BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012111
(471 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SCP4|PP279_ARATH Pentatricopeptide repeat-containing protein At3g53170
OS=Arabidopsis thaliana GN=At3g53170 PE=2 SV=1
Length = 447
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 278/420 (66%), Positives = 345/420 (82%)
Query: 44 QKEAEKDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGL 103
Q + +K+LS+ILRT+ A+K IE+K +S+KY LWPK VLEALDEAIK+ +WQ ALKIF L
Sbjct: 24 QVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNL 83
Query: 104 LRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSG 163
LR+Q WY+ RC+T+TKL +LG CKQP+QASLLFEVMLS+GLKP++DVYT+L+S YG+S
Sbjct: 84 LRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSE 143
Query: 164 LLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTY 223
LLD+AFST+ MKSVSDCKPDV+T+++LI C K RFDL++ I+ EMSYLG+ CS VTY
Sbjct: 144 LLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTY 203
Query: 224 NTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFN 283
NTIIDGYGKA FEEMES + M+E G PD+ TLNS+I +YGN N+ KME WY+ F
Sbjct: 204 NTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQ 263
Query: 284 LMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIE 343
LMGV+ DI T NIL S+G+AGMY KM SVMDFM+KRFF T VTYNIVIETFGKAG IE
Sbjct: 264 LMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIE 323
Query: 344 KMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCII 403
KM++ F+KMK++G+KPNSITYCSLV+AYSKAGL++K+DS+LRQ+ NSDV+LDTPFFNCII
Sbjct: 324 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 383
Query: 404 SAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKEN 463
+AYGQAGD+ M EL++ M+ER C PD ITFATMI+ Y A G+ +A Q LE +MI+ EN
Sbjct: 384 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSGEN 443
>sp|Q9FKC3|PP424_ARATH Pentatricopeptide repeat-containing protein At5g48730,
chloroplastic OS=Arabidopsis thaliana GN=At5g48730 PE=2
SV=2
Length = 508
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/407 (45%), Positives = 268/407 (65%), Gaps = 3/407 (0%)
Query: 47 AEKDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGLLRQ 106
+ K +S ILR E IEKK SKK L P+ VLE+L E I +W+ A+++F LLR+
Sbjct: 86 SRKAISIILRREATKSIIEKKKGSKK---LLPRTVLESLHERITALRWESAIQVFELLRE 142
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
Q WY+ + KL+VMLGKCKQPE+A LF+ M+++G + +VYTALVSAY +SG D
Sbjct: 143 QLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFD 202
Query: 167 EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTI 226
AF+ + MKS +C+PDV+TYSILIKS + FD ++ +L++M GI + +TYNT+
Sbjct: 203 AAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTL 262
Query: 227 IDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
ID YGKAK F EMES+ M+ C PD +T+NS + A+G +G IE ME Y +F G
Sbjct: 263 IDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 322
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
++ +I+T NIL SYG++G Y KM +VM++MQK + T+VTYN+VI+ FG+AG +++ME
Sbjct: 323 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 382
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
F+ M+ + P+ +T CSLV AY +A K+ +LR +ENSD+ LD FFNC++ AY
Sbjct: 383 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 442
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G+ +M + M+++ PD IT+ TM++AY GMT + L
Sbjct: 443 GRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 489
>sp|Q9SQU6|PP216_ARATH Pentatricopeptide repeat-containing protein At3g06430,
chloroplastic OS=Arabidopsis thaliana GN=EMB2750 PE=2
SV=1
Length = 486
Score = 352 bits (902), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 176/444 (39%), Positives = 275/444 (61%), Gaps = 9/444 (2%)
Query: 28 IQAIKRSPGPIQELGIQKEAE--KDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEAL 85
+ A K SPG + + + K+ E + + IKN++KK+ + N W V E L
Sbjct: 36 LAASKSSPGSVTKKRLWKDGEFPGITEPVNQRRTPIKNVKKKLDRRSKANGWVNTVTETL 95
Query: 86 DEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGL 145
+ I +K+W AL++F +LR+Q +YQ + T+ KL+V+LGK QP +A LF+ ML +GL
Sbjct: 96 SDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGL 155
Query: 146 KPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIE 205
+P+V++YTAL++AY +S L+D+AFS ++ MKS C+PDV+TYS L+K+C +FDL++
Sbjct: 156 EPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVD 215
Query: 206 KILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISA 265
+ EM I + VT N ++ GYG+ +F++ME S M+ S C PD++T+N ++S
Sbjct: 216 SLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSV 275
Query: 266 YGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPT 325
+GN G I+ ME WY +F G++ + +T NIL SYG+ MYDKM SVM++M+K F T
Sbjct: 276 FGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWT 335
Query: 326 VVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILR 385
TYN +IE F G + ME F +M+ GMK ++ T+C L++ Y+ AGL KV S ++
Sbjct: 336 TSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQ 395
Query: 386 QVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALG 445
++ +T F+N +ISA +A D+ +M +++ MKER CV D+ TF M++AY G
Sbjct: 396 LAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEG 455
Query: 446 MTE-------AAQNLENKMIAMKE 462
M + Q L ++ +A KE
Sbjct: 456 MNDKIYYLEQERQKLMDRTVATKE 479
>sp|Q9SV96|PP358_ARATH Pentatricopeptide repeat-containing protein At4g39620,
chloroplastic OS=Arabidopsis thaliana GN=EMB2453 PE=2
SV=1
Length = 563
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 176/363 (48%), Gaps = 5/363 (1%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+E K KW L++F +++Q+WY ++KL+ ++GK Q A LF M + G
Sbjct: 104 FEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSG 163
Query: 145 LKPSVDVYTALVSAY----GQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHR 200
+P VY AL++A+ ++ L++ ++ MK + C+P+V TY+IL+++ + +
Sbjct: 164 CRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGK 223
Query: 201 FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLN 260
D + + ++ + T+N ++D YGK +EME+ + M S C PDI T N
Sbjct: 224 VDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFN 282
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
+I +YG EKME+ + K + T N + +YG+A M DK V M
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 321 FFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKV 380
+ P+ +TY +I +G G + + E F+++ + T +++ Y + GL ++
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
D + V D + + AY +A E++ L M++ VP+ F ++
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
Query: 441 YNA 443
+ +
Sbjct: 463 FGS 465
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 200/401 (49%), Gaps = 38/401 (9%)
Query: 94 WQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYT 153
WQ +L++F +++Q W + +T ++ +LG+ ++ +F+ M S G+ SV YT
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 154 ALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFH-RFDLIEKILAEMS 212
AL++AYG++G + + ++ MK+ P + TY+ +I +C + ++ + + AEM
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 213 YLGIECSAVTYNTII--------------------DG---------------YGKAKKFE 237
+ GI+ VTYNT++ DG +GK ++ E
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 238 EMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNIL 297
++ M SGG PDI + N ++ AY SG+I++ +++ G + T ++L
Sbjct: 300 KVCDLLGEMA-SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 298 TKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGM 357
+G++G YD +R + M+ P TYNI+IE FG+ G+ +++ F M +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 358 KPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGE 417
+P+ TY ++ A K GL IL+ + +D++ + + +I A+GQA E+
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 418 LFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
F TM E P TF +++ ++ G+ + ++ + ++++
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Score = 139 bits (349), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 159/345 (46%), Gaps = 43/345 (12%)
Query: 136 LFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEA---FSTINDMKSVSDCKPDVYTYSILI 192
LF M +G++P + Y L+SA GL DEA F T+ND V PD+ TYS L+
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIV----PDLTTYSHLV 289
Query: 193 KSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGC 252
++ K R + + +L EM+ G +YN +++ Y K+ +E F M ++ GC
Sbjct: 290 ETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGC 348
Query: 253 HPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG---------- 302
P+ T + +++ +G SG + + + + E D T NIL + +G
Sbjct: 349 TPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Query: 303 -------------------------RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFG 337
+ G+++ R ++ +M P+ Y VIE FG
Sbjct: 409 LFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 338 KAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTP 397
+A E+ F M G P+ T+ SL+ ++++ GL+ + ++IL ++ +S + +
Sbjct: 469 QAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRD 528
Query: 398 FFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYN 442
FN I AY Q G E+ + ++ M++ C PD T ++ Y+
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 162/315 (51%), Gaps = 3/315 (0%)
Query: 146 KPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIE 205
KP+ +YT ++S G+ GLLD+ ++M S + V++Y+ LI + + R++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSR-SVFSYTALINAYGRNGRYETSL 196
Query: 206 KILAEMSYLGIECSAVTYNTIIDGYGKAK-KFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
++L M I S +TYNT+I+ + +E + F+ M G PDI T N+++S
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLS 255
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
A G ++ E + N G+ D+ T + L +++G+ +K+ ++ M P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
+ +YN+++E + K+G I++ F +M+ G PN+ TY L++ + ++G V +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNAL 444
++++S+ D +N +I +G+ G +++ LF M E + PD T+ +I A
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 445 GMTEAAQNLENKMIA 459
G+ E A+ + M A
Sbjct: 436 GLHEDARKILQYMTA 450
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 158/348 (45%), Gaps = 5/348 (1%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T++ L+ GK ++ E+ L M S G P + Y L+ AY +SG + EA + M
Sbjct: 284 TYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
++ C P+ TYS+L+ + R+D + ++ EM + A TYN +I+ +G+
Sbjct: 344 QAAG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
F+E+ + F MVE PD+ T +I A G G E K + +
Sbjct: 403 FKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ +++G+A +Y++ + M + P++ T++ ++ +F + G +++ E ++
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+ N T+ + + AY + G + +E S D ++S Y A V++
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDEC 581
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKEN 463
E F MK +P + + M+ Y G TE ++ + M N
Sbjct: 582 REQFEEMKASDILPSIMCYCMMLAVY---GKTERWDDVNELLEEMLSN 626
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 138/295 (46%), Gaps = 8/295 (2%)
Query: 102 GLLRQQQWYQARC----QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVS 157
G+ Q Q A C T++ L+ + G+ + + LF M S P Y L+
Sbjct: 338 GVFHQMQ--AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIE 395
Query: 158 AYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIE 217
+G+ G E + +DM + +PD+ TY +I +C K + KIL M+ I
Sbjct: 396 VFGEGGYFKEVVTLFHDMVE-ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 218 CSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEK 277
S+ Y +I+ +G+A +EE +F+ M E G +P I T +S++ ++ G +++ E
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG-SNPSIETFHSLLYSFARGGLVKESEA 513
Query: 278 WYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFG 337
+ G+ + T N ++Y + G +++ M+K P T V+ +
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Query: 338 KAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDV 392
A +++ E F++MK + P+ + YC +++ Y K V+ +L ++ ++ V
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRV 628
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 8/222 (3%)
Query: 232 KAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADI 291
KAK + + + S VE G D+ +L + +S+ G+I + ++ K +
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARC------LDIFKNKLSL 105
Query: 292 QTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF-PTVVTYNIVIETFGKAGHIEKMEEYFK 350
++ K + G + + + +MQ++ + P Y I+I G+ G ++K E F
Sbjct: 106 NDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFD 165
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+M +G+ + +Y +L++AY + G +L +++N + +N +I+A + G
Sbjct: 166 EMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGG 225
Query: 411 -DVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQ 451
D E + LF M+ PD +T+ T++ A G+ + A+
Sbjct: 226 LDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAE 267
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/172 (18%), Positives = 68/172 (39%), Gaps = 6/172 (3%)
Query: 137 FEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCT 196
FE M + + PS+ Y +++ YG++ D+ + +M S ++
Sbjct: 585 FEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYD 644
Query: 197 KFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDI 256
+ ++E +L +++ G YN ++D + E + + G P++
Sbjct: 645 DDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRG-LFPEL 703
Query: 257 FTLNSMISAY-----GNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGR 303
F N ++ + G + W N+ N M +K D+ L ++ G+
Sbjct: 704 FRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKGDLPQLAVVVSVRGQ 755
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 179/371 (48%), Gaps = 5/371 (1%)
Query: 91 QKKWQLALKIFGLLRQQQWYQARCQTFTKLMV--MLGKCKQPEQASLLFEVMLSDGLKPS 148
KK+ LAL+ F +Q+ YQ+ ++ MLGK + A+ +F + DG
Sbjct: 148 HKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLD 207
Query: 149 VDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHR-FDLIEKI 207
V YT+L+SA+ SG EA + M+ CKP + TY++++ K ++ I +
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEE-DGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 208 LAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYG 267
+ +M GI A TYNT+I + +E F M +G + D T N+++ YG
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYG 325
Query: 268 NSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVV 327
S ++ K NE L G I T N L +Y R GM D+ + + M ++ P V
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 328 TYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQV 387
TY ++ F +AG +E F++M++ G KPN T+ + + Y G ++ I ++
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 388 ENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMT 447
+ D +N +++ +GQ G ++ +F MK VP+ TF T+I AY+ G
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 448 EAAQNLENKMI 458
E A + +M+
Sbjct: 506 EQAMTVYRRML 516
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 160/342 (46%), Gaps = 2/342 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ L+ + GK +P++A + M+ +G PS+ Y +L+SAY + G+LDEA N M
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 375
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
KPDV+TY+ L+ + + + I EM G + + T+N I YG K
Sbjct: 376 AE-KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
F EM F + G PDI T N++++ +G +G ++ + E G + +T N
Sbjct: 435 FTEMMKIFDE-INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L +Y R G +++ +V M P + TYN V+ + G E+ E+ +M+
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
KPN +TYCSL+ AY+ I + S+ +V + + ++ + + +
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
F +KER PD T +M+ Y M A + + M
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYM 655
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 161/336 (47%), Gaps = 2/336 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ L+ + G+ + S +F+ M G P + + L+SAY + G ++A + M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
PD+ TY+ ++ + + ++ EK+LAEM + + +TY +++ Y K+
Sbjct: 516 LDAG-VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
M S + V SG P L +++ + + E+ ++E G DI TLN
Sbjct: 575 IGLMHS-LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLN 633
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ YGR M K V+D+M++R F P++ TYN ++ ++ K EE +++ +
Sbjct: 634 SMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK 693
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+KP+ I+Y +++ AY + + I ++ NS ++ D +N I +Y E+
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQ 451
+ M + C P+ T+ +++ Y L + A+
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 159/369 (43%), Gaps = 3/369 (0%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
+ K + A+ IF +R C TF + M G + + +F+ + GL P +
Sbjct: 396 RAGKVESAMSIFEEMRNAGCKPNIC-TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+ L++ +GQ+G+ E +MK P+ T++ LI + ++ F+ +
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYR 513
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
M G+ TYNT++ + +E+ E + M E G C P+ T S++ AY N
Sbjct: 514 RMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANG 572
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
I M E ++ L L + + + +++R F P + T
Sbjct: 573 KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTL 632
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N ++ +G+ + K MK RG P+ TY SL+ +S++ K + ILR++
Sbjct: 633 NSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA 692
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
+ D +N +I AY + + +F M+ VPD IT+ T I +Y A M E
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 450 AQNLENKMI 458
A + MI
Sbjct: 753 AIGVVRYMI 761
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 121/295 (41%), Gaps = 39/295 (13%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
+TF L+ +C EQA ++ ML G+ P + Y +++A + G+ +++ + +
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLG-IECSAVTYNTIIDGYGKA 233
M+ CKP+ TY L+ + L+ LAE Y G IE AV T++ K
Sbjct: 550 MED-GRCKPNELTYCSLLHAYANGKEIGLMHS-LAEEVYSGVIEPRAVLLKTLVLVCSKC 607
Query: 234 KKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGN------------------------- 268
E E +FS + E G PDI TLNSM+S YG
Sbjct: 608 DLLPEAERAFSELKERG-FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 269 ----------SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQ 318
S + K E+ E G+K DI + N + +Y R + M+
Sbjct: 667 YNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMR 726
Query: 319 KRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSK 373
P V+TYN I ++ E+ + M G +PN TY S+V Y K
Sbjct: 727 NSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 152 bits (383), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 181/379 (47%), Gaps = 12/379 (3%)
Query: 87 EAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLF---EVMLSD 143
+++ Q+ WQ AL++F L + W+ + ++ +LG+ Q A +F E + D
Sbjct: 164 KSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGD 223
Query: 144 GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRF-- 201
V VY A++ Y +SG +A ++ M+ C PD+ +++ LI + K
Sbjct: 224 ----RVQVYNAMMGVYSRSGKFSKAQELVDAMRQ-RGCVPDLISFNTLINARLKSGGLTP 278
Query: 202 DLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNS 261
+L ++L + G+ A+TYNT++ + + F M E+ C PD++T N+
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNA 337
Query: 262 MISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRF 321
MIS YG G + E+ + E L G D T N L ++ R +K++ V MQK
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 322 FFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH-RGMKPNSITYCSLVSAYSKAGLIMKV 380
F +TYN +I +GK G ++ + +K MK G P++ITY L+ + KA ++
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
+++ ++ + + ++ +I Y +AG E+ + F M PDN+ ++ M+
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 441 YNALGMTEAAQNLENKMIA 459
T A L MI+
Sbjct: 518 LLRGNETRKAWGLYRDMIS 536
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 160/352 (45%), Gaps = 3/352 (0%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
KQK WQ A + G LRQ +T+ LM +C E+A +F M+ DG P+V
Sbjct: 764 KQKLWQKAESVVGNLRQSG-RTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+ L+ A G L+E + + +++ + K + +++ + + ++KI +
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMG-FKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
M G + Y +I+ K K+ + E S M E ++ NSM+ Y
Sbjct: 882 SMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLKMYTAI 940
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
+ +K + Y G++ D T N L Y R ++ +M M+ P + TY
Sbjct: 941 EDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTY 1000
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
+I FGK +E+ E+ F+++ +G+K + Y +++ +G K + +L+ ++N
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN 1060
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
+ + + ++ +Y +G+ ++ ++ +K+ + ++++I AY
Sbjct: 1061 AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY 1112
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 115/233 (49%), Gaps = 2/233 (0%)
Query: 209 AEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGN 268
AE CS + Y II+ YGK K +++ ES + +SG PD+ T NS++SAY
Sbjct: 742 AETKGFHFACSPM-YTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLMSAYAQ 799
Query: 269 SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVT 328
G E+ +N G ++++NIL + G +++ V++ +Q F + +
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 329 YNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
++++ F +AG+I ++++ + MK G P Y ++ K + + ++ ++E
Sbjct: 860 ILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME 919
Query: 389 NSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
++ ++ +N ++ Y D +K +++ +KE PD T+ T+I Y
Sbjct: 920 EANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMY 972
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 148/337 (43%), Gaps = 2/337 (0%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK 176
+T ++ GK K ++A + + G P + + +L+SAY Q G + A + N M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 177 SVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKF 236
P V + +IL+ + R + + ++ E+ +G + S + ++D + +A
Sbjct: 815 R-DGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 237 EEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNI 296
E++ +S+M ++ G P I MI + E +E K ++ N
Sbjct: 874 FEVKKIYSSM-KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNS 932
Query: 297 LTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRG 356
+ K Y Y K V +++ P TYN +I + + E+ ++M++ G
Sbjct: 933 MLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG 992
Query: 357 MKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMG 416
+ P TY SL+SA+ K + + + + ++ + + LD F++ ++ +G K
Sbjct: 993 LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 417 ELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
+L MK P T ++ +Y++ G + A+ +
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKV 1089
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 2/293 (0%)
Query: 96 LALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTAL 155
LA+++ ++R + T+ L+ + + A +FE M + +P + Y A+
Sbjct: 280 LAVELLDMVRNSG-LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 156 VSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLG 215
+S YG+ GL EA +++ + PD TY+ L+ + + + ++++ +M +G
Sbjct: 339 ISVYGRCGLAAEAERLFMELE-LKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 216 IECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKM 275
+TYNTII YGK + + + M G +PD T +I + G + +
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEA 457
Query: 276 EKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIET 335
+E +G+K +QT + L Y +AG ++ M + P + Y+++++
Sbjct: 458 AALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDV 517
Query: 336 FGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
+ K ++ M G P+ Y ++ K + +R +E
Sbjct: 518 LLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/374 (19%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 132 QASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS---DCKPDVYTY 188
+AS +F + G + S V ++V Y + G + A +N ++ C P Y
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MY 755
Query: 189 SILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVE 248
+ +I++ K + E ++ + G T+N+++ Y + +E + F+ M+
Sbjct: 756 TDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMR 815
Query: 249 SGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYD 308
G P + ++N ++ A G +E++ E MG K ++ ++ ++ RAG
Sbjct: 816 DGP-SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 309 KMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME---------------------- 346
+++ + M+ + PT+ Y ++IE K + E
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 347 -------------EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN--SD 391
+ ++++K G++P+ TY +L+ Y + + +++Q+ N D
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 392 VILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQ 451
LDT + +ISA+G+ +E+ +LF + + D + TM++ G A+
Sbjct: 995 PKLDT--YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 452 NLENKMIAMKENSG 465
K++ M +N+G
Sbjct: 1053 ----KLLQMMKNAG 1062
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
Query: 291 IQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEK--MEEY 348
+Q N + Y R+G + K + ++D M++R P ++++N +I K+G + E
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 349 FKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQ 408
+++ G++P++ITY +L+SA S+ + + +E D +N +IS YG+
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 409 AGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
G + LF+ ++ + PD +T+ +++ A+ TE + + +M M
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM 396
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 132/291 (45%), Gaps = 8/291 (2%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
Y + + ++ +L K K+ A ++ M K + ++ +++ Y +++
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA---IEDYK 944
Query: 170 STINDMKSVSDC--KPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTII 227
T+ + + + +PD TY+ LI + R + ++ +M LG++ TY ++I
Sbjct: 945 KTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLI 1004
Query: 228 DGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGV 287
+GK K E+ E F ++ S G D ++M+ +SG+ K EK G+
Sbjct: 1005 SAFGKQKCLEQAEQLFEELL-SKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 288 KADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEE 347
+ + T+++L SY +G + V+ ++ T + Y+ VI+ + ++ E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 348 YFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+MK G++P+ + V A S + ++V +L+ +E D+ D P
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALE--DIGFDLPI 1172
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 135/346 (39%), Gaps = 47/346 (13%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK 176
++ ++ +L + + +A L+ M+SDG PS +Y ++ + D+ TI DM+
Sbjct: 511 YSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME 570
Query: 177 SVSDCKPDVYTYSILIKS-CTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ P + S+L+K C FDL + L G E T +I+ Y + +
Sbjct: 571 ELCGMNP-LEISSVLVKGEC-----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGR 624
Query: 236 FEEMESSFSAMVESGGCHPDIFT---------LNSMISA--------------YGNSGNI 272
E + E + T +N++ +A +G+S
Sbjct: 625 HSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMY 684
Query: 273 EKM-------------EKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQ- 318
E + + +++ L G +A + Y + G + V++ +
Sbjct: 685 ETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAET 744
Query: 319 KRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIM 378
K F F Y +IE +GK +K E ++ G P+ T+ SL+SAY++ G
Sbjct: 745 KGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYE 804
Query: 379 KVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKE 424
+ +I + N ++ A G +E EL++ ++E
Sbjct: 805 RARAIFNTMMRDGPSPTVESINILLHALCVDGRLE---ELYVVVEE 847
>sp|Q9FLD8|PP408_ARATH Pentatricopeptide repeat-containing protein At5g39980,
chloroplastic OS=Arabidopsis thaliana GN=At5g39980 PE=2
SV=1
Length = 678
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 179/395 (45%), Gaps = 39/395 (9%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ WQ +L + + ++ Y + ++ + + KQ + A LF+ M L P
Sbjct: 131 RENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDR 190
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
Y+ L++++G+ G+ D A S + M+ D+ YS LI+ + + I +
Sbjct: 191 YTYSTLITSFGKEGMFDSALSWLQKMEQ-DRVSGDLVLYSNLIELSRRLCDYSKAISIFS 249
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG------------------- 250
+ GI V YN++I+ YGKAK F E M E+G
Sbjct: 250 RLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENH 309
Query: 251 ---------------GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
C D+ T N MI YG +++ ++ + M ++ ++ + N
Sbjct: 310 KFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYN 369
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ + YG A ++ + + MQ++ VVTYN +I+ +GK EK ++M+ R
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G++PN+ITY +++S + KAG + + ++ +++ +S V +D + +I AY + G +
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAA 450
L +K +PDNI T I G TE A
Sbjct: 490 KRLLHELK----LPDNIPRETAITILAKAGRTEEA 520
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 163/361 (45%), Gaps = 8/361 (2%)
Query: 99 KIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLK--PSVDVYTALV 156
++F LL Y+ R Q + MV L + Q SL + + K PSV Y ++
Sbjct: 107 ELFSLLST---YKDR-QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVL 162
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
++ D A ++M+ + PD YTYS LI S K FD L +M +
Sbjct: 163 RNVLRAKQFDIAHGLFDEMRQRA-LAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRV 221
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKME 276
V Y+ +I+ + + + S FS + SG PD+ NSMI+ YG + +
Sbjct: 222 SGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSG-ITPDLVAYNSMINVYGKAKLFREAR 280
Query: 277 KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETF 336
E N GV + + + L Y + + SV M++ + T NI+I+ +
Sbjct: 281 LLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVY 340
Query: 337 GKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDT 396
G+ +++ + F ++ ++PN ++Y +++ Y +A L + + R ++ D+ +
Sbjct: 341 GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNV 400
Query: 397 PFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENK 456
+N +I YG+ + EK L M+ R P+ IT++T+I + G + A L K
Sbjct: 401 VTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQK 460
Query: 457 M 457
+
Sbjct: 461 L 461
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 144/334 (43%), Gaps = 37/334 (11%)
Query: 125 GKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPD 184
G+ ++A LF + ++P+V Y ++ YG++ L EA M+ D + +
Sbjct: 341 GQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR-KDIEQN 399
Query: 185 VYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFS 244
V TY+ +IK K + ++ EM GIE +A+TY+TII +GKA K + + F
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ 459
Query: 245 AMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL-------------------- 284
+ S G D +MI AY G + ++ +E L
Sbjct: 460 KL-RSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 518
Query: 285 -----------MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVI 333
G DI + Y R Y + V + M+ +FP +V+
Sbjct: 519 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVL 578
Query: 334 ETFGKAGHIEKMEEYFKKMKHRG-MKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDV 392
+GK EK + +++M+ G + P+ + + ++S YS V+S+ +++E SD
Sbjct: 579 NAYGKQREFEKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLE-SDP 636
Query: 393 ILDTPFFNCIISA-YGQAGDVEKMGELFLTMKER 425
+++ + +++A Y +A + + M+ER
Sbjct: 637 NVNSKELHLVVAALYERADKLNDASRVMNRMRER 670
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 165/338 (48%), Gaps = 15/338 (4%)
Query: 63 NIEKKVSSKKYKNLWPKPVLEAL------------DEAIKQ-KKWQLALKIFGLLRQQQW 109
+I + VSS + W EAL ++ +KQ + AL F L++Q
Sbjct: 300 HIVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPG 359
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
++ T+T ++ LG+ KQ + L + M+ DG +P+ Y L+ +YG++ L+EA
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
+ N M+ + CKPD TY LI K D+ + M G+ TY+ II+
Sbjct: 420 NVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
GKA F MV+ GC P++ T N M+ + + N + K Y + G +
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
D T +I+ + G G ++ +V MQ++ + P Y ++++ +GKAG++EK +++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQV 387
+ M H G++PN T SL+S + + I + +L+ +
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 182 KPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMES 241
K D +TY+ ++ + + +F I K+L EM G + + VTYN +I YG+A E +
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 242 SFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSY 301
F+ M E+G C PD T ++I + +G ++ Y G+ D T +++
Sbjct: 421 VFNQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 302 GRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
G+AG + M + P +VTYNI+++ KA + + + ++ M++ G +P+
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLT 421
+TY ++ G + + +++ +++ + I D P + ++ +G+AG+VEK + +
Sbjct: 540 VTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQA 599
Query: 422 MKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
M P+ T +++ + + A L M+A+
Sbjct: 600 MLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLAL 638
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 215 GIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEK 274
G + TY T++ G+AK+F + MV G C P+ T N +I +YG + + +
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDG-CQPNTVTYNRLIHSYGRANYLNE 417
Query: 275 MEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIE 334
+N+ G K D T L + +AG D + MQ P TY+++I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 335 TFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVIL 394
GKAGH+ + F +M +G PN +TY ++ ++KA + R ++N+
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 395 DTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLE 454
D ++ ++ G G +E+ +F M++++ +PD + ++ + G E A
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 455 NKMI 458
M+
Sbjct: 598 QAML 601
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 115/263 (43%), Gaps = 9/263 (3%)
Query: 198 FHRFDLIEKILAEMSYLGIECSAVTYNTII---DGYGKAKKFEEMESSFSAMVESGGCHP 254
RF + LG+ A N ++ + YG A F F + G
Sbjct: 309 LRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGF------FYWLKRQPGFKH 362
Query: 255 DIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVM 314
D T +M+ G + + K +E G + + T N L SYGRA ++ +V
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 315 DFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKA 374
+ MQ+ P VTY +I+ KAG ++ + +++M+ G+ P++ TY +++ KA
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 375 GLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITF 434
G + + ++ + + +N ++ + +A + + +L+ M+ PD +T+
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 435 ATMIQAYNALGMTEAAQNLENKM 457
+ +++ G E A+ + +M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEM 565
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 53/107 (49%)
Query: 353 KHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDV 412
+ G K + TY ++V +A ++ +L ++ +T +N +I +YG+A +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 413 EKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
+ +F M+E C PD +T+ T+I + G + A ++ +M A
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 83 EALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLS 142
EA+ ++QK W ++GLL + + GK E+A ++ ML
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLL----------------VDLWGKAGNVEKAWQWYQAMLH 602
Query: 143 DGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCT 196
GL+P+V +L+S + + + EA+ + +M ++ +P + TY++L+ CT
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG-LRPSLQTYTLLLSCCT 655
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130
OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1
Length = 591
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 184/390 (47%), Gaps = 39/390 (10%)
Query: 91 QKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVD 150
KKW + + + ++ +Q F L+ G+ Q ++A L+ +L P+ D
Sbjct: 132 NKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTED 191
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKS--------------------------------- 177
Y L+ AY +GL++ A + +M++
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDV 251
Query: 178 -----VSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGK 232
CKP TY+++I K + + K+ EM + + TY +++ + +
Sbjct: 252 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAR 311
Query: 233 AKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQ 292
E+ E F + E G PD++ N+++ +Y +G + ++ MG + D
Sbjct: 312 EGLCEKAEEIFEQLQEDG-LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRA 370
Query: 293 TLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKM 352
+ NI+ +YGRAG++ +V + M++ PT+ ++ +++ + KA + K E K+M
Sbjct: 371 SYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 353 KHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDV 412
G++P++ S+++ Y + G K++ IL ++EN D +N +I+ YG+AG +
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 413 EKMGELFLTMKERHCVPDNITFATMIQAYN 442
E++ ELF+ +KE++ PD +T+ + I AY+
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 165/320 (51%), Gaps = 6/320 (1%)
Query: 107 QQWYQARC----QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQS 162
Q+ + RC +T+ ++ + GK + + L+ M S KP++ YTALV+A+ +
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 163 GLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVT 222
GL ++A ++ +PDVY Y+ L++S ++ +I + M ++G E +
Sbjct: 313 GLCEKAEEIFEQLQE-DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRAS 371
Query: 223 YNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEF 282
YN ++D YG+A + E+ F M + G P + + ++SAY + ++ K E E
Sbjct: 372 YNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEM 430
Query: 283 NLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHI 342
+ GV+ D LN + YGR G + KM ++ M+ + TYNI+I +GKAG +
Sbjct: 431 SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFL 490
Query: 343 EKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCI 402
E++EE F ++K + +P+ +T+ S + AYS+ L +K + ++ +S D +
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVL 550
Query: 403 ISAYGQAGDVEKMGELFLTM 422
+SA VE++ + TM
Sbjct: 551 LSACSSEEQVEQVTSVLRTM 570
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 145/287 (50%), Gaps = 3/287 (1%)
Query: 86 DEAIKQ-KKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
++ +KQ + AL F L++Q ++ T+T ++ LG+ KQ + + L + M+ DG
Sbjct: 330 NQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG 389
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
KP+ Y L+ +YG++ L EA + N M+ + C+PD TY LI K D+
Sbjct: 390 CKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQE-AGCEPDRVTYCTLIDIHAKAGFLDIA 448
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
+ M G+ TY+ II+ GKA F MV G C P++ T N MI+
Sbjct: 449 MDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMIA 507
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ + N E K Y + G + D T +I+ + G G ++ V MQ++ + P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAY 371
Y ++++ +GKAG+++K ++++ M G++PN T SL+S +
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 1/279 (0%)
Query: 182 KPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMES 241
K D +TY+ ++ + + +F I K+L EM G + + VTYN +I YG+A +E +
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMN 415
Query: 242 SFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSY 301
F+ M E+G C PD T ++I + +G ++ Y G+ D T +++
Sbjct: 416 VFNQMQEAG-CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 302 GRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
G+AG + M + P +VT+NI+I KA + E + ++ M++ G +P+
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDK 534
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLT 421
+TY ++ G + + + + +++ + + D P + ++ +G+AG+V+K + +
Sbjct: 535 VTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQA 594
Query: 422 MKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
M + P+ T +++ + + A NL M+A+
Sbjct: 595 MLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 113/244 (46%), Gaps = 1/244 (0%)
Query: 215 GIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEK 274
G + TY T++ G+AK+F E+ MV G C P+ T N +I +YG + +++
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKE 412
Query: 275 MEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIE 334
+N+ G + D T L + +AG D + MQ+ P TY+++I
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 335 TFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVIL 394
GKAGH+ F +M +G PN +T+ +++ ++KA + R ++N+
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 395 DTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLE 454
D ++ ++ G G +E+ +F M+ ++ VPD + ++ + G + A
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 455 NKMI 458
M+
Sbjct: 593 QAML 596
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 263 ISAYGNSGNIEKMEKWYNEFNLM-------GVKADIQTLNILTKSYGRAGMYDKMRSVMD 315
+ AY + +++M+ + N G K D T + + GRA + ++ ++D
Sbjct: 324 MDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLD 383
Query: 316 FMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAG 375
M + P VTYN +I ++G+A ++++ F +M+ G +P+ +TYC+L+ ++KAG
Sbjct: 384 EMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG 443
Query: 376 LIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
+ + ++++ + + DT ++ II+ G+AG + LF M + C P+ +TF
Sbjct: 444 FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
Query: 436 TMIQAYNALGMTEAAQNLENKMIAMKENSG 465
MI + E A L M +N+G
Sbjct: 504 IMIALHAKARNYETALKLYRDM----QNAG 529
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
K + ++ ALK++ + Q +Q T++ +M +LG C E+A +F M P
Sbjct: 511 KARNYETALKLYRDM-QNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
VY LV +G++G +D+A+ M + +P+V T + L+ + + HR +L
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQ-AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHP 254
M LG+ S TY ++ A+ +M M SG HP
Sbjct: 629 SMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSG--HP 671
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 176/390 (45%), Gaps = 40/390 (10%)
Query: 104 LRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSG 163
+R W T+ L L K + A +FE M SDG+ P+ + LVS++ + G
Sbjct: 99 IRHSFW------TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKG 152
Query: 164 -------LLDEAF-------------STINDMKSVSD-------------CKPDVYTYSI 190
LL ++F +T+ + V D C D T++I
Sbjct: 153 KLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNI 211
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
LI+ + + ++L MS G E VTYNT+I G+ K+ + + F +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
C PD+ T SMIS Y +G + + ++ +G+ T N+L Y +AG
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
+ M FP VVT+ +I+ + + G + + +++M RGM PN+ TY L++A
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPD 430
++K +L Q+ + D+I +N +I + +AG V + + M+++ C PD
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 431 NITFATMIQAYNALGMTEAAQNLENKMIAM 460
ITF +I + G A ++ +KM+A+
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAI 481
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 145/354 (40%), Gaps = 5/354 (1%)
Query: 102 GLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQ 161
LL Q + C L+ L K + E A LF+ L + L+
Sbjct: 159 ALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 162 SGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECS-- 219
G ++A + M C+PD+ TY+ LI+ K + + ++ ++ G CS
Sbjct: 219 VGKAEKALELLGVMSGFG-CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS-GSVCSPD 276
Query: 220 AVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWY 279
VTY ++I GY KA K E S M+ G +P T N ++ Y +G + E+
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLG-IYPTNVTFNVLVDGYAKAGEMLTAEEIR 335
Query: 280 NEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKA 339
+ G D+ T L Y R G + + + M R FP TY+I+I
Sbjct: 336 GKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNE 395
Query: 340 GHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFF 399
+ K E ++ + + P Y ++ + KAG + + + I+ ++E D F
Sbjct: 396 NRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Query: 400 NCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
+I + G + + +F M C PD IT ++++ GM + A +L
Sbjct: 456 TILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 165/345 (47%), Gaps = 37/345 (10%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
+ ++L +++ S G+ P V Y +L+ Y + GL+ A ++DM++ CKP+VY+Y+I
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN-KGCKPNVYSYTI 429
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
L+ K + D +L EMS G++ + V +N +I + K + E F M G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 251 GCHPDIFTLNSMIS-----------------------------------AYGNSGNIEKM 275
C PD++T NS+IS A+ G I++
Sbjct: 490 -CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEA 548
Query: 276 EKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIET 335
K NE G D T N L K RAG DK RS+ + M + P+ ++ NI+I
Sbjct: 549 RKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 336 FGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILD 395
++G +E+ E+ K+M RG P+ +T+ SL++ +AG I ++ R+++ + D
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 396 TPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
T FN ++S + G V L E VP++ T++ ++Q+
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 160/342 (46%), Gaps = 5/342 (1%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK 176
+ L+ L KC + +A L E M G P + + ++ + ++EA +N M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 177 SVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKF 236
+ PD TY L+ K R D + + + I V +NT+I G+ +
Sbjct: 315 -IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI----VIFNTLIHGFVTHGRL 369
Query: 237 EEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNI 296
++ ++ S MV S G PD+ T NS+I Y G + + ++ G K ++ + I
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 297 LTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRG 356
L + + G D+ +V++ M P V +N +I F K I + E F++M +G
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 357 MKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMG 416
KP+ T+ SL+S + I +LR + + V+ +T +N +I+A+ + G++++
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 417 ELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
+L M + D IT+ ++I+ G + A++L KM+
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/364 (17%), Positives = 156/364 (42%), Gaps = 6/364 (1%)
Query: 97 ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALV 156
++++F Q Y+ + L+ LG + + L M +G+ ++ +++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
Y ++G + + +M++V C+P +Y+++++ + + + +M I
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKME 276
+ T+ ++ + + + S M + G C P+ ++I + + +
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 277 KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETF 336
+ E LMG D +T N + + ++ +++ M R F P +TY ++
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 337 GKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENS-DVILD 395
K G ++ ++ F +R KP + + +L+ + G + ++L + S ++ D
Sbjct: 333 CKIGRVDAAKDLF----YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 396 TPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLEN 455
+N +I Y + G V E+ M+ + C P+ ++ ++ + LG + A N+ N
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 456 KMIA 459
+M A
Sbjct: 449 EMSA 452
>sp|Q8RWS8|PP199_ARATH Pentatricopeptide repeat-containing protein At2g41720
OS=Arabidopsis thaliana GN=EMB2654 PE=2 SV=1
Length = 822
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 176/368 (47%), Gaps = 9/368 (2%)
Query: 79 KPVLEALDEAI----KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQAS 134
KP E D I + +W+ A+ + + + +R T+ L+ G +A
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSR-STYNNLINACGSSGNWREAL 233
Query: 135 LLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKS 194
+ + M +G+ P + + ++SAY +A S MK + +PD T++I+I
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG-AKVRPDTTTFNIIIYC 292
Query: 195 CTKFHRFDLIEKILAEMSYLGIEC--SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGC 252
+K + + M EC VT+ +I+ Y + E + F AMV + G
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMV-AEGL 351
Query: 253 HPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRS 312
P+I + N+++ AY G + G+ D+ + L SYGR+ K +
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 313 VMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYS 372
V M+K P VVTYN +I+ +G G + + E F++M+ G+KPN ++ C+L++A S
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 373 KAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNI 432
++ + VD++L ++ + L+T +N I +Y A ++EK L+ +M+++ D++
Sbjct: 472 RSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSV 531
Query: 433 TFATMIQA 440
TF +I
Sbjct: 532 TFTILISG 539
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 183/394 (46%), Gaps = 11/394 (2%)
Query: 67 KVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGK 126
+V + +++ W V E +D + +W+ ++ G+L AR + F L+ L +
Sbjct: 66 RVENDRFQKDWS--VSEVVDRLMALNRWE---EVDGVLNSWVGRFAR-KNFPVLIRELSR 119
Query: 127 CKQPEQASLLFEVM-LSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDV 185
E +F+ M + D+Y ++ + + +D+A +M+ S CKPD
Sbjct: 120 RGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWS-CKPDA 178
Query: 186 YTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSA 245
TY LI + + ++ ++ +M I S TYN +I+ G + + E
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 246 MVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG 305
M ++G PD+ T N ++SAY + K ++ V+ D T NI+ + G
Sbjct: 239 MTDNG-VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 297
Query: 306 MYDKMRSVMDFMQKRFF--FPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSIT 363
+ + + M+++ P VVT+ ++ + G IE F+ M G+KPN ++
Sbjct: 298 QSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVS 357
Query: 364 YCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMK 423
Y +L+ AY+ G+ S+L ++ + +I D + C++++YG++ K E+FL M+
Sbjct: 358 YNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMR 417
Query: 424 ERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
+ P+ +T+ +I AY + G A + +M
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM 451
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 165/351 (47%), Gaps = 44/351 (12%)
Query: 97 ALKIFGLLRQQQWYQARCQ----TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVY 152
AL +F +R+++ A C+ TFT +M + + E +FE M+++GLKP++ Y
Sbjct: 302 ALDLFNSMREKR---AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 153 TALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMS 212
AL+ AY G+ A S + D+K + PDV
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQ-NGIIPDV--------------------------- 390
Query: 213 YLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNI 272
V+Y +++ YG++++ + + F M+ P++ T N++I AYG++G +
Sbjct: 391 --------VSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 273 EKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIV 332
+ + + + G+K ++ ++ L + R+ + +V+ Q R YN
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 333 IETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDV 392
I ++ A +EK ++ M+ + +K +S+T+ L+S + + S L+++E+ +
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 393 ILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNA 443
L ++ ++ AY + G V + +F MK C PD I + +M+ AYNA
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 4/207 (1%)
Query: 255 DIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVM 314
DI+ N MI + +++ + E K D +T + L ++GRAG + ++M
Sbjct: 144 DIY--NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 315 DFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKA 374
D M + P+ TYN +I G +G+ + E KKM G+ P+ +T+ ++SAY
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 375 GLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERH--CVPDNI 432
K S ++ + V DT FN II + G + +LF +M+E+ C PD +
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 433 TFATMIQAYNALGMTEAAQNLENKMIA 459
TF +++ Y+ G E + + M+A
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVA 348
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 140/352 (39%), Gaps = 38/352 (10%)
Query: 97 ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALV 156
A++IF + +Q + + L+ + K+ + S G+ + Y + +
Sbjct: 444 AVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
+Y + L++A + M+ K D T++ILI + ++ L EM L I
Sbjct: 503 GSYINAAELEKAIALYQSMRK-KKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKME 276
+ Y++++ Y K + E ES F+ M + GC PD+ SM+ AY S K
Sbjct: 562 PLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 277 KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR-------FFFP----- 324
+ + E G++ D + L +++ + G + +MD M+++ FF
Sbjct: 621 ELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSAC 680
Query: 325 -----------------------TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
++ N ++ FGK+G +E M + F K+ G+ N
Sbjct: 681 NTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINL 740
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVE 413
TY L+ G K +L + + + + IIS ++ +E
Sbjct: 741 KTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE 792
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 8/347 (2%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
++ TKLM L + +P++A +F ++ +G KPS+ YT LV+A + S I+
Sbjct: 320 RSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISK 379
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
++ + KPD ++ +I + ++ D KI +M G + +A T+NT+I GYGK
Sbjct: 380 VEK-NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIG 438
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
K EE M+ P+ T N ++ A+ N IE+ + GVK D+ T
Sbjct: 439 KLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF 498
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFF----PTVVTYNIVIETFGKAGHIEKMEEYFK 350
N L K+Y R G + D + R P V T ++ + + G +E+ +F
Sbjct: 499 NTLAKAYARIG---STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFY 555
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+MK G+ PN + SL+ + + V ++ +E V D F+ +++A+ G
Sbjct: 556 RMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Query: 411 DVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
D+++ E++ M E PD F+ + + Y G E A+ + N+M
Sbjct: 616 DMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 157/344 (45%), Gaps = 15/344 (4%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
+QA +FE M G KP+ + L+ YG+ G L+E+ ++ M +P+ T +I
Sbjct: 406 DQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
L+++ + + I+ +M G++ VT+NT+ Y + E +
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
P++ T ++++ Y G +E+ +++ +GV ++ N L K + D +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
V+D M++ P VVT++ ++ + G +++ EE + M G+ P+ + L
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHC--- 427
Y++AG K + IL Q+ V + + IIS + AG+++K +++ M C
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM----CGIV 701
Query: 428 --VPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSGKKLI 469
P+ T+ T+I + A+ L +K+ GK ++
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEEL------LKDMEGKNVV 739
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 156/341 (45%), Gaps = 8/341 (2%)
Query: 99 KIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSA 158
++ ++ + + Q +T L+ ++ E+A + M S G+KP V + L A
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 159 YGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIEC 218
Y + G A I + KP+V T ++ + + + + M LG+
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
+ +N++I G+ + + M E G PD+ T +++++A+ + G++++ E+
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLM-EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
Y + G+ DI +IL K Y RAG +K +++ M+K P VV Y +I +
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 339 AGHIEKMEEYFKKM-KHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTP 397
AG ++K + +KKM G+ PN TY +L+ + +A K + +L+ +E +V+
Sbjct: 684 AGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRK 743
Query: 398 FFNCIISAYGQAG-----DVEKMGELFLTMKERHCVPDNIT 433
I + G D +G F T + + +P+NI
Sbjct: 744 TMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLN-IPNNIA 783
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 101/214 (47%), Gaps = 2/214 (0%)
Query: 242 SFSAMVESGGCH-PDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKS 300
SF ++ SGG D+ + +++ G ++ +N G K + T L +
Sbjct: 304 SFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTA 363
Query: 301 YGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPN 360
R + + S++ ++K P + +N +I ++G++++ + F+KMK G KP
Sbjct: 364 LTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPT 423
Query: 361 SITYCSLVSAYSKAGLIMKVDSILRQVENSDVIL-DTPFFNCIISAYGQAGDVEKMGELF 419
+ T+ +L+ Y K G + + +L + +++ + N ++ A+ +E+ +
Sbjct: 424 ASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIV 483
Query: 420 LTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
M+ PD +TF T+ +AY +G T A+++
Sbjct: 484 YKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM 517
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%)
Query: 340 GHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFF 399
G ++ F + G KP+ ITY +LV+A ++ + S++ +VE + + DT F
Sbjct: 333 GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF 392
Query: 400 NCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
N II+A ++G++++ ++F MKE C P TF T+I+ Y +G E + L + M+
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMML 451
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 172/379 (45%), Gaps = 38/379 (10%)
Query: 97 ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALV 156
AL++ G+ Q A+ T ++ L + +A LFE + G+KP Y AL+
Sbjct: 288 ALQLLGMA-QATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 346
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIE----------- 205
Y ++G L +A S +++M+ PD +TYS+LI + R++
Sbjct: 347 KGYVKTGPLKDAESMVSEMEK-RGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV 405
Query: 206 ------------------------KILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMES 241
++L EM +G++ YN +ID +GK + +
Sbjct: 406 QPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT 465
Query: 242 SFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSY 301
+F M+ S G PD T N++I + G E+ + G T NI+ SY
Sbjct: 466 TFDRML-SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSY 524
Query: 302 GRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
G +D M+ ++ M+ + P VVT+ +++ +GK+G E ++MK G+KP+S
Sbjct: 525 GDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSS 584
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLT 421
Y +L++AY++ GL + + R + + + N +I+A+G+ + +
Sbjct: 585 TMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY 644
Query: 422 MKERHCVPDNITFATMIQA 440
MKE PD +T+ T+++A
Sbjct: 645 MKENGVKPDVVTYTTLMKA 663
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 149/338 (44%), Gaps = 2/338 (0%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
Q +++ K P +A L + + GL +++SA SG EA + +
Sbjct: 270 QLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEE 329
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
++ S KP Y+ L+K K E +++EM G+ TY+ +ID Y A
Sbjct: 330 LRQ-SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
++E M E+G P+ F + +++ + + G +K + E +GVK D Q
Sbjct: 389 RWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N++ ++G+ D + D M P VT+N +I+ K G EE F+ M+
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
RG P + TY ++++Y + +L ++++ ++ + ++ YG++G
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQN 452
E MK P + + +I AY G++E A N
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 151/316 (47%), Gaps = 2/316 (0%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
T++ L+ + E A ++ + M + ++P+ V++ L++ + G + F + +
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
MKS+ KPD Y+++I + KF+ D M GIE VT+NT+ID + K
Sbjct: 435 MKSIG-VKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
+ E F AM E GC P T N MI++YG+ + M++ + G+ ++ T
Sbjct: 494 RHIVAEEMFEAM-ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
L YG++G ++ ++ M+ P+ YN +I + + G E+ F+ M
Sbjct: 553 TTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS 612
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
G+KP+ + SL++A+ + + ++L+ ++ + V D + ++ A + +K
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 415 MGELFLTMKERHCVPD 430
+ ++ M C PD
Sbjct: 673 VPVVYEEMIMSGCKPD 688
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 9/343 (2%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK 176
++ L+ LG+ ++ +A LL + L P Y AL+ A ++ +++A + I M+
Sbjct: 170 YSILIHALGRSEKLYEAFLLSQ---KQTLTPLT--YNALIGACARNNDIEKALNLIAKMR 224
Query: 177 SVSDCKPDVYTYSILIKSCTKFHRFD--LIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
+ D YS++I+S T+ ++ D ++ ++ E+ +E N II G+ K+
Sbjct: 225 Q-DGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
M ++ G TL S+ISA +SG + E + E G+K +
Sbjct: 284 D-PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N L K Y + G S++ M+KR P TY+++I+ + AG E K+M+
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
++PNS + L++ + G K +L+++++ V D F+N +I +G+ ++
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
F M PD +T+ T+I + G A+ + M
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 137/293 (46%), Gaps = 23/293 (7%)
Query: 86 DEAIKQKKWQL--ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSD 143
D QK +Q+ +K G+ +Q+Y TF GK + A F+ MLS+
Sbjct: 421 DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF-------GKFNCLDHAMTTFDRMLSE 473
Query: 144 GLKPSVDVYTALVSAYGQSG---LLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHR 200
G++P + L+ + + G + +E F + C P TY+I+I S R
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER----RGCLPCATTYNIMINSYGDQER 529
Query: 201 FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLN 260
+D ++++L +M GI + VT+ T++D YGK+ +F + M +S G P N
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM-KSVGLKPSSTMYN 588
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLM---GVKADIQTLNILTKSYGRAGMYDKMRSVMDFM 317
++I+AY G E+ N F +M G+K + LN L ++G + +V+ +M
Sbjct: 589 ALINAYAQRG---LSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Query: 318 QKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
++ P VVTY +++ + +K+ +++M G KP+ L SA
Sbjct: 646 KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 141/310 (45%), Gaps = 7/310 (2%)
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAE 210
+Y+ L+ A G+S L EAF ++ ++++ TY+ LI +C + + + ++A+
Sbjct: 169 LYSILIHALGRSEKLYEAF-LLSQKQTLTPL-----TYNALIGACARNNDIEKALNLIAK 222
Query: 211 MSYLGIECSAVTYNTIIDGYGKAKKFEE-MESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
M G + V Y+ +I ++ K + M +E D+ +N +I + S
Sbjct: 223 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
G+ K + G+ A TL + + +G + ++ + +++ P Y
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +++ + K G ++ E +M+ RG+ P+ TY L+ AY AG +L+++E
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
DV ++ F+ +++ + G+ +K ++ MK PD + +I + +
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 450 AQNLENKMIA 459
A ++M++
Sbjct: 463 AMTTFDRMLS 472
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 137 bits (345), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 155/287 (54%), Gaps = 2/287 (0%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
+Q + F+ M +G++P + +L++ + GL + A + ++M + + DV++Y+
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFSYNT 379
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
L+ + K + DL +ILA+M I + V+Y+T+IDG+ KA +F+E + F M
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYL 438
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
G D + N+++S Y G E+ E +G+K D+ T N L YG+ G YD++
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
+ V M++ P ++TY+ +I+ + K G ++ E F++ K G++ + + Y +L+ A
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGE 417
K GL+ S++ ++ + + +N II A+G++ +++ +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 187/397 (47%), Gaps = 45/397 (11%)
Query: 118 TKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKS 177
+ ++ LG+ + A +FE + G +V ++AL+SAYG+SGL +EA S N MK
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 178 VSDCKPDVYTYSILIKSCTKFH-RFDLIEKILAEMSYLGIECSAVTYNTII-----DGYG 231
+P++ TY+ +I +C K F + K EM G++ +T+N+++ G
Sbjct: 297 YG-LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW 355
Query: 232 KAKK--FEEMES--------SFSAMVES---GG----------------CHPDIFTLNSM 262
+A + F+EM + S++ ++++ GG P++ + +++
Sbjct: 356 EAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 263 ISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFF 322
I + +G ++ + E +G+ D + N L Y + G ++ ++ M
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI 475
Query: 323 FPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDS 382
VVTYN ++ +GK G +++++ F +MK + PN +TY +L+ YSK GL +
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535
Query: 383 ILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYN 442
I R+ +++ + D ++ +I A + G V L M + P+ +T+ ++I A+
Sbjct: 536 IFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFG 595
Query: 443 ALGMTEAAQNLEN---------KMIAMKENSGKKLIQ 470
+ + + N + A+ E G ++IQ
Sbjct: 596 RSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQ 632
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 65/339 (19%)
Query: 94 WQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLK---PSVD 150
W+ A +F + ++ Q F+ ++ CK Q L FE++ +K P+V
Sbjct: 355 WEAARNLFDEMTNRRIEQ---DVFSYNTLLDAICKGG-QMDLAFEILAQMPVKRIMPNVV 410
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAE 210
Y+ ++ + ++G DEA + +M+ + D +Y+ L+ TK R + IL E
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEALDILRE 469
Query: 211 MSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSG 270
M+ +GI+ VTYN ++ GYGK K++E++ F+ M P++ T +++I Y G
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLIDGYSKGG 528
Query: 271 NIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY- 329
++ + + EF G++AD+ + L + + G+ S++D M K P VVTY
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Query: 330 ---------------------------------------NIVIETFGKAG---------- 340
N VI+ FG+
Sbjct: 589 SIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKD 648
Query: 341 ------HIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSK 373
+ + E F+KM +KPN +T+ ++++A S+
Sbjct: 649 CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSR 687
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 156/316 (49%), Gaps = 2/316 (0%)
Query: 144 GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDL 203
G+ P + Y L+SAY GL++EAF +N M P VYTY+ +I K +++
Sbjct: 265 GVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG-KGFSPGVYTYNTVINGLCKHGKYER 323
Query: 204 IEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMI 263
+++ AEM G+ + TY +++ K E E FS M S PD+ +SM+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMM 382
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
S + SGN++K ++N G+ D IL + Y R GM ++ + M ++
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 324 PTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
VVTYN ++ K + + ++ F +M R + P+S T L+ + K G + +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 384 LRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNA 443
++++ + LD +N ++ +G+ GD++ E++ M + +P I+++ ++ A +
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCS 562
Query: 444 LGMTEAAQNLENKMIA 459
G A + ++MI+
Sbjct: 563 KGHLAEAFRVWDEMIS 578
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 150/310 (48%), Gaps = 4/310 (1%)
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSV-SDCKPDVYTYSILIKSCTKFHRFDLIEKIL 208
D + L+ +SG+ +N + S S+C + + +LI++ + + +
Sbjct: 131 DAQSCLLRMIRRSGV--SRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF 188
Query: 209 AEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGN 268
+ G S N +I + E + + SG +++TLN M++A
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG-VGINVYTLNIMVNALCK 247
Query: 269 SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVT 328
G +EK+ + ++ GV DI T N L +Y G+ ++ +M+ M + F P V T
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYT 307
Query: 329 YNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
YN VI K G E+ +E F +M G+ P+S TY SL+ K G +++ + + +
Sbjct: 308 YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMR 367
Query: 389 NSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTE 448
+ DV+ D F+ ++S + ++G+++K F ++KE +PDN+ + +IQ Y GM
Sbjct: 368 SRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMIS 427
Query: 449 AAQNLENKMI 458
A NL N+M+
Sbjct: 428 VAMNLRNEML 437
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 162/354 (45%), Gaps = 6/354 (1%)
Query: 122 VMLGKCKQPE--QASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS 179
+++ CK+ + + +F M S + P + +++++S + +SG LD+A N +K +
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE-A 404
Query: 180 DCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEM 239
PD Y+ILI+ + + + EM G VTYNTI+ G K K E
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 240 ESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTK 299
+ F+ M E PD +TL +I + GN++ + + + ++ D+ T N L
Sbjct: 465 DKLFNEMTERA-LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 300 SYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKP 359
+G+ G D + + M + PT ++Y+I++ GH+ + + +M + +KP
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 360 NSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELF 419
+ S++ Y ++G +S L ++ + + D +N +I + + ++ K L
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 420 LTMKERH--CVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSGKKLIQC 471
M+E VPD T+ +++ + + A+ + KMI N + C
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTC 697
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 154/332 (46%), Gaps = 2/332 (0%)
Query: 126 KCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDV 185
+ ++ +A F ++ S G S+D AL+ + + G ++ A+ ++ S S +V
Sbjct: 177 QARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-SRSGVGINV 235
Query: 186 YTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSA 245
YT +I++ + K + + + L+++ G+ VTYNT+I Y EE +A
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 246 MVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG 305
M G P ++T N++I+ G E+ ++ + E G+ D T L + G
Sbjct: 296 M-PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 306 MYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYC 365
+ V M+ R P +V ++ ++ F ++G+++K YF +K G+ P+++ Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 366 SLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKER 425
L+ Y + G+I ++ ++ +D +N I+ + + + +LF M ER
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 426 HCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
PD+ T +I + LG + A L KM
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 150/351 (42%), Gaps = 37/351 (10%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM- 175
F+ +M + + ++A + F + GL P +YT L+ Y + G++ A + N+M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 176 --KSVSD-----------CK--------------------PDVYTYSILIKSCTKFHRFD 202
D CK PD YT +ILI K
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 203 LIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSM 262
++ +M I VTYNT++DG+GK + + ++ MV S P + + +
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV-SKEILPTPISYSIL 556
Query: 263 ISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFF 322
++A + G++ + + ++E +K + N + K Y R+G S ++ M F
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 323 FPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR--GMKPNSITYCSLVSAYSKAGLIMKV 380
P ++YN +I F + ++ K KKM+ G+ P+ TY S++ + + + +
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDN 431
+ +LR++ V D + C+I+ + ++ + + M +R PD+
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 9/244 (3%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K Q A+++F +++++ + T+ L+ GK + A ++ M+S
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKR-IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P+ Y+ LV+A G L EAF ++M S + KP V + +IK +
Sbjct: 546 ILPTPISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMV----ESGGCHPDIFTLN 260
E L +M G ++YNT+I G+ + E M +F + E GG PD+FT N
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVRE---ENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
S++ + +++ E + GV D T + + + + D M +R
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Query: 321 FFFP 324
F P
Sbjct: 722 GFSP 725
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 55/136 (40%), Gaps = 3/136 (2%)
Query: 125 GKCK--QPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKS-VSDC 181
G C+ E M+S+G P Y L+ + + + +AF + M+
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 182 KPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMES 241
PDV+TY+ ++ + ++ E +L +M G+ TY +I+G+ E
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFR 713
Query: 242 SFSAMVESGGCHPDIF 257
M++ G D F
Sbjct: 714 IHDEMLQRGFSPDDKF 729
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 5/351 (1%)
Query: 109 WYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEA 168
W A + LG+ K+ LL E+ G P V Y+ +V+ Y + G LD+
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMEL---KGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 169 FSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIID 228
+ I MK KP+ Y Y +I + + E+ +EM GI V Y T+ID
Sbjct: 301 WKLIEVMKR-KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 229 GYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVK 288
G+ K F M S PD+ T ++IS + G++ + K ++E G++
Sbjct: 360 GFCKRGDIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 289 ADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEY 348
D T L Y +AG V + M + P VVTY +I+ K G ++ E
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 349 FKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQ 408
+M G++PN TY S+V+ K+G I + ++ + E + + DT + ++ AY +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 409 AGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
+G+++K E+ M + P +TF ++ + GM E + L N M+A
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA 589
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 42/358 (11%)
Query: 120 LMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS 179
L+ + K + E+A F M+ G+ P VYT L+ + + G + A +M S
Sbjct: 325 LLCRICKLAEAEEA---FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHS-R 380
Query: 180 DCKPDVYTYSILIKSCTKFHRFDLIE--KILAEMSYLGIECSAVTYNTIIDGYGKAKKFE 237
D PDV TY+ +I + D++E K+ EM G+E +VT+ +I+GY KA +
Sbjct: 381 DITPDVLTYTAIISGFCQIG--DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 238 EMESSFSAMVESG----------------------------------GCHPDIFTLNSMI 263
+ + M+++G G P+IFT NS++
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
+ SGNIE+ K EF G+ AD T L +Y ++G DK + ++ M +
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 324 PTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
PT+VT+N+++ F G +E E+ M +G+ PN+ T+ SLV Y + +I
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 384 LRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
+ + + V D + ++ + +A ++++ LF MK + T++ +I+ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 150/319 (47%), Gaps = 2/319 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+T ++ + +A LF M GL+P +T L++ Y ++G + +AF N M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ C P+V TY+ LI K D ++L EM +G++ + TYN+I++G K+
Sbjct: 448 IQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
EE E+ G + D T +++ AY SG ++K ++ E G++ I T N
Sbjct: 507 IEE-AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFN 565
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+L + GM + ++++M + P T+N +++ + +++ +K M R
Sbjct: 566 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+ P+ TY +LV + KA + + + ++++ + ++ +I + + +
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 416 GELFLTMKERHCVPDNITF 434
E+F M+ D F
Sbjct: 686 REVFDQMRREGLAADKEIF 704
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 2/285 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TFT+L+ K + A + M+ G P+V YT L+ + G LD A +++M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ +P+++TY+ ++ K + K++ E G+ VTY T++D Y K+ +
Sbjct: 483 WKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
++ + M+ G P I T N +++ + G +E EK N G+ + T N
Sbjct: 542 MDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L K Y ++ M R P TY +++ KA ++++ F++MK +
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGK 660
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFN 400
G + TY L+ + K ++ + Q+ + D F+
Sbjct: 661 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 87/174 (50%), Gaps = 1/174 (0%)
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ EF +GV ++ + NI+ + G + ++ M+ + + P V++Y+ V+ + +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
G ++K+ + + MK +G+KPNS Y S++ + + + + ++ ++ DT
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALG-MTEAAQ 451
+ +I + + GD+ + F M R PD +T+ +I + +G M EA +
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 133 ASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK----SVSDCKPDVYTY 188
A+ +++ M S G+ P Y LV + ++ + EA+ +MK SVS V TY
Sbjct: 615 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVS-----VSTY 669
Query: 189 SILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVE 248
S+LIK K +F ++ +M G+ ++ D K K+ + + ++E
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Query: 249 S 249
+
Sbjct: 730 N 730
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 172/361 (47%), Gaps = 2/361 (0%)
Query: 97 ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALV 156
A+++F ++ Q + +T L+ + K + E+A LFE M G P+V YT L+
Sbjct: 252 AIRLFDEMKDN-CMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
G++G +DEA+ DM PDV + L+ K R + + + +EM
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLR-DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKME 276
+ V+YNT+I ++K SS+ +++ P FT + +I Y + +EK
Sbjct: 370 TPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKAL 429
Query: 277 KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETF 336
E + G L + G+A Y+ + +++ F + Y ++I+ F
Sbjct: 430 LLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHF 489
Query: 337 GKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDT 396
GK G + + + F +MK++G P+ Y +L+S KAG+I + +S+LR++E + D
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549
Query: 397 PFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENK 456
N I++ + + G + E+F T+K PD +T+ T++ + GM E A + +
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 457 M 457
M
Sbjct: 610 M 610
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 156/343 (45%), Gaps = 2/343 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
++L+ LG+ K +A +F KP+ Y +++ Q G ++ +M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ DC PD TYS LI S K R D ++ EM ++ + Y T++ Y K K
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGK 283
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
E+ F M + GC P ++T +I G +G +++ +Y + G+ D+ LN
Sbjct: 284 VEKALDLFEEM-KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIET-FGKAGHIEKMEEYFKKMKH 354
L G+ G +++ +V M PTVV+YN VI+ F H+ ++ +F KMK
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
+ P+ TY L+ Y K + K +L +++ + +I+A G+A E
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
ELF +KE + +A MI+ + G A +L N+M
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEM 505
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 165/366 (45%), Gaps = 50/366 (13%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQ----TFTKLMVMLGKCKQPEQASLLFEVMLSDGL 145
K K + AL +F ++ +A C T+T+L+ LGK + ++A ++ ML DGL
Sbjct: 280 KVGKVEKALDLF-----EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL 334
Query: 146 KPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDV-------------------- 185
P V L++ G+ G ++E + ++M + C P V
Sbjct: 335 TPDVVFLNNLMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEV 393
Query: 186 ----------------YTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
+TYSILI K +R + +L EM G Y ++I+
Sbjct: 394 SSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA 453
Query: 230 YGKAKKFEEMESSFSAMVES-GGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVK 288
GKAK++E F + E+ G ++ + MI +G G + + +NE G
Sbjct: 454 LGKAKRYEAANELFKELKENFGNVSSRVYAV--MIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 289 ADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEY 348
D+ N L +AGM ++ S++ M++ + ++NI++ F + G + E
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 349 FKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQ 408
F+ +KH G+KP+ +TY +L+ ++ AG+ + ++R++++ D ++ I+ A G
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Query: 409 AGDVEK 414
D EK
Sbjct: 632 V-DHEK 636
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 7/261 (2%)
Query: 184 DVYTYSILIKSCTKFHRFDLIEKILAEM---SYLGIECSAVTYNTIIDGYGKAKKFEEME 240
D TY LI+ + + + + + E+ +Y+ + S + ++ G+AK +
Sbjct: 125 DCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSV--SPAVLSELVKALGRAKMVSKAL 182
Query: 241 SSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEF-NLMGVKADIQTLNILTK 299
S F + C P T NS+I G EK+ + Y E N D T + L
Sbjct: 183 SVF-YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 300 SYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKP 359
SY + G D + D M+ PT Y ++ + K G +EK + F++MK G P
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP 301
Query: 360 NSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELF 419
TY L+ KAG + + + + + D F N +++ G+ G VE++ +F
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 420 LTMKERHCVPDNITFATMIQA 440
M C P +++ T+I+A
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKA 382
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 293 TLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKM 352
L+ L K+ GRA M K SV + R PT TYN VI + G EK+ E + +M
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 353 KHRG-MKPNSITYCSLVSAYSKAGLIMKVDSILR---QVENSDVILDTPFFNCIISAYGQ 408
+ G P++ITY +L+S+Y K G + DS +R +++++ + + ++ Y +
Sbjct: 224 CNEGDCFPDTITYSALISSYEKLG---RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 409 AGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
G VEK +LF MK C P T+ +I+ G + A M+
Sbjct: 281 VGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML 330
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 35/188 (18%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
K K+++ A ++F L++ + + + ++ GKC + +A LF M + G P V
Sbjct: 456 KAKRYEAANELFKELKEN-FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDV 514
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSV------------------------------- 178
Y AL+S ++G+++EA S + M+
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 179 ---SDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
S KPD TY+ L+ F+ +++ EM G E A+TY++I+D G
Sbjct: 575 IKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Query: 236 FEEMESSF 243
++ SSF
Sbjct: 635 EKDDVSSF 642
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 327 VTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQ 386
V N+ I+ F AG K R + + TY +L+ +A L ++ +++
Sbjct: 104 VEINVKIQFFKWAG------------KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQE 151
Query: 387 V-ENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALG 445
V N+ V + + ++ A G+A V K +F K R C P + T+ ++I G
Sbjct: 152 VVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEG 211
Query: 446 MTEAAQNLENKM 457
E + +M
Sbjct: 212 QHEKVHEVYTEM 223
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 135 bits (341), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 176/379 (46%), Gaps = 16/379 (4%)
Query: 80 PVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQP--EQASLLF 137
PVL + K + LA++ LLR+ + + +++ G CK + A LF
Sbjct: 233 PVLNVM---CKSGQTALAME---LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 138 EVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM--KSVSDCKPDVYTYSILIKSC 195
M G K + Y L+ + +G D+ + DM + +S P+V T+S+LI S
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS---PNVVTFSVLIDSF 343
Query: 196 TKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPD 255
K + +++L EM GI + +TYN++IDG+ K + EE M+ S GC PD
Sbjct: 344 VKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMI-SKGCDPD 402
Query: 256 IFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMD 315
I T N +I+ Y + I+ + + E +L GV A+ T N L + + ++G + + +
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 316 FMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAG 375
M R P +V+Y I+++ G +EK E F K++ M+ + Y ++ A
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 376 LIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
+ + + V LD +N +IS + + K LF M E PD +T+
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYN 582
Query: 436 TMIQAYNALGMTEAAQNLE 454
+I+A+ LG +A E
Sbjct: 583 ILIRAH--LGDDDATTAAE 599
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 155/332 (46%), Gaps = 3/332 (0%)
Query: 126 KCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDV 185
+C+ E L+ + M+ G KP++ LV+ +G + +A I+ M + +P+
Sbjct: 171 ECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE-TGFQPNE 228
Query: 186 YTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSA 245
TY ++ K + L ++L +M I+ AV Y+ IIDG K + + F+
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 246 MVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG 305
M E G DI T N++I + N+G + K + + ++ T ++L S+ + G
Sbjct: 289 M-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 306 MYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYC 365
+ ++ M +R P +TYN +I+ F K +E+ + M +G P+ +T+
Sbjct: 348 KLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Query: 366 SLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKER 425
L++ Y KA I + R++ VI +T +N ++ + Q+G +E +LF M R
Sbjct: 408 ILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR 467
Query: 426 HCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
PD +++ ++ G E A + K+
Sbjct: 468 RVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 10/303 (3%)
Query: 162 SGLL----DEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIE 217
SGL+ D+A DM S P V ++ L + K +++L+ + +M GI
Sbjct: 62 SGLVGIKADDAVDLFRDMIQ-SRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIA 120
Query: 218 CSAVTYNTIIDGYGKAKKFEEMESSFSAM--VESGGCHPDIFTLNSMISAYGNSGNIEKM 275
S T + +I+ + + +K + +FS M + G PD N++++ + +
Sbjct: 121 HSIYTLSIMINCFCRCRK---LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEA 177
Query: 276 EKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIET 335
+ + MG K + TLN L G ++D M + F P VTY V+
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNV 237
Query: 336 FGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILD 395
K+G E +KM+ R +K +++ Y ++ K G + ++ ++E D
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD 297
Query: 396 TPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLEN 455
+N +I + AG + +L M +R P+ +TF+ +I ++ G A L
Sbjct: 298 IITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLK 357
Query: 456 KMI 458
+M+
Sbjct: 358 EMM 360
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 1/243 (0%)
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
+ + +N + K K++E + + +ES G I+TL+ MI+ + +
Sbjct: 87 TVIDFNRLFSAIAKTKQYE-LVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ +G + D N L + ++D M + PT++T N ++
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
G + +M G +PN +TY +++ K+G +LR++E ++ LD
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
++ II + G ++ LF M+ + D IT+ T+I + G + L MI
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 459 AMK 461
K
Sbjct: 326 KRK 328
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 80/197 (40%), Gaps = 4/197 (2%)
Query: 103 LLRQQQWYQARCQTFTKLMVMLGKCK--QPEQASLLFEVMLSDGLKPSVDVYTALVSAYG 160
L R+ T T ++ G C+ + E A LF+ M+S ++P + Y L+
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 161 QSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSA 220
+G L++A ++ S + D+ Y I+I + D + + G++ A
Sbjct: 485 DNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 221 VTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYN 280
YN +I + + + F M E G PD T N +I A+ + +
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGH-APDELTYNILIRAHLGDDDATTAAELIE 602
Query: 281 EFNLMGVKADIQTLNIL 297
E G AD+ T+ ++
Sbjct: 603 EMKSSGFPADVSTVKMV 619
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 135 bits (340), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 162/326 (49%), Gaps = 6/326 (1%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ L+ L + AS L M+ + P+V ++AL+ A+ + G L EA ++M
Sbjct: 292 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIEC--SAVTYNTIIDGYGKA 233
S PD++TYS LI R D + + M + +C + VTYNT+I G+ KA
Sbjct: 352 IKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTLIKGFCKA 408
Query: 234 KKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQT 293
K+ EE F M + G + T N++I +G+ + +K + + GV DI T
Sbjct: 409 KRVEEGMELFREMSQRG-LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 294 LNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMK 353
+IL + G +K V +++QK P + TYNI+IE KAG +E + F +
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 354 HRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVE 413
+G+KPN I Y +++S + + GL + D++ R+++ + ++ +N +I A + GD
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 414 KMGELFLTMKERHCVPDNITFATMIQ 439
EL M+ V D T + +I
Sbjct: 588 ASAELIKEMRSCGFVGDASTISMVIN 613
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 162/344 (47%), Gaps = 2/344 (0%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
YQ TF L+ L + +A L + M++ G +P + Y +V+ + G +D A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
S + M+ + DV Y+ +I + + + + EM GI + VTYN++I
Sbjct: 241 SLLKKMEK-GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
++ + S M+E +P++ T +++I A+ G + + EK Y+E +
Sbjct: 300 LCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
DI T + L + D+ + + + M + FP VVTYN +I+ F KA +E+ E F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQA 409
++M RG+ N++TY +L+ +AG I +++ + V D ++ ++ +
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G +EK +F +++ PD T+ MI+ G E +L
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 192/438 (43%), Gaps = 49/438 (11%)
Query: 59 FAIKNIEKKVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFT 118
F+++ + +S Y+ + VL L K A+ +FG + Q + + + F
Sbjct: 33 FSLRGVYFSAASYDYREKLSRNVLLDL-------KLDDAVDLFGEMVQSRPLPSIVE-FN 84
Query: 119 KLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYT--ALVSAYGQSGLLDEAFSTINDMK 176
KL+ + K + + L E M L+ S D+Y+ L++ + + L A + + M
Sbjct: 85 KLLSAIAKMNKFDLVISLGERM--QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 177 SVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKF 236
+ +PD+ T S L+ R ++ +M + + + VT+NT+I G K
Sbjct: 143 KLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKA 201
Query: 237 EEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIE-------KMEK------------ 277
E + MV + GC PD+FT ++++ G+I+ KMEK
Sbjct: 202 SEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTT 260
Query: 278 ----------------WYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRF 321
+ E + G++ ++ T N L + G + ++ M +R
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 322 FFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVD 381
P VVT++ +I+ F K G + + E+ + +M R + P+ TY SL++ + + +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 382 SILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
+ + + D + +N +I + +A VE+ ELF M +R V + +T+ T+IQ
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 442 NALGMTEAAQNLENKMIA 459
G + AQ + KM++
Sbjct: 441 FQAGDCDMAQKIFKKMVS 458
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 168/354 (47%), Gaps = 2/354 (0%)
Query: 108 QWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDE 167
+ ++ QT++ LMV LGK + + L + M + GLKP+V +T + G++G ++E
Sbjct: 217 EGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINE 276
Query: 168 AFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTII 227
A+ + M C PDV TY++LI + + D +++ +M + VTY T++
Sbjct: 277 AYEILKRMDD-EGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 228 DGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGV 287
D + + + ++ +S M E G PD+ T ++ A +GN + + G+
Sbjct: 336 DRFSDNRDLDSVKQFWSEM-EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGI 394
Query: 288 KADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEE 347
++ T N L R D + M+ PT TY + I+ +GK+G E
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 348 YFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYG 407
F+KMK +G+ PN + + + + +KAG + I +++ ++ D+ +N ++ Y
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 408 QAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMK 461
+ G++++ +L M E C PD I ++I + A + +M MK
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 181/372 (48%), Gaps = 10/372 (2%)
Query: 88 AIKQKKWQL-ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLK 146
+KQ + L ++ FG + Y L+ +L K + +A ++ M+ +G +
Sbjct: 168 GLKQAPYALRKMREFGFVLNAYSYNG-------LIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 147 PSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEK 206
PS+ Y++L+ G+ +D + +M+++ KP+VYT++I I+ + + + +
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG-LKPNVYTFTICIRVLGRAGKINEAYE 279
Query: 207 ILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAY 266
IL M G VTY +ID A+K + + F M ++G PD T +++ +
Sbjct: 280 ILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRF 338
Query: 267 GNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTV 326
++ +++ ++++++E G D+ T IL + +AG + + +D M+ + P +
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 327 VTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQ 386
TYN +I + ++ E F M+ G+KP + TY + Y K+G + +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 387 VENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGM 446
++ + + N + + +AG + ++F +K+ VPD++T+ M++ Y+ +G
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 447 TEAAQNLENKMI 458
+ A L ++M+
Sbjct: 519 IDEAIKLLSEMM 530
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 3/354 (0%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D +K A ++F ++ + R T+ L+ + + + M DG
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRV-TYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
P V +T LV A ++G EAF T++ M+ P+++TY+ LI + HR D
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
++ M LG++ +A TY ID YGK+ +F M ++ G P+I N+ +
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLY 476
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ +G + ++ + +G+ D T N++ K Y + G D+ ++ M + P
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
V+ N +I T KA +++ + F +MK +KP +TY +L++ K G I + +
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMI 438
+ +T FN + + +V ++ M + CVPD T+ T+I
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 4/349 (1%)
Query: 88 AIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKP 147
+ K A +F + Q + T+ L+ L + E A +F + S G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 148 SVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRF-DLIEK 206
V Y L+ AYG+SG +DE F +M S +C+ + T++I+I K D ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 207 ILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAY 266
MS +A TY +IDG K+ + E + F M++ GC P+ N +I+ +
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY-GCRPNCAIYNILINGF 936
Query: 267 GNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTV 326
G +G + + GV+ D++T ++L G D+ +++ P V
Sbjct: 937 GKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 327 VTYNIVIETFGKAGHIEKMEEYFKKMK-HRGMKPNSITYCSLVSAYSKAGLIMKVDSILR 385
V YN++I GK+ +E+ F +MK RG+ P+ TY SL+ AG++ + I
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 386 QVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITF 434
+++ + + + FN +I Y +G E ++ TM P+ T+
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 155/328 (47%), Gaps = 3/328 (0%)
Query: 133 ASLLFEVMLSD-GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSIL 191
A LFE D G++P + Y L+ ++ +++ A +KS + C PDV TY+ L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS-TGCIPDVATYNFL 826
Query: 192 IKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGG 251
+ + K + D + ++ EMS E + +T+N +I G KA ++ + ++
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 252 CHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMR 311
P T +I SG + + ++ + G + + NIL +G+AG D
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 312 SVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAY 371
++ M K P + TY+++++ G +++ YFK++K G+ P+ + Y +++
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 372 SKAGLIMKVDSILRQVENSDVIL-DTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPD 430
K+ + + + +++ S I D +N +I G AG VE+ G+++ ++ P+
Sbjct: 1007 GKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 431 NITFATMIQAYNALGMTEAAQNLENKMI 458
TF +I+ Y+ G E A + M+
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMV 1094
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 166/413 (40%), Gaps = 74/413 (17%)
Query: 124 LGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKP 183
L K + +A +F + GL P Y ++ Y + G +DEA +++M + C+P
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME-NGCEP 536
Query: 184 DVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSF 243
DV + LI + K R D K+ M + ++ + VTYNT++ G GK K +E F
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 244 SAMVESG----------------------------------GCHPDIFTLNSMISAYGNS 269
MV+ G GC PD+FT N++I +
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMY-DKMRSVMDFM----------- 317
G +++ ++++ + V D TL L +A + D + + +F+
Sbjct: 657 GQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 318 ---------------QKRFFFPTVVTYNI----------VIETFGKAGHIEKMEEYFKKM 352
F +V I +I K ++ F+K
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 353 -KHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGD 411
K G++P TY L+ +A +I + QV+++ I D +N ++ AYG++G
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 412 VEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENS 464
++++ EL+ M C + IT +I G + A +L +++ ++ S
Sbjct: 836 IDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFS 888
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 137/327 (41%), Gaps = 2/327 (0%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
E+ + +F++M +K + Y + + G L +A + M+ + Y+Y+
Sbjct: 135 EEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVL-NAYSYNG 193
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
LI K ++ M G S TY++++ G GK + + + M E+
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETL 252
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
G P+++T I G +G I + + + G D+ T +L + A D
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
+ V + M+ P VTY +++ F ++ +++++ +M+ G P+ +T+ LV A
Sbjct: 313 KEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPD 430
KAG + L + + ++ + +N +I + ++ ELF M+ P
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 431 NITFATMIQAYNALGMTEAAQNLENKM 457
T+ I Y G + +A KM
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKM 459
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 3/227 (1%)
Query: 234 KKFEEMESSFSAMVESGGCHPDIFT---LNSMISAYGNSGNIEKMEKWYNEFNLMGVKAD 290
K F + +SSFS G + T N M+ A G +E+M ++ +K D
Sbjct: 93 KSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRD 152
Query: 291 IQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFK 350
T + KS G + + M++ F +YN +I K+ + E ++
Sbjct: 153 TNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYR 212
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+M G +P+ TY SL+ K I V +L+++E + + F I G+AG
Sbjct: 213 RMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 411 DVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
+ + E+ M + C PD +T+ +I A + A+ + KM
Sbjct: 273 KINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
K + + AL +F ++ + T+ L++ LG E+A ++ + GL+P+V
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNV 1067
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSIL 191
+ AL+ Y SG + A++ M + P+ TY L
Sbjct: 1068 FTFNALIRGYSLSGKPEHAYAVYQTMVT-GGFSPNTGTYEQL 1108
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 164/347 (47%), Gaps = 2/347 (0%)
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
+ Y+ TFT L+ L + +A L + M+ G +P++ Y +V+ + G D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 167 EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTI 226
A + +N M++ + + DV ++ +I S K+ D + EM GI + VTY+++
Sbjct: 243 LALNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 227 IDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
I ++ + S M+E +P++ T N++I A+ G + EK Y++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ DI T N L + DK + + +FM + FP VVTYN +I+ F K+ +E
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
E F++M HRG+ +++TY +L+ G + +Q+ + V D ++ ++
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G +EK E+F M++ D + TMI+ G + +L
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 527
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 3/351 (0%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K + AL +F + + + + T++ L+ L + AS L M+
Sbjct: 267 IDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P++ + AL+ A+ + G EA +DM S PD++TY+ L+ R D
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMHDRLDKA 384
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
+++ M VTYNT+I G+ K+K+ E+ F M G D T ++I
Sbjct: 385 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQ 443
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ G+ + +K + + GV DI T +IL G +K V D+MQK
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
+ Y +IE KAG ++ + F + +G+KPN +TY +++S L+ + ++L
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
++++ + ++ +N +I A+ + GD EL M+ V D T
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 614
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 160/370 (43%), Gaps = 38/370 (10%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ + LAL + G + + Y+ T + L+ K+ A L + M+ G +P
Sbjct: 132 RRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+T L+ EA + ++ M C+P++ TY +++ K DL +L
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDLALNLLN 249
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
+M IE V +NTIID K + ++ + F M E+ G P++ T +S+IS +
Sbjct: 250 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSY 308
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
G +W + L+ D ++K+ P +VT+
Sbjct: 309 G------RWSDASQLLS----------------------------DMIEKKIN-PNLVTF 333
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +I+ F K G + E+ + M R + P+ TY SLV+ + + K + + +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
D D +N +I + ++ VE ELF M R V D +T+ T+IQ G +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 450 AQNLENKMIA 459
AQ + +M++
Sbjct: 454 AQKVFKQMVS 463
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 36/294 (12%)
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P + ++ L+ + K +FD++ + +M L I TYN +I+ + + + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
M++ G P I TL+S+++ Y + I ++ MG + D T L
Sbjct: 143 LGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAG---------------------- 340
+ +++D M +R P +VTY +V+ K G
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 341 -------------HIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQV 387
H++ FK+M+ +G++PN +TY SL+S G +L +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 388 ENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
+ + FN +I A+ + G + +L+ M +R PD T+ +++ +
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
S V +N ++ K KKF+ + S M H ++T N +I+ + I
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILINCFCRRSQISLALAL 142
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ +G + I TL+ L Y +++D M + + P +T+ +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+ +M RG +PN +TY +V+ K G ++L ++E + + D
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
FN II + + V+ LF M+ + P+ +T++++I + G A L + MI
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 459 AMKEN 463
K N
Sbjct: 323 EKKIN 327
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 163/346 (47%), Gaps = 5/346 (1%)
Query: 117 FTKLMVMLGKCKQPEQASL--LFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
FT +++G C++ + S +F M G + + YT L+ + +DEA
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
MK +C P V TY++LIKS R ++ EM GI+ + TY +ID
Sbjct: 314 MKD-DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
KFE+ M+E G P++ T N++I+ Y G IE + + +T
Sbjct: 373 KFEKARELLGQMLEKG-LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTY 431
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N L K Y ++ ++ M V++ M +R P VVTYN +I+ ++G+ + M
Sbjct: 432 NELIKGYCKSNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
RG+ P+ TY S++ + K+ + + + +E V + + +I Y +AG V++
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
+ M ++C+P+++TF +I A G + A LE KM+ +
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 3/314 (0%)
Query: 140 MLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFH 199
ML D + P++ Y +V+ Y + G ++EA ++ + + PD +TY+ LI +
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE-AGLDPDFFTYTSLIMGYCQRK 267
Query: 200 RFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTL 259
D K+ EM G + V Y +I G A++ +E F M + C P + T
Sbjct: 268 DLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTY 326
Query: 260 NSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQK 319
+I + S + E G+K +I T +L S ++K R ++ M +
Sbjct: 327 TVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLE 386
Query: 320 RFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMK 379
+ P V+TYN +I + K G IE + + M+ R + PN+ TY L+ Y K+ + K
Sbjct: 387 KGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHK 445
Query: 380 VDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQ 439
+L ++ V+ D +N +I ++G+ + L M +R VPD T+ +MI
Sbjct: 446 AMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID 505
Query: 440 AYNALGMTEAAQNL 453
+ E A +L
Sbjct: 506 SLCKSKRVEEACDL 519
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 157/343 (45%), Gaps = 3/343 (0%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
T+T L+ L + E+A L ML GL P+V Y AL++ Y + G++++A +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
M+S P+ TY+ LIK K + + +L +M + VTYN++IDG ++
Sbjct: 419 MES-RKLSPNTRTYNELIKGYCKSNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
F+ S M + G PD +T SMI + S +E+ ++ GV ++
Sbjct: 477 NFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
L Y +AG D+ +++ M + P +T+N +I G +++ +KM
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 595
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
G++P T L+ K G S +Q+ +S D + I Y + G +
Sbjct: 596 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 655
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
++ M+E PD T++++I+ Y LG T A ++ +M
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 155/346 (44%), Gaps = 7/346 (2%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ K++ K E+A+ ++ GL P YT+L+ Y Q LD AF N+M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIEC--SAVTYNTIIDGYGKA 233
+ C+ + Y+ LI R D + +M EC + TY +I +
Sbjct: 280 -PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMK--DDECFPTVRTYTVLIKSLCGS 336
Query: 234 KKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQT 293
++ E + M E+G P+I T +I + + EK + + G+ ++ T
Sbjct: 337 ERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 294 LNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMK 353
N L Y + GM + V++ M+ R P TYN +I+ + K+ ++ K KM
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKML 454
Query: 354 HRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVE 413
R + P+ +TY SL+ ++G +L + + ++ D + +I + ++ VE
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 414 KMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
+ +LF +++++ P+ + + +I Y G + A + KM++
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 560
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 147/345 (42%), Gaps = 32/345 (9%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQ-----QWYQARCQTFTKLMVMLGKCKQPEQASLLFEV 139
+D + + A ++ L+ + QW T+T ++ L K K+ E+A LF+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQW------TYTSMIDSLCKSKRVEEACDLFDS 522
Query: 140 MLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFH 199
+ G+ P+V +YTAL+ Y ++G +DEA + M S +C P+ T++ LI
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS-KNCLPNSLTFNALIHGLCADG 581
Query: 200 RFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTL 259
+ + +M +G++ + T +I K F+ S F M+ SG PD T
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTY 640
Query: 260 NSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQK 319
+ I Y G + E + GV D+ T + L K YG G + V+ M+
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 320 RFFFPTVVTYNIVIE-----TFGKAGHIEK--------ME-----EYFKKMKHRGMKPNS 361
P+ T+ +I+ +GK E ME E +KM + PN+
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNA 760
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF-FNCIISA 405
+Y L+ + G + + + ++ ++ I + FN ++S
Sbjct: 761 KSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 143/351 (40%), Gaps = 48/351 (13%)
Query: 146 KPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIE 205
K SV Y +L++ +G + F M D D L + K RF+L
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKY 179
Query: 206 KILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISA 265
K++ I C YNT+++ + +EM+ + M+E C P+I+T N M++
Sbjct: 180 KLI-------IGC----YNTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNG 227
Query: 266 YGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYD----------------- 308
Y GN+E+ ++ ++ G+ D T L Y + D
Sbjct: 228 YCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRN 287
Query: 309 ---------------KMRSVMDF---MQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFK 350
++ MD M+ FPTV TY ++I++ + + K
Sbjct: 288 EVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVK 347
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+M+ G+KPN TY L+ + K +L Q+ ++ + +N +I+ Y + G
Sbjct: 348 EMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 411 DVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMK 461
+E ++ M+ R P+ T+ +I+ Y + +A L NKM+ K
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL-NKMLERK 457
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 104/249 (41%), Gaps = 19/249 (7%)
Query: 140 MLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIK------ 193
M +G+ P + Y++L+ YG G + AF + M+ + C+P +T+ LIK
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD-TGCEPSQHTFLSLIKHLLEMK 721
Query: 194 ------------SCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMES 241
+ + FD + ++L +M + +A +Y +I G + E
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 242 SFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSY 301
F M + G P N+++S + K ++ +G +++ +L
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 302 GRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
+ G ++ SV + + ++ + + I+I+ GK G +E E F M+ G K +S
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 362 ITYCSLVSA 370
TY L+
Sbjct: 902 QTYSLLIEG 910
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 164/334 (49%), Gaps = 2/334 (0%)
Query: 124 LGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKP 183
L K K + A LF+ M + G++P+V Y++L+S G +A ++DM P
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-RKINP 324
Query: 184 DVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSF 243
DV+T+S LI + K + EK+ EM I+ S VTY+++I+G+ + +E + F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 244 SAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGR 303
MV S C PD+ T N++I + +E+ + + E + G+ + T NIL + +
Sbjct: 385 EFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 304 AGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSIT 363
AG D + + M P ++TYN +++ K G +EK F+ ++ M+P T
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 364 YCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMK 423
Y ++ KAG + + + V D +N +IS + + G E+ LF MK
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Query: 424 ERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
E +P++ + T+I+A G EA+ L +M
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 160/344 (46%), Gaps = 2/344 (0%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
YQ TF L+ L + +A L + M++ G +P + Y +V+ + G D AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
+ +N M+ +P V Y+ +I K+ D + EM GI + VTY+++I
Sbjct: 242 NLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
++ + S M+E +PD+FT +++I A+ G + + EK Y+E +
Sbjct: 301 LCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
I T + L + D+ + + +FM + FP VVTYN +I+ F K +E+ E F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQA 409
++M RG+ N++TY L+ +AG I +++ + V + +N ++ +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G +EK +F ++ P T+ MI+ G E +L
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 163/370 (44%), Gaps = 38/370 (10%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ + LAL + G + + Y+ T + L+ K+ +A L + M G +P+
Sbjct: 128 RRSQLPLALAVLGKM-MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+ L+ EA + I+ M + C+PD+ TY +++ K DL +L
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVA-KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLN 245
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
+M +E + YNTIIDG K K ++ + F M E+ G P++ T +S+IS N
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNY 304
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
G +W D R + D ++++ P V T+
Sbjct: 305 G------RWS----------------------------DASRLLSDMIERKIN-PDVFTF 329
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
+ +I+ F K G + + E+ + +M R + P+ +TY SL++ + + + + + +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
D +N +I + + VE+ E+F M +R V + +T+ +IQ G +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 450 AQNLENKMIA 459
AQ + +M++
Sbjct: 450 AQEIFKEMVS 459
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 145/311 (46%), Gaps = 2/311 (0%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
+ A LF M+ PS+ ++ L+SA + D S M+++ + YTYSI
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-IPHNHYTYSI 121
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
LI + + L +L +M LG E + VT +++++GY +K+ E + M +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT- 180
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
G P+ T N++I + + G + D+ T ++ + G D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
++++ M++ P V+ YN +I+ K H++ FK+M+ +G++PN +TY SL+S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPD 430
G +L + + D F+ +I A+ + G + + +L+ M +R P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 431 NITFATMIQAY 441
+T++++I +
Sbjct: 361 IVTYSSLINGF 371
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 35/282 (12%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TF+ L+ K + +A L++ M+ + PS+ Y++L++ + LDEA M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
S C PDV TY+ LIK K+ R + ++ EMS G+ + VTYN +I G +A
Sbjct: 388 VS-KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 236 FEEMESSFSAMVESG----------------------------------GCHPDIFTLNS 261
+ + F MV G P I+T N
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 262 MISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRF 321
MI +G +E + +L GVK D+ N + + R G ++ ++ M++
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 322 FFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSIT 363
P YN +I + G E E K+M+ G ++ T
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 328 TYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQV 387
TY+I+I F + + KM G +PN +T SL++ Y + I + +++ Q+
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 388 ENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMT 447
+ +T FN +I + L M + C PD +T+ ++ G T
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 448 EAAQNLENKM 457
+ A NL NKM
Sbjct: 238 DLAFNLLNKM 247
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 132 bits (332), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 176/381 (46%), Gaps = 10/381 (2%)
Query: 93 KWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPE--QASLLFEVMLSDGLKPSVD 150
K + A+++ + Q+ Y T +++ C+ A L + M G P V
Sbjct: 219 KLKQAMEVLDRMLQRDCYP---DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAE 210
Y LV+ + G LDEA +NDM S S C+P+V T++I+++S R+ EK+LA+
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 211 MSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSG 270
M G S VT+N +I+ + M + G C P+ + N ++ +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG-CQPNSLSYNPLLHGFCKEK 393
Query: 271 NIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYN 330
+++ ++ G DI T N + + + G + +++ + + P ++TYN
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 331 IVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENS 390
VI+ KAG K + +M+ + +KP++ITY SLV S+ G + + + E
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 391 DVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAA 450
+ + FN I+ ++ ++ + + M R C P+ ++ +I+ GM + A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 451 QNLENKMIA---MKENSGKKL 468
L N++ MK++S +++
Sbjct: 574 LELLNELCNKGLMKKSSAEQV 594
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 166/353 (47%), Gaps = 22/353 (6%)
Query: 114 CQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIN 173
C T + LGK ++ A+ + E++ G P V Y ++S Y ++G ++ A S ++
Sbjct: 140 CTTLIRGFCRLGKTRK---AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD 196
Query: 174 DMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIID----- 228
M SVS PDV TY+ +++S + ++L M +TY +I+
Sbjct: 197 RM-SVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 229 -GYGKAKKF-EEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
G G A K +EM GC PD+ T N +++ G +++ K+ N+ G
Sbjct: 253 SGVGHAMKLLDEMRDR--------GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ ++ T NI+ +S G + ++ M ++ F P+VVT+NI+I + G + +
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
+ +KM G +PNS++Y L+ + K + + L ++ + D +N +++A
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL 424
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
+ G VE E+ + + C P IT+ T+I G T A L ++M A
Sbjct: 425 CKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 32/328 (9%)
Query: 161 QSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSA 220
++G L+E F + +M + PD+ + LI+ + + KIL + G
Sbjct: 114 RTGELEEGFKFLENMVYHGNV-PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 221 VTYNTIIDGYGKAKK-------FEEMESS---------FSAMVESG-------------- 250
+TYN +I GY KA + + M S ++ +SG
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 251 -GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDK 309
C+PD+ T +I A + K +E G D+ T N+L + G D+
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 310 MRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVS 369
++ M P V+T+NI++ + G E+ M +G P+ +T+ L++
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 370 AYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVP 429
+ GL+ + IL ++ ++ +N ++ + + +++ E M R C P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 430 DNITFATMIQAYNALGMTEAAQNLENKM 457
D +T+ TM+ A G E A + N++
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 12/235 (5%)
Query: 231 GKAKKFEEMESSFS--------AMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEF 282
G+A+KFE + S +S + V S D+ + N+ + +G +E+ K+
Sbjct: 70 GRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVES-NNHLRQMVRTGELEEGFKFLENM 128
Query: 283 NLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHI 342
G DI L + + R G K +++ ++ P V+TYN++I + KAG I
Sbjct: 129 VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188
Query: 343 EKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCI 402
+M + P+ +TY +++ + +G + + +L ++ D D + +
Sbjct: 189 NNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 403 ISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
I A + V +L M++R C PD +T+ ++ G + A N M
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 338 KAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTP 397
+ G +E+ ++ + M + G P+ I +L+ + + G K IL +E S + D
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 398 FFNCIISAYGQAGDVEKMGELFLTMKERHCV-PDNITFATMIQAYNALGMTEAAQNLENK 456
+N +IS Y +AG++ L++ +R V PD +T+ T++++ G + A + ++
Sbjct: 174 TYNVMISGYCKAGEINNA----LSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 457 MI 458
M+
Sbjct: 230 ML 231
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 37/352 (10%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
Y+ TF+ L+ L + +A L + M+ G KP + LV+ SG EA
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
I+ M C+P+ TY ++ K + L ++L +M I+ AV Y+ IIDG
Sbjct: 214 LLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
K G+++ +NE + G+
Sbjct: 273 LCK------------------------------------HGSLDNAFNLFNEMEMKGITT 296
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
+I T NIL + AG +D ++ M KR P VVT++++I++F K G + + EE
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQA 409
K+M HRG+ P++ITY SL+ + K + K + ++ + + + FN +I+ Y +A
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKA 416
Query: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMK 461
++ ELF M R V D +T+ T+IQ + LG A+ L +M++ K
Sbjct: 417 NRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 151/347 (43%), Gaps = 2/347 (0%)
Query: 111 QARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFS 170
Q T+ ++ ++ K Q A L M +K Y+ ++ + G LD AF+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 171 TINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGY 230
N+M+ + ++ TY+ILI R+D K+L +M I + VT++ +ID +
Sbjct: 285 LFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 231 GKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKAD 290
K K E E M+ G PD T S+I + +++K + + G +
Sbjct: 344 VKEGKLREAEELHKEMIHRG-IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 291 IQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFK 350
I+T NIL Y +A D + M R VTYN +I+ F + G + +E F+
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+M R + PN +TY L+ G K I ++E S + LD +N II A
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 411 DVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
V+ +LF ++ + P T+ MI G A+ L KM
Sbjct: 523 KVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 170/377 (45%), Gaps = 12/377 (3%)
Query: 80 PVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQP--EQASLLF 137
PVL + K + LA++ LLR+ + + +++ G CK + A LF
Sbjct: 233 PVLNVM---CKSGQTALAME---LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 138 EVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTK 197
M G+ ++ Y L+ + +G D+ + DM P+V T+S+LI S K
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLIDSFVK 345
Query: 198 FHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIF 257
+ E++ EM + GI +TY ++IDG+ K ++ MV S GC P+I
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV-SKGCDPNIR 404
Query: 258 TLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFM 317
T N +I+ Y + I+ + + + +L GV AD T N L + + G + + + M
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 318 QKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLI 377
R P +VTY I+++ G EK E F+K++ M+ + Y ++ A +
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 378 MKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATM 437
+ + V +N +I + G + + LF M+E PD T+ +
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 438 IQAYNALGMTEAAQNLE 454
I+A+ LG +A ++++
Sbjct: 585 IRAH--LGDGDATKSVK 599
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 153/338 (45%), Gaps = 16/338 (4%)
Query: 129 QPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTY 188
+ + A LF M+ P+V ++ L SA ++ D + M+ + ++YT
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME-LKGIAHNLYTL 126
Query: 189 SILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVE 248
SI+I + + L + ++ LG E + +T++T+I+G + E MVE
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 249 SGGCHPDIFTLNSMISAYGNSGN-------IEKMEKWYNEFNLMGVKADIQTLNILTKSY 301
G PD+ T+N++++ SG I+KM ++ + N + LN++ KS
Sbjct: 187 MGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP---VLNVMCKSG 242
Query: 302 GRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNS 361
A + +R M++R V Y+I+I+ K G ++ F +M+ +G+ N
Sbjct: 243 QTALAMELLRK----MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 298
Query: 362 ITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLT 421
ITY L+ + AG +LR + + + F+ +I ++ + G + + EL
Sbjct: 299 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 358
Query: 422 MKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
M R PD IT+ ++I + + A + + M++
Sbjct: 359 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 161 QSGLLD----EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
+SGL+D +A DM S P V +S L + K ++DL+ + +M GI
Sbjct: 61 RSGLVDIKADDAIDLFRDMIH-SRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGI 119
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAM--VESGGCHPDIFTLNSMISAYGNSGNIEK 274
+ T + +I+ + + +K + +FSAM + G P+ T +++I+ G + +
Sbjct: 120 AHNLYTLSIMINCFCRCRK---LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSE 176
Query: 275 MEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIE 334
+ + MG K D+ T+N L +G + ++D M + P VTY V+
Sbjct: 177 ALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLN 236
Query: 335 TFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVIL 394
K+G E +KM+ R +K +++ Y ++ K G + ++ ++E +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITT 296
Query: 395 DTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLE 454
+ +N +I + AG + +L M +R P+ +TF+ +I ++ G A+ L
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 455 NKMI 458
+MI
Sbjct: 357 KEMI 360
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 184/386 (47%), Gaps = 37/386 (9%)
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
+ Y+ TFT L+ L + +A L + M+ G +P++ Y +V+ + G +D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 167 EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTI 226
AF+ +N M++ + + +V YS +I S K+ D + EM G+ + +TY+++
Sbjct: 243 LAFNLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 227 IDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
I +++ + S M+E +P++ T N++I A+ G + + EK Y+E
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERK-INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ DI T + L + D+ + + + M + FP VVTYN +I F KA I++
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKA----------------GL---IMKVDSILR-- 385
E F++M RG+ N++TY +L+ + +A G+ IM +++L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 386 ----QVENSDVILD---------TPF-FNCIISAYGQAGDVEKMGELFLTMKERHCVPDN 431
++E + V+ + T + +N +I +AG VE +LF ++ + PD
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDV 540
Query: 432 ITFATMIQAYNALGMTEAAQNLENKM 457
I + TMI + G+ E A L KM
Sbjct: 541 IIYNTMISGFCRKGLKEEADALFRKM 566
Score = 119 bits (297), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 152/313 (48%), Gaps = 3/313 (0%)
Query: 84 ALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSD 143
+D K + AL +F + + + + T++ L+ L ++ AS L M+
Sbjct: 266 VIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 144 GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDL 203
+ P+V + AL+ A+ + G L EA ++M S PD++TYS LI R D
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDE 383
Query: 204 IEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMI 263
+ + M + VTYNT+I+G+ KAK+ +E F M + G + T ++I
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG-LVGNTVTYTTLI 442
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
+ + + + + + + GV +I T N L + G +K V +++Q+
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 324 PTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
PT+ TYNI+IE KAG +E + F + +G+KP+ I Y +++S + + GL + D++
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 384 LRQVENSDVILDT 396
R++ + D+
Sbjct: 563 FRKMREDGPLPDS 575
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 166/370 (44%), Gaps = 38/370 (10%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ + LAL + G + + Y+ T + L+ K+ A L + M+ G +P
Sbjct: 132 RRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+T L+ EA + ++ M C+P++ TY +++ K DL +L
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
+M IE + V Y+T+ID K + ++ + F+ M E+ G P++ T +S+IS N
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCN- 307
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
E+W D R + D ++++ P VVT+
Sbjct: 308 -----YERWS----------------------------DASRLLSDMIERKIN-PNVVTF 333
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +I+ F K G + + E+ + +M R + P+ TY SL++ + + + + + +
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
D + +N +I+ + +A +++ ELF M +R V + +T+ T+I + +
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 450 AQNLENKMIA 459
AQ + +M++
Sbjct: 454 AQMVFKQMVS 463
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 157/335 (46%), Gaps = 4/335 (1%)
Query: 101 FGLLRQQQW--YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSA 158
F LL + + +A ++ ++ L K + + A LF M + G++P+V Y++L+S
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 159 YGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIEC 218
+A ++DM P+V T++ LI + K + EK+ EM I+
Sbjct: 305 LCNYERWSDASRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
TY+++I+G+ + +E + F M+ S C P++ T N++I+ + + I++ +
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ E + G+ + T L + +A D + V M P ++TYN +++ K
Sbjct: 423 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 482
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
G +EK F+ ++ M+P TY ++ KAG + + + V D
Sbjct: 483 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVII 542
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNIT 433
+N +IS + + G E+ LF M+E +PD+ T
Sbjct: 543 YNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 149/336 (44%), Gaps = 49/336 (14%)
Query: 165 LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYN 224
LD+A M S P ++ ++ L+ + K +FDL+ + +M LGI + TYN
Sbjct: 66 LDDAIGLFGGMVK-SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 225 TIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
+I+ + + + + M++ G P I TL+S+++ Y + I ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 285 MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIE- 343
MG + D T L + +++D M +R P +VTY +V+ K G I+
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 344 ------KME----------------------------EYFKKMKHRGMKPNSITYCSLVS 369
KME F +M+++G++PN ITY SL+S
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 370 A------YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMK 423
+S A ++ D I R++ N +V+ FN +I A+ + G + + +L+ M
Sbjct: 304 CLCNYERWSDASRLLS-DMIERKI-NPNVVT----FNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 424 ERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
+R PD T++++I + + A+++ MI+
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 98/256 (38%), Gaps = 38/256 (14%)
Query: 208 LAEMSYLGIECSAVT--YNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISA 265
L M Y G S+ + Y I+ + K ++ F MV+S P IF N ++SA
Sbjct: 36 LCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPL-PSIFEFNKLLSA 94
Query: 266 YGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPT 325
I KM+K +D + S+ + MQ+
Sbjct: 95 ------IAKMKK-----------------------------FDLVISLGEKMQRLGISHN 119
Query: 326 VVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILR 385
+ TYNI+I F + I KM G +P+ +T SL++ Y I +++
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 386 QVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALG 445
Q+ DT F +I + L M +R C P+ +T+ ++ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 446 MTEAAQNLENKMIAMK 461
+ A NL NKM A K
Sbjct: 240 DIDLAFNLLNKMEAAK 255
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 2/347 (0%)
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
+ Y+ TFT L+ L + +A L + M+ G +P++ Y +V+ + G +D
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 167 EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTI 226
AF+ +N M++ + + DV ++ +I S K+ D + EM GI + VTY+++
Sbjct: 168 LAFNLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 227 IDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
I ++ + S M+E +P++ T N++I A+ G + EK +++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ DI T N L + DK + + +FM + FP + TYN +I+ F K+ +E
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
E F++M HRG+ +++TY +L+ G + +Q+ + V D ++ ++
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G +EK E+F M++ D + TMI+ G + +L
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 3/351 (0%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K + AL +F + + + + T++ L+ L + AS L M+
Sbjct: 192 IDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P++ + AL+ A+ + G EA +DM S PD++TY+ LI R D
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS-IDPDIFTYNSLINGFCMHDRLDKA 309
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
+++ M TYNT+I G+ K+K+ E+ F M G D T ++I
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG-LVGDTVTYTTLIQ 368
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ G+ + +K + + GV DI T +IL G +K V D+MQK
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
+ Y +IE KAG ++ + F + +G+KPN +TY +++S L+ + ++L
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
++++ + D+ +N +I A+ + GD EL M+ V D T
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG 539
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 38/370 (10%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ + LAL + G + + Y+ T + L+ K+ A L + M+ G +P
Sbjct: 57 RRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 115
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+T L+ EA + ++ M C+P++ TY +++ K DL +L
Sbjct: 116 ITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 174
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
+M IE V +NTIID K + ++ + F M E+ G P++ T +S+IS +
Sbjct: 175 KMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSY 233
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
G +W + L+ D ++K+ P +VT+
Sbjct: 234 G------RWSDASQLLS----------------------------DMIEKKIN-PNLVTF 258
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +I+ F K G + E+ M R + P+ TY SL++ + + K + + +
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
D D +N +I + ++ VE ELF M R V D +T+ T+IQ G +
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 450 AQNLENKMIA 459
AQ + +M++
Sbjct: 379 AQKVFKQMVS 388
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P ++ ++ L+ + K +FDL+ + +M LGI + TYN +I+ + + + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
M++ G P I TL+S+++ Y + I ++ MG + D T L
Sbjct: 68 LGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIE-------KME--------- 346
+ +++D M +R P +VTY +V+ K G I+ KME
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 347 -------------------EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQV 387
FK+M+ +G++PN +TY SL+S G +L +
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 388 ENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAY 441
+ + FN +I A+ + G + +L M +R PD T+ ++I +
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 100/245 (40%), Gaps = 35/245 (14%)
Query: 254 PDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSV 313
P IF N ++SA + + + +G+ ++ T NIL + R ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 314 MDFMQKRFFFPTVVTYNIVIETF--GK-----AGHIEKMEE------------------- 347
+ M K + P++VT + ++ + GK +++M E
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 348 ---------YFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+M RG +PN +TY +V+ K G I ++L ++E + + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
FN II + + V+ LF M+ + P+ +T++++I + G A L + MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 459 AMKEN 463
K N
Sbjct: 248 EKKIN 252
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 130 bits (326), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 177/378 (46%), Gaps = 8/378 (2%)
Query: 84 ALDEAIKQKK-WQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKC--KQPEQASLLFEVM 140
LD I+ K+ A +F ++ Q FT +++ G C + A LF+ M
Sbjct: 175 VLDATIRSKRNISFAENVF---KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 141 LSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHR 200
+ G P+V Y L+ Y + +D+ F + M ++ +P++ +Y+++I + R
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGR 290
Query: 201 FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLN 260
+ +L EM+ G VTYNT+I GY K F + + M+ G P + T
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG-LTPSVITYT 349
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
S+I + +GN+ + ++ ++ + G+ + +T L + + G ++ V+ M
Sbjct: 350 SLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Query: 321 FFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKV 380
F P+VVTYN +I G +E + MK +G+ P+ ++Y +++S + ++ + +
Sbjct: 410 GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA 469
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
+ R++ + DT ++ +I + + ++ +L+ M PD T+ +I A
Sbjct: 470 LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Query: 441 YNALGMTEAAQNLENKMI 458
Y G E A L N+M+
Sbjct: 530 YCMEGDLEKALQLHNEMV 547
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 192/447 (42%), Gaps = 63/447 (14%)
Query: 47 AEKDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGLLRQ 106
A+K L+ + R + + ++ + + NL K Q L LK
Sbjct: 25 ADKALTFLKRHPYQLHHLSANFTPEAASNLLLK----------SQNDQALILKFLNWANP 74
Query: 107 QQWYQARCQTFTKLMV---------------MLGKCKQPEQASLLFEVMLS--DGLKPSV 149
Q++ RC+ T ++ + K E ASL+F+ + D +
Sbjct: 75 HQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTS 134
Query: 150 DVYTALVSAYGQSGLLDEAFS-----------------------TINDMKSVS------- 179
V+ +V +Y + L+D+A S TI +++S
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 180 -----DCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
P+V+TY+ILI+ D+ + +M G + VTYNT+IDGY K +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
K ++ +M G P++ + N +I+ G ++++ E N G D T
Sbjct: 255 KIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N L K Y + G + + + M + P+V+TY +I + KAG++ + E+ +M+
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
RG+ PN TY +LV +S+ G + + +LR++ ++ +N +I+ + G +E
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
Query: 415 MGELFLTMKERHCVPDNITFATMIQAY 441
+ MKE+ PD ++++T++ +
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 164/386 (42%), Gaps = 59/386 (15%)
Query: 98 LKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVS 157
+++ GL ++ Y F++ M +A + M +G PSV Y AL++
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYM-------NEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 158 AYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIE 217
+ +G +++A + + DMK PDV +YS ++ + + D ++ EM GI+
Sbjct: 424 GHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 218 CSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEK 277
+TY+++I G+ + ++ +E + M+ G PD FT ++I+AY G++EK +
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 278 WYNEFNLMGVKADIQTLNILT--------------------------------------- 298
+NE GV D+ T ++L
Sbjct: 542 LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS 601
Query: 299 -----------KSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEE 347
K + GM + V + M + P YNI+I +AG I K
Sbjct: 602 NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYT 661
Query: 348 YFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYG 407
+K+M G +++T +LV A K G + +++S++ V S + + ++
Sbjct: 662 LYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINH 721
Query: 408 QAGDVEKMGELFLTMKERHCVPDNIT 433
+ G+++ + ++ M + +P+ I+
Sbjct: 722 REGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LYT2|PP287_ARATH Pentatricopeptide repeat-containing protein At3g59040
OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2
Length = 583
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 92 KKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDV 151
KKW L +I LR Q W+ F L+ GK A + V+ G P+V
Sbjct: 117 KKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 176
Query: 152 YTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKI---L 208
YTAL+ +YG+ G + A + M+S S +P TY I++K+ + +F E++ L
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQS-SGPEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 209 AEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGN 268
+ ++ Y+ +I Y KA +E+ FS+MV G + T NS++S +
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV-TYNSLMSFETS 294
Query: 269 SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVT 328
+ K+ Y++ ++ D+ + +L K+YGRA ++ SV + M PT
Sbjct: 295 YKEVSKI---YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 329 YNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
YNI+++ F +G +E+ + FK M+ + P+ +Y +++SAY A + + ++++
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 411
Query: 389 NSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
+ + +I Y +A DVEKM E++ M+ + T++ A
Sbjct: 412 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 120 LMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVS---AYGQSGLLDEAFSTINDMK 176
++ M K E+A +F M+ G+ S Y +L+S +Y + S I D
Sbjct: 253 MIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE-------VSKIYDQM 305
Query: 177 SVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKF 236
SD +PDV +Y++LIK+ + R + + EM G+ + YN ++D + +
Sbjct: 306 QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMV 365
Query: 237 EEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNI 296
E+ ++ F +M PD+++ +M+SAY N+ ++E EK++ + G + +I T
Sbjct: 366 EQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGT 424
Query: 297 LTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRG 356
L K Y +A +KM V + M+ +++ G+ + ++K+M+ G
Sbjct: 425 LIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCG 484
Query: 357 MKPNSITYCSLVSAYS 372
+ P+ L+S S
Sbjct: 485 VPPDQKAKNVLLSLAS 500
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 262 MISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRF 321
+I+AYG GN E+ + + MG ++ + L +SYGR G + ++ MQ
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 322 FFPTVVTYNIVIETFGKAGHIEKMEEYFKKM---KHRGMKPNSITYCSLVSAYSKAGLIM 378
P+ +TY I+++TF + ++ EE F+ + K +KP+ Y ++ Y KAG
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 379 KVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMI 438
K + + V T +N ++S +V K ++ M+ PD +++A +I
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLI 321
Query: 439 QAYNALGMTEAAQNLENKMI 458
+AY E A ++ +M+
Sbjct: 322 KAYGRARREEEALSVFEEML 341
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Query: 327 VTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQ 386
+ + ++I +GK G+ E + G PN I+Y +L+ +Y + G ++I R+
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 387 VENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTM---KERHCVPDNITFATMIQAYNA 443
+++S + I+ + + ++ E+F T+ K+ PD + MI Y
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 444 LGMTEAAQNLENKMIA 459
G E A+ + + M+
Sbjct: 260 AGNYEKARKVFSSMVG 275
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280,
chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2
SV=1
Length = 723
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 154/307 (50%), Gaps = 3/307 (0%)
Query: 136 LFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSC 195
+FE M G+K S DV+ LV ++ GL +EA +M+ + + Y+ L+ +
Sbjct: 331 IFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEK-KGIRSNTIVYNTLMDAY 389
Query: 196 TKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPD 255
K + + +E + EM G++ SA TYN ++D Y + + + +E+ M E G P+
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPN 448
Query: 256 IFTLNSMISAYGNSGNIEKME-KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVM 314
+ + +ISAYG + + M + +G+K + L +Y +G ++K +
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 315 DFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKA 374
+ M K P+V TY V++ F ++G K+ E +K M +K ITY +L+ ++K
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 375 GLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITF 434
GL ++ ++ + + +N +++AY + G K+ +L M + PD+IT+
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITY 628
Query: 435 ATMIQAY 441
+TMI A+
Sbjct: 629 STMIYAF 635
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 151/304 (49%), Gaps = 1/304 (0%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
E+A ++ M G++ + VY L+ AY +S ++E +M+ KP TY+I
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRD-KGLKPSAATYNI 419
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESG 250
L+ + + + D++E +L EM LG+E + +Y +I YG+ KK +M + ++
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 251 GCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKM 310
G P + ++I AY SG EK + E G+K ++T + ++ R+G K+
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 311 RSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSA 370
+ M + T +TYN +++ F K G + + + G++P+ +TY L++A
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNA 599
Query: 371 YSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPD 430
Y++ G K+ +L+++ ++ D+ ++ +I A+ + D ++ M + VPD
Sbjct: 600 YARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPD 659
Query: 431 NITF 434
++
Sbjct: 660 PRSY 663
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 155/329 (47%), Gaps = 15/329 (4%)
Query: 51 LSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEAL-----DEAIKQKKWQLALKIFGLLR 105
L K R+ + I +K+S K K W + V L DE +K++ + ++
Sbjct: 318 LRKAGRSAKEVWEIFEKMSEKGVK--WSQDVFGGLVKSFCDEGLKEEALVIQTEM----- 370
Query: 106 QQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLL 165
+++ ++ + LM K E+ LF M GLKPS Y L+ AY +
Sbjct: 371 EKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQP 430
Query: 166 DEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRF-DLIEKILAEMSYLGIECSAVTYN 224
D + + +M+ + +P+V +Y+ LI + + + D+ M +G++ S+ +Y
Sbjct: 431 DIVETLLREMEDLG-LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYT 489
Query: 225 TIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
+I Y + E+ +SF M + G P + T S++ A+ SG+ K+ + +
Sbjct: 490 ALIHAYSVSGWHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLR 548
Query: 285 MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEK 344
+K T N L + + G+Y + R V+ K P+V+TYN+++ + + G K
Sbjct: 549 EKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAK 608
Query: 345 MEEYFKKMKHRGMKPNSITYCSLVSAYSK 373
+ + K+M +KP+SITY +++ A+ +
Sbjct: 609 LPQLLKEMAALNLKPDSITYSTMIYAFVR 637
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 152/336 (45%), Gaps = 4/336 (1%)
Query: 120 LMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS 179
L +LG+ + + LL + V +Y A +S S D+A+ M +
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKI- 302
Query: 180 DCKPDVYTYSILIKSCTKFHR-FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEE 238
+ PD T +ILI + K R + +I +MS G++ S + ++ + + +E
Sbjct: 303 NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCD-EGLKE 361
Query: 239 MESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILT 298
+E G + N+++ AY S +IE++E + E G+K T NIL
Sbjct: 362 EALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILM 421
Query: 299 KSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME-EYFKKMKHRGM 357
+Y R D + +++ M+ P V +Y +I +G+ + M + F +MK G+
Sbjct: 422 DAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGL 481
Query: 358 KPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGE 417
KP+S +Y +L+ AYS +G K + ++ + + ++ A+ ++GD K+ E
Sbjct: 482 KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 418 LFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
++ M IT+ T++ + G+ A+++
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDV 577
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 2/348 (0%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
+Q T+ ++ L K A LF M +K SV Y+ ++ + + G D+A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
S N+M+ + K DV TYS LI ++D K+L EM I VT++ +ID
Sbjct: 266 SLFNEME-MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
+ K K E + ++ M+ + G PD T NS+I + + + + ++ G +
Sbjct: 325 FVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
DI T +IL SY +A D + + + P +TYN ++ F ++G + +E F
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELF 443
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQA 409
++M RG+ P+ +TY L+ G + K I +++ S + L +N II A
Sbjct: 444 QEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA 503
Query: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
V+ LF ++ ++ PD +T+ MI G A L KM
Sbjct: 504 SKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 162/364 (44%), Gaps = 10/364 (2%)
Query: 80 PVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQP--EQASLLF 137
PVL L K LAL +F R+ + + +V+ CK + A LF
Sbjct: 215 PVLNRL---CKSGNSALALDLF---RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 138 EVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTK 197
M G+K V Y++L+ G D+ + +M + PDV T+S LI K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-RNIIPDVVTFSALIDVFVK 327
Query: 198 FHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIF 257
+ +++ EM GI +TYN++IDG+ K E F MV S GC PDI
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV-SKGCEPDIV 386
Query: 258 TLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFM 317
T + +I++Y + ++ + + E + G+ + T N L + ++G + + + M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 318 QKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLI 377
R P+VVTY I+++ G + K E F+KM+ M Y ++ A +
Sbjct: 447 VSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKV 506
Query: 378 MKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATM 437
S+ + + V D +N +I + G + + LF MKE C PD+ T+ +
Sbjct: 507 DDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Query: 438 IQAY 441
I+A+
Sbjct: 567 IRAH 570
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 145/316 (45%), Gaps = 2/316 (0%)
Query: 144 GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDL 203
G +P ++ LV+ + G + EA + ++ M + +PD+ T S LI R
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPDLVTVSTLINGLCLKGRVSE 193
Query: 204 IEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMI 263
++ M G + VTY +++ K+ F M E + + +I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVI 252
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
+ G+ + +NE + G+KAD+ T + L G +D ++ M R
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNII 312
Query: 324 PTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
P VVT++ +I+ F K G + + +E + +M RG+ P++ITY SL+ + K + + + +
Sbjct: 313 PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQM 372
Query: 384 LRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNA 443
+ + D ++ +I++Y +A V+ LF + + +P+ IT+ T++ +
Sbjct: 373 FDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ 432
Query: 444 LGMTEAAQNLENKMIA 459
G AA+ L +M++
Sbjct: 433 SGKLNAAKELFQEMVS 448
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 10/310 (3%)
Query: 136 LFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSC 195
LFE M+ P+ + L SA ++ D M+ ++ + D+YT +I+I
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMINCY 115
Query: 196 TKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPD 255
+ + +L LG E +T++T+++G+ + E + MVE PD
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ-RPD 174
Query: 256 IFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQT----LNILTKSYGRAGMYDKMR 311
+ T++++I+ G + + + G + D T LN L KS A D R
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFR 234
Query: 312 SVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAY 371
M++R +VV Y+IVI++ K G + F +M+ +G+K + +TY SL+
Sbjct: 235 K----MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 372 SKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDN 431
G +LR++ ++I D F+ +I + + G + + EL+ M R PD
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 432 ITFATMIQAY 441
IT+ ++I +
Sbjct: 351 ITYNSLIDGF 360
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 127/304 (41%), Gaps = 73/304 (24%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TF+ L+ + K + +A L+ M++ G+ P Y +L+ + + L EA + + D+
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA-NQMFDL 375
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
C+PD+ TYSILI S K R D ++ E+S G+ + +TYNT++ G+ ++ K
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNI-------EKMEK----------- 277
+ F MV S G P + T ++ ++G + EKM+K
Sbjct: 436 LNAAKELFQEMV-SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 278 ---------------W--YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
W + + GVK D+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDV----------------------------- 525
Query: 321 FFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAY-SKAGLIMK 379
VTYN++I K G + + + F+KMK G P+ TY L+ A+ +GLI
Sbjct: 526 ------VTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 380 VDSI 383
V+ I
Sbjct: 580 VELI 583
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 92/215 (42%), Gaps = 1/215 (0%)
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
F +M++S P N + SA + + + + L G++ D+ T+ I+ Y
Sbjct: 58 FESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSI 362
R SV+ K + P +T++ ++ F G + + +M +P+ +
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 363 TYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTM 422
T +L++ G + + ++ ++ D + +++ ++G+ +LF M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 423 KERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
+ER+ + ++ +I + G + A +L N+M
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 175/377 (46%), Gaps = 37/377 (9%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ +L+ + ++A+ + E+M G+ P+ YT ++ AYG++G DEA M
Sbjct: 353 TYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 412
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
K + C P+ TY+ ++ K R + + K+L +M G + T+NT++ G
Sbjct: 413 KE-AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+ + F M +S G PD T N++ISAYG G+ K Y E G A + T N
Sbjct: 472 DKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYN 530
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGH---IEKMEEYFKK- 351
L + R G + +V+ M+ + F PT +Y+++++ + K G+ IE++E K+
Sbjct: 531 ALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEG 590
Query: 352 -------------------------------MKHRGMKPNSITYCSLVSAYSKAGLIMKV 380
K G KP+ + + S++S +++ + +
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
+ IL + + D +N ++ Y + G+ K E+ T+++ PD +++ T+I+
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
Query: 441 YNALGMTEAAQNLENKM 457
+ G+ + A + ++M
Sbjct: 711 FCRRGLMQEAVRMLSEM 727
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 174/425 (40%), Gaps = 47/425 (11%)
Query: 71 KKYKNLWPKPVLEALDEAIK-----QKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLG 125
++ K + P P L + + + W+ KI G+L + + + FT +L
Sbjct: 234 ERMKEMGPSPTLVTYNVILDVFGKMGRSWR---KILGVLDEMRSKGLKFDEFT-CSTVLS 289
Query: 126 KCKQP---EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCK 182
C + +A F + S G +P Y AL+ +G++G+ EA S + +M+ S C
Sbjct: 290 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS-CP 348
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
D TY+ L+ + + ++ M+ G+ +A+TY T+ID YGKA K +E
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 243 FSAMVESG----------------------------------GCHPDIFTLNSMISAYGN 268
F +M E+G GC P+ T N+M++ GN
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 269 SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVT 328
G + + + + E G + D T N L +YGR G + M + F V T
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 329 YNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
YN ++ + G E MK +G KP +Y ++ Y+K G + ++ I +++
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 389 NSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTE 448
+ ++ A + + F K+ PD + F +M+ + M +
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 449 AAQNL 453
A+ +
Sbjct: 649 QAEGI 653
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 173/390 (44%), Gaps = 14/390 (3%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ ++ +A K+ + Q+ Y + +T ++ + + E+A LFE M G P++
Sbjct: 187 RESQYSVAAKLLDKIPLQE-YLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTL 245
Query: 150 DVYTALVSAYGQSGL-LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKIL 208
Y ++ +G+ G + +++M+S K D +T S ++ +C + ++
Sbjct: 246 VTYNVILDVFGKMGRSWRKILGVLDEMRS-KGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 209 AEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGN 268
AE+ G E VTYN ++ +GKA + E S M E C D T N +++AY
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM-EENSCPADSVTYNELVAAYVR 363
Query: 269 SGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVT 328
+G ++ GV + T + +YG+AG D+ + M++ P T
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 329 YNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVE 388
YN V+ GK +M + MK G PN T+ ++++ G+ V+ + R+++
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMK 483
Query: 389 NSDVILDTPFFNCIISAYGQAG---DVEKMGELFLTMKERHCVPDNITFATMIQAYNALG 445
+ D FN +ISAYG+ G D KM CV T+ ++ A G
Sbjct: 484 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV---TTYNALLNALARKG 540
Query: 446 MTEAAQN----LENKMIAMKENSGKKLIQC 471
+ +N +++K E S ++QC
Sbjct: 541 DWRSGENVISDMKSKGFKPTETSYSLMLQC 570
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 202/469 (43%), Gaps = 19/469 (4%)
Query: 1 MHLSNSIFTPPTTATHLPKFYKEPVFRIQAIKRSPGPIQELGIQKEAEKDLSKILRTEFA 60
+HLS+ PP + + P + S PI + I+ E L + + E
Sbjct: 56 VHLSSP---PPRHSNSAAARF--PSLEVSTDSSSSKPILGIEIENERNGSLKLLCKKEVV 110
Query: 61 IKN--IEKKVS--SKKYKNLWPKPVLEALDEAIK----QKKWQLALKIFGLL---RQQQW 109
+ N +E+ ++ S+ + ++ + + L +K W+ A+ +F L
Sbjct: 111 LVNSIVEQPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGA 170
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
+ Q + +LG+ Q A+ L + + V YT ++ AY ++G ++A
Sbjct: 171 LKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAI 230
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHR-FDLIEKILAEMSYLGIECSAVTYNTIID 228
MK + P + TY++++ K R + I +L EM G++ T +T++
Sbjct: 231 DLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 289
Query: 229 GYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVK 288
+ E + F A ++S G P T N+++ +G +G + E
Sbjct: 290 ACAREGLLREAKEFF-AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCP 348
Query: 289 ADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEY 348
AD T N L +Y RAG + V++ M K+ P +TY VI+ +GKAG ++ +
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 349 FKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQ 408
F MK G PN+ TY +++S K ++ +L ++++ + +N +++ G
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 409 AGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
G + + +F MK PD TF T+I AY G A + +M
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 170/411 (41%), Gaps = 70/411 (17%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+T ++ GK + ++A LF M G P+ Y A++S G+ +E + DM
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGK--- 232
KS + C P+ T++ ++ C + ++ EM G E T+NT+I YG+
Sbjct: 448 KS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 233 ----AKKFEEM-ESSFSAMV--------------------------ESGGCHPDIFTLNS 261
+K + EM + F+A V +S G P + +
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 262 MISAYGNSGN---IEKMEK----------W----------------------YNEFNLMG 286
M+ Y GN IE++E W + F G
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
K D+ N + + R MYD+ +++ +++ P +VTYN +++ + + G K E
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
E K ++ +KP+ ++Y +++ + + GL+ + +L ++ + +N +S Y
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
G ++ ++ M + C P+ +TF ++ Y G A + +K+
Sbjct: 747 TAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 136/296 (45%), Gaps = 2/296 (0%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
TF L+ G+C AS ++ M G V Y AL++A + G + I+D
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
MKS KP +YS++++ K + IE+I + I S + T++ K +
Sbjct: 552 MKS-KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
E +F+ + + G PD+ NSM+S + + ++ E G+ D+ T
Sbjct: 611 ALAGSERAFT-LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N L Y R G K ++ ++K P +V+YN VI+ F + G +++ +M
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTE 729
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
RG++P TY + VS Y+ G+ +++ ++ + +D + F ++ Y +AG
Sbjct: 730 RGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
>sp|O65567|PP342_ARATH Pentatricopeptide repeat-containing protein At4g30825,
chloroplastic OS=Arabidopsis thaliana GN=At4g30825 PE=2
SV=2
Length = 904
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 160/328 (48%), Gaps = 11/328 (3%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T + ++G+ + E+ L+ + S G+ ++ +V Y ++G L+EA S + M
Sbjct: 563 TMIDIYTVMGEFSEAEK---LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIM 619
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
D PDVY + +++ K D ++ + + GI + YN +I+ +A
Sbjct: 620 DEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALP 679
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVK---ADIQ 292
+E+ +F M+ G P+ T N ++ YG + K+ K NE L+ + D+
Sbjct: 680 LDELSGTFEEMIRYGFT-PNTVTFNVLLDVYGKA----KLFKKVNELFLLAKRHGVVDVI 734
Query: 293 TLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKM 352
+ N + +YG+ Y M S + MQ F ++ YN +++ +GK +EK K+M
Sbjct: 735 SYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRM 794
Query: 353 KHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDV 412
K P+ TY +++ Y + G I +V +L++++ S + D +N +I AYG G V
Sbjct: 795 KKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMV 854
Query: 413 EKMGELFLTMKERHCVPDNITFATMIQA 440
E+ L M+ R+ +PD +T+ ++ A
Sbjct: 855 EEAVGLVKEMRGRNIIPDKVTYTNLVTA 882
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 175/411 (42%), Gaps = 58/411 (14%)
Query: 94 WQLALKIFGLLRQQQW---------------YQARCQTFTKLMVMLGKCKQPEQASLLFE 138
+ L L++ G R+++W +Q Q F ++ K + AS F
Sbjct: 177 YSLILRVLG--RREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFH 234
Query: 139 VMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS-DCKPDVYTYSILIKSCTK 197
+ML G++P+V L+ Y ++ ++EA + M+ C+ YS +I T+
Sbjct: 235 MMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES---AYSSMITIYTR 291
Query: 198 FHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIF 257
+D E+++ M + + +++ Y + K E ES +M E+ G P+I
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM-EAAGFSPNII 350
Query: 258 TLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFM 317
N++I+ YG +E + ++ +G++ D + + + +GRA Y++ + +
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Query: 318 QKRFFFP------TVVT----------------------------YNIVIETFGKAGHIE 343
++ + P T++ I+++ + K G I+
Sbjct: 411 KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKID 470
Query: 344 KMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCII 403
+ K H ++ N ++ SLV AY K G++ +LR+ + D ++ ++ +I
Sbjct: 471 VVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLI 530
Query: 404 SAYGQAGDVEKMGELF-LTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
+ ++G + +++ M+ + +IT +TMI Y +G A+ L
Sbjct: 531 CSCKESGQLTDAVKIYNHKMESDEEINLHIT-STMIDIYTVMGEFSEAEKL 580
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 3/265 (1%)
Query: 187 TYSILIKSCTKFHRFDLIEKILAEM-SYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSA 245
YS++++ + +D E ++ E+ + + S +NT+I K + F
Sbjct: 176 AYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHM 235
Query: 246 MVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG 305
M+E G P++ T+ ++ Y + N+E+ E ++ G+ + +++T Y R
Sbjct: 236 MLEFG-VRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMIT-IYTRLR 293
Query: 306 MYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYC 365
+YDK V+D M++ + + +++ + + G +E E M+ G PN I Y
Sbjct: 294 LYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYN 353
Query: 366 SLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKER 425
+L++ Y K + + ++ N + D + +I +G+A + E+ + +K
Sbjct: 354 TLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRC 413
Query: 426 HCVPDNITFATMIQAYNALGMTEAA 450
P++ T+I G + A
Sbjct: 414 GYKPNSFNLFTLINLQAKYGDRDGA 438
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 133/314 (42%), Gaps = 14/314 (4%)
Query: 155 LVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSIL--IKSCTKFHRFDLIEKILAEMS 212
L + + +G +D +S I +S+ C IL ++SC+ + + +
Sbjct: 116 LENLFVNNGEIDVNYSAIKPGQSLEHCN------GILKRLESCSDTNAIKFFDWMRCNGK 169
Query: 213 YLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNI 272
+G + V Y+ I+ G+ ++++ E + N++I A GN+
Sbjct: 170 LVG---NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNV 226
Query: 273 EKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIV 332
+ KW++ GV+ ++ T+ +L Y + ++ M+K F Y+ +
Sbjct: 227 KLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRK-FGIVCESAYSSM 285
Query: 333 IETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDV 392
I + + +K EE MK ++ + +++AYS+ G + +SIL +E +
Sbjct: 286 ITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGF 345
Query: 393 ILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQN 452
+ +N +I+ YG+ +E LF + PD ++ +MI+ + E A++
Sbjct: 346 SPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKH 405
Query: 453 L--ENKMIAMKENS 464
E K K NS
Sbjct: 406 YYQELKRCGYKPNS 419
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 150/299 (50%), Gaps = 3/299 (1%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K K+ A F + +++ + T+T L+ L + A+ L M+
Sbjct: 197 IDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P+V Y+AL+ A+ ++G + EA +M +S PD+ TYS LI R D
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEA 314
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
++ M G V+YNT+I+G+ KAK+ E+ F M + G + T N++I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG-LVSNTVTYNTLIQ 373
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ +G+++K ++++++ + G+ DI T NIL G +K + + MQKR
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
+VTY VI K G +E+ F + +G+KP+ +TY +++S GL+ +V+++
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 167/363 (46%), Gaps = 3/363 (0%)
Query: 95 QLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTA 154
LAL I G + + + R T L+ + + A L + M+ G KP + Y A
Sbjct: 137 SLALSILGKMLKLGYEPDRV-TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 155 LVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYL 214
++ + ++ +++AF +++ +P+V TY+ L+ R+ ++L++M
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIER-KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 215 GIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEK 274
I + +TY+ ++D + K K E + F MV PDI T +S+I+ I++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDE 313
Query: 275 MEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIE 334
+ ++ G AD+ + N L + +A + + M +R VTYN +I+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 335 TFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVIL 394
F +AG ++K +E+F +M G+ P+ TY L+ G + K I ++ ++ L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 395 DTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLE 454
D + +I + G VE+ LF ++ + PD +T+ TM+ G+ + L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 455 NKM 457
KM
Sbjct: 494 TKM 496
Score = 118 bits (296), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 157/338 (46%), Gaps = 2/338 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TF ++ C Q A + ML G +P +LV+ + + + +A S ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ KPD+ Y+ +I S K R + E+ GI + VTY +++G + +
Sbjct: 182 VEIG-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+ + S M++ P++ T ++++ A+ +G + + ++ + E M + DI T +
Sbjct: 241 WSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L D+ + D M + VV+YN +I F KA +E + F++M R
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+ N++TY +L+ + +AG + K Q++ + D +N ++ G++EK
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
+F M++R D +T+ T+I+ G E A +L
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 141/328 (42%), Gaps = 37/328 (11%)
Query: 165 LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYN 224
L++A +DM S P + ++ L+ + K ++D++ + +M LGI T+N
Sbjct: 66 LNDAIDLFSDMVK-SRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 225 TII-----------------------------------DGYGKAKKFEEMESSFSAMVES 249
+I +G+ + + + S MVE
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 250 GGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDK 309
G PDI N++I + + + ++ E G++ ++ T L + +
Sbjct: 185 GY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 310 MRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVS 369
++ M K+ P V+TY+ +++ F K G + + +E F++M + P+ +TY SL++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 370 AYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVP 429
I + + + + + + D +N +I+ + +A VE +LF M +R V
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 430 DNITFATMIQAYNALGMTEAAQNLENKM 457
+ +T+ T+IQ + G + AQ ++M
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
S V +N ++ K KK++ + S +E G D++T N +I+ + +
Sbjct: 84 SIVDFNRLLSAIVKLKKYDVV-ISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ +G + D T+ L + R S++D M + + P +V YN +I++ K
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+ ++FK+++ +G++PN +TY +LV+ + +L + + +
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
++ ++ A+ + G V + ELF M PD +T++++I + A + + M+
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 459 A 459
+
Sbjct: 323 S 323
>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580,
chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2
SV=1
Length = 711
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 188 YSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMV 247
Y++ +KS +F LIE++ EM G+E +TY+TII + + + F M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 248 ESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMY 307
++G PD T ++++ Y SG +E++ Y G K D ++L K +G AG Y
Sbjct: 249 KTG-LMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDY 307
Query: 308 DKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSL 367
D +R V+ M+ P VV YN ++E G+AG F +M G+ PN T +L
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Query: 368 VSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKER-H 426
V Y KA + +++ +D +N +++ G E+ LF MKE
Sbjct: 368 VKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ 427
Query: 427 CVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
C PDN ++ M+ Y + G E A L +M+
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEML 459
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 164/358 (45%), Gaps = 48/358 (13%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T++ ++ +C +A FE M GL P Y+A++ Y +SG ++E S + +
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLS-LYER 281
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ KPD +S+L K + +D I +L EM + ++ + V YNT+++ G+A K
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
S F+ M+E+ G P+ TL +++ YG + +W + +Q
Sbjct: 342 PGLARSLFNEMLEA-GLTPNEKTLTALVKIYGKA-------RW--------ARDALQ--- 382
Query: 296 ILTKSYGRAGMYDKMRS---VMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKM 352
++++M++ MDF + YN ++ G E+ E F M
Sbjct: 383 ----------LWEEMKAKKWPMDF----------ILYNTLLNMCADIGLEEEAERLFNDM 422
Query: 353 KHR-GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGD 411
K +P++ +Y ++++ Y G K + ++ + V ++ C++ G+A
Sbjct: 423 KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKR 482
Query: 412 VEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSGKKLI 469
++ + +F +R PD+ ++ + + + E++++ E K++A E + KKL+
Sbjct: 483 IDDVVYVFDLSIKRGVKPDDRLCGCLL---SVMALCESSEDAE-KVMACLERANKKLV 536
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 143/345 (41%), Gaps = 45/345 (13%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T++ ++ + K + E+ L+E ++ G KP ++ L +G++G D + +M
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKA-- 233
KS+ D KP+V Y+ L+++ + + L + EM G+ + T ++ YGKA
Sbjct: 318 KSM-DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARW 376
Query: 234 -------------KKF--------------------EEMESSFSAMVESGGCHPDIFTLN 260
KK+ EE E F+ M ES C PD F+
Sbjct: 377 ARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYT 436
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
+M++ YG+ G EK + + E GV+ ++ L + G+A D + V D KR
Sbjct: 437 AMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKR 496
Query: 321 FFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKV 380
P ++ E E+ ++ K +T+ +L+ +K
Sbjct: 497 GVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKK--LVTFVNLIVDEKTEYETVKE 554
Query: 381 DSILRQVENSDVILDTPFFNCII------SAYGQAGDVEKMGELF 419
+ L + + V PF NC+I + + +A ++ +G LF
Sbjct: 555 EFKL-VINATQVEARRPFCNCLIDICRGNNRHERAHELLYLGTLF 598
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%)
Query: 286 GVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKM 345
GV+ D T + + R +Y+K + M K P VTY+ +++ + K+G +E++
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 346 EEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISA 405
+++ G KP++I + L + +AG + +L+++++ DV + +N ++ A
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 406 YGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMK 461
G+AG LF M E P+ T +++ Y A L +M A K
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKK 391
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/155 (18%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 307 YDKMRSVMDFMQKRFFFP-TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYC 365
+ K + ++++ + FP + YN+ +++ + +EE +M G++ ++ITY
Sbjct: 166 WQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYS 225
Query: 366 SLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKER 425
++++ + L K ++ + ++ D ++ I+ Y ++G VE++ L+
Sbjct: 226 TIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVAT 285
Query: 426 HCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
PD I F+ + + + G + + + +M +M
Sbjct: 286 GWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM 320
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 153/320 (47%), Gaps = 2/320 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ L+ L + AS L M+ + P+V ++AL+ A+ + G L EA ++M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
S PD++TYS LI R D + + M + VTYNT+I G+ KAK+
Sbjct: 353 IKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+E F M + G + T ++I + + + + + + GV DI T +
Sbjct: 412 VDEGMELFREMSQRG-LVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
IL G + V +++Q+ P + TYNI+IE KAG +E + F + +
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+KPN +TY +++S + + GL + D++ R+++ + D+ +N +I A+ + GD
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 416 GELFLTMKERHCVPDNITFA 435
EL M+ V D T
Sbjct: 591 AELIREMRSCRFVGDASTIG 610
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 161/347 (46%), Gaps = 2/347 (0%)
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
+ YQ TF L+ L + + +A L + M+ G +P + Y +V+ + G +D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 167 EAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTI 226
A S + M+ +P V Y+ +I + + + + EM GI + VTYN++
Sbjct: 239 LALSLLKKMEQ-GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 227 IDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMG 286
I ++ + S M+E +P++ T +++I A+ G + + EK Y+E
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ DI T + L + D+ + + + M + FP VVTYN +I+ F KA +++
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
E F++M RG+ N++TY +L+ + +A + +Q+ + V+ D ++ ++
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNL 453
G VE +F ++ PD T+ MI+ G E +L
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 165/375 (44%), Gaps = 3/375 (0%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
L K K+ L + + G Q T++ L+ + Q A + M+ G
Sbjct: 88 LSAIAKMNKFDLVISL-GEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+P + +L++ + + +A S + M + +PD +T++ LI + +R
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEA 205
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
++ M G + VTY +++G K + S M E G P + N++I
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIID 264
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
A N N+ + E + G++ ++ T N L + G + ++ M +R P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
VVT++ +I+ F K G + + E+ + +M R + P+ TY SL++ + + + +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNAL 444
+ + D + +N +I + +A V++ ELF M +R V + +T+ T+I +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 444
Query: 445 GMTEAAQNLENKMIA 459
+ AQ + +M++
Sbjct: 445 RECDNAQIVFKQMVS 459
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 2/294 (0%)
Query: 165 LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYN 224
LD+A + DM S P + +S L+ + K ++FDL+ + +M LGI + TY+
Sbjct: 62 LDDAVNLFGDMVK-SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 225 TIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
+I+ + + + + + M++ G PDI TLNS+++ + + I +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKL-GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 285 MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEK 344
MG + D T N L R + +++D M + P +VTY IV+ K G I+
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 345 MEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIIS 404
KKM+ ++P + Y +++ A + ++ +++N + + +N +I
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 405 AYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
G L M ER P+ +TF+ +I A+ G A+ L ++MI
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 97/264 (36%), Gaps = 36/264 (13%)
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
K ++ + F MV+S P I + ++SA + + + +G+ ++ T
Sbjct: 61 KLDDAVNLFGDMVKSRP-FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
+IL + R +V+ M K + P +VT N ++ F I +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 355 RGMKPNSITYCSL-----------------------------------VSAYSKAGLIMK 379
G +P+S T+ +L V+ K G I
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 380 VDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQ 439
S+L+++E + +N II A +V LF M + P+ +T+ ++I+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 440 AYNALGMTEAAQNLENKMIAMKEN 463
G A L + MI K N
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKIN 323
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 172/393 (43%), Gaps = 40/393 (10%)
Query: 107 QQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLD 166
+ YQ TFT L+ L + + +A L E M+ G +P + Y A+++ + G D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 167 EAFSTINDM----------------------KSVSDC------------KPDVYTYSILI 192
A + +N M + V D +PDV+TYS LI
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 193 KSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGC 252
+ R+ ++L++M I + VT+N++ID + K K E E F M++
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS-I 341
Query: 253 HPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG-MYDKMR 311
P+I T NS+I+ + +++ ++ + D+ T N L + +A + D M
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 312 SVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAY 371
D M +R VTY +I F +A + + FK+M G+ PN +TY +L+
Sbjct: 402 LFRD-MSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 372 SKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDN 431
K G + K + ++ S + D +N + +AG VE +LF ++ + PD
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 432 ITFATMIQAYNALGMTEAAQNLENKMIAMKENS 464
I + TMI + G+ E A L I MKE+
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTL---FIKMKEDG 550
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 177/368 (48%), Gaps = 3/368 (0%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
K+ + LAL + + + + +A ++ ++ L K + + A LF M + G++P V
Sbjct: 217 KRGEPDLALNLLNKMEKGKI-EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
Y++L+S G +A ++DM P+V T++ LI + K + EK+
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLE-RKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
EM I+ + VTYN++I+G+ + +E + F+ MV S C PD+ T N++I+ + +
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV-SKDCLPDVVTYNTLINGFCKA 393
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
+ + + + + G+ + T L + +A D + V M P ++TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +++ K G +EK F+ ++ M+P+ TY + KAG + + +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
V D +N +IS + + G E+ LF+ MKE +PD+ T+ T+I+A+ G A
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 450 AQNLENKM 457
+ L +M
Sbjct: 574 SAELIKEM 581
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 162/370 (43%), Gaps = 38/370 (10%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
++ + AL I G + + Y T L+ + +A L + M+ G +P
Sbjct: 112 RRSQLSFALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
+T LV Q EA + + M V C+PD+ TY +I K DL +L
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLN 229
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
+M IE V Y+T+ID K + ++ + F+ M ++ G PD+FT +S+IS N
Sbjct: 230 KMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNY 288
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
G +W D R + D ++++ P VVT+
Sbjct: 289 G------RWS----------------------------DASRLLSDMLERKIN-PNVVTF 313
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
N +I+ F K G + + E+ F +M R + PN +TY SL++ + + + I + +
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
D + D +N +I+ + +A V ELF M R V + +T+ T+I + +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 450 AQNLENKMIA 459
AQ + +M++
Sbjct: 434 AQMVFKQMVS 443
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 118/299 (39%), Gaps = 37/299 (12%)
Query: 165 LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYN 224
LDEA +M S P + +S L+ + K +FDL+ +M LG+ + TYN
Sbjct: 46 LDEAVDLFGEMVK-SRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 225 TIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
+I+ + + + M++ G P I TLNS+++ + + I + ++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 285 MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEK 344
MG + P VT+ ++ + +
Sbjct: 164 MGYQ-----------------------------------PDTVTFTTLVHGLFQHNKASE 188
Query: 345 MEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIIS 404
++M +G +P+ +TY ++++ K G ++L ++E + D ++ +I
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 405 AYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKEN 463
+ + V+ LF M + PD T++++I G A L + M+ K N
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 116/321 (36%), Gaps = 72/321 (22%)
Query: 93 KWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVY 152
+W A ++ + +++ TF L+ K + +A LF+ M+ + P++ Y
Sbjct: 290 RWSDASRLLSDMLERKI-NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 153 TALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKS------------------ 194
+L++ + LDEA M S DC PDV TY+ LI
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVS-KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMS 407
Query: 195 -----------CTKFHRF------DLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFE 237
T H F D + + +M G+ + +TYNT++DG K K E
Sbjct: 408 RRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 467
Query: 238 EMESSF------------------------SAMVESG----------GCHPDIFTLNSMI 263
+ F + VE G G PD+ N+MI
Sbjct: 468 KAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMI 527
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
S + G E+ + + G D T N L +++ R G ++ M+ F
Sbjct: 528 SGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFA 587
Query: 324 PTVVTYNIVIETFGKAGHIEK 344
TY +V + G ++K
Sbjct: 588 GDASTYGLVTDML-HDGRLDK 607
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 163/339 (48%), Gaps = 3/339 (0%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K K AL +F + + + T++ L+ L + AS L M+
Sbjct: 265 IDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P+V ++AL+ A+ + G L EA ++M S PD++TYS LI R D
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEA 382
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
+ + M + VTY+T+I G+ KAK+ EE F M + G + T ++I
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG-LVGNTVTYTTLIH 441
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ + + + + + + +GV +I T NIL + G K V +++Q+ P
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 501
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
+ TYNI+IE KAG +E E F + +G+ PN I Y +++S + + G + DS+L
Sbjct: 502 DIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMK 423
++++ + ++ +N +I A + GD E EL M+
Sbjct: 562 KKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 177/437 (40%), Gaps = 73/437 (16%)
Query: 92 KKWQLALKIFGLLRQQQW-YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVD 150
++ QL+L + L + + Y+ T + L+ K+ A L + M+ G KP
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAE 210
+T L+ EA + ++ M C+PD+ TY ++ K DL +L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 211 MSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS------ 264
M IE V YNTIIDG K K ++ + F+ M ++ G PD+FT +S+IS
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYG 307
Query: 265 -----------------------------AYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
A+ G + + EK Y+E + DI T +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L + D+ + + + M + FP VVTY+ +I+ F KA +E+ E F++M R
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 356 GM-----------------------------------KPNSITYCSLVSAYSKAGLIMKV 380
G+ PN +TY L+ K G + K
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 381 DSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQA 440
+ ++ S + D +N +I +AG VE ELF + + P+ I + TMI
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 441 YNALGMTEAAQNLENKM 457
+ G E A +L KM
Sbjct: 548 FCRKGSKEEADSLLKKM 564
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 3/368 (0%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
K+ LAL + + + + +A + ++ L K K + A LF M + G++P V
Sbjct: 235 KRGDIDLALSLLKKMEKGK-IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILA 209
Y++L+S G +A ++DM P+V T+S LI + K + EK+
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 210 EMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNS 269
EM I+ TY+++I+G+ + +E + F M+ S C P++ T +++I + +
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYSTLIKGFCKA 411
Query: 270 GNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTY 329
+E+ + + E + G+ + T L + +A D + V M P ++TY
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 330 NIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN 389
NI+++ K G + K F+ ++ M+P+ TY ++ KAG + + +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 390 SDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEA 449
V + +N +IS + + G E+ L MKE +P++ T+ T+I+A G EA
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 450 AQNLENKM 457
+ L +M
Sbjct: 592 SAELIKEM 599
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TF+ L+ K + +A L++ M+ + P + Y++L++ + LDEA M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
S DC P+V TYS LIK K R + ++ EMS G+ + VTY T+I G+ +A+
Sbjct: 390 IS-KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 448
Query: 236 FEEMESSFSAMVESGGCHP-----------------------------------DIFTLN 260
+ + F MV S G HP DI+T N
Sbjct: 449 CDNAQMVFKQMV-SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 507
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
MI +G +E + + +L GV ++ N + + R G ++ S++ M++
Sbjct: 508 IMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 321 FFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSIT 363
P TYN +I + G E E K+M+ G ++ T
Sbjct: 568 GPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 1/245 (0%)
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
S V +N ++ K KFE + S +++ G D++T + I+ + +
Sbjct: 82 SIVEFNKLLSAVAKMNKFE-LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ +G + DI TL+ L Y + +++D M + + P T+ +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+ +M RG +P+ +TY ++V+ K G I S+L+++E + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
+N II + ++ LF M + PD T++++I G A L + MI
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 459 AMKEN 463
K N
Sbjct: 321 ERKIN 325
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 155/354 (43%), Gaps = 38/354 (10%)
Query: 140 MLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFH 199
M++ G +P+V +YT L+ + Q+ +A + +MK PD++ Y+ LI +K
Sbjct: 443 MIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAK 501
Query: 200 RFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTL 259
R D L EM G++ +A TY I GY +A +F + M E G P+
Sbjct: 502 RMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG-VLPNKVLC 560
Query: 260 NSMISAYGNSGNI-----------------------------------EKMEKWYNEFNL 284
+I+ Y G + + E+ + E
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 285 MGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEK 344
G+ D+ + +L + + G K S+ D M + P V+ YN+++ F ++G IEK
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 345 MEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIIS 404
+E +M +G+ PN++TYC+++ Y K+G + + + +++ ++ D+ + ++
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 405 AYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
+ DVE+ +F T K + C F +I G TE + N+++
Sbjct: 741 GCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 166/356 (46%), Gaps = 12/356 (3%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
+T+T LM L K + + A +F M G+ P V Y L++ + + G + +A S ++
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
M P+V Y++L+ + + +++L EMS G+ +AVTY TIIDGY K+
Sbjct: 653 MVE-EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
E F M + G PD F +++ ++E+ + N G +
Sbjct: 712 DLAEAFRLFDEM-KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPF 769
Query: 295 NILTK---SYGRAGM-YDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFK 350
N L +G+ + + + +MD RF P VTYNI+I+ K G++E +E F
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 351 KMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAG 410
+M++ + P ITY SL++ Y K G ++ + + + + D ++ II+A+ + G
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 411 DVEKMGELFLTMKERHCVPDNI-----TFATMIQAYNALGMTEAAQNLENKMIAMK 461
K L M ++ V D T ++ + +G E A+ + M+ ++
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 150/344 (43%), Gaps = 2/344 (0%)
Query: 115 QTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTIND 174
T++ L+ L K + + A L M+S G+ +Y + + G++++A + +
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 175 MKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAK 234
M + S P Y+ LI+ + ++L EM I S TY T++ G +
Sbjct: 373 MIA-SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 235 KFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTL 294
+ + M+ SG C P++ ++I + + + E G+ DI
Sbjct: 432 DLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 295 NILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH 354
N L +A D+ RS + M + P TY I + +A ++Y K+M+
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 355 RGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEK 414
G+ PN + L++ Y K G +++ S R + + ++ D + +++ + V+
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 415 MGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
E+F M+ + PD ++ +I ++ LG + A ++ ++M+
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 7/262 (2%)
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P YTY +LI K R + + +L EM LG+ TY+ +IDG K + + +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
MV S G + + + I G +EK + ++ G+ Q L + Y
Sbjct: 335 VHEMV-SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSI 362
R + ++ M+KR + TY V++ +G ++ K+M G +PN +
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 363 TYCSLVSAY---SKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELF 419
Y +L+ + S+ G M+V L++++ + D +N +I +A +++
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRV---LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 420 LTMKERHCVPDNITFATMIQAY 441
+ M E P+ T+ I Y
Sbjct: 511 VEMVENGLKPNAFTYGAFISGY 532
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 47/294 (15%)
Query: 121 MVMLGKCK--QPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSV 178
M++ G C+ + E+A L + M GL P+ Y ++ Y +SG L EAF ++MK +
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK-L 725
Query: 179 SDCKPDVYTYSILIKSCT----------------------------------KFHRFDLI 204
PD + Y+ L+ C KF + +L
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 205 EKILAEMSYLGIE----CSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLN 260
++L + + + VTYN +ID K E + F M ++ P + T
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYT 844
Query: 261 SMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKR 320
S+++ Y G +M ++E G++ D +++ ++ + GM K ++D M +
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Query: 321 FFFP-----TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVS 369
++ T ++ F K G +E E+ + M P+S T L++
Sbjct: 905 NAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 222 TYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNE 281
TY+ +IDG K K+ E+ +S M +S G D T + +I N + + +E
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEM-DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 282 FNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGH 341
G+ + + G+ +K +++ D M P Y +IE + + +
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 342 IEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNC 401
+ + E +MK R + + TY ++V +G + +I++++ S + +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 402 IISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENK--MIA 459
+I + Q + MKE+ PD + ++I +G+++A + E + ++
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI-----IGLSKAKRMDEARSFLVE 512
Query: 460 MKENSGK 466
M EN K
Sbjct: 513 MVENGLK 519
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 197/438 (44%), Gaps = 18/438 (4%)
Query: 26 FRIQAIKRSPGPIQELGIQKEAEKDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEAL 85
FR+ AI +P ++ L K + +LR + I N++ +L L
Sbjct: 118 FRVDAIAFTP-LLKGLCADKRTSDAMDIVLRRMTELGCI---------PNVFSYNIL--L 165
Query: 86 DEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQ--PEQASLLFEVMLSD 143
+ + Q AL++ ++ + + + V+ G K+ ++A + ML
Sbjct: 166 KGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDR 225
Query: 144 GLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTY-SILIKSCTKFHRFD 202
G+ P V Y ++++A ++ +D+A +N M + PD TY SIL C+ +
Sbjct: 226 GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK-NGVMPDCMTYNSILHGYCSSGQPKE 284
Query: 203 LIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSM 262
I L +M G+E VTY+ ++D K + E F +M + G P+I T ++
Sbjct: 285 AI-GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG-LKPEITTYGTL 342
Query: 263 ISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFF 322
+ Y G + +M + G+ D +IL +Y + G D+ V M+++
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 323 FPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDS 382
P VTY VI K+G +E YF++M G+ P +I Y SL+ + +
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 383 ILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYN 442
++ ++ + + L+T FFN II ++ + G V + +LF M P+ IT+ T+I Y
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 443 ALGMTEAAQNLENKMIAM 460
G + A L + M+++
Sbjct: 523 LAGKMDEAMKLLSGMVSV 540
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 157/350 (44%), Gaps = 6/350 (1%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T+ ++ L K + ++A + M+ +G+ P Y +++ Y SG EA + M
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+S +PDV TYS+L+ K R KI M+ G++ TY T++ GY
Sbjct: 293 RS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
EM MV +G HPD + + +I AY G +++ +++ G+ + T
Sbjct: 352 LVEMHGLLDLMVRNG-IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ ++G + + M P + YN +I E+ EE +M R
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+ N+I + S++ ++ K G +++ + + + V + +N +I+ Y AG +++
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENSG 465
+L M P+ +T++T+I Y + E A L +M E+SG
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM----ESSG 576
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 141/309 (45%), Gaps = 2/309 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
T++ LM L K + +A +F+ M GLKP + Y L+ Y G L E + D+
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL-DL 361
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ PD Y +SILI + K + D + ++M G+ +AVTY +I K+ +
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
E+ F M++ G P NS+I E+ E+ E G+ + N
Sbjct: 422 VEDAMLYFEQMIDEG-LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFN 480
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ S+ + G + + + M + P V+TYN +I + AG +++ + M
Sbjct: 481 SIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV 540
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+KPN++TY +L++ Y K + + +++E+S V D +N I+ Q
Sbjct: 541 GLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAA 600
Query: 416 GELFLTMKE 424
EL++ + E
Sbjct: 601 KELYVRITE 609
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 160/343 (46%), Gaps = 7/343 (2%)
Query: 122 VMLGKCKQPEQASLLFEVM---LSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSV 178
+++G C + + L F + + G + +T L+ +A + +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 179 SDCKPDVYTYSILIKS-CTKFHRFDLIE--KILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
C P+V++Y+IL+K C + + +E ++A+ G V+Y T+I+G+ K
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
++ S++ M++ G PD+ T NS+I+A + ++K + N GV D T N
Sbjct: 212 SDKAYSTYHEMLDR-GILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ Y +G + + M+ P VVTY+++++ K G + + F M R
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKR 330
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+KP TY +L+ Y+ G ++++ +L + + + D F+ +I AY + G V++
Sbjct: 331 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQA 390
Query: 416 GELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
+F M+++ P+ +T+ +I G E A +MI
Sbjct: 391 MLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 153/371 (41%), Gaps = 36/371 (9%)
Query: 90 KQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSV 149
KQ K A+ +F +RQQ T+ ++ +L K + E A L FE M+ +GL P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGL-NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 150 DVYTALVSAYGQSGLLDEAFSTINDMKSVSDC---------------------------- 181
VY +L+ + A I +M C
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 182 ------KPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
KP+V TY+ LI + D K+L+ M +G++ + VTY+T+I+GY K +
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
E+ F M ES G PDI T N ++ + ++ Y G + ++ T N
Sbjct: 562 MEDALVLFKEM-ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
I+ + + D + + T+NI+I+ K G ++ ++ F
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G+ PN TY + GL+ ++D + +E++ +D+ N I+ Q G++ +
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Query: 416 GELFLTMKERH 426
G + E+H
Sbjct: 741 GTYLSMIDEKH 751
Score = 102 bits (255), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 143/319 (44%), Gaps = 4/319 (1%)
Query: 142 SDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKS-CTKFHR 200
+D + P + Y L+ ++G LD F+ + ++ + D ++ L+K C
Sbjct: 80 ADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIK-KGFRVDAIAFTPLLKGLCADKRT 138
Query: 201 FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVE--SGGCHPDIFT 258
D ++ +L M+ LG + +YN ++ G + +E M + GG PD+ +
Sbjct: 139 SDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVS 198
Query: 259 LNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQ 318
++I+ + G+ +K Y+E G+ D+ T N + + +A DK V++ M
Sbjct: 199 YTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMV 258
Query: 319 KRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIM 378
K P +TYN ++ + +G ++ + KKM+ G++P+ +TY L+ K G M
Sbjct: 259 KNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCM 318
Query: 379 KVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMI 438
+ I + + + + ++ Y G + +M L M PD+ F+ +I
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 439 QAYNALGMTEAAQNLENKM 457
AY G + A + +KM
Sbjct: 379 CAYAKQGKVDQAMLVFSKM 397
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 158/352 (44%), Gaps = 11/352 (3%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
F+ L+ K + +QA L+F M GL P+ Y A++ +SG +++A M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
P Y+ LI ++++ E+++ EM GI + + +N+IID + K +
Sbjct: 433 ID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
E E F MV G P++ T N++I+ Y +G +++ K + +G+K + T +
Sbjct: 492 VIESEKLFELMVRIG-VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYS 550
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L Y + + + M+ P ++TYNI+++ + +E + ++
Sbjct: 551 TLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVEN---SDVILDTPFFNCIISAYGQAGDV 412
G + TY ++ K L D L+ +N D+ L+ FN +I A + G
Sbjct: 611 GTQIELSTYNIILHGLCKNKL---TDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRN 667
Query: 413 EKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAMKENS 464
++ +LF+ VP+ T+ M + G+ E L+ ++M++N
Sbjct: 668 DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE---ELDQLFLSMEDNG 716
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 13/300 (4%)
Query: 168 AFSTINDMK--SVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNT 225
A S N M + PD+ TY ILI C + R DL L + G A+ +
Sbjct: 68 AVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTP 127
Query: 226 IIDGYGKAKKFEE-MESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
++ G K+ + M+ M E G C P++F+ N ++ + + ++ ++
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDE---NRSQEALELLHM 183
Query: 285 M------GVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
M G D+ + + + + G DK S M R P VVTYN +I K
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
A ++K E M G+ P+ +TY S++ Y +G + L+++ + V D
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
++ ++ + G + ++F +M +R P+ T+ T++Q Y G L + M+
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 3/338 (0%)
Query: 122 VMLGKCK--QPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVS 179
V+ G CK +P+ A L M ++ V +Y ++ + +D+AF N M++
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET-K 279
Query: 180 DCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEM 239
KPDV+TY+ LI + R+ ++L++M I V +N +ID + K K E
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 240 ESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTK 299
E + MV+S C PD+ N++I + +E+ + + E + G+ + T L
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 300 SYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKP 359
+ +A D + V M P ++TYNI+++ G++E F+ M+ R MK
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 360 NSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELF 419
+ +TY +++ A KAG + + + V + + ++S + + G E+ LF
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 420 LTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
+ MKE +P++ T+ T+I+A G A+ L +M
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEM 557
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 38/313 (12%)
Query: 165 LDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYN 224
LD+A DM S P + +S L+ + K ++FDL+ + +M LGI + TY+
Sbjct: 56 LDDAIGLFGDMVK-SRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 225 TIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNL 284
I+ + + + + M++ G P I TLNS+++ + + I + ++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLG-YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 285 MGVKADIQTLNILTK----------------------------SYG-------RAGMYDK 309
MG + D T L +YG + G D
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 310 MRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVS 369
++++ M+K VV YN +I+ K H++ + F KM+ +G+KP+ TY L+S
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 370 AYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTM-KERHCV 428
G +L + ++ D FFN +I A+ + G + + +L+ M K +HC
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCF 353
Query: 429 PDNITFATMIQAY 441
PD + + T+I+ +
Sbjct: 354 PDVVAYNTLIKGF 366
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 151/348 (43%), Gaps = 37/348 (10%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
Y+ + ++ L K KQ + A L M DG+ P V Y +L+S SG +A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
++ M + PDV+T++ LI +C K R E+ EM ++ VTY+ +I G
Sbjct: 242 RMVSCMTK-REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
+ +E E F MV S GC PD+ T + +I+ Y S +E K + E
Sbjct: 301 LCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE-------- 351
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
M +R VTY I+I+ + +AG + EE F
Sbjct: 352 ---------------------------MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIF 384
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQA 409
++M G+ PN ITY L+ G I K IL ++ + + D +N II +A
Sbjct: 385 RRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Query: 410 GDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
G+V +++ ++ + +PD T+ TM+ G+ A L KM
Sbjct: 445 GEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 93 KWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVY 152
+W A ++ + +++ Y TF L+ K + +A +E M+ L P + Y
Sbjct: 236 RWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 153 TALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMS 212
+ L+ LDEA M S C PDV TYSILI K + + K+ EMS
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVS-KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 213 YLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNI 272
G+ + VTY +I GY +A K E F MV G HP+I T N ++ ++G I
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG-VHPNIITYNVLLHGLCDNGKI 412
Query: 273 EKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIV 332
EK + G+ ADI T NI+ + +AG + + + P + TY +
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Query: 333 IETFGKAGHIEKMEEYFKKMKHRGMKPN 360
+ K G + + F+KMK G+ PN
Sbjct: 473 MLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 2/312 (0%)
Query: 147 PSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEK 206
PS+ ++ L+SA + D M+ + ++ T +IL+ + + L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG-IPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 207 ILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAY 266
L +M LG E S VT+ ++++G+ + + + F MV G P++ N++I
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGL 196
Query: 267 GNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTV 326
S ++ N G+ D+ T N L +G + ++ M KR +P V
Sbjct: 197 CKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 327 VTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQ 386
T+N +I+ K G + + EE++++M R + P+ +TY L+ + + + +
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 387 VENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGM 446
+ + D ++ +I+ Y ++ VE +LF M +R V + +T+ +IQ Y G
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 447 TEAAQNLENKMI 458
A+ + +M+
Sbjct: 377 LNVAEEIFRRMV 388
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 112/277 (40%), Gaps = 36/277 (12%)
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P + +S L+ + +K ++D++ + +M LGI + T N +++ + + + S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
M++ G P I T S+++ + + +++ MG K
Sbjct: 139 LGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYK-------------- 183
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSI 362
P VV YN +I+ K+ ++ + +M+ G+ P+ +
Sbjct: 184 ---------------------PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVV 222
Query: 363 TYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTM 422
TY SL+S +G ++ + ++ D FN +I A + G V + E + M
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 423 KERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
R PD +T++ +I + A+ + M++
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 14/232 (6%)
Query: 235 KFEEMESSFSAMVESGGCHP--DIFTLNSMISAYGNSGNIEKMEKW------YNEFNLMG 286
+F +++ S C P I + ++SA I KM+K+ + + ++G
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSA------ISKMKKYDVVIYLWEQMQMLG 111
Query: 287 VKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKME 346
+ ++ T NIL + R S + M K P++VT+ ++ F + +
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 347 EYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAY 406
F +M G KPN + Y +++ K+ + +L ++E + D +N +IS
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 407 GQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
+G + M +R PD TF +I A G A+ +MI
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 177/383 (46%), Gaps = 40/383 (10%)
Query: 110 YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAF 169
Y+ TFT L+ L + +A L + M+ G +P + Y +V+ + G +D A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 170 STINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDG 229
+ +N M++ + K +V ++ +I S K+ ++ + EM GI + VTYN++I+
Sbjct: 244 NLLNKMEA-ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 230 YGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKA 289
++ + S M+E +P++ T N++I A+ G + + EK + E +
Sbjct: 303 LCNYGRWSDASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 290 DIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYF 349
D T N+L + D+ + + FM + P + TYN +I F K +E E F
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Query: 350 KKMKHRGMKPNSITYCSLVSAYSKAG-------------------LIM------------ 378
++M RG+ N++TY +++ + +AG IM
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481
Query: 379 -KVDS---ILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITF 434
K+D+ I + ++ S++ L+ +N +I +AG V + +LF ++ + PD +T+
Sbjct: 482 GKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTY 538
Query: 435 ATMIQAYNALGMTEAAQNLENKM 457
TMI + + + A +L KM
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKM 561
Score = 115 bits (288), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 166/369 (44%), Gaps = 38/369 (10%)
Query: 92 KKWQLALKIFGLLRQQQW-YQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVD 150
++ QL+L + L + + Y+ T + L+ K+ A L + M+ G KP
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 151 VYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAE 210
+T L+ EA + ++ M C+PD+ TY ++ K DL +L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 211 MSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSG 270
M I+ + V +NTIID K + E F+ M E+ G P++ T NS+I+ N G
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYG 307
Query: 271 NIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYN 330
+W + L+ N+L K P VVT+N
Sbjct: 308 ------RWSDASRLLS--------NMLEKKIN---------------------PNVVTFN 332
Query: 331 IVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENS 390
+I+ F K G + + E+ ++M R + P++ITY L++ + + + + + + +
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 391 DVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAA 450
D + + +N +I+ + + VE ELF M +R V + +T+ T+IQ + G ++A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 451 QNLENKMIA 459
Q + +M++
Sbjct: 453 QMVFKQMVS 461
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 156/351 (44%), Gaps = 6/351 (1%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D K + ++A+ +F + + + + T+ L+ L + AS L ML
Sbjct: 265 IDSLCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLI 204
+ P+V + AL+ A+ + G L EA +M S PD TY++LI +R D
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTITYNLLINGFCMHNRLDEA 382
Query: 205 EKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMIS 264
+++ M + TYNT+I+G+ K K+ E+ F M + G + T ++I
Sbjct: 383 KQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTV-TYTTIIQ 441
Query: 265 AYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFP 324
+ +G+ + + + + V DI T +IL G D + ++QK
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL 501
Query: 325 TVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSIL 384
+ YN +IE KAG + + + F + +KP+ +TY +++S L+ + D +
Sbjct: 502 NIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 385 RQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
R+++ + ++ +N +I A + D EL M+ V D T +
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 1/245 (0%)
Query: 219 SAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKW 278
S V +N ++ K KFE + S +++ G D++T + I+ + +
Sbjct: 82 SIVEFNKLLSAVAKMNKFE-LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 279 YNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGK 338
+ +G + DI TL+ L Y + +++D M + + P T+ +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 339 AGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPF 398
+ +M RG +P+ +TY ++V+ K G I ++L ++E + + +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 399 FNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMI 458
FN II + + VE +LF M+ + P+ +T+ ++I G A L + M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 459 AMKEN 463
K N
Sbjct: 321 EKKIN 325
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 165/371 (44%), Gaps = 8/371 (2%)
Query: 92 KKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDV 151
K+ L +K GL+ + Y + KL G K+ Q + E+M + P +
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKL----GSLKEAFQ---IVELMKQTNVLPDLCT 312
Query: 152 YTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEM 211
Y L++ +G + E ++ MKS+ +PDV TY+ LI C + K++ +M
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLK-LQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 212 SYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGN 271
G++ + VT+N + K +K E + +V+ G PDI T +++I AY G+
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 272 IEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNI 331
+ + E G+K + TLN + + + D+ ++++ KR F VTY
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGT 491
Query: 332 VIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSD 391
+I F + +EK E + +MK + P T+ SL+ G ++ S
Sbjct: 492 LIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESG 551
Query: 392 VILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQ 451
++ D FN II Y + G VEK E + + PDN T ++ GMTE A
Sbjct: 552 LLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKAL 611
Query: 452 NLENKMIAMKE 462
N N +I +E
Sbjct: 612 NFFNTLIEERE 622
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 174/367 (47%), Gaps = 16/367 (4%)
Query: 84 ALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASL-----LFE 138
AL + + K +AL+IF ++ + + T +++G + P S+ +F+
Sbjct: 137 ALSAYLHEGKPHVALQIF---QKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 139 VMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKF 198
M+ G+ +V + LV+ Y G L++A + M S PD TY+ ++K+ +K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKK 253
Query: 199 HRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFT 258
R ++++L +M G+ + VTYN ++ GY K +E M ++ PD+ T
Sbjct: 254 GRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT-NVLPDLCT 312
Query: 259 LNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQ 318
N +I+ N+G++ + + + + ++ D+ T N L G+ + R +M+ M+
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 319 KRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKH----RGMKPNSITYCSLVSAYSKA 374
VT+NI ++ K EK E +K+K G P+ +TY +L+ AY K
Sbjct: 373 NDGVKANQVTHNISLKWLCKE---EKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 375 GLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITF 434
G + ++R++ + ++T N I+ A + +++ L + +R + D +T+
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 435 ATMIQAY 441
T+I +
Sbjct: 490 GTLIMGF 496
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 139/315 (44%), Gaps = 5/315 (1%)
Query: 147 PSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKF-HRFDL-- 203
PS ++ +SAY G A M + KP++ T + L+ ++ F +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 204 IEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMI 263
++ +M +G+ + T+N +++GY K E+ MV +PD T N+++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 264 SAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFF 323
A G + +++ + G+ + T N L Y + G + +++ M++
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 324 PTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSI 383
P + TYNI+I AG + + E MK ++P+ +TY +L+ + GL ++ +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 384 LRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCV-PDNITFATMIQAYN 442
+ Q+EN V + N + + E + + + H PD +T+ T+I+AY
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 443 ALGMTEAAQNLENKM 457
+G A + +M
Sbjct: 428 KVGDLSGALEMMREM 442
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 144/329 (43%), Gaps = 41/329 (12%)
Query: 96 LALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASL---LFEVMLSDGLKPSVDVY 152
L+L+ L+ Q + + T + + CK+ ++ ++ + E++ G P + Y
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Query: 153 TALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMS 212
L+ AY + G L A + +M K + T + ++ + K + D +L
Sbjct: 420 HTLIKAYLKVGDLSGALEMMREMGQ-KGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 213 YLGIECSAVTYNTIIDGYGKAKKFE-------EME--------SSFSAMVESGGCH---- 253
G VTY T+I G+ + +K E EM+ S+F++++ G CH
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI-GGLCHHGKT 537
Query: 254 ----------------PDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNIL 297
PD T NS+I Y G +EK ++YNE K D T NIL
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 298 TKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGM 357
+ GM +K + + + + TV TYN +I F K +++ + +M+ +G+
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 358 KPNSITYCSLVSAYSKAGLIMKVDSILRQ 386
+P+ TY S +S + G + + D +L++
Sbjct: 657 EPDRFTYNSFISLLMEDGKLSETDELLKK 685
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 181/388 (46%), Gaps = 15/388 (3%)
Query: 74 KNLWPKPVLEALDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQA 133
K+L PK VL+ L +K + A +F + Y + ++ L + +
Sbjct: 6 KSLSPKHVLKLLKS---EKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 134 SLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIK 193
S + E++ S K DV +++ YG++ + D+A M+ + C+P + +Y+ L+
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 194 SCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCH 253
+ + ++ +E + A G+ + TYN +I K K+FE+ M + G
Sbjct: 123 AFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE-GFK 181
Query: 254 PDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSV 313
PD+F+ +++I+ +G ++ + ++E + GV D+ NIL + + + +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 314 MD-FMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYS 372
D ++ +P V T+NI+I K G ++ + +++MK + + TY SL+
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLC 301
Query: 373 KAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNI 432
AG + K +S+ +++ +D +N ++ + + G +++ EL+ M+ ++ V
Sbjct: 302 DAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVN--- 358
Query: 433 TFATMIQAYNAL--GMTEAAQNLENKMI 458
I +YN L G+ E + E MI
Sbjct: 359 -----IVSYNILIKGLLENGKIDEATMI 381
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 2/361 (0%)
Query: 97 ALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALV 156
AL +F +R+ + +++ L+ + KQ + LF + G+ P++ Y L+
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 157 SAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGI 216
+ ++A ++ M KPDV++YS +I K + D ++ EMS G+
Sbjct: 157 KMSCKKKEFEKARGFLDWMWK-EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 217 ECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKME 276
YN +IDG+ K K + + ++E +P++ T N MIS G ++
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 277 KWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETF 336
K + + D+ T + L AG DK SV + + +R VVTYN ++ F
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 337 GKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDT 396
+ G I++ E ++ M+H+ N ++Y L+ + G I + I R + D
Sbjct: 336 CRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 397 PFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENK 456
+ I G V K + ++ D +A++I E A NL +
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 457 M 457
M
Sbjct: 455 M 455
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 162/413 (39%), Gaps = 42/413 (10%)
Query: 85 LDEAIKQKKWQLALKIFGLLRQQQWYQARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDG 144
+D +K+K + A++++ L + +T ++ L KC + + ++E M +
Sbjct: 226 IDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNE 285
Query: 145 LKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKS---CTKFHRF 201
+ + Y++L+ +G +D+A S N++ DV TY+ ++ C K
Sbjct: 286 REKDLYTYSSLIHGLCDAGNVDKAESVFNELDE-RKASIDVVTYNTMLGGFCRCGKIKES 344
Query: 202 DLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAM--------------- 246
+ +I+ + + I V+YN +I G + K +E + M
Sbjct: 345 LELWRIMEHKNSVNI----VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIF 400
Query: 247 -------------------VESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGV 287
VES G H D++ S+I +E+ E + GV
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGV 460
Query: 288 KADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEE 347
+ + N L R + + M K PTVV+YNI+I KAG +
Sbjct: 461 ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASA 520
Query: 348 YFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYG 407
+ K+M G KP+ TY L+ + I + Q S + D N +I
Sbjct: 521 FVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLC 580
Query: 408 QAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIAM 460
G ++ + M+ R+C + +T+ T+++ + +G + A + M M
Sbjct: 581 SVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM 633
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 131 EQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSI 190
++A++++ +M + G Y + +G +++A + +++S S DVY Y+
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES-SGGHLDVYAYAS 434
Query: 191 LIKSCTKFHRFDLIEKILAEMSYLGIE-----CSA------------------------- 220
+I K R + ++ EMS G+E C+A
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 221 -----VTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKM 275
V+YN +I G KA KF E + M+E+G PD+ T + ++ I+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW-KPDLKTYSILLCGLCRDRKIDLA 553
Query: 276 EKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIET 335
+ +++F G++ D+ NIL G D +VM M+ R +VTYN ++E
Sbjct: 554 LELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEG 613
Query: 336 FGKAGHIEKMEEYFKKMKHRGMKPNSITY 364
F K G + + M G++P+ I+Y
Sbjct: 614 FFKVGDSNRATVIWGYMYKMGLQPDIISY 642
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 111/255 (43%), Gaps = 2/255 (0%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
+ ++ L K K+ E+AS L + M G++ + V AL+ + L EA + +M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+ C+P V +Y+ILI K +F + EM G + TY+ ++ G + +K
Sbjct: 491 GK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+ + ++SG D+ N +I + G ++ A++ T N
Sbjct: 550 IDLALELWHQFLQSG-LETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
L + + + G ++ + +M K P +++YN +++ + E+F ++
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNH 668
Query: 356 GMKPNSITYCSLVSA 370
G+ P T+ LV A
Sbjct: 669 GIFPTVYTWNILVRA 683
>sp|Q9SAD9|PPR40_ARATH Pentatricopeptide repeat-containing protein At1g13040,
mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2
SV=1
Length = 517
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 159/321 (49%), Gaps = 4/321 (1%)
Query: 137 FEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCT 196
F M+ G +P V YT L++ ++G + +A N M S PD + L+
Sbjct: 137 FFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR-SGVSPDNKACAALVVGLC 195
Query: 197 KFHRFDLIEKILAE-MSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPD 255
+ DL +++AE + ++ S V YN +I G+ KA + E+ E+ S M + G C PD
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG-CEPD 254
Query: 256 IFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMD 315
+ T N +++ Y ++ +++ E E G++ D + N L K + R DK + M
Sbjct: 255 LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 316 FMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAG 375
+ F VV+Y+ +IETF +A + K F++M+ +GM N +TY SL+ A+ + G
Sbjct: 315 KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREG 374
Query: 376 LIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
+L Q+ + D F+ I+ ++G+V+K +F M E PD I++
Sbjct: 375 NSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Query: 436 TMIQAYNALG-MTEAAQNLEN 455
++I G +TEA + E+
Sbjct: 435 SLISGLCRSGRVTEAIKLFED 455
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 152/323 (47%), Gaps = 7/323 (2%)
Query: 122 VMLGKCKQPEQASLLFEVML----SDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKS 177
+++G C + L +E++ S +K S VY AL+S + ++G +++A + + M
Sbjct: 190 LVVGLC-HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248
Query: 178 VSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFE 237
+ C+PD+ TY++L+ + E ++AEM GI+ A +YN ++ + + +
Sbjct: 249 IG-CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPD 307
Query: 238 EMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNIL 297
+ + +E G D+ + +++I + + N K + + E G+ ++ T L
Sbjct: 308 KCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSL 366
Query: 298 TKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGM 357
K++ R G + ++D M + P + Y +++ K+G+++K F M +
Sbjct: 367 IKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426
Query: 358 KPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGE 417
P++I+Y SL+S ++G + + + ++ + D F II + + +
Sbjct: 427 TPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYK 486
Query: 418 LFLTMKERHCVPDNITFATMIQA 440
++ M ++ D T+I+A
Sbjct: 487 VWDQMMDKGFTLDRDVSDTLIKA 509
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 132/308 (42%), Gaps = 38/308 (12%)
Query: 152 YTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEM 211
Y + ++ +SG++D A ++M+ S + + Y+ I + RF+L E I +M
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRH-SSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 212 SYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGN 271
+G TY+ I G K KKF+ +++ S M E+ G PDI+ N +
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDM-ETLGFIPDIWAFNVYLDLLCRENK 129
Query: 272 IEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNI 331
V +QT + + GR P VV+Y I
Sbjct: 130 ---------------VGFAVQTFFCMVQR-GRE-------------------PDVVSYTI 154
Query: 332 VIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLI-MKVDSILRQVENS 390
+I +AG + E + M G+ P++ +LV A + + + + +++++
Sbjct: 155 LINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSA 214
Query: 391 DVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQAYNALGMTEAA 450
V L T +N +IS + +AG +EK L M + C PD +T+ ++ Y M + A
Sbjct: 215 RVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRA 274
Query: 451 QNLENKMI 458
+ + +M+
Sbjct: 275 EGVMAEMV 282
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 4/274 (1%)
Query: 186 YTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSA 245
+TYS I K +FDLI+ +L++M LG +N +D + K +F
Sbjct: 80 FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC 139
Query: 246 MVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAG 305
MV+ G PD+ + +I+ +G + + +N GV D + L A
Sbjct: 140 MVQRGR-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 306 MYDKMRSVM--DFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSIT 363
D ++ + R TVV YN +I F KAG IEK E M G +P+ +T
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVV-YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVT 257
Query: 364 YCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMK 423
Y L++ Y ++ + + ++ ++ S + LD +N ++ + + +K +
Sbjct: 258 YNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 424 ERHCVPDNITFATMIQAYNALGMTEAAQNLENKM 457
E D ++++T+I+ + T A L +M
Sbjct: 318 EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 153/322 (47%), Gaps = 2/322 (0%)
Query: 136 LFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCKPDVYTYSILIKSC 195
LF M+ PS+ ++ ++S +S D S + M+ V D+Y+Y+I+I
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME-VCGIGHDLYSYNIVINCL 114
Query: 196 TKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESSFSAMVESGGCHPD 255
+ RF + ++ +M G E VT +++I+G+ + + + S M E G PD
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPD 173
Query: 256 IFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYGRAGMYDKMRSVMD 315
+ N++I G + + ++ GV+AD T N L +G + +M
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 316 FMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAG 375
M R P V+T+ VI+ F K G + + +++M R + P+ TY SL++ G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 376 LIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFA 435
+ + +L + + D +N +I+ + ++ V++ +LF M +R V D IT+
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 436 TMIQAYNALGMTEAAQNLENKM 457
T+IQ Y G +AAQ + ++M
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM 375
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 158/362 (43%), Gaps = 47/362 (12%)
Query: 112 ARCQTFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFST 171
RC F + ++GK M+ G +P V ++L++ + Q + +A
Sbjct: 115 CRCSRFVIALSVVGK-------------MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 172 INDMKSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYG 231
++ M+ + +PDV Y+ +I K + ++ M G+ AVTYN+++ G
Sbjct: 162 VSKMEEMG-FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 232 KAKKFEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADI 291
+ ++ + MV P++ T ++I + G + K Y E V D+
Sbjct: 221 CSGRWSDAARLMRDMVMRD-IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 292 QTLNILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKK 351
T N L G D+ + ++D M + P VVTYN +I F K+ +++ + F++
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 352 MKHRGMKPNSITYCSLVSAYSKAG-------LIMKVDS---------------------- 382
M RG+ ++ITY +++ Y +AG + ++DS
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 383 ---ILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTMKERHCVPDNITFATMIQ 439
+ ++ S++ LD +N +I + G+VE +LF ++ + PD +++ TMI
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 440 AY 441
+
Sbjct: 460 GF 461
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 36/303 (11%)
Query: 125 GKCK--QPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMKSVSDCK 182
G CK A LF+ M DG++ Y +LV+ SG +A + DM + D
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM-VMRDIV 241
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P+V T++ +I K +F K+ EM+ ++ TYN++I+G + +E +
Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 301
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
MV + GC PD+ T N++I+ + S +++ K + E G+ D T N + + Y
Sbjct: 302 LDLMV-TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 303 RAGMYDKMRSVMDFMQKRFFFPT--------------------------------VVTYN 330
+AG D + + M R T + TYN
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 331 IVIETFGKAGHIEKMEEYFKKMKHRGMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENS 390
IVI K G++E + F+ + +G+KP+ ++Y +++S + + K D + R+++
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 391 DVI 393
++
Sbjct: 481 GLL 483
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 146/323 (45%), Gaps = 7/323 (2%)
Query: 117 FTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDMK 176
F+K++ + K K + LF M G+ + Y +++ + A S + M
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 177 SVSDCKPDVYTYSILIKSCTKFHR-FDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
+PDV T S LI + +R FD I+ ++++M +G V YNTIIDG K
Sbjct: 132 KFG-YEPDVVTVSSLINGFCQGNRVFDAID-LVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+ F M E G D T NS+++ SG + + + + ++ T
Sbjct: 190 VNDAVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
+ + + G + + + + M +R P V TYN +I G +++ ++ M +
Sbjct: 249 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Query: 356 GMKPNSITYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKM 415
G P+ +TY +L++ + K+ + + + R++ ++ DT +N II Y QAG +
Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 416 GELFLTMKERHCVPDNITFATMI 438
E+F M R P+ T++ ++
Sbjct: 369 QEIFSRMDSR---PNIRTYSILL 388
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 5/244 (2%)
Query: 116 TFTKLMVMLGKCKQPEQASLLFEVMLSDGLKPSVDVYTALVSAYGQSGLLDEAFSTINDM 175
TFT ++ + K + +A L+E M + P V Y +L++ G +DEA + D+
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML-DL 304
Query: 176 KSVSDCKPDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKK 235
C PDV TY+ LI K R D K+ EM+ G+ +TYNTII GY +A +
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 236 FEEMESSFSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLN 295
+ + FS M P+I T + ++ + +EK + ++ DI T N
Sbjct: 365 PDAAQEIFSRM----DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 296 ILTKSYGRAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHR 355
I+ + G + + + + P VV+Y +I F + +K + ++KM+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 356 GMKP 359
G+ P
Sbjct: 481 GLLP 484
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 183 PDVYTYSILIKSCTKFHRFDLIEKILAEMSYLGIECSAVTYNTIIDGYGKAKKFEEMESS 242
P + +S ++ K +DL+ + M GI +YN +I+ + +F S
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 243 FSAMVESGGCHPDIFTLNSMISAYGNSGNIEKMEKWYNEFNLMGVKADIQTLNILTKSYG 302
M++ G PD+ T++S+I+ + + +++++K
Sbjct: 127 VGKMMKFGY-EPDVVTVSSLINGFCQGNRV------------------FDAIDLVSK--- 164
Query: 303 RAGMYDKMRSVMDFMQKRFFFPTVVTYNIVIETFGKAGHIEKMEEYFKKMKHRGMKPNSI 362
M++ F P VV YN +I+ K G + E F +M+ G++ +++
Sbjct: 165 --------------MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 363 TYCSLVSAYSKAGLIMKVDSILRQVENSDVILDTPFFNCIISAYGQAGDVEKMGELFLTM 422
TY SLV+ +G ++R + D++ + F +I + + G + +L+ M
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 423 KERHCVPDNITFATMIQAYNALGMTEAAQNLENKMIA 459
R PD T+ ++I G + A+ + + M+
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVT 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,488,938
Number of Sequences: 539616
Number of extensions: 6527254
Number of successful extensions: 27126
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 17836
Number of HSP's gapped (non-prelim): 2844
length of query: 471
length of database: 191,569,459
effective HSP length: 121
effective length of query: 350
effective length of database: 126,275,923
effective search space: 44196573050
effective search space used: 44196573050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)