Query         012112
Match_columns 471
No_of_seqs    377 out of 2826
Neff          7.7 
Searched_HMMs 13730
Date          Mon Mar 25 03:01:02 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012112.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012112hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1olta_ c.1.28.2 (A:) Oxygen-i 100.0 2.8E-79 2.1E-83  637.5  35.5  377   50-465    46-437 (441)
  2 d1r30a_ c.1.28.1 (A:) Biotin s  99.8 9.9E-19 7.2E-23  171.6  17.5  201   62-290    49-253 (312)
  3 d1tv8a_ c.1.28.3 (A:) Molybden  98.8 1.4E-07   1E-11   90.8  18.4  181   54-252    12-194 (327)
  4 d3ctaa1 a.4.5.28 (A:5-89) Ta10  94.2   0.055   4E-06   40.5   6.7   65  383-470    20-84  (85)
  5 d2etha1 a.4.5.28 (A:1-140) Put  92.5    0.16 1.2E-05   41.2   7.6   73  373-465    35-107 (140)
  6 d2hr3a1 a.4.5.28 (A:2-146) Pro  91.9    0.25 1.9E-05   40.2   8.1   73  374-466    38-111 (145)
  7 d1lj9a_ a.4.5.28 (A:) Transcri  91.7    0.19 1.4E-05   41.0   7.2   72  375-466    34-105 (144)
  8 d1hsja1 a.4.5.28 (A:373-487) S  91.2    0.27   2E-05   38.5   7.3   86  364-470    29-114 (115)
  9 d2fbia1 a.4.5.28 (A:5-140) Pro  91.0    0.18 1.3E-05   40.7   6.2   72  374-465    34-105 (136)
 10 d1jgsa_ a.4.5.28 (A:) Multiple  90.9     0.4 2.9E-05   38.6   8.3   76  365-463    32-107 (138)
 11 d1qwga_ c.1.27.1 (A:) (2r)-pho  90.8     1.2 8.7E-05   39.8  12.1  117  115-249    39-167 (251)
 12 d2a61a1 a.4.5.28 (A:5-143) Tra  90.7    0.24 1.8E-05   40.0   6.7   73  373-465    33-105 (139)
 13 d1lnwa_ a.4.5.28 (A:) MexR rep  90.6     0.4 2.9E-05   38.8   8.0   78  365-465    34-111 (141)
 14 d2frha1 a.4.5.28 (A:102-216) P  89.5    0.23 1.7E-05   39.0   5.4   66  384-469    49-114 (115)
 15 d1h4pa_ c.1.8.3 (A:) Exo-beta-  88.9    0.58 4.2E-05   45.0   9.0  119  160-290    73-217 (408)
 16 d2fbha1 a.4.5.28 (A:8-144) Tra  88.9    0.81 5.9E-05   36.4   8.6   65  382-466    41-105 (137)
 17 d3broa1 a.4.5.28 (A:3-137) Tra  88.2    0.81 5.9E-05   36.3   8.1   65  383-467    44-108 (135)
 18 d1i60a_ c.1.15.4 (A:) Hypothet  88.2    0.94 6.8E-05   40.4   9.5  119  163-298    17-143 (278)
 19 d3deua1 a.4.5.28 (A:2-141) Tra  88.1    0.71 5.2E-05   37.0   7.7   71  375-465    36-107 (140)
 20 d1p4xa2 a.4.5.28 (A:126-250) S  88.0     0.5 3.6E-05   37.6   6.5   70  380-469    45-114 (125)
 21 d1s3ja_ a.4.5.28 (A:) Putative  87.6    0.48 3.5E-05   38.2   6.4   71  374-464    39-109 (143)
 22 d1vjza_ c.1.8.3 (A:) Endogluca  87.1     1.2 8.7E-05   40.4   9.7  128  159-296    19-168 (325)
 23 d2bv6a1 a.4.5.28 (A:5-140) Tra  87.0    0.27   2E-05   39.5   4.4   70  373-462    37-106 (136)
 24 d2fxaa1 a.4.5.28 (A:6-167) Pro  86.7    0.49 3.6E-05   39.5   6.0   78  365-465    39-116 (162)
 25 d2pb1a1 c.1.8.3 (A:7-400) Exo-  86.4     1.3 9.7E-05   42.0   9.8  122  160-295    68-215 (394)
 26 d1x5wa2 g.37.1.1 (A:36-64) Zin  86.1   0.089 6.5E-06   30.1   0.5   11   64-74      2-12  (29)
 27 d2v7fa1 a.4.5.84 (A:2-150) Rib  86.0       2 0.00015   34.9   9.2   71  374-469    56-139 (149)
 28 d1ub9a_ a.4.5.28 (A:) Hypothet  85.8    0.92 6.7E-05   34.1   6.7   71  373-463    19-89  (100)
 29 d2p8ta1 a.4.5.72 (A:14-82) Hyp  83.8       2 0.00014   30.3   7.1   54  382-462    15-68  (69)
 30 d1ur4a_ c.1.8.3 (A:) Beta-1,4-  83.7     2.9 0.00021   39.3  10.9  132  161-302    39-194 (387)
 31 d1nvma2 c.1.10.5 (A:2-290) 4-h  83.7     1.6 0.00012   39.1   8.7   88  115-214   162-251 (289)
 32 d2q02a1 c.1.15.4 (A:1-271) Put  83.6       4 0.00029   35.9  11.3  127  151-298     7-139 (271)
 33 d1z91a1 a.4.5.28 (A:8-144) Org  82.3    0.37 2.7E-05   38.8   3.0   74  365-461    31-104 (137)
 34 d1p4xa1 a.4.5.28 (A:1-125) Sta  80.5     1.3 9.4E-05   34.9   5.8   63  383-465    49-111 (125)
 35 d1ceoa_ c.1.8.3 (A:) Endogluca  80.4       8 0.00059   35.1  12.5  113  161-292    29-164 (340)
 36 d1sr9a2 c.1.10.5 (A:61-370) 2-  78.8      13 0.00096   32.8  13.3  113  114-243   185-299 (310)
 37 d1wkya2 c.1.8.3 (A:34-330) Bet  78.8      20  0.0014   31.2  14.5  117  161-296    33-154 (297)
 38 d1r7ja_ a.4.5.49 (A:) Sso10a (  78.8     3.3 0.00024   30.7   7.3   52  383-461    17-68  (90)
 39 d1qpoa1 c.1.17.1 (A:117-285) Q  77.1     1.2 8.4E-05   37.4   4.6   61  114-185    99-159 (169)
 40 d1h1na_ c.1.8.3 (A:) Endocellu  76.8      24  0.0017   31.3  14.5  114  161-292    32-157 (305)
 41 d1tvna1 c.1.8.3 (A:1-293) Endo  73.9     5.4 0.00039   35.5   8.9  122  160-296    38-164 (293)
 42 d2fbka1 a.4.5.28 (A:8-179) Tra  73.9     1.5 0.00011   36.5   4.6   78  365-465    60-140 (172)
 43 d1e0ta2 c.1.12.1 (A:1-69,A:168  73.8      10 0.00073   33.3  10.4   85  151-249     5-93  (246)
 44 d1rqba2 c.1.10.5 (A:4-306) Tra  73.3     3.5 0.00025   37.1   7.4   88  115-214   175-264 (303)
 45 d2g0wa1 c.1.15.4 (A:10-284) Hy  72.3      12 0.00087   32.4  10.9   80  163-249    18-103 (275)
 46 d1egza_ c.1.8.3 (A:) Endogluca  71.7     5.3 0.00039   35.6   8.3  120  160-296    38-162 (291)
 47 d1mkma1 a.4.5.33 (A:1-75) Tran  70.6      12  0.0009   26.0   8.5   59  381-465    17-75  (75)
 48 d1edga_ c.1.8.3 (A:) Endogluca  70.0     2.8 0.00021   39.1   6.1  125  156-294    58-213 (380)
 49 d1hjsa_ c.1.8.3 (A:) Beta-1,4-  69.2     6.7 0.00049   35.1   8.5  120  162-293    29-169 (332)
 50 d1qapa1 c.1.17.1 (A:130-296) Q  69.0     1.6 0.00012   36.5   3.5   53  115-181   100-152 (167)
 51 d1twda_ c.1.30.1 (A:) Copper h  68.3     4.3 0.00031   35.9   6.5  106  117-248    29-145 (247)
 52 d1x7fa2 c.1.8.12 (A:1-244) Out  66.7     3.8 0.00028   36.2   5.7   89  152-248     5-97  (244)
 53 d1a3xa2 c.1.12.1 (A:1-87,A:189  66.3      18  0.0013   32.0  10.4   89  150-249    21-111 (265)
 54 d1o4ua1 c.1.17.1 (A:104-273) Q  66.2    0.97   7E-05   38.0   1.5   59  115-184    99-157 (170)
 55 d1gcya2 c.1.8.1 (A:1-357) G4-a  65.7     5.6  0.0004   36.0   7.1   62  163-226    40-119 (357)
 56 d2dmda1 g.37.1.1 (A:34-61) Zin  65.0    0.82   6E-05   25.5   0.5   11   64-74      3-13  (28)
 57 d1foba_ c.1.8.3 (A:) Beta-1,4-  64.7       3 0.00022   38.6   4.9  118  161-292    28-169 (334)
 58 d1m7xa3 c.1.8.1 (A:227-622) 1,  63.3     3.4 0.00025   37.6   5.0   75  152-227    18-117 (396)
 59 d1xkya1 c.1.10.1 (A:1-292) Dih  62.6      27   0.002   30.5  11.3   78  164-250    28-105 (292)
 60 d7a3ha_ c.1.8.3 (A:) Endogluca  62.2      47  0.0035   28.8  13.0  115  160-295    40-166 (300)
 61 d1ecea_ c.1.8.3 (A:) Endocellu  62.2      17  0.0012   32.5   9.9  126  162-294    46-195 (358)
 62 d1lwha2 c.1.8.1 (A:1-391) 4-al  62.0     1.9 0.00014   40.0   3.0   70  164-234    27-104 (391)
 63 d1ud2a2 c.1.8.1 (A:1-390) Bact  61.9     2.6 0.00019   38.2   3.9   30  196-226    78-107 (390)
 64 d2isya1 a.4.5.24 (A:2-64) Iron  61.7      17  0.0012   24.6   7.3   38  382-420    21-58  (63)
 65 d1m5wa_ c.1.24.1 (A:) Pyridoxi  61.4     3.1 0.00022   36.7   4.0   86  129-230   111-200 (242)
 66 d1m3ua_ c.1.12.8 (A:) Ketopant  61.3      27   0.002   30.7  10.6  146  198-359    91-256 (262)
 67 d2flia1 c.1.2.2 (A:3-219) D-ri  60.3     8.8 0.00064   32.9   6.9  147  164-324    18-196 (217)
 68 d1bqca_ c.1.8.3 (A:) Beta-mann  60.1      33  0.0024   29.7  11.4  120  163-302    35-168 (302)
 69 d1wzla3 c.1.8.1 (A:121-502) Ma  58.4     2.9 0.00021   38.6   3.5   74  164-238    57-138 (382)
 70 d1j0ha3 c.1.8.1 (A:124-505) Ne  58.4     2.5 0.00018   39.1   3.0   70  164-234    57-134 (382)
 71 d1dpua_ a.4.5.16 (A:) C-termin  57.9      11 0.00078   26.3   5.7   53  365-418     4-57  (69)
 72 d1v93a_ c.1.23.1 (A:) Methylen  57.6      46  0.0034   29.3  11.9   88  150-250    13-106 (292)
 73 d2bhua3 c.1.8.1 (A:111-530) Gl  57.4     1.8 0.00013   40.8   1.9  115  164-296    38-162 (420)
 74 d1ht6a2 c.1.8.1 (A:1-347) Plan  56.6     4.5 0.00033   36.2   4.5   63  164-227    25-96  (347)
 75 d1z05a1 a.4.5.63 (A:10-80) Tra  56.6      14   0.001   25.2   6.4   45  373-418     9-53  (71)
 76 d2hzta1 a.4.5.69 (A:4-98) Puta  56.5      24  0.0018   25.7   8.0   62  385-467    25-87  (95)
 77 d1qhoa4 c.1.8.1 (A:1-407) Cycl  56.5     2.6 0.00019   39.5   2.8   28  196-224   105-132 (407)
 78 d1hvxa2 c.1.8.1 (A:1-393) Bact  56.1     4.4 0.00032   37.5   4.5   63  163-226    27-108 (393)
 79 d2guya2 c.1.8.1 (A:1-381) Fung  55.9     2.9 0.00021   38.9   3.1   60  164-224    47-122 (381)
 80 d2g50a2 c.1.12.1 (A:12-115,A:2  55.8      61  0.0045   28.5  12.2   89  149-250    32-129 (282)
 81 d2obpa1 a.4.5.71 (A:12-92) Put  55.8      14   0.001   26.1   5.9   55  385-462    25-80  (81)
 82 d1ea9c3 c.1.8.1 (C:122-503) Ma  55.4     4.5 0.00033   37.0   4.4   69  164-233    55-131 (382)
 83 d2f2ea1 a.4.5.69 (A:5-146) Hyp  54.0      19  0.0014   28.6   7.5   62  385-468    34-95  (142)
 84 d1ua7a2 c.1.8.1 (A:4-347) Bact  53.9       2 0.00015   39.6   1.5   64  163-227    20-102 (344)
 85 d1klra_ g.37.1.1 (A:) ZFY {Hum  53.0     2.7  0.0002   23.7   1.3   12   64-75      2-13  (30)
 86 d1yx1a1 c.1.15.7 (A:3-252) Hyp  52.9     5.1 0.00037   34.8   4.0   25  226-250    76-100 (250)
 87 d2d3na2 c.1.8.1 (A:5-398) Bact  52.8     4.3 0.00031   37.6   3.7   63  163-226    24-105 (394)
 88 d1wi9a_ a.4.5.47 (A:) Hypothet  52.5      11 0.00081   26.3   4.9   38  378-416    15-52  (72)
 89 d2d1ha1 a.4.5.50 (A:1-109) Hyp  52.4      18  0.0013   26.7   6.9   73  375-467    26-99  (109)
 90 d1u83a_ c.1.27.1 (A:) (2r)-pho  52.2      28   0.002   30.4   8.9  113  115-248    42-166 (249)
 91 d2fswa1 a.4.5.69 (A:3-104) Hyp  52.1      19  0.0014   26.7   6.8   63  385-468    34-97  (102)
 92 d1gjwa2 c.1.8.1 (A:1-572) Malt  51.4     3.6 0.00026   40.1   3.0   61  163-224   123-206 (572)
 93 d2ev0a1 a.4.5.24 (A:2-62) Mang  51.3      17  0.0013   24.3   5.8   36  382-418    19-54  (61)
 94 d2aaaa2 c.1.8.1 (A:1-381) Fung  51.2     3.5 0.00026   38.3   2.8   60  164-224    47-122 (381)
 95 d1jhfa1 a.4.5.2 (A:2-72) LexA   50.9      21  0.0015   24.6   6.4   37  384-420    24-60  (71)
 96 d1eh9a3 c.1.8.1 (A:91-490) Gly  50.5       7 0.00051   35.9   4.9   72  152-224    13-102 (400)
 97 d1o66a_ c.1.12.8 (A:) Ketopant  50.0      48  0.0035   28.9  10.2  145  197-358    91-255 (260)
 98 d3bmva4 c.1.8.1 (A:1-406) Cycl  49.9     2.9 0.00021   39.0   1.9   28  196-224   114-141 (406)
 99 d1lqaa_ c.1.7.1 (A:) Tas prote  49.3      42   0.003   29.9  10.3   75  227-302   105-182 (346)
100 d1h3ga3 c.1.8.1 (A:96-517) Cyc  49.0     4.3 0.00031   37.9   3.0   62  164-226    57-130 (422)
101 d1g5aa2 c.1.8.1 (A:1-554) Amyl  48.5     4.8 0.00035   39.8   3.4   63  163-226   116-189 (554)
102 d1mxga2 c.1.8.1 (A:1-361) Bact  48.0     7.1 0.00052   35.7   4.4   60  164-224    32-111 (361)
103 d1stza1 a.4.5.51 (A:14-100) He  47.9      40  0.0029   24.2   7.8   39  379-417    18-57  (87)
104 d1tz9a_ c.1.15.6 (A:) Mannonat  47.5      23  0.0017   32.6   7.9   83  165-255    16-109 (353)
105 d1z6ra1 a.4.5.63 (A:12-81) Mlc  46.4      23  0.0017   24.1   6.1   45  372-417     7-51  (70)
106 d1rh9a1 c.1.8.3 (A:30-399) Bet  45.9      89  0.0065   27.0  13.8   51  163-223    42-105 (370)
107 d1bboa2 g.37.1.1 (A:29-57) Enh  45.6     2.7  0.0002   23.7   0.5   11   64-74      1-11  (29)
108 d1e43a2 c.1.8.1 (A:1-393) Bact  45.4     8.4 0.00061   35.6   4.5   28  196-224    76-103 (393)
109 d2pg4a1 a.4.5.48 (A:1-92) Unch  45.2      23  0.0017   24.3   5.6   55  385-460    30-84  (92)
110 d1gtea2 c.1.4.1 (A:533-844) Di  45.0      53  0.0038   28.9  10.1  139  128-294   154-312 (312)
111 d1g94a2 c.1.8.1 (A:1-354) Bact  44.7       8 0.00058   35.1   4.2   62  163-226    18-91  (354)
112 d1hx0a2 c.1.8.1 (A:1-403) Anim  44.3     4.2 0.00031   37.8   2.1   60  163-224    26-101 (403)
113 d1sfxa_ a.4.5.50 (A:) Hypothet  43.7      32  0.0024   25.4   7.1   44  374-418    24-67  (109)
114 d1bf2a3 c.1.8.1 (A:163-637) Is  41.9     4.2 0.00031   38.6   1.7   30  196-226   108-137 (475)
115 d1nvma2 c.1.10.5 (A:2-290) 4-h  41.7      78  0.0057   27.1  10.7   88  148-251    80-169 (289)
116 d1x7fa2 c.1.8.12 (A:1-244) Out  41.3      26  0.0019   30.5   6.8  117  131-295    50-176 (244)
117 d1qtwa_ c.1.15.1 (A:) Endonucl  41.0      42  0.0031   28.6   8.5   85  163-251    15-110 (285)
118 d1m53a2 c.1.8.1 (A:43-520) Iso  40.1     7.9 0.00057   36.5   3.4   70  164-234    35-113 (478)
119 d1uoka2 c.1.8.1 (A:1-479) Olig  39.4     5.2 0.00038   37.9   1.9   71  164-235    35-114 (479)
120 d1hl2a_ c.1.10.1 (A:) N-acetyl  39.2      92  0.0067   26.8  10.7   16  452-467   277-292 (295)
121 d1tbxa_ a.4.5.48 (A:) Hypothet  38.0      50  0.0036   22.7   6.4   61  379-461    15-78  (94)
122 d1z7ua1 a.4.5.69 (A:1-108) Hyp  37.8      34  0.0025   25.5   6.3   63  384-467    32-95  (108)
123 d1yyva1 a.4.5.69 (A:9-122) Put  37.5      35  0.0026   25.7   6.3   72  375-468    29-101 (114)
124 d2v9va2 a.4.5.35 (A:438-510) C  37.3      28  0.0021   23.8   5.3   38  381-418    23-61  (73)
125 d1ajza_ c.1.21.1 (A:) Dihydrop  35.6      49  0.0036   29.2   7.9  113  115-239    52-204 (282)
126 d1m5wa_ c.1.24.1 (A:) Pyridoxi  35.5      68  0.0049   27.6   8.6   89  150-251    66-155 (242)
127 d3cu0a1 c.68.1.7 (A:75-335) 1,  35.5      66  0.0048   27.9   8.6   93  117-212     2-98  (261)
128 d1xkya1 c.1.10.1 (A:1-292) Dih  35.4 1.3E+02  0.0093   25.7  14.0   87  114-211    37-127 (292)
129 d1eyea_ c.1.21.1 (A:) Dihydrop  35.2      39  0.0028   29.6   7.2   55  164-220    29-83  (270)
130 d1pkla2 c.1.12.1 (A:1-87,A:187  35.1   1E+02  0.0074   26.6   9.9   86  150-249    21-111 (258)
131 d1xxxa1 c.1.10.1 (A:5-300) Dih  34.9 1.3E+02  0.0096   25.8  12.1   53  198-251    88-140 (296)
132 d1kwga2 c.1.8.1 (A:1-393) A4 b  34.6      19  0.0014   31.4   5.1   62  157-221     7-72  (393)
133 d1lvaa4 a.4.5.35 (A:575-634) C  34.4      59  0.0043   21.6   6.3   47  376-423    10-56  (60)
134 d1uuqa_ c.1.8.3 (A:) Exomannos  34.0      37  0.0027   30.1   7.1   59  163-222    44-112 (410)
135 d2dmda3 g.37.1.1 (A:62-90) Zin  34.0     5.3 0.00038   22.3   0.5   11   64-74      3-13  (29)
136 d1qzza1 a.4.5.29 (A:10-101) Ac  33.7      33  0.0024   24.8   5.4   53  383-459    39-91  (92)
137 d1h1ya_ c.1.2.2 (A:) D-ribulos  33.7      32  0.0023   29.2   6.1  127   97-258    15-146 (220)
138 d2hs5a1 a.4.5.6 (A:25-93) Puta  33.5      51  0.0037   22.1   6.1   34  385-419    26-59  (69)
139 d1f74a_ c.1.10.1 (A:) N-acetyl  33.5 1.4E+02    0.01   25.5  13.6  113  115-242    39-157 (293)
140 d1i60a_ c.1.15.4 (A:) Hypothet  33.3     8.9 0.00065   33.4   2.3   83  164-250    88-172 (278)
141 d2flia1 c.1.2.2 (A:3-219) D-ri  33.2      23  0.0017   30.1   5.0   44  131-180   153-196 (217)
142 d1tqja_ c.1.2.2 (A:) D-ribulos  32.9      22  0.0016   30.2   4.9   44  131-180   156-199 (221)
143 d1ku9a_ a.4.5.36 (A:) DNA-bind  32.7      65  0.0047   24.6   7.6   36  382-418    39-74  (151)
144 d1o5ka_ c.1.10.1 (A:) Dihydrod  32.5      67  0.0049   27.7   8.5   54  197-252    81-135 (295)
145 d2cg4a1 a.4.5.32 (A:4-66) Regu  31.2      45  0.0033   22.0   5.4   43  373-416     8-50  (63)
146 d1o5ka_ c.1.10.1 (A:) Dihydrod  30.7 1.5E+02   0.011   25.2  12.9   96  115-225    36-136 (295)
147 d2cbia2 c.1.8.10 (A:179-495) H  28.8      21  0.0015   32.4   4.1   82  164-251    22-118 (317)
148 d1tqxa_ c.1.2.2 (A:) D-ribulos  28.7      16  0.0012   31.2   3.2   43  131-180   156-198 (221)
149 d1shux_ c.62.1.1 (X:) Capillar  28.5      75  0.0055   24.9   7.5   68  121-192    78-152 (181)
150 d1k77a_ c.1.15.5 (A:) Hypothet  28.0      90  0.0065   25.5   8.3  108  163-294    18-139 (260)
151 d2al1a1 c.1.11.1 (A:142-436) E  27.8      69   0.005   28.4   7.5  104  128-247   132-254 (295)
152 d2cfxa1 a.4.5.32 (A:1-63) Tran  27.8      76  0.0055   20.8   6.1   42  374-416     9-50  (63)
153 d2ghfa2 g.37.1.1 (A:9-44) Zinc  27.7     8.7 0.00063   22.6   0.7   10   65-74     11-20  (36)
154 d1rpxa_ c.1.2.2 (A:) D-ribulos  27.6      38  0.0027   29.0   5.5   29  151-180   179-207 (230)
155 d1f3ta2 c.1.6.1 (A:44-283) Euk  27.5      64  0.0046   27.1   7.2   90  129-249     1-90  (240)
156 d1f74a_ c.1.10.1 (A:) N-acetyl  27.1 1.6E+02   0.012   25.1  10.2   51  197-249    55-105 (293)
157 d1tz9a_ c.1.15.6 (A:) Mannonat  26.9      79  0.0057   28.7   8.0   84  205-297    17-103 (353)
158 d1o4ua1 c.1.17.1 (A:104-273) Q  26.8 1.3E+02  0.0097   24.0   8.7   93  134-254    65-157 (170)
159 d1ccwa_ c.23.6.1 (A:) Glutamat  26.8      23  0.0017   27.7   3.6   73  162-247    43-116 (137)
160 d1li4a2 c.23.12.3 (A:3-189,A:3  26.6      47  0.0034   29.1   5.9   73  149-243    45-119 (267)
161 d1w6ta1 c.1.11.1 (A:138-433) E  26.6      60  0.0043   28.8   6.8  108  126-247   130-256 (296)
162 d1wzaa2 c.1.8.1 (A:28-436) Bac  26.6      10 0.00073   34.7   1.4   38  196-234    79-116 (409)
163 d2akza1 c.1.11.1 (A:140-433) E  26.2 1.1E+02  0.0079   26.9   8.6  101  127-242   130-250 (294)
164 d2f6ua1 c.1.4.1 (A:1001-1231)   25.8      56  0.0041   27.5   6.4   48  156-214    12-60  (231)
165 d1j5ya1 a.4.5.1 (A:3-67) Putat  25.4      75  0.0055   20.9   5.7   40  374-414    11-51  (65)
166 d2ptza1 c.1.11.1 (A:139-429) E  25.4      80  0.0058   27.8   7.5  105  126-242   129-252 (291)
167 d1hw1a1 a.4.5.6 (A:5-78) Fatty  25.4      90  0.0065   21.2   6.3   33  386-419    29-61  (74)
168 d2dmda2 g.37.1.1 (A:8-33) Zinc  25.3      11  0.0008   20.4   0.8    9   64-72      1-9   (26)
169 d2c0ha1 c.1.8.3 (A:18-367) end  25.3      48  0.0035   28.4   6.1   59  163-223    45-111 (350)
170 d1xmaa_ a.4.5.61 (A:) Predicte  25.2      51  0.0037   24.1   5.2   47  401-465    44-91  (103)
171 d2fi0a1 a.248.1.1 (A:3-81) Hyp  25.2     4.1  0.0003   29.4  -1.4   49  163-217    21-77  (79)
172 d1vffa1 c.1.8.4 (A:1-423) Beta  25.2      30  0.0022   32.3   4.7  102  163-269    53-169 (423)
173 d2choa2 c.1.8.10 (A:127-436) G  25.2      47  0.0035   29.7   5.9   81  164-251    22-115 (310)
174 d1v8ba2 c.23.12.3 (A:4-234,A:3  25.1      54  0.0039   29.4   6.2   85  137-242    28-117 (313)
175 d2p6ra1 a.4.5.43 (A:404-488) H  24.9      49  0.0035   23.3   4.8   23  395-417    45-67  (85)
176 d1zyba1 a.4.5.4 (A:148-220) Pr  24.3      98  0.0071   20.9   8.6   34  385-419    28-61  (73)
177 d2cyya1 a.4.5.32 (A:5-64) Puta  24.3      56  0.0041   21.2   4.8   42  374-416     7-48  (60)
178 d2bgca1 a.4.5.4 (A:138-237) Li  24.0      69   0.005   23.3   5.7   36  384-419    31-66  (100)
179 d1ghsa_ c.1.8.3 (A:) Plant bet  23.7      36  0.0026   30.3   4.7   54  163-239    16-69  (306)
180 d2a6na1 c.1.10.1 (A:1-292) Dih  23.5   1E+02  0.0075   26.5   8.0   15  128-142    19-33  (292)
181 d2f5tx2 d.136.1.5 (X:110-246)   23.2      36  0.0026   25.6   3.8   53  194-251     4-56  (137)
182 d3bwga1 a.4.5.6 (A:5-82) Trans  22.6 1.1E+02  0.0079   20.8   7.0   34  386-420    24-57  (78)
183 d1sfua_ a.4.5.19 (A:) 34L {Yab  22.5 1.1E+02  0.0081   20.8   6.2   47  373-420    13-59  (70)
184 d1oywa1 a.4.5.43 (A:407-516) D  22.4      58  0.0043   24.0   5.1   36  401-459    62-97  (110)
185 d1vpqa_ c.1.32.1 (A:) Hypothet  22.3      80  0.0059   27.2   6.8   59  115-179   109-169 (260)
186 d1tw3a1 a.4.5.29 (A:14-98) Car  22.2      85  0.0062   21.8   5.8   37  382-419    32-68  (85)
187 d1uuqa_ c.1.8.3 (A:) Exomannos  22.1 1.1E+02  0.0076   26.7   7.9   68  227-296    38-107 (410)
188 d1ajza_ c.1.21.1 (A:) Dihydrop  21.8 1.7E+02   0.013   25.3   9.1   22  275-296   159-180 (282)
189 d2cyga1 c.1.8.3 (A:29-340) Pla  21.8      20  0.0015   32.3   2.5   48  163-233    16-63  (312)
190 d1r30a_ c.1.28.1 (A:) Biotin s  21.6 1.5E+02   0.011   25.3   8.8   50  128-180   235-284 (312)
191 d1h1ya_ c.1.2.2 (A:) D-ribulos  21.5      16  0.0011   31.3   1.6   28  152-180   169-196 (220)
192 d1rd5a_ c.1.2.4 (A:) Trp synth  21.4 1.5E+02   0.011   25.4   8.4   50  162-211    33-91  (261)
193 d1hkva2 c.1.6.1 (A:46-310) Dia  21.1      72  0.0052   27.2   6.3   51  131-189     3-53  (265)
194 d1vema2 c.1.8.1 (A:1-417) Bact  20.7      40  0.0029   31.5   4.4   52  163-218    32-84  (417)
195 d1xxxa1 c.1.10.1 (A:5-300) Dih  20.6 2.4E+02   0.017   23.9  15.3   98  115-226    42-143 (296)
196 d1bf6a_ c.1.9.3 (A:) Phosphotr  20.3 2.3E+02   0.017   23.7  12.5  138   91-249    97-239 (291)

No 1  
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=2.8e-79  Score=637.55  Aligned_cols=377  Identities=21%  Similarity=0.388  Sum_probs=343.9

Q ss_pred             CCCCeEEEEeccCCCcCCcCCCCCcccCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCeeEEEEcCCCCCCCC
Q 012112           50 QLSPTSAYIHLPFCRKRCHYCDFPIVALGSSPTQTNDDDPRVSNYIQLLCREIIATKPGHKTSPPLETVFFGGGTPSLVP  129 (471)
Q Consensus        50 ~~~~~~lYiHIPFC~~~C~yC~f~~~~~~~~~~~~~~~~~~~~~yv~~l~~Ei~~~~~~~~~~~~v~~i~fGGGTps~l~  129 (471)
                      +..|+|||||||||+++|.||+|++...        .......+|+++|++||+..+.... +..+.+|||||||||+|+
T Consensus        46 ~~~plsLYiHiPFC~~~C~yC~~~~~~~--------~~~~~~~~Y~~~L~~Ei~~~~~~~~-~~~v~~i~~GGGTPt~L~  116 (441)
T d1olta_          46 PERPLSLYVHIPFCHKLCYFCGCNKIVT--------RQQHKADQYLDALEQEIVHRAPLFA-GRHVSQLHWGGGTPTYLN  116 (441)
T ss_dssp             TTSCEEEEEEECEESSCCTTCCSSCEEC--------SCTHHHHHHHHHHHHHHHHHGGGGT-TCCEEEEEEEESCGGGSC
T ss_pred             CCCceEEEEEeCCCCCCCCCCcCeeecC--------CCcchHHHHHHHHHHHHHHhhHhcC-CCccceeEecCCCcCCCC
Confidence            5678999999999999999999987653        2356788999999999998766543 577999999999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHH
Q 012112          130 PRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVK  209 (471)
Q Consensus       130 ~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~  209 (471)
                      ++++.+|++.+++.|.+.+++|+|+|++|.+++.++++.|+++||||||+||||||+++|+.|||.|+.+++.++++.++
T Consensus       117 ~~~l~~ll~~l~~~~~~~~~~e~t~E~~P~~~~~~~l~~l~~~G~nRiSlGvQs~~~~vl~~i~R~~~~~~~~~~~~~~r  196 (441)
T d1olta_         117 KAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAR  196 (441)
T ss_dssp             HHHHHHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccccchhcccccccccccchHHHHHHHHhCCceEEecchhcchhhhhhhhcCCCHHHHHHHHHHHH
Confidence            99999999999999999899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Q 012112          210 LCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLS  289 (471)
Q Consensus       210 ~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~  289 (471)
                      ++||.+||+|||||+||||.++|.+||+.+++++|+||++|+|.++|+|...+ ...++..+|++++..+||..+.+.|.
T Consensus       197 ~~g~~~vn~DLI~GlPgqT~~~~~~tl~~~~~l~pd~is~y~~~~~p~~~~~q-~~~~~~~lp~~~~~~~~~~~~~~~L~  275 (441)
T d1olta_         197 EIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQ-RKIKDADLPSPQQKLDILQETIAFLT  275 (441)
T ss_dssp             HTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGG-GGSCGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hcccceeecccccccCCcchHHHHHHHHHHHhhCCCccccccceeccchhHhh-hhccccchhhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999877665 44567788999999999999999999


Q ss_pred             HCCCceeccccccCCCcc------------hhhhhhhhcCCCEEEEccCcccccCCeEEEcCCChHHHHHHHHHHhcCCC
Q 012112          290 SAGYRHYEISSYGEDGYE------------CKHNLTYWKNKPFYGFGLGSASYLGGLRFSRPRRMKEFVDYVQNLEAGLV  357 (471)
Q Consensus       290 ~~Gy~~yeis~fa~~g~~------------~~hn~~yw~~~~ylG~G~gA~s~~~~~r~~n~~~~~~y~~~~~~~~~g~~  357 (471)
                      ++||.+|+++||+||+.+            +.||..+|...+++|||+||+|++++.+++|..++++|.+.   +++|.+
T Consensus       276 ~~GY~~~~~~~far~~~~~~~a~~~g~~~r~~~gy~~~~~~~~iGlG~sA~S~~~~~~~~N~~~l~~Y~~~---i~~g~l  352 (441)
T d1olta_         276 QSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGDCYAQNQKELKQYYQQ---VDEQGN  352 (441)
T ss_dssp             HTTCEEEETTEEECTTSHHHHHHHHTCCEECSSCEESCCSCEEEEESTTCEEEETTEEEEECSSHHHHHHH---HHHHSC
T ss_pred             HcCchhhhHHHhhhcchhhhhhhhhhhhcccccccccCCCcceeecccCceeeeecceeeeehhhhhhhhh---hhhcCC
Confidence            999999999999999854            34667778889999999999999999999999999988754   567889


Q ss_pred             cccccccCCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHH---HHHHHHHCCCEEEecCcccchhhhhhhhhh
Q 012112          358 DCWGNNHIDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCK---AYKPYIESGHVICLDEWRRAMNIEEFNSLL  434 (471)
Q Consensus       358 ~~~~~~~l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~---~~~~~~~~gll~~~~~~~~~l~~~~~~~~~  434 (471)
                      |+.....++.+|++.+.+|++||+..|||.+.|+++||.++.+.|.+   .++.|+++||++.++ +             
T Consensus       353 p~~~g~~Ls~~d~~~~~vi~~L~~~~~ld~~~~~~~fg~~~~~~f~~~~~~L~~l~~~GLv~~~~-~-------------  418 (441)
T d1olta_         353 ALWRGIALTRDDCIRRDVIKSLICNFRLDYSPIEQQWDLLFADYFAEDLKLLAPLAKDGLVDVDE-K-------------  418 (441)
T ss_dssp             CEEEEEECCHHHHHHHHHHHHHHHHSEEEHHHHHHHTTCCHHHHTHHHHHHHHHHHHTTSEEECS-S-------------
T ss_pred             cceeeeeCCHHHHHHHHHHHHHHHhCCcCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEC-C-------------
Confidence            98777789999999999999999999999999999999999887764   567788899998654 3             


Q ss_pred             hhhhhcccccceeeecCchhhchHHHHHHHH
Q 012112          435 LDETKIGNRLAYFRLSDPEGFLLSNELISHA  465 (471)
Q Consensus       435 ~~~~~~~~~~~~~~lt~~~G~~~~n~i~~~~  465 (471)
                                 +++|| ++|+++.|.|+..|
T Consensus       419 -----------~l~lT-~~Gr~l~~~I~~~F  437 (441)
T d1olta_         419 -----------GIQVT-AKGRLLIRNICMCF  437 (441)
T ss_dssp             -----------EEEEC-TTTGGGHHHHHHTT
T ss_pred             -----------EEEEC-HhHHHHHHHHHHHH
Confidence                       47997 99999999998866


No 2  
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=99.79  E-value=9.9e-19  Score=171.60  Aligned_cols=201  Identities=13%  Similarity=0.142  Sum_probs=150.0

Q ss_pred             CCCcCCcCCCCCcccCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCeeEEEEcCCCCCC--CCHHHHHHHHHH
Q 012112           62 FCRKRCHYCDFPIVALGSSPTQTNDDDPRVSNYIQLLCREIIATKPGHKTSPPLETVFFGGGTPSL--VPPRFVSSILDT  139 (471)
Q Consensus        62 FC~~~C~yC~f~~~~~~~~~~~~~~~~~~~~~yv~~l~~Ei~~~~~~~~~~~~v~~i~fGGGTps~--l~~~~l~~ll~~  139 (471)
                      .|+.+|.||+|.......       ........++.+++|++.....     ++..+++.||....  ...+.+.++++.
T Consensus        49 gC~~~C~fC~~~~~~~~~-------~~~~~~~~~e~i~~~~~~~~~~-----G~~~~~~~~g~~~~~~~~~~~~~~~i~~  116 (312)
T d1r30a_          49 ACPEDCKYCPQSSRYKTG-------LEAERLMEVEQVLESARKAKAA-----GSTRFCMGAAWKNPHERDMPYLEQMVQG  116 (312)
T ss_dssp             CBSSCCSSCSCBTTSCTT-------CCCCCCCCHHHHHHHHHHHHHT-----TCSEEEEEECCSSCCTTTHHHHHHHHHH
T ss_pred             CCCCcCCcCCCCccCCCC-------CccccccchHHHHHHHHHHHHc-----CCEEEEEccCCCCCchhhHHHHHHHHHh
Confidence            399999999987542111       0111112356667777655432     25556666664332  334555555555


Q ss_pred             HHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEee
Q 012112          140 LTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLD  219 (471)
Q Consensus       140 l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~D  219 (471)
                      +++.+       +.+.+++..++++.++.|+++|++++.+|++| +++.++.+.++++.++..++++.++++|+. ++..
T Consensus       117 ~~~~~-------~~~~~~~~~l~~e~l~~lk~aG~~~i~~~iEs-~~~~~~~~~~~~~~~~~~~~~~~a~~~Gi~-~~~~  187 (312)
T d1r30a_         117 VKAMG-------LEACMTLGTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNIITTRTYQERLDTLEKVRDAGIK-VCSG  187 (312)
T ss_dssp             HHHTT-------SEEEEECSSCCHHHHHHHHHHCCCEEECCCBS-CHHHHHHHCCSSCHHHHHHHHHHHHHHHCE-EECC
T ss_pred             ccccc-------ceeeeccccchHHHHHHhhcccceeEecccch-hhhhhccCCCCCCHHHHHHHHHHHHHhccc-eecc
Confidence            55432       34445677899999999999999999999999 566788899999999999999999999997 9999


Q ss_pred             eecCCCCCCHHHHHHHHHHHHhCC--CCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012112          220 LISSLPHQTPQMWEESLRRTVGAQ--PKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSS  290 (471)
Q Consensus       220 lI~GlPgqT~e~~~~~l~~~~~l~--p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~  290 (471)
                      +|+|+ |||.+++.+.+..+.+++  ++.++++.+.+.|||++...      +.++.++...+...++-+|..
T Consensus       188 ~i~G~-~et~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~------~~~~~~e~l~~iA~~Rl~lp~  253 (312)
T d1r30a_         188 GIVGL-GETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADN------DDVDAFDFIRTIAVARIMMPT  253 (312)
T ss_dssp             EEECS-SCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSC------CCCCHHHHHHHHHHHHHHCTT
T ss_pred             eEecC-cCcHHHHHHHHHHHHhcCCCCCeeeeccccCCCCcccccc------cCCCHHHHHHHHHHHHHhCCC
Confidence            99999 799999999999998775  57899999999999998754      456788888888777666544


No 3  
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=98.76  E-value=1.4e-07  Score=90.85  Aligned_cols=181  Identities=14%  Similarity=0.181  Sum_probs=122.3

Q ss_pred             eEEEEeccC-CCcCCcCCCCCcccCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCCeeEEEEcCCCCCCCCHHH
Q 012112           54 TSAYIHLPF-CRKRCHYCDFPIVALGSSPTQTNDDDPRVSNYIQLLCREIIATKPGHKTSPPLETVFFGGGTPSLVPPRF  132 (471)
Q Consensus        54 ~~lYiHIPF-C~~~C~yC~f~~~~~~~~~~~~~~~~~~~~~yv~~l~~Ei~~~~~~~~~~~~v~~i~fGGGTps~l~~~~  132 (471)
                      ..|.|+|-- |..+|.||.............. .....-..-+..+++|+...        ++..+.|.||-|.+ .++.
T Consensus        12 ~~l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~-~~~~ls~e~~~~li~~~~~~--------g~~~v~~~GGEp~l-~~~~   81 (327)
T d1tv8a_          12 RDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLP-KNELLTFDEMARIAKVYAEL--------GVKKIRITGGEPLM-RRDL   81 (327)
T ss_dssp             CEEEEECCSCCSCCCTTTSCTTTSSTTCCCCC-GGGSCCHHHHHHHHHHHHHT--------TCCEEEEESSCGGG-STTH
T ss_pred             CcEEEEeccccCCcCcCCCCccccCCCCccCC-ccccCCHHHHHHHHHHHHHc--------CCeEEEeCCCcccc-cccH
Confidence            468899988 9999999964322111000000 00001123445566776543        25667788888875 4444


Q ss_pred             HHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHc-CCCCCHHHHHHHHHHHHHc
Q 012112          133 VSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSC-GRAHGLKEVYEAIEIVKLC  211 (471)
Q Consensus       133 l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l-~R~~t~~~~~~ai~~~~~~  211 (471)
                      ++.+.. +.+..    .....+-+|-..++++.++.|+++|+.+|++.+++.+++.-+.+ ++..+.+.+.++++.++++
T Consensus        82 ~e~i~~-~~~~~----~~~~~~~Tng~ll~~~~~~~l~~~g~~~i~iSldg~~~e~~~~~rg~~g~~~~~~~~~~~~~~~  156 (327)
T d1tv8a_          82 DVLIAK-LNQID----GIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSI  156 (327)
T ss_dssp             HHHHHH-HTTCT----TCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHH-Hhhhc----cccccccccccccchhHHHHHHHcCCCEEeeecccCCHHHhhhheeeccccchhhhHHHHHHHc
Confidence            443333 32221    12333446667889999999999999999999999998877654 6677899999999999999


Q ss_pred             CCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEec
Q 012112          212 GVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYDL  252 (471)
Q Consensus       212 G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~l  252 (471)
                      |+. +.+..++ .++.+.+.+.+.++.+...+.+ +.+...
T Consensus       157 g~~-~~~~~~v-~~~~n~~~~~~~~~~~~~~~~~-~~~~~~  194 (327)
T d1tv8a_         157 GLN-VKVNVVI-QKGINDDQIIPMLEYFKDKHIE-IRFIEF  194 (327)
T ss_dssp             TCE-EEEEEEE-CTTTTGGGHHHHHHHHHHTTCC-EEEEEC
T ss_pred             CCC-cceeEEE-ecCccccccHHHHHHHHhhccc-cceeee
Confidence            986 7776654 5788889999999999999876 333333


No 4  
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=94.18  E-value=0.055  Score=40.55  Aligned_cols=65  Identities=8%  Similarity=0.061  Sum_probs=50.7

Q ss_pred             CCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHH
Q 012112          383 RGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELI  462 (471)
Q Consensus       383 ~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~  462 (471)
                      .++...++.++.|.+.. .+...++.|++.||+....+.                     |.-+++|| ++|..+...++
T Consensus        20 ~~lt~~eLa~~l~i~~~-~vs~~l~~Le~~GlV~r~~D~---------------------R~~~i~LT-~~G~~~l~~~~   76 (85)
T d3ctaa1          20 AYLTSSKLADMLGISQQ-SASRIIIDLEKNGYITRTVTK---------------------RGQILNIT-EKGLDVLYTEF   76 (85)
T ss_dssp             EECCHHHHHHHHTSCHH-HHHHHHHHHHHTTSEEEEEET---------------------TEEEEEEC-HHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHCCCHH-HHHHHHHHHHHCCCeeeeccc---------------------ccccceEC-HHHHHHHHHHH
Confidence            35778888888888754 467889999999999875432                     33468997 99999999999


Q ss_pred             HHHHhccc
Q 012112          463 SHAFGVID  470 (471)
Q Consensus       463 ~~~~~~~~  470 (471)
                      .++-..++
T Consensus        77 ~~~~rlle   84 (85)
T d3ctaa1          77 ADLSRILA   84 (85)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHhc
Confidence            88866554


No 5  
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=92.55  E-value=0.16  Score=41.17  Aligned_cols=73  Identities=14%  Similarity=0.089  Sum_probs=56.9

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCc
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDP  452 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~  452 (471)
                      ..++..|....++...++++.+|.+-. .....++.|++.|||+...+.                  .+.|.-.|+|| +
T Consensus        35 ~~iL~~l~~~~~~t~~~La~~l~i~~~-~vs~~v~~L~~~gli~r~~~~------------------~D~R~~~l~lT-~   94 (140)
T d2etha1          35 LYAFLYVALFGPKKMKEIAEFLSTTKS-NVTNVVDSLEKRGLVVREMDP------------------VDRRTYRVVLT-E   94 (140)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHTTSCHH-HHHHHHHHHHHTTSEEEEECT------------------TTSSCEEEEEC-H
T ss_pred             HHHHHHHHHcCCcCHHHHHHHHCcCHH-HHHHHHHHHHHCCCeeeeecc------------------cccchhhhhcC-H
Confidence            455666677788999999999999864 567889999999999865421                  24566689997 9


Q ss_pred             hhhchHHHHHHHH
Q 012112          453 EGFLLSNELISHA  465 (471)
Q Consensus       453 ~G~~~~n~i~~~~  465 (471)
                      +|..+.+.+...+
T Consensus        95 ~G~~~~~~~~~~~  107 (140)
T d2etha1          95 KGKEIFGEILSNF  107 (140)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999998875544


No 6  
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=91.88  E-value=0.25  Score=40.16  Aligned_cols=73  Identities=12%  Similarity=0.015  Sum_probs=51.1

Q ss_pred             HHHHhcc-ccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCc
Q 012112          374 VLMLSFR-TARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDP  452 (471)
Q Consensus       374 ~~~~~Lr-~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~  452 (471)
                      .++..|- ...++...++.++.|.+-. .+...++.|++.|||+...+.                  .+.|.-+|+|| +
T Consensus        38 ~vL~~L~~~~g~~t~~~La~~~~~~~~-~vs~~i~~L~~~glv~r~~~~------------------~DrR~~~i~LT-~   97 (145)
T d2hr3a1          38 VVLGAIDRLGGDVTPSELAAAERMRSS-NLAALLRELERGGLIVRHADP------------------QDGRRTRVSLS-S   97 (145)
T ss_dssp             HHHHHHHHTTSCBCHHHHHHHTTCCHH-HHHHHHHHHHHTTSEEEEC------------------------CCEEEEC-H
T ss_pred             HHHHHHHHcCCCCCHHHHHHHHCCCHH-HHHHHHHHHHHcCCeEeeeCc------------------cchhHHHhccC-H
Confidence            3444453 3345999999999999864 467889999999999865421                  13455589997 9


Q ss_pred             hhhchHHHHHHHHH
Q 012112          453 EGFLLSNELISHAF  466 (471)
Q Consensus       453 ~G~~~~n~i~~~~~  466 (471)
                      +|+.+.+.+.....
T Consensus        98 ~G~~~~~~~~~~~~  111 (145)
T d2hr3a1          98 EGRRNLYGNRAKRE  111 (145)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999877654443


No 7  
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=91.73  E-value=0.19  Score=40.97  Aligned_cols=72  Identities=11%  Similarity=0.131  Sum_probs=54.9

Q ss_pred             HHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchh
Q 012112          375 LMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEG  454 (471)
Q Consensus       375 ~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G  454 (471)
                      ++..|....|+...++.++++.+-. .+...++.|++.|||....+.                  ...|.-+|.|| ++|
T Consensus        34 iL~~i~~~~~~t~~~la~~l~i~~~-tvs~~l~~L~~~glI~r~~~~------------------~D~R~~~l~LT-~~G   93 (144)
T d1lj9a_          34 YLVRVCENPGIIQEKIAELIKVDRT-TAARAIKRLEEQGFIYRQEDA------------------SNKKIKRIYAT-EKG   93 (144)
T ss_dssp             HHHHHHHSTTEEHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEECS------------------SCTTCEEEEEC-HHH
T ss_pred             HHHHHHhCCCCCHHHHHHHHCccHh-hHHHHHHHHHhhhcccccCCC------------------CCCCccccccC-HHH
Confidence            3444555789999999999999854 577899999999999865421                  13456689997 999


Q ss_pred             hchHHHHHHHHH
Q 012112          455 FLLSNELISHAF  466 (471)
Q Consensus       455 ~~~~n~i~~~~~  466 (471)
                      .-+.+.+...+-
T Consensus        94 ~~~~~~~~~~~~  105 (144)
T d1lj9a_          94 KNVYPIIVRENQ  105 (144)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999988765543


No 8  
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=91.20  E-value=0.27  Score=38.55  Aligned_cols=86  Identities=10%  Similarity=-0.002  Sum_probs=61.4

Q ss_pred             cCCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccc
Q 012112          364 HIDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNR  443 (471)
Q Consensus       364 ~l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~  443 (471)
                      .++..+...=..+ ......|+...+++++.|.+-. .....++.|++.||+....+                  ..+.|
T Consensus        29 ~Lt~~q~~vL~~l-~~~~~~~~t~~ela~~l~~~~~-~vs~~i~~Le~~gli~r~~~------------------~~D~R   88 (115)
T d1hsja1          29 NLNYEEIYILNHI-LRSESNEISSKEIAKCSEFKPY-YLTKALQKLKDLKLLSKKRS------------------LQDER   88 (115)
T ss_dssp             CCCHHHHHHHHHH-HTCSCSEEEHHHHHHSSCCCHH-HHHHHHHHHHTTTTSCCEEC------------------CSSSS
T ss_pred             CCCHHHHHHHHHH-HccCCCCcCHHHHHHHHCCChh-hHHHHHHHHHHcCCeEEEee------------------cCCCc
Confidence            4666543222111 2223457999999999999854 46788999999999975421                  12456


Q ss_pred             cceeeecCchhhchHHHHHHHHHhccc
Q 012112          444 LAYFRLSDPEGFLLSNELISHAFGVID  470 (471)
Q Consensus       444 ~~~~~lt~~~G~~~~n~i~~~~~~~~~  470 (471)
                      .-+|.|| ++|..+.+.++.++-.+|.
T Consensus        89 ~~~i~LT-~~G~~~~~~~~~~~~~~i~  114 (115)
T d1hsja1          89 TVIVYVT-DTQKANIQKLISELEEYIK  114 (115)
T ss_dssp             CCEEECC-SSHHHHHHHHHHHHGGGSC
T ss_pred             eEEEEEC-HHHHHHHHHHHHHHHHHhc
Confidence            6689997 9999999999999887775


No 9  
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=91.04  E-value=0.18  Score=40.68  Aligned_cols=72  Identities=10%  Similarity=0.029  Sum_probs=54.0

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCch
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPE  453 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~  453 (471)
                      .++.-|....++...++.+.++.+-. .+...++.|++.|||+...+.                  .+.|.-.|+|| ++
T Consensus        34 ~vL~~l~~~~~~t~~~la~~~~i~~~-~vs~~i~~L~~~gli~r~~~~------------------~D~R~~~l~lT-~~   93 (136)
T d2fbia1          34 RVIRILRQQGEMESYQLANQACILRP-SMTGVLARLERDGIVRRWKAP------------------KDQRRVYVNLT-EK   93 (136)
T ss_dssp             HHHHHHHHHCSEEHHHHHHHTTCCHH-HHHHHHHHHHHTTSEEEEEET------------------TEEEEEEEEEC-HH
T ss_pred             HHHHHHHHcCCCCHHHHHHHHCCCHH-HHHHHHHHHHHCCCEEEeecC------------------ccCchhhhccC-HH
Confidence            33444556778999999999999864 567889999999999865321                  13455579997 99


Q ss_pred             hhchHHHHHHHH
Q 012112          454 GFLLSNELISHA  465 (471)
Q Consensus       454 G~~~~n~i~~~~  465 (471)
                      |..+.+.+....
T Consensus        94 G~~~~~~~~~~~  105 (136)
T d2fbia1          94 GQQCFVSMSGDM  105 (136)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999876543


No 10 
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=90.89  E-value=0.4  Score=38.61  Aligned_cols=76  Identities=17%  Similarity=0.163  Sum_probs=56.6

Q ss_pred             CCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhccccc
Q 012112          365 IDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRL  444 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  444 (471)
                      ++..+   ..++.-|....|+...++.+..+.+-. .....+++|+++|||+...+.                  ...|.
T Consensus        32 Lt~~q---~~vL~~l~~~~~~t~~ela~~~~i~~~-~vs~~v~~L~~~glv~r~~~~------------------~D~R~   89 (138)
T d1jgsa_          32 ITAAQ---FKVLCSIRCAACITPVELKKVLSVDLG-ALTRMLDRLVCKGWVERLPNP------------------NDKRG   89 (138)
T ss_dssp             SCHHH---HHHHHHHHHHSSBCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEECT------------------TCSSC
T ss_pred             CCHHH---HHHHHhHHhCcCCCHHHHHHHHCCCHh-HHHHHHHHHhhCCCEEEeecc------------------CCCCe
Confidence            55543   445555566679999999999999864 467889999999999865321                  13455


Q ss_pred             ceeeecCchhhchHHHHHH
Q 012112          445 AYFRLSDPEGFLLSNELIS  463 (471)
Q Consensus       445 ~~~~lt~~~G~~~~n~i~~  463 (471)
                      -.|+|| ++|..+.+.+..
T Consensus        90 ~~i~lT-~~G~~~~~~~~~  107 (138)
T d1jgsa_          90 VLVKLT-TGGAAICEQCHQ  107 (138)
T ss_dssp             EEEEEC-HHHHHHHHHHHH
T ss_pred             eEEEEC-HHHHHHHHHHHH
Confidence            679997 999999877654


No 11 
>d1qwga_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=90.79  E-value=1.2  Score=39.79  Aligned_cols=117  Identities=18%  Similarity=0.113  Sum_probs=85.1

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEe------cCCCCCHHHHHHHHHCCCCEEEEccCCCCHHH
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEM------DPGTFDARKMEELMDLGVNRVSLGVQAFQDEL  188 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~------~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~  188 (471)
                      ++.+-||+||-.+.+.+.+.+.++..+++ +    +.+..-.      .-...-++.++..++.|++.|.+.==|.    
T Consensus        39 ID~~K~g~Gt~~l~p~~~l~eKI~l~~~~-~----V~v~~GGtlfE~a~~qg~~~~y~~~~~~lGf~~iEiSdg~~----  109 (251)
T d1qwga_          39 IDFVKFGWGTSAVIDRDVVKEKINYYKDW-G----IKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSS----  109 (251)
T ss_dssp             CSEEEECTTGGGGSCHHHHHHHHHHHHTT-T----CEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSS----
T ss_pred             eeEEEecCceeeecCHHHHHHHHHHHHHc-C----CeEeCCcHHHHHHHHcCCHHHHHHHHHHcCCCEEEEcCCcc----
Confidence            78899999999999999999999988864 2    2222210      0112357999999999999987764443    


Q ss_pred             HHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCC------CCCHHHHHHHHHHHHhCCCCcEEE
Q 012112          189 LKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLP------HQTPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       189 L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlP------gqT~e~~~~~l~~~~~l~p~his~  249 (471)
                            ..+.++..+.++.+++.|+. |-.-  +|--      --+.+.|.+.++..++.|.++|-+
T Consensus       110 ------~i~~~~~~~~I~~~~~~G~~-V~~E--vG~K~~~~~~~~~~~~~i~~~~~~LeaGA~~Vii  167 (251)
T d1qwga_         110 ------DISLEERNNAIKRAKDNGFM-VLTE--VGKKMPDKDKQLTIDDRIKLINFDLDAGADYVII  167 (251)
T ss_dssp             ------CCCHHHHHHHHHHHHHTTCE-EEEE--ECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred             ------CCCHHHHHHHHHHHHhCCCE-Eeec--ccCCCCCCccccCHHHHHHHHHHHHHCCCceeEe
Confidence                  24566778899999999996 3322  2322      136899999999999999987744


No 12 
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=90.68  E-value=0.24  Score=39.98  Aligned_cols=73  Identities=10%  Similarity=0.048  Sum_probs=54.3

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCc
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDP  452 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~  452 (471)
                      -.++..|....|+...+++++.|.+-. .+...++.|++.||+....+.                  .+.|.-.|+|| +
T Consensus        33 ~~iL~~i~~~~~~t~~~la~~l~i~~~-tvs~~l~~L~~~gli~r~~~~------------------~D~R~~~i~LT-~   92 (139)
T d2a61a1          33 FDILQKIYFEGPKRPGELSVLLGVAKS-TVTGLVKRLEADGYLTRTPDP------------------ADRRAYFLVIT-R   92 (139)
T ss_dssp             HHHHHHHHHHCCBCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEEET------------------TEEEEEEEEEC-H
T ss_pred             HHHHHHHHHcCCCCHHHHHHHhCCCcc-cchHHHHHHHhcCeeeeeecc------------------CCCCeEEEEEC-H
Confidence            344555556678999999999999865 467889999999999865321                  13455579997 9


Q ss_pred             hhhchHHHHHHHH
Q 012112          453 EGFLLSNELISHA  465 (471)
Q Consensus       453 ~G~~~~n~i~~~~  465 (471)
                      +|..+...+...+
T Consensus        93 ~G~~~~~~~~~~~  105 (139)
T d2a61a1          93 KGEEVIEKVIERR  105 (139)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999888774443


No 13 
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=90.59  E-value=0.4  Score=38.79  Aligned_cols=78  Identities=13%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             CCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhccccc
Q 012112          365 IDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRL  444 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  444 (471)
                      ++..+   ..++.-|....|+...++.+..+.+-. .+...++.|++.|||....+.                  -..|.
T Consensus        34 lt~~q---~~vL~~l~~~~~~t~~~la~~l~~~~~-~vsr~l~~L~~~G~v~r~~~~------------------~D~R~   91 (141)
T d1lnwa_          34 LTPPD---VHVLKLIDEQRGLNLQDLGRQMCRDKA-LITRKIRELEGRNLVRRERNP------------------SDQRS   91 (141)
T ss_dssp             CCHHH---HHHHHHHHSSTTCBHHHHHHHTTCCHH-HHHHHHHHHHHTTSEEEEECS------------------SSSSS
T ss_pred             CCHHH---HHHHHHHHHCCCCCHHHHHHHHCccHh-HHHHHHHHHHHhhceeeeccC------------------CCCcc
Confidence            55543   345555566788999999999999864 577889999999999865421                  12455


Q ss_pred             ceeeecCchhhchHHHHHHHH
Q 012112          445 AYFRLSDPEGFLLSNELISHA  465 (471)
Q Consensus       445 ~~~~lt~~~G~~~~n~i~~~~  465 (471)
                      -.+.|| ++|..+.+.+...+
T Consensus        92 ~~l~lT-~~G~~~~~~~~~~~  111 (141)
T d1lnwa_          92 FQLFLT-DEGLAIHQHAEAIM  111 (141)
T ss_dssp             EEEEEC-HHHHHHHHHHHHHH
T ss_pred             hhhccC-HHHHHHHHHHHHHH
Confidence            579997 99999888765443


No 14 
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=89.49  E-value=0.23  Score=38.97  Aligned_cols=66  Identities=14%  Similarity=-0.020  Sum_probs=51.4

Q ss_pred             CCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHHH
Q 012112          384 GVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELIS  463 (471)
Q Consensus       384 gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~~  463 (471)
                      ++...++.+..+.+-. .....++.|++.||+....+.                  .+.|.-+|.|| ++|..+.++++.
T Consensus        49 ~~t~~~la~~l~~~~~-tvs~~i~~Le~~gli~r~~~~------------------~D~R~~~i~LT-~~G~~~~~~~~~  108 (115)
T d2frha1          49 EYYLKDIINHLNYKQP-QVVKAVKILSQEDYFDKKRNE------------------HDERTVLILVN-AQQRKKIESLLS  108 (115)
T ss_dssp             EEEHHHHHHHSSSHHH-HHHHHHHHHHHTTSSCCBCCS------------------SSSCCCEEECC-SHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCHh-HHHHHHHHHHhhhhheeeecc------------------cCCceEEEEEC-HHHHHHHHHHHH
Confidence            4889999999988753 467789999999999765321                  24556689997 999999999988


Q ss_pred             HHHhcc
Q 012112          464 HAFGVI  469 (471)
Q Consensus       464 ~~~~~~  469 (471)
                      ++-..|
T Consensus       109 ~~~~~i  114 (115)
T d2frha1         109 RVNKRI  114 (115)
T ss_dssp             HHHHHH
T ss_pred             HHHhhc
Confidence            776544


No 15 
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.89  E-value=0.58  Score=45.01  Aligned_cols=119  Identities=13%  Similarity=0.022  Sum_probs=69.4

Q ss_pred             CCCHHHHHHHHHCCCCEEEEc--cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC----------
Q 012112          160 TFDARKMEELMDLGVNRVSLG--VQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ----------  227 (471)
Q Consensus       160 ~l~~e~l~~l~~~GvnrvsiG--vQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq----------  227 (471)
                      -+|++.++.|+++|+|.|-|.  -..+.+..-...-.....+.+.++|+.++++|+. |-+|+- |+||-          
T Consensus        73 ~ite~D~~~i~~~G~N~VRiPi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gl~-VilDlH-~~pG~~~~~~~~~~~  150 (408)
T d1h4pa_          73 FYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLK-VWVDLH-GAAGSQNGFDNSGLR  150 (408)
T ss_dssp             HSCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCE-EEEEEE-ECTTCSSCCGGGSST
T ss_pred             cCCHHHHHHHHHCCCCEEEEeccHHHhcCCCCCCCcChhHHHHHHHHHHHHHHCCCE-EEEEeC-CCCCCCcCCCCCCcc
Confidence            479999999999999965554  3444321111111122356688999999999997 889964 55651          


Q ss_pred             ------CHHHHH---HHHHHHHh-CCC----CcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 012112          228 ------TPQMWE---ESLRRTVG-AQP----KHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSS  290 (471)
Q Consensus       228 ------T~e~~~---~~l~~~~~-l~p----~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~  290 (471)
                            +.+..+   +.++.+.+ +.-    +.|..|.+.-||..+...          ..+.....|..+.+...+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~ia~r~~~~~~~~~v~g~el~NEP~~~~~~----------~~~~~~~~~~~~~~~iR~  217 (408)
T d1h4pa_         151 DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLD----------MDKMKNDYLAPAYEYLRN  217 (408)
T ss_dssp             TCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSCCCGGGSC----------HHHHHHHTHHHHHHHHHH
T ss_pred             cccccCCchHHHHHHHHHHHHHHHhcccccccceeeeecccCccccccc----------hHHHHHHHHHHHHHHHHh
Confidence                  123333   33343332 331    347778888888543211          123344455666666654


No 16 
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=88.86  E-value=0.81  Score=36.45  Aligned_cols=65  Identities=17%  Similarity=0.133  Sum_probs=50.4

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHH
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNEL  461 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i  461 (471)
                      ..|+...++.+.++.+-. .+...+++|++.|||....+.                  ...|.-.|+|| ++|..+.+.+
T Consensus        41 ~~~~t~~~la~~~~~~~~-~vs~~v~~L~~~gli~r~~~~------------------~D~R~~~i~lT-~~G~~~~~~~  100 (137)
T d2fbha1          41 RDSPTQRELAQSVGVEGP-TLARLLDGLESQGLVRRLAVA------------------EDRRAKHIVLT-PKADVLIADI  100 (137)
T ss_dssp             SSCCBHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEECCB------------------TTBCSCEEEEC-TTHHHHHHHH
T ss_pred             CCCCcHHHHHHHHCCCHH-HHHHHHHHHHHcCCccccCCC------------------CCCCchhhhcC-HHHHHHHHHH
Confidence            357999999999999854 477899999999999876421                  13455679997 9999998887


Q ss_pred             HHHHH
Q 012112          462 ISHAF  466 (471)
Q Consensus       462 ~~~~~  466 (471)
                      ...+.
T Consensus       101 ~~~~~  105 (137)
T d2fbha1         101 EAIAA  105 (137)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55443


No 17 
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=88.19  E-value=0.81  Score=36.33  Aligned_cols=65  Identities=11%  Similarity=-0.010  Sum_probs=49.8

Q ss_pred             CCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHH
Q 012112          383 RGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELI  462 (471)
Q Consensus       383 ~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~  462 (471)
                      .++...++.+..|.+-. .....++.|++.||+....+.                  ...|.-.|+|| ++|..+...+.
T Consensus        44 ~~it~~ela~~~~~~~~-~vs~~l~~L~~~g~v~r~~~~------------------~D~R~~~i~lT-~~G~~~~~~~~  103 (135)
T d3broa1          44 KEVLQRDLESEFSIKSS-TATVLLQRMEIKKLLYRKVSG------------------KDSRQKCLKLT-KKANKLETIIL  103 (135)
T ss_dssp             SCCBHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEECS------------------SCTTSEEEEEC-HHHHTTHHHHH
T ss_pred             CCCCHHHHHHHHCcCHh-HHHHHHHHHHHHHHHHHHhhh------------------hhhhhhhhccc-HHHHHHHHHHH
Confidence            44999999999999864 456889999999999765321                  13445579997 99999998886


Q ss_pred             HHHHh
Q 012112          463 SHAFG  467 (471)
Q Consensus       463 ~~~~~  467 (471)
                      ..+-.
T Consensus       104 ~~~~~  108 (135)
T d3broa1         104 SYMDS  108 (135)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65543


No 18 
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=88.16  E-value=0.94  Score=40.40  Aligned_cols=119  Identities=13%  Similarity=0.109  Sum_probs=76.3

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCH-------HHHHHH
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTP-------QMWEES  235 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~-------e~~~~~  235 (471)
                      ++.++..+++|+..|.+-.....+.    .....+.+   +..+.+.+.|+..+++..+.++.....       +.+++.
T Consensus        17 ~~~l~~a~~~Gf~~IEl~~~~~~~~----~~~~~~~~---~l~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (278)
T d1i60a_          17 KLDLELCEKHGYDYIEIRTMDKLPE----YLKDHSLD---DLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGM   89 (278)
T ss_dssp             HHHHHHHHHTTCSEEEEETTTHHHH----HTTSSCHH---HHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCcCEEEeCCcccccc----ccCcccHH---HHHHHHHHcCCcEEEEecCCCCCCCCHHHHHHHHHHHHHH
Confidence            6889999999999999854432222    22233344   455677888998888988888877543       455667


Q ss_pred             HHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCc-eecc
Q 012112          236 LRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYR-HYEI  298 (471)
Q Consensus       236 l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~-~yei  298 (471)
                      ++.+..++.+.|.+.+.....+....+          ..+...+.+..+.+.+++.|.. -+|.
T Consensus        90 i~~a~~lG~~~i~~~~~~~~~~~~~~~----------~~~~~~~~l~~l~~~a~~~Gv~l~lE~  143 (278)
T d1i60a_          90 METCKTLGVKYVVAVPLVTEQKIVKEE----------IKKSSVDVLTELSDIAEPYGVKIALEF  143 (278)
T ss_dssp             HHHHHHHTCCEEEEECCBCSSCCCHHH----------HHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred             HHHHHHcCCCccccccccCCCCCCHHH----------HHHHHHHHHHHHHHHHHHhCCeeeeee
Confidence            777888999988666432211110000          0134456677888888899974 3443


No 19 
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=88.11  E-value=0.71  Score=36.96  Aligned_cols=71  Identities=10%  Similarity=0.074  Sum_probs=49.4

Q ss_pred             HHHhcc-ccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCch
Q 012112          375 LMLSFR-TARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPE  453 (471)
Q Consensus       375 ~~~~Lr-~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~  453 (471)
                      ++..|. ...|+...++.+.++.+-. .+...++.|++.|||....+.                  ...|.-.|+|| ++
T Consensus        36 ~L~~l~~~~~~~t~~~la~~l~i~~~-~vs~~l~~L~~~glI~~~~~~------------------~D~R~~~l~lT-~~   95 (140)
T d3deua1          36 TLHNIHQLPPDQSQIQLAKAIGIEQP-SLVRTLDQLEDKGLISRQTCA------------------SDRRAKRIKLT-EK   95 (140)
T ss_dssp             HHHHHHHSCSSEEHHHHHHHHTSCHH-HHHHHHHHHHHTTSEEEC--------------------------CEEEEC-GG
T ss_pred             HHHHHHHcCCCccHHHHHHHHCCCHh-HHHHHHHHHHhCCCEEecccC------------------CCCCceeeEEC-HH
Confidence            334443 3457999999999999864 467899999999999864321                  23556689997 99


Q ss_pred             hhchHHHHHHHH
Q 012112          454 GFLLSNELISHA  465 (471)
Q Consensus       454 G~~~~n~i~~~~  465 (471)
                      |+.+.+.+...+
T Consensus        96 G~~~~~~~~~~~  107 (140)
T d3deua1          96 AEPLIAEMEEVI  107 (140)
T ss_dssp             GHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999998875543


No 20 
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=87.99  E-value=0.5  Score=37.60  Aligned_cols=70  Identities=14%  Similarity=0.100  Sum_probs=53.7

Q ss_pred             cccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHH
Q 012112          380 RTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSN  459 (471)
Q Consensus       380 r~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n  459 (471)
                      ....|+...++.+..|.+-. .....+++|++.||+....+                  ..+.|.-+|.|| ++|..+.+
T Consensus        45 ~~~~~~~~~~ia~~l~~~~~-~vs~~v~~L~~~glV~r~~~------------------~~D~R~v~i~LT-~~G~~~~~  104 (125)
T d1p4xa2          45 QNKNIVLLKDLIETIHHKYP-QTVRALNNLKKQGYLIKERS------------------TEDERKILIHMD-DAQQDHAE  104 (125)
T ss_dssp             TTTCCEEHHHHHHHSSSCHH-HHHHHHHHHHHHTSSEEEEC------------------SSSTTCEEEECC-HHHHHHHH
T ss_pred             ccCCCccHHHHHHHHCCCcc-hHHHHHHHHHhccCEeeeec------------------CCCCCeEEEEEC-HHHHHHHH
Confidence            33457899999999998864 46778999999999976532                  124566689997 99999999


Q ss_pred             HHHHHHHhcc
Q 012112          460 ELISHAFGVI  469 (471)
Q Consensus       460 ~i~~~~~~~~  469 (471)
                      +++..+=..+
T Consensus       105 ~l~~~~~~~i  114 (125)
T d1p4xa2         105 QLLAQVNQLL  114 (125)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
Confidence            9887765443


No 21 
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=87.58  E-value=0.48  Score=38.23  Aligned_cols=71  Identities=10%  Similarity=0.128  Sum_probs=53.4

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCch
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPE  453 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~  453 (471)
                      .++..|....|+...++++..+.+-. .....++.|++.|||....+.                  ...|.-+|+|| ++
T Consensus        39 ~iL~~l~~~~~~t~~~la~~~~i~~~-~vs~~l~~L~~~glv~r~~~~------------------~D~R~~~v~lT-~~   98 (143)
T d1s3ja_          39 FVLASLKKHGSLKVSEIAERMEVKPS-AVTLMADRLEQKNLIARTHNT------------------KDRRVIDLSLT-DE   98 (143)
T ss_dssp             HHHHHHHHHSEEEHHHHHHHHTSCHH-HHHHHHHHHHHTTSEEEEECS------------------SCTTSEEEEEC-HH
T ss_pred             HHHHHHHHCCCCCHHHHHHHHCcCHH-HHHHHHHHHHHhhhheeeeec------------------CCCCceEEEEC-HH
Confidence            44455555678999999999999854 467889999999999865321                  13455689997 99


Q ss_pred             hhchHHHHHHH
Q 012112          454 GFLLSNELISH  464 (471)
Q Consensus       454 G~~~~n~i~~~  464 (471)
                      |..+.+.+...
T Consensus        99 G~~~~~~~~~~  109 (143)
T d1s3ja_          99 GDIKFEEVLAG  109 (143)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998876443


No 22 
>d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]}
Probab=87.11  E-value=1.2  Score=40.36  Aligned_cols=128  Identities=9%  Similarity=0.027  Sum_probs=75.0

Q ss_pred             CCCCHHHHHHHHHCCCCEEEE--ccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC---------
Q 012112          159 GTFDARKMEELMDLGVNRVSL--GVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ---------  227 (471)
Q Consensus       159 ~~l~~e~l~~l~~~Gvnrvsi--GvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq---------  227 (471)
                      ..++++.++.|+++|+|-|-|  +-+-+.++.--..-.....+.+.++|+.++++|+. |-+|+- +.||.         
T Consensus        19 ~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~-vildlH-~~pg~~~~~~~~~~   96 (325)
T d1vjza_          19 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIH-ICISLH-RAPGYSVNKEVEEK   96 (325)
T ss_dssp             CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCE-EEEEEE-EETTEESCTTSCCS
T ss_pred             CCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCc-EEEeec-cccccccCcccccc
Confidence            346899999999999995555  44444332100000112367788999999999997 778774 23321         


Q ss_pred             --------CHHHHHHHHHHHHh-C--CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          228 --------TPQMWEESLRRTVG-A--QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       228 --------T~e~~~~~l~~~~~-l--~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                              +.+.+......+.+ +  ....|-.|.+.-||.....        ..+..+....++..+.+.+.+.+-.+.
T Consensus        97 ~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~--------~~~~~~~~~~~~~~~~~~ir~~~p~~~  168 (325)
T d1vjza_          97 TNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDP--------QIMSVEDHNSLIKRTITEIRKIDPERL  168 (325)
T ss_dssp             SCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBT--------TTBCHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred             cccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCcc--------ccchhhhhhhHHHHHHHHHhccCCCcE
Confidence                    01122222222221 2  2344667888888854321        123456666778888888887666543


No 23 
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=86.98  E-value=0.27  Score=39.51  Aligned_cols=70  Identities=11%  Similarity=0.076  Sum_probs=53.1

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCc
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDP  452 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~  452 (471)
                      ..++.-|....|+...++.+..|.+-. .....++.|++.||++...+.                  .+.|.-++.|| +
T Consensus        37 ~~vL~~i~~~~~~t~~~la~~l~~~~~-~~s~~l~~L~~~Gli~r~~~~------------------~D~R~~~l~lT-~   96 (136)
T d2bv6a1          37 FLVLTILWDESPVNVKKVVTELALDTG-TVSPLLKRMEQVDLIKRERSE------------------VDQREVFIHLT-D   96 (136)
T ss_dssp             HHHHHHHHHSSEEEHHHHHHHTTCCTT-THHHHHHHHHHTTSEEEEECS------------------SSTTCEEEEEC-H
T ss_pred             HHHHHHHHcCCCCCHHHHHHHHCCCHh-HHHHHHHHHHHCCCEEEeecC------------------CcccchhhccC-H
Confidence            345556666789999999999998853 467889999999999865321                  23455689997 9


Q ss_pred             hhhchHHHHH
Q 012112          453 EGFLLSNELI  462 (471)
Q Consensus       453 ~G~~~~n~i~  462 (471)
                      +|..+.+.+.
T Consensus        97 ~G~~~~~~~~  106 (136)
T d2bv6a1          97 KSETIRPELS  106 (136)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHH
Confidence            9998877653


No 24 
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=86.68  E-value=0.49  Score=39.46  Aligned_cols=78  Identities=14%  Similarity=0.114  Sum_probs=54.8

Q ss_pred             CCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhccccc
Q 012112          365 IDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRL  444 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  444 (471)
                      ++..+.   .++.-|....|+...++.+..+.+-. .....+++|++.|||....+.                  .+.|.
T Consensus        39 Lt~~q~---~vL~~l~~~~~~t~~~la~~~~l~~~-tvs~~i~rL~~~gli~r~~~~------------------~D~R~   96 (162)
T d2fxaa1          39 LNINEH---HILWIAYQLNGASISEIAKFGVMHVS-TAFNFSKKLEERGYLRFSKRL------------------NDKRN   96 (162)
T ss_dssp             CCHHHH---HHHHHHHHHTSEEHHHHHHHTTCCHH-HHHHHHHHHHHHTSEEEECC------------------------
T ss_pred             CCHHHH---HHHhhhccCCCcCHHHHHHHHcCCch-hhHHHHHHHHHCCCceeeccc------------------ccCee
Confidence            555443   34455556678999999999998854 567889999999999865421                  24566


Q ss_pred             ceeeecCchhhchHHHHHHHH
Q 012112          445 AYFRLSDPEGFLLSNELISHA  465 (471)
Q Consensus       445 ~~~~lt~~~G~~~~n~i~~~~  465 (471)
                      -+++|| ++|..+.+++...+
T Consensus        97 ~~l~lT-~~G~~~~~~~~~~~  116 (162)
T d2fxaa1          97 TYVQLT-EEGTEVFWSLLEEF  116 (162)
T ss_dssp             CEEEEC-HHHHHHHHHHHHHC
T ss_pred             eeeccC-HhHHHHHHHHHHHH
Confidence            689997 99999988775543


No 25 
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]}
Probab=86.37  E-value=1.3  Score=41.97  Aligned_cols=122  Identities=16%  Similarity=0.104  Sum_probs=75.7

Q ss_pred             CCCHHHHHHHHHCCCCEEEEcc--CCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC----------
Q 012112          160 TFDARKMEELMDLGVNRVSLGV--QAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ----------  227 (471)
Q Consensus       160 ~l~~e~l~~l~~~GvnrvsiGv--QS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq----------  227 (471)
                      -+|++.++.|+++|+|.|-|.|  ..+.+.--... .....+.+.++|+.++++|+. |-+|+-. .||.          
T Consensus        68 ~it~~D~~~i~~~G~N~VRiPv~~~~~~~~~~~~~-~~~~~~~ld~~i~~a~~~gl~-VilDlH~-~pg~~~~~~~~g~~  144 (394)
T d2pb1a1          68 WITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPY-VQGQVQYLEKALGWARKNNIR-VWIDLHG-APGSQNGFDNSGLR  144 (394)
T ss_dssp             SSCHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCC-CCCHHHHHHHHHHHHHHTTCE-EEEEEEE-CTTCSSCCGGGSST
T ss_pred             cCCHHHHHHHHHCCCCEEEEEecHHHhcCCCCCcc-chhHHHHHHHHHHHHHHCCcE-EEEEeec-cCCcccCcCCcCcc
Confidence            5799999999999999655544  44422100000 011367788999999999997 8899753 3331          


Q ss_pred             ------C---HHHHHHHHHHHHh-CC----CCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q 012112          228 ------T---PQMWEESLRRTVG-AQ----PKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGY  293 (471)
Q Consensus       228 ------T---~e~~~~~l~~~~~-l~----p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy  293 (471)
                            +   .+.+.+.++.+.+ +.    .+.|..|.+.-||..+.           ...+...+.|..+.+..++.+=
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~el~NEP~~~~-----------~~~~~~~~~~~~~~~~IR~~~~  213 (394)
T d2pb1a1         145 DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPV-----------LNMDKLKQFFLDGYNSLRQTGS  213 (394)
T ss_dssp             TCCCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGG-----------SCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CccccccHHHHHHHHHHHHHHHHHHccCCCCCceEEEeecccCCccc-----------ccHHHHHHHHHHHHHHHHHhCC
Confidence                  1   2233334444333 22    13577888888875331           2345667788888888888764


Q ss_pred             ce
Q 012112          294 RH  295 (471)
Q Consensus       294 ~~  295 (471)
                      .+
T Consensus       214 ~~  215 (394)
T d2pb1a1         214 VT  215 (394)
T ss_dssp             CC
T ss_pred             CC
Confidence            43


No 26 
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.13  E-value=0.089  Score=30.07  Aligned_cols=11  Identities=36%  Similarity=1.111  Sum_probs=9.2

Q ss_pred             CcCCcCCCCCc
Q 012112           64 RKRCHYCDFPI   74 (471)
Q Consensus        64 ~~~C~yC~f~~   74 (471)
                      |++|.||+|..
T Consensus         2 PFkC~~CsFDt   12 (29)
T d1x5wa2           2 PFKCNYCSFDT   12 (29)
T ss_dssp             SEECSSSSCEE
T ss_pred             Ccccceecccc
Confidence            67999999964


No 27 
>d2v7fa1 a.4.5.84 (A:2-150) Ribosomal protein S19e {Pyrococcus abyssi [TaxId: 29292]}
Probab=86.03  E-value=2  Score=34.93  Aligned_cols=71  Identities=13%  Similarity=0.157  Sum_probs=50.8

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCCh-------------HHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhc
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSL-------------VHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKI  440 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~-------------~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~  440 (471)
                      .|+..+-+..++-...+...||..-             ...+...|++|++.||++...++                   
T Consensus        56 SilRkiY~~gpvGv~~Lr~~YGg~k~rG~~P~h~~~~Sg~iiR~~LQqLE~~glVek~~~~-------------------  116 (149)
T d2v7fa1          56 SILRRVYLDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFVEKVPGK-------------------  116 (149)
T ss_dssp             HHHHHHHHHCSBCHHHHHHHHCC----CCCTTSCCCHHHHHHHHHHHHHHHTTSEEEETTT-------------------
T ss_pred             HHHHHHHHcCCccHHHHHHHHCCCCCCCCCCCCcCCCccHHHHHHHHHHHhCCCeeEcCCC-------------------
Confidence            3444444567888899999887531             23456789999999999865322                   


Q ss_pred             ccccceeeecCchhhchHHHHHHHHHhcc
Q 012112          441 GNRLAYFRLSDPEGFLLSNELISHAFGVI  469 (471)
Q Consensus       441 ~~~~~~~~lt~~~G~~~~n~i~~~~~~~~  469 (471)
                       .|    +|| ++|+-+.|.|..+.+..+
T Consensus       117 -GR----~lT-~~G~~~LD~iA~~v~~~~  139 (149)
T d2v7fa1         117 -GR----VIT-PKGRSFLDKIATELKKEL  139 (149)
T ss_dssp             -EE----EEC-HHHHHHHHHHHHHHHHHH
T ss_pred             -Cc----EEC-HHHHHHHHHHHHHHHHHH
Confidence             23    786 999999999988876543


No 28 
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=85.81  E-value=0.92  Score=34.13  Aligned_cols=71  Identities=10%  Similarity=0.058  Sum_probs=50.6

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCc
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDP  452 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~  452 (471)
                      -.++.-|....+++..++++.+|.+-. .+...+..|++.||+....+.                  .+.|.-+++|| +
T Consensus        19 ~~IL~~L~~~~~~~~~eLa~~l~is~~-~vs~~l~~L~~~glV~~~~~~------------------~d~r~~~~~LT-~   78 (100)
T d1ub9a_          19 LGIMIFLLPRRKAPFSQIQKVLDLTPG-NLDSHIRVLERNGLVKTYKVI------------------ADRPRTVVEIT-D   78 (100)
T ss_dssp             HHHHHHHHHHSEEEHHHHHHHTTCCHH-HHHHHHHHHHHTTSEEEEEEC------------------SSSCEEEEEEC-H
T ss_pred             HHHHHHhccCCCeeHHHHHHHHhhccc-cccHHHHHHhhhceeEEEEcC------------------cCCccccccCC-H
Confidence            345555545567999999999999864 467889999999999864211                  12334468997 9


Q ss_pred             hhhchHHHHHH
Q 012112          453 EGFLLSNELIS  463 (471)
Q Consensus       453 ~G~~~~n~i~~  463 (471)
                      +|......++.
T Consensus        79 ~G~~~~~~~~~   89 (100)
T d1ub9a_          79 FGMEEAKRFLS   89 (100)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99877666543


No 29 
>d2p8ta1 a.4.5.72 (A:14-82) Hypothetical protein PH0730 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=83.85  E-value=2  Score=30.32  Aligned_cols=54  Identities=9%  Similarity=0.058  Sum_probs=43.2

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHH
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNEL  461 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i  461 (471)
                      .+.|-...+++..|..- ..+...++.|.++||+.....                         ...|| ++|..+.+.+
T Consensus        15 ~qPiGRr~La~~L~l~E-r~vRte~~~Lk~~gLI~~~~~-------------------------Gm~lT-e~G~~~l~~L   67 (69)
T d2p8ta1          15 KEPLGRKQISERLELGE-GSVRTLLRKLSHLDIIRSKQR-------------------------GHFLT-LKGKEIRDKL   67 (69)
T ss_dssp             TSCBCHHHHHHHHTCCH-HHHHHHHHHHHHTTSEEEC---------------------------CEEEC-HHHHHHHHHH
T ss_pred             cCCccHHHHHHHcCCcH-HHHHHHHHHHHHCCCeeeeCC-------------------------CCEEC-HhHHHHHHHH
Confidence            47899999999988874 357889999999999987431                         36886 9999998877


Q ss_pred             H
Q 012112          462 I  462 (471)
Q Consensus       462 ~  462 (471)
                      +
T Consensus        68 ~   68 (69)
T d2p8ta1          68 L   68 (69)
T ss_dssp             H
T ss_pred             h
Confidence            5


No 30 
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]}
Probab=83.69  E-value=2.9  Score=39.28  Aligned_cols=132  Identities=11%  Similarity=0.073  Sum_probs=78.7

Q ss_pred             CCHHHHHHHHHCCCCEEEEcc--CCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCC--------------
Q 012112          161 FDARKMEELMDLGVNRVSLGV--QAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSL--------------  224 (471)
Q Consensus       161 l~~e~l~~l~~~GvnrvsiGv--QS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl--------------  224 (471)
                      ...+.++.|+++|+|.|-|.|  .-.+.+.-....-..+.+.+.++++.++++|+. |-+||-+.=              
T Consensus        39 ~~~d~~~~lk~~G~n~VRl~vw~~~~~~~~~~~~~g~~~l~~~~~~~~~a~~~Gl~-v~ldlH~sd~wadp~~q~~p~~w  117 (387)
T d1ur4a_          39 KKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMK-LLADFHYSDFWADPAKQKAPKAW  117 (387)
T ss_dssp             CBCCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCE-EEEEECSSSSCCSSSCCCCCGGG
T ss_pred             CcccHHHHHHHcCCCEEEeecccCCcccccCcCCCccccHHHHHHHHHHHHHCCCE-EEEEeCCCCCCcCCCCCCCchhh
Confidence            456789999999999888877  111111111122345689999999999999997 899987521              


Q ss_pred             CCCCHHHHHHHHH--------HHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          225 PHQTPQMWEESLR--------RTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       225 PgqT~e~~~~~l~--------~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      ++.+.+++.+.+.        ..... ...+..+.+.=|+...+.        -..+.+...+++..+.+..++..=...
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~eigNE~~~~~~--------~~~~~~~~~~ll~~~~~avr~~dp~~~  188 (387)
T d1ur4a_         118 ANLNFEDKKTALYQYTKQSLKAMKAA-GIDIGMVQVGNETNGGLA--------GETDWAKMSQLFNAGSQAVRETDSNIL  188 (387)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHT-TCCEEEEEESSSCSSCBT--------TBCCHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred             hccchhHHHHHHHHHHHHHHHHHhhc-CCCccEEEEecCCCcCcc--------CcCCHHHHHHHHHHHHHHHHhcCCCce
Confidence            1223333222222        22222 345666776666643321        224567777788887777777654433


Q ss_pred             cccccc
Q 012112          297 EISSYG  302 (471)
Q Consensus       297 eis~fa  302 (471)
                      -+.+.+
T Consensus       189 vi~~~~  194 (387)
T d1ur4a_         189 VALHFT  194 (387)
T ss_dssp             EEEEEC
T ss_pred             EEEecc
Confidence            334433


No 31 
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
Probab=83.69  E-value=1.6  Score=39.13  Aligned_cols=88  Identities=10%  Similarity=0.175  Sum_probs=61.0

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEec--CCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHc
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMD--PGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSC  192 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~--P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l  192 (471)
                      ++.|++.+ |-..+.|.++.++++.+++.++  ++..+.+-+|  .+.-....+..+ ++|+++|.-.+-.+        
T Consensus       162 ~~~I~l~D-T~G~~~P~~v~~~v~~l~~~~~--~~~~i~~H~Hn~~g~a~an~l~A~-~~G~~~id~si~Gl--------  229 (289)
T d1nvma2         162 ATCIYMAD-SGGAMSMNDIRDRMRAFKAVLK--PETQVGMHAHHNLSLGVANSIVAV-EEGCDRVDASLAGM--------  229 (289)
T ss_dssp             CSEEEEEC-TTCCCCHHHHHHHHHHHHHHSC--TTSEEEEECBCTTSCHHHHHHHHH-HTTCCEEEEBGGGC--------
T ss_pred             ceeeeecc-hhhcccchhHHHHHHHHHHHhc--ccccceeeechHHHHHHHHHHHHH-HhCCcEeecccccc--------
Confidence            67899964 7777899999999999999874  3445666553  333344555555 78999997766654        


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCC
Q 012112          193 GRAHGLKEVYEAIEIVKLCGVE  214 (471)
Q Consensus       193 ~R~~t~~~~~~ai~~~~~~G~~  214 (471)
                      |+.......+..+..+++.|+.
T Consensus       230 G~~~GN~~tE~lv~~l~~~g~~  251 (289)
T d1nvma2         230 GAGAGNAPLEVFIAVAERLGWN  251 (289)
T ss_dssp             SSTTCBCBHHHHHHHHHHHTCB
T ss_pred             CCCCCCccHHHHHHHHHhcCCC
Confidence            5554444455667777788886


No 32 
>d2q02a1 c.1.15.4 (A:1-271) Putative cytoplasmic protein STM4435 {Salmonella typhimurium [TaxId: 90371]}
Probab=83.65  E-value=4  Score=35.86  Aligned_cols=127  Identities=13%  Similarity=0.127  Sum_probs=78.5

Q ss_pred             EEEEEe--cCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC-
Q 012112          151 EISMEM--DPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ-  227 (471)
Q Consensus       151 eitiE~--~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq-  227 (471)
                      .+++..  -|+.=-++.++..+++|++-|.+.......    .+....+.+++   -+.+++.|+.-+++.....+..- 
T Consensus         7 r~~~n~~~~p~l~lee~l~~a~~~G~dgiEl~~~~~~~----~~~~~~~~~~~---k~~l~~~gl~i~~l~~~~~~~~~~   79 (271)
T d2q02a1           7 RFCINRKIAPGLSIEAFFRLVKRLEFNKVELRNDMPSG----SVTDDLNYNQV---RNLAEKYGLEIVTINAVYPFNQLT   79 (271)
T ss_dssp             GEEEEGGGCTTSCHHHHHHHHHHTTCCEEEEETTSTTS----STTTTCCHHHH---HHHHHHTTCEEEEEEEETTTTSCC
T ss_pred             hHhhhhhhcCCCCHHHHHHHHHHhCCCEEEEecCcccc----cccccCCHHHH---HHHHHHcCCcEEEeecccccCCCC
Confidence            345443  354334688999999999999985332211    11122334443   45567889875566655555432 


Q ss_pred             --CHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCce-ecc
Q 012112          228 --TPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRH-YEI  298 (471)
Q Consensus       228 --T~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~-yei  298 (471)
                        ..+.+++.++.+.+++.++|.+.+...              -.....+...+.+..+.+..++.|..- +|.
T Consensus        80 ~~~~~~~~~~i~~a~~lG~~~v~~~~~~~--------------~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~  139 (271)
T d2q02a1          80 EEVVKKTEGLLRDAQGVGARALVLCPLND--------------GTIVPPEVTVEAIKRLSDLFARYDIQGLVEP  139 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSEEEECCCCS--------------SBCCCHHHHHHHHHHHHHHHHTTTCEEEECC
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEecCCC--------------CccchHHHHHHHHHHHHHHhccCCeEEEEee
Confidence              456677788888899999887643210              012345667788888899999988753 443


No 33 
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=82.25  E-value=0.37  Score=38.76  Aligned_cols=74  Identities=19%  Similarity=0.187  Sum_probs=54.6

Q ss_pred             CCHhhHHHHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhccccc
Q 012112          365 IDAKDLAMDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRL  444 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  444 (471)
                      ++..+   ..++..+....|+...++.+..|.+-. .....++.|++.||+....+.                  .+.|.
T Consensus        31 Lt~~q---~~vL~~l~~~~~~t~~~La~~~~i~~~-~vsr~i~~L~~~glv~r~~~~------------------~D~R~   88 (137)
T d1z91a1          31 ITYPQ---YLALLLLWEHETLTVKKMGEQLYLDSG-TLTPMLKRMEQQGLITRKRSE------------------EDERS   88 (137)
T ss_dssp             CCHHH---HHHHHHHHHHSEEEHHHHHHTTTCCHH-HHHHHHHHHHHHTSEECCBCS------------------SCTTS
T ss_pred             cCHHH---HHHHHHHHcCCCCCHHHHHHHHCcCHH-HHHHHHHHHhhccceEEeecC------------------CCCCe
Confidence            55543   445556666789999999999999864 467799999999999865321                  13455


Q ss_pred             ceeeecCchhhchHHHH
Q 012112          445 AYFRLSDPEGFLLSNEL  461 (471)
Q Consensus       445 ~~~~lt~~~G~~~~n~i  461 (471)
                      -.|+|| ++|..+...+
T Consensus        89 ~~i~lT-~~G~~~~~~~  104 (137)
T d1z91a1          89 VLISLT-EDGALLKEKA  104 (137)
T ss_dssp             BEEEEC-HHHHSGGGGT
T ss_pred             EEEEEC-HHHHHHHHHH
Confidence            679997 9999887653


No 34 
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=80.47  E-value=1.3  Score=34.92  Aligned_cols=63  Identities=14%  Similarity=0.105  Sum_probs=48.3

Q ss_pred             CCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHH
Q 012112          383 RGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELI  462 (471)
Q Consensus       383 ~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~  462 (471)
                      .++...++.++.+.+-. .....++.|++.|||....+.                  .+.|.=+|.|| ++|.-..+.+.
T Consensus        49 ~~~t~~eia~~~~~~~~-~vs~~l~~L~~~g~v~r~~~~------------------~D~R~~~i~lT-~~G~~~~~~~~  108 (125)
T d1p4xa1          49 NTLPFKKIVSDLCYKQS-DLVQHIKVLVKHSYISKVRSK------------------IDERNTYISIS-EEQREKIAERV  108 (125)
T ss_dssp             SEEEHHHHHHHSSSCGG-GTHHHHHHHHHTTSCEEEECS------------------SSTTSEEEECC-HHHHHHHHHHH
T ss_pred             CCcCHHHHHHHhCCCcc-hHHHHHHHHHHCCCceeeccc------------------CCCCeEEEEEC-HHHHHHHHHHH
Confidence            35889999999988753 356789999999999875321                  24566689997 99999888876


Q ss_pred             HHH
Q 012112          463 SHA  465 (471)
Q Consensus       463 ~~~  465 (471)
                      ..+
T Consensus       109 ~~~  111 (125)
T d1p4xa1         109 TLF  111 (125)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654


No 35 
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]}
Probab=80.44  E-value=8  Score=35.05  Aligned_cols=113  Identities=14%  Similarity=0.205  Sum_probs=67.7

Q ss_pred             CCHHHHHHHHHCCCCEEEEcc--CCCCHHHHHHcCCC-C---CHHHHHHHHHHHHHcCCCeeEeeeecCCCCC-------
Q 012112          161 FDARKMEELMDLGVNRVSLGV--QAFQDELLKSCGRA-H---GLKEVYEAIEIVKLCGVENWSLDLISSLPHQ-------  227 (471)
Q Consensus       161 l~~e~l~~l~~~GvnrvsiGv--QS~~d~~L~~l~R~-~---t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq-------  227 (471)
                      ++++.++.|+++|+|.|-|.+  +.+.+.    -+.. .   ..+.+.++|+.+++.|+. |-+|+- +.||.       
T Consensus        29 ~te~d~~~i~~~G~n~vRlpi~~~~~~~~----~~~~~~~~~~~~~ld~~v~~a~~~gi~-vild~H-~~p~~~~~~~~~  102 (340)
T d1ceoa_          29 ITEKDIETIAEAGFDHVRLPFDYPIIESD----DNVGEYKEDGLSYIDRCLEWCKKYNLG-LVLDMH-HAPGYRFQDFKT  102 (340)
T ss_dssp             SCHHHHHHHHHHTCCEEEEEEEGGGTBCS----SSTTCBCHHHHHHHHHHHHHHHHTTCE-EEEEEE-ECCC--------
T ss_pred             ccHHHHHHHHHcCCCEEEeecCHHHhccC----CCCCccCHHHHHHHHHHHHHHHHcCCE-EEEEec-CCCccccccccc
Confidence            578999999999999766644  322110    0000 0   135578899999999997 888874 34552       


Q ss_pred             -----CH---HHHHHHHHHHHh-CC-CCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q 012112          228 -----TP---QMWEESLRRTVG-AQ-PKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAG  292 (471)
Q Consensus       228 -----T~---e~~~~~l~~~~~-l~-p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~G  292 (471)
                           +.   +.+.+..+.+.+ ++ -..|-.|.+.-||..             ++.+...+++..+.+.+++..
T Consensus       103 ~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~-------------~~~~~~~~~~~~~~~aIR~~d  164 (340)
T d1ceoa_         103 STLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVE-------------PDSTRWNKLMLECIKAIREID  164 (340)
T ss_dssp             CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCC-------------SSSHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCC-------------CCHHHHHHHHHHHHHHHHhcC
Confidence                 22   233444444332 22 234556788777743             233455667777777777654


No 36 
>d1sr9a2 c.1.10.5 (A:61-370) 2-isopropylmalate synthase LeuA, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=78.84  E-value=13  Score=32.77  Aligned_cols=113  Identities=12%  Similarity=0.055  Sum_probs=76.3

Q ss_pred             CeeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEe--cCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHH
Q 012112          114 PLETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEM--DPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKS  191 (471)
Q Consensus       114 ~v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~--~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~  191 (471)
                      .++.+++.+ |...+.|.++.+++..+++.++-.....+.+-+  |.+.-....+..+ ++|+++|.-.+..        
T Consensus       185 g~~~i~l~D-t~G~~~P~~v~~~v~~~~~~~~~~~~i~i~~H~Hn~~Gla~AN~laA~-~aG~~~iD~si~G--------  254 (310)
T d1sr9a2         185 RPIIFNLPA-TVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGF-AAGADRIEGCLFG--------  254 (310)
T ss_dssp             BCEEEEEEE-SSCCSCHHHHHHHHHHHHHHSSSGGGEEEEEEEBCTTSCHHHHHHHHH-HTTCCEEEEBGGG--------
T ss_pred             CceEEeecc-cccccchhHHHHHHHHHHHhccCccceeeeeccccchhhhhHHHHHHH-hccCCEEecCCcc--------
Confidence            478898875 666789999999999999987532233344444  3333345555555 7899999887777        


Q ss_pred             cCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCC
Q 012112          192 CGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQ  243 (471)
Q Consensus       192 l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~  243 (471)
                      ||++...-..+..+..+++.|+. .++|      -+.+.++.+.++.+..+.
T Consensus       255 mG~~aGN~~tE~lv~~l~~~g~~-~~id------l~~L~~~~~~v~~~~~~~  299 (310)
T d1sr9a2         255 NGERTGNVCLVTLGLNLFSRGVD-PQID------FSNIDEIRRTVEYCNQLP  299 (310)
T ss_dssp             CSSTTCBCBHHHHHHHHHTTTCC-CSSC------CTTHHHHHHHHHHHHSCC
T ss_pred             cccccCChhHHHHHHHHHhcCCC-CCcC------HHHHHHHHHHHHHHhCCC
Confidence            46666555566667777788886 4443      356667777777766554


No 37 
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]}
Probab=78.81  E-value=20  Score=31.20  Aligned_cols=117  Identities=12%  Similarity=0.068  Sum_probs=76.0

Q ss_pred             CCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHH
Q 012112          161 FDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTV  240 (471)
Q Consensus       161 l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~  240 (471)
                      .+++.++.|++.|+|-|-+.+.-..      --.....+.+.+.++.|.+.|+. |-+|+-..-.++.........+...
T Consensus        33 ~~~~d~~~~~~~G~N~VRl~~~~~~------~~~~~~~~~ld~~v~~a~~~Gi~-vildlh~~~~~~~~~~~~~~~~~w~  105 (297)
T d1wkya2          33 QATTAIEGIANTGANTVRIVLSDGG------QWTKDDIQTVRNLISLAEDNNLV-AVLEVHDATGYDSIASLNRAVDYWI  105 (297)
T ss_dssp             GHHHHHHHHHTTTCSEEEEEECCSS------SSCCCCHHHHHHHHHHHHHTTCE-EEEEECTTTTCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCcEEEEeccCCC------ccCccHHHHHHHHHHHHHHCCCc-eEeeccccccccccccHHHHHHHHH
Confidence            3567899999999997666543210      01123467788899999999997 8899876555666666666555544


Q ss_pred             hC-----CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          241 GA-----QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       241 ~l-----~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      ++     +-+.|-.|.+.-||...            ...+...+.+..+.+..++.+-.+.
T Consensus       106 ~~a~~~~~~p~v~~~~l~NEp~~~------------~~~~~~~~~~~~~~~~IR~~d~~~~  154 (297)
T d1wkya2         106 EMRSALIGKEDTVIINIANEWFGS------------WDGAAWADGYKQAIPRLRNAGLNNT  154 (297)
T ss_dssp             HTGGGTTTCTTTEEEECCTTCCCS------------SCHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred             HHHHHhcCCCCEEEEecccccccc------------chhhhhhhhhhhhHHHHHhcCCCce
Confidence            33     22345556666665321            2344556777888888888887764


No 38 
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=78.78  E-value=3.3  Score=30.68  Aligned_cols=52  Identities=12%  Similarity=0.028  Sum_probs=39.5

Q ss_pred             CCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHH
Q 012112          383 RGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNEL  461 (471)
Q Consensus       383 ~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i  461 (471)
                      .|.....+-..-+.+.. .+.+-++.|++.|++...++                         ..++| ++|..+.+.+
T Consensus        17 ~g~~kT~i~~~aNLs~~-~~~kyl~~L~~~GLI~~~~~-------------------------~Y~iT-~kG~~~L~~~   68 (90)
T d1r7ja_          17 SGSPKTRIMYGANLSYA-LTGRYIKMLMDLEIIRQEGK-------------------------QYMLT-KKGEELLEDI   68 (90)
T ss_dssp             TCBCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEETT-------------------------EEEEC-HHHHHHHHHH
T ss_pred             CCCCccHHHHHcCCCHH-HHHHHHHHHHHCCCeeecCC-------------------------EEEEC-ccHHHHHHHH
Confidence            56677777777777753 46788999999999975432                         36886 9999998875


No 39 
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=77.07  E-value=1.2  Score=37.45  Aligned_cols=61  Identities=10%  Similarity=0.211  Sum_probs=47.4

Q ss_pred             CeeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCC
Q 012112          114 PLETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQ  185 (471)
Q Consensus       114 ~v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~  185 (471)
                      .++.|.+-.     ++|+++.+.++.++...+     .+.+|+. +.++.+.++.+++.|++.||+|-=+.+
T Consensus        99 ~~diImLDN-----~sp~~~k~~v~~~~~~~~-----~i~lEaS-GgI~~~ni~~ya~~GvD~IS~galt~s  159 (169)
T d1qpoa1          99 KPELILLDN-----FAVWQTQTAVQRRDSRAP-----TVMLESS-GGLSLQTAATYAETGVDYLAVGALTHS  159 (169)
T ss_dssp             CCSEEEEET-----CCHHHHHHHHHHHHHHCT-----TCEEEEE-SSCCTTTHHHHHHTTCSEEECGGGTSS
T ss_pred             CCcEEEecC-----cChHhHHHHHHHhhccCC-----eeEEEEe-CCCCHHHHHHHHHcCCCEEECCccccC
Confidence            366777752     588999999988876542     4677776 468999999999999999999975543


No 40 
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]}
Probab=76.76  E-value=24  Score=31.30  Aligned_cols=114  Identities=17%  Similarity=0.173  Sum_probs=73.9

Q ss_pred             CCHHHHHHHHHCCCCEEEEccC--CCCHHHHHHcCCCC---CHHHHHHHHHHHHHcCCCeeEeeeec-----CCCCCCHH
Q 012112          161 FDARKMEELMDLGVNRVSLGVQ--AFQDELLKSCGRAH---GLKEVYEAIEIVKLCGVENWSLDLIS-----SLPHQTPQ  230 (471)
Q Consensus       161 l~~e~l~~l~~~GvnrvsiGvQ--S~~d~~L~~l~R~~---t~~~~~~ai~~~~~~G~~~v~~DlI~-----GlPgqT~e  230 (471)
                      .+++.++.|++.|+|.|-|.|.  .+.+.   .-+...   ..+.+.++|+.+.++|+. |-+|+=-     +-+..+.+
T Consensus        32 ~t~~di~~l~~~G~N~VRlPv~~~~~~~~---~~~~~~~~~~~~~l~~~v~~a~~~gl~-vIlD~H~~~~~~~~~~~~~~  107 (305)
T d1h1na_          32 PDPNTIDTLISKGMNIFRVPFMMERLVPN---SMTGSPDPNYLADLIATVNAITQKGAY-AVVDPHNYGRYYNSIISSPS  107 (305)
T ss_dssp             CCHHHHHHHHHTTCCEEEEEECHHHHSCS---STTSCCCHHHHHHHHHHHHHHHHTTCE-EEEEECCTTEETTEECCCHH
T ss_pred             CCHHHHHHHHHCCCCEEEeeeeHHHhccC---CCCCccCHHHHHHHHHHHHHHHhcCCe-EEEecccCCcccccccccHH
Confidence            5899999999999997777652  11110   001111   245778899999999997 7777632     12334666


Q ss_pred             HHHHHHHHHHh-C-CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q 012112          231 MWEESLRRTVG-A-QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAG  292 (471)
Q Consensus       231 ~~~~~l~~~~~-l-~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~G  292 (471)
                      .+.+-...+.+ + .-++| .|.+.=||+.             .+.+...+++..+.+.+.+.|
T Consensus       108 ~~~~~W~~ia~~~~~~~~v-~~el~NEP~~-------------~~~~~w~~~~~~~~~~IR~~~  157 (305)
T d1h1na_         108 DFETFWKTVASQFASNPLV-IFDTDNEYHD-------------MDQTLVLNLNQAAIDGIRSAG  157 (305)
T ss_dssp             HHHHHHHHHHHTSTTCTTE-EEECCSCCCS-------------SCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCee-EEEeccCCCC-------------ccHHHHHHHHHHHHHHHHhcC
Confidence            66665555443 3 23456 5888888853             234556778888888888876


No 41 
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]}
Probab=73.93  E-value=5.4  Score=35.54  Aligned_cols=122  Identities=8%  Similarity=0.031  Sum_probs=82.4

Q ss_pred             CCCHHHHHHHHH-CCCCEE--EEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHH
Q 012112          160 TFDARKMEELMD-LGVNRV--SLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESL  236 (471)
Q Consensus       160 ~l~~e~l~~l~~-~Gvnrv--siGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l  236 (471)
                      ..+++.++.|++ .|+|-|  -|+.+.+++..... ......+.+.++++.+++.|+. |-+|+--.-+..+.+.+.+..
T Consensus        38 ~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~~~~~~-~~~~~l~~ld~~v~~a~~~gi~-vild~h~~~~~~~~~~~~~~w  115 (293)
T d1tvna1          38 FYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNF-DWEGNMSRLDTVVNAAIAEDMY-VIIDFHSHEAHTDQATAVRFF  115 (293)
T ss_dssp             GCSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTT-CHHHHHHHHHHHHHHHHHTTCE-EEEEEECSCGGGCHHHHHHHH
T ss_pred             ccCHHHHHHHHHhCCCcEEEEeccccccccccccc-CcHHHHHHHHHHHHHHHHcCCE-EEecCccCCCcccHHHHHHHH
Confidence            357888888874 699854  44666665532110 1112345677889999999997 889998877778888877777


Q ss_pred             HHHHhC--CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          237 RRTVGA--QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       237 ~~~~~l--~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      +.+.+.  +.++|. |.+.-||...-            ......++++.+.+.+++.+..+.
T Consensus       116 ~~~a~r~k~~~~V~-~el~NEP~~~~------------~~~~~~~~~~~~~~~Ir~~dp~~~  164 (293)
T d1tvna1         116 EDVATKYGQYDNVI-YEIYNEPLQIS------------WVNDIKPYAETVIDKIRAIDPDNL  164 (293)
T ss_dssp             HHHHHHHTTCTTEE-EECCSCCCSCC------------TTTTHHHHHHHHHHHHHTTCCSCE
T ss_pred             HHHHHHhCCCCeEE-EEEecccCCCC------------cHHHHHHHHHHHHHHHhhcCCCcE
Confidence            766552  345675 99988874321            112345678888888888887775


No 42 
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=73.91  E-value=1.5  Score=36.45  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=51.1

Q ss_pred             CCHhhHHHHHHHHhccc---cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcc
Q 012112          365 IDAKDLAMDVLMLSFRT---ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIG  441 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~---~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~  441 (471)
                      ++..+   ..++..|..   ..|+...++.++.|.+-. .+...++.|++.|||+...+.                  .+
T Consensus        60 Lt~~q---~~vL~~L~~~~~~~~lt~~eLa~~l~i~~~-tvsr~l~~Le~~GlV~r~~~~------------------~D  117 (172)
T d2fbka1          60 LNAAG---WDLLLTLYRSAPPEGLRPTELSALAAISGP-STSNRIVRLLEKGLIERREDE------------------RD  117 (172)
T ss_dssp             CCHHH---HHHHHHHHHHCCSSCBCHHHHHHHCSCCSG-GGSSHHHHHHHHTSEECCC----------------------
T ss_pred             CCHHH---HHHHHHHHhhCCCCCcCHHHHHHHHCcCHh-HHHHHHHHHHhCCCeeeeccc------------------cc
Confidence            55543   334444432   346899999999988753 345679999999999865321                  23


Q ss_pred             cccceeeecCchhhchHHHHHHHH
Q 012112          442 NRLAYFRLSDPEGFLLSNELISHA  465 (471)
Q Consensus       442 ~~~~~~~lt~~~G~~~~n~i~~~~  465 (471)
                      .|.-.|+|| ++|..+.+.+....
T Consensus       118 rR~~~i~LT-~~G~~l~~~~~~~~  140 (172)
T d2fbka1         118 RRSASIRLT-PQGRALVTHLLPAH  140 (172)
T ss_dssp             ---CCBEEC-HHHHHHHHHHHHHH
T ss_pred             hhhHHhhcC-HHHHHHHHHHHHHH
Confidence            455579997 99999998875443


No 43 
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=73.77  E-value=10  Score=33.35  Aligned_cols=85  Identities=16%  Similarity=0.138  Sum_probs=61.3

Q ss_pred             EEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHH----HcCCCeeEeeeecCCCC
Q 012112          151 EISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVK----LCGVENWSLDLISSLPH  226 (471)
Q Consensus       151 eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~----~~G~~~v~~DlI~GlPg  226 (471)
                      .|-+-.-|.+-+.+.|+.|.++|+|-+-|.+=..+.+            +..+.++.+|    +.|.. +.+.+=+-.|.
T Consensus         5 KIIaTiGPas~~~~~l~~li~aGvdv~RlN~SHg~~~------------~~~~~i~~ir~~~~~~~~~-~~I~~Dl~gp~   71 (246)
T d1e0ta2           5 KIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYA------------EHGQRIQNLRNVMSKTGKT-AAILLDTKGPA   71 (246)
T ss_dssp             EEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHH------------HHHHHHHHHHHHHHHHTCC-CEEEEECCCCS
T ss_pred             eEEEeeCCCcCCHHHHHHHHHCCCCEEEEECCCCCHH------------HHHHHHHHHHHHHHHcCCC-Ccccccccccc
Confidence            4555567889999999999999998777766555443            3333333333    34665 66766677788


Q ss_pred             CCHHHHHHHHHHHHhCCCCcEEE
Q 012112          227 QTPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       227 qT~e~~~~~l~~~~~l~p~his~  249 (471)
                      -|..+. ++++++.+.++|.|.+
T Consensus        72 ltekD~-~~i~~a~~~~vD~ial   93 (246)
T d1e0ta2          72 LAEKDK-QDLIFGCEQGVDFVAA   93 (246)
T ss_dssp             SCHHHH-HHHHHHHHHTCSEEEE
T ss_pred             cccCcc-hhhhHHHHcCCCEEEE
Confidence            888887 5789999999998754


No 44 
>d1rqba2 c.1.10.5 (A:4-306) Transcarboxylase 5S subunit, N-terminal domain {Propionibacterium freudenreichii shermanii [TaxId: 1752]}
Probab=73.32  E-value=3.5  Score=37.09  Aligned_cols=88  Identities=16%  Similarity=0.348  Sum_probs=60.8

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEec--CCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHc
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMD--PGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSC  192 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~--P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l  192 (471)
                      ++.|++++ |...+.|.++.++++.+++.++  ++.++.+-++  .+.-....+.++ ++|+++|.-.+--        |
T Consensus       175 ~~~i~l~D-T~G~~~P~~v~~li~~l~~~~~--~~i~i~~H~Hnd~Gla~AN~laA~-~aG~~~id~ti~G--------l  242 (303)
T d1rqba2         175 ADSIALKD-MAALLKPQPAYDIIKAIKDTYG--QKTQINLHCHSTTGVTEVSLMKAI-EAGVDVVDTAISS--------M  242 (303)
T ss_dssp             CSEEEEEE-TTCCCCHHHHHHHHHHHHHHHC--TTCCEEEEEBCTTSCHHHHHHHHH-HTTCSEEEEBCGG--------G
T ss_pred             CcEEeecC-ccchhhhHHHHHHHHHHHhhcC--CcccceeccCchHHHHHHHHHHHH-HcCCCEEEECCcc--------C
Confidence            67899975 7788899999999999999875  4456666663  333345566666 5799998776655        5


Q ss_pred             CCCCCHHHHHHHHHHHHHcCCC
Q 012112          193 GRAHGLKEVYEAIEIVKLCGVE  214 (471)
Q Consensus       193 ~R~~t~~~~~~ai~~~~~~G~~  214 (471)
                      |+.-..-..++.+..+++.|++
T Consensus       243 G~~~GN~~te~lv~~L~~~g~~  264 (303)
T d1rqba2         243 SLGPGHNPTESVAEMLEGTGYT  264 (303)
T ss_dssp             CSTTSBCBHHHHHHHTTTSSEE
T ss_pred             CCCCCCccHHHHHHHHHhcCCC
Confidence            6654444455556666666764


No 45 
>d2g0wa1 c.1.15.4 (A:10-284) Hypothetical protein Lmo2234 {Listeria monocytogenes [TaxId: 1639]}
Probab=72.32  E-value=12  Score=32.41  Aligned_cols=80  Identities=8%  Similarity=0.132  Sum_probs=42.3

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC------CHHHHHHHH
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ------TPQMWEESL  236 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq------T~e~~~~~l  236 (471)
                      +|.++..+++|++.|.+-..-    .........+.+   +..+.+.++|+.-.++....++...      +.+.+++.+
T Consensus        18 ee~l~~aa~~Gfd~iEl~~~~----~~~~~~~~~~~~---~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~~i   90 (275)
T d2g0wa1          18 PKRVKVAAENGFDGIGLRAEN----YVDALAAGLTDE---DMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTF   90 (275)
T ss_dssp             HHHHHHHHHTTCSEEEEEHHH----HHHHHHTTCCHH---HHHHHHHHTTCEEEEEECBCCCSSTTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCEEEEcccc----ccccccCcCCHH---HHHHHHHHcCCceEEEeeccccCCCchhHHHHHHHHHHHH
Confidence            577777777777777764321    111112223333   3345566677763344443333211      234566677


Q ss_pred             HHHHhCCCCcEEE
Q 012112          237 RRTVGAQPKHVSV  249 (471)
Q Consensus       237 ~~~~~l~p~his~  249 (471)
                      +.+..+++..|.+
T Consensus        91 ~~A~~lG~~~v~~  103 (275)
T d2g0wa1          91 HMARLFGVKHINC  103 (275)
T ss_dssp             HHHHHHTCCEEEE
T ss_pred             HHHHHhCCceEec
Confidence            7777777776644


No 46 
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]}
Probab=71.66  E-value=5.3  Score=35.58  Aligned_cols=120  Identities=12%  Similarity=0.053  Sum_probs=73.4

Q ss_pred             CCCHHHHHHHHH-CCCC--EEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHH
Q 012112          160 TFDARKMEELMD-LGVN--RVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESL  236 (471)
Q Consensus       160 ~l~~e~l~~l~~-~Gvn--rvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l  236 (471)
                      .++++.++.|++ .|+|  |+.++.+.......   ......+.+.++|+.+.+.|+- |-+|+.---++...+.+.+..
T Consensus        38 ~~~~~~~~~l~~~~G~N~vR~~~~~~~~~~~~~---~~~~~~~~ld~vv~~a~~~Giy-vild~h~~~~~~~~~~~~~~w  113 (291)
T d1egza_          38 FYTADTVASLKKDWKSSIVRAAMGVQESGGYLQ---DPAGNKAKVERVVDAAIANDMY-AIIGWHSHSAENNRSEAIRFF  113 (291)
T ss_dssp             GCSHHHHHHHHHTTCCCEEEEEEECSSTTSTTT---CHHHHHHHHHHHHHHHHHTTCE-EEEEEECSCGGGGHHHHHHHH
T ss_pred             ccCHHHHHHHHHhcCCCEEEEeccccccCCccc---CcHHHHHHHHHHHHHHHHCCCe-EeeeeccCCCcccHHHHHHHH
Confidence            468889999885 6998  66777664321000   0011245667889999999997 778887543344445554444


Q ss_pred             HHHHh-C-CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          237 RRTVG-A-QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       237 ~~~~~-l-~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      +.+.+ + +-++| +|.+.=||.....            .+.....++.+.+.+++.+-.+.
T Consensus       114 ~~la~ryk~~p~v-~~el~NEP~~~~~------------~~~~~~~~~~~~~~IR~~d~~~~  162 (291)
T d1egza_         114 QEMARKYGNKPNV-IYEIYNEPLQVSW------------SNTIKPYAEAVISAIRAIDPDNL  162 (291)
T ss_dssp             HHHHHHHTTSTTE-EEECCSCCCSCCT------------TTTHHHHHHHHHHHHHHHCSSSC
T ss_pred             HHHHHHhCCCcce-eeeeccCcCCCcc------------hhhHHHHHHHHHHHHHhcCCCcE
Confidence            44433 2 23457 5888888864321            12344577777788887776653


No 47 
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.65  E-value=12  Score=26.04  Aligned_cols=59  Identities=14%  Similarity=0.076  Sum_probs=45.9

Q ss_pred             ccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHH
Q 012112          381 TARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNE  460 (471)
Q Consensus       381 ~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~  460 (471)
                      ...++...++.+..|.+... .-..+..|++.||++.++ +                       +.++|+ ++-+.++..
T Consensus        17 ~~~~~s~~eia~~~~~~~st-~~rll~tL~~~g~l~~~~-~-----------------------g~y~lG-~~l~~lg~~   70 (75)
T d1mkma1          17 NPGDVSVSEIAEKFNMSVSN-AYKYMVVLEEKGFVLRKK-D-----------------------KRYVPG-YKLIEYGSF   70 (75)
T ss_dssp             CSSCBCHHHHHHHTTCCHHH-HHHHHHHHHHTTSEEECT-T-----------------------SCEEEC-THHHHHHHH
T ss_pred             CCCCCCHHHHHHHHCcCHHH-HHHHHHHHHHCCCEEECC-C-----------------------CCEeec-HHHHHHHHH
Confidence            34679999999999998654 456899999999998643 2                       247886 999999888


Q ss_pred             HHHHH
Q 012112          461 LISHA  465 (471)
Q Consensus       461 i~~~~  465 (471)
                      ++..|
T Consensus        71 ~l~~f   75 (75)
T d1mkma1          71 VLRRF   75 (75)
T ss_dssp             HHHHC
T ss_pred             HHhcC
Confidence            87654


No 48 
>d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]}
Probab=70.03  E-value=2.8  Score=39.13  Aligned_cols=125  Identities=11%  Similarity=0.040  Sum_probs=70.4

Q ss_pred             ecCCCCCHHHHHHHHHCCCCEEEEccC--C--------CCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC--
Q 012112          156 MDPGTFDARKMEELMDLGVNRVSLGVQ--A--------FQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS--  223 (471)
Q Consensus       156 ~~P~~l~~e~l~~l~~~GvnrvsiGvQ--S--------~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G--  223 (471)
                      .||. +|++.++.++++|+|.|-|+|-  .        .++..         .+.+.++|+.++++|+. |-+|+---  
T Consensus        58 gnp~-~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~~~i~~~~---------l~~v~~vV~~a~~~Gl~-VIldlHh~~~  126 (380)
T d1edga_          58 SGIK-TTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVW---------MNRVQEVVNYCIDNKMY-VILNTHHDVD  126 (380)
T ss_dssp             TCSC-CCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHH---------HHHHHHHHHHHHTTTCE-EEEECCSCBC
T ss_pred             CCcc-ccHHHHHHHHHcCCCEEEEcccHHHhcCCCCCccCHHH---------HHHHHHHHHHHHHcCCE-EEEecccCCC
Confidence            3663 7999999999999998888873  1        12222         34578899999999997 77877421  


Q ss_pred             -----CCC-CCHHH----HHHHHHHH-HhCC--CCcEEEEeccccCCChhhhcccCCCCCCCCH------HHHHHHHHHH
Q 012112          224 -----LPH-QTPQM----WEESLRRT-VGAQ--PKHVSVYDLQVEQGTKFGILYTPGEFPLPTE------TQSANFYRMA  284 (471)
Q Consensus       224 -----lPg-qT~e~----~~~~l~~~-~~l~--p~his~y~l~~~pgT~l~~~~~~g~~~~p~~------~~~~~~~~~~  284 (471)
                           .|+ .+.+.    +.+..+.+ .+++  ++++ +|.+.-||.-........+  .....      +...+++..+
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~W~qiA~~fkd~~~~l-~fel~NEP~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~  203 (380)
T d1edga_         127 KVKGYFPSSQYMASSKKYITSVWAQIAARFANYDEHL-IFEGMNEPRLVGHANEWWP--ELTNSDVVDSINCINQLNQDF  203 (380)
T ss_dssp             TTTSBCSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTE-EEECCSSCCCTTSTTTTSC--CTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCcccCcHHHHHHHHHHHHHHHHhhcCCCceE-EEeecccccccCCcccccc--ccccccHHHHHHHHHHHHHHH
Confidence                 111 22222    22222222 2333  5555 6788878743321110000  01111      1234566677


Q ss_pred             HHHHHHCCCc
Q 012112          285 SSMLSSAGYR  294 (471)
Q Consensus       285 ~~~L~~~Gy~  294 (471)
                      .+..++.|..
T Consensus       204 ~~~IR~~~~~  213 (380)
T d1edga_         204 VNTVRATGGK  213 (380)
T ss_dssp             HHHHHHTCGG
T ss_pred             HHHHHHhccC
Confidence            7777777743


No 49 
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]}
Probab=69.15  E-value=6.7  Score=35.08  Aligned_cols=120  Identities=15%  Similarity=0.047  Sum_probs=72.5

Q ss_pred             CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC----C------CC---CC
Q 012112          162 DARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS----L------PH---QT  228 (471)
Q Consensus       162 ~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G----l------Pg---qT  228 (471)
                      ..+.++.||++|+|-|-++| =.++.     .-..+.+++.+.++.++++|+. |-+|+-+-    -      |.   .+
T Consensus        29 ~~~~~~~lk~~G~n~VRi~v-W~~p~-----~g~~~~~~~~~~v~~a~~~gl~-vil~~h~~~~wa~~~~~~~p~~~~~~  101 (332)
T d1hjsa_          29 AQPLENILAANGVNTVRQRV-WVNPA-----DGNYNLDYNIAIAKRAKAAGLG-VYIDFHYSDTWADPAHQTMPAGWPSD  101 (332)
T ss_dssp             BCCHHHHHHHTTCCEEEEEE-CSSCT-----TCTTSHHHHHHHHHHHHHTTCE-EEEEECCSSSCCBTTBCBCCTTCCCS
T ss_pred             cccHHHHHHHcCCCEEEeee-eecCC-----CCccCHHHHHHHHHHHHHCCCE-EEEEecCCccccCccccCCCcccccc
Confidence            46789999999999999886 32221     2345799999999999999997 88887541    1      11   13


Q ss_pred             HHHHHHHHHHH--------HhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q 012112          229 PQMWEESLRRT--------VGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGY  293 (471)
Q Consensus       229 ~e~~~~~l~~~--------~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy  293 (471)
                      .+.+.+.+...        ... -.++.+..+--++...+.  ...+  ..++.+...++...+.+...+.+-
T Consensus       102 ~~~~~~~~~~~~~~v~~~~k~~-~~~~~~~~i~nE~n~g~~--w~~~--~~~~~~~~~~l~~~a~~av~~~~~  169 (332)
T d1hjsa_         102 IDNLSWKLYNYTLDAANKLQNA-GIQPTIVSIGNEIRAGLL--WPTG--RTENWANIARLLHSAAWGIKDSSL  169 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TCCCSEEEESSSGGGEET--BTTE--ETTCHHHHHHHHHHHHHHHHTSCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc-CCchhHhhhccccCCccc--CccC--CcchHHHHHHHHHHHHHHHHhhcc
Confidence            44444433322        222 233444444434432211  0111  124556778888888888887653


No 50 
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=68.99  E-value=1.6  Score=36.45  Aligned_cols=53  Identities=15%  Similarity=0.387  Sum_probs=39.9

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEcc
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGV  181 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGv  181 (471)
                      ++.|.+--     ++++++.+.++.+..        .+.+|+. +.++.+.++.+++.|++.||+|-
T Consensus       100 ~diImLDN-----~~pe~~~~av~~i~~--------~~~lEaS-GgI~~~ni~~ya~~GVD~IS~ga  152 (167)
T d1qapa1         100 ADIIMLDN-----FNTDQMREAVKRVNG--------QARLEVS-GNVTAETLREFAETGVDFISVGA  152 (167)
T ss_dssp             CSEEEESS-----CCHHHHHHHHHTTCT--------TCCEEEC-CCSCHHHHHHHHHTTCSEEECSH
T ss_pred             CcEEEecC-----CCHHHHHHHHHhcCC--------ceEEEEe-CCCCHHHHHHHHHcCCCEEECCc
Confidence            56676643     467788776654421        3567775 68999999999999999999984


No 51 
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]}
Probab=68.34  E-value=4.3  Score=35.88  Aligned_cols=106  Identities=14%  Similarity=0.139  Sum_probs=61.8

Q ss_pred             EEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCC--C--CH-------HHHHHHHHCCCCEEEEccCCCC
Q 012112          117 TVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGT--F--DA-------RKMEELMDLGVNRVSLGVQAFQ  185 (471)
Q Consensus       117 ~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~--l--~~-------e~l~~l~~~GvnrvsiGvQS~~  185 (471)
                      .+..||=|||.   ..    ++.+++...    .++.+-++|..  +  ++       +.++.++++|++-|-+|+-+-|
T Consensus        29 ~l~~GGlTPS~---g~----i~~~~~~~~----iPv~vMIRPR~GdF~Ys~~E~~~M~~di~~~k~~G~dGvV~G~L~~d   97 (247)
T d1twda_          29 APKEGGLTPSL---GV----LKSVRQRVT----IPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVD   97 (247)
T ss_dssp             CGGGTCBCCCH---HH----HHHHHHHCC----SCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT
T ss_pred             CcccCCCCCCH---HH----HHHHHHhcC----CCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCC
Confidence            34457778975   33    444444433    46888888764  2  43       5667788899999999997643


Q ss_pred             HHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEE
Q 012112          186 DELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVS  248 (471)
Q Consensus       186 d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his  248 (471)
                      -        ..+.+...+.++.++  |.+ +.+.--|.   .+ .++.+.++.+.++++++|=
T Consensus        98 g--------~iD~~~~~~L~~~a~--~l~-vTFHRAfD---~~-~d~~~al~~Li~lG~~rIL  145 (247)
T d1twda_          98 G--------NVDMPRMEKIMAAAG--PLA-VTFHRAFD---MC-ANPLYTLNNLAELGIARVL  145 (247)
T ss_dssp             S--------SBCHHHHHHHHHHHT--TSE-EEECGGGG---GC-SCHHHHHHHHHHHTCCEEE
T ss_pred             C--------CccHHHHHHHHHHhc--ccC-eeeehhhh---hh-CCHHHHHHHHHhcCCCeEe
Confidence            2        234444555555443  222 22222221   11 2566777777777777663


No 52 
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=66.69  E-value=3.8  Score=36.17  Aligned_cols=89  Identities=15%  Similarity=0.081  Sum_probs=55.1

Q ss_pred             EEEEecCCCC----CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC
Q 012112          152 ISMEMDPGTF----DARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ  227 (471)
Q Consensus       152 itiE~~P~~l----~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq  227 (471)
                      +.+.+.|+.-    +.+.++.++++|++||...+++..++.-.      -.+.+.+.++.+++.|++ |-+|+=-....+
T Consensus         5 LGiSvY~~~~~~e~~~~yi~~a~~~Gf~~iFTSL~~~e~~~~~------~~~~~~~l~~~a~~~g~~-vi~DIsp~~l~~   77 (244)
T d1x7fa2           5 LGISLYPEHSTKEKDMAYISAAARHGFSRIFTCLLSVNRPKEE------IVAEFKEIINHAKDNNME-VILDVAPAVFDQ   77 (244)
T ss_dssp             EEEEECGGGSCHHHHHHHHHHHHTTTEEEEEEEECCC--------------HHHHHHHHHHHHTTCE-EEEEECTTCC--
T ss_pred             eEEEEccCCCCHHHHHHHHHHHHHCCCCEEEecCccCCCCHHH------HHHHHHHHHHHHHHCCCE-EEEEcCHHHHHH
Confidence            4444556533    45779999999999999999987654322      245678889999999997 888875443332


Q ss_pred             CHHHHHHHHHHHHhCCCCcEE
Q 012112          228 TPQMWEESLRRTVGAQPKHVS  248 (471)
Q Consensus       228 T~e~~~~~l~~~~~l~p~his  248 (471)
                      ---+ ..++..+.+++++.|.
T Consensus        78 lg~s-~~dl~~~~~lGi~glR   97 (244)
T d1x7fa2          78 LGIS-YSDLSFFAELGADGIR   97 (244)
T ss_dssp             -----CCCTHHHHHHTCSEEE
T ss_pred             hCCC-HHHHHHHHHCCCCEEE
Confidence            1111 1246677777776553


No 53 
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.34  E-value=18  Score=31.96  Aligned_cols=89  Identities=20%  Similarity=0.145  Sum_probs=61.7

Q ss_pred             cEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHc--CCCeeEeeeecCCCCC
Q 012112          150 AEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLC--GVENWSLDLISSLPHQ  227 (471)
Q Consensus       150 ~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~--G~~~v~~DlI~GlPgq  227 (471)
                      ..|-+-.-|.+-+++.|+.|.++|+|-+-|.+=.++.+.         .++..+.++.+.+.  |-. |.+.+-...|.-
T Consensus        21 TKIIaTiGPas~~~e~l~~li~aG~dv~RlN~SHg~~~~---------h~~~i~~iR~~~e~~~G~~-v~i~~dl~~p~l   90 (265)
T d1a3xa2          21 TSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEY---------HKSVIDNARKSEELYPGRP-LAIALDTKGPAL   90 (265)
T ss_dssp             SEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSCCHHH---------HHHHHHHHHHHHHHCCCSC-CBCEEECCCCSS
T ss_pred             ceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHH---------HHHHHHHHHHHhhhccCCc-eeeeccccchhc
Confidence            466666789999999999999999997666665555332         12233344444332  444 666666677888


Q ss_pred             CHHHHHHHHHHHHhCCCCcEEE
Q 012112          228 TPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       228 T~e~~~~~l~~~~~l~p~his~  249 (471)
                      |..|.. +++++.+.++|.|.+
T Consensus        91 tekD~~-di~~a~~~~vD~ial  111 (265)
T d1a3xa2          91 SEKDKE-DLRFGVKNGVHMVFA  111 (265)
T ss_dssp             CHHHHH-HHHHHHHTTCCEECC
T ss_pred             ccchHH-HHHHhhhcccceEee
Confidence            988864 789999999987653


No 54 
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=66.21  E-value=0.97  Score=37.99  Aligned_cols=59  Identities=15%  Similarity=0.182  Sum_probs=45.0

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCC
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAF  184 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~  184 (471)
                      ++.|.+-.     ++|+++.++.+.++...+     .+.+|+. +.++.+.++.+.+.|++.||+|-=+.
T Consensus        99 ~d~i~LDn-----~~pe~~k~~~~~lk~~~~-----~i~lEaS-GGI~~~ni~~~a~~GVD~Is~g~lt~  157 (170)
T d1o4ua1          99 ADIVMLDN-----LSPEEVKDISRRIKDINP-----NVIVEVS-GGITEENVSLYDFETVDVISSSRLTL  157 (170)
T ss_dssp             CSEEEEES-----CCHHHHHHHHHHHHHHCT-----TSEEEEE-ECCCTTTGGGGCCTTCCEEEEGGGTS
T ss_pred             ccEEEEcC-----cChhhHhHHHHHHHhhCC-----cEEEEEE-CCCCHHHHHHHHHcCCCEEEcCcccc
Confidence            56677753     477899999998887642     3566665 35788888999999999999996544


No 55 
>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}
Probab=65.70  E-value=5.6  Score=36.00  Aligned_cols=62  Identities=11%  Similarity=0.136  Sum_probs=43.1

Q ss_pred             HHHHHHHHHCCCCEEEEcc--CCCCH---------------HHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          163 ARKMEELMDLGVNRVSLGV--QAFQD---------------ELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGv--QS~~d---------------~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      .++|..|+++||+.|-|..  |+.+.               .-.+ +... -|.++.++.|+.|++.|+. |-+|++++.
T Consensus        40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~-vd~~~Gt~~df~~LV~~aH~~GI~-VIlD~V~NH  117 (357)
T d1gcya2          40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFN-KNGRYGSDAQLRQAASALGGAGVK-VLYDVVPNH  117 (357)
T ss_dssp             HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSC-SCSSSCCHHHHHHHHHHHHHTTCE-EEEEECCSB
T ss_pred             HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcc-cCccCCCHHHHHHHHHHHHhcCCe-EEEEEeccc
Confidence            3667778888888876652  22111               0012 3333 4889999999999999998 999999986


Q ss_pred             CC
Q 012112          225 PH  226 (471)
Q Consensus       225 Pg  226 (471)
                      -+
T Consensus       118 ~~  119 (357)
T d1gcya2         118 MN  119 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            44


No 56 
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.00  E-value=0.82  Score=25.48  Aligned_cols=11  Identities=27%  Similarity=0.930  Sum_probs=9.2

Q ss_pred             CcCCcCCCCCc
Q 012112           64 RKRCHYCDFPI   74 (471)
Q Consensus        64 ~~~C~yC~f~~   74 (471)
                      |++|.+|++..
T Consensus         3 p~kck~cdyaa   13 (28)
T d2dmda1           3 PYKCKTCDYAA   13 (28)
T ss_dssp             SEECSSSCCEE
T ss_pred             Ccccccccchh
Confidence            68999999864


No 57 
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=64.74  E-value=3  Score=38.57  Aligned_cols=118  Identities=17%  Similarity=0.125  Sum_probs=73.1

Q ss_pred             CCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC----------CC----C
Q 012112          161 FDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS----------LP----H  226 (471)
Q Consensus       161 l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G----------lP----g  226 (471)
                      ...+.++.|+++|+|-|-|.| =-++.     .-..+.+++.+.++.++++|+. |-+||-+.          .|    +
T Consensus        28 ~~~d~~~~lk~~G~n~VRlrv-W~~p~-----~g~~~~~~~~~~~~~a~~~Gm~-vll~~hysd~Wadp~~q~~P~aw~~  100 (334)
T d1foba_          28 QTQALETILADAGINSIRQRV-WVNPS-----DGSYDLDYNLELAKRVKAAGMS-LYLDLHLSDTWADPSDQTTPSGWST  100 (334)
T ss_dssp             CBCCHHHHHHHHTCCEEEEEE-CSCCT-----TCTTCHHHHHHHHHHHHHTTCE-EEEEECCSSSCCBTTBCBCCTTSCS
T ss_pred             CcccHHHHHHHcCCCEEEeee-eeCCC-----CCcCcHHHHHHHHHHHHHCCCE-EEEEecCCCcccCCCcCCCcccccc
Confidence            345789999999999888886 11221     2346899999999999999997 88888763          22    1


Q ss_pred             CCHHHHH--------HHHHHHHhC--CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q 012112          227 QTPQMWE--------ESLRRTVGA--QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAG  292 (471)
Q Consensus       227 qT~e~~~--------~~l~~~~~l--~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~G  292 (471)
                      .+.+.+.        +.++.+.+.  .|+.+++-.   |+...+.  ...|.  .++.+...++...+.+..++.+
T Consensus       101 ~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgN---E~n~g~~--w~~g~--~~~~~~~a~ll~a~~~aVr~~~  169 (334)
T d1foba_         101 TDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGN---EIRAGLL--WPLGE--TSSYSNIGALLHSGAWGVKDSN  169 (334)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESS---SGGGCSS--BTTTS--TTCHHHHHHHHHHHHHHHHTSC
T ss_pred             cccccHHHHHHHHHHHHHHHHHhcCCCceEEEccc---ccCcccc--CCCCC--CCCHHHHHHHHHHHHHHHHHhh
Confidence            2333332        333333333  255565554   3221111  11111  2455677888888888888764


No 58 
>d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]}
Probab=63.34  E-value=3.4  Score=37.61  Aligned_cols=75  Identities=16%  Similarity=0.110  Sum_probs=51.5

Q ss_pred             EEEEecCCCCC--------------HHH-HHHHHHCCCCEEEEcc-CCC-CH-------HHHHHcCCC-CCHHHHHHHHH
Q 012112          152 ISMEMDPGTFD--------------ARK-MEELMDLGVNRVSLGV-QAF-QD-------ELLKSCGRA-HGLKEVYEAIE  206 (471)
Q Consensus       152 itiE~~P~~l~--------------~e~-l~~l~~~GvnrvsiGv-QS~-~d-------~~L~~l~R~-~t~~~~~~ai~  206 (471)
                      +--|+.|.+++              .++ |.-|+++|||.|-|-. ... ..       .-...+... .|.+++.+.|+
T Consensus        18 ~iYe~~~~~f~~~~~~~~~g~~~gi~~klidyl~~LGv~~iwl~Pi~~~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~   97 (396)
T d1m7xa3          18 SIYEVHLGSWRRHTDNNFWLSYRELADQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFID   97 (396)
T ss_dssp             EEEEECTTSSCBCTTTCCBCCHHHHHHHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHH
T ss_pred             EEEEEccCccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCcCcCcCCCcCcccCCHHHHHHHHH
Confidence            34467777764              355 4899999999987753 111 11       111123333 37899999999


Q ss_pred             HHHHcCCCeeEeeeecCCCCC
Q 012112          207 IVKLCGVENWSLDLISSLPHQ  227 (471)
Q Consensus       207 ~~~~~G~~~v~~DlI~GlPgq  227 (471)
                      .|++.|++ |-+|++++.-+.
T Consensus        98 ~aH~~gi~-VilD~V~NH~~~  117 (396)
T d1m7xa3          98 AAHAAGLN-VILDWVPGHFPT  117 (396)
T ss_dssp             HHHHTTCE-EEEEECTTSCCC
T ss_pred             HHhhhhhh-hhhcccccccCC
Confidence            99999998 999999986553


No 59 
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=62.55  E-value=27  Score=30.51  Aligned_cols=78  Identities=10%  Similarity=0.057  Sum_probs=43.8

Q ss_pred             HHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCC
Q 012112          164 RKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQ  243 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~  243 (471)
                      +.++.+.+.|++-|-++--+..-.       ..|.++..+.++.+.++.-.  .+-+|.|..+.+.++..+..+.+.+++
T Consensus        28 ~~i~~l~~~Gv~gl~~~G~tGE~~-------~Ls~~Er~~l~~~~~~~~~~--~~~vi~gv~~~s~~~~i~~a~~a~~~G   98 (292)
T d1xkya1          28 KLVNYLIDNGTTAIVVGGTTGESP-------TLTSEEKVALYRHVVSVVDK--RVPVIAGTGSNNTHASIDLTKKATEVG   98 (292)
T ss_dssp             HHHHHHHHTTCCEEEESSTTTTGG-------GSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHCCCCEEEECeEccchh-------hCCHHHHHHHHHHHHHHhCC--CceEEEecCcccHHHHHHHHHHHHHcC
Confidence            445555566777766655443221       12455555555555544111  245666666666666666666777777


Q ss_pred             CCcEEEE
Q 012112          244 PKHVSVY  250 (471)
Q Consensus       244 p~his~y  250 (471)
                      .+.+.+.
T Consensus        99 ad~ilv~  105 (292)
T d1xkya1          99 VDAVMLV  105 (292)
T ss_dssp             CSEEEEE
T ss_pred             CCEEEEC
Confidence            7666554


No 60 
>d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]}
Probab=62.20  E-value=47  Score=28.79  Aligned_cols=115  Identities=14%  Similarity=0.101  Sum_probs=70.0

Q ss_pred             CCCHHHHHHHH-HCCCC--EEEEccCCC----CHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeec---CCCCCCH
Q 012112          160 TFDARKMEELM-DLGVN--RVSLGVQAF----QDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLIS---SLPHQTP  229 (471)
Q Consensus       160 ~l~~e~l~~l~-~~Gvn--rvsiGvQS~----~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~---GlPgqT~  229 (471)
                      ..+++.++.++ +.|+|  |+.++.+..    ++..         .+.+.++|+.+.+.|+- |-+|+--   ..|....
T Consensus        40 ~~~~~~~~~l~~~~G~N~VR~~~~~~~~~~~~~~~~---------~~~ld~~v~~a~~~Gl~-Vild~h~~~~~~~~~~~  109 (300)
T d7a3ha_          40 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPSV---------KEKVKEAVEAAIDLDIY-VIIDWHILSDNDPNIYK  109 (300)
T ss_dssp             GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTTH---------HHHHHHHHHHHHHHTCE-EEEEEECSSSCSTTTTH
T ss_pred             cCCHHHHHHHHHHcCCCEEEEeeEcCccCcccCHHH---------HHHHHHHHHHHHHCCCE-EEEeeeecCCCCChhhH
Confidence            45677777775 57988  667776653    3333         34567889999999996 7777632   2233445


Q ss_pred             HHHHHHHHHHHh-C-CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCce
Q 012112          230 QMWEESLRRTVG-A-QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRH  295 (471)
Q Consensus       230 e~~~~~l~~~~~-l-~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~  295 (471)
                      +.+.+..+.+.+ . +-++| +|.+.-||...-.          ...+.....++.+.+.+.+.+-.+
T Consensus       110 ~~~~~~w~~ia~ryk~~p~V-~~el~NEP~~~~~----------~~~~~~~~~~~~~~~~IR~~dp~~  166 (300)
T d7a3ha_         110 EEAKDFFDEMSELYGDYPNV-IYEIANEPNGSDV----------TWGNQIKPYAEEVIPIIRNNDPNN  166 (300)
T ss_dssp             HHHHHHHHHHHHHHTTCTTE-EEECCSCCCSTTC----------CTTTTHHHHHHHHHHHHHTTCSSS
T ss_pred             HHHHHHHHHHHHHhCCCCcc-eeeeecccCCCCC----------CchhHHHHHHHHHHHHHHhcCCCC
Confidence            555555554443 2 23456 4888877742211          111234567777888888777654


No 61 
>d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]}
Probab=62.16  E-value=17  Score=32.50  Aligned_cols=126  Identities=12%  Similarity=0.064  Sum_probs=73.9

Q ss_pred             CHHHHHHHHHCCCCEE--EEccCCCCHHHHH----------HcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCC----
Q 012112          162 DARKMEELMDLGVNRV--SLGVQAFQDELLK----------SCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLP----  225 (471)
Q Consensus       162 ~~e~l~~l~~~Gvnrv--siGvQS~~d~~L~----------~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlP----  225 (471)
                      .++.++.|+++|+|-|  -++-+.+.+....          ........+.+.++++.++++|+. |-+|+--+-+    
T Consensus        46 ~~~~~~~i~~~G~N~VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~-Vildlh~~~~~~~~  124 (358)
T d1ecea_          46 YRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLR-IILDRHRPDCSGQS  124 (358)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCE-EEEEEEESBTTBCC
T ss_pred             HHHHHHHHHHcCCCEEEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHHHCCCc-eeeecccccccCCC
Confidence            4788999999999955  4555544332111          111122367788999999999997 8888853211    


Q ss_pred             ------CCCHHHHHHHHHHHHhC-C-CCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCc
Q 012112          226 ------HQTPQMWEESLRRTVGA-Q-PKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYR  294 (471)
Q Consensus       226 ------gqT~e~~~~~l~~~~~l-~-p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~  294 (471)
                            ....+.+.+.++.+.+. + -+.|-.|.+.-||.-+....   +.   .......+++..+.+.+++..=.
T Consensus       125 ~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~---~~---~~~~~~~~~~~~~~~~Ir~~d~~  195 (358)
T d1ecea_         125 ALWYTSSVSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWG---CG---DPSIDWRLAAERAGNAVLSVNPN  195 (358)
T ss_dssp             SSSCCSSSCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSS---CC---CTTTBHHHHHHHHHHHHHHHCTT
T ss_pred             ccccCChHHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCC---cc---chhhhHHHHHHHHHHHHHhhCCC
Confidence                  13467777777766542 2 23466777777774321110   10   11122345667777777765433


No 62 
>d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]}
Probab=61.99  E-value=1.9  Score=40.00  Aligned_cols=70  Identities=20%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCC-----HHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHH
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQ-----DELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~-----d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~  234 (471)
                      ++|..|+++||+.|-|..  ++.+     ..-...+... -+.+++.+.++.+++.|++ |-+|+++..=+....-+..
T Consensus        27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~-VilD~V~NH~~~~~~~~~~  104 (391)
T d1lwha2          27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIK-VVLDLPIHHTGFLHTWFQK  104 (391)
T ss_dssp             HTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCE-EEEEECTTBCCTTSHHHHH
T ss_pred             HhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCE-Eeecccccccccccccccc
Confidence            788999999999997742  1111     1111223333 3789999999999999998 9999999886665554443


No 63 
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=61.92  E-value=2.6  Score=38.24  Aligned_cols=30  Identities=13%  Similarity=0.020  Sum_probs=26.5

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      -+.+++++.|+.+++.|++ |-+|++++.-+
T Consensus        78 Gt~~efk~lV~~~H~~GI~-VilDvV~NHt~  107 (390)
T d1ud2a2          78 GTKAQLERAIGSLKSNDIN-VYGDVVMNHKM  107 (390)
T ss_dssp             CCHHHHHHHHHHHHHTTCE-EEEEECCSEEC
T ss_pred             CCHHHHHHHHHHHHhcCCc-eEEEEcccccc
Confidence            3789999999999999998 99999997633


No 64 
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=61.69  E-value=17  Score=24.61  Aligned_cols=38  Identities=8%  Similarity=-0.042  Sum_probs=30.6

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecC
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDE  420 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~  420 (471)
                      ...+...++++.+|.+... ....+++|.++||+.....
T Consensus        21 ~~~v~~~~iA~~L~vs~~S-Vt~mvkrL~~~Glv~~~~y   58 (63)
T d2isya1          21 GVTPLRARIAERLDQSGPT-VSQTVSRMERDGLLRVAGD   58 (63)
T ss_dssp             TCCCCHHHHHHHHTCCHHH-HHHHHHHHHHTTSEEECTT
T ss_pred             CCCCcHHHHHHHhCCCchh-HHHHHHHHHHCCCEEEcCC
Confidence            3458888899999998753 5678999999999987653


No 65 
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=61.37  E-value=3.1  Score=36.73  Aligned_cols=86  Identities=13%  Similarity=0.201  Sum_probs=61.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCC----HHHHHHcCCCCCHHHHHHH
Q 012112          129 PPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQ----DELLKSCGRAHGLKEVYEA  204 (471)
Q Consensus       129 ~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~----d~~L~~l~R~~t~~~~~~a  204 (471)
                      ..+.|..+++.+++     .+.++|+-++|   +.+.++..++.|+++|.|=--.|.    +...+     ...+.+.++
T Consensus       111 ~~~~L~~~i~~l~~-----~girvSLFiDp---d~~~i~~a~~lGad~IElhTG~Ya~a~~~~~~~-----~el~~i~~a  177 (242)
T d1m5wa_         111 QRDKMRDACKRLAD-----AGIQVSLFIDA---DEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQA-----QELARIAKA  177 (242)
T ss_dssp             GHHHHHHHHHHHHH-----TTCEEEEEECS---CHHHHHHHHHTTCSEEEEECHHHHHCCSHHHHH-----HHHHHHHHH
T ss_pred             hHHHHHHHHHHHHh-----cCCeEEEEecc---chhhHHHHhhcCcceeeeecccccccccchhhH-----HHHHHHHHH
Confidence            34678888888875     35789999999   699999999999999988655442    22111     124567788


Q ss_pred             HHHHHHcCCCeeEeeeecCCCCCCHH
Q 012112          205 IEIVKLCGVENWSLDLISSLPHQTPQ  230 (471)
Q Consensus       205 i~~~~~~G~~~v~~DlI~GlPgqT~e  230 (471)
                      .+.+++.|+. |+.  ==||--++..
T Consensus       178 a~~A~~lGL~-VnA--GHgLn~~Nl~  200 (242)
T d1m5wa_         178 ATFAASLGLK-VNA--GHGLTYHNVK  200 (242)
T ss_dssp             HHHHHHTTCE-EEE--ESSCCTTTHH
T ss_pred             HHHHHhcCCc-ccC--CCCcCccchH
Confidence            9999999987 655  3455445443


No 66 
>d1m3ua_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Escherichia coli [TaxId: 562]}
Probab=61.30  E-value=27  Score=30.68  Aligned_cols=146  Identities=16%  Similarity=0.189  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHH
Q 012112          198 LKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQS  277 (471)
Q Consensus       198 ~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~  277 (471)
                      .+++.+....+.+.|-+.|.+      .|-  ....+.++.+.+.+++-++--.|+|..-+.+......|    -+.++.
T Consensus        91 ~~~a~~~a~~l~~~GAdaVKl------Egg--~~~~~~I~~L~~~gIPV~gHiGL~PQ~~~~~GG~r~qG----kt~~ea  158 (262)
T d1m3ua_          91 PEQAFENAATVMRAGANMVKI------EGG--EWLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQG----RGDEAG  158 (262)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEC------CCS--GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCC----CSHHHH
T ss_pred             hHHHHHHHHHHHhcCCcEEEe------ccc--hhHHHHHHHHHHcCCeEEeehhhchhhhhhcCCccccC----ccHHHH
Confidence            444444444555566553332      221  23345667777777765555556554433333322233    356777


Q ss_pred             HHHHHHHHHHHHHCCCceeccccccCCCcchhhhhhhhcCCCEEEEccCccc--c----------cCC------eEEEcC
Q 012112          278 ANFYRMASSMLSSAGYRHYEISSYGEDGYECKHNLTYWKNKPFYGFGLGSAS--Y----------LGG------LRFSRP  339 (471)
Q Consensus       278 ~~~~~~~~~~L~~~Gy~~yeis~fa~~g~~~~hn~~yw~~~~ylG~G~gA~s--~----------~~~------~r~~n~  339 (471)
                      .++++.+. .|+++|=--.++-.-  |. +-.-.+.=-..-|-+|+|+|...  .          ..+      .+|.|.
T Consensus       159 ~~l~~~a~-~le~AGaf~ivlE~v--p~-~va~~It~~~~IPtIGIGAG~~cDGQvlv~~DilG~~~~~~Pkf~k~y~~~  234 (262)
T d1m3ua_         159 DQLLSDAL-ALEAAGAQLLVLECV--PV-ELAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAE  234 (262)
T ss_dssp             HHHHHHHH-HHHHHTCCEEEEESC--CH-HHHHHHHHHCSSCEEEESSCTTSSEEEECHHHHTTCSCSSCCTTCCCSSTT
T ss_pred             HHHHHHHH-HHHhhcceEEEEecc--cH-HHHHHHHhhhcceeEeecccCCCcceEEehhHhhCCCCCCCCchHHHHhhh
Confidence            77777655 578888654433221  11 10011111134589999999873  1          111      134444


Q ss_pred             CC--hHHHHHHHHHHhcCCCcc
Q 012112          340 RR--MKEFVDYVQNLEAGLVDC  359 (471)
Q Consensus       340 ~~--~~~y~~~~~~~~~g~~~~  359 (471)
                      ..  .+.+.+|.+.+++|..|-
T Consensus       235 ~~~~~~a~~~y~~dV~~~~FP~  256 (262)
T d1m3ua_         235 TGDIRAAVRQYMAEVESGVYPG  256 (262)
T ss_dssp             TSSHHHHHHHHHHHHHHTCSSC
T ss_pred             HHHHHHHHHHHHHHHhcCCCCC
Confidence            32  255777888888888874


No 67 
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=60.28  E-value=8.8  Score=32.93  Aligned_cols=147  Identities=12%  Similarity=0.162  Sum_probs=74.9

Q ss_pred             HHHHHHHHCCCCEEEEcc--------CCCCHHHHHHcCCCCC--------HHHHHHHHHHHHHcCCCeeEeeeecCCCCC
Q 012112          164 RKMEELMDLGVNRVSLGV--------QAFQDELLKSCGRAHG--------LKEVYEAIEIVKLCGVENWSLDLISSLPHQ  227 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--------QS~~d~~L~~l~R~~t--------~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq  227 (471)
                      +.++.+.++|++.+++-+        -|+..+.++.+.+..+        ..+-.+-++.+.++|.+.|.+.      -|
T Consensus        18 ~~i~~~~~~g~d~iHiDimDg~Fvpn~s~g~~~i~~i~~~t~~~~dvHLMv~~P~~~i~~~~~~ga~~i~~H------~E   91 (217)
T d2flia1          18 SELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTIH------TE   91 (217)
T ss_dssp             HHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEEE------GG
T ss_pred             HHHHHHHHcCCCEEEEEcccCcCCCccccCHHHHHHHHhcCCCceEeEEEecCHHHHHHHHHHcCCcEEEec------cc
Confidence            566777777777777764        5667777666654322        1222334555566666544333      23


Q ss_pred             CHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcc--------------cCCCCCCCCHHHHHHHHHHHHHHHHHCCC
Q 012112          228 TPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILY--------------TPGEFPLPTETQSANFYRMASSMLSSAGY  293 (471)
Q Consensus       228 T~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~--------------~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy  293 (471)
                      +.++..+.++.+.+.+..    ..+.+.|+|++....              ..|.-..+-.....+.-..+.+++.+.|+
T Consensus        92 ~~~~~~~~i~~i~~~g~~----~Gial~p~T~~~~~~~~l~~id~vliM~V~pG~~Gq~f~~~~~~ki~~l~~~~~~~~~  167 (217)
T d2flia1          92 STRHIHGALQKIKAAGMK----AGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGL  167 (217)
T ss_dssp             GCSCHHHHHHHHHHTTSE----EEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTC
T ss_pred             cccCHHHHHHHHHhcCCe----EEEEecCCcchhHHHhHHhhcCEEEEEEEcCcccccccchhhHHHHHHHHHHHHhcCC
Confidence            334566667777766653    234445555543321              11111111112233344566777778777


Q ss_pred             ceeccccccCCCcchhhhhhhhc--CCCEEEEc
Q 012112          294 RHYEISSYGEDGYECKHNLTYWK--NKPFYGFG  324 (471)
Q Consensus       294 ~~yeis~fa~~g~~~~hn~~yw~--~~~ylG~G  324 (471)
                      . +.|   .-.|--...|.....  +.|.+=.|
T Consensus       168 ~-~~I---~vDGGIn~~~i~~l~~aGad~~V~G  196 (217)
T d2flia1         168 S-FDI---EVDGGVDNKTIRACYEAGANVFVAG  196 (217)
T ss_dssp             C-CEE---EEESSCCTTTHHHHHHHTCCEEEES
T ss_pred             C-eEE---EEeCCCCHHHHHHHHHCCCCEEEEc
Confidence            4 222   122333334444432  56777777


No 68 
>d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]}
Probab=60.06  E-value=33  Score=29.72  Aligned_cols=120  Identities=15%  Similarity=0.124  Sum_probs=71.6

Q ss_pred             HHHHHHHHHCCCCEEEE--ccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeec------CCCCCCHHHHHH
Q 012112          163 ARKMEELMDLGVNRVSL--GVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLIS------SLPHQTPQMWEE  234 (471)
Q Consensus       163 ~e~l~~l~~~Gvnrvsi--GvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~------GlPgqT~e~~~~  234 (471)
                      .+.++.|++.|+|-|-+  +.+..        .-....+.+.+.++.+.+.|+. |-+|+--      +-.....+.+.+
T Consensus        35 ~~~~~~i~~~G~N~VRl~~~~~~~--------~~~~~~~~~~~~v~~a~~~Gi~-vildlh~~~~~~~~~~~~~~~~~~~  105 (302)
T d1bqca_          35 TQAFADIKSHGANTVRVVLSNGVR--------WSKNGPSDVANVISLCKQNRLI-CMLEVHDTTGYGEQSGASTLDQAVD  105 (302)
T ss_dssp             TTHHHHHHHTTCSEEEEEECCSSS--------SCCCCHHHHHHHHHHHHHTTCE-EEEEEGGGTTTTTSTTCCCHHHHHH
T ss_pred             HHHHHHHHhcCCCEEEEecccccc--------cCcchHHHHHHHHHHHHHCCCE-EEEEecccccccCCCchHHHHHHHH
Confidence            35689999999996555  43322        1234567889999999999997 8888841      112235566665


Q ss_pred             HHHHHHh-C--CCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCce---ecccccc
Q 012112          235 SLRRTVG-A--QPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRH---YEISSYG  302 (471)
Q Consensus       235 ~l~~~~~-l--~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~---yeis~fa  302 (471)
                      ..+.+.+ +  .|. +-.|.+.=||.-...          ...+...+++..+.+.+++.+..+   ++..+|+
T Consensus       106 ~w~~ia~~~~~~p~-vv~~~l~NEp~~~~~----------~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~  168 (302)
T d1bqca_         106 YWIELKSVLQGEED-YVLINIGNEPYGNDS----------ATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWG  168 (302)
T ss_dssp             HHHHTHHHHTTCTT-TEEEECSSSCCCSCH----------HHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTT
T ss_pred             HHHHHHHHhcCCCC-EEEEeccccccCCCC----------cchhhhHHHHHHHHHHHHHcCCCcEEEEcCcccc
Confidence            5555443 2  344 344777766632110          011234556777778888877654   4444444


No 69 
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Probab=58.42  E-value=2.9  Score=38.58  Aligned_cols=74  Identities=14%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             HHHHHHHHCCCCEEEEc-cCCC------CHHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHH
Q 012112          164 RKMEELMDLGVNRVSLG-VQAF------QDELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEES  235 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiG-vQS~------~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~  235 (471)
                      ++|..|+++|||.|.|. |..+      +..-.-.+... -+.++..+.|+.+++.|+. |-+|++++.-+.+...+.+.
T Consensus        57 ~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~-vilD~V~NH~s~~~~~~~~~  135 (382)
T d1wzla3          57 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIK-IILDAVFNHAGDQFFAFRDV  135 (382)
T ss_dssp             HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCE-EEEEECCSBCCTTSHHHHHH
T ss_pred             HhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccc-eEeeeeecccccccccccch
Confidence            45556666666666652 2211      11111123333 3889999999999999998 99999999877776666655


Q ss_pred             HHH
Q 012112          236 LRR  238 (471)
Q Consensus       236 l~~  238 (471)
                      +..
T Consensus       136 ~~~  138 (382)
T d1wzla3         136 LQK  138 (382)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            443


No 70 
>d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=58.37  E-value=2.5  Score=39.09  Aligned_cols=70  Identities=13%  Similarity=0.115  Sum_probs=43.5

Q ss_pred             HHHHHHHHCCCCEEEEc-cCCC------CHHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHH
Q 012112          164 RKMEELMDLGVNRVSLG-VQAF------QDELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiG-vQS~------~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~  234 (471)
                      ++|..|+++|||.|.|. |+..      +..-+..+... -|.++..+.++.+++.|+. |-+|++++.=+..-.-+..
T Consensus        57 ~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~-VilD~V~NH~~~~~~~~~~  134 (382)
T d1j0ha3          57 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIR-VMLDAVFNHCGYEFAPFQD  134 (382)
T ss_dssp             HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCE-EEEEECCSBCCTTCHHHHH
T ss_pred             HhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCCCCHHHHHHHHHHhhhccce-EEEEeeecccccccccchh
Confidence            44556666666666542 2111      11111223322 4789999999999999997 9999999875554444443


No 71 
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.93  E-value=11  Score=26.27  Aligned_cols=53  Identities=11%  Similarity=0.210  Sum_probs=40.4

Q ss_pred             CCHhhHHHHHHHHhccccCCCCHhhHHHHh-CCChHHHHHHHHHHHHHCCCEEEe
Q 012112          365 IDAKDLAMDVLMLSFRTARGVDLKSFGETF-GCSLVHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       365 l~~~~~~~e~~~~~Lr~~~gi~~~~~~~~f-g~~~~~~~~~~~~~~~~~gll~~~  418 (471)
                      |++.++..-.++.+---.+|+...++.+++ |.+.. .+.+.++.|...|+|-.+
T Consensus         4 Ls~~q~~V~~~i~s~~~~eGi~~~el~~~l~~~~~~-~i~~aid~L~~eG~IYsT   57 (69)
T d1dpua_           4 LTVAQNQVLNLIKACPRPEGLNFQDLKNQLKHMSVS-SIKQAVDFLSNEGHIYST   57 (69)
T ss_dssp             SCHHHHHHHHHHHHCCCTTTEEHHHHHHHSTTSCHH-HHHHHHHHHHHTTSEEEC
T ss_pred             CCHHHHHHHHHHHhCCCccCcCHHHHHHHccCCCHH-HHHHHHHHHHhCCceecc
Confidence            455555555555565567899999999998 66654 588999999999999654


No 72 
>d1v93a_ c.1.23.1 (A:) Methylenetetrahydrofolate reductase {Thermus thermophilus [TaxId: 274]}
Probab=57.60  E-value=46  Score=29.25  Aligned_cols=88  Identities=18%  Similarity=0.126  Sum_probs=64.7

Q ss_pred             cEEEEEecCCCCC------HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          150 AEISMEMDPGTFD------ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       150 ~eitiE~~P~~l~------~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      .-+|+|+-|-.-.      .+.++.|++.+...||+-   +++       ++.+......+...+++.|++ +-..+-.-
T Consensus        13 ~~~S~Ei~PPk~~~~~~~l~~~~~~L~~~~p~fisVT---~~~-------~g~~~~~tl~~a~~l~~~G~~-~i~Hlt~r   81 (292)
T d1v93a_          13 PLFSFEFFPPKDPEGEEALFRTLEELKAFRPAFVSIT---YGA-------MGSTRERSVAWAQRIQSLGLN-PLAHLTVA   81 (292)
T ss_dssp             CEEEEEECCCSSHHHHHHHHHHHHHHHTTCCSEEEEC---CCG-------GGTTHHHHHHHHHHHHHTTCC-EEEEECCT
T ss_pred             CeEEEEEeCCCCchHHHHHHHHHHHHhcCCCCEEEec---CCC-------CCccchhHHHHHHHHHhCCCC-ceeeeeec
Confidence            4699999884321      246778888889999983   322       234567777788888999998 55555442


Q ss_pred             CCCCCHHHHHHHHHHHHhCCCCcEEEE
Q 012112          224 LPHQTPQMWEESLRRTVGAQPKHVSVY  250 (471)
Q Consensus       224 lPgqT~e~~~~~l~~~~~l~p~his~y  250 (471)
                        +.+...++..|..+.++|+++|-+-
T Consensus        82 --~~n~~~l~~~l~~~~~~GI~niLal  106 (292)
T d1v93a_          82 --GQSRKEVAEVLHRFVESGVENLLAL  106 (292)
T ss_dssp             --TSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             --CchHHHHHHHHHHHHHhCcCeEeec
Confidence              6899999999999999999977443


No 73 
>d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=57.36  E-value=1.8  Score=40.75  Aligned_cols=115  Identities=11%  Similarity=0.079  Sum_probs=65.0

Q ss_pred             HHHHHHHHCCCCEEEEc-cCCCCH------HH--HHHcCC-CCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHH
Q 012112          164 RKMEELMDLGVNRVSLG-VQAFQD------EL--LKSCGR-AHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWE  233 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiG-vQS~~d------~~--L~~l~R-~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~  233 (471)
                      ++|..|+++||+.|.|. |+.+..      .+  ...+.. --+.+++.+.|+.|++.|+. |-+|++++.-+.+-.-+.
T Consensus        38 ~~ldyl~~LGv~~i~L~Pv~~~~~~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~-VilD~V~NH~~~~~~~~~  116 (420)
T d2bhua3          38 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLG-VFLDVVYNHFGPSGNYLS  116 (420)
T ss_dssp             HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCE-EEEEECCSCCCSSSCCHH
T ss_pred             HhHHHHHHcCCCEEEeCCCCcCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhcccc-ccccccccccCCCCcccc
Confidence            55677777788887754 221111      01  112222 23789999999999999998 999999986443321111


Q ss_pred             HHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          234 ESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       234 ~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                             ...+..-.-   ....++.       -.+..-+.+....|...+..++++.|..=+
T Consensus       117 -------~~~~~~~~~---~~~~~~~-------~dlN~~np~v~~~~~~~~~~Wl~~~GVDGf  162 (420)
T d2bhua3         117 -------SYAPSYFTD---RFSSAWG-------MGLDYAEPHMRRYVTGNARMWLRDYHFDGL  162 (420)
T ss_dssp             -------HHCGGGEEE---EEECSSS-------EEECTTSHHHHHHHHHHHHHHHHHHCCSEE
T ss_pred             -------ccccccccc---ccccccc-------ccccccChHHHHHHHHHhheeeecccccEE
Confidence                   112211110   0011110       012344567788888888888888766533


No 74 
>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}
Probab=56.58  E-value=4.5  Score=36.21  Aligned_cols=63  Identities=17%  Similarity=0.162  Sum_probs=42.8

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCC-----HHHHHHcC--CCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQ-----DELLKSCG--RAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ  227 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~-----d~~L~~l~--R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq  227 (471)
                      ++|..|+++||+-|.|..  +|.+     ..-.-.+.  |--+.++..+.|+.+++.|+. |-+|++++.-+.
T Consensus        25 ~kLdyl~~lGv~~i~L~Pi~~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~-VilD~V~NH~~~   96 (347)
T d1ht6a2          25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQ-AIADIVINHRCA   96 (347)
T ss_dssp             TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCE-EEEEECCSBCCC
T ss_pred             HhHHHHHHcCCCEEEECCCCcCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceE-EeeeccccccCC
Confidence            566777777777776642  2221     11111222  346889999999999999998 999999976543


No 75 
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=56.57  E-value=14  Score=25.24  Aligned_cols=45  Identities=4%  Similarity=-0.013  Sum_probs=37.4

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEe
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~  418 (471)
                      ..|+.-|+...++...++++.+|.+.. .....+..|++.|++...
T Consensus         9 ~~Il~~l~~~g~~sr~eLa~~~glS~~-Tv~~~l~~L~~~Glv~e~   53 (71)
T d1z05a1           9 GRVYKLIDQKGPISRIDLSKESELAPA-SITKITRELIDAHLIHET   53 (71)
T ss_dssp             HHHHHHHHHHCSBCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHHHHcCCcCHHHHHHHHCCCHH-HHHHHHHHHHHCCCEEEe
Confidence            356666777889999999999999975 467789999999999753


No 76 
>d2hzta1 a.4.5.69 (A:4-98) Putative transcriptional regulator YtcD {Bacillus subtilis [TaxId: 1423]}
Probab=56.47  E-value=24  Score=25.74  Aligned_cols=62  Identities=10%  Similarity=0.085  Sum_probs=40.1

Q ss_pred             CCHhhHHHHh-CCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHHH
Q 012112          385 VDLKSFGETF-GCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELIS  463 (471)
Q Consensus       385 i~~~~~~~~f-g~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~~  463 (471)
                      ....++.+.- |++- ..+...|+.|++.|++........                 .-|+ ..+|| ++|..+.. |+.
T Consensus        25 ~rF~el~~~l~gis~-~~Ls~rLk~Le~~glv~r~~~~~~-----------------p~~v-eY~LT-~~G~~L~p-il~   83 (95)
T d2hzta1          25 KRTSELKRLMPNITQ-KMLTQQLRELEADGVINRIVYNQV-----------------PPKV-EYELS-EYGRSLEG-ILD   83 (95)
T ss_dssp             BCHHHHHHHCTTSCH-HHHHHHHHHHHHTTSEEEEEECSS-----------------SCEE-EEEEC-TTGGGGHH-HHH
T ss_pred             CCHHHHHHHhhcCCh-hHHHHHHHHHHHhHHHhheecccc-----------------ccch-hhhhh-hhHHHHHH-HHH
Confidence            5566777664 6663 356788999999999986532111                 1111 36997 99999984 444


Q ss_pred             HHHh
Q 012112          464 HAFG  467 (471)
Q Consensus       464 ~~~~  467 (471)
                      .+..
T Consensus        84 ~l~~   87 (95)
T d2hzta1          84 MLCA   87 (95)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443


No 77 
>d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]}
Probab=56.45  E-value=2.6  Score=39.50  Aligned_cols=28  Identities=7%  Similarity=0.113  Sum_probs=25.2

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      -+.+++.+.|+.+++.|++ |-+|++++.
T Consensus       105 Gt~~d~k~Lv~~~H~~Gi~-VilD~V~NH  132 (407)
T d1qhoa4         105 GNWTTFDTLVNDAHQNGIK-VIVDFVPNH  132 (407)
T ss_dssp             CCHHHHHHHHHHHHHTTCE-EEEEECTTE
T ss_pred             CCHHHHHHHHHHhhhcccc-eeecccccc
Confidence            4789999999999999998 999999864


No 78 
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=56.15  E-value=4.4  Score=37.54  Aligned_cols=63  Identities=17%  Similarity=0.185  Sum_probs=43.5

Q ss_pred             HHHHHHHHHCCCCEEEEccC--CCC--HH------HH--------HHcCC-CCCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          163 ARKMEELMDLGVNRVSLGVQ--AFQ--DE------LL--------KSCGR-AHGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQ--S~~--d~------~L--------~~l~R-~~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      .++|..|+++|||-|.|..=  +.+  +.      -.        ..+.. --|.+++.+.|+.|++.|++ |-+|+++.
T Consensus        27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIk-VIlDvV~N  105 (393)
T d1hvxa2          27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQ-VYADVVFD  105 (393)
T ss_dssp             HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE-EEEEECCS
T ss_pred             HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCE-EEEEEecc
Confidence            36788888888888877541  111  10      00        01222 23789999999999999998 99999987


Q ss_pred             CCC
Q 012112          224 LPH  226 (471)
Q Consensus       224 lPg  226 (471)
                      ..+
T Consensus       106 Ht~  108 (393)
T d1hvxa2         106 HKG  108 (393)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            654


No 79 
>d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}
Probab=55.90  E-value=2.9  Score=38.88  Aligned_cols=60  Identities=8%  Similarity=0.125  Sum_probs=39.6

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCC-------------CHHHHHHcCC-CCCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          164 RKMEELMDLGVNRVSLGV--QAF-------------QDELLKSCGR-AHGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~-------------~d~~L~~l~R-~~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      ++|..|+++||+-|.|..  +|.             +..-...+.. --+.+++.+.|+.+++.|++ |-+|+++..
T Consensus        47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~-VilD~V~NH  122 (381)
T d2guya2          47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMY-LMVDVVANH  122 (381)
T ss_dssp             HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCE-EEEEECCSB
T ss_pred             HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccc-eeeeccccc
Confidence            456666777777776542  110             1111122333 34889999999999999998 999999864


No 80 
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=55.81  E-value=61  Score=28.47  Aligned_cols=89  Identities=15%  Similarity=0.160  Sum_probs=63.1

Q ss_pred             CcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHc----CC-----CeeEee
Q 012112          149 DAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLC----GV-----ENWSLD  219 (471)
Q Consensus       149 ~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~----G~-----~~v~~D  219 (471)
                      ...|-+-.-|.+-+.+.|+.|.++|+|-+-|.+=.++.            ++..+.++.+|++    |.     ..+.+.
T Consensus        32 kTKIIaTiGPas~~~e~l~~Li~aGvnv~RiN~SHg~~------------e~h~~~i~~iR~~~~~~~~~~il~~~~~I~   99 (282)
T d2g50a2          32 NTGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTH------------EYHAETIKNVRTATESFASDPILYRPVAVA   99 (282)
T ss_dssp             CSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCH------------HHHHHHHHHHHHHHHTTTTCTTTCCCCEEE
T ss_pred             CCcEEEEeCCCCCCHHHHHHHHHcCCCEEEEeCCCCCH------------HHHHHHHHHHHHHHHHhCCCceeccccccc
Confidence            35677777899999999999999999977776655543            3444444444443    21     225566


Q ss_pred             eecCCCCCCHHHHHHHHHHHHhCCCCcEEEE
Q 012112          220 LISSLPHQTPQMWEESLRRTVGAQPKHVSVY  250 (471)
Q Consensus       220 lI~GlPgqT~e~~~~~l~~~~~l~p~his~y  250 (471)
                      .-...|.-|..++. ++.++.+.++|.|.+.
T Consensus       100 ~d~~~~~l~~~di~-di~~a~~~~vD~ialS  129 (282)
T d2g50a2         100 LDTKGPAVSEKDIQ-DLKFGVEQDVDMVFAS  129 (282)
T ss_dssp             EECCCCSSCHHHHH-HHHHHHHTTCSEEEET
T ss_pred             cccccccccchHHH-HHHHhhhccccceeec
Confidence            66677888888875 7899999999977653


No 81 
>d2obpa1 a.4.5.71 (A:12-92) Putative DNA-binding protein ReutB4095 {Ralstonia eutropha [TaxId: 106590]}
Probab=55.75  E-value=14  Score=26.07  Aligned_cols=55  Identities=15%  Similarity=0.108  Sum_probs=42.4

Q ss_pred             CCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEe-cCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHH
Q 012112          385 VDLKSFGETFGCSLVHTLCKAYKPYIESGHVICL-DEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELI  462 (471)
Q Consensus       385 i~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~  462 (471)
                      .++.++.++-+.+.. .+...+-+|...|+.... +++.                     .+.-+|| +.|..++.++|
T Consensus        25 WSLaklsKra~~PMS-~LRR~LTqL~~aGl~~t~~~edG---------------------~G~A~Lt-~~G~~lca~LF   80 (81)
T d2obpa1          25 WSLPKIAKRAQLPMS-VLRRVLTQLQAAGLADVSVEADG---------------------RGHASLT-QEGAALAAQLF   80 (81)
T ss_dssp             CBHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEECTTS---------------------CEEEEEC-HHHHHHHHHHC
T ss_pred             ccHHHHHhhcCCcHH-HHHHHHHHHhhcCceeeeeccCC---------------------cceeecc-HHHHHHHHHHC
Confidence            788999999998864 578899999999998754 2211                     1456997 99999887764


No 82 
>d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]}
Probab=55.44  E-value=4.5  Score=37.05  Aligned_cols=69  Identities=17%  Similarity=0.181  Sum_probs=43.7

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCCH-----HHHHHcC-CCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHH
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQD-----ELLKSCG-RAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWE  233 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~d-----~~L~~l~-R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~  233 (471)
                      ++|..|+++||+.|-|..  ++..+     .-+-.+. |--+.+++.+.|+.+++.|+. |-+|+++..-+.+-..+.
T Consensus        55 ~kLdylk~LGv~~i~l~Pi~~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~-VilD~V~NH~s~~~~~~~  131 (382)
T d1ea9c3          55 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIR-VLLDAVFNHSGRTFPPFV  131 (382)
T ss_dssp             HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCE-EEEECCCSBCCTTTHHHH
T ss_pred             HhhHHHHhCCCCEEEeCCCccCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcce-EEEeeecccccccCcchh
Confidence            445556666666655432  22111     1112232 334889999999999999998 999999987666544443


No 83 
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=54.00  E-value=19  Score=28.56  Aligned_cols=62  Identities=18%  Similarity=0.283  Sum_probs=43.3

Q ss_pred             CCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHHHH
Q 012112          385 VDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELISH  464 (471)
Q Consensus       385 i~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~~~  464 (471)
                      ....+|++..|++- ..+...|+.|++.|+|.....+                  ...|+ ..+|| ++|..+.. |+..
T Consensus        34 ~rf~el~~~lgis~-~vLs~rL~~L~~~gLv~r~~~~------------------~p~r~-~Y~LT-~~G~~L~p-il~~   91 (142)
T d2f2ea1          34 TRFGEFQKSLGLAK-NILAARLRNLVEHGVMVAVPAE------------------SGSHQ-EYRLT-DKGRALFP-LLVA   91 (142)
T ss_dssp             CSHHHHHHHHCCCH-HHHHHHHHHHHHTTSEEEEECS------------------SSSCE-EEEEC-HHHHTTHH-HHHH
T ss_pred             CCHHHHHHHhhccH-HHHHHHHHHHHHhcceeeecCC------------------CCCee-EEecC-cCcchHHH-HHHH
Confidence            55888888888775 4578899999999999753211                  12233 36897 99999965 4444


Q ss_pred             HHhc
Q 012112          465 AFGV  468 (471)
Q Consensus       465 ~~~~  468 (471)
                      +..|
T Consensus        92 l~~W   95 (142)
T d2f2ea1          92 IRQW   95 (142)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443


No 84 
>d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]}
Probab=53.86  E-value=2  Score=39.65  Aligned_cols=64  Identities=16%  Similarity=0.182  Sum_probs=46.7

Q ss_pred             HHHHHHHHHCCCCEEEEcc--CC----------------CCHHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          163 ARKMEELMDLGVNRVSLGV--QA----------------FQDELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGv--QS----------------~~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      .++|..|+++|||-|-|..  |+                .+..-...+.+. -+.++..+.|+.|++.|++ |-+|++++
T Consensus        20 ~~~ldyl~~lGv~aIwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~-VilD~V~N   98 (344)
T d1ua7a2          20 KHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIK-VIVDAVIN   98 (344)
T ss_dssp             HHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCE-EEEEECCS
T ss_pred             HHhHHHHHHcCCCEEEeCCCeeCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhccccee-Eeecccee
Confidence            3667788899999888742  11                222223455555 4899999999999999998 99999987


Q ss_pred             CCCC
Q 012112          224 LPHQ  227 (471)
Q Consensus       224 lPgq  227 (471)
                      .-+.
T Consensus        99 H~~~  102 (344)
T d1ua7a2          99 HTTF  102 (344)
T ss_dssp             BCCS
T ss_pred             eecC
Confidence            6543


No 85 
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.98  E-value=2.7  Score=23.73  Aligned_cols=12  Identities=33%  Similarity=1.063  Sum_probs=9.5

Q ss_pred             CcCCcCCCCCcc
Q 012112           64 RKRCHYCDFPIV   75 (471)
Q Consensus        64 ~~~C~yC~f~~~   75 (471)
                      |+.|.||.|.+.
T Consensus         2 py~cqyc~yrsa   13 (30)
T d1klra_           2 TYQCQYCEFRSA   13 (30)
T ss_dssp             CCCCSSSSCCCS
T ss_pred             Cccccccccccc
Confidence            578999998753


No 86 
>d1yx1a1 c.1.15.7 (A:3-252) Hypothetical protein PA2260 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=52.86  E-value=5.1  Score=34.80  Aligned_cols=25  Identities=24%  Similarity=0.198  Sum_probs=12.4

Q ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEE
Q 012112          226 HQTPQMWEESLRRTVGAQPKHVSVY  250 (471)
Q Consensus       226 gqT~e~~~~~l~~~~~l~p~his~y  250 (471)
                      ++..+++++.++.+.+++.++|.+.
T Consensus        76 ~~~~~~~~~~i~~A~~LG~~~v~~~  100 (250)
T d1yx1a1          76 GQLNPELEPTLRRAEACGAGWLKVS  100 (250)
T ss_dssp             SSBCTTHHHHHHHHHHTTCSEEEEE
T ss_pred             hhhHHHHHHHHHHHHHhCCCEEEEe
Confidence            3344445555555555555555443


No 87 
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=52.78  E-value=4.3  Score=37.64  Aligned_cols=63  Identities=13%  Similarity=0.105  Sum_probs=41.5

Q ss_pred             HHHHHHHHHCCCCEEEEcc-C-CCCHH--------HH--------HHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          163 ARKMEELMDLGVNRVSLGV-Q-AFQDE--------LL--------KSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGv-Q-S~~d~--------~L--------~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      .++|..|+++|||.|.|.. . |.+..        ..        ..+... -+.+++.+.|+.|++.|++ |-+|++++
T Consensus        24 ~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIk-VilDvV~N  102 (394)
T d2d3na2          24 NSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQ-VYGDVVMN  102 (394)
T ss_dssp             HHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCE-EEEEECCS
T ss_pred             HHHHHHHHHcCCCEEEECcCccCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCE-EEEEEecc
Confidence            3666777777777776543 1 11110        00        012222 3789999999999999998 99999987


Q ss_pred             CCC
Q 012112          224 LPH  226 (471)
Q Consensus       224 lPg  226 (471)
                      .-+
T Consensus       103 H~~  105 (394)
T d2d3na2         103 HKG  105 (394)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            643


No 88 
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.52  E-value=11  Score=26.33  Aligned_cols=38  Identities=11%  Similarity=0.215  Sum_probs=29.3

Q ss_pred             hccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEE
Q 012112          378 SFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVI  416 (471)
Q Consensus       378 ~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~  416 (471)
                      -+....=+.+++++.+||..-.+.+ +.++.|++.|.|.
T Consensus        15 ~Ik~~Kvv~LedLAa~F~lktqd~i-~RIq~Le~~g~lt   52 (72)
T d1wi9a_          15 YIKKSKVVLLEDLAFQMGLRTQDAI-NRIQDLLTEGTLT   52 (72)
T ss_dssp             HHHHCSEECHHHHHHHHCSCHHHHH-HHHHHHHHHSSSC
T ss_pred             HHHHCCEeeHHHHHHHcCCcHHHHH-HHHHHHHHCCCee
Confidence            3344556888999999999876655 7889999988874


No 89 
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=52.40  E-value=18  Score=26.75  Aligned_cols=73  Identities=12%  Similarity=0.079  Sum_probs=47.8

Q ss_pred             HHHhc-cccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCch
Q 012112          375 LMLSF-RTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPE  453 (471)
Q Consensus       375 ~~~~L-r~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~  453 (471)
                      ++..| +...++...++++++|.+.. .....++.|++.|||......                +  +.|.-.+.++ ..
T Consensus        26 iL~~L~~~~~~~t~~eLa~~~~i~~~-tvs~~l~~L~~~GlV~r~~~~----------------~--d~rg~~~~~~-~~   85 (109)
T d2d1ha1          26 VLLKMVEIEKPITSEELADIFKLSKT-TVENSLKKLIELGLVVRTKTE----------------G--KKIGRPKYYY-SI   85 (109)
T ss_dssp             HHHHHHHHCSCEEHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEEEC-------------------------CCEEE-EE
T ss_pred             HHHHHHHcCCCCCHHHHHHHHCccHh-HHHHHHHHHHHCCCEEEeecC----------------C--CCCceeEEEe-eC
Confidence            34344 33445999999999999865 467789999999999865321                0  1111246775 77


Q ss_pred             hhchHHHHHHHHHh
Q 012112          454 GFLLSNELISHAFG  467 (471)
Q Consensus       454 G~~~~n~i~~~~~~  467 (471)
                      |..+...+..+|-.
T Consensus        86 ~~~~~~~i~~~~~~   99 (109)
T d2d1ha1          86 SSNILEKIRNDLLN   99 (109)
T ss_dssp             CTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            77777777666543


No 90 
>d1u83a_ c.1.27.1 (A:) (2r)-phospho-3-sulfolactate synthase ComA {Bacillus subtilis [TaxId: 1423]}
Probab=52.19  E-value=28  Score=30.36  Aligned_cols=113  Identities=14%  Similarity=0.079  Sum_probs=72.3

Q ss_pred             eeEEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEe------cCCCCCHHHHHHHHHCCCCEEEEccCCCCHHH
Q 012112          115 LETVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEM------DPGTFDARKMEELMDLGVNRVSLGVQAFQDEL  188 (471)
Q Consensus       115 v~~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~------~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~  188 (471)
                      ++.+-||+||-. +.+. |.+-++..+++ +    +.+..-.      --...-++.++..++.|++.|.+.-=|.    
T Consensus        42 ID~vK~g~Gts~-l~~~-L~eKI~l~~~~-~----V~v~~GGtlfE~a~~~~~~~~y~~~~~~lGf~~iEiSdg~i----  110 (249)
T d1u83a_          42 IDFVKFGWGTSL-LTKD-LEEKISTLKEH-D----ITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTL----  110 (249)
T ss_dssp             CCEEEECTTGGG-GCTT-HHHHHHHHHHT-T----CEEEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSS----
T ss_pred             eeEEEecCceec-cCHH-HHHHHHHHHHc-C----CeEeCCCHHHHHHHHcCCHHHHHHHHHHcCCCEEEECCCcc----
Confidence            788999999954 4554 88888888764 2    2222211      0112347999999999999987765554    


Q ss_pred             HHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCC--C----CCCHHHHHHHHHHHHhCCCCcEE
Q 012112          189 LKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSL--P----HQTPQMWEESLRRTVGAQPKHVS  248 (471)
Q Consensus       189 L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl--P----gqT~e~~~~~l~~~~~l~p~his  248 (471)
                            ..+.++..+.++.+.+.|.  |-.-  +|-  |    -.+.++|.+.++..++.|.++|-
T Consensus       111 ------~i~~~~~~~~I~~~~~~~~--V~sE--vG~K~~~~~~~~~~~~~i~~~~~~LeaGA~~Vi  166 (249)
T d1u83a_         111 ------PMTNKEKAAYIADFSDEFL--VLSE--VGSKDAELASRQSSEEWLEYIVEDMEAGAEKVI  166 (249)
T ss_dssp             ------CCCHHHHHHHHHHHTTTSE--EEEE--CSCCC------CCSTHHHHHHHHHHHHTEEEEE
T ss_pred             ------cCCHHHHHHHHHHHHhcCe--eccc--cCCcCccccCCCCHHHHHHHHHHHHHCCCceEE
Confidence                  2455666777777777542  2111  122  1    12467888889999999877653


No 91 
>d2fswa1 a.4.5.69 (A:3-104) Hypothetical protein PG0823 {Porphyromonas gingivalis [TaxId: 837]}
Probab=52.06  E-value=19  Score=26.74  Aligned_cols=63  Identities=16%  Similarity=0.122  Sum_probs=41.6

Q ss_pred             CCHhhHHHHh-CCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHHH
Q 012112          385 VDLKSFGETF-GCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELIS  463 (471)
Q Consensus       385 i~~~~~~~~f-g~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~~  463 (471)
                      ....++++.. |++- ..+.+.|+.|++.|+|........                 --|+ ...|| ++|..+.. |+.
T Consensus        34 ~rF~el~~~l~gIs~-~~Ls~rLkeL~~~glv~r~~~~~~-----------------p~~v-eY~LT-~~G~~L~p-il~   92 (102)
T d2fswa1          34 IRYGELKRAIPGISE-KMLIDELKFLCGKGLIKKKQYPEV-----------------PPRV-EYSLT-PLGEKVLP-IID   92 (102)
T ss_dssp             EEHHHHHHHSTTCCH-HHHHHHHHHHHHTTSEEEEEECSS-----------------SCEE-EEEEC-HHHHTTHH-HHH
T ss_pred             CCHHHHHhhCcccch-hHHHHHHHHHHHCCceeecccCCC-----------------CCee-hhhhh-HhHHHHHH-HHH
Confidence            5567777775 6663 356788999999999986532211                 1111 36897 99999975 555


Q ss_pred             HHHhc
Q 012112          464 HAFGV  468 (471)
Q Consensus       464 ~~~~~  468 (471)
                      .+..|
T Consensus        93 ~l~~W   97 (102)
T d2fswa1          93 EIAKF   97 (102)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55544


No 92 
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=51.36  E-value=3.6  Score=40.14  Aligned_cols=61  Identities=16%  Similarity=0.170  Sum_probs=42.9

Q ss_pred             HHHHHHHHHCCCCEEEEc-cCCC---------------------CHHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEee
Q 012112          163 ARKMEELMDLGVNRVSLG-VQAF---------------------QDELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLD  219 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiG-vQS~---------------------~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~D  219 (471)
                      .++|.-|+++|||.|.|- |..+                     ++......... -+.+++.+.|+.++++||. |-+|
T Consensus       123 ~~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~-VIlD  201 (572)
T d1gjwa2         123 MLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIR-VILD  201 (572)
T ss_dssp             HHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred             HHhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcE-EEEE
Confidence            378899999999999764 2211                     11111111112 3578999999999999998 9999


Q ss_pred             eecCC
Q 012112          220 LISSL  224 (471)
Q Consensus       220 lI~Gl  224 (471)
                      ++++.
T Consensus       202 vV~NH  206 (572)
T d1gjwa2         202 FIPRT  206 (572)
T ss_dssp             ECTTE
T ss_pred             eeecc
Confidence            99975


No 93 
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=51.34  E-value=17  Score=24.35  Aligned_cols=36  Identities=8%  Similarity=0.039  Sum_probs=29.3

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEe
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~  418 (471)
                      ...+...++++.+|.+.. ...+.+++|.+.||+..+
T Consensus        19 ~~~v~~~~iA~~L~vs~~-SVs~mikrL~~~GlV~~~   54 (61)
T d2ev0a1          19 KGYARVSDIAEALAVHPS-SVTKMVQKLDKDEYLIYE   54 (61)
T ss_dssp             HSSCCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEC-
T ss_pred             CCCccHHHHHHHhCCCch-hHHHHHHHHHHCCCEEEc
Confidence            356888999999999865 456789999999999864


No 94 
>d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=51.19  E-value=3.5  Score=38.32  Aligned_cols=60  Identities=5%  Similarity=0.154  Sum_probs=42.1

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCCH-------------HHHHHcC-CCCCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQD-------------ELLKSCG-RAHGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~d-------------~~L~~l~-R~~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      ++|..|+++|||.|.|..  ||...             .-.-.+. +--+.+++.+.|+.+++.|++ |-+|+++..
T Consensus        47 ~kLdyL~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~-VilD~V~NH  122 (381)
T d2aaaa2          47 DHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMY-LMVDVVPDH  122 (381)
T ss_dssp             HTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCE-EEEEECCSB
T ss_pred             HHHHHHHHcCCCEEEeCCCccCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhc-ccccccccc
Confidence            667788888888887654  32111             1111122 234789999999999999998 999999865


No 95 
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=50.89  E-value=21  Score=24.59  Aligned_cols=37  Identities=8%  Similarity=0.070  Sum_probs=28.6

Q ss_pred             CCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecC
Q 012112          384 GVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDE  420 (471)
Q Consensus       384 gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~  420 (471)
                      .....++.+.||..=.......++.|++.|||....+
T Consensus        24 ~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r~~~   60 (71)
T d1jhfa1          24 PPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSG   60 (71)
T ss_dssp             CCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEECSS
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCeecCCC
Confidence            4778888899997433456778999999999997543


No 96 
>d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]}
Probab=50.51  E-value=7  Score=35.89  Aligned_cols=72  Identities=22%  Similarity=0.325  Sum_probs=51.2

Q ss_pred             EEEEecCCCCC--------HHHHHHHHHCCCCEEEEc-cC-CC-------CHHHHHHcCCC-CCHHHHHHHHHHHHHcCC
Q 012112          152 ISMEMDPGTFD--------ARKMEELMDLGVNRVSLG-VQ-AF-------QDELLKSCGRA-HGLKEVYEAIEIVKLCGV  213 (471)
Q Consensus       152 itiE~~P~~l~--------~e~l~~l~~~GvnrvsiG-vQ-S~-------~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~  213 (471)
                      |--|++|.+++        .++|..++++|||.|.|- |. +-       +..-...+.-. -+.+++.+.|+.|++.|+
T Consensus        13 viYe~~v~~f~~~Gd~~gi~~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi   92 (400)
T d1eh9a3          13 IIYEIHVGTFTPEGTFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGL   92 (400)
T ss_dssp             CEEEECTTTSSSSCSHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTC
T ss_pred             EEEEEehhhhCCCCCHHHHHHHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCC
Confidence            44566676664        377888999999999884 22 11       11122233332 378999999999999999


Q ss_pred             CeeEeeeecCC
Q 012112          214 ENWSLDLISSL  224 (471)
Q Consensus       214 ~~v~~DlI~Gl  224 (471)
                      . |-+|++++.
T Consensus        93 ~-VilD~V~NH  102 (400)
T d1eh9a3          93 G-VILDVVYNH  102 (400)
T ss_dssp             E-EEEEECCSC
T ss_pred             c-eeeeccccc
Confidence            8 999999985


No 97 
>d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]}
Probab=49.96  E-value=48  Score=28.89  Aligned_cols=145  Identities=13%  Similarity=0.052  Sum_probs=0.0

Q ss_pred             CHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHH
Q 012112          197 GLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQ  276 (471)
Q Consensus       197 t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~  276 (471)
                      +.++..++...+.+.|.+.|.+        |.-....+.++.+.+.+++-++--.|+|..-+.+......|+     .++
T Consensus        91 ~~~~~~~a~~~~~~~gadavk~--------eg~~~~~~~i~~l~~~gIPV~gHiGl~Pq~~~~~gG~r~~Gk-----~~e  157 (260)
T d1o66a_          91 SKEQAFAAAAELMAAGAHMVKL--------EGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGR-----GGK  157 (260)
T ss_dssp             CHHHHHHHHHHHHHTTCSEEEE--------ECSGGGHHHHHHHHHTTCCEEEEEESCGGGTTC----------------C
T ss_pred             hhHHHHHHHHHHHHhhhhhccc--------cchhhhhHHHHHHHHcCCeeEeecccccchheecCcceeccc-----cch


Q ss_pred             HHHHHHHHHHHHHHCCCceeccccccCCCcchhhhhhhhcCCCEEEEccCcccccC------------------CeEEEc
Q 012112          277 SANFYRMASSMLSSAGYRHYEISSYGEDGYECKHNLTYWKNKPFYGFGLGSASYLG------------------GLRFSR  338 (471)
Q Consensus       277 ~~~~~~~~~~~L~~~Gy~~yeis~fa~~g~~~~hn~~yw~~~~ylG~G~gA~s~~~------------------~~r~~n  338 (471)
                      ..++++.+.. |+++|---.++-.-...=.+-..+.   ..-|-+|+|.|...--.                  -.+|.|
T Consensus       158 ~~~l~~~a~~-le~AGa~~ivlE~Vp~~va~~It~~---~~iptIgIGaG~~cDGQvLv~~DllG~~~~~~Pkf~k~y~n  233 (260)
T d1o66a_         158 AQALLNDAKA-HDDAGAAVVLMECVLAELAKKVTET---VSCPTIGIGAGADCDGQVLVMHDMLGIFPGKTAKFVKNFMQ  233 (260)
T ss_dssp             HHHHHHHHHH-HHHTTCSEEEEESCCHHHHHHHHHH---CSSCEEEESSCSCSSEEEECHHHHTTCSSSSCCTTCCCSST
T ss_pred             hHHHHHHHHH-HHHhhhhehhhhhccHHHHHHHHhh---hcceeeeccCCCCCCeeEEehHHhhCCCCCCCCChHHHHHh


Q ss_pred             CCCh--HHHHHHHHHHhcCCCc
Q 012112          339 PRRM--KEFVDYVQNLEAGLVD  358 (471)
Q Consensus       339 ~~~~--~~y~~~~~~~~~g~~~  358 (471)
                      ....  +.+.+|.+.+.+|..|
T Consensus       234 ~~~~~~~A~~~y~~dV~~g~FP  255 (260)
T d1o66a_         234 GHDSVQAAVRAYVAEVKAKTFP  255 (260)
T ss_dssp             TCSSHHHHHHHHHHHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHHHHcCCCC


No 98 
>d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]}
Probab=49.88  E-value=2.9  Score=39.04  Aligned_cols=28  Identities=7%  Similarity=0.154  Sum_probs=25.6

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      -+.+++.+.|+.+++.|+. |-+|++++.
T Consensus       114 Gt~~dfk~LV~~aH~~Gi~-VilD~V~NH  141 (406)
T d3bmva4         114 GSFTDFQNLINTAHAHNIK-VIIDFAPNH  141 (406)
T ss_dssp             CCHHHHHHHHHHHHHTTCE-EEEEECTTE
T ss_pred             ccHHHHHHHHHHHHhcccc-ceeeeeccc
Confidence            3789999999999999998 999999875


No 99 
>d1lqaa_ c.1.7.1 (A:) Tas protein {Escherichia coli [TaxId: 562]}
Probab=49.34  E-value=42  Score=29.91  Aligned_cols=75  Identities=13%  Similarity=-0.009  Sum_probs=38.8

Q ss_pred             CCHHHHHHHHHH-HHhCCCCcEEEEecc-ccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCC-ceecccccc
Q 012112          227 QTPQMWEESLRR-TVGAQPKHVSVYDLQ-VEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGY-RHYEISSYG  302 (471)
Q Consensus       227 qT~e~~~~~l~~-~~~l~p~his~y~l~-~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy-~~yeis~fa  302 (471)
                      -+.+.+++.++. +..|+.++|-+|.+. +...+....................+.+ .+.+.|.+.|. .++.+|||.
T Consensus       105 ~~~~~i~~~~~~SL~rL~~d~iDl~~lH~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~~G~ir~iGvS~~~  182 (346)
T d1lqaa_         105 LDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTL-DALAEYQRAGKIRYIGVSNET  182 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSCHHHHH-HHHHHHHHTTSEEEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHHhCCCeeeeeehhccCcccccccccccccccccccccHHHHH-HHHHHHHhCCCeeEEEEeccC
Confidence            345667777765 345899999999875 3333332221111110111111112222 23455777884 567888874


No 100
>d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=48.99  E-value=4.3  Score=37.88  Aligned_cols=62  Identities=8%  Similarity=-0.037  Sum_probs=40.9

Q ss_pred             HHHHHHHHCCCCEEEEccC--CC---------CHHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          164 RKMEELMDLGVNRVSLGVQ--AF---------QDELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGvQ--S~---------~d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      ++|..|+++|||.|-|..=  +-         +..-...+... -+.+++.+.|+.+++.|++ |-+|++++.=+
T Consensus        57 ~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~-VilD~V~NH~~  130 (422)
T d1h3ga3          57 DHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMG-LIQDVVLSHIG  130 (422)
T ss_dssp             HTHHHHHHHTCCEEEECCCEECCCSSCGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCE-EEEEECCSBCC
T ss_pred             HhHHHHHHCCCCEEEeCCcccCCCCCCCCCCCCccccCCcccccCCHHHHHHHHHHHHHhCcc-ccccCcccccc
Confidence            4566666667776665431  10         11111234444 3889999999999999998 99999987644


No 101
>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}
Probab=48.46  E-value=4.8  Score=39.75  Aligned_cols=63  Identities=17%  Similarity=0.248  Sum_probs=46.4

Q ss_pred             HHHHHHHHHCCCCEEEEcc--CC---CCH-----HHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          163 ARKMEELMDLGVNRVSLGV--QA---FQD-----ELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGv--QS---~~d-----~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      .++|..|+++|||.|.|-.  +|   .++     .-...+... .|.+++.+.++.+++.||. |-+|++++.=+
T Consensus       116 ~~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~-VilD~V~NHts  189 (554)
T d1g5aa2         116 KDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGIS-AVVDFIFNHTS  189 (554)
T ss_dssp             HTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCE-EEEEECCSEEE
T ss_pred             HHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCE-EEEEECcCCCC
Confidence            4788999999999998754  33   111     112233333 3899999999999999997 99999998644


No 102
>d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=48.04  E-value=7.1  Score=35.69  Aligned_cols=60  Identities=13%  Similarity=0.220  Sum_probs=41.2

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCCHHH--------H---------HHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQDEL--------L---------KSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~d~~--------L---------~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      ++|..|+++|||-|-|..  ++.+...        .         ..+... -|.++..+.|+.|++.|++ |-+|+++.
T Consensus        32 ~kLdylk~LGv~~Iwl~Pv~~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~Gik-VIlD~V~N  110 (361)
T d1mxga2          32 SKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIK-VIADVVIN  110 (361)
T ss_dssp             HHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCE-EEEEECCS
T ss_pred             HHHHHHHhcCCCEEEeCcCeeCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCE-EEEEeeec
Confidence            566777777777776552  4333211        0         122222 3789999999999999998 99999987


Q ss_pred             C
Q 012112          224 L  224 (471)
Q Consensus       224 l  224 (471)
                      .
T Consensus       111 H  111 (361)
T d1mxga2         111 H  111 (361)
T ss_dssp             B
T ss_pred             c
Confidence            6


No 103
>d1stza1 a.4.5.51 (A:14-100) Heat-inducible transcription repressor HrcA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=47.89  E-value=40  Score=24.20  Aligned_cols=39  Identities=13%  Similarity=0.043  Sum_probs=30.8

Q ss_pred             ccccCCCCHhhHHHHhCCCh-HHHHHHHHHHHHHCCCEEE
Q 012112          379 FRTARGVDLKSFGETFGCSL-VHTLCKAYKPYIESGHVIC  417 (471)
Q Consensus       379 Lr~~~gi~~~~~~~~fg~~~-~~~~~~~~~~~~~~gll~~  417 (471)
                      +.....+.-..+.+.+|.++ ...+...+..|.+.|+|..
T Consensus        18 ~~~g~Pv~s~~i~~~~~l~~S~aTIRn~m~~LE~~G~l~~   57 (87)
T d1stza1          18 IENKKPVSSQRVLEVSNIEFSSATIRNDMKKLEYLGYIYQ   57 (87)
T ss_dssp             HHHCSCBCHHHHHHHSCCCSCHHHHHHHHHHHHHTTSEEC
T ss_pred             HHcCCccCHHHHHHHhCCCCCHHHHHHHHHHHHHCCcccC
Confidence            34556788888999888764 4467788999999999975


No 104
>d1tz9a_ c.1.15.6 (A:) Mannonate dehydratase UxuA {Enterococcus faecalis (Streptococcus faecalis) [TaxId: 1351]}
Probab=47.48  E-value=23  Score=32.58  Aligned_cols=83  Identities=11%  Similarity=0.097  Sum_probs=50.5

Q ss_pred             HHHHHHH-CCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeE--------eeeecCCCCC--CHHHHH
Q 012112          165 KMEELMD-LGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWS--------LDLISSLPHQ--TPQMWE  233 (471)
Q Consensus       165 ~l~~l~~-~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~--------~DlI~GlPgq--T~e~~~  233 (471)
                      .|+.+++ +|++.|--.+-.-.      .|..=+.+++.+..+.+.++|+. ++        =|+..|.|+-  -.+.++
T Consensus        16 ~L~~i~Q~~G~~~iv~~l~~~~------~G~~W~~~~i~~~k~~ie~~GL~-~~vvEs~pv~e~Ik~g~~~~~~~Ien~~   88 (353)
T d1tz9a_          16 PLKHIRQIPGITGVVGTLLNKL------PGDVWTVAEIQALKQSVEQEGLA-LLGIESVAIHDAIKAGTDQRDHYIDNYR   88 (353)
T ss_dssp             CHHHHTTSTTCCEEEECCSSSC------TTCCCCHHHHHHHHHHHHHTTCE-EEEECSCCCCHHHHHTCSTHHHHHHHHH
T ss_pred             cHHHHhhhcCCcchhhcCCCCC------CCCcCCHHHHHHHHHHHHHcCCE-EEEecCCCChHHhhcCCCcHHHHHHHHH
Confidence            3445566 37777654322221      13334677777777778888764 22        2455676653  356677


Q ss_pred             HHHHHHHhCCCCcEEEEecccc
Q 012112          234 ESLRRTVGAQPKHVSVYDLQVE  255 (471)
Q Consensus       234 ~~l~~~~~l~p~his~y~l~~~  255 (471)
                      ++|+.+-+.+++ +-+|.+++.
T Consensus        89 ~slrnla~aGI~-~icYNFmpv  109 (353)
T d1tz9a_          89 QTLRNLGKCGIS-LVCYSFKPI  109 (353)
T ss_dssp             HHHHHHHHTTCC-EEEECCCSS
T ss_pred             HHHHHHHHcCCC-EEEEEeccc
Confidence            888888888876 446777654


No 105
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=46.37  E-value=23  Score=24.11  Aligned_cols=45  Identities=9%  Similarity=-0.019  Sum_probs=38.1

Q ss_pred             HHHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEE
Q 012112          372 MDVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVIC  417 (471)
Q Consensus       372 ~e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~  417 (471)
                      ...++.-||...++...++.+..|.+.. .+...++.|++.||+..
T Consensus         7 ~~~Il~~i~~~g~~sr~eLa~~~gLS~~-Tvs~iv~~L~~~glv~e   51 (70)
T d1z6ra1           7 AGAVYRLIDQLGPVSRIDLSRLAQLAPA-SITKIVHEMLEAHLVQE   51 (70)
T ss_dssp             HHHHHHHHHSSCSCCHHHHHHHTTCCHH-HHHHHHHHHHHHTSEEE
T ss_pred             HHHHHHHHHHcCCcCHHHHHHHHCcCHH-HHHHHHHHHHHCCCEEe
Confidence            3456777888888999999999999975 46788999999999974


No 106
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=45.93  E-value=89  Score=26.96  Aligned_cols=51  Identities=10%  Similarity=0.216  Sum_probs=36.6

Q ss_pred             HHHHHHHHHCCCCEEEE--ccC-----------CCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          163 ARKMEELMDLGVNRVSL--GVQ-----------AFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       163 ~e~l~~l~~~Gvnrvsi--GvQ-----------S~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      ++.|+.|+++|+|-|-+  +.+           .+++..|         +.+.+.++.|+++|+. |-+|+...
T Consensus        42 ~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~~~~~~l---------~~ld~~l~~a~~~Gi~-vi~~l~~~  105 (370)
T d1rh9a1          42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMF---------QGLDFVISEAKKYGIH-LIMSLVNN  105 (370)
T ss_dssp             HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHH---------HHHHHHHHHHHHTTCE-EEEECCBS
T ss_pred             HHHHHHHHHCCCeEEEECCccCccCcccCCCCCcccHHHH---------HHHHHHHHHHHHcCCE-EEEecccc
Confidence            46799999999995544  222           2334443         5577889999999997 88888643


No 107
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.57  E-value=2.7  Score=23.65  Aligned_cols=11  Identities=36%  Similarity=1.171  Sum_probs=8.7

Q ss_pred             CcCCcCCCCCc
Q 012112           64 RKRCHYCDFPI   74 (471)
Q Consensus        64 ~~~C~yC~f~~   74 (471)
                      |+.|.+|.|.-
T Consensus         1 py~C~~CnF~F   11 (29)
T d1bboa2           1 PYHCTYCNFSF   11 (29)
T ss_dssp             CEECSSSSCEE
T ss_pred             CcccceeeeeE
Confidence            56799999863


No 108
>d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]}
Probab=45.44  E-value=8.4  Score=35.58  Aligned_cols=28  Identities=18%  Similarity=0.084  Sum_probs=25.3

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      -+.+++++.++.+++.|++ |-+|++++.
T Consensus        76 Gt~~df~~Lv~~~H~~Gi~-VilD~V~NH  103 (393)
T d1e43a2          76 GTKSELQDAIGSLHSRNVQ-VYGDVVLNH  103 (393)
T ss_dssp             CCHHHHHHHHHHHHHTTCE-EEEEECCSE
T ss_pred             CCHHHHHHHHHHHHHcCCE-EEEEEeecc
Confidence            3789999999999999998 999999875


No 109
>d2pg4a1 a.4.5.48 (A:1-92) Uncharacterized protein APE0880.1 {Aeropyrum pernix [TaxId: 56636]}
Probab=45.20  E-value=23  Score=24.31  Aligned_cols=55  Identities=18%  Similarity=0.148  Sum_probs=37.2

Q ss_pred             CCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHH
Q 012112          385 VDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNE  460 (471)
Q Consensus       385 i~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~  460 (471)
                      -+++++-+.-|.+-...|...-++++..|++..+.                    ..-|+--++|| ++|+.++.-
T Consensus        30 pslaeivkasgvsektffmglkdrliraglvkeet--------------------lsyrvktlklt-ekgrrlaec   84 (92)
T d2pg4a1          30 PSLAEIVKASGVSEKTFFMGLKDRLIRAGLVKEET--------------------LSYRVKTLKLT-EKGRRLAEC   84 (92)
T ss_dssp             CCHHHHHHHHCCCHHHHHTTHHHHHHHTTSEEEEE--------------------EETTEEEEEEC-HHHHHHHHH
T ss_pred             ccHHHHHHHcCcchhHHhhhhHHHHHHhhhhhHhH--------------------hhhhhhhhhhh-hhhhHHHHH
Confidence            44555555566665555566678899999997532                    12355568997 999998753


No 110
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=45.04  E-value=53  Score=28.93  Aligned_cols=139  Identities=10%  Similarity=0.019  Sum_probs=82.0

Q ss_pred             CCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCC-HHHHHHHHHCCCCEEEEc----cCCCCHHH---HHHcC------
Q 012112          128 VPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFD-ARKMEELMDLGVNRVSLG----VQAFQDEL---LKSCG------  193 (471)
Q Consensus       128 l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~-~e~l~~l~~~GvnrvsiG----vQS~~d~~---L~~l~------  193 (471)
                      .+++.+.++++.+++...    ..+.+-..|+.-+ .+..+.++++|++-|.+.    -....+..   ...++      
T Consensus       154 ~~~~~~~~i~~~v~~~~~----~pv~vKl~~~~~~~~~i~~~~~~~g~~gi~~~n~~~~~~~~~~~~~~~~~~~~~~~~~  229 (312)
T d1gtea2         154 QDPELVRNICRWVRQAVQ----IPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTT  229 (312)
T ss_dssp             GCHHHHHHHHHHHHHHCS----SCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBC
T ss_pred             hhHHHHHHHHHHHhhccC----CceeecccccchhHHHHHHHHHHhcccceEEEeecccccccccccccccccccccccc
Confidence            567889999999988743    4688888887554 455677889999888652    00010000   00000      


Q ss_pred             -----CCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCC-CCHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCC
Q 012112          194 -----RAHGLKEVYEAIEIVKLCGVENWSLDLISSLPH-QTPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPG  267 (471)
Q Consensus       194 -----R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg-qT~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g  267 (471)
                           -.....-..+.++.+++..-.   +. |+|.=| .|.+|..+    .+.++.+-|.+++-.+..|-         
T Consensus       230 ~gg~sG~~i~~~al~~v~~~~~~~~~---ip-Ii~~GGI~~~~d~~~----~l~aGA~~Vqv~ta~~~~G~---------  292 (312)
T d1gtea2         230 YGGVSGTAIRPIALRAVTTIARALPG---FP-ILATGGIDSAESGLQ----FLHSGASVLQVCSAVQNQDF---------  292 (312)
T ss_dssp             CEEEESGGGHHHHHHHHHHHHHHSTT---CC-EEEESSCCSHHHHHH----HHHTTCSEEEESHHHHTSCT---------
T ss_pred             cccccCcCcchhhHHHHHHHHHHcCC---Cc-EEEEcCCCCHHHHHH----HHHcCCCeeEECHhhhccCh---------
Confidence                 011234456777777776211   22 233323 24554443    34689999999864443332         


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCc
Q 012112          268 EFPLPTETQSANFYRMASSMLSSAGYR  294 (471)
Q Consensus       268 ~~~~p~~~~~~~~~~~~~~~L~~~Gy~  294 (471)
                             +...++.+...++|.++||+
T Consensus       293 -------~~i~~i~~~L~~~m~~~g~~  312 (312)
T d1gtea2         293 -------TVIQDYCTGLKALLYLKSIE  312 (312)
T ss_dssp             -------THHHHHHHHHHHHHHHTTCG
T ss_pred             -------HHHHHHHHHHHHHHHHcCCC
Confidence                   23455777888899999985


No 111
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]}
Probab=44.69  E-value=8  Score=35.10  Aligned_cols=62  Identities=11%  Similarity=0.056  Sum_probs=41.9

Q ss_pred             HHHHHHHHHCCCCEEEEcc--CCC---------CHHHHHHcCCCC-CHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          163 ARKMEELMDLGVNRVSLGV--QAF---------QDELLKSCGRAH-GLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGv--QS~---------~d~~L~~l~R~~-t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      ++..+-|+++||+.|-|-.  |+.         ++.-.+ +.... +.+++++.|+.|++.||+ |-+|+++..-+
T Consensus        18 ~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy~-vd~~~Gt~~dfk~LV~~aH~~GI~-VilDvV~NH~~   91 (354)
T d1g94a2          18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYE-LQSRGGNRAQFIDMVNRCSAAGVD-IYVDTLINHMA   91 (354)
T ss_dssp             HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCE-EEEEEECSEEC
T ss_pred             HHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcce-eCCCCCCHHHHHHHHHHHhccCce-eEEEeeccccc
Confidence            4444557777887775542  111         111122 44333 899999999999999998 99999998754


No 112
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=44.25  E-value=4.2  Score=37.83  Aligned_cols=60  Identities=17%  Similarity=0.111  Sum_probs=40.4

Q ss_pred             HHHHHHHHHCCCCEEEEccC--C-------------CCHHHHHHcC-CCCCHHHHHHHHHHHHHcCCCeeEeeeecCC
Q 012112          163 ARKMEELMDLGVNRVSLGVQ--A-------------FQDELLKSCG-RAHGLKEVYEAIEIVKLCGVENWSLDLISSL  224 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQ--S-------------~~d~~L~~l~-R~~t~~~~~~ai~~~~~~G~~~v~~DlI~Gl  224 (471)
                      .+..+.|+++||+.|-|..=  +             .++.-.+ +. |--|.++.++.|+.|++.||+ |-+|+++..
T Consensus        26 ~e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~-v~~~~Gt~~dfk~Lv~~aH~~GI~-VIlDvV~NH  101 (403)
T d1hx0a2          26 LECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYK-LCTRSGNENEFRDMVTRCNNVGVR-IYVDAVINH  101 (403)
T ss_dssp             HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCE-EEEEECCSE
T ss_pred             HHHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCc-cCCCCCCHHHHHHHHHHHHhcCCE-EEEEEeccc
Confidence            34444577777777766531  1             1111122 33 334899999999999999998 999999987


No 113
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=43.73  E-value=32  Score=25.37  Aligned_cols=44  Identities=11%  Similarity=0.101  Sum_probs=35.2

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEe
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~  418 (471)
                      .++..|....++...++++..|.+-.. .-..++.|++.||+...
T Consensus        24 ~v~~~L~~~g~~t~~eia~~~~i~~~~-v~~~l~~L~~~GlV~r~   67 (109)
T d1sfxa_          24 RIYSLLLERGGMRVSEIARELDLSARF-VRDRLKVLLKRGFVRRE   67 (109)
T ss_dssp             HHHHHHHHHCCBCHHHHHHHHTCCHHH-HHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHHhcCCCCHHHHHHHhCCCcch-HHHHHHHHHhCCCEEEE
Confidence            445555566789999999999998654 56789999999999754


No 114
>d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]}
Probab=41.86  E-value=4.2  Score=38.59  Aligned_cols=30  Identities=10%  Similarity=0.158  Sum_probs=26.1

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      -+.++..+.|+.|++.||. |-+|+++..=+
T Consensus       108 Gt~~d~~~LV~~aH~~GIr-VilD~V~NH~~  137 (475)
T d1bf2a3         108 GPTAEFQAMVQAFHNAGIK-VYMDVVYNHTA  137 (475)
T ss_dssp             HHHHHHHHHHHHHHHTTCE-EEEEECCSSCT
T ss_pred             CCHHHHHHHHHHHHhcCcE-EEEEecccccc
Confidence            3678899999999999997 99999998643


No 115
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]}
Probab=41.70  E-value=78  Score=27.09  Aligned_cols=88  Identities=15%  Similarity=0.093  Sum_probs=63.3

Q ss_pred             CCcEEEEEecCCCCCHHHHHHHHHCCCCEEEE--ccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCC
Q 012112          148 LDAEISMEMDPGTFDARKMEELMDLGVNRVSL--GVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLP  225 (471)
Q Consensus       148 ~~~eitiE~~P~~l~~e~l~~l~~~Gvnrvsi--GvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlP  225 (471)
                      ....+..-+.+..-+.+.+....+.|++.+-+  ..+.              .+...+.++.+++.|++ +.+.++... 
T Consensus        80 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--------------~~~~~~~~~~a~~~g~~-~~~~~~~~~-  143 (289)
T d1nvma2          80 SHAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTE--------------ADVSKQHIEYARNLGMD-TVGFLMMSH-  143 (289)
T ss_dssp             SSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEEETTC--------------GGGGHHHHHHHHHHTCE-EEEEEESTT-
T ss_pred             chhHHHHHHhhhhhhHHHHHHHHHhcccceEEEeehhh--------------hhhHhHHHHHHHHhCCc-eeeEeeecc-
Confidence            34567777777777888888888888875444  3332              33355678889999997 666555443 


Q ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEEe
Q 012112          226 HQTPQMWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       226 gqT~e~~~~~l~~~~~l~p~his~y~  251 (471)
                      .-+.+.+.+.++.+.+++++.|++-.
T Consensus       144 ~~~~~~~~~~~~~~~~~g~~~I~l~D  169 (289)
T d1nvma2         144 MIPAEKLAEQGKLMESYGATCIYMAD  169 (289)
T ss_dssp             SSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             ccCchhhhHHHHhhccccceeeeecc
Confidence            56788899999999999999877653


No 116
>d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]}
Probab=41.27  E-value=26  Score=30.48  Aligned_cols=117  Identities=15%  Similarity=0.293  Sum_probs=72.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCH-----HHHHHHHHCCCC--EEEEccCCCCHHHHHHcCCCCCHHHHHH
Q 012112          131 RFVSSILDTLTDKFGLSLDAEISMEMDPGTFDA-----RKMEELMDLGVN--RVSLGVQAFQDELLKSCGRAHGLKEVYE  203 (471)
Q Consensus       131 ~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~-----e~l~~l~~~Gvn--rvsiGvQS~~d~~L~~l~R~~t~~~~~~  203 (471)
                      +.+.++++..++     .+.++.+.++|..+..     +.+..+++.|++  |+-.|+   +.+....|-+.        
T Consensus        50 ~~~~~l~~~a~~-----~g~~vi~DIsp~~l~~lg~s~~dl~~~~~lGi~glRlD~Gf---~~~e~a~ms~n--------  113 (244)
T d1x7fa2          50 AEFKEIINHAKD-----NNMEVILDVAPAVFDQLGISYSDLSFFAELGADGIRLDVGF---DGLTEAKMTNN--------  113 (244)
T ss_dssp             HHHHHHHHHHHH-----TTCEEEEEECTTCC------CCCTHHHHHHTCSEEEESSCC---SSHHHHHHTTC--------
T ss_pred             HHHHHHHHHHHH-----CCCEEEEEcCHHHHHHhCCCHHHHHHHHHCCCCEEEEcCCC---ChHHHHHHhcC--------
Confidence            346677776665     3468999999998865     567888899987  455554   22222222211        


Q ss_pred             HHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCC---cEEEEeccccCCChhhhcccCCCCCCCCHHHHHHH
Q 012112          204 AIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPK---HVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANF  280 (471)
Q Consensus       204 ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~---his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~  280 (471)
                            ..|+. |.+..=    ..|     +.++.+++.+++   -+.++.+.|.|.|-+..                +.
T Consensus       114 ------~~~l~-I~LNaS----t~t-----~~l~~l~~~~~n~~~l~acHNFYPr~~TGLs~----------------~~  161 (244)
T d1x7fa2         114 ------PYGLK-IELNVS----NDI-----AYLENILSHQANKSALIGCHNFYPQKFTGLPY----------------DY  161 (244)
T ss_dssp             ------TTCCE-EEEETT----SCS-----SHHHHHTTSSCCGGGEEEECCCBCSTTCSBCH----------------HH
T ss_pred             ------CcCCE-EEEECC----cCH-----HHHHHHHHcCCChhheEEeeccCCCCCCCCCH----------------HH
Confidence                  12454 444321    122     236666777764   36788999999997653                46


Q ss_pred             HHHHHHHHHHCCCce
Q 012112          281 YRMASSMLSSAGYRH  295 (471)
Q Consensus       281 ~~~~~~~L~~~Gy~~  295 (471)
                      |...-+++++.|..-
T Consensus       162 f~~~n~~~k~~gi~t  176 (244)
T d1x7fa2         162 FIRCSERFKKHGIRS  176 (244)
T ss_dssp             HHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHcCCCE
Confidence            777888889988764


No 117
>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}
Probab=40.96  E-value=42  Score=28.62  Aligned_cols=85  Identities=6%  Similarity=-0.043  Sum_probs=55.9

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeee----c--CCCCC-----CHHH
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLI----S--SLPHQ-----TPQM  231 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI----~--GlPgq-----T~e~  231 (471)
                      .+.++..+++|++-|.|.+++  ++.  ...+..+.+++.+.-+.++++|+..+++-..    +  +-|.+     +.+.
T Consensus        15 ~~a~~~a~e~G~~~ieif~~~--P~~--w~~~~~~~~~~~~~k~~~~~~gl~~~~~~~~~p~~~n~~~~~~~~r~~s~~~   90 (285)
T d1qtwa_          15 ANAAIRAAEIDATAFALFTKN--QRQ--WRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDA   90 (285)
T ss_dssp             HHHHHHHHHTTCSEEECCSSC--SSC--SSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCEEEEECCC--CCC--CCCCCCCHHHHHHHHHHHHHcCCCcceeEecCCcccccccchHHHHHHHHHH
Confidence            467888899999999986654  111  2334567888888888888898863332211    1  12222     2455


Q ss_pred             HHHHHHHHHhCCCCcEEEEe
Q 012112          232 WEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       232 ~~~~l~~~~~l~p~his~y~  251 (471)
                      +++.++.+.+++++.+.+.+
T Consensus        91 ~~~~i~~a~~lG~~~vv~h~  110 (285)
T d1qtwa_          91 FIDEMQRCEQLGLSLLNFHP  110 (285)
T ss_dssp             HHHHHHHHHHTTCCEEEECC
T ss_pred             HHHHHHHHHHcCCCceeeec
Confidence            77778888899998877654


No 118
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]}
Probab=40.09  E-value=7.9  Score=36.53  Aligned_cols=70  Identities=9%  Similarity=0.153  Sum_probs=45.6

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCC------HHHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHH
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQ------DELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~------d~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~  234 (471)
                      ++|..|+++|||.|-|..  ++-.      ..-...+... -+.+++.+.|+.+++.|+. |-+|+++..=+.+-.-+..
T Consensus        35 ~kLdyLk~LGv~~I~L~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~-VilD~V~NH~~~~~~~f~~  113 (478)
T d1m53a2          35 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMR-LMIDVVINHTSDQHPWFIQ  113 (478)
T ss_dssp             HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCE-EEEEECCSBCCTTSHHHHH
T ss_pred             HhhHHHHHcCCCEEEECCCCCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCE-EEeccccccccccCchhhh
Confidence            566777777777776642  1100      0001112222 3789999999999999998 9999999987765544443


No 119
>d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]}
Probab=39.41  E-value=5.2  Score=37.91  Aligned_cols=71  Identities=15%  Similarity=0.188  Sum_probs=48.0

Q ss_pred             HHHHHHHHCCCCEEEEcc--CCCCH------HHHHHcCCC-CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHH
Q 012112          164 RKMEELMDLGVNRVSLGV--QAFQD------ELLKSCGRA-HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGv--QS~~d------~~L~~l~R~-~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~  234 (471)
                      ++|..|+++|||-|-|-.  ++-..      .-...+... -+.++..+.|+.|++.||. |-+|+++..-+.+-.-+..
T Consensus        35 ~kLdYLk~LGv~~I~l~Pi~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~-VilD~V~NH~~~~~~~~~~  113 (479)
T d1uoka2          35 SKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMK-LMMDLVVNHTSDEHNWFIE  113 (479)
T ss_dssp             TTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCE-EEEEECCSBCCTTSHHHHH
T ss_pred             HhhHHHHHcCCCEEEECCCcCCCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCE-EEecccccccccccchhhh
Confidence            456677777888776632  22111      111122222 3789999999999999998 9999999988877665554


Q ss_pred             H
Q 012112          235 S  235 (471)
Q Consensus       235 ~  235 (471)
                      .
T Consensus       114 ~  114 (479)
T d1uoka2         114 S  114 (479)
T ss_dssp             H
T ss_pred             h
Confidence            3


No 120
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=39.20  E-value=92  Score=26.83  Aligned_cols=16  Identities=6%  Similarity=-0.074  Sum_probs=8.8

Q ss_pred             chhhchHHHHHHHHHh
Q 012112          452 PEGFLLSNELISHAFG  467 (471)
Q Consensus       452 ~~G~~~~n~i~~~~~~  467 (471)
                      ++-+.-..++++++..
T Consensus       277 ~~~~~~l~~~l~~l~~  292 (295)
T d1hl2a_         277 EKYLPELKALAQQLMQ  292 (295)
T ss_dssp             GGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4555455566666554


No 121
>d1tbxa_ a.4.5.48 (A:) Hypothetical protein F93 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=37.96  E-value=50  Score=22.74  Aligned_cols=61  Identities=21%  Similarity=0.279  Sum_probs=39.7

Q ss_pred             ccccCCCCHhhHHHHhCCCh---HHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhh
Q 012112          379 FRTARGVDLKSFGETFGCSL---VHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGF  455 (471)
Q Consensus       379 Lr~~~gi~~~~~~~~fg~~~---~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~  455 (471)
                      |--++||-.-++-++-+.+|   ...|-.+-+.|++.|+++...+.                   |+.  ++.|| ++|.
T Consensus        15 ~ydnegiatydlykkvna~fpmstatfydakkfliqegfi~e~qe~-------------------gek--~~ylt-ekgk   72 (94)
T d1tbxa_          15 LYDNEGIATYDLYKKVNAEFPMSTATFYDAKKFLIQEGFVKERQER-------------------GEK--RLYLT-EKGK   72 (94)
T ss_dssp             HTTCTTCBHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTSEEEEEET-------------------TEE--EEEEC-HHHH
T ss_pred             EecCCCeehhhHHHHhcccCccchheehhhHHHHHHHHhHHHHHhc-------------------Cce--eEEEe-cCCe
Confidence            34568887766666544433   22355566789999999854321                   222  58997 9999


Q ss_pred             chHHHH
Q 012112          456 LLSNEL  461 (471)
Q Consensus       456 ~~~n~i  461 (471)
                      +++=++
T Consensus        73 lfaisl   78 (94)
T d1tbxa_          73 LFAISL   78 (94)
T ss_dssp             HHHHHH
T ss_pred             EEEEEe
Confidence            998554


No 122
>d1z7ua1 a.4.5.69 (A:1-108) Hypothetical protein EF0647 {Enterococcus faecalis [TaxId: 1351]}
Probab=37.82  E-value=34  Score=25.55  Aligned_cols=63  Identities=17%  Similarity=0.187  Sum_probs=41.0

Q ss_pred             CCCHhhHHHHh-CCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHHHHH
Q 012112          384 GVDLKSFGETF-GCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSNELI  462 (471)
Q Consensus       384 gi~~~~~~~~f-g~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n~i~  462 (471)
                      .....++.+.. |++- ..+...|+.|++.|+|........                 .-|+ ...|| ++|..+.. |+
T Consensus        32 ~~RF~el~~~l~gIS~-~~Ls~rLk~L~~~glv~R~~~~~~-----------------p~~v-eY~LT-~~G~~L~p-il   90 (108)
T d1z7ua1          32 TKRNGELMRALDGITQ-RVLTDRLREMEKDGLVHRESFNEL-----------------PPRV-EYTLT-PEGYALYD-AL   90 (108)
T ss_dssp             CBCHHHHHHHSTTCCH-HHHHHHHHHHHHHTSEEEEEECCS-----------------SCEE-EEEEC-HHHHHHHH-HH
T ss_pred             CCCHHHHHHHCcCCCh-hHHHHHHHHHHHCCcceeeccCCC-----------------ccee-hhhhc-hhHHHHHH-HH
Confidence            35567777775 6663 356788999999999986432111                 1121 36897 99999976 44


Q ss_pred             HHHHh
Q 012112          463 SHAFG  467 (471)
Q Consensus       463 ~~~~~  467 (471)
                      ..+..
T Consensus        91 ~~l~~   95 (108)
T d1z7ua1          91 SSLCH   95 (108)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443


No 123
>d1yyva1 a.4.5.69 (A:9-122) Putative transcriptional regulator YtfH {Salmonella typhimurium [TaxId: 90371]}
Probab=37.54  E-value=35  Score=25.74  Aligned_cols=72  Identities=13%  Similarity=0.185  Sum_probs=44.4

Q ss_pred             HHHhccccCCCCHhhHHHHh-CCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCch
Q 012112          375 LMLSFRTARGVDLKSFGETF-GCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPE  453 (471)
Q Consensus       375 ~~~~Lr~~~gi~~~~~~~~f-g~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~  453 (471)
                      |+..|. .......++.+.. |++- ..+...|+.|++.|+|........                 .-|+ ...|| ++
T Consensus        29 Il~~L~-~g~~RF~el~~~l~gis~-~~Ls~rL~~Le~~glv~R~~~~~~-----------------p~~v-eY~LT-~~   87 (114)
T d1yyva1          29 ILVALR-DGTHRFSDLRRKMGGVSE-KMLAQSLQALEQDGFLNRVSYPVV-----------------PPHV-EYSLT-PL   87 (114)
T ss_dssp             HHHHGG-GCCEEHHHHHHHSTTCCH-HHHHHHHHHHHHHTCEEEEEECSS-----------------SCEE-EEEEC-HH
T ss_pred             HHHHHh-cCCCCHHHHHHHccccch-hHHHHHHHHHHHHHHHhhcccCCC-----------------Cchh-HhHhh-Hh
Confidence            444453 2235567777776 5653 356788999999999986542211                 1111 26897 99


Q ss_pred             hhchHHHHHHHHHhc
Q 012112          454 GFLLSNELISHAFGV  468 (471)
Q Consensus       454 G~~~~n~i~~~~~~~  468 (471)
                      |..+.. |+..+..|
T Consensus        88 G~~L~~-il~~l~~W  101 (114)
T d1yyva1          88 GEQVSD-KVAALADW  101 (114)
T ss_dssp             HHHHHH-HHHHHHHH
T ss_pred             HHHHHH-HHHHHHHH
Confidence            999975 44444443


No 124
>d2v9va2 a.4.5.35 (A:438-510) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=37.30  E-value=28  Score=23.80  Aligned_cols=38  Identities=8%  Similarity=0.125  Sum_probs=30.5

Q ss_pred             ccCCCCHhhHHHHhCCCh-HHHHHHHHHHHHHCCCEEEe
Q 012112          381 TARGVDLKSFGETFGCSL-VHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       381 ~~~gi~~~~~~~~fg~~~-~~~~~~~~~~~~~~gll~~~  418 (471)
                      ...|++.+++..+++..+ ...|...++.|+++|.|...
T Consensus        23 ~~~G~~keeLr~~l~~~~~~~~f~~lL~~l~~~g~l~~~   61 (73)
T d2v9va2          23 LRPGLAREELRSRYFSRLPARVYQALLEEWSREGRLQLA   61 (73)
T ss_dssp             TSSCEEHHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEC
T ss_pred             cccCCCHHHHHHHhcccCCHHHHHHHHHHHHHCCChhee
Confidence            457999999999986554 44567789999999999864


No 125
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=35.58  E-value=49  Score=29.19  Aligned_cols=113  Identities=17%  Similarity=0.237  Sum_probs=67.5

Q ss_pred             eeEEEEcCCC--C--CCCCH-HHHHHHH---HHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCC---EEEEccCC
Q 012112          115 LETVFFGGGT--P--SLVPP-RFVSSIL---DTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVN---RVSLGVQA  183 (471)
Q Consensus       115 v~~i~fGGGT--p--s~l~~-~~l~~ll---~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~Gvn---rvsiGvQS  183 (471)
                      .+-|-+||-.  |  ...++ +++.++.   +.|++.++    ..++|.    |...+.++..-++|++   -|| |.+ 
T Consensus        52 AdiIDIGgeSTrPga~~vs~eeE~~Rl~pvi~~l~~~~~----~~iSID----T~~~eVa~~al~~Ga~iINDvs-g~~-  121 (282)
T d1ajza_          52 ATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE----VWISVD----TSKPEVIRESAKVGAHIINDIR-SLS-  121 (282)
T ss_dssp             CSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC----CEEEEE----CCCHHHHHHHHHTTCCEECCTT-TTC-
T ss_pred             CCEEEECCccccccccCCcHHHHHHHHHHHHHHHhhccc----ceEEEE----ecChHHHHHHHhcCceEEechh-hcc-
Confidence            4566677643  2  12333 4566654   55555443    346665    6678888888899964   456 654 


Q ss_pred             CCHHHHHHc----------C-CC--C------C--------HHHHHHHHHHHHHcCC--CeeEeeeecCCCCCCHHHHHH
Q 012112          184 FQDELLKSC----------G-RA--H------G--------LKEVYEAIEIVKLCGV--ENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       184 ~~d~~L~~l----------~-R~--~------t--------~~~~~~ai~~~~~~G~--~~v~~DlI~GlPgqT~e~~~~  234 (471)
                       +++.++.+          . ++  .      .        .+...+.++.+.++|+  ++|-+|-=+|+ |-|.++=.+
T Consensus       122 -~~~~~~~va~~~~~~vlmh~~g~p~~~~~~~~y~dv~~~v~~~~~~~~~~~~~~GI~~~~IilDPGiGF-gK~~~~n~~  199 (282)
T d1ajza_         122 -EPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF-GKNLSHNYS  199 (282)
T ss_dssp             -STTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHHHHHH
T ss_pred             -cchhHHHhhccCceEEEeccCCCccccccCCcccchhhhhHHHHHHHHHHHHHcCCcHhhEecCCCcCc-CCChhhhHH
Confidence             45555432          1 10  0      0        2455667778888999  67899999999 766655444


Q ss_pred             HHHHH
Q 012112          235 SLRRT  239 (471)
Q Consensus       235 ~l~~~  239 (471)
                      .++.+
T Consensus       200 ll~~l  204 (282)
T d1ajza_         200 LLARL  204 (282)
T ss_dssp             HHHTG
T ss_pred             HHhhc
Confidence            44433


No 126
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]}
Probab=35.47  E-value=68  Score=27.56  Aligned_cols=89  Identities=12%  Similarity=0.116  Sum_probs=62.9

Q ss_pred             cEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHH-HcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCC
Q 012112          150 AEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLK-SCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQT  228 (471)
Q Consensus       150 ~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~-~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT  228 (471)
                      .++.+|+.|   +++.++...+.--+.+.+=.+.=++-+=. -++-....+.....++.+++.|+. ||+-+=   |.  
T Consensus        66 ~~lNlE~a~---~~e~i~ia~~~kP~qvtLVPe~r~elTTegGld~~~~~~~L~~~i~~l~~~gir-vSLFiD---pd--  136 (242)
T d1m5wa_          66 TRMNLEMAV---TEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQ-VSLFID---AD--  136 (242)
T ss_dssp             SEEEEEECS---SHHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCE-EEEEEC---SC--
T ss_pred             ccccccccc---chhHHHHHHHhccceEEEeecCccccCcCCceeehhhHHHHHHHHHHHHhcCCe-EEEEec---cc--
Confidence            578888877   78888888888888888866553321110 011122357788999999999997 887442   22  


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEe
Q 012112          229 PQMWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       229 ~e~~~~~l~~~~~l~p~his~y~  251 (471)
                          .+.++.+.++++|.|-+|.
T Consensus       137 ----~~~i~~a~~lGad~IElhT  155 (242)
T d1m5wa_         137 ----EEQIKAAAEVGAPFIEIHT  155 (242)
T ss_dssp             ----HHHHHHHHHTTCSEEEEEC
T ss_pred             ----hhhHHHHhhcCcceeeeec
Confidence                3578889999999999996


No 127
>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.46  E-value=66  Score=27.93  Aligned_cols=93  Identities=14%  Similarity=0.059  Sum_probs=60.3

Q ss_pred             EEEEcCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHc----
Q 012112          117 TVFFGGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSC----  192 (471)
Q Consensus       117 ~i~fGGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l----  192 (471)
                      |||+-  |||.-.+.+..+|.+.....-.+.+-.-|-+| .++..+++.-+.|++.|++...+++.+-+..-++..    
T Consensus         2 TIyvV--TPTY~R~~Q~a~LtRLa~TL~lVp~l~WIVVE-Da~~~t~~v~~lL~~sgl~y~HL~~~tp~~~~~~~~~~~~   78 (261)
T d3cu0a1           2 TIYVV--TPTYARLVQKAELVRLSQTLSLVPRLHWLLVE-DAEGPTPLVSGLLAASGLLFTHLVVLTPKAQRLREGEPGW   78 (261)
T ss_dssp             EEEEE--EEECCSTTHHHHHHHHHHHHTTSSSEEEEEEE-SSSSCCHHHHHHHHHHCSEEEEEECCCC-----------C
T ss_pred             eEEEE--CCCCCCchhHHHHHHHHHHHhcCCCeeEEEEE-CCCCCCHHHHHHHHHcCCceEEeecCCchhhcccccCccc
Confidence            45654  88887776666665554444344332334444 456789999999999999999999988766655543    


Q ss_pred             CCCCCHHHHHHHHHHHHHcC
Q 012112          193 GRAHGLKEVYEAIEIVKLCG  212 (471)
Q Consensus       193 ~R~~t~~~~~~ai~~~~~~G  212 (471)
                      .+....++--.|++.+++..
T Consensus        79 ~~prgv~qRn~aL~~ir~~~   98 (261)
T d3cu0a1          79 VHPRGVEQRNKALDWLRGRG   98 (261)
T ss_dssp             CCCCSHHHHHHHHHHHTTCC
T ss_pred             ccccCHHHHHHHHHHHHHcc
Confidence            23456788899999999873


No 128
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=35.41  E-value=1.3e+02  Score=25.71  Aligned_cols=87  Identities=9%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             CeeEEEEcCCC--CCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCC--CHHHHHHHHHCCCCEEEEccCCCCHHHH
Q 012112          114 PLETVFFGGGT--PSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTF--DARKMEELMDLGVNRVSLGVQAFQDELL  189 (471)
Q Consensus       114 ~v~~i~fGGGT--ps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l--~~e~l~~l~~~GvnrvsiGvQS~~d~~L  189 (471)
                      +++.++++|.|  ...|+.++-.++++.+.+..+  .+..+-+-+...+.  +-+..+..+++|++.+.+..=.+.    
T Consensus        37 Gv~gl~~~G~tGE~~~Ls~~Er~~l~~~~~~~~~--~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~ilv~pP~~~----  110 (292)
T d1xkya1          37 GTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVD--KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYN----  110 (292)
T ss_dssp             TCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSS----
T ss_pred             CCCEEEECeEccchhhCCHHHHHHHHHHHHHHhC--CCceEEEecCcccHHHHHHHHHHHHHcCCCEEEECCCCCC----
Confidence            37889998866  466899999999988876542  23344444433222  225566666777777766543321    


Q ss_pred             HHcCCCCCHHHHHHHHHHHHHc
Q 012112          190 KSCGRAHGLKEVYEAIEIVKLC  211 (471)
Q Consensus       190 ~~l~R~~t~~~~~~ai~~~~~~  211 (471)
                           ..+.+++.+-.+.+.++
T Consensus       111 -----~~s~~~i~~~~~~v~~~  127 (292)
T d1xkya1         111 -----KPSQEGMYQHFKAIAES  127 (292)
T ss_dssp             -----CCCHHHHHHHHHHHHHT
T ss_pred             -----CCCHHHHHHHHHHHhcc
Confidence                 23455555555544443


No 129
>d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=35.16  E-value=39  Score=29.60  Aligned_cols=55  Identities=15%  Similarity=0.146  Sum_probs=26.8

Q ss_pred             HHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeee
Q 012112          164 RKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDL  220 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~Dl  220 (471)
                      +..+.|.+.|.+-|-||-||..+..- .+.-..-.+.+..+++.+++.+.. ||+|-
T Consensus        29 ~~a~~~~~~GAdiIDIGgeSTrPga~-~is~~eE~~Rl~p~i~~~~~~~~~-iSIDT   83 (270)
T d1eyea_          29 KHGLAMAAAGAGIVDVGGESSRPGAT-RVDPAVETSRVIPVVKELAAQGIT-VSIDT   83 (270)
T ss_dssp             HHHHHHHHTTCSEEEEECC---------------HHHHHHHHHHHHHTTCC-EEEEC
T ss_pred             HHHHHHHHCCCCEEEECCccCCCCCE-eeechhhcccccceeeeeccccee-echHh
Confidence            44667777788888888888777432 122222334445555666666665 66653


No 130
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=35.07  E-value=1e+02  Score=26.59  Aligned_cols=86  Identities=19%  Similarity=0.196  Sum_probs=58.1

Q ss_pred             cEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHH----cCCC-eeEeeeecCC
Q 012112          150 AEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKL----CGVE-NWSLDLISSL  224 (471)
Q Consensus       150 ~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~----~G~~-~v~~DlI~Gl  224 (471)
                      ..|-+-.-|.+-+.+.|+.|.++|+|-+-|.+=..+.+            +..+.++.+|+    .|.. .+-.|+ -|.
T Consensus        21 TKIIaTiGPas~~~~~l~~li~aGvdv~RiN~SHg~~e------------~~~~~i~~iR~~~~~~g~~v~i~~d~-~gp   87 (258)
T d1pkla2          21 ARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHE------------YHQTTINNVRQAAAELGVNIAIALDT-KGP   87 (258)
T ss_dssp             SEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHH------------HHHHHHHHHHHHHHHTTCCCEEEEEC-CCC
T ss_pred             CcEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHH------------HHHHHHHHHHHHHHHhCCCccccccc-ccc
Confidence            46777778999999999999999999777766665543            33334443333    3543 133333 355


Q ss_pred             CCCCHHHHHHHHHHHHhCCCCcEEE
Q 012112          225 PHQTPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       225 PgqT~e~~~~~l~~~~~l~p~his~  249 (471)
                      |.-|..+. .+++++.+.++|.|.+
T Consensus        88 ~~~t~kd~-~di~~a~~~~vD~ial  111 (258)
T d1pkla2          88 PAVSAKDR-VDLQFGVEQGVDMIFA  111 (258)
T ss_dssp             CSSCHHHH-HHHHHHHHHTCSEEEE
T ss_pred             ccccccHH-HHHHHHHhcCCCeEEE
Confidence            66676665 5789999999997764


No 131
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.93  E-value=1.3e+02  Score=25.76  Aligned_cols=53  Identities=8%  Similarity=-0.018  Sum_probs=22.7

Q ss_pred             HHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEe
Q 012112          198 LKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       198 ~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~  251 (471)
                      .+++.+..+.+.++|.+.+-+-.=+-++ -|.+++.+-.+.+.+.-.-.|-+|.
T Consensus        88 ~~~~i~~a~~a~~~Gad~v~i~~P~~~~-~~~~~l~~~~~~v~~~~~~pi~lYn  140 (296)
T d1xxxa1          88 TAHSIRLAKACAAEGAHGLLVVTPYYSK-PPQRGLQAHFTAVADATELPMLLYD  140 (296)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEEECCCSSC-CCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred             hHHHHHHHHHHHHhcCCeEEEEeccCCC-CCHHHHHHHHHHHHHhcCCCEEEEE
Confidence            4555555555555555532221111111 2445555555555544322344443


No 132
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}
Probab=34.55  E-value=19  Score=31.45  Aligned_cols=62  Identities=18%  Similarity=0.137  Sum_probs=40.6

Q ss_pred             cCCCCCH----HHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeee
Q 012112          157 DPGTFDA----RKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLI  221 (471)
Q Consensus       157 ~P~~l~~----e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI  221 (471)
                      +|+..++    +.++.|+++|+|.+-+++=+ -.++... .-..+.+...+.|+.+++.|++ +-+.|.
T Consensus         7 ~p~~~~~~~~~~D~~~~~~~G~n~vR~~i~~-W~~iep~-~G~~~~~~~d~~i~~~~~~Gi~-~iv~l~   72 (393)
T d1kwga2           7 YPEHWPKERWKEDARRMREAGLSHVRIGEFA-WALLEPE-PGRLEWGWLDEAIATLAAEGLK-VVLGTP   72 (393)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHTCCEEEECTTC-HHHHCSB-TTBCCCHHHHHHHHHHHTTTCE-EEEECS
T ss_pred             CcccCCHHHHHHHHHHHHHcCCCEEEecccc-hhhcCCC-CCccCHHHHHHHHHHHHHCCCE-EEEEcC
Confidence            5655554    44889999999988877511 1111111 1134567888999999999997 655554


No 133
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=34.44  E-value=59  Score=21.58  Aligned_cols=47  Identities=9%  Similarity=0.022  Sum_probs=35.7

Q ss_pred             HHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCccc
Q 012112          376 MLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRR  423 (471)
Q Consensus       376 ~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~  423 (471)
                      +..|....+++.+.|++.+|.+=. ..-+.++-+-..|+....++.|+
T Consensus        10 i~~l~~~g~~~v~~frd~~g~sRK-~ai~lLE~~D~~~~T~R~gd~Rv   56 (60)
T d1lvaa4          10 IKNLASTGPFGLAEARDALGSSRK-YVLPLLEYLDQVKFTRRVGDKRV   56 (60)
T ss_dssp             HHHHHTTSCBCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEETTEEE
T ss_pred             HHHHHhcCCCcHHHHHHHHCccHH-HHHHHHHHHhhcCCeEeeCCEEE
Confidence            345666778999999999999853 33467888889999887765543


No 134
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}
Probab=34.02  E-value=37  Score=30.09  Aligned_cols=59  Identities=17%  Similarity=0.146  Sum_probs=35.7

Q ss_pred             HHHHHHHHHCCCC--EEEEccCCCCHH------HHHHcCCCC--CHHHHHHHHHHHHHcCCCeeEeeeec
Q 012112          163 ARKMEELMDLGVN--RVSLGVQAFQDE------LLKSCGRAH--GLKEVYEAIEIVKLCGVENWSLDLIS  222 (471)
Q Consensus       163 ~e~l~~l~~~Gvn--rvsiGvQS~~d~------~L~~l~R~~--t~~~~~~ai~~~~~~G~~~v~~DlI~  222 (471)
                      ++.++.|+++|+|  |+.++.......      .-...+.-.  ..+.+.+.++.+++.|+. |-+|+..
T Consensus        44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g~~de~gl~~~d~~l~~a~~~Gi~-vi~~l~~  112 (410)
T d1uuqa_          44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMT-VVLYFNN  112 (410)
T ss_dssp             HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCE-EEEECCB
T ss_pred             HHHHHHHHHCCCcEEEeCCcccccccccccCCCcccccccccHHHHHHHHHHHHHHHHcCCe-eEEeccc
Confidence            4568899999999  444443322111      111111110  145567889999999997 8888864


No 135
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.99  E-value=5.3  Score=22.26  Aligned_cols=11  Identities=18%  Similarity=0.754  Sum_probs=7.3

Q ss_pred             CcCCcCCCCCc
Q 012112           64 RKRCHYCDFPI   74 (471)
Q Consensus        64 ~~~C~yC~f~~   74 (471)
                      |++|.+|.|.+
T Consensus         3 pfkcqlcsy~s   13 (29)
T d2dmda3           3 PFKCQICPYAS   13 (29)
T ss_dssp             CEECSSSSCEE
T ss_pred             cceeeeccccc
Confidence            56777777653


No 136
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=33.75  E-value=33  Score=24.82  Aligned_cols=53  Identities=13%  Similarity=0.113  Sum_probs=40.4

Q ss_pred             CCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHH
Q 012112          383 RGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSN  459 (471)
Q Consensus       383 ~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n  459 (471)
                      ..+..+++.++.|.+.. .+...++.+...|+++..++++                      +.+++| +.|.+++|
T Consensus        39 gp~t~~eLA~~~g~~~~-~l~rLlr~L~a~gll~~~~d~~----------------------~~~~~t-~~g~lL~d   91 (92)
T d1qzza1          39 GADTLAGLADRTDTHPQ-ALSRLVRHLTVVGVLEGGEKQG----------------------RPLRPT-RLGMLLAD   91 (92)
T ss_dssp             TCCSHHHHHHHHTCCHH-HHHHHHHHHHHTTSEECCCC-C----------------------CCCEEC-TTGGGGST
T ss_pred             CCCCHHHHHHHHCcCch-HHHHHHHHHHHCCCeeeecCCC----------------------ceeccc-HHHHhccC
Confidence            46999999999999864 4677889999999998654322                      236786 89988864


No 137
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=33.69  E-value=32  Score=29.17  Aligned_cols=127  Identities=16%  Similarity=0.137  Sum_probs=73.0

Q ss_pred             HHHHHHHhccCCCCCCCCeeEEEEcCCCC--C-CCCHHHHHHHHHHHHHHcCCCCCcEEEEEe-cCCCCCHHHHHHHHHC
Q 012112           97 LLCREIIATKPGHKTSPPLETVFFGGGTP--S-LVPPRFVSSILDTLTDKFGLSLDAEISMEM-DPGTFDARKMEELMDL  172 (471)
Q Consensus        97 ~l~~Ei~~~~~~~~~~~~v~~i~fGGGTp--s-~l~~~~l~~ll~~l~~~~~l~~~~eitiE~-~P~~l~~e~l~~l~~~  172 (471)
                      .|.+|++...+.   +...-++-+-+|++  + .+.++    .++.+++....  ..++.+.+ +|    .+.+..+.++
T Consensus        15 ~l~~ei~~l~~~---~~d~iHiDimDg~Fvpn~t~~~~----~i~~i~~~~~~--~~dvHLMv~~p----~~~i~~~~~~   81 (220)
T d1h1ya_          15 NLAAEADRMVRL---GADWLHMDIMDGHFVPNLTIGAP----VIQSLRKHTKA--YLDCHLMVTNP----SDYVEPLAKA   81 (220)
T ss_dssp             GHHHHHHHHHHT---TCSEEEEEEEBSSSSSCBCBCHH----HHHHHHTTCCS--EEEEEEESSCG----GGGHHHHHHH
T ss_pred             HHHHHHHHHHHc---CCCEEEEeeecCccccccccCch----hhhhhhhhcch--hhhhHHHhcch----hhhhHHhhhc
Confidence            355566544321   11233444668875  2 22343    44555654432  24666665 55    4678889999


Q ss_pred             CCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCC-CCcEEEEe
Q 012112          173 GVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQ-PKHVSVYD  251 (471)
Q Consensus       173 GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~-p~his~y~  251 (471)
                      |+++|++-+|+..+             +..+.++.+++.|.. +.+-+-.+.|-   +.+..-   +..++ ++.|-+  
T Consensus        82 g~~~I~~H~E~~~~-------------~~~~~i~~i~~~g~~-~Glal~p~t~~---~~~~~~---l~~~~~~d~vli--  139 (220)
T d1h1ya_          82 GASGFTFHIEVSRD-------------NWQELIQSIKAKGMR-PGVSLRPGTPV---EEVFPL---VEAENPVELVLV--  139 (220)
T ss_dssp             TCSEEEEEGGGCTT-------------THHHHHHHHHHTTCE-EEEEECTTSCG---GGGHHH---HHSSSCCSEEEE--
T ss_pred             ccceeeecccccch-------------hHHHHHHHHHHcCCC-cceeeccccch---hHHHHH---HhcccccceEEE--
Confidence            99999999997533             234567788899886 67666544443   333322   22222 455554  


Q ss_pred             ccccCCC
Q 012112          252 LQVEQGT  258 (471)
Q Consensus       252 l~~~pgT  258 (471)
                      +++.||.
T Consensus       140 m~v~PG~  146 (220)
T d1h1ya_         140 MTVEPGF  146 (220)
T ss_dssp             ESSCTTC
T ss_pred             EecCCCC
Confidence            4567774


No 138
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=33.47  E-value=51  Score=22.11  Aligned_cols=34  Identities=18%  Similarity=0.084  Sum_probs=25.2

Q ss_pred             CCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEec
Q 012112          385 VDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLD  419 (471)
Q Consensus       385 i~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~  419 (471)
                      +...+++++||.+-. .+.+++..|.++|+|+...
T Consensus        26 l~~~~La~~~~vSr~-tvr~Al~~L~~~Gli~~~~   59 (69)
T d2hs5a1          26 LSEPDICAALDVSRN-TVREAFQILIEDRLVAHEL   59 (69)
T ss_dssp             ECHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEET
T ss_pred             cCHHHHHHHHCCCHH-HHHHHHHHHHHCCcEEEEc
Confidence            445566677777743 4678899999999998754


No 139
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=33.46  E-value=1.4e+02  Score=25.54  Aligned_cols=113  Identities=12%  Similarity=0.149  Sum_probs=71.8

Q ss_pred             eeEEEEcCCC--CCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCC--CHHHHHHHHHCCCCEEEEccCCCCHHHHH
Q 012112          115 LETVFFGGGT--PSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTF--DARKMEELMDLGVNRVSLGVQAFQDELLK  190 (471)
Q Consensus       115 v~~i~fGGGT--ps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l--~~e~l~~l~~~GvnrvsiGvQS~~d~~L~  190 (471)
                      ++.++++|.|  ...|+.++-.++++.+.+..+  ....+-+-+...+.  +.+..+..+++|++.+.+-...+.     
T Consensus        39 v~gi~v~GttGE~~~Ls~~Er~~l~~~~~~~~~--~~~~vi~gv~~~s~~~~iela~~a~~~Gad~i~~~pP~~~-----  111 (293)
T d1f74a_          39 VDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK--DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYY-----  111 (293)
T ss_dssp             CSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT--TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEECCCCCSS-----
T ss_pred             CCEEEECccCcchhhCCHHHHhhhhheeecccc--CccccccccccccHHHHHHHHHHHHHcCCCEeeccCcccc-----
Confidence            7788998765  456799999999988777653  34455554433333  346777888899998877666652     


Q ss_pred             HcCCCCCHHHHHHHHHHHHH-cCCCeeEeeeecCCCCCCHHH-HHHHHHHHHhC
Q 012112          191 SCGRAHGLKEVYEAIEIVKL-CGVENWSLDLISSLPHQTPQM-WEESLRRTVGA  242 (471)
Q Consensus       191 ~l~R~~t~~~~~~ai~~~~~-~G~~~v~~DlI~GlPgqT~e~-~~~~l~~~~~l  242 (471)
                          ..+.+++.+-.+.+.+ .+.. +   +||..|.-|--+ -.+.+..+.+.
T Consensus       112 ----~~s~~~~~~~~~~v~~~~~~p-i---~iYn~P~~tg~~l~~~~l~~L~~~  157 (293)
T d1f74a_         112 ----KFSFPEIKHYYDTIIAETGSN-M---IVYSIPFLTGVNMGIEQFGELYKN  157 (293)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHCCC-E---EEECCSSCSCHHHHHHHHHHHHTS
T ss_pred             ----ccchHHHHHHHhcccccCCce-E---EEEeeccceeccccchhhhhhhhc
Confidence                2456666666655443 3554 2   678888765322 23445555543


No 140
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=33.27  E-value=8.9  Score=33.44  Aligned_cols=83  Identities=19%  Similarity=0.194  Sum_probs=45.1

Q ss_pred             HHHHHHHHCCCCEEEEc--cCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHh
Q 012112          164 RKMEELMDLGVNRVSLG--VQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVG  241 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiG--vQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~  241 (471)
                      ..++..+..|+..|.+.  ....+...-+.  +....+.+.+..+.+++.|+. +.+-. .|.|+....++.+.++.+.+
T Consensus        88 ~~i~~a~~lG~~~i~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~a~~~Gv~-l~lE~-~~~~~~~~~~~~~~~~ll~~  163 (278)
T d1i60a_          88 GMMETCKTLGVKYVVAVPLVTEQKIVKEEI--KKSSVDVLTELSDIAEPYGVK-IALEF-VGHPQCTVNTFEQAYEIVNT  163 (278)
T ss_dssp             HHHHHHHHHTCCEEEEECCBCSSCCCHHHH--HHHHHHHHHHHHHHHGGGTCE-EEEEC-CCCTTBSSCSHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCccccccccCCCCCCHHHH--HHHHHHHHHHHHHHHHHhCCe-eeeee-ccccccccCCHHHHHHHHHH
Confidence            35666677788887653  22211100000  011234455566677788886 66654 25555444555556666667


Q ss_pred             CCCCcEEEE
Q 012112          242 AQPKHVSVY  250 (471)
Q Consensus       242 l~p~his~y  250 (471)
                      .+.+++.+.
T Consensus       164 v~~~~vg~~  172 (278)
T d1i60a_         164 VNRDNVGLV  172 (278)
T ss_dssp             HCCTTEEEE
T ss_pred             hhccccccc
Confidence            776666655


No 141
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=33.21  E-value=23  Score=30.07  Aligned_cols=44  Identities=25%  Similarity=0.447  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          131 RFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       131 ~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      +.+.++.+.+.+. +  .  .+.+++. +.++.+.+..++++|++.+-+|
T Consensus       153 ~ki~~l~~~~~~~-~--~--~~~I~vD-GGIn~~~i~~l~~aGad~~V~G  196 (217)
T d2flia1         153 EKVATVAKWRDEK-G--L--SFDIEVD-GGVDNKTIRACYEAGANVFVAG  196 (217)
T ss_dssp             HHHHHHHHHHHHT-T--C--CCEEEEE-SSCCTTTHHHHHHHTCCEEEES
T ss_pred             HHHHHHHHHHHhc-C--C--CeEEEEe-CCCCHHHHHHHHHCCCCEEEEc
Confidence            4455554444442 1  2  2344454 4578999999999999999999


No 142
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=32.87  E-value=22  Score=30.25  Aligned_cols=44  Identities=16%  Similarity=0.372  Sum_probs=30.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          131 RFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       131 ~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      +.+.++.+.+.+. +    .++.++++ +.++.+.+..++++|++.+-.|
T Consensus       156 ~ki~~l~~~~~~~-~----~~~~I~VD-GGIn~~~i~~l~~~Gad~~V~G  199 (221)
T d1tqja_         156 PKIRALRQMCDER-G----LDPWIEVD-GGLKPNNTWQVLEAGANAIVAG  199 (221)
T ss_dssp             HHHHHHHHHHHHH-T----CCCEEEEE-SSCCTTTTHHHHHHTCCEEEES
T ss_pred             HHHHHHHhhhhcc-c----cceEEEEE-CCcCHHHHHHHHHcCCCEEEEC
Confidence            4455555555443 1    23445554 4689999999999999999999


No 143
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=32.68  E-value=65  Score=24.59  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=30.4

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEe
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICL  418 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~  418 (471)
                      ..++...++.+..|.+-. .....++.|++.|++...
T Consensus        39 ~~plt~~ela~~l~vsk~-~vs~~l~~L~~~GlV~r~   74 (151)
T d1ku9a_          39 DKPLTISDIMEELKISKG-NVSMSLKKLEELGFVRKV   74 (151)
T ss_dssp             SSCEEHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEE
T ss_pred             CCCcCHHHHHHHhCCCcc-hHHHHHHHHHHCCCEEEE
Confidence            456999999999999864 466789999999999865


No 144
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=32.51  E-value=67  Score=27.75  Aligned_cols=54  Identities=7%  Similarity=0.069  Sum_probs=28.6

Q ss_pred             CHHHHHHHHHHHHHcCCCeeEeee-ecCCCCCCHHHHHHHHHHHHhCCCCcEEEEec
Q 012112          197 GLKEVYEAIEIVKLCGVENWSLDL-ISSLPHQTPQMWEESLRRTVGAQPKHVSVYDL  252 (471)
Q Consensus       197 t~~~~~~ai~~~~~~G~~~v~~Dl-I~GlPgqT~e~~~~~l~~~~~l~p~his~y~l  252 (471)
                      +.+++.+..+.+.++|.+.+.+-- .|.  .-|.+++.+-.+.+.+.-.-.|-+|..
T Consensus        81 st~~ai~~a~~A~~~Gad~v~v~pP~y~--~~s~~~i~~~~~~ia~a~~~pi~iYn~  135 (295)
T d1o5ka_          81 STEKTLKLVKQAEKLGANGVLVVTPYYN--KPTQEGLYQHYKYISERTDLGIVVYNV  135 (295)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEEEECCCSS--CCCHHHHHHHHHHHHTTCSSCEEEEEC
T ss_pred             cHHHHHHHHHHHHHcCCCEEEEeCCCCC--CCCHHHHHHHHHHHHhccCCCeeEEec
Confidence            344555666666777776443311 111  125566666666666554444555554


No 145
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=31.15  E-value=45  Score=22.02  Aligned_cols=43  Identities=12%  Similarity=0.165  Sum_probs=34.8

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEE
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVI  416 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~  416 (471)
                      ..+..-|.....++..+++++.|.+.. .....+++|++.|.+.
T Consensus         8 ~~IL~~L~~~~r~s~~eiA~~l~ls~~-~v~~Ri~rL~~~GiI~   50 (63)
T d2cg4a1           8 RGILEALMGNARTAYAELAKQFGVSPE-TIHVRVEKMKQAGIIT   50 (63)
T ss_dssp             HHHHHHHHHCTTSCHHHHHHHHTSCHH-HHHHHHHHHHHHTSEE
T ss_pred             HHHHHHHHHcCCCCHHHHHHHHCcCHH-HHHHHHHHHHHCCCeE
Confidence            345556666777899999999999865 4678899999999986


No 146
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=30.67  E-value=1.5e+02  Score=25.17  Aligned_cols=96  Identities=9%  Similarity=0.139  Sum_probs=63.0

Q ss_pred             eeEEEEcCCC--CCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCC--CHHHHHHHHHCCCCEEEEccCCCCHHHHH
Q 012112          115 LETVFFGGGT--PSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTF--DARKMEELMDLGVNRVSLGVQAFQDELLK  190 (471)
Q Consensus       115 v~~i~fGGGT--ps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l--~~e~l~~l~~~GvnrvsiGvQS~~d~~L~  190 (471)
                      ++.++++|.|  ...|+.++-.++++.+.+..+  ....+-+-+...+.  .-+..+..+++|++-+.+..-.+      
T Consensus        36 v~Gi~v~GstGE~~~Ls~~Er~~~~~~~~~~~~--~~~~vi~gv~~~st~~ai~~a~~A~~~Gad~v~v~pP~y------  107 (295)
T d1o5ka_          36 VNALIVLGTTGESPTVNEDEREKLVSRTLEIVD--GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY------  107 (295)
T ss_dssp             CCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT--TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS------
T ss_pred             CCEEEECeeccchhhCCHHHHHHHhhhhccccc--cCCceEeecccccHHHHHHHHHHHHHcCCCEEEEeCCCC------
Confidence            7889998876  566798888888888776643  23445555433332  24677777888999888866543      


Q ss_pred             HcCCCCCHHHHHHHHHHHHHc-CCCeeEeeeecCCC
Q 012112          191 SCGRAHGLKEVYEAIEIVKLC-GVENWSLDLISSLP  225 (471)
Q Consensus       191 ~l~R~~t~~~~~~ai~~~~~~-G~~~v~~DlI~GlP  225 (471)
                        . ..+.+++.+-.+.+.++ ++. +   +||..|
T Consensus       108 --~-~~s~~~i~~~~~~ia~a~~~p-i---~iYn~P  136 (295)
T d1o5ka_         108 --N-KPTQEGLYQHYKYISERTDLG-I---VVYNVP  136 (295)
T ss_dssp             --S-CCCHHHHHHHHHHHHTTCSSC-E---EEEECH
T ss_pred             --C-CCCHHHHHHHHHHHHhccCCC-e---eEEecc
Confidence              2 24677777777777665 333 2   556666


No 147
>d2cbia2 c.1.8.10 (A:179-495) Hyaluronidase catalytic domain {Clostridium perfringens [TaxId: 1502]}
Probab=28.78  E-value=21  Score=32.40  Aligned_cols=82  Identities=7%  Similarity=-0.014  Sum_probs=53.5

Q ss_pred             HHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHH---HHHHHHHHHHHcCCCeeEeeeecCC-CCCC-----------
Q 012112          164 RKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLK---EVYEAIEIVKLCGVENWSLDLISSL-PHQT-----------  228 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~---~~~~ai~~~~~~G~~~v~~DlI~Gl-PgqT-----------  228 (471)
                      +.++.|.+.|.|.---+.-. |+-.+..-+..++.+   ++.+.++.+++.|+.     +++|+ ||.+           
T Consensus        22 ~l~~~l~~~~mn~YiYAPKd-D~~hR~~Wr~~Yp~~~l~~~~~l~~~a~~~~v~-----fv~~isPGl~~~~~~~~~~~d   95 (317)
T d2cbia2          22 DQIKFYGENKLNTYIYAPKD-DPYHREKWREPYPESEMQRMQELINASAENKVD-----FVFGISPGIDIRFDGDAGEED   95 (317)
T ss_dssp             HHHHHHHHTTCCEEEECCTT-CGGGTTTTTSCCCGGGHHHHHHHHHHHHHTTCE-----EEEEECGGGTCCCSHHHHHHH
T ss_pred             HHHHHHHHcCCcEEEEecCC-CHHHHHHhCccCCHHHHHHHHHHHHHHHHcCCe-----EEEEeCCCCcccccccccHHH
Confidence            66777788888887777755 555555556666544   455556666666654     66665 6543           


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEe
Q 012112          229 PQMWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       229 ~e~~~~~l~~~~~l~p~his~y~  251 (471)
                      .+.+.+-++.+.++|+.++++.-
T Consensus        96 ~~~L~~K~~ql~~~Gvr~faIlf  118 (317)
T d2cbia2          96 FNHLITKAESLYDMGVRSFAIYW  118 (317)
T ss_dssp             HHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEec
Confidence            12355666677888999887764


No 148
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=28.66  E-value=16  Score=31.16  Aligned_cols=43  Identities=19%  Similarity=0.380  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          131 RFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       131 ~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      .-++++ +.+++.+   ++.+  +++. +.++.+.+..++++|++.+-.|
T Consensus       156 ~~l~KI-~~lr~~~---~~~~--I~VD-GGIn~~~i~~l~~aGad~iV~G  198 (221)
T d1tqxa_         156 DMMGKV-SFLRKKY---KNLN--IQVD-GGLNIETTEISASHGANIIVAG  198 (221)
T ss_dssp             GGHHHH-HHHHHHC---TTCE--EEEE-SSCCHHHHHHHHHHTCCEEEES
T ss_pred             chhHHH-HHHHHhc---CCcc--eEEE-cccCHHhHHHHHHcCCCEEEEC
Confidence            344443 3345543   2334  4454 5689999999999999999998


No 149
>d1shux_ c.62.1.1 (X:) Capillary morphogenesis protein 2 domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.52  E-value=75  Score=24.94  Aligned_cols=68  Identities=18%  Similarity=0.185  Sum_probs=40.2

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEe-c--CCCCC----HHHHHHHHHCCCCEEEEccCCCCHHHHHHc
Q 012112          121 GGGTPSLVPPRFVSSILDTLTDKFGLSLDAEISMEM-D--PGTFD----ARKMEELMDLGVNRVSLGVQAFQDELLKSC  192 (471)
Q Consensus       121 GGGTps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~-~--P~~l~----~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l  192 (471)
                      +|||+   -...+....+.+...-+... ..+-+-+ +  +..-+    ....+.+++.|+.-+.+|+...++..|+.+
T Consensus        78 ~g~t~---~~~al~~~~~~~~~~~~~~~-~~~ivliTDG~~~~~~~~~~~~~~~~~k~~gv~v~~vgig~~~~~~L~~i  152 (181)
T d1shux_          78 VGETY---IHEGLKLANEQIQKAGGLKT-SSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERI  152 (181)
T ss_dssp             CSCCC---HHHHHHHHHHHHHHHTGGGS-CEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHH
T ss_pred             CCcch---HHHHHHHHHHHhhhcccCCC-ceEEEEecCCCCCCCccHHHHHHHHHHHHCCCEEEEEEeCccCHHHHHHH
Confidence            45664   23456666666654332211 2333333 2  22221    245567889999999999999998888876


No 150
>d1k77a_ c.1.15.5 (A:) Hypothetical protein YgbM (EC1530) {Escherichia coli [TaxId: 562]}
Probab=27.95  E-value=90  Score=25.49  Aligned_cols=108  Identities=12%  Similarity=0.070  Sum_probs=53.3

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC-----------CCCC---C
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS-----------LPHQ---T  228 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G-----------lPgq---T  228 (471)
                      +|.++..+++|++-|.+-.-           -..+.++   .-+.+++.|+..+++.....           .|+.   .
T Consensus        18 ~e~i~~a~~~Gf~gIEl~~~-----------~~~~~~~---~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (260)
T d1k77a_          18 IERFAAARKAGFDAVEFLFP-----------YNYSTLQ---IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEA   83 (260)
T ss_dssp             GGHHHHHHHHTCSEEECSCC-----------TTSCHHH---HHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHH
T ss_pred             HHHHHHHHHhCCCEEEECCC-----------CCCCHHH---HHHHHHHCCCcEEEEecccccccccccccccCHHHHHHH
Confidence            46778888888887765211           0122332   33556677776433332111           1111   2


Q ss_pred             HHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCc
Q 012112          229 PQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFYRMASSMLSSAGYR  294 (471)
Q Consensus       229 ~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~  294 (471)
                      .+.+...++.+..++..++.+..-....+.....          ..+...+.+..+.+...+.|..
T Consensus        84 ~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~a~~~gi~  139 (260)
T d1k77a_          84 HADIDLALEYALALNCEQVHVMAGVVPAGEDAER----------YRAVFIDNIRYAADRFAPHGKR  139 (260)
T ss_dssp             HHHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHH----------HHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHHHHhhCCCeeeecCCCCCCCccHHH----------HHHHHHHHHHHHhhHHHhcCce
Confidence            3444556666677777777655433222111111          1123345566666666666644


No 151
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.77  E-value=69  Score=28.36  Aligned_cols=104  Identities=13%  Similarity=0.206  Sum_probs=65.7

Q ss_pred             CCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHH----CCCCEEEEcc--CCCCHHHH-HHcCCC-----
Q 012112          128 VPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMD----LGVNRVSLGV--QAFQDELL-KSCGRA-----  195 (471)
Q Consensus       128 l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~----~GvnrvsiGv--QS~~d~~L-~~l~R~-----  195 (471)
                      ++++++.++...+-+.|++     ++||   +.++++..+.+.+    .|+ .| +|=  -..+.+.+ +.+.+.     
T Consensus       132 ~s~~elid~y~~li~~YPI-----isIE---Dp~~e~D~~gw~~lt~~~g~-~i-VGDDl~~Tn~~rl~~~i~~~~~nai  201 (295)
T d2al1a1         132 LTGPQLADLYHSLMKRYPI-----VSIE---DPFAEDDWEAWSHFFKTAGI-QI-VADDLTVTNPKRIATAIEKKAADAL  201 (295)
T ss_dssp             BCHHHHHHHHHHHHHHSCE-----EEEE---CCSCTTCHHHHHHHHTTCCS-EE-EESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred             cchHHHHHHHHHHHHhCCE-----EEec---CCcCccchHHHHHHhhccCc-ee-ecchhhcccchhhhcchhhhcccce
Confidence            6778887777777677764     6787   4565544444433    353 33 562  22244443 444332     


Q ss_pred             -------CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcE
Q 012112          196 -------HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHV  247 (471)
Q Consensus       196 -------~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~hi  247 (471)
                             .|..+..++++.++++|+..    +|-.=-|||.+++..+|...  ++...|
T Consensus       202 liK~NQiGTvtEt~ea~~la~~~g~~~----ivShRSGETeD~~iaDLAVg--~~a~~i  254 (295)
T d2al1a1         202 LLKVNQIGTLSESIKAAQDSFAAGWGV----MVSHRSGETEDTFIADLVVG--LRTGQI  254 (295)
T ss_dssp             EECHHHHCCHHHHHHHHHHHHHTTCEE----EEECCSBCCSCCHHHHHHHH--TTCSEE
T ss_pred             eecccchhhHHHHHHHHHHHHhcCCee----ecccCCCCcCcchhhhhhHh--cCCCee
Confidence                   37899999999999999862    34445789999999887554  444433


No 152
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=27.77  E-value=76  Score=20.82  Aligned_cols=42  Identities=7%  Similarity=0.179  Sum_probs=33.8

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEE
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVI  416 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~  416 (471)
                      .++..|..+..+...++++..|.+.. .....+++|.+.|.+.
T Consensus         9 ~IL~~L~~n~r~s~~~iA~~lgis~~-tv~~Ri~~L~~~giI~   50 (63)
T d2cfxa1           9 NIIEELKKDSRLSMRELGRKIKLSPP-SVTERVRQLESFGIIK   50 (63)
T ss_dssp             HHHHHHHHCSCCCHHHHHHHHTCCHH-HHHHHHHHHHHTTSEE
T ss_pred             HHHHHHHHcCCCCHHHHHHHHCcCHH-HHHHHHHHHHHCCCee
Confidence            45555566666899999999999974 5678899999999986


No 153
>d2ghfa2 g.37.1.1 (A:9-44) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.73  E-value=8.7  Score=22.55  Aligned_cols=10  Identities=40%  Similarity=1.195  Sum_probs=8.0

Q ss_pred             cCCcCCCCCc
Q 012112           65 KRCHYCDFPI   74 (471)
Q Consensus        65 ~~C~yC~f~~   74 (471)
                      +-|.||.|..
T Consensus        11 yECKYC~f~T   20 (36)
T d2ghfa2          11 YECKYCTFQT   20 (36)
T ss_dssp             EECSSCSCEE
T ss_pred             eeeeecCccc
Confidence            4699999964


No 154
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=27.64  E-value=38  Score=28.97  Aligned_cols=29  Identities=21%  Similarity=0.422  Sum_probs=24.2

Q ss_pred             EEEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          151 EISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       151 eitiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      ++.|+++ +.++.+.+..+.++|++.+-.|
T Consensus       179 ~~~I~vD-GGIn~~~i~~l~~~Gad~~V~G  207 (230)
T d1rpxa_         179 NPWIEVD-GGVGPKNAYKVIEAGANALVAG  207 (230)
T ss_dssp             CCEEEEE-SSCCTTTHHHHHHHTCCEEEES
T ss_pred             ceEEEEE-CCcCHHHHHHHHHcCCCEEEEC
Confidence            3555665 4689999999999999999999


No 155
>d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]}
Probab=27.49  E-value=64  Score=27.13  Aligned_cols=90  Identities=14%  Similarity=0.151  Sum_probs=0.0

Q ss_pred             CHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHH
Q 012112          129 PPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIV  208 (471)
Q Consensus       129 ~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~  208 (471)
                      +-+.+.+..+.+++.|+ ....-+++-+||   +...++.+++.|     +|++..+...++                .+
T Consensus         1 dl~~i~~~~~~~~~~~p-~v~~~YA~KaN~---~~~il~~l~~~g-----~g~dv~S~~El~----------------~a   55 (240)
T d1f3ta2           1 DLGDIVRKHETWKKCLP-RVTPFYAVKCND---DWRVLGTLAALG-----TGFDCASNTEIQ----------------RV   55 (240)
T ss_dssp             EHHHHHHHHHHHHHHCT-TEEEEEEGGGCC---CHHHHHHHHHTT-----CEEEECSHHHHH----------------HH
T ss_pred             CHHHHHHHHHHHHHHCC-CCEEEEEeccCC---CHHHHHHHHHcC-----CCeEeccchhHH----------------HH


Q ss_pred             HHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEE
Q 012112          209 KLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       209 ~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~  249 (471)
                      +++|++  .-++||.-|+-|.+    .++.+++.++..+++
T Consensus        56 l~~G~~--~~~Iif~g~~k~~~----ei~~a~~~g~~~~~~   90 (240)
T d1f3ta2          56 RGIGVP--PEKIIYANPCKQIS----HIRYARDSGVDVMTF   90 (240)
T ss_dssp             HHTTCC--GGGEEECCSSCCHH----HHHHHHHTTCCEEEE
T ss_pred             HHcCCC--ccceeeccccchhH----HHHHHHHhcccceee


No 156
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=27.14  E-value=1.6e+02  Score=25.08  Aligned_cols=51  Identities=16%  Similarity=0.033  Sum_probs=26.9

Q ss_pred             CHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEE
Q 012112          197 GLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSV  249 (471)
Q Consensus       197 t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~  249 (471)
                      |.++..+.++.+.++--.  .+-+|.|..+.+.++..+-.+.+.+++.+.|.+
T Consensus        55 s~~Er~~l~~~~~~~~~~--~~~vi~gv~~~s~~~~iela~~a~~~Gad~i~~  105 (293)
T d1f74a_          55 STEEKKEIFRIAKDEAKD--QIALIAQVGSVNLKEAVELGKYATELGYDCLSA  105 (293)
T ss_dssp             CHHHHHHHHHHHHHHHTT--SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred             CHHHHhhhhheeeccccC--ccccccccccccHHHHHHHHHHHHHcCCCEeec
Confidence            445555555544433111  134566666666666666666666666665433


No 157
>d1tz9a_ c.1.15.6 (A:) Mannonate dehydratase UxuA {Enterococcus faecalis (Streptococcus faecalis) [TaxId: 1351]}
Probab=26.91  E-value=79  Score=28.69  Aligned_cols=84  Identities=11%  Similarity=0.034  Sum_probs=59.1

Q ss_pred             HHHHHHc-CCCeeEeeeecCCCCC--CHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCCCCCCHHHHHHHH
Q 012112          205 IEIVKLC-GVENWSLDLISSLPHQ--TPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEFPLPTETQSANFY  281 (471)
Q Consensus       205 i~~~~~~-G~~~v~~DlI~GlPgq--T~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~~~p~~~~~~~~~  281 (471)
                      ++.+|+. |.+.|-.-|----||+  |.+++.+.-+.+.+.+..-      .+.+..|.+..++.   ..|+-++..+-|
T Consensus        17 L~~i~Q~~G~~~iv~~l~~~~~G~~W~~~~i~~~k~~ie~~GL~~------~vvEs~pv~e~Ik~---g~~~~~~~Ien~   87 (353)
T d1tz9a_          17 LKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLAL------LGIESVAIHDAIKA---GTDQRDHYIDNY   87 (353)
T ss_dssp             HHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEE------EEECSCCCCHHHHH---TCSTHHHHHHHH
T ss_pred             HHHHhhhcCCcchhhcCCCCCCCCcCCHHHHHHHHHHHHHcCCEE------EEecCCCChHHhhc---CCCcHHHHHHHH
Confidence            3456774 8887764444444565  7999999999999988542      22334455544433   347889999999


Q ss_pred             HHHHHHHHHCCCceec
Q 012112          282 RMASSMLSSAGYRHYE  297 (471)
Q Consensus       282 ~~~~~~L~~~Gy~~ye  297 (471)
                      ....+-|.++|.....
T Consensus        88 ~~slrnla~aGI~~ic  103 (353)
T d1tz9a_          88 RQTLRNLGKCGISLVC  103 (353)
T ss_dssp             HHHHHHHHHTTCCEEE
T ss_pred             HHHHHHHHHcCCCEEE
Confidence            9999999999998653


No 158
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.83  E-value=1.3e+02  Score=23.97  Aligned_cols=93  Identities=11%  Similarity=0.110  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCC
Q 012112          134 SSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGV  213 (471)
Q Consensus       134 ~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~  213 (471)
                      ++.+..+++..+  ....|.+|+.    +.+.+....++|+++|-+-              ..+.+++.++++.++..+-
T Consensus        65 ~~~~~~~~~~~~--~~~~I~VEv~----~~~e~~~a~~~g~d~i~LD--------------n~~pe~~k~~~~~lk~~~~  124 (170)
T d1o4ua1          65 ERAVQEVRKIIP--FTTKIEVEVE----NLEDALRAVEAGADIVMLD--------------NLSPEEVKDISRRIKDINP  124 (170)
T ss_dssp             HHHHHHHHTTSC--TTSCEEEEES----SHHHHHHHHHTTCSEEEEE--------------SCCHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhhCC--CCceEEEEeC----cHHHHHHHHhcCccEEEEc--------------CcChhhHhHHHHHHHhhCC
Confidence            445555655443  2356788864    4566777788999987752              4466777778888877754


Q ss_pred             CeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEeccc
Q 012112          214 ENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYDLQV  254 (471)
Q Consensus       214 ~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~l~~  254 (471)
                      . +.+-.==|+--++.+       ...+.++|.||+-.++.
T Consensus       125 ~-i~lEaSGGI~~~ni~-------~~a~~GVD~Is~g~lt~  157 (170)
T d1o4ua1         125 N-VIVEVSGGITEENVS-------LYDFETVDVISSSRLTL  157 (170)
T ss_dssp             T-SEEEEEECCCTTTGG-------GGCCTTCCEEEEGGGTS
T ss_pred             c-EEEEEECCCCHHHHH-------HHHHcCCCEEEcCcccc
Confidence            3 433332244444333       34567999999887764


No 159
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=26.78  E-value=23  Score=27.72  Aligned_cols=73  Identities=11%  Similarity=0.062  Sum_probs=40.9

Q ss_pred             CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCC-CHHHHHHHHHHHH
Q 012112          162 DARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQ-TPQMWEESLRRTV  240 (471)
Q Consensus       162 ~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgq-T~e~~~~~l~~~~  240 (471)
                      .++.++..++.+.+-|-+.+-..           ++...+.+.++.+++.|..+  +-+|+|=.-. ..+++.+....+.
T Consensus        43 ~e~iv~a~~~~~~d~v~lS~~~~-----------~~~~~~~~~~~~l~~~~~~~--i~iivGG~~~~~~~~~~~~~~~l~  109 (137)
T d1ccwa_          43 QELFIKAAIETKADAILVSSLYG-----------QGEIDCKGLRQKCDEAGLEG--ILLYVGGNIVVGKQHWPDVEKRFK  109 (137)
T ss_dssp             HHHHHHHHHHHTCSEEEEEECSS-----------THHHHHTTHHHHHHHTTCTT--CEEEEEESCSSSSCCHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCEEEEeeccc-----------cchHHHHHHHHHHHHhccCC--CEEEEeCCcCCCccccHHHHHHHH
Confidence            35666666666666665554443           33555667778888887754  3355553211 1222333344557


Q ss_pred             hCCCCcE
Q 012112          241 GAQPKHV  247 (471)
Q Consensus       241 ~l~p~hi  247 (471)
                      +++++.|
T Consensus       110 ~~Gv~~i  116 (137)
T d1ccwa_         110 DMGYDRV  116 (137)
T ss_dssp             HTTCSEE
T ss_pred             HcCCCEE
Confidence            7887755


No 160
>d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.62  E-value=47  Score=29.05  Aligned_cols=73  Identities=18%  Similarity=0.163  Sum_probs=44.6

Q ss_pred             CcEEEEEecCCCCCHHHHHHHHHCCCCEE--EEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          149 DAEISMEMDPGTFDARKMEELMDLGVNRV--SLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       149 ~~eitiE~~P~~l~~e~l~~l~~~Gvnrv--siGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                      +..|++-.+-+.=|.-+++.|+++|..-.  +-.+-|.+|++                +..+.+.|+.      +|+.-|
T Consensus        45 G~rI~~clHlt~kTA~L~~tL~~~GA~V~~~~~Np~STQDdv----------------aAaL~~~Gi~------VfA~~g  102 (267)
T d1li4a2          45 GARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQDHA----------------AAAIAKAGIP------VYAWKG  102 (267)
T ss_dssp             TCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCCCHHH----------------HHHHHHTTCC------EEECTT
T ss_pred             CCEEEEEEeehHHHHHHHHHHHHccCcEEEeccCcccccccc----------------eeeeccCCce------EEEecC
Confidence            45666666655446677888888886422  22344444433                2223456775      345668


Q ss_pred             CCHHHHHHHHHHHHhCC
Q 012112          227 QTPQMWEESLRRTVGAQ  243 (471)
Q Consensus       227 qT~e~~~~~l~~~~~l~  243 (471)
                      +|.+++...++.+++..
T Consensus       103 ~~~eey~~~~~~~L~~~  119 (267)
T d1li4a2         103 ETDEEYLWCIEQTLYFK  119 (267)
T ss_dssp             CCHHHHHHHHHTTTEET
T ss_pred             CCHHHHHHHHHHHHhcc
Confidence            88888888888877544


No 161
>d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=26.61  E-value=60  Score=28.82  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=70.0

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHH----HHCCCCEEEEc--cCCCCHHHHHH-c------
Q 012112          126 SLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEEL----MDLGVNRVSLG--VQAFQDELLKS-C------  192 (471)
Q Consensus       126 s~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l----~~~GvnrvsiG--vQS~~d~~L~~-l------  192 (471)
                      ++++++++.++...+-+.|++     ++||   +.++++..+.|    ++.|=+-.-+|  +=..+.+.+++ +      
T Consensus       130 ~~~s~~elid~y~~l~~~YPI-----isIE---DP~~e~D~~gw~~lt~~lg~~~~iVGDDL~vTn~~~l~~gI~~~~~n  201 (296)
T d1w6ta1         130 AVRTSAEQIDYLEELVNKYPI-----ITIE---DGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAAN  201 (296)
T ss_dssp             CEECHHHHHHHHHHHHHHSCE-----EEEE---SCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCS
T ss_pred             cccCHHHHHHHHHHHHhcCCe-----EEEe---cCcccccHHHHHHHHHHhCCceEEEcCcccccChhHHHhhhhhcccc
Confidence            446787887777777777764     6888   55655444433    33454444555  33446666654 2      


Q ss_pred             ------CCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcE
Q 012112          193 ------GRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHV  247 (471)
Q Consensus       193 ------~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~hi  247 (471)
                            +-..|..+..++++.++++|+..    +|-.=-|||.+++..+|..  .++...|
T Consensus       202 ailiK~NQiGTvtet~e~~~~a~~~g~~~----ivShRSGETeD~~iadLAV--g~~a~~i  256 (296)
T d1w6ta1         202 SILIKVNQIGTLTETFEAIEMAKEAGYTA----VVSHRSGETEDSTIADIAV--ATNAGQI  256 (296)
T ss_dssp             EEEECHHHHCSHHHHHHHHHHHHHTTCEE----EEECCSSCCSCCHHHHHHH--HTTCCEE
T ss_pred             cceeccchhHHHHHHHHHHHHHHHCCceE----EeecCCCCCccchhHHHHH--HcCCCee
Confidence                  22347899999999999999862    3445579999999987754  4444444


No 162
>d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]}
Probab=26.56  E-value=10  Score=34.67  Aligned_cols=38  Identities=13%  Similarity=0.176  Sum_probs=30.6

Q ss_pred             CCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHH
Q 012112          196 HGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEE  234 (471)
Q Consensus       196 ~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~  234 (471)
                      .+.+++.+.|+.+++.|+. |-+|++++.-+.+-..+..
T Consensus        79 G~~~dlk~lv~~~H~~Gi~-VilD~V~NH~~~~~~~~~~  116 (409)
T d1wzaa2          79 GTLEDFHKLVEAAHQRGIK-VIIDLPINHTSERHPWFLK  116 (409)
T ss_dssp             CCHHHHHHHHHHHHHTTCE-EEEECCCSBCCTTSHHHHH
T ss_pred             CCHHHHHHHHHHHHhcCCE-EEEecccccccccCcchhh
Confidence            3789999999999999997 9999999876555444433


No 163
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=26.22  E-value=1.1e+02  Score=26.93  Aligned_cols=101  Identities=12%  Similarity=0.274  Sum_probs=65.5

Q ss_pred             CCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHH----HHCCCCEEEEc---cCCCCHHHH-HHcCC----
Q 012112          127 LVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEEL----MDLGVNRVSLG---VQAFQDELL-KSCGR----  194 (471)
Q Consensus       127 ~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l----~~~GvnrvsiG---vQS~~d~~L-~~l~R----  194 (471)
                      .++++++.++...+-+.|++     ++||   +.++++..+.+    ++.|+ .| +|   .-| +.+.+ +.+.+    
T Consensus       130 ~~t~delid~y~~l~~kYPI-----isIE---DP~~E~D~~gw~~lt~~lg~-~i-vGDDl~vT-n~~rl~kgi~~~aan  198 (294)
T d2akza1         130 YITGDQLGALYQDFVRDYPV-----VSIE---DPFDQDDWAAWSKFTANVGI-QI-VGDDLTVT-NPKRIERAVEEKACN  198 (294)
T ss_dssp             CBCHHHHHHHHHHHHHHSCE-----EEEE---CCSCTTCHHHHHHHHHTCSS-EE-EESTTTTT-CHHHHHHHHHTTCCS
T ss_pred             eecHHHHHHHHHHHhcccCe-----EEEe---CCCcccchhhHHHHHHhcCc-EE-Eccccccc-cHHHHHHHHhcCcCc
Confidence            46888888887766667763     7888   44644433333    33563 33 45   233 33333 33322    


Q ss_pred             --------CCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhC
Q 012112          195 --------AHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGA  242 (471)
Q Consensus       195 --------~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l  242 (471)
                              ..|..+..++++.++++|+..    +|-.=-|||.+++..+|......
T Consensus       199 ailIK~NQiGTltEt~ea~~la~~~g~~~----ivShRsGETeD~~iaDLAVg~~a  250 (294)
T d2akza1         199 CLLLKVNQIGSVTEAIQACKLAQENGWGV----MVSHRSGETEDTFIADLVVGLCT  250 (294)
T ss_dssp             EEEECHHHHCCHHHHHHHHHHHHHTTCEE----EEECCSBCCSCCHHHHHHHHHTC
T ss_pred             cceeccccchhHHHHHHHHHHHHHcCCcE----EeeCCCCCcCcchHhHHHHhcCC
Confidence                    237889999999999999863    44556799999999888766443


No 164
>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl phosphate synthase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.82  E-value=56  Score=27.49  Aligned_cols=48  Identities=19%  Similarity=0.260  Sum_probs=37.5

Q ss_pred             ecCCC-CCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCC
Q 012112          156 MDPGT-FDARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVE  214 (471)
Q Consensus       156 ~~P~~-l~~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~  214 (471)
                      ++|+. .+.+.++.|.++|++-|-||   |+|        +.+...+.+.++.+++.+..
T Consensus        12 ~DPd~~~t~~~i~~l~~~GaD~IElG---fSd--------pi~~g~~~~~i~~~~~~~lp   60 (231)
T d2f6ua1          12 LDPDRTNTDEIIKAVADSGTDAVMIS---GTQ--------NVTYEKARTLIEKVSQYGLP   60 (231)
T ss_dssp             ECTTSCCCHHHHHHHHTTTCSEEEEC---CCT--------TCCHHHHHHHHHHHTTSCCC
T ss_pred             ECCCCccHHHHHHHHHHcCCCEEEEc---CCC--------ccccccHHHHHHHHHhCCCC
Confidence            46763 58899999999999999999   877        34566667777777776665


No 165
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=25.44  E-value=75  Score=20.90  Aligned_cols=40  Identities=10%  Similarity=0.085  Sum_probs=29.4

Q ss_pred             HHHHhccccC-CCCHhhHHHHhCCChHHHHHHHHHHHHHCCC
Q 012112          374 VLMLSFRTAR-GVDLKSFGETFGCSLVHTLCKAYKPYIESGH  414 (471)
Q Consensus       374 ~~~~~Lr~~~-gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gl  414 (471)
                      .++.-|+... .|..+++++.||++-. .+..-++.|.+.|+
T Consensus        11 ~Il~~L~~~~~~vs~~~La~~l~VS~~-TI~rdi~~L~~~G~   51 (65)
T d1j5ya1          11 SIVRILERSKEPVSGAQLAEELSVSRQ-VIVQDIAYLRSLGY   51 (65)
T ss_dssp             HHHHHHHHCSSCBCHHHHHHHHTSCHH-HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHcCCCCcHHHHHHHHCCCHH-HHHHHHHHHHHCCC
Confidence            3444454444 4999999999999965 35566788888897


No 166
>d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]}
Probab=25.42  E-value=80  Score=27.84  Aligned_cols=105  Identities=13%  Similarity=0.207  Sum_probs=69.7

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHH----HHCCCCEEEEc--cCCCCHHHHHH-cCC----
Q 012112          126 SLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEEL----MDLGVNRVSLG--VQAFQDELLKS-CGR----  194 (471)
Q Consensus       126 s~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l----~~~GvnrvsiG--vQS~~d~~L~~-l~R----  194 (471)
                      ..++++++.++...+-+.|++     ++||   +.++++..+.+    ++.|-+-.-+|  +-..+.+.++. +.+    
T Consensus       129 ~~ls~~elid~y~~l~~~YPI-----isIE---Dp~~e~D~~gw~~lt~~~g~k~~iVGDDL~vTn~~rl~~gi~~~a~N  200 (291)
T d2ptza1         129 TWVTAEQLRETYCKWAHDYPI-----VSIE---DPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACN  200 (291)
T ss_dssp             CEECHHHHHHHHHHHHHHSCE-----EEEE---CCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCS
T ss_pred             chhhHHHHHHHHHHHhhccce-----eEec---CCccccchhHHHHhhhccCceEEEecCcccccchHHHhhccccCCcc
Confidence            457888888887777777764     7888   55655444433    33464445555  33345555543 322    


Q ss_pred             --------CCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhC
Q 012112          195 --------AHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGA  242 (471)
Q Consensus       195 --------~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l  242 (471)
                              .-|..+..++++.++++|+..    +|-.=-|||.+++..+|......
T Consensus       201 aiLIK~NQiGTvtEt~ea~~la~~~g~~~----iiShRSGETeD~~iaDLAVg~~a  252 (291)
T d2ptza1         201 SLLLKINQIGTISEAIASSKLCMENGWSV----MVSHRSGETEDTYIADLVVALGS  252 (291)
T ss_dssp             EEEECHHHHCCHHHHHHHHHHHHHTTCEE----EEECCSBCCSCCHHHHHHHHHTC
T ss_pred             ceEecchhhhhHHHHHHHHHHHHHcCeeE----EeeCCCCCcCcchHHHHHHHhCC
Confidence                    236899999999999999862    33344799999999888766554


No 167
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.41  E-value=90  Score=21.18  Aligned_cols=33  Identities=15%  Similarity=0.228  Sum_probs=24.9

Q ss_pred             CHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEec
Q 012112          386 DLKSFGETFGCSLVHTLCKAYKPYIESGHVICLD  419 (471)
Q Consensus       386 ~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~  419 (471)
                      +..++.++||.+.. ...+.++.|.+.|+|....
T Consensus        29 s~~eLa~~~~vSr~-tvr~Al~~L~~~G~i~~~~   61 (74)
T d1hw1a1          29 AERELSELIGVTRT-TLREVLQRLARDGWLTIQH   61 (74)
T ss_dssp             CHHHHHHHHTCCHH-HHHHHHHHHHHTTSEEEET
T ss_pred             cHHHHHHHHCCCHH-HHHHHHHHHHHCCcEEEEe
Confidence            45566777777754 4678899999999998654


No 168
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.34  E-value=11  Score=20.39  Aligned_cols=9  Identities=22%  Similarity=0.796  Sum_probs=7.1

Q ss_pred             CcCCcCCCC
Q 012112           64 RKRCHYCDF   72 (471)
Q Consensus        64 ~~~C~yC~f   72 (471)
                      |++|.+|+-
T Consensus         1 phkc~~c~k    9 (26)
T d2dmda2           1 PHKCEVCGK    9 (26)
T ss_dssp             CCCBTTTTB
T ss_pred             CCccchhhh
Confidence            578999974


No 169
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]}
Probab=25.34  E-value=48  Score=28.36  Aligned_cols=59  Identities=7%  Similarity=0.064  Sum_probs=37.7

Q ss_pred             HHHHHHHHHCCCCEEEEccCC--CC-----HHHH-HHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecC
Q 012112          163 ARKMEELMDLGVNRVSLGVQA--FQ-----DELL-KSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISS  223 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS--~~-----d~~L-~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~G  223 (471)
                      ++.++.|++.|+|-|-+.+-.  ..     .... ..++ ....+.+.+.++.|.+.|+. |-+|+..+
T Consensus        45 ~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~a~~~gi~-vi~d~~~~  111 (350)
T d2c0ha1          45 ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGID-NTLISDMRAYLHAAQRHNIL-IFFTLWNG  111 (350)
T ss_dssp             HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECC-TTHHHHHHHHHHHHHHTTCE-EEEEEEEC
T ss_pred             HHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccC-hhhhHHHHHHHHHHHHCCCE-EEEEeccc
Confidence            567899999999977664321  10     0000 0011 12256788899999999997 88888765


No 170
>d1xmaa_ a.4.5.61 (A:) Predicted transcriptional regulator {Clostridium thermocellum [TaxId: 1515]}
Probab=25.21  E-value=51  Score=24.06  Aligned_cols=47  Identities=19%  Similarity=0.304  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccc-cceeeecCchhhchHHHHHHHH
Q 012112          401 TLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNR-LAYFRLSDPEGFLLSNELISHA  465 (471)
Q Consensus       401 ~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~lt~~~G~~~~n~i~~~~  465 (471)
                      .+-+.|.+|+++|||.......                 .+.| .-+.++| ++|.........++
T Consensus        44 slY~~L~rLe~~GlI~~~~~~~-----------------~~g~~rk~Y~iT-~~G~~~l~~~~~~~   91 (103)
T d1xmaa_          44 TLYSAFARLEKNGYIKSYYGEE-----------------TQGKRRTYYRIT-PEGIKYYKQKCEEW   91 (103)
T ss_dssp             HHHHHHHHHHHTTSEEEEEEEE-----------------C--CEEEEEEEC-HHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHCCCeEEEeecc-----------------CCCCCceEEEEC-HHHHHHHHHHHHHH
Confidence            4567899999999997431100                 0111 1257997 99998877665554


No 171
>d2fi0a1 a.248.1.1 (A:3-81) Hypothetical protein SPr0485/SP0561 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=25.19  E-value=4.1  Score=29.41  Aligned_cols=49  Identities=20%  Similarity=0.317  Sum_probs=35.6

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHH--------HHHHHHHHcCCCeeE
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVY--------EAIEIVKLCGVENWS  217 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~--------~ai~~~~~~G~~~v~  217 (471)
                      +|.++.|.+.|+..+.      +|.+|+.+||--|.++..        ..++.++++||.-++
T Consensus        21 Pe~~~il~~~GF~~l~------nP~ml~t~gr~~TL~~aa~~~gidl~~~~~~L~~aG~~v~g   77 (79)
T d2fi0a1          21 PEVLEILVELGFKPLA------NPLMRNTVGRKVSLKQGSKLAGTPMDKIVRTLEANGYEVIG   77 (79)
T ss_dssp             GGGHHHHTTTTCGGGG------SHHHHTTHHHHCBHHHHHHHHTCCHHHHHHHHHHTTCEEEC
T ss_pred             hHHHHHHHHcCchhhC------CHHHHHHHhhHccHHHHHHHcCCCHHHHHHHHHHCCCeeeC
Confidence            4677788888876543      788999999988876554        446677888887443


No 172
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.16  E-value=30  Score=32.33  Aligned_cols=102  Identities=14%  Similarity=0.183  Sum_probs=63.0

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCH---HHHHHHHHHHHHcCCCeeEeee-ecCCCC-----------C
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGL---KEVYEAIEIVKLCGVENWSLDL-ISSLPH-----------Q  227 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~---~~~~~ai~~~~~~G~~~v~~Dl-I~GlPg-----------q  227 (471)
                      +|.++.|+++|+|...++|.=  .+++-. +-..+.   +-..+.++.+++.||+ .-+.| =+.+|.           +
T Consensus        53 ~eDi~ll~~lG~~~yRfSisW--sRI~P~-~g~~n~~gl~~Y~~~i~~l~~~gI~-P~VTL~H~d~P~~l~~~gGw~~~~  128 (423)
T d1vffa1          53 RDDIQLMTSLGYNAYRFSIEW--SRLFPE-ENKFNEDAFMKYREIIDLLLTRGIT-PLVTLHHFTSPLWFMKKGGFLREE  128 (423)
T ss_dssp             HHHHHHHHHHTCCEEEEECCH--HHHCSB-TTBCCHHHHHHHHHHHHHHHHTTCE-EEEEEESSCCBHHHHHTTGGGSGG
T ss_pred             HHHHHHHHHhCCCEEEecCcH--HHeecC-CCccChHHHHHHHHHHHHHHhcCCe-eEEeecCCcchHHHHhhhhccCHH
Confidence            488999999999966665431  111111 112333   3458889999999997 44444 345552           4


Q ss_pred             CHHHHHHHHHHHHhCCCCcEEEEeccccCCChhhhcccCCCC
Q 012112          228 TPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFGILYTPGEF  269 (471)
Q Consensus       228 T~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~~~~~~g~~  269 (471)
                      +.+.+.+=.+.+.++. ++|..+.-.-||.+....-+..|..
T Consensus       129 ~v~~F~~Ya~~~~~~~-d~Vk~W~T~NEP~~~~~~gy~~G~~  169 (423)
T d1vffa1         129 NLKHWEKYIEKVAELL-EKVKLVATFNEPMVYVMMGYLTAYW  169 (423)
T ss_dssp             GHHHHHHHHHHHHHHT-TTCCEEEEEECHHHHHHHHHTSCSS
T ss_pred             HHHHHHHHHHHHHHhh-cccceeeccCCcceeeeeccccccc
Confidence            6677777777777776 7787776555665544444444544


No 173
>d2choa2 c.1.8.10 (A:127-436) Glucosaminidase GH84, catalytic domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=25.16  E-value=47  Score=29.70  Aligned_cols=81  Identities=14%  Similarity=0.139  Sum_probs=45.6

Q ss_pred             HHHHHHHHCCCCEEEEccCCCCHHHHH--HcCCCCCHHH---HHHHHHHHHHcCCCeeEeeeecCC-CCCC-------HH
Q 012112          164 RKMEELMDLGVNRVSLGVQAFQDELLK--SCGRAHGLKE---VYEAIEIVKLCGVENWSLDLISSL-PHQT-------PQ  230 (471)
Q Consensus       164 e~l~~l~~~GvnrvsiGvQS~~d~~L~--~l~R~~t~~~---~~~ai~~~~~~G~~~v~~DlI~Gl-PgqT-------~e  230 (471)
                      +.++.|.+.|.|.---+.=.  |.-++  .=+..++.++   +.+.++.+++.|+     ++++|+ ||..       .+
T Consensus        22 ~l~~~l~~~~mn~Y~YaPKd--D~~hR~~~Wr~~yp~~~~~~~~~l~~~a~~~~i-----~f~~~isPGld~~~~~~d~~   94 (310)
T d2choa2          22 SQLKFYGKNKMNTYIYGPKD--DPYHSAPNWRLPYPDKEAAQLQELVAVANENEV-----DFVWAIHPGQDIKWNKEDRD   94 (310)
T ss_dssp             HHHHHHHHTTCCEEEECCTT--CTTTSTTGGGSCCCHHHHHHHHHHHHHHHHTTC-----EEEEEECCTTTCCSSHHHHH
T ss_pred             HHHHHHHHcCCcEEEEccCC--ChhhChhhhcccCCHHHHHHHHHHHHHHHHcCC-----eEEEEeCCCccccCCHHHHH
Confidence            55566666666655444321  11122  2344566444   4445556666655     466665 6653       34


Q ss_pred             HHHHHHHHHHhCCCCcEEEEe
Q 012112          231 MWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       231 ~~~~~l~~~~~l~p~his~y~  251 (471)
                      .+.+-++.+.++|+.++++.-
T Consensus        95 ~L~~K~~ql~~~Gv~~failf  115 (310)
T d2choa2          95 LLLAKFEKMYQLGVRSFAVFF  115 (310)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEC
T ss_pred             HHHHHHHHHHHcCCCEEEEee
Confidence            455666777889999887653


No 174
>d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}
Probab=25.08  E-value=54  Score=29.35  Aligned_cols=85  Identities=16%  Similarity=0.135  Sum_probs=53.8

Q ss_pred             HHHHHHHcCCC---CCcEEEEEecCCCCCHHHHHHHHHCCCCE--EEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHc
Q 012112          137 LDTLTDKFGLS---LDAEISMEMDPGTFDARKMEELMDLGVNR--VSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLC  211 (471)
Q Consensus       137 l~~l~~~~~l~---~~~eitiE~~P~~l~~e~l~~l~~~Gvnr--vsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~  211 (471)
                      +..|++.|.-+   .++.|+.-.+-..=|.-+++.|+++|..=  -|-.+=|.+|++-.++.+               ..
T Consensus        28 L~alr~~~~~~kPlkG~rIagcLHmt~qTAvLietL~~~GAeV~~~scNp~STQD~vAAAl~~---------------~~   92 (313)
T d1v8ba2          28 LMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTADYAAAAVST---------------LE   92 (313)
T ss_dssp             HHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCCHHHHHHHTT---------------ST
T ss_pred             HHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHhCCeeEEeccCCcccchHHHHHhhc---------------cC
Confidence            45566655321   24567766665444677888888888542  244566666655444422               23


Q ss_pred             CCCeeEeeeecCCCCCCHHHHHHHHHHHHhC
Q 012112          212 GVENWSLDLISSLPHQTPQMWEESLRRTVGA  242 (471)
Q Consensus       212 G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l  242 (471)
                      |+.      +|+.-|+|.+++...++.++..
T Consensus        93 gi~------VfAwkGet~eey~~~i~~~L~~  117 (313)
T d1v8ba2          93 NVT------VFAWKNETLEEYWWCVESALTW  117 (313)
T ss_dssp             TEE------EECCTTCCHHHHHHHHHHHHCC
T ss_pred             Cce------EEEecCCCHHHHHHHHHHHHhc
Confidence            543      5677889999999988888865


No 175
>d2p6ra1 a.4.5.43 (A:404-488) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=24.86  E-value=49  Score=23.29  Aligned_cols=23  Identities=22%  Similarity=0.145  Sum_probs=18.4

Q ss_pred             CCChHHHHHHHHHHHHHCCCEEE
Q 012112          395 GCSLVHTLCKAYKPYIESGHVIC  417 (471)
Q Consensus       395 g~~~~~~~~~~~~~~~~~gll~~  417 (471)
                      ..++.+.+.+.++.|.+.|++..
T Consensus        45 ~~~l~~~i~~~l~~L~~~~~I~~   67 (85)
T d2p6ra1          45 EISLSYELERVVRQLENWGMVVE   67 (85)
T ss_dssp             CCCCHHHHHHHHHHHHHTTSEEE
T ss_pred             hhcHHHHHHHHHHHHHHCCCccc
Confidence            34556677889999999999975


No 176
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=24.32  E-value=98  Score=20.85  Aligned_cols=34  Identities=9%  Similarity=0.205  Sum_probs=27.7

Q ss_pred             CCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEec
Q 012112          385 VDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLD  419 (471)
Q Consensus       385 i~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~  419 (471)
                      +..++++...|.+-. .+...+..|.++|++....
T Consensus        28 lt~~elA~~lg~sr~-tvsr~l~~l~~~g~I~~~~   61 (73)
T d1zyba1          28 VKMDDLARCLDDTRL-NISKTLNELQDNGLIELHR   61 (73)
T ss_dssp             CCHHHHHHHHTSCHH-HHHHHHHHHHHTTSCEEET
T ss_pred             cCHHHHHHHHCCCHH-HHHHHHHHHHHCCCEEecC
Confidence            677888888888854 5788999999999998644


No 177
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.30  E-value=56  Score=21.21  Aligned_cols=42  Identities=14%  Similarity=0.199  Sum_probs=33.5

Q ss_pred             HHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEE
Q 012112          374 VLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVI  416 (471)
Q Consensus       374 ~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~  416 (471)
                      .++..|..+..++..+++++.|.+.. .....+++|.+.|.+.
T Consensus         7 ~Il~~L~~n~r~s~~eiA~~l~ls~~-~v~~Ri~~L~~~giI~   48 (60)
T d2cyya1           7 KIIKILQNDGKAPLREISKITGLAES-TIHERIRKLRESGVIK   48 (60)
T ss_dssp             HHHHHHHHCTTCCHHHHHHHHCSCHH-HHHHHHHHHHHHTSSC
T ss_pred             HHHHHHHHcCCCCHHHHHHHHCcCHH-HHHHHHHHHHHCCCeE
Confidence            45555666667899999999999865 4667899999999885


No 178
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=23.95  E-value=69  Score=23.34  Aligned_cols=36  Identities=6%  Similarity=0.192  Sum_probs=28.5

Q ss_pred             CCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEec
Q 012112          384 GVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLD  419 (471)
Q Consensus       384 gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~  419 (471)
                      .+..++++...|.+-.+.+...|..|.++|+|....
T Consensus        31 ~lTqeeLA~~lG~s~ReTVsR~L~~L~~~GlI~~~~   66 (100)
T d2bgca1          31 NLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKN   66 (100)
T ss_dssp             CCCHHHHHHHTTCCCHHHHHHHHHHHHHTTSEEEET
T ss_pred             ccCHHHHHHHhCCchHHHHHHHHHHHHHCCCEEEcC
Confidence            356677777788765667788999999999998754


No 179
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}
Probab=23.70  E-value=36  Score=30.35  Aligned_cols=54  Identities=13%  Similarity=0.148  Sum_probs=33.2

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHH
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRT  239 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~  239 (471)
                      .+.++.|+..|+++|-+=  +.|+++|+++                +..|     +.+++|+|...+..+..+.+.+
T Consensus        16 ~~Vv~llks~~i~~VRlY--~~d~~vL~A~----------------~~~g-----i~v~lGv~n~~l~~~~~~~~~a   69 (306)
T d1ghsa_          16 SDVVQLYRSKGINGMRIY--FADGQALSAL----------------RNSG-----IGLILDIGNDQLANIAASTSNA   69 (306)
T ss_dssp             HHHHHHHHHHTCCEEEES--SCCHHHHHHT----------------TTSC-----CEEEEECCGGGHHHHHHCHHHH
T ss_pred             HHHHHHHHhCCCCEEEEe--CCCHHHHHHH----------------HhcC-----CEEEEEeccchhhhhccCHHHH
Confidence            466778888888887653  4455555433                2333     5588899877666655544443


No 180
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=23.51  E-value=1e+02  Score=26.45  Aligned_cols=15  Identities=13%  Similarity=0.096  Sum_probs=7.8

Q ss_pred             CCHHHHHHHHHHHHH
Q 012112          128 VPPRFVSSILDTLTD  142 (471)
Q Consensus       128 l~~~~l~~ll~~l~~  142 (471)
                      ++.+.++++++.+.+
T Consensus        19 iD~~~~~~~i~~l~~   33 (292)
T d2a6na1          19 VCRASLKKLIDYHVA   33 (292)
T ss_dssp             BCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHH
Confidence            355555555555543


No 181
>d2f5tx2 d.136.1.5 (X:110-246) Transcriptional regulator TrmB {Thermococcus litoralis [TaxId: 2265]}
Probab=23.18  E-value=36  Score=25.63  Aligned_cols=53  Identities=21%  Similarity=0.206  Sum_probs=37.7

Q ss_pred             CCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCCCcEEEEe
Q 012112          194 RAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQPKHVSVYD  251 (471)
Q Consensus       194 R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p~his~y~  251 (471)
                      |.|+.+++.+.++.--+.    +.-..|+--|++-.++++++|..+++-++. +|+|.
T Consensus         4 Rs~~~dEAIEM~rEsLe~----~e~EvIvvtP~eFF~~Ire~L~~~L~rGvT-lSlY~   56 (137)
T d2f5tx2           4 RSRSFDEAIEMFRESLYS----AKNEVIVVTPSEFFETIREDLIKTLERGVT-VSLYI   56 (137)
T ss_dssp             EESCHHHHHHHHHHHHHT----CSSEEEEEECGGGHHHHHHHHHHHHHTTCE-EEEEE
T ss_pred             ccccHHHHHHHHHHHHHh----ccceEEEEchHHHHHHHHHHHHHHHhcCcE-EEEEe
Confidence            456666555444433222    334567778999999999999999999975 88886


No 182
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=22.62  E-value=1.1e+02  Score=20.75  Aligned_cols=34  Identities=18%  Similarity=0.226  Sum_probs=25.7

Q ss_pred             CHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecC
Q 012112          386 DLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDE  420 (471)
Q Consensus       386 ~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~  420 (471)
                      +..++++.||.+-. .+.+++..|...|++....+
T Consensus        24 se~~La~~~~vSr~-tvr~Al~~L~~~Gli~~~~g   57 (78)
T d3bwga1          24 VLETLMAQFEVSKS-TITKSLELLEQKGAIFQVRG   57 (78)
T ss_dssp             CHHHHHHHTTCCHH-HHHHHHHHHHHTTSEEEETT
T ss_pred             CHHHHHHHHCCCHH-HHHHHHHHHHHCCcEEEEcC
Confidence            45566777777753 46788999999999987654


No 183
>d1sfua_ a.4.5.19 (A:) 34L {Yaba-like disease virus, YLDV [TaxId: 132475]}
Probab=22.51  E-value=1.1e+02  Score=20.83  Aligned_cols=47  Identities=11%  Similarity=0.044  Sum_probs=39.2

Q ss_pred             HHHHHhccccCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEecC
Q 012112          373 DVLMLSFRTARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLDE  420 (471)
Q Consensus       373 e~~~~~Lr~~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~~  420 (471)
                      ......|+..+++.-..+++++|.+- ..+...|-.|.++|.+...++
T Consensus        13 k~~l~~L~~~~~~tA~~LAk~Lg~~K-k~VNr~LY~L~~~G~v~~~~~   59 (70)
T d1sfua_          13 KKEVLSLNTNDYTTAISLSNRLKINK-KKINQQLYKLQKEDTVKMVPS   59 (70)
T ss_dssp             HHHHHTSCTTCEECHHHHHHHTTCCH-HHHHHHHHHHHHTTSEEEECC
T ss_pred             HHHHHhcCCCCCchHHHHHHHhCCCH-HHHHHHHHHHHHCCCeecCCC
Confidence            34567888888999999999999865 568889999999999987664


No 184
>d1oywa1 a.4.5.43 (A:407-516) DNA helicase RecQ DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=22.45  E-value=58  Score=24.04  Aligned_cols=36  Identities=11%  Similarity=-0.003  Sum_probs=27.1

Q ss_pred             HHHHHHHHHHHCCCEEEecCcccchhhhhhhhhhhhhhhcccccceeeecCchhhchHH
Q 012112          401 TLCKAYKPYIESGHVICLDEWRRAMNIEEFNSLLLDETKIGNRLAYFRLSDPEGFLLSN  459 (471)
Q Consensus       401 ~~~~~~~~~~~~gll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lt~~~G~~~~n  459 (471)
                      .+...+..|+..|+|..+.+.                      .+.+.+| ++|..+.+
T Consensus        62 ~w~~li~qLv~~g~L~~~~~~----------------------y~~l~lt-~~g~~~l~   97 (110)
T d1oywa1          62 HWVSVIRQLIHLGLVTQNIAQ----------------------HSALQLT-EAARPVLR   97 (110)
T ss_dssp             HHHHHHHHHHHTTSEEEEGGG----------------------TTEEEEC-GGGHHHHH
T ss_pred             HHHHHHHHHHHcCCceeccCc----------------------CCeEEEC-HHHHHHhC
Confidence            456789999999999864322                      2468997 99988765


No 185
>d1vpqa_ c.1.32.1 (A:) Hypothetical protein TM1631 {Thermotoga maritima [TaxId: 2336]}
Probab=22.28  E-value=80  Score=27.15  Aligned_cols=59  Identities=15%  Similarity=0.104  Sum_probs=40.2

Q ss_pred             eeEEEEcCCCCCC-CCHHHHHHHHHHHHHHcCCCCCcEEEEEe-cCCCCCHHHHHHHHHCCCCEEEE
Q 012112          115 LETVFFGGGTPSL-VPPRFVSSILDTLTDKFGLSLDAEISMEM-DPGTFDARKMEELMDLGVNRVSL  179 (471)
Q Consensus       115 v~~i~fGGGTps~-l~~~~l~~ll~~l~~~~~l~~~~eitiE~-~P~~l~~e~l~~l~~~Gvnrvsi  179 (471)
                      +..+.|.= -|++ .+++.++.|...+ +.++    ..+.+|. |+.-.+++..+.|++.|+..|..
T Consensus       109 lg~~L~Q~-Ppsf~~~~~~~~~L~~~~-~~~p----~~~AvE~Rh~sW~~~~~~~~L~~~~v~~V~~  169 (260)
T d1vpqa_         109 LKMTLAQF-PFSFKFSRKNVEYLEKLR-ESYP----YELAVEFRHYSWDREETYEFLRNHGITFVVV  169 (260)
T ss_dssp             EEEEEEEC-CTTCCCCHHHHHHHHHHH-HHCC----SCEEEECCBGGGCSHHHHHHHHHHTCEEEEE
T ss_pred             CCeEEEeC-CCCCCCCHHHHHHHHHHH-HhCC----cceEEEeCCchhccHHHHHHHHHcCCEEEEE
Confidence            45555541 2333 2567776654444 4444    3689999 77778999999999999998864


No 186
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=22.17  E-value=85  Score=21.84  Aligned_cols=37  Identities=11%  Similarity=0.064  Sum_probs=30.1

Q ss_pred             cCCCCHhhHHHHhCCChHHHHHHHHHHHHHCCCEEEec
Q 012112          382 ARGVDLKSFGETFGCSLVHTLCKAYKPYIESGHVICLD  419 (471)
Q Consensus       382 ~~gi~~~~~~~~fg~~~~~~~~~~~~~~~~~gll~~~~  419 (471)
                      ..+++.+++.++.|.+. +.+...++.+...|++....
T Consensus        32 ~gp~s~~eLA~~~g~~~-~~l~rlLr~l~a~gl~~e~~   68 (85)
T d1tw3a1          32 AGARTVKALAARTDTRP-EALLRLIRHLVAIGLLEEDA   68 (85)
T ss_dssp             TTCCBHHHHHHHHTCCH-HHHHHHHHHHHHTTSEEEEE
T ss_pred             cCCCCHHHHHHHhCcCh-hHHHHHHHHHHHCCCeEecC
Confidence            35699999999999985 45677899999999997543


No 187
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]}
Probab=22.07  E-value=1.1e+02  Score=26.70  Aligned_cols=68  Identities=7%  Similarity=-0.085  Sum_probs=42.8

Q ss_pred             CCHHHHHHHHHHHHhCCCCcEEEEeccccCCChhh--hcccCCCCCCCCHHHHHHHHHHHHHHHHHCCCcee
Q 012112          227 QTPQMWEESLRRTVGAQPKHVSVYDLQVEQGTKFG--ILYTPGEFPLPTETQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       227 qT~e~~~~~l~~~~~l~p~his~y~l~~~pgT~l~--~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      -+.+.++++|+.+.+++.+.|.++...........  .....+. ... .+...+.++.+.+.+.++|....
T Consensus        38 ~~~~~~~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~-g~~-de~gl~~~d~~l~~a~~~Gi~vi  107 (410)
T d1uuqa_          38 GDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF-GNY-DETLLQGLDYLLVELAKRDMTVV  107 (410)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSST-TCB-CHHHHHHHHHHHHHHHHTTCEEE
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEeCCcccccccccccCCCccccc-ccc-cHHHHHHHHHHHHHHHHcCCeeE
Confidence            46788888899999999998888766443322211  1111111 111 24456668888899999997754


No 188
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=21.80  E-value=1.7e+02  Score=25.30  Aligned_cols=22  Identities=9%  Similarity=0.138  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHHHHHHCCCcee
Q 012112          275 TQSANFYRMASSMLSSAGYRHY  296 (471)
Q Consensus       275 ~~~~~~~~~~~~~L~~~Gy~~y  296 (471)
                      ++..+.+....+.+.++|..+.
T Consensus       159 ~~v~~~~~~~~~~~~~~GI~~~  180 (282)
T d1ajza_         159 AEVNRYFIEQIARCEQAGIAKE  180 (282)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCGG
T ss_pred             hhhHHHHHHHHHHHHHcCCcHh
Confidence            5566778888888999998543


No 189
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]}
Probab=21.78  E-value=20  Score=32.26  Aligned_cols=48  Identities=10%  Similarity=0.174  Sum_probs=28.6

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHH
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWE  233 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~  233 (471)
                      .+.++.|+..|+++|-+=  +.|+++|++                ++..|     +.+|+|+|.+....+.
T Consensus        16 ~~vv~lLk~~~i~~IRlY--~~d~~vL~A----------------~~~tg-----i~v~lGv~n~~l~~~~   63 (312)
T d2cyga1          16 SEVVSLYKSNNIARMRLY--DPNQAALQA----------------LRNSN-----IQVLLDVPRSDVQSLA   63 (312)
T ss_dssp             HHHHHHHHHTTCCEEEES--SCCHHHHHH----------------HTTSC-----CEEEEEECHHHHHHHH
T ss_pred             HHHHHHHHhCCCCEEEEe--CCCHHHHHH----------------HHhcC-----CEEEEeeccchhhhcc
Confidence            467778888888887543  345544432                22333     4578888865444443


No 190
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=21.60  E-value=1.5e+02  Score=25.28  Aligned_cols=50  Identities=8%  Similarity=0.039  Sum_probs=30.4

Q ss_pred             CCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          128 VPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       128 l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      .++....+++...|-.+   ++..+.+-+.-.++..+.-+..-.+|+|.+.+|
T Consensus       235 ~~~~e~l~~iA~~Rl~l---p~~~i~i~~~~~~~~~~~~~~~L~~Gan~~~~~  284 (312)
T d1r30a_         235 VDAFDFIRTIAVARIMM---PTSYVRLSAGREQMNEQTQAMCFMAGANSIFYG  284 (312)
T ss_dssp             CCHHHHHHHHHHHHHHC---TTSEEEEESSGGGSCHHHHHHHHHHTCCEEECS
T ss_pred             CCHHHHHHHHHHHHHhC---CCcceEEEechhhcCHHHHHHHHhcCCcEEEec
Confidence            35556666665555443   345677766444566666666667788866655


No 191
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=21.51  E-value=16  Score=31.27  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=23.3

Q ss_pred             EEEEecCCCCCHHHHHHHHHCCCCEEEEc
Q 012112          152 ISMEMDPGTFDARKMEELMDLGVNRVSLG  180 (471)
Q Consensus       152 itiE~~P~~l~~e~l~~l~~~GvnrvsiG  180 (471)
                      +.+++. +.++.+.+..++++|++.+-.|
T Consensus       169 ~~I~VD-GGIn~~~i~~l~~aGad~~V~G  196 (220)
T d1h1ya_         169 LDIEVD-GGLGPSTIDVAASAGANCIVAG  196 (220)
T ss_dssp             SEEEEE-SSCSTTTHHHHHHHTCCEEEES
T ss_pred             ceEEEE-ecCCHHHHHHHHHCCCCEEEEC
Confidence            345554 4689999999999999999998


No 192
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]}
Probab=21.38  E-value=1.5e+02  Score=25.39  Aligned_cols=50  Identities=18%  Similarity=0.216  Sum_probs=35.3

Q ss_pred             CHHHHHHHHHCCCCEEEEccCCCCHH---------HHHHcCCCCCHHHHHHHHHHHHHc
Q 012112          162 DARKMEELMDLGVNRVSLGVQAFQDE---------LLKSCGRAHGLKEVYEAIEIVKLC  211 (471)
Q Consensus       162 ~~e~l~~l~~~GvnrvsiGvQS~~d~---------~L~~l~R~~t~~~~~~ai~~~~~~  211 (471)
                      +.+.++.|.++|++-|.+|+=.-||-         ..+++..+.+.+++.+.++.+++.
T Consensus        33 ~~~~l~~l~~~G~DiiElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r~~   91 (261)
T d1rd5a_          33 TAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE   91 (261)
T ss_dssp             HHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHcCCCEEEECCCCCCcCcCCcceeeeeeeccccCcchhhhhhhhhccccc
Confidence            45666777778888888887665542         345677788888888888777654


No 193
>d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.15  E-value=72  Score=27.19  Aligned_cols=51  Identities=10%  Similarity=0.007  Sum_probs=31.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCcEEEEEecCCCCCHHHHHHHHHCCCCEEEEccCCCCHHHH
Q 012112          131 RFVSSILDTLTDKFGLSLDAEISMEMDPGTFDARKMEELMDLGVNRVSLGVQAFQDELL  189 (471)
Q Consensus       131 ~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l~~e~l~~l~~~GvnrvsiGvQS~~d~~L  189 (471)
                      +.+.+=++.+++.|+-....-..+-+||   +...++.+++.|+     |++..+...+
T Consensus         3 ~~lr~~~~~~~~af~~~~~i~YA~KaN~---~~~vl~~l~~~G~-----g~dvaS~~El   53 (265)
T d1hkva2           3 DDFRSRCRETAAAFGSGANVHYAAKAFL---CSEVARWISEEGL-----CLDVCTGGEL   53 (265)
T ss_dssp             HHHHHHHHHHHHHTTSGGGBEEEGGGSC---CHHHHHHHHHHTC-----EEEECSHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEeccCC---CHHHHHHHHHcCC-----CeEEeChhhH
Confidence            4455556667777752222233444566   6899999999985     5666555544


No 194
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]}
Probab=20.73  E-value=40  Score=31.53  Aligned_cols=52  Identities=8%  Similarity=0.006  Sum_probs=37.7

Q ss_pred             HHHHHHHHHCCCCEEEEccCCCCHHHHHH-cCCCCCHHHHHHHHHHHHHcCCCeeEe
Q 012112          163 ARKMEELMDLGVNRVSLGVQAFQDELLKS-CGRAHGLKEVYEAIEIVKLCGVENWSL  218 (471)
Q Consensus       163 ~e~l~~l~~~GvnrvsiGvQS~~d~~L~~-l~R~~t~~~~~~ai~~~~~~G~~~v~~  218 (471)
                      ++.|+.||++||+-|.++|=   =-+.+. --+..+..-..+.+++++++|++ |.+
T Consensus        32 ~~~L~~LK~aGV~gV~vdVw---WGivE~~~Pg~Ydws~yd~l~~mv~~~GLK-i~v   84 (417)
T d1vema2          32 ENDLRWAKQNGFYAITVDFW---WGDMEKNGDQQFDFSYAQRFAQSVKNAGMK-MIP   84 (417)
T ss_dssp             HHHHHHHHHTTEEEEEEEEE---HHHHTCSSTTCCCCHHHHHHHHHHHHTTCE-EEE
T ss_pred             HHHHHHHHHcCCCEEEEeee---eeeeecCCCCccCcHHHHHHHHHHHHcCCe-EEE
Confidence            46789999999999999752   111221 12457889999999999999987 444


No 195
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.61  E-value=2.4e+02  Score=23.92  Aligned_cols=98  Identities=11%  Similarity=0.109  Sum_probs=63.4

Q ss_pred             eeEEEEcCCC--CCCCCHHHHHHHHHHHHHHcCCCCCcEEEEEecCCCC--CHHHHHHHHHCCCCEEEEccCCCCHHHHH
Q 012112          115 LETVFFGGGT--PSLVPPRFVSSILDTLTDKFGLSLDAEISMEMDPGTF--DARKMEELMDLGVNRVSLGVQAFQDELLK  190 (471)
Q Consensus       115 v~~i~fGGGT--ps~l~~~~l~~ll~~l~~~~~l~~~~eitiE~~P~~l--~~e~l~~l~~~GvnrvsiGvQS~~d~~L~  190 (471)
                      ++.++++|.|  ...|+.++-.++++.+.+..+  ....+-+-+...+.  +-+..+..+++|++-+-+..-.+.     
T Consensus        42 v~Gi~v~G~tGE~~~Ls~eEr~~l~~~~~~~~~--~~~~vi~g~~~~s~~~~i~~a~~a~~~Gad~v~i~~P~~~-----  114 (296)
T d1xxxa1          42 CDGLVVSGTTGESPTTTDGEKIELLRAVLEAVG--DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYS-----  114 (296)
T ss_dssp             CSEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT--TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSS-----
T ss_pred             CCEEEECeeccchhhCCHHHHHHHHHHHHHHhc--cccceEeccccchhHHHHHHHHHHHHhcCCeEEEEeccCC-----
Confidence            7889998766  566799988899888877653  33445444422222  346677777889999888766653     


Q ss_pred             HcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCC
Q 012112          191 SCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPH  226 (471)
Q Consensus       191 ~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPg  226 (471)
                          ..+.+++.+-.+.+.++ .+ +.+ +||..|+
T Consensus       115 ----~~~~~~l~~~~~~v~~~-~~-~pi-~lYn~p~  143 (296)
T d1xxxa1         115 ----KPPQRGLQAHFTAVADA-TE-LPM-LLYDIPG  143 (296)
T ss_dssp             ----CCCHHHHHHHHHHHHTT-CS-SCE-EEEECHH
T ss_pred             ----CCCHHHHHHHHHHHHHh-cC-CCE-EEEECcc
Confidence                24567777777777665 22 333 4666663


No 196
>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}
Probab=20.29  E-value=2.3e+02  Score=23.68  Aligned_cols=138  Identities=17%  Similarity=0.121  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHHhccCCCCCCCCeeEEEEc--CCCCCCCCHHHHHHHHHHH--HHHcCCCCCcEEEEEecCCCCCHHHH
Q 012112           91 VSNYIQLLCREIIATKPGHKTSPPLETVFFG--GGTPSLVPPRFVSSILDTL--TDKFGLSLDAEISMEMDPGTFDARKM  166 (471)
Q Consensus        91 ~~~yv~~l~~Ei~~~~~~~~~~~~v~~i~fG--GGTps~l~~~~l~~ll~~l--~~~~~l~~~~eitiE~~P~~l~~e~l  166 (471)
                      .+...+.+.+||......    ..+....+|  |.......+.+.+.+-..+  ....++    .+.+-++...-..+.+
T Consensus        97 ~~~~~~~~~~~i~~~~~~----~~~~~~~IGe~g~d~~~~~~~q~~~f~~~~~~A~~~~l----Pv~iH~r~~~~~~e~~  168 (291)
T d1bf6a_          97 VQELAQEMVDEIEQGIDG----TELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGR----PISTHTSFSTMGLEQL  168 (291)
T ss_dssp             HHHHHHHHHHHHHTCSTT----SSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCC----CEEEECGGGCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhc----cCceEEEEEeeccccCCCCHHHHHHHHHHHHHHHHhCC----CeEEeccchhhhHHHH
Confidence            455667777888755432    223334443  2111112344433222222  223343    4666665433445889


Q ss_pred             HHHHHCCCCEEEEccCCCCHHHHHHcCCCCCHHHHHHHHHHHHHcCCCeeEeeeecCCCCCCHHHHHHHHHHHHhCCC-C
Q 012112          167 EELMDLGVNRVSLGVQAFQDELLKSCGRAHGLKEVYEAIEIVKLCGVENWSLDLISSLPHQTPQMWEESLRRTVGAQP-K  245 (471)
Q Consensus       167 ~~l~~~GvnrvsiGvQS~~d~~L~~l~R~~t~~~~~~ai~~~~~~G~~~v~~DlI~GlPgqT~e~~~~~l~~~~~l~p-~  245 (471)
                      ..|.+.|++--.+++=..        +...+.+.    ++.+.+.|+- |++|-+..+...+.+...+.++.+++..| +
T Consensus       169 ~~l~~~~~~~~~~~~~H~--------~f~~~~e~----~~~~~~~G~~-i~~~g~~~~~~~~~~~~~~~~~~lv~~~p~d  235 (291)
T d1bf6a_         169 ALLQAHGVDLSRVTVGHC--------DLKDNLDN----ILKMIDLGAY-VQFDTIGKNSYYPDEKRIAMLHALRDRGLLN  235 (291)
T ss_dssp             HHHHHTTCCGGGEEECCC--------CSSCCHHH----HHHHHHTTCE-EEECCTTCTTTSCHHHHHHHHHHHHHTTCGG
T ss_pred             HHHHHhCCCcccceeccc--------CCCCCHHH----HHHHHhcCee-EEecccccccCCcHHHhHHHHHHHHHhCCch
Confidence            999999986433333111        12233433    3444566885 99997777655566666666777776654 8


Q ss_pred             cEEE
Q 012112          246 HVSV  249 (471)
Q Consensus       246 his~  249 (471)
                      +|-+
T Consensus       236 rill  239 (291)
T d1bf6a_         236 RVML  239 (291)
T ss_dssp             GEEE
T ss_pred             hEEE
Confidence            7755


Done!