus 109 A~~~~~~all~pGD~Vl~~~ 128 (471)
.++.+-.-+.+|||+|++++
T Consensus 70 ~lNGAAArl~~~GD~VII~s 89 (126)
T TIGR00223 70 CVNGAAARCVSVGDIVIIAS 89 (126)
T ss_pred EeCCHHHhcCCCCCEEEEEE
Confidence 33333344667888888766
No 431
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=39.62 E-value=60 Score=30.80 Aligned_cols=54 Identities=17% Similarity=0.326 Sum_probs=35.1
Q ss_pred CCCCHHHHHHHh----hhCCCcEEEEc-CCCCCcc---ccHHHHHHHHHHhCCEEEEeccccc
Q 012104 166 GYIDYDKLEEKA----LDFRPKLIICG-GSAYPRD---WDYARFRAVADKCGALLLCDMAHIS 220 (471)
Q Consensus 166 ~~iD~~~le~~~----~~~~pklIi~~-~s~~g~~---~d~~~i~~ia~~~g~~livD~a~~~ 220 (471)
....+++....+ ..-++++|+|. .+.+++. .|+..+. +.++.+.+|++|.+|+.
T Consensus 133 ~~~t~~e~~~aaeyi~~~Gn~~vilcERG~tf~y~r~~~D~~~vp-~~k~~~lPVi~DpSHsv 194 (264)
T PRK05198 133 QFLAPWDMKNVVDKVREAGNDKIILCERGTSFGYNNLVVDMRGLP-IMRETGAPVIFDATHSV 194 (264)
T ss_pred CcCCHHHHHHHHHHHHHcCCCeEEEEeCCCCcCCCCeeechhhhH-HHhhCCCCEEEeCCccc
Confidence 345666544433 33468999986 3344433 5777666 45567899999999974
No 432
>PRK05449 aspartate alpha-decarboxylase; Provisional
Probab=39.49 E-value=28 Score=28.96 Aligned_cols=18 Identities=11% Similarity=0.036 Sum_probs=11.1
Q ss_pred HHHHHHhcCCCCEEEEeC
Q 012104 111 FAAYTAVLEPHDRIMGLD 128 (471)
Q Consensus 111 ~~~~~all~pGD~Vl~~~ 128 (471)
+.+-.-+.+|||+|++.+
T Consensus 72 NGAAAr~~~~GD~vII~a 89 (126)
T PRK05449 72 NGAAARLVQVGDLVIIAA 89 (126)
T ss_pred CCHHHhcCCCCCEEEEEE
Confidence 333334567888887765
No 433
>KOG0081 consensus GTPase Rab27, small G protein superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=39.12 E-value=56 Score=28.49 Aligned_cols=48 Identities=27% Similarity=0.346 Sum_probs=33.1
Q ss_pred HHHHHHhhhCCCcEEEEcCCC---CCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 171 DKLEEKALDFRPKLIICGGSA---YPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~---~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
.+|...+--++|.+|+|++-. .-+...-++.+++|+++|++.+.-.|.
T Consensus 114 SQL~~hAYcE~PDivlcGNK~DL~~~R~Vs~~qa~~La~kyglPYfETSA~ 164 (219)
T KOG0081|consen 114 SQLQTHAYCENPDIVLCGNKADLEDQRVVSEDQAAALADKYGLPYFETSAC 164 (219)
T ss_pred HHHHHhhccCCCCEEEEcCccchhhhhhhhHHHHHHHHHHhCCCeeeeccc
Confidence 334433334589999998432 345566677889999999998876653
No 434
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=38.80 E-value=33 Score=36.94 Aligned_cols=36 Identities=17% Similarity=0.117 Sum_probs=31.2
Q ss_pred EEEEcCCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 184 LIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 184 lIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
..+...|.||..-+++++.+-|++.|+-||+|-++.
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 334457789999999999999999999999999875
No 435
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=38.54 E-value=72 Score=24.39 Aligned_cols=45 Identities=16% Similarity=0.043 Sum_probs=31.7
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
.++..+.++..+.++|++..+.... -.+.+..+|++++++++.-.
T Consensus 16 ~~~v~kai~~gkaklViiA~D~~~~--~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRGSVKEVVVAEDADPR--LTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcCCeeEEEEECCCCHH--HHHHHHHHHHHcCCCEEEEC
Confidence 4566777777778888866443332 36788899999999876443
No 436
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=35.93 E-value=81 Score=30.29 Aligned_cols=53 Identities=13% Similarity=0.316 Sum_probs=35.6
Q ss_pred CCCCHHHHHHHhh----hCCCcEEEEc-CCCCCcc---ccHHHHHHHHHHhCCEEEEecccc
Q 012104 166 GYIDYDKLEEKAL----DFRPKLIICG-GSAYPRD---WDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 166 ~~iD~~~le~~~~----~~~pklIi~~-~s~~g~~---~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
...++++....+. .-++++++|. ...+|+. .|+..+..+ ++.+.+||+|.+|+
T Consensus 139 q~~t~~e~~~aaeki~~~GN~~viLcERG~tFgy~~lv~D~r~ip~m-k~~~lPVI~DpSHs 199 (290)
T PLN03033 139 QFCAPSVMRNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWM-REANCPVVADITHS 199 (290)
T ss_pred CCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCcCCCCcccchhhhHHH-HhcCCCEEEeCCcc
Confidence 4566666554443 3467899886 3344433 677777644 46899999999997
No 437
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=35.11 E-value=1e+02 Score=28.55 Aligned_cols=49 Identities=8% Similarity=0.093 Sum_probs=30.5
Q ss_pred CCCCHHHHHHHhh----hCCCcEEEEcCCC---CCc--ccc-------HHHHHHHHHHhCCEEEE
Q 012104 166 GYIDYDKLEEKAL----DFRPKLIICGGSA---YPR--DWD-------YARFRAVADKCGALLLC 214 (471)
Q Consensus 166 ~~iD~~~le~~~~----~~~pklIi~~~s~---~g~--~~d-------~~~i~~ia~~~g~~liv 214 (471)
..++++.|++.+. ++++++|++.+-. .+. .-. +..|+++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 3467777776654 3478888865211 111 111 35677899999998886
No 438
>COG0853 PanD Aspartate 1-decarboxylase [Coenzyme metabolism]
Probab=34.57 E-value=47 Score=27.43 Aligned_cols=18 Identities=11% Similarity=0.124 Sum_probs=12.1
Q ss_pred HHHHHHhcCCCCEEEEeC
Q 012104 111 FAAYTAVLEPHDRIMGLD 128 (471)
Q Consensus 111 ~~~~~all~pGD~Vl~~~ 128 (471)
..+..-++++||.|++++
T Consensus 71 NGAAArl~~~GD~VII~s 88 (126)
T COG0853 71 NGAAARLVQVGDLVIIMS 88 (126)
T ss_pred chHHHhhCCCCCEEEEEE
Confidence 333344678888888876
No 439
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=33.70 E-value=80 Score=24.90 Aligned_cols=52 Identities=15% Similarity=0.246 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCEEEEeccccchhhccccCCCCCCCccEEEeCCC--CcCC-CCCeEEEEee
Q 012104 199 ARFRAVADKCGALLLCDMAHISGLVAAQEAANPFEYCHIVTTTTH--KSLR-GPRAGMIFYR 257 (471)
Q Consensus 199 ~~i~~ia~~~g~~livD~a~~~glv~~g~~~~p~~~aDiv~~s~~--K~l~-GprgG~i~~~ 257 (471)
..+.++++++|+.+-+|..+. + ..+.-.+++|++++|.| ..+. .|. |.++.-
T Consensus 20 ~kve~~l~~~gi~~~~~~~~v-~-----~~~~~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~ 74 (93)
T COG3414 20 MKVEEVLKELGIDVDVEQCAV-D-----EIKALTDGADIIVTSTKLADEFEDIPK-GYVVIT 74 (93)
T ss_pred HHHHHHHHHcCCCceeeeEEe-c-----ccccCCCcccEEEEehHhhhhcCcCCC-ceEEEE
Confidence 477899999999844444333 2 22233347899998887 4463 344 555443
No 440
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=33.04 E-value=1.1e+02 Score=23.55 Aligned_cols=44 Identities=2% Similarity=-0.059 Sum_probs=30.8
Q ss_pred HHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
++..+.++..+.++|++..+... .-.+.|.+.|+.++++++...
T Consensus 14 ~~vlkaIk~gkakLViiA~Da~~--~~~k~i~~~c~~~~Vpv~~~~ 57 (82)
T PRK13601 14 KQTLKAITNCNVLQVYIAKDAEE--HVTKKIKELCEEKSIKIVYID 57 (82)
T ss_pred HHHHHHHHcCCeeEEEEeCCCCH--HHHHHHHHHHHhCCCCEEEeC
Confidence 45566677677888886543332 236788999999999986544
No 441
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=32.59 E-value=1.1e+02 Score=32.35 Aligned_cols=54 Identities=20% Similarity=0.208 Sum_probs=38.9
Q ss_pred CCCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHh--CCEEEEecccc
Q 012104 165 TGYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKC--GALLLCDMAHI 219 (471)
Q Consensus 165 ~~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~--g~~livD~a~~ 219 (471)
...++.+++.+.+.+.+|++|.++.. ++......++++++++. ++.+++=+.|.
T Consensus 47 ~~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 47 TGPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred ccCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 34577888888888889998876532 23333455777778876 99999887775
No 442
>PF01765 RRF: Ribosome recycling factor; InterPro: IPR023584 The ribosome recycling factor or ribosome release factor (RRF) dissociates ribosomes from mRNA after termination of translation, and is essential for bacterial growth []. Thus ribosomes are 'recycled' and ready for another round of protein synthesis. This entry represents a domain found in ribosome recycling factors.; PDB: 3R8N_Y 1Y69_8 1ISE_A 1EK8_A 1DD5_A 1WIH_A 2Z4L_6 2QBE_6 2V46_Y 1EH1_A ....
Probab=31.65 E-value=2.5e+02 Score=24.56 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=42.4
Q ss_pred HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH----HHHHHhhhhhhh
Q 012104 357 GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL----EIQKEYGKLLKD 432 (471)
Q Consensus 357 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~----~~~~~~~~~~~~ 432 (471)
-..+.+.+...++-+++.. .+..||+.+|.+|. +--++++..+.+..+... .+...+-+.++.
T Consensus 57 i~~I~kAI~~s~l~l~p~~--------d~~~i~v~iP~~T~-----E~R~~l~k~~k~~~E~~k~~iR~iR~~~~~~lkk 123 (165)
T PF01765_consen 57 IKAIEKAIQKSNLNLNPQN--------DGNTIRVPIPPPTE-----ERRKELVKQAKKIAEEAKVSIRNIRRDAMKKLKK 123 (165)
T ss_dssp HHHHHHHHHHTTSSSEEEE--------ETTEEEEE--SSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCccc--------CCcEEEEECCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567888888888776642 13689999988763 333333333333332222 111222233333
Q ss_pred hhcc-CCChHHHHHHHHHHHHHHhc
Q 012104 433 FNKG-LVNNKDIEALKADVEKFASS 456 (471)
Q Consensus 433 ~~~~-~~~~~~~~~~~~~v~~~~~~ 456 (471)
+.+. ..+..+...+.+++..+...
T Consensus 124 ~~~~~~~s~D~~~~~~~~iq~l~~~ 148 (165)
T PF01765_consen 124 LKKSKEISEDDIKKLEKEIQKLTDK 148 (165)
T ss_dssp HHHTTSS-HHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCchhhHHHHHHHHHHHHH
Confidence 3221 11333455666666666654
No 443
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=31.09 E-value=2.7e+02 Score=26.49 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=33.4
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEE
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~li 213 (471)
+.+|.+.+++.+++.++++|+--..||-..+. +-+.+.|++.|+..+
T Consensus 50 g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~is-~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 50 GALDPQELREFLKRHSIDILVDATHPFAAQIT-TNATAVCKELGIPYV 96 (256)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCCHHHHHHH-HHHHHHHHHhCCcEE
Confidence 46889999999988889988744555544321 234578988887765
No 444
>cd00520 RRF Ribosome recycling factor (RRF). Ribosome recycling factor dissociates the posttermination complex, composed of the ribosome, deacylated tRNA, and mRNA, after termination of translation. Thus ribosomes are "recycled" and ready for another round of protein synthesis. RRF is believed to bind the ribosome at the A-site in a manner that mimics tRNA, but the specific mechanisms remain unclear. RRF is essential for bacterial growth. It is not necessary for cell growth in archaea or eukaryotes, but is found in mitochondria or chloroplasts of some eukaryotic species.
Probab=30.78 E-value=3.9e+02 Score=23.81 Aligned_cols=87 Identities=14% Similarity=0.290 Sum_probs=44.9
Q ss_pred HHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH----HHHHHhhhhhhhh
Q 012104 358 NKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL----EIQKEYGKLLKDF 433 (471)
Q Consensus 358 ~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~----~~~~~~~~~~~~~ 433 (471)
..+.+++.+.++-++|.. ....|||.+|.+|. +--+.++..+........ .+-...-+.++.+
T Consensus 72 ~~I~kAI~~s~l~l~P~~--------dg~~iri~iP~lT~-----E~R~~lvK~~k~~~E~~Kv~iRniR~~~~~~lKk~ 138 (179)
T cd00520 72 KAIEKAILNSDLGLNPNN--------DGAVIRVNLPPLTE-----ERRKELVKDAKKIAEEAKVAIRNIRRDANDKIKKL 138 (179)
T ss_pred HHHHHHHHHCCCCCCcCc--------CCCEEEecCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456788888887776531 13489999988763 344444444444433322 1111222333333
Q ss_pred hcc-CCChHHHHHHHHHHHHHHhcC
Q 012104 434 NKG-LVNNKDIEALKADVEKFASSF 457 (471)
Q Consensus 434 ~~~-~~~~~~~~~~~~~v~~~~~~~ 457 (471)
.+. ..++.+.....++|.++...|
T Consensus 139 ~k~~~iseD~~k~~~~~iqkltd~~ 163 (179)
T cd00520 139 EKEKEISEDEVKKAEEDLQKLTDEY 163 (179)
T ss_pred hccCCCCchHHHHHHHHHHHHHHHH
Confidence 221 112334556667777766544
No 445
>PRK04570 cell division protein ZipA; Provisional
Probab=30.36 E-value=4.6e+02 Score=24.50 Aligned_cols=26 Identities=8% Similarity=0.340 Sum_probs=22.3
Q ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCc
Q 012104 439 NNKDIEALKADVEKFASSFDMPGFKM 464 (471)
Q Consensus 439 ~~~~~~~~~~~v~~~~~~~p~~~~~~ 464 (471)
....++..|++|+++-++.-+|.|.+
T Consensus 214 T~Q~iehyRqrIreyeRr~~~p~~~~ 239 (243)
T PRK04570 214 GRQRIAHIRDELRAYDRQHQAPPLTK 239 (243)
T ss_pred CHHHHHHHHHHHHHHHHhhcCCCccc
Confidence 45678999999999999999988754
No 446
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=29.81 E-value=1.4e+02 Score=31.09 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=62.2
Q ss_pred eeEEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC-CCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Q 012104 344 HLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 422 (471)
Q Consensus 344 ~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~-~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~~~ 422 (471)
.+++.|+.-.+.++-++.+.+.+.+-.+..-.+-++. -+..-..+|.|.-.+- .++-+.+++...+.++++.....
T Consensus 50 ~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~Tg~g~i~~AV~A~k~GA~Dfl---~KP~~~~~L~~~v~ral~~~~~~ 126 (464)
T COG2204 50 DLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVMTGHGDIDTAVEALRLGAFDFL---EKPFDLDRLLAIVERALELRELQ 126 (464)
T ss_pred CEEEEecCCCCCchHHHHHHHHhhCCCCCEEEEeCCCCHHHHHHHHhcCcceee---eCCCCHHHHHHHHHHHHHHhhhh
Confidence 3677788777889999988888765221111111111 0011234666542211 23557889999999998875422
Q ss_pred HHH---hhhhhhhhhccCCChHHHHHHHHHHHHHHh
Q 012104 423 QKE---YGKLLKDFNKGLVNNKDIEALKADVEKFAS 455 (471)
Q Consensus 423 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 455 (471)
.+. ..+...++...+..++.++++++.+..++.
T Consensus 127 ~e~~~~~~~~~~~~~~liG~S~am~~l~~~i~kvA~ 162 (464)
T COG2204 127 RENRRSLKRAKSLGGELVGESPAMQQLRRLIAKVAP 162 (464)
T ss_pred hhhhhhhhccccccCCceecCHHHHHHHHHHHHHhC
Confidence 111 111112333445556789999999988875
No 447
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=29.76 E-value=82 Score=26.29 Aligned_cols=39 Identities=23% Similarity=0.136 Sum_probs=21.0
Q ss_pred HHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 173 LEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 173 le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
+++++...-|-+|++... .+.+.+.++|++++++|+.=.
T Consensus 74 l~~l~~~~~P~iIvt~~~-----~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 74 LEKLFSYNPPCIIVTRGL-----EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp HHHHCTTT-S-EEEETTT--------HHHHHHHHHCT--EEEES
T ss_pred HHHHhCCCCCEEEEECcC-----CCCHHHHHHHHHhCCcEEEcC
Confidence 444444333455555432 457899999999999988644
No 448
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=28.96 E-value=3.9e+02 Score=25.41 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCC---Cccc-------cHHHHHHHHHHhCCEEEEec
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAY---PRDW-------DYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~---g~~~-------d~~~i~~ia~~~g~~livD~ 216 (471)
|.+.-+.++-++. .+|.+++++..|+ |+.. .++-+.+|+++.+.-|++|-
T Consensus 187 Gp~~~~~l~~i~e-~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~~lViDH 246 (304)
T COG2248 187 GPINDEALEFILE-KRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNATLVIDH 246 (304)
T ss_pred CCCccHHHHHHHh-cCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcceEEEee
Confidence 5777788888776 4899998885543 2222 24566788888889999984
No 449
>PRK06683 hypothetical protein; Provisional
Probab=28.86 E-value=1.3e+02 Score=23.08 Aligned_cols=44 Identities=11% Similarity=-0.158 Sum_probs=30.3
Q ss_pred HHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 171 DKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
++..+.++..+.++|++-.+.... -.+.|.+.|+.++++++.-.
T Consensus 17 ~~v~kaik~gkaklViiA~Da~~~--~~~~i~~~~~~~~Vpv~~~~ 60 (82)
T PRK06683 17 KRTLEAIKNGIVKEVVIAEDADMR--LTHVIIRTALQHNIPITKVE 60 (82)
T ss_pred HHHHHHHHcCCeeEEEEECCCCHH--HHHHHHHHHHhcCCCEEEEC
Confidence 455666776788888865433222 35788899999999885544
No 450
>COG0233 Frr Ribosome recycling factor [Translation, ribosomal structure and biogenesis]
Probab=28.84 E-value=4.3e+02 Score=23.75 Aligned_cols=88 Identities=13% Similarity=0.277 Sum_probs=46.0
Q ss_pred HHHHHHHHhhcCeEeccCCcCCCCCCCCCCeeEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHH----HHHHHhhhhhhh
Q 012104 357 GNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTL----EIQKEYGKLLKD 432 (471)
Q Consensus 357 ~~~~~~~L~~~gI~v~~~~~p~~~~~~~~~~iRig~~~~t~~g~~~~d~~~l~~~i~~~l~~~~----~~~~~~~~~~~~ 432 (471)
-..+++.....++-++|.. .+..||+.+|.+|. +-=..++..++...+... .+-......++.
T Consensus 77 ~~~IekaI~~snLglnP~~--------dG~~IRv~~P~lTe-----ErRkelvK~~k~~~EeakvaiRniRrda~d~iKK 143 (187)
T COG0233 77 VKAIEKAILASNLGLNPNN--------DGNVIRVPLPPLTE-----ERRKELVKVAKKYAEEAKVAVRNIRRDANDKIKK 143 (187)
T ss_pred HHHHHHHHHHcCCCCCcCc--------CCCeEEecCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888888888888753 23569999998874 444444444444333322 010111112222
Q ss_pred hh-ccCCChHHHHHHHHHHHHHHhcC
Q 012104 433 FN-KGLVNNKDIEALKADVEKFASSF 457 (471)
Q Consensus 433 ~~-~~~~~~~~~~~~~~~v~~~~~~~ 457 (471)
.. +..-.+.+.....++|..+...|
T Consensus 144 ~~K~~~isEDe~k~~e~~iQKlTd~y 169 (187)
T COG0233 144 LEKDKEISEDEVKKAEEEIQKLTDEY 169 (187)
T ss_pred HhccCCcchHHHHHHHHHHHHHHHHH
Confidence 11 11112334566667777766544
No 451
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=28.62 E-value=1.3e+02 Score=24.28 Aligned_cols=46 Identities=11% Similarity=-0.029 Sum_probs=32.8
Q ss_pred HHHHHhhh-CCCcEEEEcCCCCC---ccccHHHHHHHHHHhCCEEEEecc
Q 012104 172 KLEEKALD-FRPKLIICGGSAYP---RDWDYARFRAVADKCGALLLCDMA 217 (471)
Q Consensus 172 ~le~~~~~-~~pklIi~~~s~~g---~~~d~~~i~~ia~~~g~~livD~a 217 (471)
++.+.+.+ .+..+|+...++.- ...|-..|++.|-+++++++.+..
T Consensus 58 ~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg~~iRR~A~~~~Ip~~T~~~ 107 (112)
T cd00532 58 TVDAAIAEKGKFDVVINLRDPRRDRCTDEDGTALLRLARLYKIPVTTPNA 107 (112)
T ss_pred HHHHHHhCCCCEEEEEEcCCCCcccccCCChHHHHHHHHHcCCCEEECHH
Confidence 34556666 67888886543332 345677999999999999998754
No 452
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=28.48 E-value=1.9e+02 Score=23.39 Aligned_cols=51 Identities=18% Similarity=0.107 Sum_probs=36.6
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEecc
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a 217 (471)
..++.+++...+...+|.+|++|.-..+... -+++.+..+++|+-+-+-.+
T Consensus 37 ~~l~~~~l~~~~~~~~peiliiGTG~~~~~~-~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 37 SDLDPEALLPLLAEDRPDILLIGTGAEIAFL-PRALRAALRAAGIGVEVMST 87 (109)
T ss_pred ccCCHHHHHHHHhhCCCCEEEEcCCCCCCcC-CHHHHHHHHHcCCeEEEeCc
Confidence 3689999999886434999998855555443 46677888889887766544
No 453
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=28.18 E-value=1.5e+02 Score=18.52 Aligned_cols=19 Identities=32% Similarity=0.392 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHhcCC
Q 012104 440 NKDIEALKADVEKFASSFD 458 (471)
Q Consensus 440 ~~~~~~~~~~v~~~~~~~p 458 (471)
+...++|++.+.++|..+|
T Consensus 21 ~~t~~~I~~~l~~~C~~lP 39 (39)
T PF05184_consen 21 NKTEEEIKKALEKACNKLP 39 (39)
T ss_dssp TCHHHHHHHHHHHHHTTSC
T ss_pred CccHHHHHHHHHHHHhhCc
Confidence 3456789999999999887
No 454
>smart00642 Aamy Alpha-amylase domain.
Probab=28.11 E-value=58 Score=28.66 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=24.0
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
.+|..-+++++.+-|+++|+.|+.|.+-
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3566778999999999999999999864
No 455
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=27.78 E-value=1.8e+02 Score=23.41 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=35.4
Q ss_pred CCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhC--CEEEEecccc
Q 012104 168 IDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCG--ALLLCDMAHI 219 (471)
Q Consensus 168 iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g--~~livD~a~~ 219 (471)
...+.+.+.+...+|++|.++.+.+.....++.+.++.++.+ +.+++=+.|.
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 456777777777899999877544444445667777777774 7777765544
No 456
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=27.75 E-value=1.9e+02 Score=23.45 Aligned_cols=50 Identities=14% Similarity=-0.030 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEecc
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a 217 (471)
..++.++++.++.. +|.++++|.-.++... -+++.+.++++|+-+-+-.+
T Consensus 38 ~~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 38 EDLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred ccCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 36899999988864 7999988855555544 47777788888987766554
No 457
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=27.67 E-value=1.4e+02 Score=28.58 Aligned_cols=55 Identities=18% Similarity=0.323 Sum_probs=33.8
Q ss_pred CCCHHHHHHHh----hhCCCcEEEEc-CCC--CC-ccccHHHHHHHHHH-hCCEEEEeccccch
Q 012104 167 YIDYDKLEEKA----LDFRPKLIICG-GSA--YP-RDWDYARFRAVADK-CGALLLCDMAHISG 221 (471)
Q Consensus 167 ~iD~~~le~~~----~~~~pklIi~~-~s~--~g-~~~d~~~i~~ia~~-~g~~livD~a~~~g 221 (471)
.+.+++....+ ..-++++++|. ... |. .+.|+..|..+.+. .+.+|++|.+|+..
T Consensus 140 f~s~~e~~~aae~i~~~Gn~~vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHsvq 203 (281)
T PRK12457 140 FMSPTQMKHVVSKCREAGNDRVILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHSLQ 203 (281)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcccc
Confidence 45555544333 33478999985 222 22 33577776644443 39999999999743
No 458
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=26.39 E-value=54 Score=25.64 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=29.4
Q ss_pred HHHHHhhhCCCcEEEEcCCCCCccc--cHHHHHHHHHHhCCEEE
Q 012104 172 KLEEKALDFRPKLIICGGSAYPRDW--DYARFRAVADKCGALLL 213 (471)
Q Consensus 172 ~le~~~~~~~pklIi~~~s~~g~~~--d~~~i~~ia~~~g~~li 213 (471)
++.++++..+..+|++..++..... |-..|++.|.++++.++
T Consensus 51 ~i~~~i~~~~IdlVIn~~~~~~~~~~~dg~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 51 QIMDLIKNGKIDLVINTPYPFSDQEHTDGYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHTTSEEEEEEE--THHHHHTHHHHHHHHHHHHTTSHEE
T ss_pred HHHHHHHcCCeEEEEEeCCCCcccccCCcHHHHHHHHHcCCCCc
Confidence 4666777778888887755543322 67788999999998765
No 459
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=26.32 E-value=3.6e+02 Score=26.33 Aligned_cols=95 Identities=11% Similarity=0.080 Sum_probs=51.5
Q ss_pred eeecCChHHHHHHHHHHhcCCCC--EEEEe--CCCCCCcccccccccCCccceeccceeEEEeeeecCCCCCCCHHHHHH
Q 012104 100 NVQPYSGSPANFAAYTAVLEPHD--RIMGL--DLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSSTGYIDYDKLEE 175 (471)
Q Consensus 100 ~v~~~sGt~A~~~~~~all~pGD--~Vl~~--~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~~~~~iD~~~le~ 175 (471)
.|.++|-|.+...++...-+.|- +|++. .|.+.||..- +.+...|. .+..+ +| .++..
T Consensus 122 ~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~a-------k~L~~~gI--~~~~I-~D--------sa~~~ 183 (301)
T COG1184 122 VILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMA-------KELRQSGI--PVTVI-VD--------SAVGA 183 (301)
T ss_pred EEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHH-------HHHHHcCC--ceEEE-ec--------hHHHH
Confidence 57788888777777777767775 55554 4555565431 12223332 22221 12 22233
Q ss_pred HhhhCCCcEEEEcC-C--CCCcccc---HHHHHHHHHHhCCEEEE
Q 012104 176 KALDFRPKLIICGG-S--AYPRDWD---YARFRAVADKCGALLLC 214 (471)
Q Consensus 176 ~~~~~~pklIi~~~-s--~~g~~~d---~~~i~~ia~~~g~~liv 214 (471)
.++ +...|++|. + ..|..++ --.|+..|++.+.++++
T Consensus 184 ~~~--~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 184 FMS--RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HHH--hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 332 455566552 1 2344433 24677889999988876
No 460
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=26.03 E-value=57 Score=25.06 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=23.8
Q ss_pred CCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 181 RPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 181 ~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
-|+++.-|.. .--.+|+++|+++|++++.|..=
T Consensus 17 aP~VvAKG~g-----~~A~~I~~~A~e~~VPi~~~~~L 49 (82)
T TIGR00789 17 APKVVASGVG-----EVAERIIEIAKKHGIPIVEDPDL 49 (82)
T ss_pred CCEEEEEeCC-----HHHHHHHHHHHHcCCCEEeCHHH
Confidence 3666654421 23478999999999999999853
No 461
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=25.95 E-value=1.1e+02 Score=28.97 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=14.2
Q ss_pred CccccHHHHHHHHHHhCCEE
Q 012104 193 PRDWDYARFRAVADKCGALL 212 (471)
Q Consensus 193 g~~~d~~~i~~ia~~~g~~l 212 (471)
|..-..++++++|+++-+|+
T Consensus 207 GLTGT~eqvk~vak~yRVYf 226 (280)
T KOG2792|consen 207 GLTGTTEQVKQVAKKYRVYF 226 (280)
T ss_pred cccCCHHHHHHHHHHhEEee
Confidence 44446778888888887665
No 462
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=25.91 E-value=2e+02 Score=22.30 Aligned_cols=46 Identities=11% Similarity=0.131 Sum_probs=32.0
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHH-HHHHHHHhCCEEEEecc
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYAR-FRAVADKCGALLLCDMA 217 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~-i~~ia~~~g~~livD~a 217 (471)
..++.+.+...+.++|++..+..+. .... +..+|++++++++.=..
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~~--~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSPD--SIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSSG--HHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCChh--hhcccchhheeccceeEEEECC
Confidence 4667777776678888876544332 3455 88899999998875443
No 463
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.61 E-value=61 Score=30.97 Aligned_cols=28 Identities=18% Similarity=0.251 Sum_probs=24.6
Q ss_pred CCCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 191 AYPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 191 ~~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
.+|..-+++++++.|++.|+.||.|.+.
T Consensus 47 ~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 47 RFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp TTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ccchhhhhhhhhhccccccceEEEeeec
Confidence 4677779999999999999999999874
No 464
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=25.58 E-value=1.4e+02 Score=27.23 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=29.5
Q ss_pred CCCcEEEEc-CCCCCccccHHHHHHHHHHhCCEEEE
Q 012104 180 FRPKLIICG-GSAYPRDWDYARFRAVADKCGALLLC 214 (471)
Q Consensus 180 ~~pklIi~~-~s~~g~~~d~~~i~~ia~~~g~~liv 214 (471)
.+|-.|+|- -+..|.....+++.++|++||+.++.
T Consensus 155 l~Pa~VicEi~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCCCccccChHHHHHHHHHcCCcEEE
Confidence 578888876 56678888899999999999999874
No 465
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=25.04 E-value=1.7e+02 Score=23.29 Aligned_cols=43 Identities=14% Similarity=0.047 Sum_probs=29.6
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEE
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~liv 214 (471)
..++.+.++..+.++|++..+. +. .-.+.+...|++++++++.
T Consensus 21 ~~~v~kai~~gkaklViiA~D~-~~-~~~~~i~~~c~~~~Ip~~~ 63 (99)
T PRK01018 21 SKRTIKAIKLGKAKLVIVASNC-PK-DIKEDIEYYAKLSGIPVYE 63 (99)
T ss_pred HHHHHHHHHcCCceEEEEeCCC-CH-HHHHHHHHHHHHcCCCEEE
Confidence 3556667776678888866442 21 2357888999999999755
No 466
>PRK14625 hypothetical protein; Provisional
Probab=24.71 E-value=2.2e+02 Score=23.22 Aligned_cols=44 Identities=16% Similarity=0.051 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCC--CCCCCc
Q 012104 402 EKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFD--MPGFKM 464 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p--~~~~~~ 464 (471)
++|.+.|-++|..++..+. ...-+.-+++..+++..+| +|+|..
T Consensus 61 ~eD~e~LeDLI~aA~NdA~-------------------~k~~~~~~~~m~~~tgg~~~~lPG~~~ 106 (109)
T PRK14625 61 PGEGEVIADLIVAAHADAK-------------------KKLDAKQAQLMQEAAGPMAGLMGGLPG 106 (109)
T ss_pred CccHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 4677777777777666542 1112345677888999999 898764
No 467
>PRK14622 hypothetical protein; Provisional
Probab=24.44 E-value=1.9e+02 Score=23.25 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCCCC
Q 012104 402 EKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGFK 463 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~ 463 (471)
++|.+.|-++|-.++..+. ...-+...++...++..+|+|+|.
T Consensus 60 ~ed~e~LeDLI~aA~N~A~-------------------~k~~~~~~~~m~~~tgg~~lPG~~ 102 (103)
T PRK14622 60 PNDKAMLEDLVTAAVNAAV-------------------EKARTAADESMSKATGGIKIPGIA 102 (103)
T ss_pred cccHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHhCCCCCCCCC
Confidence 4677777777777666542 111234557788889999999874
No 468
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=24.38 E-value=3.9e+02 Score=25.20 Aligned_cols=47 Identities=15% Similarity=0.126 Sum_probs=34.3
Q ss_pred CCC-CHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEE
Q 012104 166 GYI-DYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (471)
Q Consensus 166 ~~i-D~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~li 213 (471)
+.+ |.+.+++.+++++.++|+=-..||...+ -+.+.+.|++.|+.++
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vIDATHPfA~~i-s~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVIDATHPFAAEI-SQNAIEACRELGIPYL 97 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECCCchHHHH-HHHHHHHHhhcCcceE
Confidence 567 9999999999888998873345665433 1345578999888776
No 469
>COG4962 CpaF Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]
Probab=24.04 E-value=2e+02 Score=28.69 Aligned_cols=68 Identities=24% Similarity=0.421 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHhcCCCCEEEEeCCCCCCcccccccccCCccceeccceeEEEeeeecC----CCCCCCHHHHHHHhhhC
Q 012104 105 SGSPANFAAYTAVLEPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNS----STGYIDYDKLEEKALDF 180 (471)
Q Consensus 105 sGt~A~~~~~~all~pGD~Vl~~~~~~~g~~s~~~~~~~g~~~~~~g~~~~~~~~~v~~----~~~~iD~~~le~~~~~~ 180 (471)
||-..+..++.+++.+..+|++..-+---.+.| -.++.+..++ ..+.+++++|-+.....
T Consensus 184 SGKTTlLNal~~~i~~~eRvItiEDtaELql~~----------------ph~vrL~TR~~n~Eg~gevtm~dLvkn~LRm 247 (355)
T COG4962 184 SGKTTLLNALSGFIDSDERVITIEDTAELQLAH----------------PHVVRLETRPPNVEGTGEVTMRDLVKNALRM 247 (355)
T ss_pred CCHHHHHHHHHhcCCCcccEEEEeehhhhccCC----------------CceEEEeecCCCCCCcceEEHHHHHHHHhhc
Confidence 444567777888888999999875322111111 1112222222 34789999998877777
Q ss_pred CCcEEEEc
Q 012104 181 RPKLIICG 188 (471)
Q Consensus 181 ~pklIi~~ 188 (471)
+|.-|+++
T Consensus 248 RPDRIiVG 255 (355)
T COG4962 248 RPDRIIVG 255 (355)
T ss_pred CccceEEE
Confidence 89767655
No 470
>PTZ00106 60S ribosomal protein L30; Provisional
Probab=23.53 E-value=1.7e+02 Score=23.77 Aligned_cols=44 Identities=11% Similarity=-0.033 Sum_probs=30.4
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEe
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD 215 (471)
.++..+.++..+.++|++..+.... -.+.+...|+.++++++..
T Consensus 30 ~~~vlkalk~gkaklViiA~D~~~~--~kkki~~~~~~~~Vpv~~~ 73 (108)
T PTZ00106 30 TKSTLKALRNGKAKLVIISNNCPPI--RRSEIEYYAMLSKTGVHHY 73 (108)
T ss_pred HHHHHHHHHcCCeeEEEEeCCCCHH--HHHHHHHHHhhcCCCEEEe
Confidence 4556666766678888865433222 3578889999999998753
No 471
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=23.52 E-value=1.6e+02 Score=30.02 Aligned_cols=48 Identities=10% Similarity=0.071 Sum_probs=33.9
Q ss_pred CCCHHHHHHHhhhCCCcEEEEc-----CCC-----CCccccH----HHHHHHHHHhCCEEEE
Q 012104 167 YIDYDKLEEKALDFRPKLIICG-----GSA-----YPRDWDY----ARFRAVADKCGALLLC 214 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~-----~s~-----~g~~~d~----~~i~~ia~~~g~~liv 214 (471)
..|++++.+.+...+|++++++ +++ -|.+-.+ .++.++|++.|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4689999999998999988864 222 2333233 3556899999988765
No 472
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=23.48 E-value=2.5e+02 Score=23.71 Aligned_cols=55 Identities=15% Similarity=0.209 Sum_probs=36.8
Q ss_pred CCCCCHHHHHHHhhhCCCcEEEEc--CCCCCcccc----HHHHH-HHHHHh-CCE-EEEecccc
Q 012104 165 TGYIDYDKLEEKALDFRPKLIICG--GSAYPRDWD----YARFR-AVADKC-GAL-LLCDMAHI 219 (471)
Q Consensus 165 ~~~iD~~~le~~~~~~~pklIi~~--~s~~g~~~d----~~~i~-~ia~~~-g~~-livD~a~~ 219 (471)
+..-+++.|.++++++++..|++| -+..|..-+ ..+++ ++++++ ++. .++|+.+.
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 357899999999999999988877 333343332 33443 455555 776 56898765
No 473
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=23.37 E-value=2.1e+02 Score=24.47 Aligned_cols=53 Identities=15% Similarity=0.243 Sum_probs=33.8
Q ss_pred CCC-CCHHHHHHHhhhCCCcEEEEc--CCCCCccccHH----HHH-HHHHHhCCE-EEEecc
Q 012104 165 TGY-IDYDKLEEKALDFRPKLIICG--GSAYPRDWDYA----RFR-AVADKCGAL-LLCDMA 217 (471)
Q Consensus 165 ~~~-iD~~~le~~~~~~~pklIi~~--~s~~g~~~d~~----~i~-~ia~~~g~~-livD~a 217 (471)
+.. .|++.|.+++++.+|..|++| .|..|...+.. +++ .+.++.++. ++.|+-
T Consensus 36 ~~~~~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DER 97 (141)
T COG0816 36 NGKPQDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDER 97 (141)
T ss_pred cccHhhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 344 699999999999999988877 44555544432 333 234445544 556764
No 474
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=22.82 E-value=1.5e+02 Score=25.91 Aligned_cols=46 Identities=26% Similarity=0.361 Sum_probs=34.5
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEecccc
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
.+.|.+.+++.+|.+|+++.+..|+. +. ..+|-+.|+.++.|....
T Consensus 72 a~al~~~i~~~~p~~Vl~~~t~~g~~--la--~rlAa~L~~~~vtdv~~l 117 (168)
T cd01715 72 APALVALAKKEKPSHILAGATSFGKD--LA--PRVAAKLDVGLISDVTAL 117 (168)
T ss_pred HHHHHHHHHhcCCCEEEECCCccccc--hH--HHHHHHhCCCceeeEEEE
Confidence 34566667777899999998888762 22 367888899999998754
No 475
>PRK07714 hypothetical protein; Provisional
Probab=22.74 E-value=2.1e+02 Score=22.68 Aligned_cols=43 Identities=7% Similarity=-0.003 Sum_probs=29.7
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEE
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLC 214 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~liv 214 (471)
.+++++.++..+.++|++....... -.+.+...|+.++++++.
T Consensus 23 ~~~v~~al~~g~~~lViiA~D~s~~--~~~ki~~~~~~~~vp~~~ 65 (100)
T PRK07714 23 EELVLKEVRSGKAKLVLLSEDASVN--TTKKITDKCTYYNVPMRK 65 (100)
T ss_pred HHHHHHHHHhCCceEEEEeCCCCHH--HHHHHHHHHHhcCCCEEE
Confidence 4667777776778888755333222 357888899999988763
No 476
>PF01904 DUF72: Protein of unknown function DUF72; InterPro: IPR002763 The function of this family is unknown. Aquifex aeolicus has two copies of this protein. A probable aspartyl-tRNA synthetase from Escherichia coli [] belongs to this group.; PDB: 1VPY_A 1ZTV_A 1VPQ_A.
Probab=22.52 E-value=2.5e+02 Score=26.10 Aligned_cols=72 Identities=10% Similarity=-0.028 Sum_probs=36.5
Q ss_pred EEEEccCCCCCHHHHHHHHhhcCeEeccCCcCC---CCC--C---CCCCeeEEec-CCC--CCcCCCHHHHHHHHHHHHH
Q 012104 346 VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFG---DSS--A---LAPGGVRIGT-PAM--TSRGLLEKDFEQIGEFLHR 414 (471)
Q Consensus 346 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~---~~~--~---~~~~~iRig~-~~~--t~~g~~~~d~~~l~~~i~~ 414 (471)
+.+.++...+-..++.+.|+++||.....-.|. .+. + ....++|+-- ... .....++++++++++.|.+
T Consensus 120 ~avE~R~~sW~~~~~~~~l~~~~~~~v~~d~~~~~~~p~~~~~~~~~~~y~RlhG~~~~~~~~~~Ys~~eL~~~a~~i~~ 199 (230)
T PF01904_consen 120 YAVEFRHPSWFTEEVFELLREHGVALVIADSPRLPSLPPPEPQTTPDFAYVRLHGRNGEGWYDYRYSDEELEEWAERIRA 199 (230)
T ss_dssp EEEE--BGGGGCHHHHHHHHHTT-EEEEEE---BTTC------SSTTEEEEEE--S-TTTTTB----HHHHHHHHHHHHH
T ss_pred eEEecCCcchhhHHHHHHHHHcCCEEEEeCCcccCCCCCcccccCCCCeEEeeccCcccccccccCCHHHHHHHHHHHHH
Confidence 345665544444678899999998754322222 111 1 1235799743 222 2334578999999999887
Q ss_pred HHH
Q 012104 415 AVT 417 (471)
Q Consensus 415 ~l~ 417 (471)
...
T Consensus 200 ~~~ 202 (230)
T PF01904_consen 200 WAA 202 (230)
T ss_dssp HHT
T ss_pred HHH
Confidence 655
No 477
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=22.48 E-value=2.2e+02 Score=22.88 Aligned_cols=44 Identities=20% Similarity=0.219 Sum_probs=29.5
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEe
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCD 215 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD 215 (471)
.+.+++.++..++++|++..+... .-.++|...|+.++++++.-
T Consensus 22 ~~~v~~aik~gk~~lVI~A~D~s~--~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKKKKVYLIIISNDISE--NSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHcCCceEEEEeCCCCH--hHHHHHHHHHHHcCCCEEEe
Confidence 466777787778888885533221 12578888899888876543
No 478
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.29 E-value=88 Score=29.61 Aligned_cols=27 Identities=19% Similarity=0.062 Sum_probs=23.2
Q ss_pred CccccHHHHHHHHHHhCCEEEEecccc
Q 012104 193 PRDWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 193 g~~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
|+.-+.+.+.++++++++-+++|++|=
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECCCc
Confidence 343388999999999999999999984
No 479
>PF13378 MR_MLE_C: Enolase C-terminal domain-like; PDB: 3FCP_B 3P0W_D 3VFC_A 3VDG_A 3FJ4_B 3CT2_B 3DGB_A 3V3W_A 3V4B_A 3NO1_E ....
Probab=21.76 E-value=1.5e+02 Score=23.72 Aligned_cols=51 Identities=8% Similarity=-0.002 Sum_probs=38.4
Q ss_pred CCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEecc
Q 012104 167 YIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDMA 217 (471)
Q Consensus 167 ~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~a 217 (471)
..++.+++++++..-..++-....-.|.+-...+++++|+++|+.++.=..
T Consensus 4 ~~~~~~~~~li~~~a~d~~~~~~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 54 (111)
T PF13378_consen 4 LFSLHDFRRLIEAGAVDIVQIDPTRCGGITEALRIAALAEAHGIPVMPHSM 54 (111)
T ss_dssp SSSHHHHHHHHHTTSCSEEEEBHHHHTSHHHHHHHHHHHHHTT-EEEEBSS
T ss_pred CCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHhCCCEEecCC
Confidence 457788888887655677766655556667788999999999999988764
No 480
>PRK07283 hypothetical protein; Provisional
Probab=21.75 E-value=2.2e+02 Score=22.52 Aligned_cols=42 Identities=10% Similarity=0.017 Sum_probs=29.0
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEE
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLL 213 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~li 213 (471)
.+++++.++..+.++|++....... -.+.+.+.|+.++++++
T Consensus 23 ~~~v~~aik~gk~~lVi~A~Das~~--~~kk~~~~~~~~~Vp~~ 64 (98)
T PRK07283 23 EELVVKAIQSGQAKLVFLANDAGPN--LTKKVTDKSNYYQVEVS 64 (98)
T ss_pred HHHHHHHHHcCCccEEEEeCCCCHH--HHHHHHHHHHHcCCCEE
Confidence 4677777877778888765332221 25788889999988875
No 481
>PRK00153 hypothetical protein; Validated
Probab=21.53 E-value=2.1e+02 Score=22.94 Aligned_cols=42 Identities=26% Similarity=0.430 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCChHHHHHHHHHHHHHHhcCCCCCC
Q 012104 402 EKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPGF 462 (471)
Q Consensus 402 ~~d~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~ 462 (471)
++|-+.|.+.|..++..+. ...-+..+++...++..+++|+|
T Consensus 62 ~~d~e~LedlI~~A~n~A~-------------------~~~~~~~~e~m~~~~gg~~~pgl 103 (104)
T PRK00153 62 PEDVEMLEDLILAAFNDAL-------------------RKAEETMKEKMGKLTGGLLPPGF 103 (104)
T ss_pred CcCHHHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHhCCCCCCCC
Confidence 3566677777777666543 11224567778888888988886
No 482
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=20.94 E-value=2.1e+02 Score=27.05 Aligned_cols=51 Identities=10% Similarity=-0.110 Sum_probs=41.6
Q ss_pred CCCCHHHHHHHhhhCCCcEEEEcCCCCCccccHHHHHHHHHHhCCEEEEec
Q 012104 166 GYIDYDKLEEKALDFRPKLIICGGSAYPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 166 ~~iD~~~le~~~~~~~pklIi~~~s~~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
...++.++++.+.....++|....+-.|......+++++|+++|+.++.=.
T Consensus 188 ~~~~~~~~~~~i~~~~~d~v~~k~~~~GGi~~~~~~~~~A~~~gi~~~~~~ 238 (265)
T cd03315 188 SAFTPHDAFRELALGAADAVNIKTAKTGGLTKAQRVLAVAEALGLPVMVGS 238 (265)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecccccCHHHHHHHHHHHHHcCCcEEecC
Confidence 467889999888766678887777777887889999999999999888753
No 483
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=20.92 E-value=3e+02 Score=19.07 Aligned_cols=48 Identities=17% Similarity=0.070 Sum_probs=29.3
Q ss_pred HHHHHHHHHcC-CceEeeCCCCCeeEEEEccCCCCCHHHHHHHHhhcCe
Q 012104 322 AVALGNYLTGK-GYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNI 369 (471)
Q Consensus 322 a~~l~~~L~~~-g~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 369 (471)
++.+.+.|.+. |+.-+.-.-.+..+.+...+..++.+++.+.+++.|.
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy 61 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGY 61 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCc
Confidence 34556677776 7653321223345566655545677889999988774
No 484
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=20.91 E-value=1.2e+02 Score=30.45 Aligned_cols=18 Identities=17% Similarity=0.381 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCEEEEecc
Q 012104 200 RFRAVADKCGALLLCDMA 217 (471)
Q Consensus 200 ~i~~ia~~~g~~livD~a 217 (471)
+|+++|++||++++.|-.
T Consensus 300 kIreiA~e~~Ipi~enpp 317 (363)
T COG1377 300 KIREIAKEHGIPIIENPP 317 (363)
T ss_pred HHHHHHHHcCCceecChH
Confidence 778999999999999864
No 485
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=20.72 E-value=2e+02 Score=24.52 Aligned_cols=49 Identities=12% Similarity=0.058 Sum_probs=34.4
Q ss_pred HHHHHHhhhCCCcEEEEcCCCCCc---cccHHHHHHHHHHhCCEEEEecccc
Q 012104 171 DKLEEKALDFRPKLIICGGSAYPR---DWDYARFRAVADKCGALLLCDMAHI 219 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~~g~---~~d~~~i~~ia~~~g~~livD~a~~ 219 (471)
.++.+++...+..+|+....|.+. ..|...|++.|-+++++++....-+
T Consensus 65 ~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~tA 116 (142)
T PRK05234 65 QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRATA 116 (142)
T ss_pred hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHHHH
Confidence 345566766677888754432333 4478899999999999999876543
No 486
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=20.59 E-value=2.6e+02 Score=27.71 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=35.9
Q ss_pred EEEEccCCCCCHHHHHHHHhhcCeEeccCCcCCCC--CCCCCCeeEEecCC-CCCcCCCHHHHHHHHH
Q 012104 346 VLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS--SALAPGGVRIGTPA-MTSRGLLEKDFEQIGE 410 (471)
Q Consensus 346 ~~v~~~~~~~~~~~~~~~L~~~gI~v~~~~~p~~~--~~~~~~~iRig~~~-~t~~g~~~~d~~~l~~ 410 (471)
+++|+......-+.+.+.|++.||.+|+. |.+. .....+||||..+. ++ ++++++++.+..
T Consensus 146 iVld~~~~~~~~~~i~~ELe~~GIrlnk~--~p~V~I~kk~~gGI~i~~t~~l~--~~d~~~ir~iL~ 209 (365)
T COG1163 146 IVLDVFEDPHHRDIIERELEDVGIRLNKR--PPDVTIKKKESGGIRINGTGPLT--HLDEDTVRAILR 209 (365)
T ss_pred EEEecCCChhHHHHHHHHHHhcCeEecCC--CCceEEEEeccCCEEEecccccc--cCCHHHHHHHHH
Confidence 44565432211346799999999999874 3221 12345899997632 22 355666666554
No 487
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=20.48 E-value=2.6e+02 Score=22.75 Aligned_cols=46 Identities=11% Similarity=0.051 Sum_probs=32.9
Q ss_pred HHHHHHhhhCCCcEEEEcCCC---CCccccHHHHHHHHHHhCCEEEEec
Q 012104 171 DKLEEKALDFRPKLIICGGSA---YPRDWDYARFRAVADKCGALLLCDM 216 (471)
Q Consensus 171 ~~le~~~~~~~pklIi~~~s~---~g~~~d~~~i~~ia~~~g~~livD~ 216 (471)
.++.+++...+..+|+...++ -+..-|-..|++.|-+++++++.-.
T Consensus 60 ~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~Ttl 108 (115)
T cd01422 60 QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLATNR 108 (115)
T ss_pred hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEEcH
Confidence 446666777778888866554 2224578899999999999988643
No 488
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=20.35 E-value=86 Score=32.81 Aligned_cols=29 Identities=10% Similarity=0.109 Sum_probs=25.9
Q ss_pred CCCCccccHHHHHHHHHHhCCEEEEeccc
Q 012104 190 SAYPRDWDYARFRAVADKCGALLLCDMAH 218 (471)
Q Consensus 190 s~~g~~~d~~~i~~ia~~~g~~livD~a~ 218 (471)
+.+|...+++++++-|++.|+.||+|.+.
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 45788889999999999999999999873
No 489
>PRK04175 rpl7ae 50S ribosomal protein L7Ae; Validated
Probab=20.33 E-value=2.3e+02 Score=23.55 Aligned_cols=45 Identities=9% Similarity=0.062 Sum_probs=30.6
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCCCcccc-HHHHHHHHHHhCCEEEEec
Q 012104 170 YDKLEEKALDFRPKLIICGGSAYPRDWD-YARFRAVADKCGALLLCDM 216 (471)
Q Consensus 170 ~~~le~~~~~~~pklIi~~~s~~g~~~d-~~~i~~ia~~~g~~livD~ 216 (471)
.+++.+.++..+.++|++..+..+. + .+.+..+|++++++++.-.
T Consensus 35 ~~~v~kaikkgkakLVilA~D~s~~--~i~~~~~~lc~~~~Vp~~~~~ 80 (122)
T PRK04175 35 TNETTKAVERGIAKLVVIAEDVDPE--EIVAHLPLLCEEKKIPYVYVP 80 (122)
T ss_pred HHHHHHHHHcCCccEEEEeCCCChH--HHHHHHHHHHHHcCCCEEEEC
Confidence 4566677776678888866443332 3 3688899999998866544
No 490
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=20.30 E-value=3.7e+02 Score=27.46 Aligned_cols=82 Identities=13% Similarity=0.111 Sum_probs=47.5
Q ss_pred CCCCEEEEeCCCCCCccc-ccccccCCccce--eccceeEEEeeeecCCCCCCCHHHHHHHhhhCCCcEEEEcCCCCCcc
Q 012104 119 EPHDRIMGLDLPSGGHLT-HGYYTSGGKKIS--ATSIYFESLPYKVNSSTGYIDYDKLEEKALDFRPKLIICGGSAYPRD 195 (471)
Q Consensus 119 ~pGD~Vl~~~~~~~g~~s-~~~~~~~g~~~~--~~g~~~~~~~~~v~~~~~~iD~~~le~~~~~~~pklIi~~~s~~g~~ 195 (471)
++||.|+...+.-+|... ... ..++ ....+.++.. .+. -.++-+.++|..+++..+||.++..+.-+.
T Consensus 317 ~~~d~vi~s~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~-~~h-~SgHa~~~dl~~~i~~~~Pk~~ipvHge~~-- 387 (422)
T TIGR00649 317 RKGDTVVFSAPPIPGNENIAVS-----ILLDIRLNEVGARVIK-RIH-VSGHASQEDHKLLLRLLKPKYIIPVHGEYR-- 387 (422)
T ss_pred CCCCEEEEECCCCCcHHHHHHH-----HHHHHHHHhcCCEEEe-ceE-ecCCCCHHHHHHHHHHhCCCEEEecCCcHH--
Confidence 488998888766666531 110 0011 1111222221 112 247899999999998889997775443322
Q ss_pred ccHHHHHHHHHHhCC
Q 012104 196 WDYARFRAVADKCGA 210 (471)
Q Consensus 196 ~d~~~i~~ia~~~g~ 210 (471)
.....+++|++.|.
T Consensus 388 -~~~~~~~~a~~~g~ 401 (422)
T TIGR00649 388 -MLINHTKLAEEEGY 401 (422)
T ss_pred -HHHHHHHHHHHcCC
Confidence 34566677777774
No 491
>COG4566 TtrR Response regulator [Signal transduction mechanisms]
Probab=20.04 E-value=4.1e+02 Score=24.10 Aligned_cols=28 Identities=21% Similarity=0.310 Sum_probs=23.7
Q ss_pred eEEEEccCCCCCHHHHHHHHhhcCeEec
Q 012104 345 LVLWDLRPLGLTGNKVEKLCDLCNITVN 372 (471)
Q Consensus 345 ~~~v~~~~~~~~~~~~~~~L~~~gI~v~ 372 (471)
-+++|++-.|++|.++...|.+.|+...
T Consensus 51 clllDvrMPg~sGlelq~~L~~~~~~~P 78 (202)
T COG4566 51 CLLLDVRMPGMSGLELQDRLAERGIRLP 78 (202)
T ss_pred eEEEecCCCCCchHHHHHHHHhcCCCCC
Confidence 4577988889999999999999998654
Done!