Query 012110
Match_columns 471
No_of_seqs 246 out of 2237
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 02:58:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 6.8E-76 2.3E-80 617.7 32.0 434 31-470 1-436 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 7.9E-60 2.7E-64 481.5 28.7 326 30-470 1-328 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.8E-59 1.3E-63 477.9 28.2 328 29-470 7-341 (383)
4 3cms_A Chymosin B; hydrolase, 100.0 5.6E-54 1.9E-58 430.7 28.6 284 76-470 2-285 (323)
5 4aa9_A Chymosin; hydrolase, as 100.0 5.3E-54 1.8E-58 430.2 25.7 281 79-470 2-282 (320)
6 1tzs_A Cathepsin E; hydrolase, 100.0 1.5E-53 5.3E-58 432.3 28.9 288 76-470 11-300 (351)
7 1dpj_A Proteinase A; proteinas 100.0 3.9E-53 1.3E-57 425.5 29.1 283 78-469 3-286 (329)
8 3k1w_A Renin; protease, altern 100.0 3.3E-53 1.1E-57 428.0 27.0 288 76-470 6-298 (341)
9 1htr_B Gastricsin; aspartyl pr 100.0 4.3E-53 1.5E-57 425.3 26.3 283 79-470 4-286 (329)
10 1am5_A Pepsin, acid proteinase 100.0 1.1E-52 3.6E-57 421.6 27.4 280 79-470 3-282 (324)
11 1miq_A Plasmepsin; aspartic pr 100.0 2.5E-52 8.7E-57 426.8 29.5 279 76-469 50-334 (375)
12 3qvc_A Histo-aspartic protease 100.0 2.1E-52 7.3E-57 435.6 29.2 280 76-470 125-410 (451)
13 2bju_A Plasmepsin II; aspartic 100.0 7.3E-52 2.5E-56 431.2 26.6 281 76-470 126-411 (453)
14 1mpp_A Pepsin; hydrolase(acid 100.0 1.6E-51 5.6E-56 418.9 25.8 288 75-469 5-317 (361)
15 1yg9_A Aspartic protease BLA G 100.0 2.2E-51 7.6E-56 413.0 24.9 281 76-470 5-291 (330)
16 2apr_A Rhizopuspepsin; hydrola 100.0 6.8E-49 2.3E-53 394.1 30.2 274 84-470 11-287 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 1.9E-48 6.5E-53 391.5 28.4 274 84-470 11-292 (329)
18 1b5f_A Protein (cardosin A); h 100.0 1.5E-48 5.1E-53 374.9 25.9 238 77-318 2-239 (239)
19 1j71_A Candidapepsin, aspartic 100.0 1.9E-48 6.4E-53 392.3 27.2 274 78-470 3-289 (334)
20 3fv3_A SAPP1P-secreted asparti 100.0 2.5E-48 8.4E-53 392.1 27.9 277 78-469 3-293 (339)
21 1oew_A Endothiapepsin; hydrola 100.0 2.3E-48 8E-53 390.8 27.3 271 86-470 13-291 (329)
22 2qzx_A Candidapepsin-5; aspart 100.0 1E-47 3.6E-52 388.1 29.6 228 78-318 3-241 (342)
23 3pvk_A Candidapepsin-2; hydrol 100.0 4.8E-47 1.7E-51 383.0 28.0 229 78-318 3-241 (342)
24 1izd_A Aspartic proteinase; su 100.0 2.7E-47 9.3E-52 382.1 25.8 268 86-470 13-285 (323)
25 1ibq_A Aspergillopepsin; aspar 100.0 1.3E-46 4.3E-51 377.6 28.1 268 86-470 12-287 (325)
26 1bxo_A Protein (penicillopepsi 100.0 3.6E-47 1.2E-51 381.2 21.4 267 86-470 13-285 (323)
27 3lpj_A Beta-secretase 1; alzhe 100.0 4.3E-47 1.5E-51 397.8 21.0 232 81-318 67-313 (455)
28 1wkr_A Polyporopepsin; hydrola 100.0 6.3E-46 2.2E-50 374.7 27.7 261 78-463 3-277 (340)
29 2ewy_A Beta-secretase 2; BACE2 100.0 9.5E-46 3.3E-50 379.3 24.9 232 81-318 6-249 (383)
30 3vf3_A Beta-secretase 1; struc 100.0 1.8E-45 6.2E-50 379.6 24.1 231 82-318 22-267 (402)
31 2qp8_A Beta-secretase 1; BACE1 100.0 1E-44 3.5E-49 373.2 24.8 231 81-318 14-260 (395)
32 3aup_A SBG7S, BG, basic 7S glo 100.0 9.1E-44 3.1E-48 367.0 24.0 285 77-470 9-347 (403)
33 3vla_A EDGP; extracellular, in 100.0 4.2E-43 1.4E-47 362.6 18.1 233 76-318 7-294 (413)
34 1t6e_X Xylanase inhibitor; two 100.0 4.1E-40 1.4E-44 337.3 15.4 222 79-318 4-258 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 2.4E-33 8.3E-38 269.1 19.7 197 169-470 1-199 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 3.2E-23 1.1E-27 170.1 11.1 93 78-170 3-96 (97)
37 3rfi_A Asp; PSI, saposin, hydr 99.6 1.7E-16 5.9E-21 132.3 1.5 107 316-423 2-108 (108)
38 1b5f_B Protein (cardosin A); h 98.2 5.5E-07 1.9E-11 71.5 2.6 44 427-470 1-46 (87)
39 2qyp_A Proactivator polypeptid 97.7 8.8E-06 3E-10 65.1 1.5 49 384-435 4-52 (91)
40 3bqp_A Proactivator polypeptid 97.6 3.3E-05 1.1E-09 59.9 3.5 48 385-435 2-49 (80)
41 4ddj_A Saposin-A, protein A; s 97.5 5.8E-05 2E-09 59.1 3.6 41 385-425 3-43 (83)
42 1l9l_A Granulysin; saposin fol 97.4 9.5E-05 3.2E-09 56.5 3.3 39 386-425 2-40 (74)
43 1of9_A Pore-forming peptide am 97.3 0.00015 5.3E-09 55.9 3.2 41 385-426 2-42 (77)
44 2gtg_A Proactivator polypeptid 97.2 0.00021 7.2E-09 55.8 4.0 41 384-424 3-43 (83)
45 1nkl_A NK-lysin; saposin fold, 97.2 0.00017 5.7E-09 55.8 2.8 39 386-424 2-40 (78)
46 1n69_A Saposin B; lipid bindin 97.1 0.00032 1.1E-08 54.6 3.6 42 384-425 2-44 (81)
47 2js9_A Saposin-like protein fa 96.8 0.0002 7E-09 57.9 -0.2 52 383-436 19-70 (99)
48 2i1a_A DNA damage-inducible pr 93.9 0.058 2E-06 46.4 4.8 90 87-201 24-115 (148)
49 2qyp_A Proactivator polypeptid 89.3 0.099 3.4E-06 41.1 0.9 40 321-360 46-85 (91)
50 3s8i_A Protein DDI1 homolog 1; 89.3 0.4 1.4E-05 41.3 4.9 91 87-201 22-114 (148)
51 3bqp_A Proactivator polypeptid 87.4 0.14 4.7E-06 38.9 0.5 37 321-357 43-79 (80)
52 2js9_A Saposin-like protein fa 83.6 0.26 9E-06 39.4 0.5 37 321-357 63-99 (99)
53 1nkl_A NK-lysin; saposin fold, 82.6 0.2 6.7E-06 38.2 -0.6 37 321-357 41-77 (78)
54 2gtg_A Proactivator polypeptid 82.3 0.21 7.1E-06 38.3 -0.6 38 321-358 45-82 (83)
55 1of9_A Pore-forming peptide am 80.8 0.22 7.6E-06 37.8 -0.9 38 319-356 40-77 (77)
56 2hs1_A HIV-1 protease; ultra-h 77.7 3.1 0.0001 33.1 4.9 30 90-121 9-38 (99)
57 4ddj_A Saposin-A, protein A; s 77.0 0.32 1.1E-05 37.3 -1.1 37 321-357 45-82 (83)
58 1fmb_A EIAV protease; hydrolas 76.4 2.6 8.8E-05 33.9 4.1 27 89-117 8-34 (104)
59 1n69_A Saposin B; lipid bindin 75.7 0.43 1.5E-05 36.5 -0.7 36 321-357 45-80 (81)
60 3ec0_A Protease; HIV-2, inhibi 72.1 4.7 0.00016 32.1 4.6 30 90-121 9-38 (99)
61 3s64_A AC-SLP-1, saposin-like 66.7 1.1 3.7E-05 34.8 -0.2 38 385-424 10-47 (87)
62 3vcm_P Prorenin; aspartic prot 66.4 2.7 9.4E-05 27.8 1.8 23 29-51 7-29 (43)
63 3liy_A Protease; hydrolase, hy 65.8 5.6 0.00019 32.4 3.8 33 90-122 11-46 (116)
64 2hah_A Protease, retropepsin; 60.7 7.8 0.00027 31.7 3.9 27 90-119 15-41 (116)
65 3sqf_A Protease; folded monome 53.8 13 0.00046 30.2 4.1 31 90-122 10-40 (114)
66 1htr_P Progastricsin (Pro segm 52.2 7.1 0.00024 25.2 1.9 22 30-51 2-23 (43)
67 3slz_A GAG-Pro-POL polyprotein 52.0 17 0.00057 30.4 4.6 30 89-120 22-51 (132)
68 1tzs_P Activation peptide from 50.9 6.4 0.00022 24.0 1.5 23 29-51 2-24 (35)
69 1l9l_A Granulysin; saposin fol 50.8 2.8 9.5E-05 31.4 -0.4 33 321-353 41-73 (74)
70 3vdj_A Circumsporozoite (CS) p 48.4 11 0.00039 28.2 2.7 30 405-434 5-34 (77)
71 2i1a_A DNA damage-inducible pr 47.5 15 0.00052 30.8 3.8 29 276-311 31-59 (148)
72 3s8i_A Protein DDI1 homolog 1; 46.7 14 0.00048 31.4 3.4 28 277-311 30-57 (148)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 41.7 22 0.00075 32.0 4.0 29 90-120 9-37 (203)
74 2rsp_A RSV protease; hydrolase 38.6 29 0.001 28.6 4.0 25 96-122 27-51 (124)
75 1ssz_A Pulmonary surfactant-as 28.0 27 0.00094 20.9 1.5 17 388-404 1-17 (34)
76 1b5f_A Protein (cardosin A); h 26.1 63 0.0022 29.3 4.5 38 79-118 181-226 (239)
77 3s64_A AC-SLP-1, saposin-like 24.3 12 0.0004 29.0 -0.8 51 306-356 36-87 (87)
78 3aup_A SBG7S, BG, basic 7S glo 22.3 76 0.0026 31.2 4.6 41 77-119 217-276 (403)
79 1bxo_A Protein (penicillopepsi 21.0 64 0.0022 30.6 3.6 43 255-307 3-45 (323)
80 3ka2_A [L-Ala51;Gly51']HIV-1 p 20.5 1.1E+02 0.0037 27.4 4.6 30 90-121 113-142 (203)
81 1ibq_A Aspergillopepsin; aspar 20.3 64 0.0022 30.7 3.5 42 256-307 3-44 (325)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.8e-76 Score=617.72 Aligned_cols=434 Identities=71% Similarity=1.206 Sum_probs=360.4
Q ss_pred EEEeeeecCCCchhhhhhcchhhhhHHHHHhhhhcCCCCCCCCCCCcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecC
Q 012110 31 VRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTG 110 (471)
Q Consensus 31 ~~ipl~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTG 110 (471)
+||||+|++..++.+.+++......+. +.+++.. .++..+...+||.|+.+.+|+++|+||||||+|.|+||||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTG 74 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQP---LLSGANP---LRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTG 74 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETT
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHH---HHhhccc---ccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCC
Confidence 489999999999988776533211110 1122211 1222345679999999999999999999999999999999
Q ss_pred CCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeEEEEEEEEEeeEeeccceEEEEEecCCcccc
Q 012110 111 SSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFM 190 (471)
Q Consensus 111 Ss~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~ 190 (471)
|+++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++++.||++....+..|.
T Consensus 75 Ss~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~ 154 (478)
T 1qdm_A 75 SSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFL 154 (478)
T ss_dssp CCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHH
T ss_pred CcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccc
Confidence 99999999999645689999999999999999999999999999999999999999999999999999999987665566
Q ss_pred ccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECccCCCCCccceeEEecccccceE
Q 012110 191 VAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 270 (471)
Q Consensus 191 ~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~ 270 (471)
...++||||||++..+.....|++++|++||.|++++||+||++..+...+|+|+|||+|+++|.|+++|+|+...++|.
T Consensus 155 ~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~ 234 (478)
T 1qdm_A 155 VAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQ 234 (478)
T ss_dssp HCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEE
T ss_pred cccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEE
Confidence 67789999999998887777889999999999999999999998643345899999999999999999999999899999
Q ss_pred EEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCccccc
Q 012110 271 FNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKIC 350 (471)
Q Consensus 271 v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c 350 (471)
|.+++|.|+++.+.++..+..+|+||||+++++|++++++|++++++.+.++.+|+..+.+||...|++++++++|..+|
T Consensus 235 v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC 314 (478)
T 1qdm_A 235 FDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKIC 314 (478)
T ss_dssp EEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHH
T ss_pred EEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhh
Confidence 99999999998876666788999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCee
Q 012110 351 SQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESA 430 (471)
Q Consensus 351 ~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (471)
+..|+|..++.+..++.++.++++.++++.+..+..+|.+|||++.|+|++|.+|.|+|+|+.+++++|.+.+...|.|.
T Consensus 315 ~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~ 394 (478)
T 1qdm_A 315 SQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESA 394 (478)
T ss_dssp HHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCE
T ss_pred ccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCCCCCcEEEEECCEEEEeCCCcceEEccCC--CcccC
Q 012110 431 VDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHG--SLPYS 470 (471)
Q Consensus 431 ~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 470 (471)
|+|+.+..+|.|+|+|||+.|+|+|++||++...+ ..|++
T Consensus 395 v~C~~~~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~ 436 (478)
T 1qdm_A 395 VDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCIS 436 (478)
T ss_dssp ECGGGGTTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEE
T ss_pred eecccccccccEEEEECCEEEEEChHHhEEEccCCCCCeEEE
Confidence 99999999999999999999999999999997663 56874
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=7.9e-60 Score=481.49 Aligned_cols=326 Identities=40% Similarity=0.716 Sum_probs=283.8
Q ss_pred eEEEeeeecCCCchhhhhhcchhhhhHHHHHhhhhcCCCCCCCCC--CCcceeeeeecCCcEEEEEEEEcCCCcEEEEEE
Q 012110 30 LVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDS--EDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIF 107 (471)
Q Consensus 30 ~~~ipl~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~l 107 (471)
++||||+|.++.|+.+++++.+++..+. +++.++.++... .....+||.|+.|.+|+++|+||||||+|.|+|
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~ 75 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKT-----HKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIF 75 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHH-----CCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEE
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhh-----hhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEE
Confidence 4799999999999999888876533211 122222111111 145678999999999999999999999999999
Q ss_pred ecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeEEEEEEEEEeeEeeccceEEEEEecCCc
Q 012110 108 DTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV 187 (471)
Q Consensus 108 DTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~ 187 (471)
||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+++|.++.|+|++|+..++++.||++....+.
T Consensus 76 DTGSs~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~ 154 (370)
T 3psg_A 76 DTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGS 154 (370)
T ss_dssp ETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCG
T ss_pred eCCCCccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeeccc
Confidence 999999999999995 5689999999999999999999999999999999999999999999999999999999987766
Q ss_pred cccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECccCCCCCccceeEEeccccc
Q 012110 188 TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKG 267 (471)
Q Consensus 188 ~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~ 267 (471)
.+....++||||||++..+....++++++|++||.|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.+++
T Consensus 155 ~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~ 232 (370)
T 3psg_A 155 FLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEG 232 (370)
T ss_dssp GGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEET
T ss_pred ccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccc
Confidence 6777789999999999988777889999999999999999999999862 34899999999999999999999999999
Q ss_pred ceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCcc
Q 012110 268 YWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPK 347 (471)
Q Consensus 268 ~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~ 347 (471)
+|.|.+++|+|+++.+. +..++.+++||||+++++|++++++|.+++++.
T Consensus 233 ~w~v~l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----------------------------- 282 (370)
T 3psg_A 233 YWQITLDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----------------------------- 282 (370)
T ss_dssp TEEEEECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE-----------------------------
T ss_pred eeEEEEeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc-----------------------------
Confidence 99999999999998775 557899999999999999999999999999887
Q ss_pred cccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCC
Q 012110 348 KICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG 427 (471)
Q Consensus 348 ~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (471)
+...|
T Consensus 283 ---------------------------------------------------------------------------~~~~g 287 (370)
T 3psg_A 283 ---------------------------------------------------------------------------ENSDG 287 (370)
T ss_dssp ---------------------------------------------------------------------------ECTTC
T ss_pred ---------------------------------------------------------------------------ccCCC
Confidence 12467
Q ss_pred CeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 428 ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 428 ~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
.|.|+|+...++|.|+|+|+|++|+|+|++|+++ ....|++
T Consensus 288 ~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~--~~~~C~~ 328 (370)
T 3psg_A 288 EMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQ--DDDSCTS 328 (370)
T ss_dssp CEECCGGGGGGCCCEEEEETTEEEEECHHHHEEE--CSSCEEE
T ss_pred cEEEECCCcccCCcEEEEECCEEEEECHHHhccc--CCCEEEE
Confidence 8999999999999999999999999999999999 3345874
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.8e-59 Score=477.90 Aligned_cols=328 Identities=39% Similarity=0.740 Sum_probs=260.5
Q ss_pred ceEEEeeeecCCCchhhhhhcc-hhhhhHHHHHhhhhcCCC-CCCCCCCCcceeeeeecCCcEEEEEEEEcCCCcEEEEE
Q 012110 29 GLVRIGLKKMKLDPNNRLAARL-ESEHGEALRASVKKYGFP-NNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVI 106 (471)
Q Consensus 29 ~~~~ipl~r~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~ 106 (471)
.++||||+|+++.++.+++.+. ..+ +.+++... ...........+||.|+.+.+|+++|+||||||+|.|+
T Consensus 7 ~~~~i~l~k~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi 79 (383)
T 2x0b_A 7 TFKRIFLKRMPSIRESLKERGVDMAR-------LGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVV 79 (383)
T ss_dssp ---------------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEE
T ss_pred cEEEEEEEECCcHHHHHHHhCchHHH-------HHHhhccccccccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEE
Confidence 4789999999988888777664 221 11222100 00000013456899999999999999999999999999
Q ss_pred EecCCCcEEEeCCCCCC-CcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeEEEEEEEEEeeEeeccceEEEEEecC
Q 012110 107 FDTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREP 185 (471)
Q Consensus 107 lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~ 185 (471)
|||||+++||++..|.. ...|..|+.|+|++|+||+..++.|.+.|++|+++|.+++|+|++|+..++ +.||++....
T Consensus 80 ~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~ 158 (383)
T 2x0b_A 80 FDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMP 158 (383)
T ss_dssp EETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred EeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecC
Confidence 99999999999999952 357999999999999999999999999999999999999999999999999 9999999876
Q ss_pred CccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCCC--CCceEEECccCCCCCccceeEEec
Q 012110 186 GVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQED--EGGEIVFGGVDPNHYKGKHTYVPV 263 (471)
Q Consensus 186 ~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~--~~G~L~fGgiD~s~~~G~l~~~pv 263 (471)
+..|....+|||||||++..+.....|++++|++||.|++++||+||++..+.. .+|+|+|||+|+++|.|+++|+|+
T Consensus 159 g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv 238 (383)
T 2x0b_A 159 ALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINL 238 (383)
T ss_dssp HHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEB
T ss_pred CcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEc
Confidence 655666788999999999988777889999999999999999999999864321 389999999999999999999999
Q ss_pred ccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhc
Q 012110 264 TQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFE 343 (471)
Q Consensus 264 ~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~ 343 (471)
.++++|.|.+++|.|+++.+. +..++.+|+||||+++++|.+++++|++++++.
T Consensus 239 ~~~~~w~v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~------------------------- 292 (383)
T 2x0b_A 239 IKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK------------------------- 292 (383)
T ss_dssp SSTTSCEEEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE-------------------------
T ss_pred CCCceEEEEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc-------------------------
Confidence 999999999999999998753 567899999999999999999999999999876
Q ss_pred cCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCC
Q 012110 344 AHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMP 423 (471)
Q Consensus 344 ~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (471)
+
T Consensus 293 -------------------------------------------------------------------------------~ 293 (383)
T 2x0b_A 293 -------------------------------------------------------------------------------K 293 (383)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 2
Q ss_pred CCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 424 SPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 424 ~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
..|.|.++|+++.++|.|+|+|+|++|+|+|++|+++..+ +..|++
T Consensus 294 -~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~ 341 (383)
T 2x0b_A 294 -RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 341 (383)
T ss_dssp -CSSCEEEEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEB
T ss_pred -cCCcEEEeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEE
Confidence 3577999999999999999999999999999999998764 447984
No 4
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=5.6e-54 Score=430.66 Aligned_cols=284 Identities=43% Similarity=0.804 Sum_probs=258.2
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
+...+||.|+.+.+|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 2 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 80 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTG 80 (323)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCC
Confidence 45678999999999999999999999999999999999999999995 45899899999999999999999999999999
Q ss_pred eEEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCC
Q 012110 156 AIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (471)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~ 235 (471)
+++|.+++|+|++++.+++++.||++....+..+....++||||||++..+....++++++|+++|.|++++||+||.+.
T Consensus 81 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~ 160 (323)
T 3cms_A 81 SMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN 160 (323)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTT
T ss_pred CeEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCC
Confidence 99999999999999999999999999987654455567899999999988877788999999999999999999999886
Q ss_pred CCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHh
Q 012110 236 QQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAI 315 (471)
Q Consensus 236 ~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i 315 (471)
.. .|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|++++++|++++
T Consensus 161 ~~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~ 236 (323)
T 3cms_A 161 GQ---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAI 236 (323)
T ss_dssp SS---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHH
T ss_pred CC---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHh
Confidence 32 49999999999999999999999999999999999999998764 346789999999999999999999999999
Q ss_pred CCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHH
Q 012110 316 GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAV 395 (471)
Q Consensus 316 ~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (471)
++..
T Consensus 237 ~~~~---------------------------------------------------------------------------- 240 (323)
T 3cms_A 237 GATQ---------------------------------------------------------------------------- 240 (323)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCee----------------------------------------------------------------------------
Confidence 8761
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 396 VWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
...+.|.++|++...+|.|+|+|+|++|+|+|++|+++ .+..|+.
T Consensus 241 ----------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~ 285 (323)
T 3cms_A 241 ----------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTS 285 (323)
T ss_dssp ----------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE--ETTEEEE
T ss_pred ----------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC--CCCEEEE
Confidence 13467899999988999999999999999999999998 4567873
No 5
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=5.3e-54 Score=430.16 Aligned_cols=281 Identities=44% Similarity=0.826 Sum_probs=252.4
Q ss_pred eeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEE
Q 012110 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (471)
Q Consensus 79 ~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~ 158 (471)
.+||.|+.|..|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|+++
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 46899999999999999999999999999999999999999996 56799899999999999999999999999999999
Q ss_pred eEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCC
Q 012110 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (471)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~ 238 (471)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|+++|.|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765555667899999999988877788999999999999999999999985
Q ss_pred CCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCc
Q 012110 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (471)
Q Consensus 239 ~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~ 318 (471)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|++++++|++++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 346789999999999999999999999999876
Q ss_pred ceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHH
Q 012110 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (471)
Q Consensus 319 ~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (471)
T Consensus 237 -------------------------------------------------------------------------------- 236 (320)
T 4aa9_A 237 -------------------------------------------------------------------------------- 236 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
....|.|.++|+....+|.|+|+|+|++++|+|++|+.+ .+..|+.
T Consensus 237 ------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~--~~~~C~~ 282 (320)
T 4aa9_A 237 ------------------------ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK--DQGFCTS 282 (320)
T ss_dssp ------------------------ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE--ETTEEEE
T ss_pred ------------------------ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC--CCCeEEE
Confidence 123578999999988999999999999999999999987 3466873
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-53 Score=432.29 Aligned_cols=288 Identities=47% Similarity=0.839 Sum_probs=256.6
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
+...+||.|+.+..|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34457999998999999999999999999999999999999999995 46899999999999999999999999999999
Q ss_pred eEEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCC
Q 012110 156 AIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (471)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~ 235 (471)
+++|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|+++|.|++++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999887665566678899999999988877778899999999999999999999987
Q ss_pred CCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHh
Q 012110 236 QQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAI 315 (471)
Q Consensus 236 ~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i 315 (471)
.+....|+|+|||+|+++|.|+++|+|+...++|.|.+++|.|+++.+. +..+..+||||||+++++|.+++++|++++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 5433489999999999999999999999999999999999999998753 456789999999999999999999999999
Q ss_pred CCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHH
Q 012110 316 GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAV 395 (471)
Q Consensus 316 ~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (471)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 8761
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 396 VWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
.. |.|.++|+....+|.|+|+|+|++|+|+|++|+++... +..|+.
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~ 300 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSS 300 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEE
Confidence 12 67999999988999999999999999999999998653 357873
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.9e-53 Score=425.54 Aligned_cols=283 Identities=43% Similarity=0.808 Sum_probs=255.5
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeE
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAI 157 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~ 157 (471)
..+||.|+.+..|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 458999999999999999999999999999999999999999996 4469889999999999999999999999999999
Q ss_pred EeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCC
Q 012110 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQ 237 (471)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~ 237 (471)
+|.+++|+|++++..++++.||++....+..|....++||||||++..+.....+++++|+++|+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999988765345556789999999998877777889999999999999999999987532
Q ss_pred -CCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhC
Q 012110 238 -EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIG 316 (471)
Q Consensus 238 -~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~ 316 (471)
....|+|+|||+|+++|.|+++|+|+.++++|.|.+++|.|+++.+. ..+..++|||||+++++|++++++|+++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998764 357899999999999999999999999998
Q ss_pred CcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHH
Q 012110 317 ASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVV 396 (471)
Q Consensus 317 a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (471)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 65
Q ss_pred HHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCccc
Q 012110 397 WMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPY 469 (471)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
....+.|.++|+....+|.|+|+|+|++|+|+|++|+++.. ..|+
T Consensus 242 --------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~ 286 (329)
T 1dpj_A 242 --------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS--GSCI 286 (329)
T ss_dssp --------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET--TEEE
T ss_pred --------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC--CEEE
Confidence 12457899999998899999999999999999999999865 5687
No 8
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.3e-53 Score=427.98 Aligned_cols=288 Identities=42% Similarity=0.824 Sum_probs=259.0
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCC-CcccCCCCCCCCCCCCcceeCCeeEEEEecc
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGT 154 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~ 154 (471)
+...+||.|+.|..|+++|+||||||++.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 85 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYST 85 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECC
Confidence 567899999999999999999999999999999999999999999952 3469889999999999999999999999999
Q ss_pred CeEEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecC
Q 012110 155 GAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNR 234 (471)
Q Consensus 155 gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~ 234 (471)
|+++|.+++|+|++++..+ ++.||++.......+....++||||||++..+.....+++++|++||.|++++||+||.+
T Consensus 86 gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~ 164 (341)
T 3k1w_A 86 GTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNR 164 (341)
T ss_dssp EEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECC
T ss_pred cEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeC
Confidence 9999999999999999999 999999998765445566789999999998887778889999999999999999999998
Q ss_pred CC--CCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHH
Q 012110 235 NQ--QEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMIN 312 (471)
Q Consensus 235 ~~--~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~ 312 (471)
.. +....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|++..+. +..+..++|||||+++++|++++++|+
T Consensus 165 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~ 243 (341)
T 3k1w_A 165 DSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLM 243 (341)
T ss_dssp CC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHH
T ss_pred CCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHHH
Confidence 64 223489999999999999999999999999999999999999998653 456789999999999999999999999
Q ss_pred HHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhH
Q 012110 313 HAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACE 392 (471)
Q Consensus 313 ~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (471)
+++++..
T Consensus 244 ~~~~~~~------------------------------------------------------------------------- 250 (341)
T 3k1w_A 244 EALGAKK------------------------------------------------------------------------- 250 (341)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHcCCee-------------------------------------------------------------------------
Confidence 9998761
Q ss_pred HHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 393 MAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
...| |.++|+....+|.|+|+|+|++|+|+|++|+++... +..|+.
T Consensus 251 -------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~~ 298 (341)
T 3k1w_A 251 -------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTL 298 (341)
T ss_dssp -------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEEB
T ss_pred -------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEEe
Confidence 1246 999999988999999999999999999999998654 567874
No 9
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=4.3e-53 Score=425.30 Aligned_cols=283 Identities=45% Similarity=0.851 Sum_probs=255.7
Q ss_pred eeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEE
Q 012110 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (471)
Q Consensus 79 ~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~ 158 (471)
.+||. +.+..|+++|.||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 46888 88999999999999999999999999999999999995 45698899999999999999999999999999999
Q ss_pred eEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCC
Q 012110 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (471)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~ 238 (471)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|+++|.|++++||+||.+....
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~ 161 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGS 161 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSS
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCC
Confidence 99999999999999999999999887665555667899999999988877788899999999999999999999986422
Q ss_pred CCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCc
Q 012110 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (471)
Q Consensus 239 ~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~ 318 (471)
..|+|+|||+|+++|.|+++|+|+.++++|.|.+++|+|+++.+..+..+..++|||||+++++|++++++|++++++.
T Consensus 162 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 162 -SGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp -EEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred -CCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 3799999999999999999999999999999999999999987643456789999999999999999999999999876
Q ss_pred ceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHH
Q 012110 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (471)
Q Consensus 319 ~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (471)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
...|.|.++|+....+|.|+|+|+|++|+|+|++|+++.. + .|+.
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~ 286 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN-G-YCTV 286 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS-S-CEEE
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC-C-EEEE
Confidence 1346789999988899999999999999999999999976 4 8873
No 10
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-52 Score=421.56 Aligned_cols=280 Identities=42% Similarity=0.757 Sum_probs=254.5
Q ss_pred eeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEE
Q 012110 79 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIA 158 (471)
Q Consensus 79 ~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~ 158 (471)
.+||.|+.+..|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|+++
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 47999999999999999999999999999999999999999995 45798899999999999999999999999999999
Q ss_pred eEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCC
Q 012110 159 GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (471)
Q Consensus 159 G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~ 238 (471)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|+++|.|++++||+||.+...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~- 160 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA- 160 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTC-
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCC-
Confidence 9999999999999999999999998766555566789999999998877777889999999999999999999998632
Q ss_pred CCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCc
Q 012110 239 DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (471)
Q Consensus 239 ~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~ 318 (471)
..|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|+|+++.+. +.. ..++|||||+++++|++++++|++++++.
T Consensus 161 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 161 -NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -SCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -CCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 389999999999999999999999988999999999999998753 334 89999999999999999999999999754
Q ss_pred ceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHH
Q 012110 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWM 398 (471)
Q Consensus 319 ~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (471)
.
T Consensus 238 -~------------------------------------------------------------------------------ 238 (324)
T 1am5_A 238 -E------------------------------------------------------------------------------ 238 (324)
T ss_dssp -E------------------------------------------------------------------------------
T ss_pred -c------------------------------------------------------------------------------
Confidence 1
Q ss_pred HHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 399 QNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
..|.|.++|+....+|.|+|+|+|++|+|+|++|+++. +..|+.
T Consensus 239 --------------------------~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~ 282 (324)
T 1am5_A 239 --------------------------NQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD--QAFCTS 282 (324)
T ss_dssp --------------------------CCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES--SSCEEE
T ss_pred --------------------------cCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC--CCeEEE
Confidence 24668899999889999999999999999999999987 567873
No 11
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.5e-52 Score=426.76 Aligned_cols=279 Identities=33% Similarity=0.661 Sum_probs=253.2
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
....+||.|+.+..|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 44568999999999999999999999999999999999999999995 56799999999999999999999999999999
Q ss_pred eEEeEEEEEEEEEeeEeeccceEEEEEe----cCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEE
Q 012110 156 AIAGFFSYDSVKVGDLVVKDQEFIEATR----EPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFW 231 (471)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~a~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~ 231 (471)
+++|.+++|+|++|+..+++ .||++.. .+ .|....++||||||++..+....++++++|++||.|++++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 43 45556789999999998887778899999999999999999999
Q ss_pred ecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHH
Q 012110 232 LNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (471)
Q Consensus 232 L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i 311 (471)
|.+.. ...|+|+|||+|+++|.|+++|+|+.+.++|.|.++ |.|+++.+ .+..++|||||+++++|++++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 99863 258999999999999999999999999999999999 99999876 467899999999999999999999
Q ss_pred HHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchh
Q 012110 312 NHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSAC 391 (471)
Q Consensus 312 ~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (471)
++++++..
T Consensus 279 ~~~~~~~~------------------------------------------------------------------------ 286 (375)
T 1miq_A 279 FANLNVIK------------------------------------------------------------------------ 286 (375)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHhCCcc------------------------------------------------------------------------
Confidence 99998751
Q ss_pred HHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCccc
Q 012110 392 EMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPY 469 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 469 (471)
+...|.|.++|+. ..+|.|+|+|+|++|+|+|++|+++..+ ...|+
T Consensus 287 -------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~ 334 (375)
T 1miq_A 287 -------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCM 334 (375)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEE
T ss_pred -------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 2245779999998 7899999999999999999999999763 35787
No 12
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.1e-52 Score=435.63 Aligned_cols=280 Identities=30% Similarity=0.542 Sum_probs=253.8
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
....+||.|+.+..|+++|+||||||++.|++||||+++||++..|. ...|..++.|+|++|+|++..++.|.+.|++|
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdG 203 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSKAG 203 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECSSE
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEECCC
Confidence 56778999999999999999999999999999999999999999995 56899999999999999999999999999999
Q ss_pred eEEeEEEEEEEEEeeEeeccceEEEEEe----cCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEE
Q 012110 156 AIAGFFSYDSVKVGDLVVKDQEFIEATR----EPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFW 231 (471)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~a~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~ 231 (471)
+++|.++.|+|++|+..++ +.||++.. .++ +....++||||||++..+....++++++|+++|.|++++||+|
T Consensus 204 s~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~ 280 (451)
T 3qvc_A 204 TISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIY 280 (451)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEE
T ss_pred EEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEE
Confidence 9999999999999999999 99999988 544 5556789999999998887778899999999999999999999
Q ss_pred ecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHH
Q 012110 232 LNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (471)
Q Consensus 232 L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i 311 (471)
|++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.|++. +.....+++||||+++++|++++++|
T Consensus 281 L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~~i 353 (451)
T 3qvc_A 281 LPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFNQF 353 (451)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHHHH
T ss_pred EcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHHHH
Confidence 99873 248999999999999999999999999999999999 999998 34578999999999999999999999
Q ss_pred HHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchh
Q 012110 312 NHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSAC 391 (471)
Q Consensus 312 ~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (471)
++++++..
T Consensus 354 ~~~i~a~~------------------------------------------------------------------------ 361 (451)
T 3qvc_A 354 VESASVFK------------------------------------------------------------------------ 361 (451)
T ss_dssp HTTTTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99998761
Q ss_pred HHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCccc
Q 012110 392 EMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPY 469 (471)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 469 (471)
.+..|.|.++|+ ...+|.|+|+|+|++++|+|++|+.+..+ +..|+
T Consensus 362 -------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~C~ 409 (451)
T 3qvc_A 362 -------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSALCM 409 (451)
T ss_dssp -------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTEEE
T ss_pred -------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCeEE
Confidence 123578999999 88999999999999999999999998763 56787
Q ss_pred C
Q 012110 470 S 470 (471)
Q Consensus 470 ~ 470 (471)
.
T Consensus 410 ~ 410 (451)
T 3qvc_A 410 L 410 (451)
T ss_dssp E
T ss_pred E
Confidence 4
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7.3e-52 Score=431.23 Aligned_cols=281 Identities=32% Similarity=0.607 Sum_probs=253.8
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
....+||.|+.+..|+++|+||||||++.|+|||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 34678999999999999999999999999999999999999999995 56899999999999999999999999999999
Q ss_pred eEEeEEEEEEEEEeeEeeccceEEEEEecC--CccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEec
Q 012110 156 AIAGFFSYDSVKVGDLVVKDQEFIEATREP--GVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLN 233 (471)
Q Consensus 156 s~~G~~~~D~v~ig~~~i~~~~fg~a~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~ 233 (471)
+++|.+++|+|++|+.+++ +.||++.... +..+....++||||||++..+....+|++++|++||.|++++||+||.
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544555678999999999888777889999999999999999999999
Q ss_pred CCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHH
Q 012110 234 RNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINH 313 (471)
Q Consensus 234 ~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~ 313 (471)
+.+ ..+|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.|++ .+ . .+..+|+||||+++++|++++++|++
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 3 56889999999999999999999999
Q ss_pred HhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHH
Q 012110 314 AIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEM 393 (471)
Q Consensus 314 ~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (471)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 99765
Q ss_pred HHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCC-CeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 394 AVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG-ESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
+...| .|.++|+. ..+|.|+|+|+|++|+|+|++|+++... ...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 12345 79999997 7899999999999999999999999764 357873
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.6e-51 Score=418.90 Aligned_cols=288 Identities=30% Similarity=0.466 Sum_probs=255.7
Q ss_pred CCcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEecc
Q 012110 75 EDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGT 154 (471)
Q Consensus 75 ~~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~ 154 (471)
+....+||.|+.+..|+++|+||||+|++.|+|||||+++||++..|.....|..++.|+|++|+||+..++.|.+.|++
T Consensus 5 g~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 84 (361)
T 1mpp_A 5 GSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGT 84 (361)
T ss_dssp CCEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSS
T ss_pred CccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECC
Confidence 35667899999999999999999999999999999999999999999423479989999999999999999999999999
Q ss_pred CeEEeEEEEEEEEEeeEeeccceEEEEEecCC-----ccccccccceEEcCCCCcccCCC------CCchHHHHHHcCCC
Q 012110 155 GAIAGFFSYDSVKVGDLVVKDQEFIEATREPG-----VTFMVAKFDGILGLGFQEISVGN------AVPVWYNMVKQGLI 223 (471)
Q Consensus 155 gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~l~~L~~~g~I 223 (471)
|+++|.+++|+|++++..++++.||++....+ ..+....++||||||++..+... .++++++|+++|.|
T Consensus 85 Gs~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i 164 (361)
T 1mpp_A 85 GGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLI 164 (361)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSS
T ss_pred ceEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCC
Confidence 99999999999999999999999999998765 34555678999999998776533 78899999999999
Q ss_pred CCCeEEEEecCCCCCCCCceEEECccCCCCCccceeEEeccccc----ceEEEEeeEEECCeecccccCCceEE-EcCCc
Q 012110 224 QDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKG----YWQFNMGDVLIGGKPTGYCAGGCSAI-ADSGT 298 (471)
Q Consensus 224 ~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~----~W~v~l~~i~vgg~~i~~~~~~~~ai-iDTGt 298 (471)
++++||+||.+. ...|+|+|||+|+++|.|+++|+|+.+.. +|.|.+++|.|+++.+. +..+..+| |||||
T Consensus 165 ~~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGT 240 (361)
T 1mpp_A 165 SSPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGT 240 (361)
T ss_dssp SSSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTC
T ss_pred CCcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCC
Confidence 999999999985 23899999999999999999999997765 99999999999998764 33567899 99999
Q ss_pred ccccccHHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCcc
Q 012110 299 SLLAGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDK 378 (471)
Q Consensus 299 t~i~lP~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~ 378 (471)
+++++|++++++|++++++..
T Consensus 241 t~~~lP~~~~~~l~~~~~~~~----------------------------------------------------------- 261 (361)
T 1mpp_A 241 NFFIAPSSFAEKVVKAALPDA----------------------------------------------------------- 261 (361)
T ss_dssp CSEEEEHHHHHHHHHHHCTTC-----------------------------------------------------------
T ss_pred CceeCCHHHHHHHHHHhCCcc-----------------------------------------------------------
Confidence 999999999999999998751
Q ss_pred ccCcCCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCC-CcEEEEE--C-----CEE
Q 012110 379 SSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSM-PIVSFTI--G-----GKV 450 (471)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-p~~~~~~--~-----~~~ 450 (471)
+...|.|.++|+....+ |.|+|+| + |++
T Consensus 262 --------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 262 --------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp --------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEE
T ss_pred --------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeE
Confidence 11356789999988888 9999999 8 999
Q ss_pred EEeCCCcceEEccC-CCccc
Q 012110 451 FDLSPEEDLGRRLH-GSLPY 469 (471)
Q Consensus 451 ~~~~~~~~~~~~~~-~~~~~ 469 (471)
|+|+|++|+++... +..|+
T Consensus 298 ~~i~~~~y~~~~~~~~~~C~ 317 (361)
T 1mpp_A 298 VSVPISKMLLPVDKSGETCM 317 (361)
T ss_dssp EEEEGGGGEEECSSSSCEEE
T ss_pred EEECHHHhEEecCCCCCeeE
Confidence 99999999999764 45787
No 15
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.2e-51 Score=413.00 Aligned_cols=281 Identities=30% Similarity=0.494 Sum_probs=251.7
Q ss_pred CcceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCccc--CCCCCCCCCCCCcceeCCeeEEEEec
Q 012110 76 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVAC--YFHSKYKSSQSSTYKKNGESASIQYG 153 (471)
Q Consensus 76 ~~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C--~~~~~y~~~~Sst~~~~~~~~~~~Y~ 153 (471)
....+||.|+.+..|+++|+|| +|++.|+|||||+++||++..|. ...| ..++.|+|++| ||+..++.|.+.|+
T Consensus 5 ~~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg 80 (330)
T 1yg9_A 5 VPLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFD 80 (330)
T ss_dssp CCSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETT
T ss_pred eeeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEEC
Confidence 3445799999999999999999 89999999999999999999995 4579 88899999999 99999999999999
Q ss_pred cCeEEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCccc-CCCCCchHHHHHHcCCCCCCeEEEEe
Q 012110 154 TGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEIS-VGNAVPVWYNMVKQGLIQDPVFSFWL 232 (471)
Q Consensus 154 ~gs~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~l~~L~~~g~I~~~~Fsl~L 232 (471)
+|+++|.+++|+|++|+..++++.||++... +..|....++||||||++..+ ....++++++|+++|.| +++||+||
T Consensus 81 ~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l 158 (330)
T 1yg9_A 81 TGSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHH 158 (330)
T ss_dssp TEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEE
T ss_pred CceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEE
Confidence 9999999999999999999999999999987 434555678999999999887 66778899999999999 99999999
Q ss_pred cCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHH
Q 012110 233 NRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMIN 312 (471)
Q Consensus 233 ~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~ 312 (471)
.+..+....|+|+|||+|+++|.|+++|+|+.++++|.|.+++|.|+++.+. ..+..+|+||||+++++|++++++|+
T Consensus 159 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~ 236 (330)
T 1yg9_A 159 ARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPIN 236 (330)
T ss_dssp EECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHH
T ss_pred cCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHH
Confidence 9864333489999999999999999999999999999999999999998764 46789999999999999999999999
Q ss_pred HHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhH
Q 012110 313 HAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACE 392 (471)
Q Consensus 313 ~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (471)
+++++..
T Consensus 237 ~~~~~~~------------------------------------------------------------------------- 243 (330)
T 1yg9_A 237 EAIGCVV------------------------------------------------------------------------- 243 (330)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHhCCcc-------------------------------------------------------------------------
Confidence 9998761
Q ss_pred HHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCC--Ce-eEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCccc
Q 012110 393 MAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMG--ES-AVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPY 469 (471)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
...| .| .++|+....+|.|+|+|+|++|+|+|++|+++. +..||
T Consensus 244 -------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~ 290 (330)
T 1yg9_A 244 -------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN--GNLCY 290 (330)
T ss_dssp -------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE--TTEEE
T ss_pred -------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC--CCcEE
Confidence 1234 68 899998889999999999999999999999987 56787
Q ss_pred C
Q 012110 470 S 470 (471)
Q Consensus 470 ~ 470 (471)
.
T Consensus 291 ~ 291 (330)
T 1yg9_A 291 S 291 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=6.8e-49 Score=394.07 Aligned_cols=274 Identities=36% Similarity=0.652 Sum_probs=239.3
Q ss_pred ecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe-EEeEEE
Q 012110 84 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFS 162 (471)
Q Consensus 84 n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs-~~G~~~ 162 (471)
+..+..|+++|+||||+|++.|+|||||+++||++..|..+ |..++.|+|++|+||+..++.|.+.|++|+ ++|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999743 677889999999999999999999999998 899999
Q ss_pred EEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC-CCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCC
Q 012110 163 YDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV-GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (471)
Q Consensus 163 ~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~ 241 (471)
+|+|++++..++++.||++....+ .|....++||||||++..+. ...++++++|+++|+|++++||+||.+..+ ...
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~-~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~-~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAA-SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKN-GGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECH-HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGG-TCC
T ss_pred EEEEEECCEEECcEEEEEEeccCc-ccccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCC-CCC
Confidence 999999999999999999988654 25455689999999998764 356789999999999999999999976421 248
Q ss_pred ceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcce
Q 012110 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGV 320 (471)
Q Consensus 242 G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~ 320 (471)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|++ .+ +..+..++|||||+++++|+++++++.+++.+.-
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~- 242 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGASD- 242 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEE-
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhccc-
Confidence 99999999999999999999996 5789999999999999 33 4567899999999999999999999999997650
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHH
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQN 400 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (471)
T Consensus 243 -------------------------------------------------------------------------------- 242 (325)
T 2apr_A 243 -------------------------------------------------------------------------------- 242 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 401 QLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
+ ..+.|.++|+. ..+|.|+|+|+|.+++|++++|+++.. +..|+.
T Consensus 243 ----------------------~-~~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~ 287 (325)
T 2apr_A 243 ----------------------N-GDGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF-QGQCIA 287 (325)
T ss_dssp ----------------------C-SSSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE-TTEEEE
T ss_pred ----------------------C-CCCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC-CCeEEE
Confidence 1 11668999985 348999999998999999999998765 667874
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.9e-48 Score=391.47 Aligned_cols=274 Identities=29% Similarity=0.448 Sum_probs=236.6
Q ss_pred ecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCccee-CCeeEEEEeccCe-EEeEE
Q 012110 84 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKK-NGESASIQYGTGA-IAGFF 161 (471)
Q Consensus 84 n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~gs-~~G~~ 161 (471)
++.+..|+++|+||||+|++.|+|||||+++||++..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ ++|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345789999999999999999999999999999999996 33466788999999999998 6899999999998 89999
Q ss_pred EEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC---CCCCchHHHHHHcCCCCCCeEEEEecCCCCC
Q 012110 162 SYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQE 238 (471)
Q Consensus 162 ~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~ 238 (471)
++|+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |++++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999988654322235779999999987764 2467899999986 8999999999874
Q ss_pred CCCceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCC
Q 012110 239 DEGGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGA 317 (471)
Q Consensus 239 ~~~G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a 317 (471)
..|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+ +..+..+||||||+++++|++++++|++++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 3899999999999999999999996 5789999999999999876 35678999999999999999999999999843
Q ss_pred cceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHH
Q 012110 318 SGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVW 397 (471)
Q Consensus 318 ~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (471)
...
T Consensus 242 a~~----------------------------------------------------------------------------- 244 (329)
T 3c9x_A 242 AQY----------------------------------------------------------------------------- 244 (329)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred cEE-----------------------------------------------------------------------------
Confidence 310
Q ss_pred HHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 398 MQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
....+.|.++|+ ..+|.|+|+|+|++++|++++|+++..+ ...|+.
T Consensus 245 -------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~ 292 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFG 292 (329)
T ss_dssp -------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEE
T ss_pred -------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEE
Confidence 113567899998 5799999999999999999999988643 367874
No 18
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.5e-48 Score=374.89 Aligned_cols=238 Identities=68% Similarity=1.173 Sum_probs=217.5
Q ss_pred cceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe
Q 012110 77 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA 156 (471)
Q Consensus 77 ~~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs 156 (471)
...+||.|+.+.+|+++|.||||+|++.|+|||||+++||++..|..+..|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 34689999999999999999999999999999999999999999964567998999999999999999999999999999
Q ss_pred EEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCC
Q 012110 157 IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQ 236 (471)
Q Consensus 157 ~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~ 236 (471)
++|.++.|+|++++..++++.||++....+..|....++||||||++..+ .|++++|+++|.|++++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876544556678999999998766 56889999999999999999999864
Q ss_pred CCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhC
Q 012110 237 QEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIG 316 (471)
Q Consensus 237 ~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~ 316 (471)
+....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.++..+..+||||||+++++|++++++|+++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998899999999999999987666677899999999999999999999999998
Q ss_pred Cc
Q 012110 317 AS 318 (471)
Q Consensus 317 a~ 318 (471)
|.
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 19
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-48 Score=392.34 Aligned_cols=274 Identities=28% Similarity=0.422 Sum_probs=240.7
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCC--CCCC------CcccCCCCCCCCCCCCcceeCCeeEE
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST--NCYF------SVACYFHSKYKSSQSSTYKKNGESAS 149 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~Sst~~~~~~~~~ 149 (471)
..+||.|. +..|+++|+||||+|++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 789999999999999999999999999999976 6753 23688889999999999999999999
Q ss_pred EEeccCe-EEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC--CCCCchHHHHHHcCCCCCC
Q 012110 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDP 226 (471)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~l~~L~~~g~I~~~ 226 (471)
+.|++|+ ++|.+++|+|++++..++++.||++.... .++||||||++..+. ...++++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998753 459999999987654 2456799999999999999
Q ss_pred eEEEEecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHH
Q 012110 227 VFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTT 306 (471)
Q Consensus 227 ~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~ 306 (471)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. .+..+++||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 2489999999999999999999999988999999999999998774 3478999999999999999
Q ss_pred HHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCcc
Q 012110 307 VITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNA 386 (471)
Q Consensus 307 ~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (471)
++++|++++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999998761
Q ss_pred ccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCee-EecccCCCCCcEEEEE-CCEEEEeCCCcceEEccC
Q 012110 387 MCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESA-VDCGKLSSMPIVSFTI-GGKVFDLSPEEDLGRRLH 464 (471)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~ 464 (471)
....+.|. ++|+. +|.|+|+| +|++++|+|++|+++..+
T Consensus 243 ------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSCC---CSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCCC---CCceEEEEcCCcEEEECHHHheeecCC
Confidence 01234677 89964 89999999 799999999999999776
Q ss_pred CCcccC
Q 012110 465 GSLPYS 470 (471)
Q Consensus 465 ~~~~~~ 470 (471)
+..|+.
T Consensus 284 ~~~C~~ 289 (334)
T 1j71_A 284 SSICYF 289 (334)
T ss_dssp SSCEEE
T ss_pred CCeeEE
Confidence 666874
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.5e-48 Score=392.07 Aligned_cols=277 Identities=29% Similarity=0.432 Sum_probs=241.7
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCC--CCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN--CYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG 155 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~--C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g 155 (471)
..+||.|. +..|+++|+||||||++.|+|||||+++||++.. |..+..|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 45788886 5789999999999999999999999999999764 75445899899999999999999999999999999
Q ss_pred -eEEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC----------CCCCchHHHHHHcCCCC
Q 012110 156 -AIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV----------GNAVPVWYNMVKQGLIQ 224 (471)
Q Consensus 156 -s~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~l~~L~~~g~I~ 224 (471)
.++|.+++|+|+|++..++++.||++..... .+||||||++..+. ...++++++|+++|.|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987654 49999999987653 33567999999999999
Q ss_pred CCeEEEEecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCccccccc
Q 012110 225 DPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGP 304 (471)
Q Consensus 225 ~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP 304 (471)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+..+.+|.|.+++|.|+++.+. .+..++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFS---FGDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEE---EEEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeec---CCccEEEeCCCCCEecC
Confidence 999999998763 2489999999999999999999999998999999999999998875 24789999999999999
Q ss_pred HHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCC
Q 012110 305 TTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLN 384 (471)
Q Consensus 305 ~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (471)
++++++|++++++...
T Consensus 230 ~~~~~~i~~~~~~~~~---------------------------------------------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARLV---------------------------------------------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEEE----------------------------------------------------------------
T ss_pred HHHHHHHHHHcCCEEc----------------------------------------------------------------
Confidence 9999999999987610
Q ss_pred ccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEE-CCEEEEeCCCcceEEcc
Q 012110 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTI-GGKVFDLSPEEDLGRRL 463 (471)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~ 463 (471)
..+...+.|.++|+. ..+|.|+|+| +|++++|++++|+++..
T Consensus 246 ------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 246 ------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp ------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred ------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 001135678999986 5699999999 58999999999999864
Q ss_pred CCCccc
Q 012110 464 HGSLPY 469 (471)
Q Consensus 464 ~~~~~~ 469 (471)
...|+
T Consensus 289 -~~~C~ 293 (339)
T 3fv3_A 289 -DGTCL 293 (339)
T ss_dssp -SSCEE
T ss_pred -CCeEE
Confidence 35686
No 21
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.3e-48 Score=390.85 Aligned_cols=271 Identities=28% Similarity=0.467 Sum_probs=233.8
Q ss_pred CCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCccee-CCeeEEEEeccCe-EEeEEEE
Q 012110 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKK-NGESASIQYGTGA-IAGFFSY 163 (471)
Q Consensus 86 ~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~-~~~~~~~~Y~~gs-~~G~~~~ 163 (471)
.+..|+++|+||||+|++.|+|||||+++||++..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ ++|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 4788999999999999999999999999999999996 3345 688999999999998 6889999999998 8999999
Q ss_pred EEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC---CCCCchHHHHHHcCCCCCCeEEEEecCCCCCCC
Q 012110 164 DSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE 240 (471)
Q Consensus 164 D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~ 240 (471)
|+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |++++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998654322235679999999988764 2467899999987 8999999999874 3
Q ss_pred CceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcc
Q 012110 241 GGEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASG 319 (471)
Q Consensus 241 ~G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~ 319 (471)
.|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|+++.+. ..+..+||||||+++++|++++++|++++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999996 57899999999999998753 456789999999999999999999999984331
Q ss_pred eeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHH
Q 012110 320 VVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQ 399 (471)
Q Consensus 320 ~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (471)
+
T Consensus 243 ~------------------------------------------------------------------------------- 243 (329)
T 1oew_A 243 S------------------------------------------------------------------------------- 243 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred E-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 400 NQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
....+.|.++|+ ..+|.|+|+|||++|+|++++|+++..+ ...|+.
T Consensus 244 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~ 291 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFG 291 (329)
T ss_dssp -----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEE
T ss_pred -----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEE
Confidence 113567899998 5799999999999999999999988633 367874
No 22
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1e-47 Score=388.06 Aligned_cols=228 Identities=30% Similarity=0.510 Sum_probs=204.2
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCC--CCCC------CcccCCCCCCCCCCCCcceeCCeeEE
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST--NCYF------SVACYFHSKYKSSQSSTYKKNGESAS 149 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~Sst~~~~~~~~~ 149 (471)
..+||.| .+..|+++|+||||+|++.|+|||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFD 81 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEE
Confidence 4578888 4789999999999999999999999999999866 6752 24688889999999999999999999
Q ss_pred EEeccCe-EEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCC--CCCchHHHHHHcCCCCCC
Q 012110 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDP 226 (471)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~l~~L~~~g~I~~~ 226 (471)
+.|++|+ ++|.+++|+|++++..++++.||++.... .++||||||++..+.. .+++++++|+++|.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (342)
T 2qzx_A 82 IKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKA 154 (342)
T ss_dssp EECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSS
T ss_pred EEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCcc
Confidence 9999998 68999999999999999999999998753 4589999999876542 356799999999999999
Q ss_pred eEEEEecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHH
Q 012110 227 VFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTT 306 (471)
Q Consensus 227 ~Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~ 306 (471)
+||+||.+.. ...|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~~ 229 (342)
T 2qzx_A 155 AYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTRS 229 (342)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCHH
Confidence 9999998752 2489999999999999999999999988899999999999998774 3478999999999999999
Q ss_pred HHHHHHHHhCCc
Q 012110 307 VITMINHAIGAS 318 (471)
Q Consensus 307 ~~~~i~~~i~a~ 318 (471)
++++|++++++.
T Consensus 230 ~~~~l~~~~~~~ 241 (342)
T 2qzx_A 230 IVRNILYAIGAQ 241 (342)
T ss_dssp HHHHHHHHHTCE
T ss_pred HHHHHHHHhCCe
Confidence 999999999876
No 23
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=4.8e-47 Score=383.00 Aligned_cols=229 Identities=31% Similarity=0.513 Sum_probs=205.0
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCC--CC------CCcccCCCCCCCCCCCCcceeCCeeEE
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN--CY------FSVACYFHSKYKSSQSSTYKKNGESAS 149 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~--C~------~~~~C~~~~~y~~~~Sst~~~~~~~~~ 149 (471)
..++|.|. +..|+++|+||||||++.|++||||+++||++.. |. ....|..++.|+|++|+|++..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 35677775 6789999999999999999999999999998764 63 235798899999999999999999999
Q ss_pred EEeccCe-EEeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccCC-CCCchHHHHHHcCCCCCCe
Q 012110 150 IQYGTGA-IAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG-NAVPVWYNMVKQGLIQDPV 227 (471)
Q Consensus 150 ~~Y~~gs-~~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~l~~L~~~g~I~~~~ 227 (471)
+.|++|+ ++|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ..++++++|+++|.|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998754 3599999999876543 4567999999999999999
Q ss_pred EEEEecCCCCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHH
Q 012110 228 FSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (471)
Q Consensus 228 Fsl~L~~~~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~ 307 (471)
||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.|+++.+. ..+..++|||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~--~~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTIN--TDNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE--EEEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEec--CCCceEEEeCCCCCeecCHHH
Confidence 999998753 2489999999999999999999999998899999999999999875 235789999999999999999
Q ss_pred HHHHHHHhCCc
Q 012110 308 ITMINHAIGAS 318 (471)
Q Consensus 308 ~~~i~~~i~a~ 318 (471)
+++|++++++.
T Consensus 231 ~~~i~~~~~~~ 241 (342)
T 3pvk_A 231 ADQIIKAFNGK 241 (342)
T ss_dssp HHHHHHHTTCE
T ss_pred HHHHHHHcCCe
Confidence 99999999876
No 24
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.7e-47 Score=382.13 Aligned_cols=268 Identities=27% Similarity=0.416 Sum_probs=233.4
Q ss_pred CCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe-EEeEEEEE
Q 012110 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFSYD 164 (471)
Q Consensus 86 ~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs-~~G~~~~D 164 (471)
.+..|+++|+|| ||++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 478899999999 79999999999999999999996 3457788999999999 7767899999999999 89999999
Q ss_pred EEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC---CCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCC
Q 012110 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (471)
Q Consensus 165 ~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~ 241 (471)
+|++++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998755322235679999999998765 3567899999987 8999999999874 38
Q ss_pred ceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcce
Q 012110 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGV 320 (471)
Q Consensus 242 G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~ 320 (471)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|++ .+ +..+..+|+||||+++++|++++++|++++.+...
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~ 239 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGASY 239 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEE
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEE
Confidence 99999999999999999999996 6789999999999999 44 45678999999999999999999999999943310
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHH
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQN 400 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (471)
T Consensus 240 -------------------------------------------------------------------------------- 239 (323)
T 1izd_A 240 -------------------------------------------------------------------------------- 239 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCCCcccC
Q 012110 401 QLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (471)
....|.|.++|+ ..+|.|+|+|||++|+|++++|+++..++..|+.
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~ 285 (323)
T 1izd_A 240 ----------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADVGNGQTFG 285 (323)
T ss_dssp ----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEECSTTEEEE
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecCCCCeEEE
Confidence 123577999998 5899999999999999999999998755677874
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.3e-46 Score=377.62 Aligned_cols=268 Identities=28% Similarity=0.441 Sum_probs=233.2
Q ss_pred CCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe-EEeEEEEE
Q 012110 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFSYD 164 (471)
Q Consensus 86 ~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs-~~G~~~~D 164 (471)
.+..|+++|+|| +|++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 478899999999 89999999999999999999996 3357778999999999 7767899999999998 89999999
Q ss_pred EEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC---CCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCC
Q 012110 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (471)
Q Consensus 165 ~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~ 241 (471)
+|++++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998754322235779999999988764 3567899999987 8899999999874 28
Q ss_pred ceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHh-CCcc
Q 012110 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAI-GASG 319 (471)
Q Consensus 242 G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i-~a~~ 319 (471)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|.|+++.+ +..+..+||||||+++++|++++++|++++ ++..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~ 239 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQE 239 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBC
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 5789999999999999876 356789999999999999999999999999 4440
Q ss_pred eeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHH
Q 012110 320 VVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQ 399 (471)
Q Consensus 320 ~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (471)
T Consensus 240 -------------------------------------------------------------------------------- 239 (325)
T 1ibq_A 240 -------------------------------------------------------------------------------- 239 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC-C-CcccC
Q 012110 400 NQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH-G-SLPYS 470 (471)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 470 (471)
....+.|.++|+ ..+|.|+|+|+|++|+|++++|+++..+ + ..|+.
T Consensus 240 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~ 287 (325)
T 1ibq_A 240 -----------------------SYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYG 287 (325)
T ss_dssp -----------------------CSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEE
T ss_pred -----------------------cCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEE
Confidence 123567899998 5799999999999999999999988643 3 67874
No 26
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.6e-47 Score=381.19 Aligned_cols=267 Identities=28% Similarity=0.422 Sum_probs=231.1
Q ss_pred CCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe-EEeEEEEE
Q 012110 86 MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA-IAGFFSYD 164 (471)
Q Consensus 86 ~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs-~~G~~~~D 164 (471)
.+..|+++|+|| +|++.|+|||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ ++|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 478899999999 89999999999999999999996 3457788999999999 7777899999999999 89999999
Q ss_pred EEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC---CCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCC
Q 012110 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV---GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEG 241 (471)
Q Consensus 165 ~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~ 241 (471)
+|++++..++++.||++...++..+....++||||||++..+. ...++++++|+++ |++++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 9999999999999999998654322235779999999988765 2467899999987 8999999999874 38
Q ss_pred ceEEECccCCCCCccceeEEecc-cccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcce
Q 012110 242 GEIVFGGVDPNHYKGKHTYVPVT-QKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGV 320 (471)
Q Consensus 242 G~L~fGgiD~s~~~G~l~~~pv~-~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~ 320 (471)
|+|+|||+|+++|.|+++|+|+. ..++|.|.+++|+|++ + +..+..+||||||+++++|++++++|++++.+...
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~ 238 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQ 238 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEE
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCceE
Confidence 99999999999999999999996 6789999999999999 2 34578999999999999999999999999943310
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHH
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQN 400 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (471)
T Consensus 239 -------------------------------------------------------------------------------- 238 (323)
T 1bxo_A 239 -------------------------------------------------------------------------------- 238 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccCC-CcccC
Q 012110 401 QLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLHG-SLPYS 470 (471)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 470 (471)
....|.|.++|+ ..+|.|+|+|+|++|+|++++|+++..++ ..|+.
T Consensus 239 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~ 285 (323)
T 1bxo_A 239 ----------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLG 285 (323)
T ss_dssp ----------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECSSSSCEEE
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccCCCCeEEE
Confidence 113577999998 58999999999999999999999987543 67874
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=4.3e-47 Score=397.77 Aligned_cols=232 Identities=28% Similarity=0.440 Sum_probs=198.9
Q ss_pred eeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeE
Q 012110 81 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGF 160 (471)
Q Consensus 81 ~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~ 160 (471)
+|.+..+..|+++|+||||+|++.|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|+++|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 56666678999999999999999999999999999999887 5667899999999999999999999999999999
Q ss_pred EEEEEEEEee-Eeec-cceEEEEEecCCccccccccceEEcCCCCcccCC--CCCchHHHHHHcCCCCCCeEEEEecCCC
Q 012110 161 FSYDSVKVGD-LVVK-DQEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRNQ 236 (471)
Q Consensus 161 ~~~D~v~ig~-~~i~-~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~l~~L~~~g~I~~~~Fsl~L~~~~ 236 (471)
+++|+|+|++ ..+. .+.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 2222 3567777655442222357899999999988754 3788999999999997 99999998641
Q ss_pred C--------CCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeeccccc---CCceEEEcCCcccccccH
Q 012110 237 Q--------EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGPT 305 (471)
Q Consensus 237 ~--------~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~---~~~~aiiDTGtt~i~lP~ 305 (471)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ....+||||||+++++|+
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23489999999999999999999999999999999999999999875422 256899999999999999
Q ss_pred HHHHHHHHHhCCc
Q 012110 306 TVITMINHAIGAS 318 (471)
Q Consensus 306 ~~~~~i~~~i~a~ 318 (471)
+++++|++++++.
T Consensus 301 ~~~~~i~~~i~~~ 313 (455)
T 3lpj_A 301 KVFEAAVKSIKAA 313 (455)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999999765
No 28
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.3e-46 Score=374.74 Aligned_cols=261 Identities=28% Similarity=0.527 Sum_probs=227.3
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeE
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAI 157 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~ 157 (471)
..+||.|+ +..|+++|+||||+|++.|+|||||+++||++. +.|+|++|++ ..++.|.+.|++|++
T Consensus 3 ~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 3 GSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGSF 68 (340)
T ss_dssp EEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCEE
T ss_pred ccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcEE
Confidence 46899997 568999999999999999999999999999642 5788887775 457899999999999
Q ss_pred EeEEEEEEEEEeeEeeccceEEEEEecCCccccccccceEEcCCCCcccC--------CCCCchHHHHHHcCCCCCCeEE
Q 012110 158 AGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--------GNAVPVWYNMVKQGLIQDPVFS 229 (471)
Q Consensus 158 ~G~~~~D~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~l~~L~~~g~I~~~~Fs 229 (471)
+|.+++|+|+||+..++++.||++....+ + ..++||||||++..+. ...++++++|+++|+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999988644 2 2579999999988765 3567899999999999999999
Q ss_pred EEecCCC-CCCCCceEEECccCCCCCccceeEEeccc----ccceEEEEeeEEECC-eecccccCCceEEEcCCcccccc
Q 012110 230 FWLNRNQ-QEDEGGEIVFGGVDPNHYKGKHTYVPVTQ----KGYWQFNMGDVLIGG-KPTGYCAGGCSAIADSGTSLLAG 303 (471)
Q Consensus 230 l~L~~~~-~~~~~G~L~fGgiD~s~~~G~l~~~pv~~----~~~W~v~l~~i~vgg-~~i~~~~~~~~aiiDTGtt~i~l 303 (471)
+||.+.. +....|+|+|||+|+++|.|+++|+|+.. .++|.|. ++|.|++ +.+. .+..+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12247999999999999999999999977 7899999 9999998 7653 3468999999999999
Q ss_pred cHHHHHHHHHHhCCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcC
Q 012110 304 PTTVITMINHAIGASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVL 383 (471)
Q Consensus 304 P~~~~~~i~~~i~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (471)
|++++++|.+++++..
T Consensus 221 P~~~~~~l~~~~~a~~---------------------------------------------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAVA---------------------------------------------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCEE----------------------------------------------------------------
T ss_pred CHHHHHHHHHhhCCEE----------------------------------------------------------------
Confidence 9999999999998761
Q ss_pred CccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEcc
Q 012110 384 NNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRL 463 (471)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 463 (471)
....|.|.++|+....+|.|+|+|+|++|+|+|++|+++..
T Consensus 237 ---------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred ---------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccc
Confidence 12357799999988889999999999999999999998754
No 29
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=9.5e-46 Score=379.29 Aligned_cols=232 Identities=30% Similarity=0.484 Sum_probs=196.0
Q ss_pred eeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeE
Q 012110 81 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGF 160 (471)
Q Consensus 81 ~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~ 160 (471)
+|.+..+..|+++|+||||+|++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|+++|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 677777889999999999999999999999999999999885 34 5789999999999999999999999999999
Q ss_pred EEEEEEEEeeEe-ec-cceEEEEEecCCccccccccceEEcCCCCcccC--CCCCchHHHHHHcCCCCCCeEEEEecCC-
Q 012110 161 FSYDSVKVGDLV-VK-DQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRN- 235 (471)
Q Consensus 161 ~~~D~v~ig~~~-i~-~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~l~~L~~~g~I~~~~Fsl~L~~~- 235 (471)
+++|+|+|++.. .. .+.|+++....+.......++||||||++..+. ...++++++|++|+.| +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999997532 22 345676654433211234679999999998765 4577899999999999 89999999852
Q ss_pred ----CCCCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeecccccC---CceEEEcCCcccccccHHHH
Q 012110 236 ----QQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAG---GCSAIADSGTSLLAGPTTVI 308 (471)
Q Consensus 236 ----~~~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~---~~~aiiDTGtt~i~lP~~~~ 308 (471)
......|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+... ...+||||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12235899999999999999999999999999999999999999988754322 46899999999999999999
Q ss_pred HHHHHHhCCc
Q 012110 309 TMINHAIGAS 318 (471)
Q Consensus 309 ~~i~~~i~a~ 318 (471)
++|++++++.
T Consensus 240 ~~l~~~i~~~ 249 (383)
T 2ewy_A 240 DAVVEAVARA 249 (383)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhh
Confidence 9999999765
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.8e-45 Score=379.62 Aligned_cols=231 Identities=28% Similarity=0.442 Sum_probs=194.6
Q ss_pred eeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeEE
Q 012110 82 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGFF 161 (471)
Q Consensus 82 l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~~ 161 (471)
|.+..+..|+++|+||||+|++.|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|+++|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567899999999999999999999999999999887 55678999999999999999999999999999999
Q ss_pred EEEEEEEe-eEeecc-ceEEEEEecCCccccccccceEEcCCCCcccCC--CCCchHHHHHHcCCCCCCeEEEEecCCC-
Q 012110 162 SYDSVKVG-DLVVKD-QEFIEATREPGVTFMVAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRNQ- 236 (471)
Q Consensus 162 ~~D~v~ig-~~~i~~-~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~l~~L~~~g~I~~~~Fsl~L~~~~- 236 (471)
++|+|+|+ +..+.. +.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 444443 346666554432222457899999999988764 3788999999999997 99999997531
Q ss_pred ----C---CCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeeccccc---CCceEEEcCCcccccccHH
Q 012110 237 ----Q---EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGPTT 306 (471)
Q Consensus 237 ----~---~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~---~~~~aiiDTGtt~i~lP~~ 306 (471)
. ....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999876422 2568999999999999999
Q ss_pred HHHHHHHHhCCc
Q 012110 307 VITMINHAIGAS 318 (471)
Q Consensus 307 ~~~~i~~~i~a~ 318 (471)
++++|++++++.
T Consensus 256 ~~~~i~~~i~~~ 267 (402)
T 3vf3_A 256 VFEAAVKSIKAA 267 (402)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 999999999765
No 31
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1e-44 Score=373.15 Aligned_cols=231 Identities=29% Similarity=0.441 Sum_probs=195.9
Q ss_pred eeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCeEEeE
Q 012110 81 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGAIAGF 160 (471)
Q Consensus 81 ~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs~~G~ 160 (471)
+|.+..+..|+++|+||||+|++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|+++|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 566666889999999999999999999999999999999884 33 5889999999999999999999999999999
Q ss_pred EEEEEEEEe-eEeec-cceEEEEEecCCcccc-ccccceEEcCCCCcccCC--CCCchHHHHHHcCCCCCCeEEEEecCC
Q 012110 161 FSYDSVKVG-DLVVK-DQEFIEATREPGVTFM-VAKFDGILGLGFQEISVG--NAVPVWYNMVKQGLIQDPVFSFWLNRN 235 (471)
Q Consensus 161 ~~~D~v~ig-~~~i~-~~~fg~a~~~~~~~~~-~~~~dGIlGLg~~~~s~~--~~~~~l~~L~~~g~I~~~~Fsl~L~~~ 235 (471)
+++|+|+++ +..+. .+.|++...... .|. ...++||||||++..+.. ..++++++|++|+.|+ ++||+||++.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~-~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDK-FFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEES-CSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCc-ccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 55444 255666654333 232 356799999999987653 5778999999999996 8999999864
Q ss_pred CC--------CCCCceEEECccCCCCCccceeEEecccccceEEEEeeEEECCeeccccc---CCceEEEcCCccccccc
Q 012110 236 QQ--------EDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCA---GGCSAIADSGTSLLAGP 304 (471)
Q Consensus 236 ~~--------~~~~G~L~fGgiD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~---~~~~aiiDTGtt~i~lP 304 (471)
.- ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12489999999999999999999999988999999999999998875322 24689999999999999
Q ss_pred HHHHHHHHHHhCCc
Q 012110 305 TTVITMINHAIGAS 318 (471)
Q Consensus 305 ~~~~~~i~~~i~a~ 318 (471)
++++++|++++++.
T Consensus 247 ~~~~~~l~~~i~~~ 260 (395)
T 2qp8_A 247 KKVFEAAVKSIKAA 260 (395)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999999765
No 32
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=9.1e-44 Score=367.02 Aligned_cols=285 Identities=16% Similarity=0.205 Sum_probs=224.3
Q ss_pred cceeeee-ecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCC-----------CCCCCcccCCCCCC------CCCCC
Q 012110 77 TDIVALK-NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPST-----------NCYFSVACYFHSKY------KSSQS 138 (471)
Q Consensus 77 ~~~~~l~-n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~-----------~C~~~~~C~~~~~y------~~~~S 138 (471)
...+||. |+.+..|+++|.||||+|++.|+|||||+++||+|. .|. ...|..++.| ++..|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 4468999 888999999999999999999999999999999999 563 3457777777 55544
Q ss_pred CcceeCCeeEEEEec-cCe-EEeEEEEEEEEEee-----------EeeccceEEEEEecCCccccccccceEEcCCCCcc
Q 012110 139 STYKKNGESASIQYG-TGA-IAGFFSYDSVKVGD-----------LVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEI 205 (471)
Q Consensus 139 st~~~~~~~~~~~Y~-~gs-~~G~~~~D~v~ig~-----------~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~ 205 (471)
+ +....+.|.+.|+ +++ +.|.+++|+|+|++ ..++++.||++.......+....++||||||++..
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4556789999998 555 89999999999998 88999999999876432234457899999999876
Q ss_pred cCCCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECccCCCCC--c-c-----ceeEEecccc--cceEEEEee
Q 012110 206 SVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHY--K-G-----KHTYVPVTQK--GYWQFNMGD 275 (471)
Q Consensus 206 s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~~--~-G-----~l~~~pv~~~--~~W~v~l~~ 275 (471)
+ +..+|. ++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 6 666674 45577899999998852 2489999999 99888 5 6 9999999765 899999999
Q ss_pred EEECCeec-ccccC--------CceEEEcCCcccccccHHHHHHHHHHhCCc-ceeecccchhhcccchhhhhhhhhccC
Q 012110 276 VLIGGKPT-GYCAG--------GCSAIADSGTSLLAGPTTVITMINHAIGAS-GVVSQQCKAVVEQYGQTILDLLLFEAH 345 (471)
Q Consensus 276 i~vgg~~i-~~~~~--------~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~-~~~~~~C~~~~~~fg~~~i~~~~~~~~ 345 (471)
|.|+++.+ ..... ...+||||||+++++|++++++|++++.+. +.+ +. ..
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~------------------~~--~~ 296 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQ------------------AQ--VK 296 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGG------------------GE--EC
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccc------------------cc--cC
Confidence 99999877 43221 235999999999999999999999999432 000 00 00
Q ss_pred cccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCC
Q 012110 346 PKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSP 425 (471)
Q Consensus 346 ~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (471)
+..
T Consensus 297 -----------------------------------------------------------------------------~~~ 299 (403)
T 3aup_A 297 -----------------------------------------------------------------------------SVA 299 (403)
T ss_dssp -----------------------------------------------------------------------------CCT
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 011
Q ss_pred CCCeeEecccCCCCCcEEEEECCE---EEEeCCCcceEEccCCCcccC
Q 012110 426 MGESAVDCGKLSSMPIVSFTIGGK---VFDLSPEEDLGRRLHGSLPYS 470 (471)
Q Consensus 426 ~~~~~~~c~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 470 (471)
...+.++|+.+..+|.|+|+|+|. +|+|+|++|+++..++..|+.
T Consensus 300 ~~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~ 347 (403)
T 3aup_A 300 PFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLG 347 (403)
T ss_dssp TCSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEEC
T ss_pred CCCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEE
Confidence 234788999888999999999774 999999999999776677874
No 33
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=4.2e-43 Score=362.59 Aligned_cols=233 Identities=18% Similarity=0.189 Sum_probs=191.0
Q ss_pred Ccceeeeeec-CCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCC----------CCcccCCCCCCCCCC-----CC
Q 012110 76 DTDIVALKNY-MDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY----------FSVACYFHSKYKSSQ-----SS 139 (471)
Q Consensus 76 ~~~~~~l~n~-~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~----------~~~~C~~~~~y~~~~-----Ss 139 (471)
+...+|++.. .+.+|+++|+||||||+|.|+|||||+++||+|..|. .+..|..++.|++.. ++
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp SEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTTSHHHHHTTCCEEECCSSCCBT
T ss_pred ccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCCcccccccccCCCcccccCCCC
Confidence 4456777754 5789999999999999999999999999999996542 134577777787632 34
Q ss_pred cceeCCeeEEEEec-cCe-EEeEEEEEEEEEe---------eEeeccceEEEEEecCCccccccccceEEcCCCCcccCC
Q 012110 140 TYKKNGESASIQYG-TGA-IAGFFSYDSVKVG---------DLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVG 208 (471)
Q Consensus 140 t~~~~~~~~~~~Y~-~gs-~~G~~~~D~v~ig---------~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~ 208 (471)
++....|.|.+.|+ +++ +.|.+++|+|+|+ ++.++++.|||+....... ....++||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 55666799999994 665 7899999999997 3688899999998753211 23568999999999887
Q ss_pred CCCchHHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECccCCCC-----Cccc-eeEEecccc--------------cc
Q 012110 209 NAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNH-----YKGK-HTYVPVTQK--------------GY 268 (471)
Q Consensus 209 ~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s~-----~~G~-l~~~pv~~~--------------~~ 268 (471)
+..+|..++.| +++||+||.+.. ..+|+|+|||+|..+ |.|+ ++|+|+... .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~~--~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGST--SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSCS--SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCCC--CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 88899999999 999999999852 348999999998753 7888 999999764 69
Q ss_pred eEEEEeeEEECCeeccccc--------CCceEEEcCCcccccccHHHHHHHHHHhCCc
Q 012110 269 WQFNMGDVLIGGKPTGYCA--------GGCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (471)
Q Consensus 269 W~v~l~~i~vgg~~i~~~~--------~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~ 318 (471)
|.|+|++|+||++.+..+. +++.+||||||+++++|++++++|.++|++.
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~ 294 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKE 294 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHH
Confidence 9999999999999876432 3578999999999999999999999999754
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.1e-40 Score=337.28 Aligned_cols=222 Identities=14% Similarity=0.164 Sum_probs=175.3
Q ss_pred eeeee-ecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCC-------CCcccCCCCCCCCCCCCcce-------e
Q 012110 79 IVALK-NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY-------FSVACYFHSKYKSSQSSTYK-------K 143 (471)
Q Consensus 79 ~~~l~-n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~-------~~~~C~~~~~y~~~~Sst~~-------~ 143 (471)
.+|++ ++.+.+|+++|+|||| |+|||||+++||+|..|. .+..|..++.|++..+ ++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~s~~C~~~~~~~~~sc-~~~~~~~~~~~ 77 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGC-PAPSCGSDKHD 77 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTTSHHHHHHHSSCCTTC-CCCCC------
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCCCchhccccCCCCCCC-CCccCCcCcCC
Confidence 46787 6778999999999997 999999999999985442 1335666667876533 322 1
Q ss_pred CCe-eEEEEeccCeE-EeEEEEEEEEEee----Eeeccc----eEEEEEecCCccccccccceEEcCCCCcccCCCCCch
Q 012110 144 NGE-SASIQYGTGAI-AGFFSYDSVKVGD----LVVKDQ----EFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPV 213 (471)
Q Consensus 144 ~~~-~~~~~Y~~gs~-~G~~~~D~v~ig~----~~i~~~----~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~ 213 (471)
..+ .|.+.|++|+. +|.+++|+|++++ ..++++ .||++.......+ ...++||||||++..+ +
T Consensus 78 ~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------~ 150 (381)
T 1t6e_X 78 KPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------L 150 (381)
T ss_dssp CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------H
T ss_pred CccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------h
Confidence 233 59999999994 8999999999985 456665 5699876532222 3578999999998776 7
Q ss_pred HHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECccCCC--CCccceeEEecccc---cceEEEEeeEEECCeecccccC
Q 012110 214 WYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPN--HYKGKHTYVPVTQK---GYWQFNMGDVLIGGKPTGYCAG 288 (471)
Q Consensus 214 l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGgiD~s--~~~G~l~~~pv~~~---~~W~v~l~~i~vgg~~i~~~~~ 288 (471)
..+|..++++ +++||+||.+. .+|+|+|||+|.. +|.|+++|+|+... ++|.|.+++|+|+++.+..+..
T Consensus 151 ~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~~ 225 (381)
T 1t6e_X 151 PAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEG 225 (381)
T ss_dssp HHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCTT
T ss_pred HHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCHH
Confidence 7889998854 89999999875 3899999998765 47999999999753 4677999999999988764432
Q ss_pred ---CceEEEcCCcccccccHHHHHHHHHHhCCc
Q 012110 289 ---GCSAIADSGTSLLAGPTTVITMINHAIGAS 318 (471)
Q Consensus 289 ---~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~ 318 (471)
+..+||||||+++++|++++++|.+++++.
T Consensus 226 ~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~ 258 (381)
T 1t6e_X 226 ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKA 258 (381)
T ss_dssp CSCTTCEEECSSCSSEEECHHHHHHHHHHHHHH
T ss_pred HccCCCEEEECCCccEEeCHHHHHHHHHHHHHh
Confidence 457999999999999999999999998654
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.4e-33 Score=269.11 Aligned_cols=197 Identities=42% Similarity=0.777 Sum_probs=173.3
Q ss_pred eeEeeccceEEEEEecCCccccccccceEEcCCCCcccCCCCCchHHHHHHcCCCCCCeEEEEecCCCCCCCCceEEECc
Q 012110 169 GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGG 248 (471)
Q Consensus 169 g~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~l~~L~~~g~I~~~~Fsl~L~~~~~~~~~G~L~fGg 248 (471)
|+.++++|.||++....+..+....++||||||++..+....++++++|+++|.|++++||+||++..+....|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 56789999999999877655666788999999999887777788999999999999999999999875333489999999
Q ss_pred cCCCCCccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHHHHHHHHHhCCcceeecccchh
Q 012110 249 VDPNHYKGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMINHAIGASGVVSQQCKAV 328 (471)
Q Consensus 249 iD~s~~~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i~~~i~a~~~~~~~C~~~ 328 (471)
+|+++|.|+++|+|+.+.++|.|.+++|+|+++.+. +..+..+++||||+++++|++++++|++++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 4567899999999999999999999999998761
Q ss_pred hcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHHHHHHHHhhhcccH
Q 012110 329 VEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAVVWMQNQLQQNQTQ 408 (471)
Q Consensus 329 ~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (471)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhccCCCCCCCCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 409 ENILQYVNELCDRMPSPMGESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
...|.|.++|++..++|.|+|+|+|++|+|+|++|+++..+ +..|+.
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~ 199 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLS 199 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEE
Confidence 12467999999888999999999999999999999999764 457874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=3.2e-23 Score=170.12 Aligned_cols=93 Identities=63% Similarity=1.089 Sum_probs=86.5
Q ss_pred ceeeeeecCCcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCC-CcccCCCCCCCCCCCCcceeCCeeEEEEeccCe
Q 012110 78 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHSKYKSSQSSTYKKNGESASIQYGTGA 156 (471)
Q Consensus 78 ~~~~l~n~~~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs 156 (471)
..+||.|+.+..|+++|.||||+|+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 3589999999999999999999999999999999999999999952 247988999999999999999999999999999
Q ss_pred EEeEEEEEEEEEee
Q 012110 157 IAGFFSYDSVKVGD 170 (471)
Q Consensus 157 ~~G~~~~D~v~ig~ 170 (471)
++|.+++|+|.|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999975
No 37
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.59 E-value=1.7e-16 Score=132.30 Aligned_cols=107 Identities=50% Similarity=0.937 Sum_probs=77.8
Q ss_pred CCcceeecccchhhcccchhhhhhhhhccCcccccccCCcccCCCcccccccccccccccCccccCcCCccccchhHHHH
Q 012110 316 GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDGKRGVSMGIESVVDESNDKSSGVLNNAMCSACEMAV 395 (471)
Q Consensus 316 ~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (471)
||.|.+.-.|+..+..||...|++..++++|..+|+..|+|..+++...++.++.++++.+..++ +.++.+|.+|+|++
T Consensus 2 ~a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~~~~~-~~~~~~C~~Ce~~V 80 (108)
T 3rfi_A 2 SAMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERETEGSS-VGEAPLCTACEMAV 80 (108)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccccccc-CCCCCcChhHHHHH
Confidence 56677888999999999999999999999999999999999999887777777777766544332 24889999999999
Q ss_pred HHHHHHhhhcccHHHHHHHHHhhccCCC
Q 012110 396 VWMQNQLQQNQTQENILQYVNELCDRMP 423 (471)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (471)
+|+|++|.+|.|+++|+.+|+++|+++|
T Consensus 81 ~~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 81 VWMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999987
No 38
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.19 E-value=5.5e-07 Score=71.50 Aligned_cols=44 Identities=50% Similarity=0.672 Sum_probs=39.1
Q ss_pred CCeeEecccCCCCCcEEEEECCEEEEeCCCcceEEccC--CCcccC
Q 012110 427 GESAVDCGKLSSMPIVSFTIGGKVFDLSPEEDLGRRLH--GSLPYS 470 (471)
Q Consensus 427 ~~~~~~c~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 470 (471)
|.|.|+|++++++|+|+|+|+|++|+|+|++|+++... ...|++
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~ 46 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCIS 46 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEE
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEE
Confidence 67999999999999999999999999999999999764 357874
No 39
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=97.71 E-value=8.8e-06 Score=65.07 Aligned_cols=49 Identities=22% Similarity=0.672 Sum_probs=43.3
Q ss_pred CccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEeccc
Q 012110 384 NNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGK 435 (471)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 435 (471)
++..|.+|+|++.++++++.+|.++++|+++|+++|+++|+... ..|..
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~~~---~~C~~ 52 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLS---EECQE 52 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSSTT---TTHHH
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCCcc---cchHH
Confidence 56789999999999999999999999999999999999997543 36754
No 40
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=97.61 E-value=3.3e-05 Score=59.90 Aligned_cols=48 Identities=25% Similarity=0.651 Sum_probs=42.4
Q ss_pred ccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEeccc
Q 012110 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGK 435 (471)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 435 (471)
+..|.+|+|++.++++.+.+|.++++|++.|+++|+++|++ +...|..
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~~---~~~~C~~ 49 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPDP---YQKQCDQ 49 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCGG---GHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCCc---cchhhHH
Confidence 56899999999999999999999999999999999999963 3446754
No 41
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=97.51 E-value=5.8e-05 Score=59.09 Aligned_cols=41 Identities=34% Similarity=0.699 Sum_probs=38.7
Q ss_pred ccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCC
Q 012110 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSP 425 (471)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (471)
+..|.+|++++.++++++.++.++++|+++|+++|.++|++
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999975
No 42
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=97.39 E-value=9.5e-05 Score=56.54 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=36.5
Q ss_pred cccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCC
Q 012110 386 AMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSP 425 (471)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (471)
..|.+|++++..+++.+ ++.|+++|+..|+++|+++|.+
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~ 40 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSR 40 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChH
Confidence 46999999999999999 9999999999999999999853
No 43
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=97.25 E-value=0.00015 Score=55.86 Aligned_cols=41 Identities=17% Similarity=0.529 Sum_probs=37.8
Q ss_pred ccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCC
Q 012110 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPM 426 (471)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (471)
...|..|++++.++++.+.++ |+++|+++|+++|+.+|.+.
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~~ 42 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGFI 42 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSSTT
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChHH
Confidence 467999999999999999999 99999999999999998553
No 44
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=97.24 E-value=0.00021 Score=55.78 Aligned_cols=41 Identities=24% Similarity=0.673 Sum_probs=38.5
Q ss_pred CccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCC
Q 012110 384 NNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPS 424 (471)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (471)
++..|.+|++++.++++.+.+|.+++.|++.|+++|.++|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 56789999999999999999999999999999999999985
No 45
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=97.19 E-value=0.00017 Score=55.83 Aligned_cols=39 Identities=13% Similarity=0.499 Sum_probs=37.2
Q ss_pred cccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCC
Q 012110 386 AMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPS 424 (471)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (471)
..|.+|++++.++++.+.++.|+++|++.|+++|+++|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 469999999999999999999999999999999999986
No 46
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=97.10 E-value=0.00032 Score=54.62 Aligned_cols=42 Identities=26% Similarity=0.514 Sum_probs=38.7
Q ss_pred CccccchhHHHHHHHHHHhhhcccH-HHHHHHHHhhccCCCCC
Q 012110 384 NNAMCSACEMAVVWMQNQLQQNQTQ-ENILQYVNELCDRMPSP 425 (471)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 425 (471)
++..|..|++++..+++.+.+|.|+ ++|+++|+++|+++|..
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~~ 44 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGPG 44 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCTT
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCcH
Confidence 4678999999999999999999999 99999999999999953
No 47
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=96.76 E-value=0.0002 Score=57.89 Aligned_cols=52 Identities=13% Similarity=0.326 Sum_probs=44.9
Q ss_pred CCccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCCCCCCeeEecccC
Q 012110 383 LNNAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPSPMGESAVDCGKL 436 (471)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 436 (471)
.++..|.+|++++.++++.+ |.++++|++.|+++|+++|.....+.-.|.++
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~~ 70 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDHY 70 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHTT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 57889999999999999999 77899999999999999996655566678764
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=93.88 E-value=0.058 Score=46.41 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=51.5
Q ss_pred CcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccCe--EEeEEEEE
Q 012110 87 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTGA--IAGFFSYD 164 (471)
Q Consensus 87 ~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~gs--~~G~~~~D 164 (471)
...+++++.|+ ++++++++|||++.+.+...... .+.-....+. .+. ....+.|. ..|.+..+
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~------~~a~g~g~~~~~~~~~~~ 88 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI------GEARGVGTGKIIGRIHQA 88 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC-----------------CEEEEEE
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE------EEEecCCCcccccEEEEE
Confidence 56799999998 68999999999999888532110 1111001111 110 01122222 24666678
Q ss_pred EEEEeeEeeccceEEEEEecCCccccccccceEEcCC
Q 012110 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLG 201 (471)
Q Consensus 165 ~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg 201 (471)
.+.+|+...+ ..|.+.. .+.+||||+.
T Consensus 89 ~i~ig~~~~~-~~~~vl~---------~~~d~iLG~d 115 (148)
T 2i1a_A 89 QVKIETQYIP-CSFTVLD---------TDIDVLIGLD 115 (148)
T ss_dssp EEEETTEEEE-EEEEEEC---------SSCSEEECHH
T ss_pred EEEECCEEec-eeEEEec---------CCCCeEecHH
Confidence 8999987754 5554432 1358999985
No 49
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=89.34 E-value=0.099 Score=41.08 Aligned_cols=40 Identities=40% Similarity=0.830 Sum_probs=34.7
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCcccCCC
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTFDG 360 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~~~ 360 (471)
+...|+..+..|++..|++..+..+|+.+|...|.|..+.
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~~ 85 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGTR 85 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC----
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCcc
Confidence 6789999999999999999999999999999999998764
No 50
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.31 E-value=0.4 Score=41.30 Aligned_cols=91 Identities=14% Similarity=0.230 Sum_probs=52.8
Q ss_pred CcEEEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCCCCcccCCCCCCCCCCCCcceeCCeeEEEEeccC--eEEeEEEEE
Q 012110 87 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHSKYKSSQSSTYKKNGESASIQYGTG--AIAGFFSYD 164 (471)
Q Consensus 87 ~~~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~Sst~~~~~~~~~~~Y~~g--s~~G~~~~D 164 (471)
...|++++.|+ ++++++++|||++.+.+...-.. .|.-...-+. .+.. ...+-| ...|.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~~------~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWAG------VAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGCE------ECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----ceeE------EEEcCCccEEEEEEEEE
Confidence 34689999998 69999999999999998543211 1211000000 0000 011112 246777778
Q ss_pred EEEEeeEeeccceEEEEEecCCccccccccceEEcCC
Q 012110 165 SVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLG 201 (471)
Q Consensus 165 ~v~ig~~~i~~~~fg~a~~~~~~~~~~~~~dGIlGLg 201 (471)
.+.+|+..++ ..|.+.. ....++|||+-
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD 114 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLD 114 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHH
Confidence 8999987653 4444332 12348999985
No 51
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=87.40 E-value=0.14 Score=38.94 Aligned_cols=37 Identities=24% Similarity=0.683 Sum_probs=35.1
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCccc
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~ 357 (471)
+...|+..+..|++..|++..++++|+.+|+..|.|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 6778999999999999999999999999999999996
No 52
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=83.60 E-value=0.26 Score=39.45 Aligned_cols=37 Identities=22% Similarity=0.468 Sum_probs=34.9
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCccc
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~ 357 (471)
+.-.|+..+..|++..|++..++.+|+.+|...|.|.
T Consensus 63 ~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 63 GTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp HHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 5678999999999999999999999999999999994
No 53
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=82.61 E-value=0.2 Score=38.20 Aligned_cols=37 Identities=22% Similarity=0.516 Sum_probs=35.1
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCccc
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~ 357 (471)
+.-.|+..+..|++..|+...++.+|+.+|...|.|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 6678999999999999999999999999999999996
No 54
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=82.26 E-value=0.21 Score=38.35 Aligned_cols=38 Identities=42% Similarity=0.882 Sum_probs=34.8
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCcccC
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCTF 358 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~~ 358 (471)
+.-.|+..+..|++..|++..++++|+.+|...|.|.-
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~ 82 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC-
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCCC
Confidence 56789999999999999999999999999999999963
No 55
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=80.76 E-value=0.22 Score=37.82 Aligned_cols=38 Identities=18% Similarity=0.494 Sum_probs=34.9
Q ss_pred ceeecccchhhcccchhhhhhhhhccCcccccccCCcc
Q 012110 319 GVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLC 356 (471)
Q Consensus 319 ~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C 356 (471)
+.+.-.|+..+..|++..|+...++.+|+.+|...|.|
T Consensus 40 ~~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 40 GFIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp STTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 34667899999999999999999999999999999988
No 56
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.68 E-value=3.1 Score=33.13 Aligned_cols=30 Identities=23% Similarity=0.264 Sum_probs=25.4
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCCCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (471)
=++.|.|| +|.+.+++|||.+++-+.....
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 45779999 6999999999999999976544
No 57
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=76.98 E-value=0.32 Score=37.28 Aligned_cols=37 Identities=38% Similarity=0.797 Sum_probs=34.1
Q ss_pred eecccchhhcccchhhhhhhhhcc-CcccccccCCccc
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEA-HPKKICSQMGLCT 357 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~-~~~~~c~~~g~C~ 357 (471)
+.-.|+..+..|++..|+...+++ +|+.+|+..|.|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 467899999999999999999995 9999999999996
No 58
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=76.38 E-value=2.6 Score=33.91 Aligned_cols=27 Identities=19% Similarity=0.228 Sum_probs=23.8
Q ss_pred EEEEEEEEcCCCcEEEEEEecCCCcEEEe
Q 012110 89 QYYGEIGIGTPPQKFTVIFDTGSSNLWVP 117 (471)
Q Consensus 89 ~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~ 117 (471)
.-++.|.|| +|.+.+++|||..++-+.
T Consensus 8 RP~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 8 RPTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CCEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 346789999 699999999999999997
No 59
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=75.70 E-value=0.43 Score=36.50 Aligned_cols=36 Identities=28% Similarity=0.844 Sum_probs=31.8
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccCCccc
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLCT 357 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C~ 357 (471)
+.-.|+..+..||+..|++.. +.+|+.+|+..|.|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 667899999999997777666 799999999999996
No 60
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=72.08 E-value=4.7 Score=32.05 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=25.3
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCCCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (471)
-++.|.|| +|.+.+++|||.+++-+...+.
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 46779999 7999999999999999965544
No 61
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=66.68 E-value=1.1 Score=34.84 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=32.7
Q ss_pred ccccchhHHHHHHHHHHhhhcccHHHHHHHHHhhccCCCC
Q 012110 385 NAMCSACEMAVVWMQNQLQQNQTQENILQYVNELCDRMPS 424 (471)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (471)
+-.|.+|++++..++..++++.+ .++..+...|++...
T Consensus 10 ~l~C~~C~~~Vk~~e~~i~~~~~--eie~~~d~~Ckk~~~ 47 (87)
T 3s64_A 10 VIVCEICKMAVKLIVPEADKDLD--QLEKEFIQGCMTLIG 47 (87)
T ss_dssp TTHHHHHHHHHHHHTTCSSCSST--THHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHhcc
Confidence 34699999999999999998666 599999999988743
No 62
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=66.38 E-value=2.7 Score=27.81 Aligned_cols=23 Identities=22% Similarity=0.146 Sum_probs=19.2
Q ss_pred ceEEEeeeecCCCchhhhhhcch
Q 012110 29 GLVRIGLKKMKLDPNNRLAARLE 51 (471)
Q Consensus 29 ~~~~ipl~r~~~~~~~~~~~~~~ 51 (471)
.++||||+|.++.++.+.+.+..
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~ 29 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVD 29 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCC
T ss_pred ceeEEeeeecccHHHHHHHcCch
Confidence 57899999999999988877643
No 63
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=65.79 E-value=5.6 Score=32.37 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=27.0
Q ss_pred EEEEEEEc---CCCcEEEEEEecCCCcEEEeCCCCC
Q 012110 90 YYGEIGIG---TPPQKFTVIFDTGSSNLWVPSTNCY 122 (471)
Q Consensus 90 Y~~~I~IG---tP~Q~~~v~lDTGSs~~WV~~~~C~ 122 (471)
=.+.|.|| +|+|.+..++|||-+++-+....++
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 35566666 7899999999999999999876664
No 64
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=60.72 E-value=7.8 Score=31.70 Aligned_cols=27 Identities=15% Similarity=0.074 Sum_probs=23.1
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPST 119 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~ 119 (471)
=++ |.|| +|.+.+++|||.+++-+...
T Consensus 15 P~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 445 9999 69999999999999999653
No 65
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=53.81 E-value=13 Score=30.17 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=26.0
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCCCCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY 122 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C~ 122 (471)
-.+.|.|| +|.+..++|||-+++-+...+.+
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGSC
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccCC
Confidence 45778999 69999999999999999765553
No 66
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=52.20 E-value=7.1 Score=25.15 Aligned_cols=22 Identities=27% Similarity=0.232 Sum_probs=17.8
Q ss_pred eEEEeeeecCCCchhhhhhcch
Q 012110 30 LVRIGLKKMKLDPNNRLAARLE 51 (471)
Q Consensus 30 ~~~ipl~r~~~~~~~~~~~~~~ 51 (471)
+++|||+|.++.++.+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999888887776544
No 67
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=52.05 E-value=17 Score=30.42 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=25.3
Q ss_pred EEEEEEEEcCCCcEEEEEEecCCCcEEEeCCC
Q 012110 89 QYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN 120 (471)
Q Consensus 89 ~Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~ 120 (471)
.-++.+.|+ +|.+.+++|||.+++.+....
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 467789999 699999999999999996543
No 68
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=50.91 E-value=6.4 Score=23.99 Aligned_cols=23 Identities=17% Similarity=0.057 Sum_probs=17.6
Q ss_pred ceEEEeeeecCCCchhhhhhcch
Q 012110 29 GLVRIGLKKMKLDPNNRLAARLE 51 (471)
Q Consensus 29 ~~~~ipl~r~~~~~~~~~~~~~~ 51 (471)
++++|||+|.++.++.+.+.+..
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g~~ 24 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARSQL 24 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcccH
Confidence 37899999998888777665533
No 69
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=50.81 E-value=2.8 Score=31.43 Aligned_cols=33 Identities=15% Similarity=0.490 Sum_probs=30.1
Q ss_pred eecccchhhcccchhhhhhhhhccCcccccccC
Q 012110 321 VSQQCKAVVEQYGQTILDLLLFEAHPKKICSQM 353 (471)
Q Consensus 321 ~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~ 353 (471)
|.-.|+..+..|++..|+..+++.+|..+|...
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 667899999999999999999999999999764
No 70
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A
Probab=48.45 E-value=11 Score=28.24 Aligned_cols=30 Identities=20% Similarity=0.577 Sum_probs=26.6
Q ss_pred cccHHHHHHHHHhhccCCCCCCCCeeEecc
Q 012110 405 NQTQENILQYVNELCDRMPSPMGESAVDCG 434 (471)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 434 (471)
.+++|.|++||+++...+.+..+...+.|+
T Consensus 5 ~p~~~~i~~~l~ki~~~vtS~WS~CSvTCG 34 (77)
T 3vdj_A 5 EPSDKHIKEYLNKIQNSLSTEWSPCSVTCG 34 (77)
T ss_dssp SCCHHHHHHHHHHHTTTCSSSCCCCSCSSS
T ss_pred cccHHHHHHHHHHHhccccccCCCCCCcCC
Confidence 579999999999999999998888777775
No 71
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=47.50 E-value=15 Score=30.80 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=23.1
Q ss_pred EEECCeecccccCCceEEEcCCcccccccHHHHHHH
Q 012110 276 VLIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (471)
Q Consensus 276 i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i 311 (471)
+.|+|..+ .+++|||++.+.++.+..+.+
T Consensus 31 v~InG~~~-------~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPV-------KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEE-------EEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEE-------EEEEECCCCccccCHHHHHHc
Confidence 55677643 579999999999998887664
No 72
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=46.71 E-value=14 Score=31.42 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=22.5
Q ss_pred EECCeecccccCCceEEEcCCcccccccHHHHHHH
Q 012110 277 LIGGKPTGYCAGGCSAIADSGTSLLAGPTTVITMI 311 (471)
Q Consensus 277 ~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~~~~i 311 (471)
.|+|..+ .+++|||++.+.++.+.++.+
T Consensus 30 ~Ing~~v-------~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 30 KVNGHPL-------KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EETTEEE-------EEEECTTCSSCEEEHHHHHHT
T ss_pred EECCEEE-------EEEEeCCCCcEeeCHHHHHHc
Confidence 4676654 579999999999999887765
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=41.71 E-value=22 Score=32.00 Aligned_cols=29 Identities=28% Similarity=0.307 Sum_probs=24.8
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTN 120 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~ 120 (471)
-.+.|.|| +|.+.+++|||.+++-+...+
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEeccc
Confidence 56789999 699999999999999996433
No 74
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=38.57 E-value=29 Score=28.58 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=20.9
Q ss_pred EcCCCcEEEEEEecCCCcEEEeCCCCC
Q 012110 96 IGTPPQKFTVIFDTGSSNLWVPSTNCY 122 (471)
Q Consensus 96 IGtP~Q~~~v~lDTGSs~~WV~~~~C~ 122 (471)
|| +|.+..++|||-+++.+.....+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTSC
T ss_pred CC--CEEEEEEecCCCCcEEEecccCC
Confidence 66 58899999999999999876553
No 75
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=28.01 E-value=27 Score=20.90 Aligned_cols=17 Identities=18% Similarity=0.487 Sum_probs=15.6
Q ss_pred cchhHHHHHHHHHHhhh
Q 012110 388 CSACEMAVVWMQNQLQQ 404 (471)
Q Consensus 388 ~~~~~~~~~~~~~~~~~ 404 (471)
|-+|.-++.-||.++++
T Consensus 1 cwlcr~likriqa~ipk 17 (34)
T 1ssz_A 1 CWLCRALIKRIQAMIPK 17 (34)
T ss_dssp CHHHHHHHHHHHHHCSS
T ss_pred ChhHHHHHHHHHHHccc
Confidence 78999999999999987
No 76
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=26.09 E-value=63 Score=29.26 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=26.4
Q ss_pred eeeeeecCCcEEEEE---EEEcCC-----CcEEEEEEecCCCcEEEeC
Q 012110 79 IVALKNYMDAQYYGE---IGIGTP-----PQKFTVIFDTGSSNLWVPS 118 (471)
Q Consensus 79 ~~~l~n~~~~~Y~~~---I~IGtP-----~Q~~~v~lDTGSs~~WV~~ 118 (471)
.+|+.+. ..|.++ |.||.. .....++||||++.+++|.
T Consensus 181 ~~p~~~~--~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 181 YVPVTYQ--YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp EEEEEEE--TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred EEEcccC--CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 4566543 345554 788852 3457899999999999975
No 77
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=24.32 E-value=12 Score=28.96 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=37.9
Q ss_pred HHHHHHHHHh-CCcceeecccchhhcccchhhhhhhhhccCcccccccCCcc
Q 012110 306 TVITMINHAI-GASGVVSQQCKAVVEQYGQTILDLLLFEAHPKKICSQMGLC 356 (471)
Q Consensus 306 ~~~~~i~~~i-~a~~~~~~~C~~~~~~fg~~~i~~~~~~~~~~~~c~~~g~C 356 (471)
..+++.=+.+ ++...-+-.|+..+.++.+..|+...++.+|+.+|+..+.|
T Consensus 36 ~~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 36 KEFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 3444444444 33322234799999999999999999999999999988777
No 78
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.32 E-value=76 Score=31.22 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=27.9
Q ss_pred cceeeeeecCCcEEEEE---EEEcCCCcEE----------------EEEEecCCCcEEEeCC
Q 012110 77 TDIVALKNYMDAQYYGE---IGIGTPPQKF----------------TVIFDTGSSNLWVPST 119 (471)
Q Consensus 77 ~~~~~l~n~~~~~Y~~~---I~IGtP~Q~~----------------~v~lDTGSs~~WV~~~ 119 (471)
...+|+.......|.++ |.||. +.+ .++||||++.+.+|..
T Consensus 217 l~~~Pl~~~~~~~y~v~l~~i~v~g--~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 217 LAFTPLTITLQGEYNVRVNSIRINQ--HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp EEEEECEECTTSCEEECEEEEEETT--EEEECC------------CCEEECSSCSSEEECHH
T ss_pred eeecccccCCCCcceEEEEEEEECC--EEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 34567776433567664 67885 333 1899999999999753
No 79
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=20.96 E-value=64 Score=30.63 Aligned_cols=43 Identities=26% Similarity=0.223 Sum_probs=30.5
Q ss_pred ccceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHH
Q 012110 255 KGKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (471)
Q Consensus 255 ~G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~ 307 (471)
.|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGT-------TLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTE-------EEEEEEETTCCCEEECBTT
T ss_pred CCceeeeecCCCCEEEEE---EEECCE-------EEEEEEeCCCcceEEecCC
Confidence 355666677666677654 567732 3578999999999998753
No 80
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=20.54 E-value=1.1e+02 Score=27.44 Aligned_cols=30 Identities=27% Similarity=0.280 Sum_probs=25.0
Q ss_pred EEEEEEEcCCCcEEEEEEecCCCcEEEeCCCC
Q 012110 90 YYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC 121 (471)
Q Consensus 90 Y~~~I~IGtP~Q~~~v~lDTGSs~~WV~~~~C 121 (471)
-.+.+.|| +|.+..++|||.+++-+...+.
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecccC
Confidence 46789999 6999999999999999965443
No 81
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=20.31 E-value=64 Score=30.67 Aligned_cols=42 Identities=17% Similarity=0.103 Sum_probs=29.6
Q ss_pred cceeEEecccccceEEEEeeEEECCeecccccCCceEEEcCCcccccccHHH
Q 012110 256 GKHTYVPVTQKGYWQFNMGDVLIGGKPTGYCAGGCSAIADSGTSLLAGPTTV 307 (471)
Q Consensus 256 G~l~~~pv~~~~~W~v~l~~i~vgg~~i~~~~~~~~aiiDTGtt~i~lP~~~ 307 (471)
|.+...|+.....|.++ |.||.+ ...+++|||++.+++|...
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q-------~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKS-------TLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTE-------EEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCE-------EEEEEEeCCCccceEeeCC
Confidence 45556666666677655 567732 4578999999999998753
Done!